Miyakogusa Predicted Gene

Lj1g3v4862710.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4862710.1 Non Chatacterized Hit- tr|J9K7Q5|J9K7Q5_ACYPI
Uncharacterized protein OS=Acyrthosiphon pisum PE=4
SV,31.06,3e-19,SUBFAMILY NOT NAMED,NULL;
UNCHARACTERIZED,NULL,CUFF.33455.1
         (185 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G02030.2 | Symbols:  | Vps51/Vps67 family (components of vesi...   270   4e-73
AT4G02030.1 | Symbols:  | Vps51/Vps67 family (components of vesi...   270   4e-73

>AT4G02030.2 | Symbols:  | Vps51/Vps67 family (components of
           vesicular transport) protein | chr4:892262-897175
           FORWARD LENGTH=805
          Length = 805

 Score =  270 bits (691), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 136/189 (71%), Positives = 159/189 (84%), Gaps = 5/189 (2%)

Query: 1   MLVDLFLQELEVIGNEVKEILPQG-IRKHHRVDSTGSNAS-STRSNSFREEKLTRSNTLK 58
           M VD+FL ELE +G EVK++LPQG  RKH R DS GSN + S+RSN+   +K+ RSN+ +
Sbjct: 618 MYVDMFLHELEEVGKEVKQVLPQGTFRKHKRTDSNGSNTTTSSRSNTLHNDKMARSNSQR 677

Query: 59  GRSQQLLETHLAKLFKQKVEIFTKVEYTQESVIMTIVKLCLKSLQEFVRFQTFNRSGFQQ 118
            RSQ L ETHLAKLFKQKVEIFTKVE+TQESV+ T VKLCLKSLQE+VR QTFNRSGFQQ
Sbjct: 678 ARSQ-LFETHLAKLFKQKVEIFTKVEFTQESVVTTTVKLCLKSLQEYVRLQTFNRSGFQQ 736

Query: 119 IQLDIQFLRTPIKEIVEDEAAMDFLLDEVIVAATERCLDPISLEPPILERLIGAKLAKTK 178
           IQLDIQFL+ P+KE VEDEAA+DFLLDEVIVAA+ERCLD I LEPPIL++LI AKLAK+K
Sbjct: 737 IQLDIQFLKAPLKEAVEDEAAIDFLLDEVIVAASERCLDVIPLEPPILDKLIQAKLAKSK 796

Query: 179 EQ--DTISS 185
           E   +T+SS
Sbjct: 797 EHNNNTVSS 805


>AT4G02030.1 | Symbols:  | Vps51/Vps67 family (components of
           vesicular transport) protein | chr4:892262-897175
           FORWARD LENGTH=780
          Length = 780

 Score =  270 bits (690), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 136/189 (71%), Positives = 159/189 (84%), Gaps = 5/189 (2%)

Query: 1   MLVDLFLQELEVIGNEVKEILPQG-IRKHHRVDSTGSNAS-STRSNSFREEKLTRSNTLK 58
           M VD+FL ELE +G EVK++LPQG  RKH R DS GSN + S+RSN+   +K+ RSN+ +
Sbjct: 593 MYVDMFLHELEEVGKEVKQVLPQGTFRKHKRTDSNGSNTTTSSRSNTLHNDKMARSNSQR 652

Query: 59  GRSQQLLETHLAKLFKQKVEIFTKVEYTQESVIMTIVKLCLKSLQEFVRFQTFNRSGFQQ 118
            RSQ L ETHLAKLFKQKVEIFTKVE+TQESV+ T VKLCLKSLQE+VR QTFNRSGFQQ
Sbjct: 653 ARSQ-LFETHLAKLFKQKVEIFTKVEFTQESVVTTTVKLCLKSLQEYVRLQTFNRSGFQQ 711

Query: 119 IQLDIQFLRTPIKEIVEDEAAMDFLLDEVIVAATERCLDPISLEPPILERLIGAKLAKTK 178
           IQLDIQFL+ P+KE VEDEAA+DFLLDEVIVAA+ERCLD I LEPPIL++LI AKLAK+K
Sbjct: 712 IQLDIQFLKAPLKEAVEDEAAIDFLLDEVIVAASERCLDVIPLEPPILDKLIQAKLAKSK 771

Query: 179 EQ--DTISS 185
           E   +T+SS
Sbjct: 772 EHNNNTVSS 780