Miyakogusa Predicted Gene
- Lj1g3v4848440.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v4848440.1 tr|G7KTM4|G7KTM4_MEDTR DEAD-box ATP-dependent RNA
helicase OS=Medicago truncatula GN=MTR_7g109720 PE,89.77,0,seg,NULL;
DEAD-like helicases superfamily,Helicase, superfamily 1/2, ATP-binding
domain; helicase su,CUFF.33437.1
(704 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G47330.1 | Symbols: | P-loop containing nucleoside triphosph... 913 0.0
AT5G63120.2 | Symbols: | P-loop containing nucleoside triphosph... 424 e-118
AT1G20920.1 | Symbols: | P-loop containing nucleoside triphosph... 417 e-117
AT1G20920.2 | Symbols: | P-loop containing nucleoside triphosph... 417 e-116
AT1G55150.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 412 e-115
AT3G09620.1 | Symbols: | P-loop containing nucleoside triphosph... 388 e-108
AT5G63120.1 | Symbols: | P-loop containing nucleoside triphosph... 359 5e-99
AT3G06480.1 | Symbols: | DEAD box RNA helicase family protein |... 333 3e-91
AT5G14610.2 | Symbols: | DEAD box RNA helicase family protein |... 331 1e-90
AT3G01540.4 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 | ... 325 7e-89
AT3G01540.3 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 | ... 325 7e-89
AT3G01540.2 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 | ... 325 7e-89
AT3G01540.1 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 | ... 325 7e-89
AT2G33730.1 | Symbols: | P-loop containing nucleoside triphosph... 318 1e-86
AT2G42520.1 | Symbols: | P-loop containing nucleoside triphosph... 315 1e-85
AT3G58510.3 | Symbols: | DEA(D/H)-box RNA helicase family prote... 314 1e-85
AT3G58510.2 | Symbols: | DEA(D/H)-box RNA helicase family prote... 314 1e-85
AT3G58510.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 314 1e-85
AT5G51280.1 | Symbols: | DEAD-box protein abstrakt, putative | ... 307 1e-83
AT3G58570.1 | Symbols: | P-loop containing nucleoside triphosph... 305 6e-83
AT5G14610.1 | Symbols: | DEAD box RNA helicase family protein |... 305 8e-83
AT4G33370.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 305 9e-83
AT1G31970.1 | Symbols: STRS1 | DEA(D/H)-box RNA helicase family ... 285 8e-77
AT1G28180.1 | Symbols: | P-loop containing nucleoside triphosph... 247 2e-65
AT3G09720.1 | Symbols: | P-loop containing nucleoside triphosph... 238 2e-62
AT1G77030.1 | Symbols: | hydrolases, acting on acid anhydrides,... 226 5e-59
AT3G22330.1 | Symbols: PMH2, ATRH53 | putative mitochondrial RNA... 219 4e-57
AT5G60990.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 218 1e-56
AT4G16630.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 217 2e-56
AT3G22310.1 | Symbols: PMH1, ATRH9 | putative mitochondrial RNA ... 216 5e-56
AT5G26742.2 | Symbols: emb1138 | DEAD box RNA helicase (RH3) | c... 214 2e-55
AT5G26742.1 | Symbols: emb1138 | DEAD box RNA helicase (RH3) | c... 214 2e-55
AT3G13920.1 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translat... 212 7e-55
AT3G13920.3 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translat... 212 7e-55
AT3G13920.2 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translat... 212 7e-55
AT3G02065.3 | Symbols: | P-loop containing nucleoside triphosph... 212 8e-55
AT3G02065.2 | Symbols: | P-loop containing nucleoside triphosph... 212 8e-55
AT1G54270.1 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-2026201... 211 1e-54
AT3G19760.1 | Symbols: EIF4A-III | eukaryotic initiation factor ... 210 2e-54
AT1G51380.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 208 8e-54
AT1G16280.1 | Symbols: RH36, AtRH36, SWA3 | RNA helicase 36 | ch... 207 1e-53
AT5G26742.3 | Symbols: emb1138 | DEAD box RNA helicase (RH3) | c... 207 1e-53
AT3G13920.4 | Symbols: EIF4A1 | eukaryotic translation initiatio... 207 2e-53
AT1G54270.2 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-2026201... 207 3e-53
AT1G72730.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 202 9e-52
AT4G00660.1 | Symbols: RH8, ATRH8 | RNAhelicase-like 8 | chr4:27... 192 9e-49
AT4G00660.2 | Symbols: RH8, ATRH8 | RNAhelicase-like 8 | chr4:27... 192 9e-49
AT5G62190.1 | Symbols: PRH75 | DEAD box RNA helicase (PRH75) | c... 186 5e-47
AT5G65900.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 186 7e-47
AT5G08610.1 | Symbols: | P-loop containing nucleoside triphosph... 182 1e-45
AT3G18600.1 | Symbols: | P-loop containing nucleoside triphosph... 181 2e-45
AT2G45810.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 179 8e-45
AT3G61240.2 | Symbols: | DEA(D/H)-box RNA helicase family prote... 178 1e-44
AT3G61240.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 178 1e-44
AT5G63630.1 | Symbols: | P-loop containing nucleoside triphosph... 175 1e-43
AT4G34910.1 | Symbols: | P-loop containing nucleoside triphosph... 171 1e-42
AT2G07750.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 170 3e-42
AT1G71370.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 170 3e-42
AT1G63250.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 170 4e-42
AT5G08620.1 | Symbols: STRS2, ATRH25 | DEA(D/H)-box RNA helicase... 167 2e-41
AT3G02065.1 | Symbols: | P-loop containing nucleoside triphosph... 167 2e-41
AT5G11170.1 | Symbols: | DEAD/DEAH box RNA helicase family prot... 167 3e-41
AT5G11200.1 | Symbols: | DEAD/DEAH box RNA helicase family prot... 167 3e-41
AT5G05450.1 | Symbols: | P-loop containing nucleoside triphosph... 166 4e-41
AT1G12770.1 | Symbols: ISE1, EMB1586 | P-loop containing nucleos... 165 1e-40
AT3G53110.1 | Symbols: LOS4 | P-loop containing nucleoside triph... 163 3e-40
AT5G54910.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 163 5e-40
AT4G09730.1 | Symbols: RH39 | RH39 | chr4:6136333-6139510 FORWAR... 161 2e-39
AT3G16840.1 | Symbols: | P-loop containing nucleoside triphosph... 152 6e-37
AT5G11170.2 | Symbols: | DEAD/DEAH box RNA helicase family prot... 142 6e-34
AT3G06980.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 139 5e-33
AT1G71280.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 137 2e-32
AT2G40700.1 | Symbols: | P-loop containing nucleoside triphosph... 129 9e-30
AT5G11200.3 | Symbols: | DEAD/DEAH box RNA helicase family prot... 118 2e-26
AT5G11200.2 | Symbols: | DEAD/DEAH box RNA helicase family prot... 108 1e-23
AT4G15850.1 | Symbols: ATRH1, RH1 | RNA helicase 1 | chr4:900142... 105 9e-23
AT5G19210.2 | Symbols: | P-loop containing nucleoside triphosph... 103 4e-22
AT1G59990.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 82 1e-15
AT2G28600.1 | Symbols: | P-loop containing nucleoside triphosph... 64 4e-10
AT4G35740.1 | Symbols: RecQl3, ATRECQ3 | DEAD/DEAH box RNA helic... 61 2e-09
AT5G19210.1 | Symbols: | P-loop containing nucleoside triphosph... 60 7e-09
AT4G35740.2 | Symbols: RecQl3, ATRECQ3 | DEAD/DEAH box RNA helic... 54 5e-07
AT1G35530.2 | Symbols: | DEAD/DEAH box RNA helicase family prot... 52 1e-06
AT1G35530.1 | Symbols: | DEAD/DEAH box RNA helicase family prot... 52 1e-06
>AT2G47330.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:19429083-19431617
REVERSE LENGTH=760
Length = 760
Score = 913 bits (2359), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 460/628 (73%), Positives = 515/628 (82%), Gaps = 11/628 (1%)
Query: 66 PMESFLKAKKDLGLTLASDALHAGYDSDEEVYAAAKAVDAGMVEYDSDDNPIVIDKKKIE 125
P+ES+LKAKKDLGLTLA+DAL+AGY+SDEEVYAAAKAVDAGM++YDSDDNPIV+DK+KIE
Sbjct: 114 PVESYLKAKKDLGLTLAADALNAGYNSDEEVYAAAKAVDAGMLDYDSDDNPIVVDKRKIE 173
Query: 126 PIPPLDHSSVDYEPFSKDFYEEPPSISGMSEQDVTDYRKSLAIRVSGFDVPKPVKTFEDC 185
PI LDHSS+DYEP +KDFYEE SISGM+EQ+ TDYR+ L IRVSGFDV +PVKTFEDC
Sbjct: 174 PITALDHSSIDYEPINKDFYEELESISGMTEQETTDYRQRLGIRVSGFDVHRPVKTFEDC 233
Query: 186 GFPPPVMSAIKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQ 245
GF +MSAIKKQ YEKPT+IQCQALP+VLSGRD+IGIAKTGSGKTAAFVLPMIVHIMDQ
Sbjct: 234 GFSSQIMSAIKKQAYEKPTAIQCQALPIVLSGRDVIGIAKTGSGKTAAFVLPMIVHIMDQ 293
Query: 246 PELQKEEGPIGVICAPTRELAQQIYLESKKFAKSYGIRVSAVYGGMSKLEQFKELKAGCE 305
PELQ++EGPIGVICAPTRELA QI+LE+KKF+K+YG+RVSAVYGGMSK EQFKELKAGCE
Sbjct: 294 PELQRDEGPIGVICAPTRELAHQIFLEAKKFSKAYGLRVSAVYGGMSKHEQFKELKAGCE 353
Query: 306 IVVATPGRLIDMLKMKALTMTRATYLVLDEADRMFDLGFEPQVRSIVGQIRPDRQTSLFS 365
IVVATPGRLIDMLKMKALTM RA+YLVLDEADRMFDLGFEPQVRSIVGQIRPDRQT LFS
Sbjct: 354 IVVATPGRLIDMLKMKALTMMRASYLVLDEADRMFDLGFEPQVRSIVGQIRPDRQTLLFS 413
Query: 366 ATMPRKVEKLAREILSDPVRVIVGEVGMANEDITQVVQVVPSDSXXXXXXXXXXXXTIDQ 425
ATMP KVEKLAREILSDP+RV VGEVGMANEDITQVV V+PSD+ ID+
Sbjct: 414 ATMPWKVEKLAREILSDPIRVTVGEVGMANEDITQVVNVIPSDAEKLPWLLEKLPGMIDE 473
Query: 426 GDTLVFASKKATVDDIETQLSQRGFKVAALHGDKDQASRMDILQKFKSGVYHVLIATDVA 485
GD LVFASKKATVD+IE QL+ FKVAALHGDKDQASRM+ LQKFKSGV+HVLIATDVA
Sbjct: 474 GDVLVFASKKATVDEIEAQLTLNSFKVAALHGDKDQASRMETLQKFKSGVHHVLIATDVA 533
Query: 486 ARGLDIKSIKTVVNFDIAKDMDMHVHRIGRTGRAGDKEGVAYTLITQKEARFAGELVNSL 545
ARGLDIKS+KTVVN+DIAKDMDMHVHRIGRTGRAGD++GVAYTL+TQ+EARFAGELVNSL
Sbjct: 534 ARGLDIKSLKTVVNYDIAKDMDMHVHRIGRTGRAGDRDGVAYTLVTQREARFAGELVNSL 593
Query: 546 IAAGQNVSTELMDLAMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFGLGIGY-N 604
+AAGQNV EL DLAM FGLGIG+ +
Sbjct: 594 VAAGQNVPPELTDLAM---KDGRFKSKRDGRKGGKKGRGGGGGNKGVRGVDFGLGIGFSS 650
Query: 605 SESSSTPPNTAPSRSAAVNSLRTGMMSQFKSSFVAAXXXXXXXXXXXXXXMAANKRPTLA 664
S + APSRS A+NS+RTG+M+QFK+SFVAA NKRP+L
Sbjct: 651 ESSRTPSSKAAPSRSGAINSVRTGVMAQFKNSFVAATPSNPQNQAY------PNKRPSLM 704
Query: 665 GFVSGGSIGGDINRRQFVA-STSPAQSA 691
GFVSGG+IGGD+ R Q A +P Q+A
Sbjct: 705 GFVSGGTIGGDMGRTQSQAPPVAPTQNA 732
>AT5G63120.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:25318967-25322071
REVERSE LENGTH=591
Length = 591
Score = 424 bits (1089), Expect = e-118, Method: Compositional matrix adjust.
Identities = 214/421 (50%), Positives = 278/421 (66%), Gaps = 3/421 (0%)
Query: 140 FSKDFYEEPPSISGMSEQDVTDYRKSLAIRVSGFDVPKPVKTFEDCGFPPPVMSAIKKQG 199
F K+FY E P++ M+EQDV YR I V G DVPKP+K F+D FP ++ AI K G
Sbjct: 125 FEKNFYVESPTVQAMTEQDVAMYRTERDISVEGRDVPKPMKMFQDANFPDNILEAIAKLG 184
Query: 200 YEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELQKEEGPIGVIC 259
+ +PT IQ Q P+ L GRD+IGIA+TGSGKT A++LP +VH+ QP L +++GPI +I
Sbjct: 185 FTEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPALVHVSAQPRLGQDDGPIVLIL 244
Query: 260 APTRELAQQIYLESKKFAKSYGIRVSAVYGGMSKLEQFKELKAGCEIVVATPGRLIDMLK 319
APTRELA QI ES+KF G+R + +YGG K Q ++L+ G EIV+ATPGRLIDML+
Sbjct: 245 APTRELAVQIQEESRKFGLRSGVRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLE 304
Query: 320 MKALTMTRATYLVLDEADRMFDLGFEPQVRSIVGQIRPDRQTSLFSATMPRKVEKLAREI 379
+ + R TYLVLDEADRM D+GFEPQ+R IV QIRPDRQT L+SAT PR+VE LAR+
Sbjct: 305 CQHTNLKRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLLWSATWPREVETLARQF 364
Query: 380 LSDPVRVIVGEVGM-ANEDITQVVQVVPSDSXXXXXXXXXXXXTIDQGDTLVFASKKATV 438
L DP + I+G + AN+ I QV+++VP+ +D L+F K
Sbjct: 365 LRDPYKAIIGSTDLKANQSINQVIEIVPT-PEKYNRLLTLLKQLMDGSKILIFVETKRGC 423
Query: 439 DDIETQLSQRGFKVAALHGDKDQASRMDILQKFKSGVYHVLIATDVAARGLDIKSIKTVV 498
D + QL G+ A+HGDK Q+ R +L +FKSG ++ ATDVAARGLD+K IK VV
Sbjct: 424 DQVTRQLRMDGWPALAIHGDKTQSERDRVLAEFKSGRSPIMTATDVAARGLDVKDIKCVV 483
Query: 499 NFDIAKDMDMHVHRIGRTGRAGDKEGVAYTLITQKEARFAGELVNSLIAAGQNVSTELMD 558
N+D ++ ++HRIGRTGRAG K G+A+T T A+FA ELV L AGQ V L
Sbjct: 484 NYDFPNTLEDYIHRIGRTGRAGAK-GMAFTFFTHDNAKFARELVKILQEAGQVVPPTLSA 542
Query: 559 L 559
L
Sbjct: 543 L 543
>AT1G20920.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:7285342-7288842
FORWARD LENGTH=1166
Length = 1166
Score = 417 bits (1073), Expect = e-117, Method: Compositional matrix adjust.
Identities = 213/445 (47%), Positives = 292/445 (65%), Gaps = 5/445 (1%)
Query: 119 IDKKKIEPIPPLDHSSVDYEPFSKDFYEEPPSISGMSEQDVTDYRKSLAIRVSGFDVPKP 178
+ K K E + +DHS ++YEPF K+FY E IS M++++V YRK L ++V G DVP+P
Sbjct: 468 VKKTKAEKLSLVDHSKIEYEPFRKNFYIEVKDISRMTQEEVNTYRKELELKVHGKDVPRP 527
Query: 179 VKTFEDCGFPPPVMSAIKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLPM 238
+K + G ++ +KK YEKP IQ QALP+++SGRD IG+AKTGSGKT FVLPM
Sbjct: 528 IKFWHQTGLTSKILDTMKKLNYEKPMPIQTQALPIIMSGRDCIGVAKTGSGKTLGFVLPM 587
Query: 239 IVHIMDQPELQKEEGPIGVICAPTRELAQQIYLESKKFAKSYGIRVSAVYGGMSKLEQFK 298
+ HI DQP ++ +GPIG++ APTREL QQI+ + +KF+K GIR VYGG +Q
Sbjct: 588 LRHIKDQPPVEAGDGPIGLVMAPTRELVQQIHSDIRKFSKPLGIRCVPVYGGSGVAQQIS 647
Query: 299 ELKAGCEIVVATPGRLIDMLKM---KALTMTRATYLVLDEADRMFDLGFEPQVRSIVGQI 355
ELK G EIVV TPGR+ID+L K + R T+LV+DEADRMFD+GFEPQ+ I+ I
Sbjct: 648 ELKRGTEIVVCTPGRMIDILCTSSGKITNLRRVTFLVMDEADRMFDMGFEPQITRIIQNI 707
Query: 356 RPDRQTSLFSATMPRKVEKLAREILSDPVRVIVGEVGMANEDITQVVQVVPSDSXXXXXX 415
RP+RQT LFSAT PR+VE LAR++L+ PV + VG + N+DITQ+V+V P +S
Sbjct: 708 RPERQTVLFSATFPRQVETLARKVLNKPVEIQVGGRSVVNKDITQLVEVRP-ESDRFLRL 766
Query: 416 XXXXXXTIDQGDTLVFASKKATVDDIETQLSQRGFKVAALHGDKDQASRMDILQKFKSGV 475
++G LVF + D + + + + +LHG KDQ R + FK+ V
Sbjct: 767 LELLGEWSEKGKILVFVQSQEKCDALYRDMIKSSYPCLSLHGGKDQTDRESTISDFKNDV 826
Query: 476 YHVLIATDVAARGLDIKSIKTVVNFDIAKDMDMHVHRIGRTGRAGDKEGVAYTLITQKEA 535
++LIAT VAARGLD+K ++ VVNFD + +VHR+GRTGRAG K G A T I++ +A
Sbjct: 827 CNLLIATSVAARGLDVKELELVVNFDAPNHYEDYVHRVGRTGRAGRK-GCAVTFISEDDA 885
Query: 536 RFAGELVNSLIAAGQNVSTELMDLA 560
++A +LV +L + Q V +L LA
Sbjct: 886 KYAPDLVKALELSEQPVPDDLKALA 910
>AT1G20920.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:7286356-7288842
FORWARD LENGTH=828
Length = 828
Score = 417 bits (1072), Expect = e-116, Method: Compositional matrix adjust.
Identities = 213/445 (47%), Positives = 292/445 (65%), Gaps = 5/445 (1%)
Query: 119 IDKKKIEPIPPLDHSSVDYEPFSKDFYEEPPSISGMSEQDVTDYRKSLAIRVSGFDVPKP 178
+ K K E + +DHS ++YEPF K+FY E IS M++++V YRK L ++V G DVP+P
Sbjct: 130 VKKTKAEKLSLVDHSKIEYEPFRKNFYIEVKDISRMTQEEVNTYRKELELKVHGKDVPRP 189
Query: 179 VKTFEDCGFPPPVMSAIKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLPM 238
+K + G ++ +KK YEKP IQ QALP+++SGRD IG+AKTGSGKT FVLPM
Sbjct: 190 IKFWHQTGLTSKILDTMKKLNYEKPMPIQTQALPIIMSGRDCIGVAKTGSGKTLGFVLPM 249
Query: 239 IVHIMDQPELQKEEGPIGVICAPTRELAQQIYLESKKFAKSYGIRVSAVYGGMSKLEQFK 298
+ HI DQP ++ +GPIG++ APTREL QQI+ + +KF+K GIR VYGG +Q
Sbjct: 250 LRHIKDQPPVEAGDGPIGLVMAPTRELVQQIHSDIRKFSKPLGIRCVPVYGGSGVAQQIS 309
Query: 299 ELKAGCEIVVATPGRLIDMLKM---KALTMTRATYLVLDEADRMFDLGFEPQVRSIVGQI 355
ELK G EIVV TPGR+ID+L K + R T+LV+DEADRMFD+GFEPQ+ I+ I
Sbjct: 310 ELKRGTEIVVCTPGRMIDILCTSSGKITNLRRVTFLVMDEADRMFDMGFEPQITRIIQNI 369
Query: 356 RPDRQTSLFSATMPRKVEKLAREILSDPVRVIVGEVGMANEDITQVVQVVPSDSXXXXXX 415
RP+RQT LFSAT PR+VE LAR++L+ PV + VG + N+DITQ+V+V P +S
Sbjct: 370 RPERQTVLFSATFPRQVETLARKVLNKPVEIQVGGRSVVNKDITQLVEVRP-ESDRFLRL 428
Query: 416 XXXXXXTIDQGDTLVFASKKATVDDIETQLSQRGFKVAALHGDKDQASRMDILQKFKSGV 475
++G LVF + D + + + + +LHG KDQ R + FK+ V
Sbjct: 429 LELLGEWSEKGKILVFVQSQEKCDALYRDMIKSSYPCLSLHGGKDQTDRESTISDFKNDV 488
Query: 476 YHVLIATDVAARGLDIKSIKTVVNFDIAKDMDMHVHRIGRTGRAGDKEGVAYTLITQKEA 535
++LIAT VAARGLD+K ++ VVNFD + +VHR+GRTGRAG K G A T I++ +A
Sbjct: 489 CNLLIATSVAARGLDVKELELVVNFDAPNHYEDYVHRVGRTGRAGRK-GCAVTFISEDDA 547
Query: 536 RFAGELVNSLIAAGQNVSTELMDLA 560
++A +LV +L + Q V +L LA
Sbjct: 548 KYAPDLVKALELSEQPVPDDLKALA 572
>AT1G55150.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:20574634-20577141 FORWARD LENGTH=501
Length = 501
Score = 412 bits (1060), Expect = e-115, Method: Compositional matrix adjust.
Identities = 208/423 (49%), Positives = 279/423 (65%), Gaps = 3/423 (0%)
Query: 139 PFSKDFYEEPPSISGMSEQDVTDYRKSLAIRVSGFDVPKPVKTFEDCGFPPPVMSAIKKQ 198
PF K+FY E P+++ M++ +V +YRK I V G D+PKPVK+F D GFP V+ +KK
Sbjct: 58 PFEKNFYVESPAVAAMTDTEVEEYRKLREITVEGKDIPKPVKSFRDVGFPDYVLEEVKKA 117
Query: 199 GYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELQKEEGPIGVI 258
G+ +PT IQ Q P+ + GRD+IGIA+TGSGKT +++LP IVH+ QP L +GPI ++
Sbjct: 118 GFTEPTPIQSQGWPMAMKGRDLIGIAETGSGKTLSYLLPAIVHVNAQPMLAHGDGPIVLV 177
Query: 259 CAPTRELAQQIYLESKKFAKSYGIRVSAVYGGMSKLEQFKELKAGCEIVVATPGRLIDML 318
APTRELA QI E+ KF S I+ + +YGG+ K Q ++L+ G EIV+ATPGRLIDM+
Sbjct: 178 LAPTRELAVQIQQEASKFGSSSKIKTTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMM 237
Query: 319 KMKALTMTRATYLVLDEADRMFDLGFEPQVRSIVGQIRPDRQTSLFSATMPRKVEKLARE 378
+ + R TYLVLDEADRM D+GF+PQ+R IV IRPDRQT +SAT P++VE+L+++
Sbjct: 238 ESNNTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSHIRPDRQTLYWSATWPKEVEQLSKK 297
Query: 379 ILSDPVRVIVGEVGM-ANEDITQVVQVVPSDSXXXXXXXXXXXXTIDQGDTLVFASKKAT 437
L +P +VI+G + AN I Q+V V+ S+S +D LVF K
Sbjct: 298 FLYNPYKVIIGSSDLKANRAIRQIVDVI-SESQKYNKLVKLLEDIMDGSRILVFLDTKKG 356
Query: 438 VDDIETQLSQRGFKVAALHGDKDQASRMDILQKFKSGVYHVLIATDVAARGLDIKSIKTV 497
D I QL G+ ++HGDK QA R +L +F+SG ++ ATDVAARGLD+K +K V
Sbjct: 357 CDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAARGLDVKDVKYV 416
Query: 498 VNFDIAKDMDMHVHRIGRTGRAGDKEGVAYTLITQKEARFAGELVNSLIAAGQNVSTELM 557
+N+D ++ +VHRIGRTGRAG K G AYT T ARFA EL N L AGQ VS EL
Sbjct: 417 INYDFPGSLEDYVHRIGRTGRAGAK-GTAYTFFTVANARFAKELTNILQEAGQKVSPELA 475
Query: 558 DLA 560
+
Sbjct: 476 SMG 478
>AT3G09620.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:2949152-2952205
REVERSE LENGTH=989
Length = 989
Score = 388 bits (997), Expect = e-108, Method: Compositional matrix adjust.
Identities = 207/446 (46%), Positives = 281/446 (63%), Gaps = 36/446 (8%)
Query: 119 IDKKKIEPIPPLDHSSVDYEPFSKDFYEEPPSISGMSEQDVTDYRKSLAIRVSGFDVPKP 178
+ K K E + +DHS ++YEPF K+FY E IS M++ V YRK L ++V G DVP+P
Sbjct: 335 VKKTKAEKLSLVDHSKIEYEPFRKNFYIEVKDISRMTQDAVNAYRKELELKVHGKDVPRP 394
Query: 179 VKTFEDCGFPPPVMSAIKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLPM 238
++ + G ++ +KK YEKP IQ QALP+++SGRD IG+AKTGSGKT FVLPM
Sbjct: 395 IQFWHQTGLTSKILDTLKKLNYEKPMPIQAQALPIIMSGRDCIGVAKTGSGKTLGFVLPM 454
Query: 239 IVHIMDQPELQKEEGPIGVICAPTRELAQQIYLESKKFAKSYGIRVSAVYGGMSKLEQFK 298
+ HI DQP ++ +GPIG++ APTREL QQIY + +KF+K+ GI VYGG +Q
Sbjct: 455 LRHIKDQPPVEAGDGPIGLVMAPTRELVQQIYSDIRKFSKALGIICVPVYGGSGVAQQIS 514
Query: 299 ELKAGCEIVVATPGRLIDMLKM---KALTMTRATYLVLDEADRMFDLGFEPQVRSIVGQI 355
ELK G EIVV TPGR+ID+L K + R TYLV+DEADRMFD+GFEPQ+ IV I
Sbjct: 515 ELKRGTEIVVCTPGRMIDILCTSSGKITNLRRVTYLVMDEADRMFDMGFEPQITRIVQNI 574
Query: 356 RPDRQTSLFSATMPRKVEKLAREILSDPVRVIVGEVGMANEDITQVVQVVPSDSXXXXXX 415
RPDRQT LFSAT PR+VE LAR++L+ PV + VG + N+DITQ+V++ P +S
Sbjct: 575 RPDRQTVLFSATFPRQVETLARKVLNKPVEIQVGGRSVVNKDITQLVEIRP-ESERFSRL 633
Query: 416 XXXXXXTIDQGDTLVFA-SKKATVDDIETQLSQRGFKVAALHGDKDQASRMDILQKFKSG 474
++G LVF S++ ++ D FKS
Sbjct: 634 LELLGEWYEKGKVLVFVRSQEKSISD------------------------------FKSD 663
Query: 475 VYHVLIATDVAARGLDIKSIKTVVNFDIAKDMDMHVHRIGRTGRAGDKEGVAYTLITQKE 534
V ++LIAT VAARGLD+K ++ VVNFD + +VHR+GRTGRAG K G A T I++ +
Sbjct: 664 VCNLLIATSVAARGLDVKELELVVNFDAPNHYEDYVHRVGRTGRAGRK-GCAVTFISEDD 722
Query: 535 ARFAGELVNSLIAAGQNVSTELMDLA 560
A++A +LV +L + Q V ++ +A
Sbjct: 723 AKYAPDLVKALELSEQPVPDDVKAVA 748
>AT5G63120.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:25319798-25322071
REVERSE LENGTH=484
Length = 484
Score = 359 bits (921), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 178/351 (50%), Positives = 233/351 (66%), Gaps = 2/351 (0%)
Query: 140 FSKDFYEEPPSISGMSEQDVTDYRKSLAIRVSGFDVPKPVKTFEDCGFPPPVMSAIKKQG 199
F K+FY E P++ M+EQDV YR I V G DVPKP+K F+D FP ++ AI K G
Sbjct: 125 FEKNFYVESPTVQAMTEQDVAMYRTERDISVEGRDVPKPMKMFQDANFPDNILEAIAKLG 184
Query: 200 YEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELQKEEGPIGVIC 259
+ +PT IQ Q P+ L GRD+IGIA+TGSGKT A++LP +VH+ QP L +++GPI +I
Sbjct: 185 FTEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPALVHVSAQPRLGQDDGPIVLIL 244
Query: 260 APTRELAQQIYLESKKFAKSYGIRVSAVYGGMSKLEQFKELKAGCEIVVATPGRLIDMLK 319
APTRELA QI ES+KF G+R + +YGG K Q ++L+ G EIV+ATPGRLIDML+
Sbjct: 245 APTRELAVQIQEESRKFGLRSGVRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLE 304
Query: 320 MKALTMTRATYLVLDEADRMFDLGFEPQVRSIVGQIRPDRQTSLFSATMPRKVEKLAREI 379
+ + R TYLVLDEADRM D+GFEPQ+R IV QIRPDRQT L+SAT PR+VE LAR+
Sbjct: 305 CQHTNLKRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLLWSATWPREVETLARQF 364
Query: 380 LSDPVRVIVGEVGM-ANEDITQVVQVVPSDSXXXXXXXXXXXXTIDQGDTLVFASKKATV 438
L DP + I+G + AN+ I QV+++VP+ +D L+F K
Sbjct: 365 LRDPYKAIIGSTDLKANQSINQVIEIVPT-PEKYNRLLTLLKQLMDGSKILIFVETKRGC 423
Query: 439 DDIETQLSQRGFKVAALHGDKDQASRMDILQKFKSGVYHVLIATDVAARGL 489
D + QL G+ A+HGDK Q+ R +L +FKSG ++ ATDVAARGL
Sbjct: 424 DQVTRQLRMDGWPALAIHGDKTQSERDRVLAEFKSGRSPIMTATDVAARGL 474
>AT3G06480.1 | Symbols: | DEAD box RNA helicase family protein |
chr3:1985697-1989666 REVERSE LENGTH=1088
Length = 1088
Score = 333 bits (853), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 178/416 (42%), Positives = 255/416 (61%), Gaps = 10/416 (2%)
Query: 149 PSISGMSEQDVTDYRKSLAIRVSGFDVPKPVKTFEDCGFPPPVMSAIKKQGYEKPTSIQC 208
P + +S ++ YRK + +G ++P P TFE G PP ++ + G+ PT IQ
Sbjct: 406 PDVPHLSPVEI--YRKQHEVTTTGENIPAPYITFESSGLPPEILRELLSAGFPSPTPIQA 463
Query: 209 QALPVVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELQKEEGPIGVICAPTRELAQQ 268
Q P+ L RDI+ IAKTGSGKT +++P + ++ GP +I APTRELA Q
Sbjct: 464 QTWPIALQSRDIVAIAKTGSGKTLGYLIPAFI-LLRHCRNDSRNGPTVLILAPTRELATQ 522
Query: 269 IYLESKKFAKSYGIRVSAVYGGMSKLEQFKELKAGCEIVVATPGRLIDMLKMKALTMTRA 328
I E+ +F +S I + +YGG K Q KEL+ G +IVVATPGRL D+L+MK + +
Sbjct: 523 IQDEALRFGRSSRISCTCLYGGAPKGPQLKELERGADIVVATPGRLNDILEMKMIDFQQV 582
Query: 329 TYLVLDEADRMFDLGFEPQVRSIVGQIRPDRQTSLFSATMPRKVEKLAREILSDPVRVIV 388
+ LVLDEADRM D+GFEPQ+R IV +I P RQT +++AT P++V K+A ++L +PV+V +
Sbjct: 583 SLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIASDLLVNPVQVNI 642
Query: 389 GEVG--MANEDITQVVQVVPSDSXXXXXXXXXXXXTIDQGD-TLVFASKKATVDDIETQL 445
G V AN+ ITQ V+VVP + ++G ++F S K D + +
Sbjct: 643 GRVDELAANKAITQYVEVVP--QMEKERRLEQILRSQERGSKVIIFCSTKRLCDHLARSV 700
Query: 446 SQRGFKVAALHGDKDQASRMDILQKFKSGVYHVLIATDVAARGLDIKSIKTVVNFDIAKD 505
R F +HGDK Q R +L +F+SG VLIATDVAARGLDIK I+ V+N+D
Sbjct: 701 G-RHFGAVVIHGDKTQGERDWVLNQFRSGKSCVLIATDVAARGLDIKDIRVVINYDFPTG 759
Query: 506 MDMHVHRIGRTGRAGDKEGVAYTLITQKEARFAGELVNSLIAAGQNVSTELMDLAM 561
++ +VHRIGRTGRAG GVA+T T+++ ++A +L+ L A Q V ++ D+AM
Sbjct: 760 VEDYVHRIGRTGRAG-ATGVAFTFFTEQDWKYAPDLIKVLEGANQQVPPQVRDIAM 814
>AT5G14610.2 | Symbols: | DEAD box RNA helicase family protein |
chr5:4711271-4714713 FORWARD LENGTH=645
Length = 645
Score = 331 bits (848), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 175/416 (42%), Positives = 259/416 (62%), Gaps = 8/416 (1%)
Query: 148 PPSISGMSEQDVTDYRKSLAIRVSGFDVPKPVKTFEDCGFPPPVMSAIKKQGYEKPTSIQ 207
PPS + +E Y + I VSG VP P+ +FE G P ++ + G+ P+ IQ
Sbjct: 129 PPSSAAGNELSPEAYCRKHEITVSGGQVPPPLMSFEATGLPNELLREVYSAGFSAPSPIQ 188
Query: 208 CQALPVVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELQKEEGPIGVICAPTRELAQ 267
Q+ P+ + RDI+ IAKTGSGKT +++P +H + + GP ++ +PTRELA
Sbjct: 189 AQSWPIAMQNRDIVAIAKTGSGKTLGYLIPGFMH-LQRIHNDSRMGPTILVLSPTRELAT 247
Query: 268 QIYLESKKFAKSYGIRVSAVYGGMSKLEQFKELKAGCEIVVATPGRLIDMLKMKALTMTR 327
QI +E+ KF KS I + +YGG K Q KE++ G +IVVATPGRL D+L+MK +++ +
Sbjct: 248 QIQVEALKFGKSSKISCACLYGGAPKGPQLKEIERGVDIVVATPGRLNDILEMKRISLHQ 307
Query: 328 ATYLVLDEADRMFDLGFEPQVRSIVGQIRPDRQTSLFSATMPRKVEKLAREILSDPVRVI 387
+YLVLDEADRM D+GFEPQ+R IV ++ RQT +++AT P++V K+A ++L +P +V
Sbjct: 308 VSYLVLDEADRMLDMGFEPQIRKIVNEVPTKRQTLMYTATWPKEVRKIAADLLVNPAQVN 367
Query: 388 VGEVG--MANEDITQVVQVV-PSDSXXXXXXXXXXXXTIDQGDTLVFASKKATVDDIETQ 444
+G V +AN+ ITQ ++V+ P + + ++F S K D +
Sbjct: 368 IGNVDELVANKSITQTIEVLAPMEKHSRLEQILRSQEPGSK--IIIFCSTKRMCDQLARN 425
Query: 445 LSQRGFKVAALHGDKDQASRMDILQKFKSGVYHVLIATDVAARGLDIKSIKTVVNFDIAK 504
L+ R F AA+HGDK QA R D+L +F+SG VL+ATDVAARGLD+K I+ VVN+D
Sbjct: 426 LT-RTFGAAAIHGDKSQAERDDVLNQFRSGRTPVLVATDVAARGLDVKDIRVVVNYDFPN 484
Query: 505 DMDMHVHRIGRTGRAGDKEGVAYTLITQKEARFAGELVNSLIAAGQNVSTELMDLA 560
++ +VHRIGRTGRAG G+AYT ++A+ A +L+ L A Q V ++ ++A
Sbjct: 485 GVEDYVHRIGRTGRAG-ATGLAYTFFGDQDAKHASDLIKILEGANQKVPPQVREMA 539
>AT3G01540.4 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 |
chr3:213077-216142 REVERSE LENGTH=619
Length = 619
Score = 325 bits (833), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 174/415 (41%), Positives = 257/415 (61%), Gaps = 8/415 (1%)
Query: 149 PSISGMSEQDVTDYRKSLAIRVSGFDVPKPVKTFEDCGFPPPVMSAIKKQGYEKPTSIQC 208
PS + SE Y + I VSG VP P+ +FE GFPP ++ + G+ PT IQ
Sbjct: 127 PSSAPASELSPEAYSRRHEITVSGGQVPPPLMSFEATGFPPELLREVLSAGFSAPTPIQA 186
Query: 209 QALPVVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELQKEEGPIGVICAPTRELAQQ 268
Q+ P+ + GRDI+ IAKTGSGKT +++P +H + + GP ++ +PTRELA Q
Sbjct: 187 QSWPIAMQGRDIVAIAKTGSGKTLGYLIPGFLH-LQRIRNDSRMGPTILVLSPTRELATQ 245
Query: 269 IYLESKKFAKSYGIRVSAVYGGMSKLEQFKELKAGCEIVVATPGRLIDMLKMKALTMTRA 328
I E+ KF +S I + +YGG K Q ++L+ G +IVVATPGRL D+L+M+ +++ +
Sbjct: 246 IQEEAVKFGRSSRISCTCLYGGAPKGPQLRDLERGADIVVATPGRLNDILEMRRISLRQI 305
Query: 329 TYLVLDEADRMFDLGFEPQVRSIVGQIRPDRQTSLFSATMPRKVEKLAREILSDPVRVIV 388
+YLVLDEADRM D+GFEPQ+R IV +I RQT +++AT P+ V K+A ++L +P +V +
Sbjct: 306 SYLVLDEADRMLDMGFEPQIRKIVKEIPTKRQTLMYTATWPKGVRKIAADLLVNPAQVNI 365
Query: 389 GEVG--MANEDITQVVQVV-PSDSXXXXXXXXXXXXTIDQGDTLVFASKKATVDDIETQL 445
G V +AN+ ITQ ++VV P + + ++F S K D + L
Sbjct: 366 GNVDELVANKSITQHIEVVAPMEKQRRLEQILRSQEPGSK--VIIFCSTKRMCDQLTRNL 423
Query: 446 SQRGFKVAALHGDKDQASRMDILQKFKSGVYHVLIATDVAARGLDIKSIKTVVNFDIAKD 505
+ R F AA+HGDK Q R ++L +F+SG VL+ATDVAARGLD+K I+ VVN+D
Sbjct: 424 T-RQFGAAAIHGDKSQPERDNVLNQFRSGRTPVLVATDVAARGLDVKDIRAVVNYDFPNG 482
Query: 506 MDMHVHRIGRTGRAGDKEGVAYTLITQKEARFAGELVNSLIAAGQNVSTELMDLA 560
++ +VHRIGRTGRAG G A+T ++++ A +L+ L A Q V ++ ++A
Sbjct: 483 VEDYVHRIGRTGRAG-ATGQAFTFFGDQDSKHASDLIKILEGANQRVPPQIREMA 536
>AT3G01540.3 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 |
chr3:213077-216142 REVERSE LENGTH=619
Length = 619
Score = 325 bits (833), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 174/415 (41%), Positives = 257/415 (61%), Gaps = 8/415 (1%)
Query: 149 PSISGMSEQDVTDYRKSLAIRVSGFDVPKPVKTFEDCGFPPPVMSAIKKQGYEKPTSIQC 208
PS + SE Y + I VSG VP P+ +FE GFPP ++ + G+ PT IQ
Sbjct: 127 PSSAPASELSPEAYSRRHEITVSGGQVPPPLMSFEATGFPPELLREVLSAGFSAPTPIQA 186
Query: 209 QALPVVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELQKEEGPIGVICAPTRELAQQ 268
Q+ P+ + GRDI+ IAKTGSGKT +++P +H + + GP ++ +PTRELA Q
Sbjct: 187 QSWPIAMQGRDIVAIAKTGSGKTLGYLIPGFLH-LQRIRNDSRMGPTILVLSPTRELATQ 245
Query: 269 IYLESKKFAKSYGIRVSAVYGGMSKLEQFKELKAGCEIVVATPGRLIDMLKMKALTMTRA 328
I E+ KF +S I + +YGG K Q ++L+ G +IVVATPGRL D+L+M+ +++ +
Sbjct: 246 IQEEAVKFGRSSRISCTCLYGGAPKGPQLRDLERGADIVVATPGRLNDILEMRRISLRQI 305
Query: 329 TYLVLDEADRMFDLGFEPQVRSIVGQIRPDRQTSLFSATMPRKVEKLAREILSDPVRVIV 388
+YLVLDEADRM D+GFEPQ+R IV +I RQT +++AT P+ V K+A ++L +P +V +
Sbjct: 306 SYLVLDEADRMLDMGFEPQIRKIVKEIPTKRQTLMYTATWPKGVRKIAADLLVNPAQVNI 365
Query: 389 GEVG--MANEDITQVVQVV-PSDSXXXXXXXXXXXXTIDQGDTLVFASKKATVDDIETQL 445
G V +AN+ ITQ ++VV P + + ++F S K D + L
Sbjct: 366 GNVDELVANKSITQHIEVVAPMEKQRRLEQILRSQEPGSK--VIIFCSTKRMCDQLTRNL 423
Query: 446 SQRGFKVAALHGDKDQASRMDILQKFKSGVYHVLIATDVAARGLDIKSIKTVVNFDIAKD 505
+ R F AA+HGDK Q R ++L +F+SG VL+ATDVAARGLD+K I+ VVN+D
Sbjct: 424 T-RQFGAAAIHGDKSQPERDNVLNQFRSGRTPVLVATDVAARGLDVKDIRAVVNYDFPNG 482
Query: 506 MDMHVHRIGRTGRAGDKEGVAYTLITQKEARFAGELVNSLIAAGQNVSTELMDLA 560
++ +VHRIGRTGRAG G A+T ++++ A +L+ L A Q V ++ ++A
Sbjct: 483 VEDYVHRIGRTGRAG-ATGQAFTFFGDQDSKHASDLIKILEGANQRVPPQIREMA 536
>AT3G01540.2 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 |
chr3:213077-216142 REVERSE LENGTH=619
Length = 619
Score = 325 bits (833), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 174/415 (41%), Positives = 257/415 (61%), Gaps = 8/415 (1%)
Query: 149 PSISGMSEQDVTDYRKSLAIRVSGFDVPKPVKTFEDCGFPPPVMSAIKKQGYEKPTSIQC 208
PS + SE Y + I VSG VP P+ +FE GFPP ++ + G+ PT IQ
Sbjct: 127 PSSAPASELSPEAYSRRHEITVSGGQVPPPLMSFEATGFPPELLREVLSAGFSAPTPIQA 186
Query: 209 QALPVVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELQKEEGPIGVICAPTRELAQQ 268
Q+ P+ + GRDI+ IAKTGSGKT +++P +H + + GP ++ +PTRELA Q
Sbjct: 187 QSWPIAMQGRDIVAIAKTGSGKTLGYLIPGFLH-LQRIRNDSRMGPTILVLSPTRELATQ 245
Query: 269 IYLESKKFAKSYGIRVSAVYGGMSKLEQFKELKAGCEIVVATPGRLIDMLKMKALTMTRA 328
I E+ KF +S I + +YGG K Q ++L+ G +IVVATPGRL D+L+M+ +++ +
Sbjct: 246 IQEEAVKFGRSSRISCTCLYGGAPKGPQLRDLERGADIVVATPGRLNDILEMRRISLRQI 305
Query: 329 TYLVLDEADRMFDLGFEPQVRSIVGQIRPDRQTSLFSATMPRKVEKLAREILSDPVRVIV 388
+YLVLDEADRM D+GFEPQ+R IV +I RQT +++AT P+ V K+A ++L +P +V +
Sbjct: 306 SYLVLDEADRMLDMGFEPQIRKIVKEIPTKRQTLMYTATWPKGVRKIAADLLVNPAQVNI 365
Query: 389 GEVG--MANEDITQVVQVV-PSDSXXXXXXXXXXXXTIDQGDTLVFASKKATVDDIETQL 445
G V +AN+ ITQ ++VV P + + ++F S K D + L
Sbjct: 366 GNVDELVANKSITQHIEVVAPMEKQRRLEQILRSQEPGSK--VIIFCSTKRMCDQLTRNL 423
Query: 446 SQRGFKVAALHGDKDQASRMDILQKFKSGVYHVLIATDVAARGLDIKSIKTVVNFDIAKD 505
+ R F AA+HGDK Q R ++L +F+SG VL+ATDVAARGLD+K I+ VVN+D
Sbjct: 424 T-RQFGAAAIHGDKSQPERDNVLNQFRSGRTPVLVATDVAARGLDVKDIRAVVNYDFPNG 482
Query: 506 MDMHVHRIGRTGRAGDKEGVAYTLITQKEARFAGELVNSLIAAGQNVSTELMDLA 560
++ +VHRIGRTGRAG G A+T ++++ A +L+ L A Q V ++ ++A
Sbjct: 483 VEDYVHRIGRTGRAG-ATGQAFTFFGDQDSKHASDLIKILEGANQRVPPQIREMA 536
>AT3G01540.1 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 |
chr3:213077-216142 REVERSE LENGTH=618
Length = 618
Score = 325 bits (833), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 174/415 (41%), Positives = 257/415 (61%), Gaps = 8/415 (1%)
Query: 149 PSISGMSEQDVTDYRKSLAIRVSGFDVPKPVKTFEDCGFPPPVMSAIKKQGYEKPTSIQC 208
PS + SE Y + I VSG VP P+ +FE GFPP ++ + G+ PT IQ
Sbjct: 127 PSSAPASELSPEAYSRRHEITVSGGQVPPPLMSFEATGFPPELLREVLSAGFSAPTPIQA 186
Query: 209 QALPVVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELQKEEGPIGVICAPTRELAQQ 268
Q+ P+ + GRDI+ IAKTGSGKT +++P +H + + GP ++ +PTRELA Q
Sbjct: 187 QSWPIAMQGRDIVAIAKTGSGKTLGYLIPGFLH-LQRIRNDSRMGPTILVLSPTRELATQ 245
Query: 269 IYLESKKFAKSYGIRVSAVYGGMSKLEQFKELKAGCEIVVATPGRLIDMLKMKALTMTRA 328
I E+ KF +S I + +YGG K Q ++L+ G +IVVATPGRL D+L+M+ +++ +
Sbjct: 246 IQEEAVKFGRSSRISCTCLYGGAPKGPQLRDLERGADIVVATPGRLNDILEMRRISLRQI 305
Query: 329 TYLVLDEADRMFDLGFEPQVRSIVGQIRPDRQTSLFSATMPRKVEKLAREILSDPVRVIV 388
+YLVLDEADRM D+GFEPQ+R IV +I RQT +++AT P+ V K+A ++L +P +V +
Sbjct: 306 SYLVLDEADRMLDMGFEPQIRKIVKEIPTKRQTLMYTATWPKGVRKIAADLLVNPAQVNI 365
Query: 389 GEVG--MANEDITQVVQVV-PSDSXXXXXXXXXXXXTIDQGDTLVFASKKATVDDIETQL 445
G V +AN+ ITQ ++VV P + + ++F S K D + L
Sbjct: 366 GNVDELVANKSITQHIEVVAPMEKQRRLEQILRSQEPGSK--VIIFCSTKRMCDQLTRNL 423
Query: 446 SQRGFKVAALHGDKDQASRMDILQKFKSGVYHVLIATDVAARGLDIKSIKTVVNFDIAKD 505
+ R F AA+HGDK Q R ++L +F+SG VL+ATDVAARGLD+K I+ VVN+D
Sbjct: 424 T-RQFGAAAIHGDKSQPERDNVLNQFRSGRTPVLVATDVAARGLDVKDIRAVVNYDFPNG 482
Query: 506 MDMHVHRIGRTGRAGDKEGVAYTLITQKEARFAGELVNSLIAAGQNVSTELMDLA 560
++ +VHRIGRTGRAG G A+T ++++ A +L+ L A Q V ++ ++A
Sbjct: 483 VEDYVHRIGRTGRAG-ATGQAFTFFGDQDSKHASDLIKILEGANQRVPPQIREMA 536
>AT2G33730.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:14265679-14267880
REVERSE LENGTH=733
Length = 733
Score = 318 bits (814), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 172/426 (40%), Positives = 252/426 (59%), Gaps = 23/426 (5%)
Query: 151 ISGMSEQDVTDYRKSLAIRVSGFDVPKPVKTFEDCGFPPPVMSAIKKQGYEKPTSIQCQA 210
+ M+E+D +R+ I G +P+P++++E+ ++ A+++ GY+KP+ IQ A
Sbjct: 284 LEEMTERDWRIFREDFNISYKGSRIPRPMRSWEESKLTSELLKAVERAGYKKPSPIQMAA 343
Query: 211 LPVVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELQKE---EGPIGVICAPTRELAQ 267
+P+ L RD+IGIA+TGSGKTAAFVLPM+ +I P + +E EGP V+ APTRELAQ
Sbjct: 344 IPLGLQQRDVIGIAETGSGKTAAFVLPMLAYISRLPPMSEENETEGPYAVVMAPTRELAQ 403
Query: 268 QIYLESKKFAKSYGIRVSAVYGGMSKLEQFKELKAGCEIVVATPGRLIDMLKMKALTMTR 327
QI E+ KFA G RV+++ GG S EQ ++ GCEIV+ATPGRLID L+ + + +
Sbjct: 404 QIEEETVKFAHYLGFRVTSIVGGQSIEEQGLKITQGCEIVIATPGRLIDCLERRYAVLNQ 463
Query: 328 ATYLVLDEADRMFDLGFEPQVRSIV-----GQIRPD------------RQTSLFSATMPR 370
Y+VLDEADRM D+GFEPQV ++ ++P+ R T +FSATMP
Sbjct: 464 CNYVVLDEADRMIDMGFEPQVAGVLDAMPSSNLKPENEEEELDEKKIYRTTYMFSATMPP 523
Query: 371 KVEKLAREILSDPVRVIVGEVGMANEDITQVVQVVPSDSXXXXXXXXXXXXTIDQGDTLV 430
VE+LAR+ L +PV V +G G + I+Q V+ + + +V
Sbjct: 524 GVERLARKYLRNPVVVTIGTAGKTTDLISQ--HVIMMKESEKFFRLQKLLDELGEKTAIV 581
Query: 431 FASKKATVDDIETQLSQRGFKVAALHGDKDQASRMDILQKFKSGVYHVLIATDVAARGLD 490
F + K D I L + G++V LHG K Q R L+ F++ Y+VL+ATDV RG+D
Sbjct: 582 FVNTKKNCDSIAKNLDKAGYRVTTLHGGKSQEQREISLEGFRAKRYNVLVATDVVGRGID 641
Query: 491 IKSIKTVVNFDIAKDMDMHVHRIGRTGRAGDKEGVAYTLITQKEARFAGELVNSLIAAGQ 550
I + V+N+D+ K ++M+ HRIGRTGRAG K GVA + +T + +L L+ +
Sbjct: 642 IPDVAHVINYDMPKHIEMYTHRIGRTGRAG-KSGVATSFLTLHDTEVFYDLKQMLVQSNS 700
Query: 551 NVSTEL 556
V EL
Sbjct: 701 AVPPEL 706
>AT2G42520.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:17705382-17708744
FORWARD LENGTH=633
Length = 633
Score = 315 bits (806), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 188/448 (41%), Positives = 254/448 (56%), Gaps = 22/448 (4%)
Query: 131 DHSSVDYEPFSKDFYEEPPSISGMSEQDVT----DYRKSLAIRVSGFDVPKPVKTFEDCG 186
D + PF D E P+ +EQD T D + + I SG +VP PV TF +
Sbjct: 109 DRREREVNPFENDDSEPEPA---FTEQDNTVINFDAYEDIPIETSGDNVPPPVNTFAEID 165
Query: 187 FPPPVMSAIKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQP 246
+ I++ Y KPT +Q A+P++L GRD++ A+TGSGKTAAF P+I IM
Sbjct: 166 LGEALNLNIRRCKYVKPTPVQRHAIPILLEGRDLMACAQTGSGKTAAFCFPIISGIMKDQ 225
Query: 247 ELQKEEG-----PIGVICAPTRELAQQIYLESKKFAKSYGIRVSAVYGGMSKLEQFKELK 301
+Q+ G P+ VI +PTRELA QI+ E+KKF+ G++V YGG +Q +EL+
Sbjct: 226 HVQRPRGSRTVYPLAVILSPTRELASQIHDEAKKFSYQTGVKVVVAYGGTPINQQLRELE 285
Query: 302 AGCEIVVATPGRLIDMLKMKALTMTRATYLVLDEADRMFDLGFEPQVRSIVGQI----RP 357
G +I+VATPGRL D+L+ ++M +L LDEADRM D+GFEPQ+R IV Q+ R
Sbjct: 286 RGVDILVATPGRLNDLLERARVSMQMIRFLALDEADRMLDMGFEPQIRKIVEQMDMPPRG 345
Query: 358 DRQTSLFSATMPRKVEKLAREILSDPVRVIVGEVGMANEDITQVVQ-VVPSD--SXXXXX 414
RQT LFSAT PR++++LA + L++ + + VG VG + + I Q V+ V+ SD S
Sbjct: 346 VRQTLLFSATFPREIQRLAADFLANYIFLAVGRVGSSTDLIVQRVEFVLDSDKRSHLMDL 405
Query: 415 XXXXXXXTID--QGDTLVFASKKATVDDIETQLSQRGFKVAALHGDKDQASRMDILQKFK 472
I Q TLVF K D +E L GF ++HGD+ Q R L+ FK
Sbjct: 406 LHAQRENGIQGKQALTLVFVETKRGADSLENWLCINGFPATSIHGDRTQQEREVALKAFK 465
Query: 473 SGVYHVLIATDVAARGLDIKSIKTVVNFDIAKDMDMHVHRIGRTGRAGDKEGVAYTLITQ 532
SG +L+ATDVAARGLDI + VVNFD+ D+D +VHRIGRTGRAG K G+A
Sbjct: 466 SGRTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAG-KSGLATAFFND 524
Query: 533 KEARFAGELVNSLIAAGQNVSTELMDLA 560
A L + A Q V L A
Sbjct: 525 GNTSLARPLAELMQEANQEVPEWLTRYA 552
>AT3G58510.3 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:21640608-21643464 FORWARD LENGTH=612
Length = 612
Score = 314 bits (805), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 184/446 (41%), Positives = 253/446 (56%), Gaps = 21/446 (4%)
Query: 131 DHSSVDYEPFSKDFYEEPPSISGMSEQDVT----DYRKSLAIRVSGFDVPKPVKTFEDCG 186
D + PF D EP +EQ+ T D + + + SG DVP PV TF D
Sbjct: 102 DRREREVNPFGDDAELEP----VFTEQENTGINFDAYEDIPVETSGGDVPPPVNTFADID 157
Query: 187 FPPPVMSAIKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQP 246
+ I++ Y +PT +Q A+P++L+ RD++ A+TGSGKTAAF P+I IM
Sbjct: 158 LGDALNLNIRRCKYVRPTPVQRHAIPILLAERDLMACAQTGSGKTAAFCFPIISGIMKDQ 217
Query: 247 ELQKEEG-----PIGVICAPTRELAQQIYLESKKFAKSYGIRVSAVYGGMSKLEQFKELK 301
+++ G P VI +PTRELA QI+ E+KKF+ G++V YGG +Q +EL+
Sbjct: 218 HVERPRGSRAVYPFAVILSPTRELACQIHDEAKKFSYQTGVKVVVAYGGTPIHQQLRELE 277
Query: 302 AGCEIVVATPGRLIDMLKMKALTMTRATYLVLDEADRMFDLGFEPQVRSIVGQI----RP 357
GC+I+VATPGRL D+L+ ++M +L LDEADRM D+GFEPQ+R IV Q+ R
Sbjct: 278 RGCDILVATPGRLNDLLERARVSMQMIRFLALDEADRMLDMGFEPQIRKIVEQMDMPPRG 337
Query: 358 DRQTSLFSATMPRKVEKLAREILSDPVRVIVGEVGMANEDITQVVQVV-PSD--SXXXXX 414
RQT LFSAT P ++++LA + +S+ + + VG VG + + ITQ V+ V SD S
Sbjct: 338 VRQTMLFSATFPSQIQRLAADFMSNYIFLAVGRVGSSTDLITQRVEFVQESDKRSHLMDL 397
Query: 415 XXXXXXXTIDQGDTLVFASKKATVDDIETQLSQRGFKVAALHGDKDQASRMDILQKFKSG 474
Q TLVF K D +E L F ++HGD+ Q R L+ FK+G
Sbjct: 398 LHAQRETQDKQSLTLVFVETKRGADTLENWLCMNEFPATSIHGDRTQQEREVALRSFKTG 457
Query: 475 VYHVLIATDVAARGLDIKSIKTVVNFDIAKDMDMHVHRIGRTGRAGDKEGVAYTLITQKE 534
+L+ATDVAARGLDI + VVNFD+ D+D +VHRIGRTGRAG K G+A +
Sbjct: 458 RTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAG-KSGIATAFFNENN 516
Query: 535 ARFAGELVNSLIAAGQNVSTELMDLA 560
A+ A L + A Q V L A
Sbjct: 517 AQLARSLAELMQEANQEVPEWLTRYA 542
>AT3G58510.2 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:21640608-21643464 FORWARD LENGTH=612
Length = 612
Score = 314 bits (805), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 184/446 (41%), Positives = 253/446 (56%), Gaps = 21/446 (4%)
Query: 131 DHSSVDYEPFSKDFYEEPPSISGMSEQDVT----DYRKSLAIRVSGFDVPKPVKTFEDCG 186
D + PF D EP +EQ+ T D + + + SG DVP PV TF D
Sbjct: 102 DRREREVNPFGDDAELEP----VFTEQENTGINFDAYEDIPVETSGGDVPPPVNTFADID 157
Query: 187 FPPPVMSAIKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQP 246
+ I++ Y +PT +Q A+P++L+ RD++ A+TGSGKTAAF P+I IM
Sbjct: 158 LGDALNLNIRRCKYVRPTPVQRHAIPILLAERDLMACAQTGSGKTAAFCFPIISGIMKDQ 217
Query: 247 ELQKEEG-----PIGVICAPTRELAQQIYLESKKFAKSYGIRVSAVYGGMSKLEQFKELK 301
+++ G P VI +PTRELA QI+ E+KKF+ G++V YGG +Q +EL+
Sbjct: 218 HVERPRGSRAVYPFAVILSPTRELACQIHDEAKKFSYQTGVKVVVAYGGTPIHQQLRELE 277
Query: 302 AGCEIVVATPGRLIDMLKMKALTMTRATYLVLDEADRMFDLGFEPQVRSIVGQI----RP 357
GC+I+VATPGRL D+L+ ++M +L LDEADRM D+GFEPQ+R IV Q+ R
Sbjct: 278 RGCDILVATPGRLNDLLERARVSMQMIRFLALDEADRMLDMGFEPQIRKIVEQMDMPPRG 337
Query: 358 DRQTSLFSATMPRKVEKLAREILSDPVRVIVGEVGMANEDITQVVQVV-PSD--SXXXXX 414
RQT LFSAT P ++++LA + +S+ + + VG VG + + ITQ V+ V SD S
Sbjct: 338 VRQTMLFSATFPSQIQRLAADFMSNYIFLAVGRVGSSTDLITQRVEFVQESDKRSHLMDL 397
Query: 415 XXXXXXXTIDQGDTLVFASKKATVDDIETQLSQRGFKVAALHGDKDQASRMDILQKFKSG 474
Q TLVF K D +E L F ++HGD+ Q R L+ FK+G
Sbjct: 398 LHAQRETQDKQSLTLVFVETKRGADTLENWLCMNEFPATSIHGDRTQQEREVALRSFKTG 457
Query: 475 VYHVLIATDVAARGLDIKSIKTVVNFDIAKDMDMHVHRIGRTGRAGDKEGVAYTLITQKE 534
+L+ATDVAARGLDI + VVNFD+ D+D +VHRIGRTGRAG K G+A +
Sbjct: 458 RTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAG-KSGIATAFFNENN 516
Query: 535 ARFAGELVNSLIAAGQNVSTELMDLA 560
A+ A L + A Q V L A
Sbjct: 517 AQLARSLAELMQEANQEVPEWLTRYA 542
>AT3G58510.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:21640608-21643464 FORWARD LENGTH=612
Length = 612
Score = 314 bits (805), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 184/446 (41%), Positives = 253/446 (56%), Gaps = 21/446 (4%)
Query: 131 DHSSVDYEPFSKDFYEEPPSISGMSEQDVT----DYRKSLAIRVSGFDVPKPVKTFEDCG 186
D + PF D EP +EQ+ T D + + + SG DVP PV TF D
Sbjct: 102 DRREREVNPFGDDAELEP----VFTEQENTGINFDAYEDIPVETSGGDVPPPVNTFADID 157
Query: 187 FPPPVMSAIKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQP 246
+ I++ Y +PT +Q A+P++L+ RD++ A+TGSGKTAAF P+I IM
Sbjct: 158 LGDALNLNIRRCKYVRPTPVQRHAIPILLAERDLMACAQTGSGKTAAFCFPIISGIMKDQ 217
Query: 247 ELQKEEG-----PIGVICAPTRELAQQIYLESKKFAKSYGIRVSAVYGGMSKLEQFKELK 301
+++ G P VI +PTRELA QI+ E+KKF+ G++V YGG +Q +EL+
Sbjct: 218 HVERPRGSRAVYPFAVILSPTRELACQIHDEAKKFSYQTGVKVVVAYGGTPIHQQLRELE 277
Query: 302 AGCEIVVATPGRLIDMLKMKALTMTRATYLVLDEADRMFDLGFEPQVRSIVGQI----RP 357
GC+I+VATPGRL D+L+ ++M +L LDEADRM D+GFEPQ+R IV Q+ R
Sbjct: 278 RGCDILVATPGRLNDLLERARVSMQMIRFLALDEADRMLDMGFEPQIRKIVEQMDMPPRG 337
Query: 358 DRQTSLFSATMPRKVEKLAREILSDPVRVIVGEVGMANEDITQVVQVV-PSD--SXXXXX 414
RQT LFSAT P ++++LA + +S+ + + VG VG + + ITQ V+ V SD S
Sbjct: 338 VRQTMLFSATFPSQIQRLAADFMSNYIFLAVGRVGSSTDLITQRVEFVQESDKRSHLMDL 397
Query: 415 XXXXXXXTIDQGDTLVFASKKATVDDIETQLSQRGFKVAALHGDKDQASRMDILQKFKSG 474
Q TLVF K D +E L F ++HGD+ Q R L+ FK+G
Sbjct: 398 LHAQRETQDKQSLTLVFVETKRGADTLENWLCMNEFPATSIHGDRTQQEREVALRSFKTG 457
Query: 475 VYHVLIATDVAARGLDIKSIKTVVNFDIAKDMDMHVHRIGRTGRAGDKEGVAYTLITQKE 534
+L+ATDVAARGLDI + VVNFD+ D+D +VHRIGRTGRAG K G+A +
Sbjct: 458 RTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAG-KSGIATAFFNENN 516
Query: 535 ARFAGELVNSLIAAGQNVSTELMDLA 560
A+ A L + A Q V L A
Sbjct: 517 AQLARSLAELMQEANQEVPEWLTRYA 542
>AT5G51280.1 | Symbols: | DEAD-box protein abstrakt, putative |
chr5:20841456-20843645 FORWARD LENGTH=591
Length = 591
Score = 307 bits (787), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 181/426 (42%), Positives = 244/426 (57%), Gaps = 16/426 (3%)
Query: 120 DKKKIEPIPPLDHSSVDYEPFSKDFYEEPPSISGMSEQDVTDYRKSLAIRVSGFDVPKPV 179
DKK + + L EP ++ P I MS + RK I V+G D+P P+
Sbjct: 87 DKKTLMSVRELAKGITYTEPLLTG-WKPPLHIRKMSSKQRDLIRKQWHIIVNGDDIPPPI 145
Query: 180 KTFEDCGFPPPVMSAIKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLPMI 239
K F+D FP PV+ +K++G +PT IQ Q LPV+L+GRD+IGIA TGSGKT FVLPMI
Sbjct: 146 KNFKDMKFPRPVLDTLKEKGIVQPTPIQVQGLPVILAGRDMIGIAFTGSGKTLVFVLPMI 205
Query: 240 VHIMDQPELQKE----EGPIGVICAPTRELAQQIYLESKKF------AKSYGIRVSAVYG 289
+ I Q E+ EGPIG+I P+RELA+Q Y ++F A +R G
Sbjct: 206 M-IALQEEMMMPIAAGEGPIGLIVCPSRELARQTYEVVEQFVAPLVEAGYPPLRSLLCIG 264
Query: 290 GMSKLEQFKELKAGCEIVVATPGRLIDMLKMKALTMTRATYLVLDEADRMFDLGFEPQVR 349
G+ Q + +K G IVVATPGRL DML K +++ YL LDEADR+ DLGFE +R
Sbjct: 265 GIDMRSQLEVVKRGVHIVVATPGRLKDMLAKKKMSLDACRYLTLDEADRLVDLGFEDDIR 324
Query: 350 SIVGQIRPDRQTSLFSATMPRKVEKLAREILSDPVRVIVGEVGMANEDITQVVQVVPSDS 409
+ + RQT LFSATMP K++ AR L PV V VG G AN D+ Q V+ V ++
Sbjct: 325 EVFDHFKSQRQTLLFSATMPTKIQIFARSALVKPVTVNVGRAGAANLDVIQEVEYVKQEA 384
Query: 410 XXXXXXXXXXXXTIDQGDTLVFASKKATVDDIETQLSQRGFKVAALHGDKDQASRMDILQ 469
+ L+F KA VDDI L +G + A+HG KDQ R +
Sbjct: 385 KIVYLLECLQKTS---PPVLIFCENKADVDDIHEYLLLKGVEAVAIHGGKDQEDREYAIS 441
Query: 470 KFKSGVYHVLIATDVAARGLDIKSIKTVVNFDIAKDMDMHVHRIGRTGRAGDKEGVAYTL 529
FK+G VL+ATDVA++GLD I+ V+N+D+ +++ +VHRIGRTGR G K G+A T
Sbjct: 442 SFKAGKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYVHRIGRTGRCG-KTGIATTF 500
Query: 530 ITQKEA 535
I + ++
Sbjct: 501 INKNQS 506
>AT3G58570.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:21657099-21660352
FORWARD LENGTH=646
Length = 646
Score = 305 bits (782), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 178/450 (39%), Positives = 252/450 (56%), Gaps = 25/450 (5%)
Query: 130 LDHSSVDYEPFSKDFYEEPPSISGMSEQDVT----DYRKSLAIRVSGFDVPKPVKTFEDC 185
D + PF D +P ++EQ+ T + + + I SG +VP PV TF +
Sbjct: 96 WDRRDTETNPFGNDGNADP----AVNEQENTVINFEAYEDIPIETSGDNVPPPVNTFAEI 151
Query: 186 GFPPPVMSAIKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQ 245
+ I++ Y KPT +Q A+P++ +GRD++ A+TGSGKTAAF P+I IM
Sbjct: 152 DLGEALNLNIQRCKYVKPTPVQRNAIPILAAGRDLMACAQTGSGKTAAFCFPIISGIMKD 211
Query: 246 PELQKEEG-----PIGVICAPTRELAQQIYLESKKFAKSYGIRVSAVYGGMSKLEQFKEL 300
+++ G P+ VI +PTRELA QI+ E++KF+ G++V YGG +Q +EL
Sbjct: 212 QHIERPRGVRGVYPLAVILSPTRELACQIHDEARKFSYQTGVKVVVAYGGTPVNQQIREL 271
Query: 301 KAGCEIVVATPGRLIDMLKMKALTMTRATYLVLDEADRMFDLGFEPQVRSIVGQIR---P 357
+ G +I+VATPGRL D+L+ +++ +L LDEADRM D+GFEPQ+R IV Q+ P
Sbjct: 272 ERGVDILVATPGRLNDLLERGRVSLQMVRFLALDEADRMLDMGFEPQIRKIVQQMDMPPP 331
Query: 358 D-RQTSLFSATMPRKVEKLAREILSDPVRVIVGEVGMANEDITQVVQVVPSDSXXXXXXX 416
RQT LFSAT PR++++LA + LS+ + + VG VG + + I Q V+ V DS
Sbjct: 332 GVRQTMLFSATFPREIQRLASDFLSNYIFLAVGRVGSSTDLIVQRVEFV-HDSDKRSHLM 390
Query: 417 XXXXXTIDQGD------TLVFASKKATVDDIETQLSQRGFKVAALHGDKDQASRMDILQK 470
+ G+ TLVF K D +E L GF +HGD+ Q R L+
Sbjct: 391 DLLHAQRENGNQGKQALTLVFVETKKGADSLENWLCINGFPATTIHGDRSQQEREVALRS 450
Query: 471 FKSGVYHVLIATDVAARGLDIKSIKTVVNFDIAKDMDMHVHRIGRTGRAGDKEGVAYTLI 530
FK+G +L+ATDVAARGLDI + VVNFD+ D+D +VHRIGRTGRAG+ G+A
Sbjct: 451 FKTGRTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGNS-GLATAFF 509
Query: 531 TQKEARFAGELVNSLIAAGQNVSTELMDLA 560
A L + A Q V L A
Sbjct: 510 NDNNTTMAKPLAELMQEANQEVPDWLTRYA 539
>AT5G14610.1 | Symbols: | DEAD box RNA helicase family protein |
chr5:4711271-4714713 FORWARD LENGTH=712
Length = 712
Score = 305 bits (781), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 159/365 (43%), Positives = 235/365 (64%), Gaps = 8/365 (2%)
Query: 199 GYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELQKEEGPIGVI 258
G+ P+ IQ Q+ P+ + RDI+ IAKTGSGKT +++P +H + + GP ++
Sbjct: 248 GFSAPSPIQAQSWPIAMQNRDIVAIAKTGSGKTLGYLIPGFMH-LQRIHNDSRMGPTILV 306
Query: 259 CAPTRELAQQIYLESKKFAKSYGIRVSAVYGGMSKLEQFKELKAGCEIVVATPGRLIDML 318
+PTRELA QI +E+ KF KS I + +YGG K Q KE++ G +IVVATPGRL D+L
Sbjct: 307 LSPTRELATQIQVEALKFGKSSKISCACLYGGAPKGPQLKEIERGVDIVVATPGRLNDIL 366
Query: 319 KMKALTMTRATYLVLDEADRMFDLGFEPQVRSIVGQIRPDRQTSLFSATMPRKVEKLARE 378
+MK +++ + +YLVLDEADRM D+GFEPQ+R IV ++ RQT +++AT P++V K+A +
Sbjct: 367 EMKRISLHQVSYLVLDEADRMLDMGFEPQIRKIVNEVPTKRQTLMYTATWPKEVRKIAAD 426
Query: 379 ILSDPVRVIVGEVG--MANEDITQVVQVV-PSDSXXXXXXXXXXXXTIDQGDTLVFASKK 435
+L +P +V +G V +AN+ ITQ ++V+ P + + ++F S K
Sbjct: 427 LLVNPAQVNIGNVDELVANKSITQTIEVLAPMEKHSRLEQILRSQEPGSK--IIIFCSTK 484
Query: 436 ATVDDIETQLSQRGFKVAALHGDKDQASRMDILQKFKSGVYHVLIATDVAARGLDIKSIK 495
D + L+ R F AA+HGDK QA R D+L +F+SG VL+ATDVAARGLD+K I+
Sbjct: 485 RMCDQLARNLT-RTFGAAAIHGDKSQAERDDVLNQFRSGRTPVLVATDVAARGLDVKDIR 543
Query: 496 TVVNFDIAKDMDMHVHRIGRTGRAGDKEGVAYTLITQKEARFAGELVNSLIAAGQNVSTE 555
VVN+D ++ +VHRIGRTGRAG G+AYT ++A+ A +L+ L A Q V +
Sbjct: 544 VVVNYDFPNGVEDYVHRIGRTGRAG-ATGLAYTFFGDQDAKHASDLIKILEGANQKVPPQ 602
Query: 556 LMDLA 560
+ ++A
Sbjct: 603 VREMA 607
>AT4G33370.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr4:16069669-16071405 REVERSE LENGTH=542
Length = 542
Score = 305 bits (780), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 186/464 (40%), Positives = 256/464 (55%), Gaps = 22/464 (4%)
Query: 106 GMVEYDSDDNPIVIDKKKIEPIPPLDHSSVDYEPFSKDFYEEPPSISGMSEQDVTDYRKS 165
GM+E+ SD KKK+ + L EP S +++ P + MS + + RK
Sbjct: 31 GMMEHLSD-------KKKLMSVGELARGITYTEPLST-WWKPPLHVRKMSTKQMDLIRKQ 82
Query: 166 LAIRVSGFDVPKPVKTFEDCGFPPPVMSAIKKQGYEKPTSIQCQALPVVLSGRDIIGIAK 225
I V+G D+P P+K F D FP P++ +K +G PT IQ Q LPVVLSGRD+IGIA
Sbjct: 83 WHITVNGEDIPPPIKNFMDMKFPSPLLRMLKDKGIMHPTPIQVQGLPVVLSGRDMIGIAF 142
Query: 226 TGSGKTAAFVLPMIVHIMDQP---ELQKEEGPIGVICAPTRELAQQIYLESKKFAKSY-- 280
TGSGKT FVLPMI+ + + + EGPI ++ P+RELA+Q Y ++F S
Sbjct: 143 TGSGKTLVFVLPMIILALQEEIMMPIAAGEGPIALVICPSRELAKQTYDVVEQFVASLVE 202
Query: 281 ----GIRVSAVYGGMSKLEQFKELKAGCEIVVATPGRLIDMLKMKALTMTRATYLVLDEA 336
+R GG+ Q +K G IVVATPGRL D+L K +++ L LDEA
Sbjct: 203 DGYPRLRSLLCIGGVDMRSQLDVVKKGVHIVVATPGRLKDILAKKKMSLDACRLLTLDEA 262
Query: 337 DRMFDLGFEPQVRSIVGQIRPDRQTSLFSATMPRKVEKLAREILSDPVRVIVGEVGMANE 396
DR+ DLGFE +R + + RQT LFSATMP K++ A L PV V VG G AN
Sbjct: 263 DRLVDLGFEDDIRHVFDHFKSQRQTLLFSATMPAKIQIFATSALVKPVTVNVGRAGAANL 322
Query: 397 DITQVVQVVPSDSXXXXXXXXXXXXTIDQGDTLVFASKKATVDDIETQLSQRGFKVAALH 456
D+ Q V+ V ++ T L+F KA VDDI L +G + A+H
Sbjct: 323 DVIQEVEYVKQEAKIVYLLECLQKTT---PPVLIFCENKADVDDIHEYLLLKGVEAVAIH 379
Query: 457 GDKDQASRMDILQKFKSGVYHVLIATDVAARGLDIKSIKTVVNFDIAKDMDMHVHRIGRT 516
G KDQ R + FK+G VL+ATDVA++GLD I+ V+N+D+ +++ +VHRIGRT
Sbjct: 380 GGKDQEDRDYAISLFKAGKKDVLVATDVASKGLDFPDIQHVINYDMPGEIENYVHRIGRT 439
Query: 517 GRAGDKEGVAYTLITQKEARFA-GELVNSLIAAGQNVSTELMDL 559
GR G K G+A T I + ++ +L + L A Q + L +L
Sbjct: 440 GRCG-KTGIATTFINKNQSEITLLDLKHLLQEAKQRIPPVLAEL 482
>AT1G31970.1 | Symbols: STRS1 | DEA(D/H)-box RNA helicase family
protein | chr1:11479921-11482707 FORWARD LENGTH=537
Length = 537
Score = 285 bits (729), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 161/386 (41%), Positives = 232/386 (60%), Gaps = 10/386 (2%)
Query: 179 VKTFEDCGFPPPVMSAIKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLPM 238
+KTF + P V+ K +EKP+ IQ P +L GRD+IGIAKTGSGKT AF +P
Sbjct: 115 LKTFAESNLPENVLDCCKT--FEKPSPIQSHTWPFLLDGRDLIGIAKTGSGKTLAFGIPA 172
Query: 239 IVHIMDQPEL----QKEEGPIGVICAPTRELAQQIYLESKKFAKSYGIRVSAVYGGMSKL 294
I+H++ + + K+ P ++ +PTRELA QI ++ + G++ VYGG SK
Sbjct: 173 IMHVLKKNKKIGGGSKKVNPTCLVLSPTRELAVQISDVLREAGEPCGLKSICVYGGSSKG 232
Query: 295 EQFKELKAGCEIVVATPGRLIDMLKMKALTMTRATYLVLDEADRMFDLGFEPQVRSIVGQ 354
Q +++G +IV+ TPGRL D+++ L ++ +++VLDEADRM D+GFE VR I+
Sbjct: 233 PQISAIRSGVDIVIGTPGRLRDLIESNVLRLSDVSFVVLDEADRMLDMGFEEPVRFILSN 292
Query: 355 IRPDRQTSLFSATMPRKVEKLAREILS-DPVRVIVGEVGM-ANEDITQVVQVVPSDSXXX 412
RQ +FSAT P V KLA+E + +P++VI+G V + AN D+ Q+++V+ +
Sbjct: 293 TNKVRQMVMFSATWPLDVHKLAQEFMDPNPIKVIIGSVDLAANHDVMQIIEVLDERARDQ 352
Query: 413 XXXXXXXXXTIDQGD-TLVFASKKATVDDIETQLSQRGFKVAALHGDKDQASRMDILQKF 471
Q + LVFA K + +E L QRG+K ++HG+K Q+ R L F
Sbjct: 353 RLIALLEKYHKSQKNRVLVFALYKVEAERLERFLQQRGWKAVSIHGNKAQSERTRSLSLF 412
Query: 472 KSGVYHVLIATDVAARGLDIKSIKTVVNFDIAKDMDMHVHRIGRTGRAGDKEGVAYTLIT 531
K G +L+ATDVAARGLDI ++ V+N+ + +VHRIGRTGRAG K+GVA+T T
Sbjct: 413 KEGSCPLLVATDVAARGLDIPDVEVVINYTFPLTTEDYVHRIGRTGRAG-KKGVAHTFFT 471
Query: 532 QKEARFAGELVNSLIAAGQNVSTELM 557
AGELVN L AGQ V +L+
Sbjct: 472 PLNKGLAGELVNVLREAGQVVPADLL 497
>AT1G28180.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:9843084-9845002
REVERSE LENGTH=614
Length = 614
Score = 247 bits (631), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 151/403 (37%), Positives = 218/403 (54%), Gaps = 53/403 (13%)
Query: 151 ISGMSEQDVTDYRKSLAIRVSGFDVPKPVKTFEDCGFPPPVMSAIKKQGYEKPTSIQCQA 210
+ M+E+D +++ I G +P P++ +E +
Sbjct: 198 LEEMNERDWRIFKEDFNISYRGSKIPHPMRNWE-------------------------ET 232
Query: 211 LPVVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELQKE---EGPIGVICAPTRELAQ 267
+P+ L RD+IGI+ TGSGKTAAFVLPM+ +I P +++E EGP ++ PTRELA
Sbjct: 233 IPLGLEQRDVIGISATGSGKTAAFVLPMLAYISRLPPMREENQTEGPYALVMVPTRELAH 292
Query: 268 QIYLESKKFAKSYGIRVSAVYGGMSKLEQFKELKAGCEIVVATPGRLIDMLKMKALTMTR 327
QI E+ KF++ G + ++ G S +Q +L GCEIV+ATPGRL+D L+ + + + +
Sbjct: 293 QIEEETVKFSRYLGFKAVSITGWESIEKQALKLSQGCEIVIATPGRLLDCLERRYVVLNQ 352
Query: 328 ATYLVLDEADRMFDLGFEPQVRSIVGQIRPD------------------RQTSLFSATMP 369
YLVLDEADRM D+ FEPQV ++ + P R T +FSATM
Sbjct: 353 CNYLVLDEADRMIDMDFEPQVSEVL-DVMPCSNLKPEKEDEELEEKKIYRTTYMFSATML 411
Query: 370 RKVEKLAREILSDPVRVIVGEVGMANEDITQVVQVVPSDSXXXXXXXXXXXXTIDQGDTL 429
VE+LAR+ L +PV V +GE + ITQ V ++ +S D +
Sbjct: 412 LSVERLARKFLRNPVVVTIGE---TTKFITQQV-IMTKESDKFSRLKKLIDDLGDDKTAI 467
Query: 430 VFASKKATVDDIETQLSQRG-FKVAALHGDKDQASRMDILQKFKSGVYHVLIATDVAARG 488
VF + + VD I L + G +V LH K Q R L++FK ++VL+ TDV RG
Sbjct: 468 VFVNTRNKVDYIVKNLEKVGRCRVTTLHAGKSQEQRDYSLEEFKKKRFNVLVTTDVLGRG 527
Query: 489 LDIKSIKTVVNFDIAKDMDMHVHRIGRTGRAGDKEGVAYTLIT 531
LDI + V+N+D+ MD++ HRIGRTGRAG K GVA T +T
Sbjct: 528 LDILDLAQVINYDMPNTMDLYTHRIGRTGRAG-KTGVATTFLT 569
>AT3G09720.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:2980483-2983268
REVERSE LENGTH=541
Length = 541
Score = 238 bits (606), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 136/402 (33%), Positives = 220/402 (54%), Gaps = 13/402 (3%)
Query: 163 RKSLAIRVSGFDVPKPVKTFEDC----GFPPPVMSAIKKQGYEKPTSIQCQALPVVLSGR 218
RK +I VSG ++P P+K+F + G ++ + + G+++PT IQ QA+P++LSGR
Sbjct: 120 RKQYSIHVSGNNIPPPLKSFAELSSRYGCEGYILRNLAELGFKEPTPIQRQAIPILLSGR 179
Query: 219 DIIGIAKTGSGKTAAFVLPMIVHIMDQPELQKEEGPIGVICAPTRELAQQIYLESKKFAK 278
+ A TGSGKT AF+ PM++ + +P +G VI +P RELA Q E KK K
Sbjct: 180 ECFACAPTGSGKTFAFICPMLIK-LKRPST---DGIRAVILSPARELAAQTAREGKKLIK 235
Query: 279 SYGIRVSAVYGGMSKLEQFKELKAGCEIVVATPGRLIDMLKMKALTMTRATYLVLDEADR 338
+ + + K F +L C+++++TP RL +K K + +++ YLVLDE+D+
Sbjct: 236 GSNFHIRLMTKPLVKTADFSKL--WCDVLISTPMRLKRAIKAKKIDLSKVEYLVLDESDK 293
Query: 339 MFDLGFEPQVRSIVGQI-RPDRQTSLFSATMPRKVEKLAREILSDPVRVIVGEVGMANED 397
+F+ Q+ +V P SLFSAT+P VE+LAR I+ D VRVI+G A+E
Sbjct: 294 LFEQSLLKQIDCVVKACSNPSIIRSLFSATLPDSVEELARSIMHDAVRVIIGRKNTASET 353
Query: 398 ITQVVQVVPSDSXXXXXXXXXXXXTIDQGDTLVFASKKATVDDIETQLSQRGFKVAALHG 457
+ Q + S+ +++ L+F K ++ +L + +H
Sbjct: 354 VKQKLVFAGSEEGKLLALRQSFAESLNP-PVLIFVQSKERAKELYDELKCENIRAGVIHS 412
Query: 458 DKDQASRMDILQKFKSGVYHVLIATDVAARGLDIKSIKTVVNFDIAKDMDMHVHRIGRTG 517
D R + + +F++G VLIATDV ARG+D K I V+N+D ++HRIGR+G
Sbjct: 413 DLPPGERENAVDQFRAGEKWVLIATDVIARGMDFKGINCVINYDFPDSASAYIHRIGRSG 472
Query: 518 RAGDKEGVAYTLITQKEARFAGELVNSLIAAGQNVSTELMDL 559
RAG + G A T T+++ F + N+++++G V + +M L
Sbjct: 473 RAG-RSGEAITFYTEQDVPFLRNIANTMMSSGCEVPSWIMSL 513
>AT1G77030.1 | Symbols: | hydrolases, acting on acid anhydrides, in
phosphorus-containing anhydrides;ATP-dependent
helicases;nucleic acid binding;ATP binding;RNA
binding;helicases | chr1:28947887-28951526 REVERSE
LENGTH=845
Length = 845
Score = 226 bits (575), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 130/356 (36%), Positives = 206/356 (57%), Gaps = 15/356 (4%)
Query: 182 FEDCGFPPPVMSAIKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLPMIVH 241
FE P V +AIKK+GY+ PT IQ + +P++LSG D++ +A+TGSGKTAAF++PM+
Sbjct: 30 FESLNLGPNVFNAIKKKGYKVPTPIQRKTMPLILSGVDVVAMARTGSGKTAAFLIPML-- 87
Query: 242 IMDQPELQKEEGPIG----VICAPTRELAQQIYLESKKFAKSYGIRVSAVYGGMSKLEQF 297
E K+ P G +I +PTR+LA+Q +K+ K +RVS + GG S +QF
Sbjct: 88 -----EKLKQHVPQGGVRALILSPTRDLAEQTLKFTKELGKFTDLRVSLLVGGDSMEDQF 142
Query: 298 KELKAGCEIVVATPGRLIDML-KMKALTMTRATYLVLDEADRMFDLGFEPQVRSIVGQIR 356
+EL G ++++ATPGRL+ +L ++ +T+ Y+V DEAD +F +GF Q+ I+ Q+
Sbjct: 143 EELTKGPDVIIATPGRLMHLLSEVDDMTLRTVEYVVFDEADSLFGMGFAEQLHQILTQLS 202
Query: 357 PDRQTSLFSATMPRKVEKLAREILSDPVRVIVGEVGMANEDIT-QVVQVVPSDSXXXXXX 415
+RQT LFSAT+P + + A+ L +P V + + D+ + V P +
Sbjct: 203 ENRQTLLFSATLPSALAEFAKAGLREPQLVRLDVENKISPDLKLSFLTVRPEEKYSALLY 262
Query: 416 XXXXXXTIDQGDTLVFASKKATVDDIETQLSQRGFKVAALHGDKDQASRMDILQKFKSGV 475
+ DQ TL+F S K V+ + + + + +GD DQ +R + +F++
Sbjct: 263 LVREHISSDQ-QTLIFVSTKHHVEFVNSLFKLENIEPSVCYGDMDQDARKIHVSRFRARK 321
Query: 476 YHVLIATDVAARGLDIKSIKTVVNFDIAKDMDMHVHRIGRTGRAGDKEGVAYTLIT 531
+LI TD+AARG+DI + V+N+D + VHR+GR RAG + G AY+ +T
Sbjct: 322 TMLLIVTDIAARGIDIPLLDNVINWDFPPRPKIFVHRVGRAARAG-RTGCAYSFVT 376
>AT3G22330.1 | Symbols: PMH2, ATRH53 | putative mitochondrial RNA
helicase 2 | chr3:7892641-7895145 FORWARD LENGTH=616
Length = 616
Score = 219 bits (559), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 124/355 (34%), Positives = 201/355 (56%), Gaps = 6/355 (1%)
Query: 184 DCGFPPPVMSAIKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLPMIVHIM 243
+ G P ++ A+ +G EK IQ L + GRD+IG A+TG+GKT AF +P+I I+
Sbjct: 108 ELGISPEIVKALSSKGIEKLFPIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIPIIDKII 167
Query: 244 D-QPELQKEEGPIGVICAPTRELAQQIYLESKKFAKSYGIRVSAVYGGMSKLEQFKELKA 302
+ + P+ ++ APTRELA+Q+ E ++ A S + +YGG +Q ++L
Sbjct: 168 KYNAKHGRGRNPLCLVLAPTRELARQVEKEFRESAPS--LDTICLYGGTPIGQQMRQLDY 225
Query: 303 GCEIVVATPGRLIDMLKMKALTMTRATYLVLDEADRMFDLGFEPQVRSIVGQIRPDRQTS 362
G ++ V TPGR+ID++K AL ++ ++VLDEAD+M +GF V I+ ++ RQ+
Sbjct: 226 GVDVAVGTPGRVIDLMKRGALNLSEVQFVVLDEADQMLQVGFAEDVEIILEKLPEKRQSM 285
Query: 363 LFSATMPRKVEKLAREILSDPVRV-IVGEVGMANEDITQVVQVVPSDSXXXXXXXXXXXX 421
+FSATMP + L ++ L++P+ V +VG+ D ++
Sbjct: 286 MFSATMPSWIRSLTKKYLNNPLTVDLVGDSDQKLADGITTYSIIADSYGRASIIGPLVTE 345
Query: 422 TIDQGDTLVFASKKATVDDIETQLSQRGFKVAALHGDKDQASRMDILQKFKSGVYHVLIA 481
G +VF K D + L+ R FK ALHGD Q+ R L F+ G +++L+A
Sbjct: 346 HAKGGKCIVFTQTKRDADRLSYALA-RSFKCEALHGDISQSQRERTLAGFRDGHFNILVA 404
Query: 482 TDVAARGLDIKSIKTVVNFDIAKDMDMHVHRIGRTGRAGDKEGVAYTLITQKEAR 536
TDVAARGLD+ ++ ++++++ + + VHR GRTGRAG K+G A + +Q ++R
Sbjct: 405 TDVAARGLDVPNVDLIIHYELPNNTETFVHRTGRTGRAG-KKGSAILIYSQDQSR 458
>AT5G60990.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr5:24546601-24549148 REVERSE LENGTH=456
Length = 456
Score = 218 bits (556), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 125/367 (34%), Positives = 202/367 (55%), Gaps = 11/367 (2%)
Query: 179 VKTFEDCGFPPPVMSAIKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLPM 238
VKTF + G ++ A ++ G++ P+ IQ +ALP L G+D+IG+A+TGSGKT AF +P+
Sbjct: 8 VKTFAELGVREELVKACERLGWKNPSKIQAEALPFALEGKDVIGLAQTGSGKTGAFAIPI 67
Query: 239 IVHIMD-----QPELQKEEGPIGVIC--APTRELAQQIYLESKKFAKSYGIRVSAVYGGM 291
+ +++ +P+ + P C +PTRELA QI + + +R + + GG+
Sbjct: 68 LQALLEYVYDSEPKKGRRPDPAFFACVLSPTRELAIQIAEQFEALGADISLRCAVLVGGI 127
Query: 292 SKLEQFKELKAGCEIVVATPGRLID-MLKMKALTMTRATYLVLDEADRMFDLGFEPQVRS 350
+++Q L ++VATPGRL D M K ++ YLVLDEADR+ + FE +
Sbjct: 128 DRMQQTIALGKRPHVIVATPGRLWDHMSDTKGFSLKSLKYLVLDEADRLLNEDFEKSLNQ 187
Query: 351 IVGQIRPDRQTSLFSATMPRKVEKLAREILSDPVRVIVGEVGMANEDITQVVQVVPSDSX 410
I+ +I +R+T LFSATM +KV KL R L +PV++ + + Q + V +
Sbjct: 188 ILEEIPLERKTFLFSATMTKKVRKLQRACLRNPVKIEAASKYSTVDTLKQQYRFVAAK-- 245
Query: 411 XXXXXXXXXXXTIDQGDTLVFASKKATVDDIETQLSQRGFKVAALHGDKDQASRMDILQK 470
+ + +++F + L GF+ + G Q+ R+ L K
Sbjct: 246 YKDCYLVYILSEMPESTSMIFTRTCDGTRFLALVLRSLGFRAIPISGQMTQSKRLGALNK 305
Query: 471 FKSGVYHVLIATDVAARGLDIKSIKTVVNFDIAKDMDMHVHRIGRTGRAGDKEGVAYTLI 530
FK+G ++L+ TDVA+RGLDI S+ V+N+DI + ++HR+GRT RAG + GV +L+
Sbjct: 306 FKAGECNILVCTDVASRGLDIPSVDVVINYDIPTNSKDYIHRVGRTARAG-RSGVGISLV 364
Query: 531 TQKEARF 537
Q E +
Sbjct: 365 NQYELEW 371
>AT4G16630.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr4:9362176-9366449 REVERSE LENGTH=789
Length = 789
Score = 217 bits (552), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 129/353 (36%), Positives = 197/353 (55%), Gaps = 5/353 (1%)
Query: 181 TFEDCGFPPPVMSAIKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLPMIV 240
TF + P++ A + GY+KPT IQ +P+ L+GRD+ A TGSGKTAAF LP +
Sbjct: 168 TFMELNLSRPLLRACETLGYKKPTPIQAACIPLALTGRDLCASAITGSGKTAAFALPTLE 227
Query: 241 HIMDQPELQKEEGPIGVICAPTRELAQQIYLESKKFAKSYGIRVSAVYGGMSKLEQFKEL 300
++ +P ++ +I PTRELA QI+ + A+ I+ + GG+S EQ L
Sbjct: 228 RLLFRP--KRVFATRVLILTPTRELAVQIHSMIQNLAQFTDIKCGLIVGGLSVREQEVVL 285
Query: 301 KAGCEIVVATPGRLIDMLKMK-ALTMTRATYLVLDEADRMFDLGFEPQVRSIVGQIRPDR 359
++ +IVVATPGR+ID L+ ++ + L+LDEADR+ GF ++ +V R
Sbjct: 286 RSMPDIVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLQTGFATEITELVRLCPKRR 345
Query: 360 QTSLFSATMPRKVEKLAREILSDPVRVIVGEVGMANEDITQ-VVQVVPSDSXXXXXXXXX 418
QT LFSATM +V++L + L+ P+R+ +T+ VV++ +
Sbjct: 346 QTMLFSATMTEEVKELVKLSLNKPLRLSADPSARRPPGLTEEVVRIRRTREANQEAVLLS 405
Query: 419 XXXTIDQGDTLVFASKKATVDDIETQLSQRGFKVAALHGDKDQASRMDILQKFKSGVYHV 478
+ ++F+ K ++ G K A LHG+ QA R+D L+ F+
Sbjct: 406 LCTRTFKSKVIIFSGTKQAAHRLKILFGLAGLKAAELHGNLTQAQRLDSLELFRKQEVDF 465
Query: 479 LIATDVAARGLDIKSIKTVVNFDIAKDMDMHVHRIGRTGRAGDKEGVAYTLIT 531
LIATDVAARGLDI ++TV+N+ +++D +VHR+GRT RAG +EG A T +T
Sbjct: 466 LIATDVAARGLDIIGVQTVINYACPREIDSYVHRVGRTARAG-REGYAVTFVT 517
>AT3G22310.1 | Symbols: PMH1, ATRH9 | putative mitochondrial RNA
helicase 1 | chr3:7887382-7889806 FORWARD LENGTH=610
Length = 610
Score = 216 bits (549), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 126/355 (35%), Positives = 199/355 (56%), Gaps = 6/355 (1%)
Query: 184 DCGFPPPVMSAIKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLPMIVHIM 243
D G P ++ A+K +G EK IQ L + GRD+IG A+TG+GKT AF +P+I I+
Sbjct: 120 DLGISPEIVKALKGRGIEKLFPIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIPIIDKII 179
Query: 244 D-QPELQKEEGPIGVICAPTRELAQQIYLESKKFAKSYGIRVSAVYGGMSKLEQFKELKA 302
+ + + P ++ APTRELA+Q+ E ++ A S + +YGG +Q +EL
Sbjct: 180 KFNAKHGRGKNPQCLVLAPTRELARQVEKEFRESAPS--LDTICLYGGTPIGQQMRELNY 237
Query: 303 GCEIVVATPGRLIDMLKMKALTMTRATYLVLDEADRMFDLGFEPQVRSIVGQIRPDRQTS 362
G ++ V TPGR+ID++K AL ++ ++VLDEAD+M +GF V I+ ++ RQ+
Sbjct: 238 GIDVAVGTPGRIIDLMKRGALNLSEVQFVVLDEADQMLQVGFAEDVEIILQKLPAKRQSM 297
Query: 363 LFSATMPRKVEKLAREILSDPVRV-IVGEVGMANEDITQVVQVVPSDSXXXXXXXXXXXX 421
+FSATMP + L ++ L++P+ + +VG+ D + +
Sbjct: 298 MFSATMPSWIRSLTKKYLNNPLTIDLVGDSDQKLADGITMYSIAADSYGRASIIGPLVKE 357
Query: 422 TIDQGDTLVFASKKATVDDIETQLSQRGFKVAALHGDKDQASRMDILQKFKSGVYHVLIA 481
G +VF K D + L+ + +K ALHGD QA R L F+ G + +L+A
Sbjct: 358 HGKGGKCIVFTQTKRDADRLAFGLA-KSYKCEALHGDISQAQRERTLAGFRDGNFSILVA 416
Query: 482 TDVAARGLDIKSIKTVVNFDIAKDMDMHVHRIGRTGRAGDKEGVAYTLITQKEAR 536
TDVAARGLD+ ++ V+++++ + + VHR GRTGRAG K+G A + Q + R
Sbjct: 417 TDVAARGLDVPNVDLVIHYELPNNTETFVHRTGRTGRAG-KKGSAILIHGQDQTR 470
>AT5G26742.2 | Symbols: emb1138 | DEAD box RNA helicase (RH3) |
chr5:9285540-9288871 REVERSE LENGTH=748
Length = 748
Score = 214 bits (544), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 134/356 (37%), Positives = 197/356 (55%), Gaps = 10/356 (2%)
Query: 187 FPPPVMSAIKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQP 246
P + +++K+G IQ L L GRDII AKTG+GKT AF +P+I + ++
Sbjct: 109 LPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRLTEEA 168
Query: 247 ---ELQKEEG--PIGVICAPTRELAQQIYLESKKFAKSYGIRVSAVYGGMSKLEQFKELK 301
+ G P ++ APTRELA+Q+ E K+ A + VYGG+S Q L
Sbjct: 169 GDYTAFRRSGRLPKFLVLAPTRELAKQVEKEIKESAPY--LSTVCVYGGVSYTIQQSALT 226
Query: 302 AGCEIVVATPGRLIDMLKMKALTMTRATYLVLDEADRMFDLGFEPQVRSIVGQIRPDRQT 361
G ++VV TPGR+ID+++ ++L + YLVLDEAD+M +GFE V SI+ + RQ+
Sbjct: 227 RGVDVVVGTPGRIIDLIEGRSLKLGEVEYLVLDEADQMLAVGFEEAVESILENLPTKRQS 286
Query: 362 SLFSATMPRKVEKLAREILSDPVRV-IVGEVGMANEDITQVVQVVPSDSXXXXXXXXXXX 420
LFSATMP V+KLAR+ L +P+ + +VG+ + ++ + + +
Sbjct: 287 MLFSATMPTWVKKLARKYLDNPLNIDLVGDQDEKLAEGIKLYAIATTSTSKRTILSDLIT 346
Query: 421 XTIDQGDTLVFASKKATVDDIETQLSQRGFKVAALHGDKDQASRMDILQKFKSGVYHVLI 480
G T+VF K D++ LS ALHGD Q R L F+ G + VL+
Sbjct: 347 VYAKGGKTIVFTQTKRDADEVSLALSN-SIATEALHGDISQHQRERTLNAFRQGKFTVLV 405
Query: 481 ATDVAARGLDIKSIKTVVNFDIAKDMDMHVHRIGRTGRAGDKEGVAYTLITQKEAR 536
ATDVA+RGLDI ++ V+++++ D + VHR GRTGRAG KEG A + T + R
Sbjct: 406 ATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAG-KEGSAILMHTSSQKR 460
>AT5G26742.1 | Symbols: emb1138 | DEAD box RNA helicase (RH3) |
chr5:9285540-9288871 REVERSE LENGTH=747
Length = 747
Score = 214 bits (544), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 134/356 (37%), Positives = 197/356 (55%), Gaps = 10/356 (2%)
Query: 187 FPPPVMSAIKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQP 246
P + +++K+G IQ L L GRDII AKTG+GKT AF +P+I + ++
Sbjct: 109 LPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRLTEEA 168
Query: 247 ---ELQKEEG--PIGVICAPTRELAQQIYLESKKFAKSYGIRVSAVYGGMSKLEQFKELK 301
+ G P ++ APTRELA+Q+ E K+ A + VYGG+S Q L
Sbjct: 169 GDYTAFRRSGRLPKFLVLAPTRELAKQVEKEIKESAPY--LSTVCVYGGVSYTIQQSALT 226
Query: 302 AGCEIVVATPGRLIDMLKMKALTMTRATYLVLDEADRMFDLGFEPQVRSIVGQIRPDRQT 361
G ++VV TPGR+ID+++ ++L + YLVLDEAD+M +GFE V SI+ + RQ+
Sbjct: 227 RGVDVVVGTPGRIIDLIEGRSLKLGEVEYLVLDEADQMLAVGFEEAVESILENLPTKRQS 286
Query: 362 SLFSATMPRKVEKLAREILSDPVRV-IVGEVGMANEDITQVVQVVPSDSXXXXXXXXXXX 420
LFSATMP V+KLAR+ L +P+ + +VG+ + ++ + + +
Sbjct: 287 MLFSATMPTWVKKLARKYLDNPLNIDLVGDQDEKLAEGIKLYAIATTSTSKRTILSDLIT 346
Query: 421 XTIDQGDTLVFASKKATVDDIETQLSQRGFKVAALHGDKDQASRMDILQKFKSGVYHVLI 480
G T+VF K D++ LS ALHGD Q R L F+ G + VL+
Sbjct: 347 VYAKGGKTIVFTQTKRDADEVSLALSN-SIATEALHGDISQHQRERTLNAFRQGKFTVLV 405
Query: 481 ATDVAARGLDIKSIKTVVNFDIAKDMDMHVHRIGRTGRAGDKEGVAYTLITQKEAR 536
ATDVA+RGLDI ++ V+++++ D + VHR GRTGRAG KEG A + T + R
Sbjct: 406 ATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAG-KEGSAILMHTSSQKR 460
>AT3G13920.1 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translation
initiation factor 4A1 | chr3:4592635-4594128 REVERSE
LENGTH=412
Length = 412
Score = 212 bits (540), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 126/358 (35%), Positives = 199/358 (55%), Gaps = 9/358 (2%)
Query: 180 KTFEDCGFPPPVMSAIKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLPMI 239
++F+ G ++ I G+EKP++IQ + + G D+I A++G+GKTA F +
Sbjct: 39 ESFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFC-SGV 97
Query: 240 VHIMDQPELQKEEGPIGVICAPTRELAQQIYLESKKFAKSYGIRVSAVYGGMSKLEQFKE 299
+ +D +Q + ++ APTRELAQQI + G++V A GG S E +
Sbjct: 98 LQQLDFSLIQCQ----ALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRI 153
Query: 300 LKAGCEIVVATPGRLIDMLKMKALTMTRATYLVLDEADRMFDLGFEPQVRSIVGQIRPDR 359
L+AG +VV TPGR+ DMLK ++L VLDEAD M GF+ Q+ I + P
Sbjct: 154 LQAGVHVVVGTPGRVFDMLKRQSLRADNIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKI 213
Query: 360 QTSLFSATMPRKVEKLAREILSDPVRVIVGEVGMANEDITQV-VQVVPSDSXXXXXXXXX 418
Q +FSATMP + ++ R+ +S PVR++V + E I Q V V +
Sbjct: 214 QVGVFSATMPPEALEITRKFMSKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLY 273
Query: 419 XXXTIDQGDTLVFASKKATVDDIETQLSQRGFKVAALHGDKDQASRMDILQKFKSGVYHV 478
I Q +++F + + VD + ++ R V+A HGD DQ +R I+++F+SG V
Sbjct: 274 ETLAITQ--SVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRV 331
Query: 479 LIATDVAARGLDIKSIKTVVNFDIAKDMDMHVHRIGRTGRAGDKEGVAYTLITQKEAR 536
LI TD+ ARG+D++ + V+NFD+ + ++HRIGR+GR G ++GVA +T+ + R
Sbjct: 332 LITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFG-RKGVAINFVTRDDER 388
>AT3G13920.3 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translation
initiation factor 4A1 | chr3:4592635-4594094 REVERSE
LENGTH=402
Length = 402
Score = 212 bits (540), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 126/358 (35%), Positives = 199/358 (55%), Gaps = 9/358 (2%)
Query: 180 KTFEDCGFPPPVMSAIKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLPMI 239
++F+ G ++ I G+EKP++IQ + + G D+I A++G+GKTA F +
Sbjct: 29 ESFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFC-SGV 87
Query: 240 VHIMDQPELQKEEGPIGVICAPTRELAQQIYLESKKFAKSYGIRVSAVYGGMSKLEQFKE 299
+ +D +Q + ++ APTRELAQQI + G++V A GG S E +
Sbjct: 88 LQQLDFSLIQCQ----ALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRI 143
Query: 300 LKAGCEIVVATPGRLIDMLKMKALTMTRATYLVLDEADRMFDLGFEPQVRSIVGQIRPDR 359
L+AG +VV TPGR+ DMLK ++L VLDEAD M GF+ Q+ I + P
Sbjct: 144 LQAGVHVVVGTPGRVFDMLKRQSLRADNIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKI 203
Query: 360 QTSLFSATMPRKVEKLAREILSDPVRVIVGEVGMANEDITQV-VQVVPSDSXXXXXXXXX 418
Q +FSATMP + ++ R+ +S PVR++V + E I Q V V +
Sbjct: 204 QVGVFSATMPPEALEITRKFMSKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLY 263
Query: 419 XXXTIDQGDTLVFASKKATVDDIETQLSQRGFKVAALHGDKDQASRMDILQKFKSGVYHV 478
I Q +++F + + VD + ++ R V+A HGD DQ +R I+++F+SG V
Sbjct: 264 ETLAITQ--SVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRV 321
Query: 479 LIATDVAARGLDIKSIKTVVNFDIAKDMDMHVHRIGRTGRAGDKEGVAYTLITQKEAR 536
LI TD+ ARG+D++ + V+NFD+ + ++HRIGR+GR G ++GVA +T+ + R
Sbjct: 322 LITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFG-RKGVAINFVTRDDER 378
>AT3G13920.2 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translation
initiation factor 4A1 | chr3:4592586-4594128 REVERSE
LENGTH=415
Length = 415
Score = 212 bits (540), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 127/358 (35%), Positives = 198/358 (55%), Gaps = 9/358 (2%)
Query: 180 KTFEDCGFPPPVMSAIKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLPMI 239
++F+ G ++ I G+EKP++IQ + + G D+I A++G+GKTA F +
Sbjct: 39 ESFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFC-SGV 97
Query: 240 VHIMDQPELQKEEGPIGVICAPTRELAQQIYLESKKFAKSYGIRVSAVYGGMSKLEQFKE 299
+ +D +Q + ++ APTRELAQQI + G++V A GG S E +
Sbjct: 98 LQQLDFSLIQCQ----ALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRI 153
Query: 300 LKAGCEIVVATPGRLIDMLKMKALTMTRATYLVLDEADRMFDLGFEPQVRSIVGQIRPDR 359
L+AG +VV TPGR+ DMLK ++L VLDEAD M GF+ Q+ I + P
Sbjct: 154 LQAGVHVVVGTPGRVFDMLKRQSLRADNIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKI 213
Query: 360 QTSLFSATMPRKVEKLAREILSDPVRVIVGEVGMANEDITQV-VQVVPSDSXXXXXXXXX 418
Q +FSATMP + ++ R+ +S PVR++V + E I Q V V +
Sbjct: 214 QVGVFSATMPPEALEITRKFMSKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLY 273
Query: 419 XXXTIDQGDTLVFASKKATVDDIETQLSQRGFKVAALHGDKDQASRMDILQKFKSGVYHV 478
I Q +++F + + VD + ++ R V+A HGD DQ +R I+++F+SG V
Sbjct: 274 ETLAITQ--SVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRV 331
Query: 479 LIATDVAARGLDIKSIKTVVNFDIAKDMDMHVHRIGRTGRAGDKEGVAYTLITQKEAR 536
LI TD+ ARG+D++ + V+NFD+ + ++HRIGR+GR G K GVA +T+ + R
Sbjct: 332 LITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRK-GVAINFVTRDDER 388
>AT3G02065.3 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:359136-360734
FORWARD LENGTH=505
Length = 505
Score = 212 bits (539), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 132/423 (31%), Positives = 213/423 (50%), Gaps = 13/423 (3%)
Query: 144 FYEEPPSISGMSEQDVTDYRKSLAIRVSG--FDVPKPVKTFEDCGFPPPVMSAIKKQGYE 201
FY P G S D R+ L I V G VP PV TF CG PP ++ ++ GY+
Sbjct: 75 FYVRDP---GSSSHDAQLLRRKLDIHVQGQGSAVPPPVLTFTSCGLPPKLLLNLETAGYD 131
Query: 202 KPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLPMI----VHIMDQPELQKEEGPIGV 257
PT IQ QA+P L+G+ ++ A TGSGKTA+F++P+I + + P Q+ P+ +
Sbjct: 132 FPTPIQMQAIPAALTGKSLLASADTGSGKTASFLVPIISRCTTYHSEHPSDQRRN-PLAM 190
Query: 258 ICAPTRELAQQIYLESKKFAKSYGIRVSAVYGGMSKLEQFKELKAGCEIVVATPGRLIDM 317
+ APTREL Q+ ++K K + + V GG Q ++ G E+++ TPGR++D+
Sbjct: 191 VLAPTRELCVQVEDQAKMLGKGLPFKTALVVGGDPMSGQLYRIQQGVELIIGTPGRVVDL 250
Query: 318 LKMKALTMTRATYLVLDEADRMFDLGFEPQVRSIVGQIRPDRQTSLFSATMPRKVEKLAR 377
L + + VLDE D M GF QV I Q Q LFSAT+ R+VEK+
Sbjct: 251 LSKHTIELDNIMTFVLDEVDCMLQRGFRDQVMQIF-QALSQPQVLLFSATISREVEKVGG 309
Query: 378 EILSDPVRVIVGEVGMANEDITQVVQVVPSDSXXXXXXXXXXXXTIDQGDTLVFASKKAT 437
+ + + V +G N+ + Q+ V + + +V+ S +
Sbjct: 310 SLAKEIILVSIGNPNKPNKAVNQLAIWVDAKQKKQKLFDILRSQNHFKPPAVVYVSSRVG 369
Query: 438 VDDIETQLS-QRGFKVAALHGDKDQASRMDILQKFKSGVYHVLIATDVAARGLDIKSIKT 496
D + ++ G K ++HG+K R D++ F G VL++T V RG+D+ ++
Sbjct: 370 ADLLANAITVVTGVKALSIHGEKPMKERRDVMGSFLGGEVPVLVSTGVLGRGVDLLVVRQ 429
Query: 497 VVNFDIAKDMDMHVHRIGRTGRAGDKEGVAYTLITQKEARFAGELVNSLIAAGQNVSTEL 556
V+ FD+ + ++H IGR R G+K G A + + + +LV +L ++G + EL
Sbjct: 430 VIVFDMPSTIKEYIHVIGRASRMGEK-GTAIVFVNEDDRNLFPDLVAALKSSGAAIPKEL 488
Query: 557 MDL 559
++L
Sbjct: 489 INL 491
>AT3G02065.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:359136-360734
FORWARD LENGTH=505
Length = 505
Score = 212 bits (539), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 132/423 (31%), Positives = 213/423 (50%), Gaps = 13/423 (3%)
Query: 144 FYEEPPSISGMSEQDVTDYRKSLAIRVSG--FDVPKPVKTFEDCGFPPPVMSAIKKQGYE 201
FY P G S D R+ L I V G VP PV TF CG PP ++ ++ GY+
Sbjct: 75 FYVRDP---GSSSHDAQLLRRKLDIHVQGQGSAVPPPVLTFTSCGLPPKLLLNLETAGYD 131
Query: 202 KPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLPMI----VHIMDQPELQKEEGPIGV 257
PT IQ QA+P L+G+ ++ A TGSGKTA+F++P+I + + P Q+ P+ +
Sbjct: 132 FPTPIQMQAIPAALTGKSLLASADTGSGKTASFLVPIISRCTTYHSEHPSDQRRN-PLAM 190
Query: 258 ICAPTRELAQQIYLESKKFAKSYGIRVSAVYGGMSKLEQFKELKAGCEIVVATPGRLIDM 317
+ APTREL Q+ ++K K + + V GG Q ++ G E+++ TPGR++D+
Sbjct: 191 VLAPTRELCVQVEDQAKMLGKGLPFKTALVVGGDPMSGQLYRIQQGVELIIGTPGRVVDL 250
Query: 318 LKMKALTMTRATYLVLDEADRMFDLGFEPQVRSIVGQIRPDRQTSLFSATMPRKVEKLAR 377
L + + VLDE D M GF QV I Q Q LFSAT+ R+VEK+
Sbjct: 251 LSKHTIELDNIMTFVLDEVDCMLQRGFRDQVMQIF-QALSQPQVLLFSATISREVEKVGG 309
Query: 378 EILSDPVRVIVGEVGMANEDITQVVQVVPSDSXXXXXXXXXXXXTIDQGDTLVFASKKAT 437
+ + + V +G N+ + Q+ V + + +V+ S +
Sbjct: 310 SLAKEIILVSIGNPNKPNKAVNQLAIWVDAKQKKQKLFDILRSQNHFKPPAVVYVSSRVG 369
Query: 438 VDDIETQLS-QRGFKVAALHGDKDQASRMDILQKFKSGVYHVLIATDVAARGLDIKSIKT 496
D + ++ G K ++HG+K R D++ F G VL++T V RG+D+ ++
Sbjct: 370 ADLLANAITVVTGVKALSIHGEKPMKERRDVMGSFLGGEVPVLVSTGVLGRGVDLLVVRQ 429
Query: 497 VVNFDIAKDMDMHVHRIGRTGRAGDKEGVAYTLITQKEARFAGELVNSLIAAGQNVSTEL 556
V+ FD+ + ++H IGR R G+K G A + + + +LV +L ++G + EL
Sbjct: 430 VIVFDMPSTIKEYIHVIGRASRMGEK-GTAIVFVNEDDRNLFPDLVAALKSSGAAIPKEL 488
Query: 557 MDL 559
++L
Sbjct: 489 INL 491
>AT1G54270.1 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-20262018
FORWARD LENGTH=412
Length = 412
Score = 211 bits (537), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 127/358 (35%), Positives = 198/358 (55%), Gaps = 9/358 (2%)
Query: 180 KTFEDCGFPPPVMSAIKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLPMI 239
++F+ G ++ I G+EKP++IQ + + G D+I A++G+GKTA F +
Sbjct: 39 ESFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFC-SGV 97
Query: 240 VHIMDQPELQKEEGPIGVICAPTRELAQQIYLESKKFAKSYGIRVSAVYGGMSKLEQFKE 299
+ +D LQ + ++ APTRELAQQI + G++V A GG S E +
Sbjct: 98 LQQLDYALLQCQ----ALVLAPTRELAQQIEKVMRALGDYQGVKVHACVGGTSVREDQRI 153
Query: 300 LKAGCEIVVATPGRLIDMLKMKALTMTRATYLVLDEADRMFDLGFEPQVRSIVGQIRPDR 359
L+AG +VV TPGR+ DML+ ++L VLDEAD M GF+ Q+ I + P
Sbjct: 154 LQAGVHVVVGTPGRVFDMLRRQSLRPDCIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKI 213
Query: 360 QTSLFSATMPRKVEKLAREILSDPVRVIVGEVGMANEDITQV-VQVVPSDSXXXXXXXXX 418
Q +FSATMP + ++ R+ +S PVR++V + E I Q V V D
Sbjct: 214 QVGVFSATMPPEALEITRKFMSKPVRILVKRDELTLEGIKQFYVNVEKEDWKLETLCDLY 273
Query: 419 XXXTIDQGDTLVFASKKATVDDIETQLSQRGFKVAALHGDKDQASRMDILQKFKSGVYHV 478
I Q +++F + + VD + ++ R V+A HGD DQ +R I+++F+SG V
Sbjct: 274 ETLAITQ--SVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRV 331
Query: 479 LIATDVAARGLDIKSIKTVVNFDIAKDMDMHVHRIGRTGRAGDKEGVAYTLITQKEAR 536
LI TD+ ARG+D++ + V+NFD+ + ++HRIGR+GR G ++GVA +T + R
Sbjct: 332 LITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFG-RKGVAINFVTLDDQR 388
>AT3G19760.1 | Symbols: EIF4A-III | eukaryotic initiation factor
4A-III | chr3:6863790-6866242 FORWARD LENGTH=408
Length = 408
Score = 210 bits (535), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 116/355 (32%), Positives = 198/355 (55%), Gaps = 9/355 (2%)
Query: 177 KPVKTFEDCGFPPPVMSAIKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVL 236
+P+ +F D G V+ + + G+EKP++IQ +A+ +L GRD+I A++G+GKT+ L
Sbjct: 32 EPITSFNDMGIKEDVLRGVYEYGFEKPSAIQQRAVMPILQGRDVIAQAQSGTGKTSMIAL 91
Query: 237 PMIVHIMDQPELQKEEGPIGVICAPTRELAQQIYLESKKFAKSYGIRVSAVYGGMSKLEQ 296
+ ++D + + +I +PTRELA Q + I+ A GG S E
Sbjct: 92 S-VCQVVDTSSREVQ----ALILSPTRELATQTEKTIQAIGLHANIQAHACIGGNSVGED 146
Query: 297 FKELKAGCEIVVATPGRLIDMLKMKALTMTRATYLVLDEADRMFDLGFEPQVRSIVGQIR 356
++L+ G +V TPGR+ DM+K ++L L+LDE+D M GF+ Q+ + +
Sbjct: 147 IRKLEHGVHVVSGTPGRVCDMIKRRSLRTRAIKLLILDESDEMLSRGFKDQIYDVYRYLP 206
Query: 357 PDRQTSLFSATMPRKVEKLAREILSDPVRVIVGEVGMANEDITQ-VVQVVPSDSXXXXXX 415
PD Q L SAT+P ++ ++ + +++PV+++V + E I Q V V +
Sbjct: 207 PDLQVCLVSATLPHEILEMTSKFMTEPVKILVKRDELTLEGIKQFFVAVEKEEWKFDTLC 266
Query: 416 XXXXXXTIDQGDTLVFASKKATVDDIETQLSQRGFKVAALHGDKDQASRMDILQKFKSGV 475
TI Q ++F + K VD + ++ F V+++HGD Q R I+ +F+SG
Sbjct: 267 DLYDTLTITQA--VIFCNTKRKVDYLSEKMRSHNFTVSSMHGDMPQKERDAIMNEFRSGD 324
Query: 476 YHVLIATDVAARGLDIKSIKTVVNFDIAKDMDMHVHRIGRTGRAGDKEGVAYTLI 530
VLI TDV ARG+D++ + V+N+D+ + ++++HRIGR+GR G ++GVA +
Sbjct: 325 SRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFG-RKGVAINFV 378
>AT1G51380.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:19047960-19049967 FORWARD LENGTH=392
Length = 392
Score = 208 bits (530), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 124/357 (34%), Positives = 201/357 (56%), Gaps = 13/357 (3%)
Query: 177 KPVKTFEDCGFPPPVMSAIKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTA--AF 234
KP+K+F+D G V+ + GY+KP+ IQ +AL +L GRD+I A++G+GKT+ A
Sbjct: 19 KPIKSFDDMGMNDKVLRGVYDYGYKKPSEIQQRALVPILKGRDVIAQAQSGTGKTSMIAI 78
Query: 235 VLPMIVHIMDQPELQKEEGPIGVICAPTRELAQQIYLESKKFAKSYGIRVSAVYGGMSKL 294
+ IV+I + ++Q ++ +P+RELA Q + I+ A GG S
Sbjct: 79 SVCQIVNISSR-KVQV------LVLSPSRELASQTEKTIQAIGAHTNIQAHACIGGKSIG 131
Query: 295 EQFKELKAGCEIVVATPGRLIDMLKMKALTMTRATYLVLDEADRMFDLGFEPQVRSIVGQ 354
E K+L+ G V TPGR+ DM+K +L LVLDE+D M G + Q+ +
Sbjct: 132 EDIKKLERGVHAVSGTPGRVYDMIKRGSLQTKAVKLLVLDESDEMLSKGLKDQIYDVYRA 191
Query: 355 IRPDRQTSLFSATMPRKVEKLAREILSDPVRVIVGEVGMANEDITQ-VVQVVPSDSXXXX 413
+ D Q L SAT+P+++ ++ + ++DPVR++V + E I Q V V +
Sbjct: 192 LPHDIQVCLISATLPQEILEMTEKFMTDPVRILVKPDELTLEGIKQYYVDVDKEEWKFDT 251
Query: 414 XXXXXXXXTIDQGDTLVFASKKATVDDIETQLSQRGFKVAALHGDKDQASRMDILQKFKS 473
TI+Q ++F + + VD + ++ F V+++HGDK Q R DI+ +F+S
Sbjct: 252 LCDLYGRLTINQA--IIFCNTRQKVDWLTEKMRSSNFIVSSMHGDKRQKERDDIMNQFRS 309
Query: 474 GVYHVLIATDVAARGLDIKSIKTVVNFDIAKDMDMHVHRIGRTGRAGDKEGVAYTLI 530
VLIA+DV ARG+D++++ V+N+DI + ++++HRIGR GR G +EGVA +
Sbjct: 310 FKSRVLIASDVWARGIDVQTVSHVINYDIPNNPELYIHRIGRAGRFG-REGVAINFV 365
>AT1G16280.1 | Symbols: RH36, AtRH36, SWA3 | RNA helicase 36 |
chr1:5568482-5570487 REVERSE LENGTH=491
Length = 491
Score = 207 bits (528), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 128/362 (35%), Positives = 194/362 (53%), Gaps = 14/362 (3%)
Query: 182 FEDCGFPPPVMSAIKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLPMIVH 241
FE G + K+ G KPT +Q +P +L+GRD++G+A+TGSGKTAAF LP++
Sbjct: 60 FEGLGLAEWAVETCKELGMRKPTPVQTHCVPKILAGRDVLGLAQTGSGKTAAFALPILHR 119
Query: 242 IMDQPELQKEEGPIGVICAPTRELAQQIYLESKKFAKSYGIRVSAVYGGMSKLEQFKELK 301
+ + P G ++ PTRELA Q+ + K +R S + GGM L Q L
Sbjct: 120 LAEDPY-----GVFALVVTPTRELAFQLAEQFKALGSCLNLRCSVIVGGMDMLTQTMSLV 174
Query: 302 AGCEIVVATPGRLIDMLKMKA---LTMTRATYLVLDEADRMFDLGFEPQVRSIVGQIRPD 358
+ IV+ TPGR+ +L+ +R +LVLDEADR+ D+GF+ ++R+I +
Sbjct: 175 SRPHIVITTPGRIKVLLENNPDVPPVFSRTKFLVLDEADRVLDVGFQDELRTIFQCLPKS 234
Query: 359 RQTSLFSATMPRKVEKLAREILSDPVRVIVGEVGMANEDITQVVQVVPSDSXXXXXXXXX 418
RQT LFSATM ++ L E S+ G+ D T Q + D
Sbjct: 235 RQTLLFSATMTSNLQALL-EHSSNKAYFYEAYEGLKTVD-TLTQQFIFEDKDAKELYLVH 292
Query: 419 XXXTI-DQG--DTLVFASKKATVDDIETQLSQRGFKVAALHGDKDQASRMDILQKFKSGV 475
+ D+G ++F S T + L + + A+H Q+ R+ L KFKSG
Sbjct: 293 ILSQMEDKGIRSAMIFVSTCRTCQRLSLMLDELEVENIAMHSLNSQSMRLSALSKFKSGK 352
Query: 476 YHVLIATDVAARGLDIKSIKTVVNFDIAKDMDMHVHRIGRTGRAGDKEGVAYTLITQKEA 535
+L+ATDVA+RGLDI ++ V+N+DI +D +VHR+GRT RAG + G+A ++IT+ +
Sbjct: 353 VPILLATDVASRGLDIPTVDLVINYDIPRDPRDYVHRVGRTARAG-RGGLAVSIITETDV 411
Query: 536 RF 537
+
Sbjct: 412 KL 413
>AT5G26742.3 | Symbols: emb1138 | DEAD box RNA helicase (RH3) |
chr5:9285540-9288618 REVERSE LENGTH=655
Length = 655
Score = 207 bits (528), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 128/328 (39%), Positives = 186/328 (56%), Gaps = 10/328 (3%)
Query: 215 LSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQP---ELQKEEG--PIGVICAPTRELAQQI 269
L GRDII AKTG+GKT AF +P+I + ++ + G P ++ APTRELA+Q+
Sbjct: 44 LQGRDIIARAKTGTGKTLAFGIPIIKRLTEEAGDYTAFRRSGRLPKFLVLAPTRELAKQV 103
Query: 270 YLESKKFAKSYGIRVSAVYGGMSKLEQFKELKAGCEIVVATPGRLIDMLKMKALTMTRAT 329
E K+ A + VYGG+S Q L G ++VV TPGR+ID+++ ++L +
Sbjct: 104 EKEIKESAPY--LSTVCVYGGVSYTIQQSALTRGVDVVVGTPGRIIDLIEGRSLKLGEVE 161
Query: 330 YLVLDEADRMFDLGFEPQVRSIVGQIRPDRQTSLFSATMPRKVEKLAREILSDPVRV-IV 388
YLVLDEAD+M +GFE V SI+ + RQ+ LFSATMP V+KLAR+ L +P+ + +V
Sbjct: 162 YLVLDEADQMLAVGFEEAVESILENLPTKRQSMLFSATMPTWVKKLARKYLDNPLNIDLV 221
Query: 389 GEVGMANEDITQVVQVVPSDSXXXXXXXXXXXXTIDQGDTLVFASKKATVDDIETQLSQR 448
G+ + ++ + + + G T+VF K D++ LS
Sbjct: 222 GDQDEKLAEGIKLYAIATTSTSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALSN- 280
Query: 449 GFKVAALHGDKDQASRMDILQKFKSGVYHVLIATDVAARGLDIKSIKTVVNFDIAKDMDM 508
ALHGD Q R L F+ G + VL+ATDVA+RGLDI ++ V+++++ D +
Sbjct: 281 SIATEALHGDISQHQRERTLNAFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPET 340
Query: 509 HVHRIGRTGRAGDKEGVAYTLITQKEAR 536
VHR GRTGRAG KEG A + T + R
Sbjct: 341 FVHRSGRTGRAG-KEGSAILMHTSSQKR 367
>AT3G13920.4 | Symbols: EIF4A1 | eukaryotic translation initiation
factor 4A1 | chr3:4592635-4594128 REVERSE LENGTH=407
Length = 407
Score = 207 bits (528), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 123/340 (36%), Positives = 192/340 (56%), Gaps = 9/340 (2%)
Query: 198 QGYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELQKEEGPIGV 257
+G+EKP++IQ + + G D+I A++G+GKTA F ++ +D +Q + +
Sbjct: 52 RGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFC-SGVLQQLDFSLIQCQ----AL 106
Query: 258 ICAPTRELAQQIYLESKKFAKSYGIRVSAVYGGMSKLEQFKELKAGCEIVVATPGRLIDM 317
+ APTRELAQQI + G++V A GG S E + L+AG +VV TPGR+ DM
Sbjct: 107 VLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDM 166
Query: 318 LKMKALTMTRATYLVLDEADRMFDLGFEPQVRSIVGQIRPDRQTSLFSATMPRKVEKLAR 377
LK ++L VLDEAD M GF+ Q+ I + P Q +FSATMP + ++ R
Sbjct: 167 LKRQSLRADNIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITR 226
Query: 378 EILSDPVRVIVGEVGMANEDITQV-VQVVPSDSXXXXXXXXXXXXTIDQGDTLVFASKKA 436
+ +S PVR++V + E I Q V V + I Q +++F + +
Sbjct: 227 KFMSKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQ--SVIFVNTRR 284
Query: 437 TVDDIETQLSQRGFKVAALHGDKDQASRMDILQKFKSGVYHVLIATDVAARGLDIKSIKT 496
VD + ++ R V+A HGD DQ +R I+++F+SG VLI TD+ ARG+D++ +
Sbjct: 285 KVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSL 344
Query: 497 VVNFDIAKDMDMHVHRIGRTGRAGDKEGVAYTLITQKEAR 536
V+NFD+ + ++HRIGR+GR G ++GVA +T+ + R
Sbjct: 345 VINFDLPTQPENYLHRIGRSGRFG-RKGVAINFVTRDDER 383
>AT1G54270.2 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-20262018
FORWARD LENGTH=407
Length = 407
Score = 207 bits (526), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 124/340 (36%), Positives = 191/340 (56%), Gaps = 9/340 (2%)
Query: 198 QGYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELQKEEGPIGV 257
+G+EKP++IQ + + G D+I A++G+GKTA F ++ +D LQ + +
Sbjct: 52 RGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFC-SGVLQQLDYALLQCQ----AL 106
Query: 258 ICAPTRELAQQIYLESKKFAKSYGIRVSAVYGGMSKLEQFKELKAGCEIVVATPGRLIDM 317
+ APTRELAQQI + G++V A GG S E + L+AG +VV TPGR+ DM
Sbjct: 107 VLAPTRELAQQIEKVMRALGDYQGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDM 166
Query: 318 LKMKALTMTRATYLVLDEADRMFDLGFEPQVRSIVGQIRPDRQTSLFSATMPRKVEKLAR 377
L+ ++L VLDEAD M GF+ Q+ I + P Q +FSATMP + ++ R
Sbjct: 167 LRRQSLRPDCIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITR 226
Query: 378 EILSDPVRVIVGEVGMANEDITQV-VQVVPSDSXXXXXXXXXXXXTIDQGDTLVFASKKA 436
+ +S PVR++V + E I Q V V D I Q +++F + +
Sbjct: 227 KFMSKPVRILVKRDELTLEGIKQFYVNVEKEDWKLETLCDLYETLAITQ--SVIFVNTRR 284
Query: 437 TVDDIETQLSQRGFKVAALHGDKDQASRMDILQKFKSGVYHVLIATDVAARGLDIKSIKT 496
VD + ++ R V+A HGD DQ +R I+++F+SG VLI TD+ ARG+D++ +
Sbjct: 285 KVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSL 344
Query: 497 VVNFDIAKDMDMHVHRIGRTGRAGDKEGVAYTLITQKEAR 536
V+NFD+ + ++HRIGR+GR G ++GVA +T + R
Sbjct: 345 VINFDLPTQPENYLHRIGRSGRFG-RKGVAINFVTLDDQR 383
>AT1G72730.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:27378040-27379593 REVERSE LENGTH=414
Length = 414
Score = 202 bits (513), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 122/363 (33%), Positives = 201/363 (55%), Gaps = 11/363 (3%)
Query: 181 TFEDCGFPPPVMSAIKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLPMIV 240
+F+ P ++ I G+EKP++IQ + + G D+I A++G+GKTA F ++
Sbjct: 42 SFDAMELQPDLLRGIYAYGFEKPSAIQQRGIIPFCKGLDVIQQAQSGTGKTATFC-SGVL 100
Query: 241 HIMDQPELQKEEGPIGVICAPTRELAQQIYLESKKFAKSYGIRVSAVYGGMSKLEQFKEL 300
+D +Q + ++ APTRELAQQI + G++ A GG S E + L
Sbjct: 101 QQLDISLVQCQ----ALVLAPTRELAQQIEKVMRALGDYLGVKAQACVGGTSVREDQRVL 156
Query: 301 KAGCEIVVATPGRLIDMLKMKALTMTRATYLVLDEADRMFDLGFEPQVRSIVGQIRPDR- 359
++G +VV TPGR+ D+L+ ++L VLDEAD M GF+ Q+ I Q+ P +
Sbjct: 157 QSGVHVVVGTPGRVFDLLRRQSLRADAIKMFVLDEADEMLSRGFKDQIYDIF-QLLPSKV 215
Query: 360 QTSLFSATMPRKVEKLAREILSDPVRVIVGEVGMANEDITQV-VQVVPSDSXXXXXXXXX 418
Q +FSATMP + ++ R+ ++ PVR++V + E I Q V V +
Sbjct: 216 QVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVDKEEWKLETLCDLY 275
Query: 419 XXXTIDQGDTLVFASKKATVDDIETQLSQRGFKVAALHGDKDQASRMDILQKFKSGVYHV 478
I Q +++F + + VD + ++ R V+A HGD DQ +R I+++F+SG V
Sbjct: 276 ETLAITQ--SVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRV 333
Query: 479 LIATDVAARGLDIKSIKTVVNFDIAKDMDMHVHRIGRTGRAGDKEGVAYTLITQKEARFA 538
LI TD+ ARG+D++ + V+NFD+ + ++HRIGR+GR G ++GVA +T ++ R
Sbjct: 334 LITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFG-RKGVAINFMTSEDERMM 392
Query: 539 GEL 541
++
Sbjct: 393 ADI 395
>AT4G00660.1 | Symbols: RH8, ATRH8 | RNAhelicase-like 8 |
chr4:274638-277438 FORWARD LENGTH=505
Length = 505
Score = 192 bits (487), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 117/377 (31%), Positives = 195/377 (51%), Gaps = 20/377 (5%)
Query: 182 FEDCGFPPPVMSAIKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLPMIVH 241
FED ++ I ++G+E+P+ IQ +++P+ L+GRDI+ AK G+GKTAAF +P++
Sbjct: 133 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGRDILARAKNGTGKTAAFCIPVLEK 192
Query: 242 I-MDQPELQKEEGPIGVICAPTRELAQQIYLESKKFAKSYGIRVSAVYGGMSKLEQFKEL 300
I D +Q VI PTRELA Q K+ K I+V GG S + L
Sbjct: 193 IDQDNNVIQ------AVIIVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRL 246
Query: 301 KAGCEIVVATPGRLIDMLKMKALTMTRATYLVLDEADRMFDLGFEPQVRSIVGQIRPDRQ 360
++V TPGR++D+ K + + LV+DEAD++ F+P V ++ + RQ
Sbjct: 247 YQPVHLLVGTPGRILDLTKKGVCVLKDCSVLVMDEADKLLSQEFQPSVEHLISFLPESRQ 306
Query: 361 TSLFSATMPRKVEKLAREILSDPVRV-IVGEVGMANEDITQVVQVVPSDSXXXXXXXXXX 419
+FSAT P V+ L++P + ++ E+ + + ITQ V
Sbjct: 307 ILMFSATFPVTVKDFKDRFLTNPYVINLMDELTL--KGITQFYAFVEERQKIHCLNTLFS 364
Query: 420 XXTIDQGDTLVFASKKATVDDIETQLSQRGFKVAALHGDKDQASRMDILQKFKSGVYHVL 479
I+Q +++F + V+ + ++++ G+ +H Q R + F++G L
Sbjct: 365 KLQINQ--SIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNL 422
Query: 480 IATDVAARGLDIKSIKTVVNFDIAKDMDMHVHRIGRTGRAGDKEGVAYTLITQKEARFAG 539
+ TD+ RG+DI+++ V+NFD K+ + ++HR+GR+GR G G+A LIT E RF
Sbjct: 423 VCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRFGHL-GLAVNLITY-EDRF-- 478
Query: 540 ELVNSLIAAGQNVSTEL 556
+L Q + TE+
Sbjct: 479 ----NLYRIEQELGTEI 491
>AT4G00660.2 | Symbols: RH8, ATRH8 | RNAhelicase-like 8 |
chr4:274638-277438 FORWARD LENGTH=505
Length = 505
Score = 192 bits (487), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 117/377 (31%), Positives = 195/377 (51%), Gaps = 20/377 (5%)
Query: 182 FEDCGFPPPVMSAIKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLPMIVH 241
FED ++ I ++G+E+P+ IQ +++P+ L+GRDI+ AK G+GKTAAF +P++
Sbjct: 133 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGRDILARAKNGTGKTAAFCIPVLEK 192
Query: 242 I-MDQPELQKEEGPIGVICAPTRELAQQIYLESKKFAKSYGIRVSAVYGGMSKLEQFKEL 300
I D +Q VI PTRELA Q K+ K I+V GG S + L
Sbjct: 193 IDQDNNVIQ------AVIIVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRL 246
Query: 301 KAGCEIVVATPGRLIDMLKMKALTMTRATYLVLDEADRMFDLGFEPQVRSIVGQIRPDRQ 360
++V TPGR++D+ K + + LV+DEAD++ F+P V ++ + RQ
Sbjct: 247 YQPVHLLVGTPGRILDLTKKGVCVLKDCSVLVMDEADKLLSQEFQPSVEHLISFLPESRQ 306
Query: 361 TSLFSATMPRKVEKLAREILSDPVRV-IVGEVGMANEDITQVVQVVPSDSXXXXXXXXXX 419
+FSAT P V+ L++P + ++ E+ + + ITQ V
Sbjct: 307 ILMFSATFPVTVKDFKDRFLTNPYVINLMDELTL--KGITQFYAFVEERQKIHCLNTLFS 364
Query: 420 XXTIDQGDTLVFASKKATVDDIETQLSQRGFKVAALHGDKDQASRMDILQKFKSGVYHVL 479
I+Q +++F + V+ + ++++ G+ +H Q R + F++G L
Sbjct: 365 KLQINQ--SIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNL 422
Query: 480 IATDVAARGLDIKSIKTVVNFDIAKDMDMHVHRIGRTGRAGDKEGVAYTLITQKEARFAG 539
+ TD+ RG+DI+++ V+NFD K+ + ++HR+GR+GR G G+A LIT E RF
Sbjct: 423 VCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRFGHL-GLAVNLITY-EDRF-- 478
Query: 540 ELVNSLIAAGQNVSTEL 556
+L Q + TE+
Sbjct: 479 ----NLYRIEQELGTEI 491
>AT5G62190.1 | Symbols: PRH75 | DEAD box RNA helicase (PRH75) |
chr5:24980542-24983879 REVERSE LENGTH=671
Length = 671
Score = 186 bits (472), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 122/371 (32%), Positives = 191/371 (51%), Gaps = 17/371 (4%)
Query: 174 DVPKPVKTFEDCGFPPPVMSAIKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAA 233
D P V F P+ +K G E IQ +VL G D++G A+TG GKT A
Sbjct: 93 DNPNAVSKFR---ISAPLREKLKANGIEALFPIQASTFDMVLDGADLVGRARTGQGKTLA 149
Query: 234 FVLPMIVHIMDQPELQKEE-----GPIGVICAPTRELAQQIYLESKKFAKSYGIRVSAVY 288
FVLP++ +++ P K + P ++ PTRELA+Q+ + + S G+ +Y
Sbjct: 150 FVLPILESLVNGPAKSKRKMGYGRSPSVLVLLPTRELAKQVAADFDAYGGSLGLSSCCLY 209
Query: 289 GGMSKLEQFKELKAGCEIVVATPGRLIDMLKMKALTMTRATYLVLDEADRMFDLGFEPQV 348
GG S Q +LK G +IVV TPGR+ D ++ + L + + VLDEAD M +GF V
Sbjct: 210 GGDSYPVQEGKLKRGVDIVVGTPGRIKDHIERQNLDFSYLQFRVLDEADEMLRMGFVEDV 269
Query: 349 RSIVGQIRPDR--QTSLFSATMPRKVEKLAREILSDPVRVI--VGEVGMANEDITQVVQV 404
I+G++ QT LFSAT+P V+ ++ L + I VG M + + + +
Sbjct: 270 ELILGKVEDSTKVQTLLFSATLPSWVKNISNRFLKRDQKTIDLVGNDKMKASNSVRHIAI 329
Query: 405 VPSDSXXXXXXXXXXXXTIDQGDTLVFASKKATVDDIETQLSQRGFKVAALHGDKDQASR 464
+ + G T++FA K V ++ L ALHG+ Q+ R
Sbjct: 330 PCNKAAMARLIPDIISCYSSGGQTIIFAETKVQVSELSGLLDGS----RALHGEIPQSQR 385
Query: 465 MDILQKFKSGVYHVLIATDVAARGLDIKSIKTVVNFDIAKDMDMHVHRIGRTGRAGDKEG 524
L F++G + L+AT+VAARGLDI ++ ++ + ++++ ++HR GRTGRAG+ G
Sbjct: 386 EVTLAGFRNGKFATLVATNVAARGLDINDVQLIIQCEPPREVEAYIHRSGRTGRAGNT-G 444
Query: 525 VAYTLITQKEA 535
VA TL +++
Sbjct: 445 VAVTLYDSRKS 455
>AT5G65900.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr5:26358328-26361244 FORWARD LENGTH=633
Length = 633
Score = 186 bits (471), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 121/361 (33%), Positives = 184/361 (50%), Gaps = 5/361 (1%)
Query: 180 KTFEDCGFPPPVMSAIKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLPMI 239
KTFE +IK+ G+ + T IQ +A+P ++ G D++G A+TGSGKT AF++P
Sbjct: 154 KTFESLSLSDNTYKSIKEMGFARMTQIQAKAIPPLMMGEDVLGAARTGSGKTLAFLIPA- 212
Query: 240 VHIMDQPELQKEEGPIGVICAPTRELAQQIYLESKKFAKSYGIRVSAVYGGMSKLEQFKE 299
V ++ + + G ++ PTRELA Q Y +K+ K + V V GG + + +
Sbjct: 213 VELLYRVKFTPRNGTGVLVICPTRELAIQSYGVAKELLKYHSQTVGKVIGGEKRKTEAEI 272
Query: 300 LKAGCEIVVATPGRLIDMLK-MKALTMTRATYLVLDEADRMFDLGFEPQVRSIVGQIRPD 358
L G ++VATPGRL+D L+ +LV+DEADR+ + FE ++ I+ +
Sbjct: 273 LAKGVNLLVATPGRLLDHLENTNGFIFKNLKFLVMDEADRILEQNFEEDLKKILNLLPKT 332
Query: 359 RQTSLFSATMPRKVEKLAREILSDPVRVIV--GEVGMANEDITQVVQVVPSDSXXXXXXX 416
RQTSLFSAT KVE LAR L+ PV + V G + NE + Q VVPS
Sbjct: 333 RQTSLFSATQSAKVEDLARVSLTSPVYIDVDEGRKEVTNEGLEQGYCVVPSAMRLLFLLT 392
Query: 417 XXXXXTIDQGDTLVFASKKATVDDIETQLSQRGFKVAALHGDKDQASRMDILQKFKSGVY 476
+ + F++ K+T E F + G DQ R +F
Sbjct: 393 FLKRFQGKKKIMVFFSTCKSTKFHAEL-FRYIKFDCLEIRGGIDQNKRTPTFLQFIKAET 451
Query: 477 HVLIATDVAARGLDIKSIKTVVNFDIAKDMDMHVHRIGRTGRAGDKEGVAYTLITQKEAR 536
+L+ T+VAARGLD + +V +D + ++HR+GRT R +G A ++T +E +
Sbjct: 452 GILLCTNVAARGLDFPHVDWIVQYDPPDNPTDYIHRVGRTARGEGAKGKALLVLTPQELK 511
Query: 537 F 537
F
Sbjct: 512 F 512
>AT5G08610.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:2790341-2794059
FORWARD LENGTH=850
Length = 850
Score = 182 bits (461), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 122/370 (32%), Positives = 186/370 (50%), Gaps = 16/370 (4%)
Query: 182 FEDCGFPPPVMSAIKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLPMIVH 241
F+ P + AIK G+E T +Q LP++L G+D++ AKTG+GKT AF+LP I
Sbjct: 384 FDQFPLSPLSLKAIKDAGFETMTVVQEATLPIILQGKDVLAKAKTGTGKTVAFLLPAIEA 443
Query: 242 IMDQPELQKE--EGPIGV-ICAPTRELAQQIYLESKKFAKSY-GIRVSAVYGGMSKL--E 295
++ P ++ + PI V + PTRELA Q E+ K + I V V GG +KL E
Sbjct: 444 VIKSPPASRDSRQPPIIVLVVCPTRELASQAAAEANTLLKYHPSIGVQVVIGG-TKLPTE 502
Query: 296 QFKELKAGCEIVVATPGRLIDMLKMKALTMTR---ATYLVLDEADRMFDLGFEPQVRSIV 352
Q + C+I+VATPGRL D ++ + TR LVLDEAD + D+GF + I+
Sbjct: 503 QRRMQTNPCQILVATPGRLKDHIENTSGFATRLMGVKVLVLDEADHLLDMGFRRDIERII 562
Query: 353 GQIRPDRQTSLFSATMPRKVEKLAREILS---DPVRVIVGEVGMANEDITQVVQVVPSDS 409
+ RQT LFSAT+P +V ++ L + + + G ++ +TQ+ + D
Sbjct: 563 AAVPKQRQTFLFSATVPEEVRQICHVALKRDHEFINCVQEGSGETHQKVTQMYMIASLDR 622
Query: 410 XXXXXXXXXXXXTIDQGD--TLVFASKKATVDDIETQLSQRGFKVAALHGDKDQASRMDI 467
D D ++F + + LSQ V +H K Q+ R +
Sbjct: 623 HFSLLHVLLKEHIADNVDYKVIIFCTTAMVTRLVADLLSQLSLNVREIHSRKPQSYRTRV 682
Query: 468 LQKFKSGVYHVLIATDVAARGLDIKSIKTVVNFDIAKDMDMHVHRIGRTGRAGDKEGVAY 527
+F+ +L+ +DV+ARG+D + VV + D + ++HR+GRTGR G KEG
Sbjct: 683 SDEFRKSKAIILVTSDVSARGVDYPDVSLVVQMGLPSDREQYIHRLGRTGRKG-KEGEGV 741
Query: 528 TLITQKEARF 537
L+ E F
Sbjct: 742 LLLAPWEEYF 751
>AT3G18600.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:6399724-6403007
REVERSE LENGTH=568
Length = 568
Score = 181 bits (459), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 120/360 (33%), Positives = 182/360 (50%), Gaps = 6/360 (1%)
Query: 181 TFEDCGFPPPVMSAIKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLPMIV 240
TF+ AIK+ G++ T IQ ++ +L G+D++G A+TGSGKT AF++P V
Sbjct: 90 TFDSLDLSEQTSIAIKEMGFQYMTQIQAGSIQPLLEGKDVLGAARTGSGKTLAFLIPA-V 148
Query: 241 HIMDQPELQKEEGPIGVICAPTRELAQQIYLESKKFAKSYGIRVSAVYGGMSKLEQFKEL 300
++ + G ++ PTRELA Q +++ K + VS V GG ++ + + +
Sbjct: 149 ELLFKERFSPRNGTGVIVICPTRELAIQTKNVAEELLKHHSQTVSMVIGGNNRRSEAQRI 208
Query: 301 KAGCEIVVATPGRLIDMLK-MKALTMTRATYLVLDEADRMFDLGFEPQVRSIVGQIRPDR 359
+G +V+ATPGRL+D L+ KA LV+DEADR+ + FE + I+ + R
Sbjct: 209 ASGSNLVIATPGRLLDHLQNTKAFIYKHLKCLVIDEADRILEENFEEDMNKILKILPKTR 268
Query: 360 QTSLFSATMPRKVEKLAREILSDPVRVIV--GEVGMANEDITQVVQVVPSDSXXXXXXXX 417
QT+LFSAT KV+ LAR L+ PV V V G + NE + Q VVPS
Sbjct: 269 QTALFSATQTSKVKDLARVSLTSPVHVDVDDGRRKVTNEGLEQGYCVVPSKQRLILLISF 328
Query: 418 XXXXTIDQGDTLVFASKKATVDDIETQLSQRGFKVAALHGDKDQASRMDILQKFKSGVYH 477
+VF S +V + V+ +HG DQ R F
Sbjct: 329 LKKNL--NKKIMVFFSTCKSVQFHTEIMKISDVDVSDIHGGMDQNRRTKTFFDFMKAKKG 386
Query: 478 VLIATDVAARGLDIKSIKTVVNFDIAKDMDMHVHRIGRTGRAGDKEGVAYTLITQKEARF 537
+L+ TDVAARGLDI S+ ++ +D ++HR+GRT R +G A ++ +E +F
Sbjct: 387 ILLCTDVAARGLDIPSVDWIIQYDPPDKPTEYIHRVGRTARGEGAKGKALLVLIPEELQF 446
>AT2G45810.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr2:18859836-18862318 FORWARD LENGTH=528
Length = 528
Score = 179 bits (453), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 107/357 (29%), Positives = 181/357 (50%), Gaps = 12/357 (3%)
Query: 182 FEDCGFPPPVMSAIKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLPMIVH 241
FED ++ I ++G+EKP+ IQ +++P+ L+G DI+ AK G+GKT AF +P +
Sbjct: 156 FEDYFLKRDLLRGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTGAFCIPTLEK 215
Query: 242 IMDQPELQKEEGPIGVICAPTRELAQQIYLESKKFAKSYGIRVSAVYGGMSKLEQFKELK 301
I PE + VI PTRELA Q K+ +K I V GG S + L
Sbjct: 216 I--DPENNVIQA---VILVPTRELALQTSQVCKELSKYLKIEVMVTTGGTSLRDDIMRLY 270
Query: 302 AGCEIVVATPGRLIDMLKMKALTMTRATYLVLDEADRMFDLGFEPQVRSIVGQIRPDRQT 361
++V TPGR++D+ K + LV+DEAD++ + F+P + ++ + RQ
Sbjct: 271 QPVHLLVGTPGRILDLAKKGVCVLKDCAMLVMDEADKLLSVEFQPSIEELIQFLPESRQI 330
Query: 362 SLFSATMPRKVEKLAREILSDPVRV-IVGEVGMANEDITQVVQVVPSDSXXXXXXXXXXX 420
+FSAT P V+ L P + ++ ++ + +TQ V
Sbjct: 331 LMFSATFPVTVKSFKDRYLKKPYIINLMDQLTLMG--VTQYYAFVEERQKVHCLNTLFSK 388
Query: 421 XTIDQGDTLVFASKKATVDDIETQLSQRGFKVAALHGDKDQASRMDILQKFKSGVYHVLI 480
I+Q +++F + V+ + ++++ G+ +H Q R + F++G L+
Sbjct: 389 LQINQ--SIIFCNSVNRVELLAKKITELGYSCFYIHAKMVQDHRNRVFHDFRNGACRNLV 446
Query: 481 ATDVAARGLDIKSIKTVVNFDIAKDMDMHVHRIGRTGRAGDKEGVAYTLITQKEARF 537
TD+ RG+DI+++ V+NFD + + ++HR+GR+GR G G+A L+T E RF
Sbjct: 447 CTDLFTRGIDIQAVNVVINFDFPRTSESYLHRVGRSGRFGHL-GLAVNLVTY-EDRF 501
>AT3G61240.2 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:22666590-22669154 FORWARD LENGTH=498
Length = 498
Score = 178 bits (451), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 104/357 (29%), Positives = 183/357 (51%), Gaps = 12/357 (3%)
Query: 182 FEDCGFPPPVMSAIKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLPMIVH 241
FED ++ I ++G+EKP+ IQ +++P+ L+G DI+ AK G+GKT AF +P++
Sbjct: 126 FEDYFLKRDLLKGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTGAFCIPVLEK 185
Query: 242 IMDQPELQKEEGPIGVICAPTRELAQQIYLESKKFAKSYGIRVSAVYGGMSKLEQFKELK 301
I + + +I PTRELA Q K+ +K I+V GG S + L
Sbjct: 186 IDPNNNVIQ-----AMILVPTRELALQTSQVCKELSKYLNIQVMVTTGGTSLRDDIMRLH 240
Query: 302 AGCEIVVATPGRLIDMLKMKALTMTRATYLVLDEADRMFDLGFEPQVRSIVGQIRPDRQT 361
++V TPGR++D+ K + LV+DEAD++ F+P + ++ + +RQ
Sbjct: 241 QPVHLLVGTPGRILDLTKKGVCVLKDCAMLVMDEADKLLSAEFQPSLEELIQFLPQNRQF 300
Query: 362 SLFSATMPRKVEKLAREILSDPVRV-IVGEVGMANEDITQVVQVVPSDSXXXXXXXXXXX 420
+FSAT P V+ L P + ++ ++ + +TQ V
Sbjct: 301 LMFSATFPVTVKAFKDRHLRKPYVINLMDQLTLMG--VTQYYAFVEERQKVHCLNTLFSK 358
Query: 421 XTIDQGDTLVFASKKATVDDIETQLSQRGFKVAALHGDKDQASRMDILQKFKSGVYHVLI 480
I+Q +++F + V+ + ++++ G+ +H Q R + +F++G L+
Sbjct: 359 LQINQ--SIIFCNSVNRVELLAKKITELGYSCFYIHAKMVQDHRNRVFHEFRNGACRNLV 416
Query: 481 ATDVAARGLDIKSIKTVVNFDIAKDMDMHVHRIGRTGRAGDKEGVAYTLITQKEARF 537
TD+ RG+DI+++ V+NFD + + ++HR+GR+GR G G+A L+T E RF
Sbjct: 417 CTDLFTRGIDIQAVNVVINFDFPRTSESYLHRVGRSGRFGHL-GLAVNLVTY-EDRF 471
>AT3G61240.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:22666590-22669154 FORWARD LENGTH=498
Length = 498
Score = 178 bits (451), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 104/357 (29%), Positives = 183/357 (51%), Gaps = 12/357 (3%)
Query: 182 FEDCGFPPPVMSAIKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLPMIVH 241
FED ++ I ++G+EKP+ IQ +++P+ L+G DI+ AK G+GKT AF +P++
Sbjct: 126 FEDYFLKRDLLKGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTGAFCIPVLEK 185
Query: 242 IMDQPELQKEEGPIGVICAPTRELAQQIYLESKKFAKSYGIRVSAVYGGMSKLEQFKELK 301
I + + +I PTRELA Q K+ +K I+V GG S + L
Sbjct: 186 IDPNNNVIQ-----AMILVPTRELALQTSQVCKELSKYLNIQVMVTTGGTSLRDDIMRLH 240
Query: 302 AGCEIVVATPGRLIDMLKMKALTMTRATYLVLDEADRMFDLGFEPQVRSIVGQIRPDRQT 361
++V TPGR++D+ K + LV+DEAD++ F+P + ++ + +RQ
Sbjct: 241 QPVHLLVGTPGRILDLTKKGVCVLKDCAMLVMDEADKLLSAEFQPSLEELIQFLPQNRQF 300
Query: 362 SLFSATMPRKVEKLAREILSDPVRV-IVGEVGMANEDITQVVQVVPSDSXXXXXXXXXXX 420
+FSAT P V+ L P + ++ ++ + +TQ V
Sbjct: 301 LMFSATFPVTVKAFKDRHLRKPYVINLMDQLTLMG--VTQYYAFVEERQKVHCLNTLFSK 358
Query: 421 XTIDQGDTLVFASKKATVDDIETQLSQRGFKVAALHGDKDQASRMDILQKFKSGVYHVLI 480
I+Q +++F + V+ + ++++ G+ +H Q R + +F++G L+
Sbjct: 359 LQINQ--SIIFCNSVNRVELLAKKITELGYSCFYIHAKMVQDHRNRVFHEFRNGACRNLV 416
Query: 481 ATDVAARGLDIKSIKTVVNFDIAKDMDMHVHRIGRTGRAGDKEGVAYTLITQKEARF 537
TD+ RG+DI+++ V+NFD + + ++HR+GR+GR G G+A L+T E RF
Sbjct: 417 CTDLFTRGIDIQAVNVVINFDFPRTSESYLHRVGRSGRFGHL-GLAVNLVTY-EDRF 471
>AT5G63630.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:25472598-25476402
REVERSE LENGTH=788
Length = 788
Score = 175 bits (443), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 118/373 (31%), Positives = 180/373 (48%), Gaps = 14/373 (3%)
Query: 182 FEDCGFPPPVMSAIKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLPMIVH 241
F+ P + AIK GYE T +Q LP++L G+D++ AKTG+GKT AF+LP I
Sbjct: 322 FDHYPLSPLSLKAIKDAGYETMTVVQEATLPIILKGKDVLAKAKTGTGKTVAFLLPSIEV 381
Query: 242 IMDQPEL---QKEEGPIGVICAPTRELAQQIYLESKKFAKSY-GIRVSAVYGGMS-KLEQ 296
++ P K + ++ PTRELA Q E+ K + I V V GG LEQ
Sbjct: 382 VVKSPPTSPDNKRPPILALVICPTRELANQAATEANTLLKYHPSIGVQVVIGGTRLGLEQ 441
Query: 297 FKELKAGCEIVVATPGRLIDMLKMKALTMTR---ATYLVLDEADRMFDLGFEPQVRSIVG 353
+ C+I+VATPGRL D ++ TR LVLDEAD + D+GF + I+
Sbjct: 442 KRMQTNPCQILVATPGRLKDHIENTPGFATRLKGVKVLVLDEADHLLDMGFRKDIERIIS 501
Query: 354 QIRPDRQTSLFSATMPRKVEKLAREIL---SDPVRVIVGEVGMANEDITQVVQVVPSDSX 410
+ +RQT LFSAT+P +V ++ L + V + ++ + Q+ + D
Sbjct: 502 AVPKERQTFLFSATVPEEVRQICLVALRRDHEFVNCVHEGTIETHQQVRQMHMIASLDRH 561
Query: 411 XXXXXXXXXXXTIDQGD--TLVFASKKATVDDIETQLSQRGFKVAALHGDKDQASRMDIL 468
+ D +VF + + L + V +H K Q+ R +
Sbjct: 562 FSLLYTLLREHIMGNVDYKVIVFCTTAMVTKLVADLLGELNLNVREIHSRKPQSYRTRVS 621
Query: 469 QKFKSGVYHVLIATDVAARGLDIKSIKTVVNFDIAKDMDMHVHRIGRTGRAGDKEGVAYT 528
+F+ +L+ +DV+ARG+D + V+ + KD + ++HR+GRTGR G KEG
Sbjct: 622 NEFRKSKGLILVTSDVSARGVDYPDVTLVLQVGLPKDREQYIHRLGRTGRKG-KEGEGIL 680
Query: 529 LITQKEARFAGEL 541
L+ E F L
Sbjct: 681 LLAPWEEYFLSSL 693
>AT4G34910.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr4:16631661-16634834
FORWARD LENGTH=626
Length = 626
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 122/388 (31%), Positives = 187/388 (48%), Gaps = 51/388 (13%)
Query: 180 KTFEDCGFPPPVMSAIKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLPMI 239
K+FE+ G ++ A+ K+G EKPT IQ A+P +L G+D++ AKTGSGKT A++LP++
Sbjct: 46 KSFEELGLDSRLIRALTKKGIEKPTLIQQSAIPYILEGKDVVARAKTGSGKTLAYLLPLL 105
Query: 240 VHIMDQPELQKEE-GPIGVICAPTRELAQQIYLESKKFAKSYGIRVSAVY--GGMSKLEQ 296
+ + K++ P I P+REL QQ+Y E + +++ AV MS +
Sbjct: 106 QKLFSADSVSKKKLAPSAFILVPSRELCQQVYTEVSSLIELCRVQLKAVQLTSSMSASDM 165
Query: 297 FKELKAGCEIVVATPGRLIDMLKMKALTMTRA----TYLVLDEADRMFDLGFEPQVRSIV 352
L EI+V+TP + L T + LVLDEAD + G+E +RS+
Sbjct: 166 RNALAGLPEILVSTPACIPKCFAAGVLEPTAVSESLSILVLDEADLLLSYGYEDNLRSVT 225
Query: 353 GQIRPDRQTSLFSATMPRKVEKLAREILSDPVRVIVGEVGMANEDITQVVQ---VVPSDS 409
I Q L SAT VEKL + IL +P+ + + E E + VQ + S
Sbjct: 226 SIIPRRCQCLLMSATTSSDVEKLKKLILHNPIVLTLTEDNDKEEAVPSNVQQFWISCSAQ 285
Query: 410 XXXXXXXXXXXXTIDQGDTLVFASKKATVD---DIETQLSQRGFKVAALHGDKDQASRMD 466
+ Q L+F + T+D ++ L + G K A L+G+ Q SR+
Sbjct: 286 DKLLHILALLKLEVVQKKILIFIN---TIDMGFRLKLFLEKFGIKSAILNGELPQNSRLH 342
Query: 467 ILQKFKSGVYHVLIATDVAA-----------------------------------RGLDI 491
IL++F +G++ LIATD + RG+D
Sbjct: 343 ILEQFNAGLFDYLIATDDNSQTKKQKEEAKGEANKENKKNNKRSKPKLDAEFGVVRGIDF 402
Query: 492 KSIKTVVNFDIAKDMDMHVHRIGRTGRA 519
K + TV+NFD+ + + ++HRIGRTGRA
Sbjct: 403 KKVHTVINFDMPQSVTGYIHRIGRTGRA 430
>AT2G07750.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr2:3576483-3580396 FORWARD LENGTH=845
Length = 845
Score = 170 bits (431), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 121/377 (32%), Positives = 190/377 (50%), Gaps = 17/377 (4%)
Query: 180 KTFEDCGFPPPVMSAIKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLPMI 239
K F++ P + A+ G K T +Q L L G+D + AKTG+GK+ AF+LP I
Sbjct: 375 KRFDESCISPLTLKALSASGIVKMTRVQDATLSECLDGKDALVKAKTGTGKSMAFLLPAI 434
Query: 240 ---VHIMDQPELQKEEGPIGV-ICAPTRELAQQIYLESKKFAKSY-GIRVSAVYGGMS-K 293
+ M+ + + PI V I PTRELA QI E K K++ GI V + GG +
Sbjct: 435 ETVLKAMNSGKGVHKVAPIFVLILCPTRELASQIAAEGKALLKNHDGIGVQTLIGGTRFR 494
Query: 294 LEQFKELKAGCEIVVATPGRLIDMLKMKALTMTRATYL---VLDEADRMFDLGFEPQVRS 350
L+Q + C+I++ATPGRL+D ++ K+ +R L ++DEAD + DLGF+ V
Sbjct: 495 LDQQRLESEPCQILIATPGRLLDHIENKSGLTSRLMALKLFIVDEADLLLDLGFKRDVEK 554
Query: 351 IVGQIRPDRQTSLFSATMPRKVEKLAREILSDPVRVIVGEVGMA----NEDITQVVQVVP 406
I+ + RQ+ LFSAT+P++V ++++ +L + +G+ ++ + Q V P
Sbjct: 555 IIDCLPRQRQSLLFSATIPKEVRRVSQLVLKRD-HSYIDTIGLGCVETHDKVKQSCIVAP 613
Query: 407 SDSXXXXXXXXXXXXTIDQGD--TLVFASKKATVDDIETQLSQRGFKVAALHGDKDQASR 464
+S + D +VF S + T L + V +H K Q R
Sbjct: 614 HESHFHLVPHLLKEHINNMPDYKIIVFCSTGMVTSLMYTLLREMKLNVREIHARKPQLHR 673
Query: 465 MDILQKFKSGVYHVLIATDVAARGLDIKSIKTVVNFDIAKDMDMHVHRIGRTGRAGDKEG 524
+ +FK +L+ +DV+ARG++ + V+ I D + ++HR+GRTGR G K G
Sbjct: 674 TCVSDEFKESNRLILVTSDVSARGMNYPDVTLVIQVGIPSDREQYIHRLGRTGREG-KGG 732
Query: 525 VAYTLITQKEARFAGEL 541
LI E F EL
Sbjct: 733 KGLLLIAPWERYFLDEL 749
>AT1G71370.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:26897235-26899381 REVERSE LENGTH=558
Length = 558
Score = 170 bits (430), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 118/360 (32%), Positives = 179/360 (49%), Gaps = 19/360 (5%)
Query: 191 VMSAIKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELQ- 249
++ A+ + G+E T +Q + +P + S +D++ A TGSGKT AF+LP I I
Sbjct: 27 IIEALDRSGFEVCTPVQAETIPFLCSHKDVVVDAATGSGKTLAFLLPFIEIIRRSNSYPP 86
Query: 250 KEEGPIGVICAPTRELAQQIYLESKKFAKSY-GIRVSAVYGG------MSKLEQFKELKA 302
K +GVI +PTREL+ QI+ ++ F + + + GG M+ LE+
Sbjct: 87 KPHQVMGVIISPTRELSAQIHKVAEPFVSTLPNVNSVLLVGGREVEADMNTLEE-----E 141
Query: 303 GCEIVVATPGRLIDMLK-MKALTMTRATYLVLDEADRMFDLGFEPQVRSIVGQIRPDRQT 361
G +++ TPGRL DM+K M+ L L+LDEADR+ D+GF+ QV I+ ++ R+T
Sbjct: 142 GANLLIGTPGRLSDMMKRMEFLDFRNLEILILDEADRLLDMGFQKQVNYIISRLPKQRRT 201
Query: 362 SLFSATMPRKVEKLAREILSDPVRVIVGEVGMANEDITQVVQVVPSDSXXXXXXXXXXXX 421
LFSAT + V LA+ L + + VI G + + + ++
Sbjct: 202 GLFSATQTQAVADLAKAGLRNAMEVISGAESKSKTSSGLYCEYLKCEADQKSSQLVHLLI 261
Query: 422 TIDQGDTLVFASKKATVDDIETQLSQ----RGFKVAALHGDKDQASRMDILQKFKSGVYH 477
+VF A VD LS+ + + HG DQ R L F
Sbjct: 262 ENKNKKLVVFFMTCACVDYWGLVLSKIPTLKSISFFSTHGKMDQKGRDTALASFTEASSG 321
Query: 478 VLIATDVAARGLDIKSIKTVVNFDIAKDMDMHVHRIGRTGRAGDKEGVAYTLITQKEARF 537
VL+ TDVAARGLDI I VV +D +D D+ +HR+GRT R +++G A + KE +
Sbjct: 322 VLLCTDVAARGLDIPGIDYVVQYDPPQDPDVFIHRVGRTARM-ERQGRAIVFLMPKETDY 380
>AT1G63250.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:23463284-23466451 REVERSE LENGTH=798
Length = 798
Score = 170 bits (430), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 121/377 (32%), Positives = 188/377 (49%), Gaps = 17/377 (4%)
Query: 180 KTFEDCGFPPPVMSAIKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLPMI 239
K F++ P + A+ G K T +Q L L G+D + AKTG+GK+ AF+LP I
Sbjct: 328 KRFDESCISPLTLKALSASGILKMTRVQDATLSECLDGKDALVKAKTGTGKSMAFLLPAI 387
Query: 240 ---VHIMDQPELQKEEGPI-GVICAPTRELAQQIYLESKKFAKSY-GIRVSAVYGGMS-K 293
+ M+ + + PI +I PTRELA QI E K K + GI V + GG K
Sbjct: 388 ETVLKAMNSGKGVNKVAPIFALILCPTRELASQIAAEGKALLKFHDGIGVQTLIGGTRFK 447
Query: 294 LEQFKELKAGCEIVVATPGRLIDMLKMKALTMTRATYL---VLDEADRMFDLGFEPQVRS 350
L+Q + C+I++ATPGRL+D ++ K+ +R L ++DEAD + DLGF V
Sbjct: 448 LDQQRLESEPCQILIATPGRLLDHIENKSGLTSRLMALKLFIVDEADLLLDLGFRRDVEK 507
Query: 351 IVGQIRPDRQTSLFSATMPRKVEKLAREILSDPVRVIVGEVGMA----NEDITQVVQVVP 406
I+ + RQ+ LFSAT+P++V ++++ +L + +G+ ++ + Q V P
Sbjct: 508 IIDCLPRQRQSLLFSATIPKEVRRVSQLVLKRD-HSYIDTIGLGCVETHDKVRQSCIVAP 566
Query: 407 SDSXXXXXXXXXXXXTIDQGD--TLVFASKKATVDDIETQLSQRGFKVAALHGDKDQASR 464
+S + D +VF S + T L + V +H K Q R
Sbjct: 567 HESHFHLVPHLLKEHINNTPDYKIIVFCSTGMVTSLMYTLLREMKLNVREIHARKPQLHR 626
Query: 465 MDILQKFKSGVYHVLIATDVAARGLDIKSIKTVVNFDIAKDMDMHVHRIGRTGRAGDKEG 524
+ +FK +L+ +DV+ARG++ + V+ I D + ++HR+GRTGR G K G
Sbjct: 627 TRVSDEFKESNRLILVTSDVSARGMNYPDVTLVIQVGIPSDREQYIHRLGRTGREG-KGG 685
Query: 525 VAYTLITQKEARFAGEL 541
LI E F EL
Sbjct: 686 EGLLLIAPWERYFLDEL 702
>AT5G08620.1 | Symbols: STRS2, ATRH25 | DEA(D/H)-box RNA helicase
family protein | chr5:2794540-2797548 FORWARD LENGTH=563
Length = 563
Score = 167 bits (424), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 117/370 (31%), Positives = 183/370 (49%), Gaps = 16/370 (4%)
Query: 182 FEDCGFPPPVMSAIKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLPMIVH 241
F+ P + I+ G++ T +Q LP++L G+DI+ AKTG+GKT AF+LP I
Sbjct: 82 FDQFPLSPLTLKGIEDAGFKTMTVVQEATLPLILQGKDILAKAKTGTGKTVAFLLPSIEA 141
Query: 242 IMDQPELQKE--EGPIGV-ICAPTRELAQQIYLESKKFAKSY-GIRVSAVYGGMSKL--E 295
++ P ++ PI V + PTRELA Q E+ K + I V V GG +KL E
Sbjct: 142 VIKAPPASRDNRHPPIIVLVVCPTRELACQAAAEANILLKYHPSIGVQVVIGG-TKLPTE 200
Query: 296 QFKELKAGCEIVVATPGRLIDMLKMKALTMTR---ATYLVLDEADRMFDLGFEPQVRSIV 352
Q + K+ C+I+VATPGRL D + + TR LVLDEAD + D+GF ++ I+
Sbjct: 201 QRRLQKSPCQILVATPGRLKDHIDNTSGFATRLMGVKVLVLDEADHLLDMGFRREIERII 260
Query: 353 GQIRPDRQTSLFSATMPRKVEKLAREILS---DPVRVIVGEVGMANEDITQVVQVVPSDS 409
+ RQT LFSAT+ +V ++ L + V + G ++ ++Q+ + D
Sbjct: 261 AAVPKQRQTFLFSATVSDEVRQICHVALKRDHEFVNCVQEGAGETHQKVSQMYMIASLDR 320
Query: 410 XXXXXXXXXXXXTIDQ--GDTLVFASKKATVDDIETQLSQRGFKVAALHGDKDQASRMDI 467
D ++F + + L + V +H K Q+ R +
Sbjct: 321 HFSLLYGLLKKHITDNVGYKVIIFCTTAMVTRLVADLLGKLSLNVREIHSRKPQSYRTRV 380
Query: 468 LQKFKSGVYHVLIATDVAARGLDIKSIKTVVNFDIAKDMDMHVHRIGRTGRAGDKEGVAY 527
+F+ +L+ +DV+ARG+D + VV + D + ++HR+GRTGR G KEG
Sbjct: 381 SDEFRKSKSIILVTSDVSARGVDYPDVSLVVQMGLPSDREQYIHRLGRTGRKG-KEGEGV 439
Query: 528 TLITQKEARF 537
L+ E F
Sbjct: 440 LLLAPWEEYF 449
>AT3G02065.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:359628-360734
FORWARD LENGTH=368
Length = 368
Score = 167 bits (424), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 105/356 (29%), Positives = 180/356 (50%), Gaps = 8/356 (2%)
Query: 209 QALPVVLSGRDIIGIAKTGSGKTAAFVLPMI----VHIMDQPELQKEEGPIGVICAPTRE 264
QA+P L+G+ ++ A TGSGKTA+F++P+I + + P Q+ P+ ++ APTRE
Sbjct: 2 QAIPAALTGKSLLASADTGSGKTASFLVPIISRCTTYHSEHPSDQRRN-PLAMVLAPTRE 60
Query: 265 LAQQIYLESKKFAKSYGIRVSAVYGGMSKLEQFKELKAGCEIVVATPGRLIDMLKMKALT 324
L Q+ ++K K + + V GG Q ++ G E+++ TPGR++D+L +
Sbjct: 61 LCVQVEDQAKMLGKGLPFKTALVVGGDPMSGQLYRIQQGVELIIGTPGRVVDLLSKHTIE 120
Query: 325 MTRATYLVLDEADRMFDLGFEPQVRSIVGQIRPDRQTSLFSATMPRKVEKLAREILSDPV 384
+ VLDE D M GF QV I Q Q LFSAT+ R+VEK+ + + +
Sbjct: 121 LDNIMTFVLDEVDCMLQRGFRDQVMQIF-QALSQPQVLLFSATISREVEKVGGSLAKEII 179
Query: 385 RVIVGEVGMANEDITQVVQVVPSDSXXXXXXXXXXXXTIDQGDTLVFASKKATVDDIETQ 444
V +G N+ + Q+ V + + +V+ S + D +
Sbjct: 180 LVSIGNPNKPNKAVNQLAIWVDAKQKKQKLFDILRSQNHFKPPAVVYVSSRVGADLLANA 239
Query: 445 LS-QRGFKVAALHGDKDQASRMDILQKFKSGVYHVLIATDVAARGLDIKSIKTVVNFDIA 503
++ G K ++HG+K R D++ F G VL++T V RG+D+ ++ V+ FD+
Sbjct: 240 ITVVTGVKALSIHGEKPMKERRDVMGSFLGGEVPVLVSTGVLGRGVDLLVVRQVIVFDMP 299
Query: 504 KDMDMHVHRIGRTGRAGDKEGVAYTLITQKEARFAGELVNSLIAAGQNVSTELMDL 559
+ ++H IGR R G+K G A + + + +LV +L ++G + EL++L
Sbjct: 300 STIKEYIHVIGRASRMGEK-GTAIVFVNEDDRNLFPDLVAALKSSGAAIPKELINL 354
>AT5G11170.1 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3553334-3556646 FORWARD LENGTH=427
Length = 427
Score = 167 bits (422), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 104/354 (29%), Positives = 173/354 (48%), Gaps = 14/354 (3%)
Query: 182 FEDCGFPPPVMSAIKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLPMIVH 241
F D P ++ AI G+E P+ +Q + +P + G D+I AK+G GKTA FVL +
Sbjct: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
Query: 242 IMDQPELQKEEGPI-GVICAPTRELAQQIYLESKKFAKSY-GIRVSAVYGGMSKLEQFKE 299
I P G + ++ TRELA QI E +F+ +VS YGG++
Sbjct: 108 IEPSP------GQVSALVLCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNIKIHKDL 161
Query: 300 LKAGC-EIVVATPGRLIDMLKMKALTMTRATYLVLDEADRMFD-LGFEPQVRSIVGQIRP 357
LK C IVV TPGR++ + + K L++ + +LDE D+M + L V+ I
Sbjct: 162 LKNECPHIVVGTPGRVLALAREKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPH 221
Query: 358 DRQTSLFSATMPRKVEKLAREILSDPVRVIVG-EVGMANEDITQVVQVVPSDSXXXXXXX 416
D+Q +FSAT+ +++ + ++ + DP+ + V E + + Q +
Sbjct: 222 DKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQ--HYIKLSEMEKNRKL 279
Query: 417 XXXXXTIDQGDTLVFASKKATVDDIETQLSQRGFKVAALHGDKDQASRMDILQKFKSGVY 476
+D ++F + ++ L + F +H Q R+ + FK G
Sbjct: 280 NDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKSFKEGHK 339
Query: 477 HVLIATDVAARGLDIKSIKTVVNFDIAKDMDMHVHRIGRTGRAGDKEGVAYTLI 530
+L+ATD+ RG+DI+ + V+N+D+ D ++HR+GR GR G K G+A T +
Sbjct: 340 RILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTK-GLAITFV 392
>AT5G11200.1 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3567389-3570686 FORWARD LENGTH=427
Length = 427
Score = 167 bits (422), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 104/354 (29%), Positives = 173/354 (48%), Gaps = 14/354 (3%)
Query: 182 FEDCGFPPPVMSAIKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLPMIVH 241
F D P ++ AI G+E P+ +Q + +P + G D+I AK+G GKTA FVL +
Sbjct: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
Query: 242 IMDQPELQKEEGPI-GVICAPTRELAQQIYLESKKFAKSY-GIRVSAVYGGMSKLEQFKE 299
I P G + ++ TRELA QI E +F+ +VS YGG++
Sbjct: 108 IEPSP------GQVSALVLCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNIKIHKDL 161
Query: 300 LKAGC-EIVVATPGRLIDMLKMKALTMTRATYLVLDEADRMFD-LGFEPQVRSIVGQIRP 357
LK C IVV TPGR++ + + K L++ + +LDE D+M + L V+ I
Sbjct: 162 LKNECPHIVVGTPGRVLALAREKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPH 221
Query: 358 DRQTSLFSATMPRKVEKLAREILSDPVRVIVG-EVGMANEDITQVVQVVPSDSXXXXXXX 416
D+Q +FSAT+ +++ + ++ + DP+ + V E + + Q +
Sbjct: 222 DKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQ--HYIKLSEMEKNRKL 279
Query: 417 XXXXXTIDQGDTLVFASKKATVDDIETQLSQRGFKVAALHGDKDQASRMDILQKFKSGVY 476
+D ++F + ++ L + F +H Q R+ + FK G
Sbjct: 280 NDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKSFKEGHK 339
Query: 477 HVLIATDVAARGLDIKSIKTVVNFDIAKDMDMHVHRIGRTGRAGDKEGVAYTLI 530
+L+ATD+ RG+DI+ + V+N+D+ D ++HR+GR GR G K G+A T +
Sbjct: 340 RILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTK-GLAITFV 392
>AT5G05450.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:1612077-1615195
FORWARD LENGTH=593
Length = 593
Score = 166 bits (421), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 118/364 (32%), Positives = 181/364 (49%), Gaps = 18/364 (4%)
Query: 191 VMSAIKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELQ- 249
++ A+ + +E T +Q +P++ S +D+ A TGSGKT AFV+P++ +
Sbjct: 27 IIEALNQSDFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEILRRSTSFPP 86
Query: 250 KEEGPIGVICAPTRELAQQIYLESKKFAKSYG-IRVSAVYGGMSKLEQFKELKA-GCEIV 307
K +GVI +PTREL+ QIY ++ F + + + GG K ++ GC ++
Sbjct: 87 KPHQVMGVIISPTRELSTQIYNVAQPFVSTLANVNSVLLVGGREVKADMKIIEEEGCNVL 146
Query: 308 VATPGRLIDML-KMKALTMTRATYLVLDEADRMFDLGFEPQVRSIVGQIRPDRQTSLFSA 366
+ TPGRL D++ +M+ L L+LDEADR+ ++GF+ QV I+ ++ R+T LFSA
Sbjct: 147 IGTPGRLSDIMERMEILDFRNLEILILDEADRLLEMGFQRQVNYIISRLPKQRRTGLFSA 206
Query: 367 TMPRKVEKLAREILSDPVRVIV-------GEVGMANEDITQVVQVVPSDSXXXXXXXXXX 419
T VE+LA+ L +PVRV V + N + + +
Sbjct: 207 TQTEGVEELAKAGLRNPVRVEVRAKSKSESSQQLTNSKTPSGLHLEYMECEADKKSSQLV 266
Query: 420 XXTIDQGDT--LVFASKKATVDDIETQLSQ----RGFKVAALHGDKDQASRMDILQKFKS 473
I D +VF A+VD LS+ + + +HGD Q +R L F
Sbjct: 267 DLLIKNSDKKLIVFFMTCASVDYWGLVLSKIPALKSISLIPIHGDMKQNARDKALASFTK 326
Query: 474 GVYHVLIATDVAARGLDIKSIKTVVNFDIAKDMDMHVHRIGRTGRAGDKEGVAYTLITQK 533
L+ TDVAARGLDI I VV +D +D +M HR GRT R G ++G A + K
Sbjct: 327 ASSGALLCTDVAARGLDIPGIDYVVQYDPPQDPNMFNHRAGRTARLG-RQGRAIVFLLPK 385
Query: 534 EARF 537
E +
Sbjct: 386 EEAY 389
>AT1G12770.1 | Symbols: ISE1, EMB1586 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr1:4351888-4353543 FORWARD LENGTH=551
Length = 551
Score = 165 bits (418), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 115/395 (29%), Positives = 179/395 (45%), Gaps = 52/395 (13%)
Query: 180 KTFEDCGFPPPVMSAIKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLPMI 239
K+FE+ G P ++ +++++G+ PT +Q A+P ++ G D + + TGSGKT A++LP++
Sbjct: 110 KSFEELGLPDSLLDSLEREGFSVPTDVQSAAVPAIIKGHDAVIQSYTGSGKTLAYLLPIL 169
Query: 240 VHI--------MDQPELQKEEGPIGVICAPTRELAQQIYLESKKFAKSYGIR-VSAVYGG 290
I E K +I AP+REL QI E +K R V + GG
Sbjct: 170 SEIGPLAEKSRSSHSENDKRTEIQAMIVAPSRELGMQIVREVEKLLGPVHRRMVQQLVGG 229
Query: 291 MSKLEQFKELKAGC-EIVVATPGRLIDMLKMKALTMTRATYLVLDEADRMFDLGFEPQVR 349
+++ Q + LK IVV TPGR+ ++ K L +LVLDE D + F +
Sbjct: 230 ANRMRQEEALKKNKPAIVVGTPGRIAEISKGGKLHTHGCRFLVLDEVDELLSFNFREDIH 289
Query: 350 SIVGQI--------------RPDRQTSLFSATMPRKVEKLAREILSDPVRVIVGEV---- 391
I+ + R +RQT L SAT+P V + A+ +PV V +V
Sbjct: 290 RILEHVGKRSGAGPKGEVDERANRQTILVSATVPFSVIRAAKSWSHEPVLVQANKVTPLD 349
Query: 392 ---------------GMANEDITQVVQVVP---------SDSXXXXXXXXXXXXTIDQGD 427
A+ I +Q +P S +D
Sbjct: 350 TVQPSAPVMSLTPTTSEADGQIQTTIQSLPPALKHYYCISKHQHKVDTLRRCVHALDAQS 409
Query: 428 TLVFASKKATVDDIETQLSQRGFKVAALHGDKDQASRMDILQKFKSGVYHVLIATDVAAR 487
+ F + + D+ +L RG A +HGD + R +L+KFK+G VL+ +++AR
Sbjct: 410 VIAFMNHSRQLKDVVYKLEARGMNSAEMHGDLGKLGRSTVLKKFKNGEIKVLVTNELSAR 469
Query: 488 GLDIKSIKTVVNFDIAKDMDMHVHRIGRTGRAGDK 522
GLD+ VVN ++ D + HR GRTGR G K
Sbjct: 470 GLDVAECDLVVNLELPTDAVHYAHRAGRTGRLGRK 504
>AT3G53110.1 | Symbols: LOS4 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr3:19687968-19690423 FORWARD LENGTH=496
Length = 496
Score = 163 bits (413), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 111/365 (30%), Positives = 175/365 (47%), Gaps = 22/365 (6%)
Query: 182 FEDCGFPPPVMSAIK-KQGYEKPTSIQCQALPVVLS--GRDIIGIAKTGSGKTAAFVLPM 238
FED P +M + + +EKP+ IQ +LP++++ + +I A GSGKT FVL M
Sbjct: 93 FEDLNLSPELMKGLYVEMKFEKPSKIQAISLPMIMTPPHKHLIAQAHNGSGKTTCFVLGM 152
Query: 239 IVHIMDQPELQKEEGPIGVICAPTRELAQQIYLESKKFAKSYGIRVSAVYGGMSKLEQFK 298
+ + P L++ P + PTRELA Q +K K GI ++
Sbjct: 153 LSRV--DPTLRE---PQALCICPTRELANQNMEVLQKMGKFTGITAELAVPDSTRGAPAA 207
Query: 299 ELKA--GCEIVVATPGRLIDMLKMKALTMTRATYLVLDEADRMFDL-GFEPQVRSI---V 352
A +V+ TPG L + K L + LV DEAD M GF I +
Sbjct: 208 TRGAPVSAHVVIGTPGTLKKWMAFKRLGLNHLKILVFDEADHMLATDGFRDDSLKIMKDI 267
Query: 353 GQIRPDRQTSLFSATMPRKVEKLAREILSDPVRVIVGEVGMANEDITQVVQVVPSDSXXX 412
G++ P+ Q LFSAT V+ + DP ++ V +A + + Q V P +
Sbjct: 268 GRVNPNFQVLLFSATFNETVKDFVARTVKDPNQLFVKREDLALDSVKQYKVVCPKEQNKI 327
Query: 413 XXXXXXXXXTIDQGDTLVFASKKATVDDIETQLSQRGFKVAALHGDKDQASRMDILQKFK 472
D G T++F KA+ + L++ G+ V ++HG+ ++ R I+++FK
Sbjct: 328 EVIKDQIMELGDIGQTIIFVKTKASAQKVHKALAEMGYDVTSVHGNLTESDRDKIVKEFK 387
Query: 473 SGVYHVLIATDVAARGLDIKSIKTVVNFDIAK-------DMDMHVHRIGRTGRAGDKEGV 525
+ VLIATDV ARG D + + VVN+++ D ++++HR+GR GR G K G
Sbjct: 388 ECLTQVLIATDVIARGFDQQRVNLVVNYNLPTKYETGEPDYEVYLHRVGRAGRFGRK-GA 446
Query: 526 AYTLI 530
+ L+
Sbjct: 447 VFNLL 451
>AT5G54910.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr5:22298668-22301719 REVERSE LENGTH=739
Length = 739
Score = 163 bits (412), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 119/346 (34%), Positives = 167/346 (48%), Gaps = 10/346 (2%)
Query: 179 VKTFEDCGFPPPVMSAIKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLPM 238
V+ F +K Y T +Q A+P L GRDI+G A+TGSGKT AFV+P
Sbjct: 70 VRKFAQLPISDKTKRGLKDAKYVDMTDVQSAAIPHALCGRDILGAARTGSGKTLAFVIP- 128
Query: 239 IVHIMDQPELQKEEGPIGVICAPTRELAQQIYLESKKFAKSYGIRVSAVYGGMSKLEQFK 298
I+ + + E+G +I +PTRELA Q + K K + + GG ++ K
Sbjct: 129 ILEKLHRERWSPEDGVGCIIISPTRELAAQTFGVLNKVGKFHKFSAGLLIGGREGVDVEK 188
Query: 299 ELKAGCEIVVATPGRLID-MLKMKALTMTRATYLVLDEADRMFDLGFEPQVRSIVGQIRP 357
E I+V PGRL+ M + + L+LDEADR+ D F+ Q+ I+ Q+
Sbjct: 189 ERVHEMNILVCAPGRLLQHMDETPNFECPQLQILILDEADRVLDSAFKGQLDPIISQLPK 248
Query: 358 DRQTSLFSATMPRKVEKLAREILSDP--VRVIVGEVGMANEDITQVVQVVPSDSXXXXXX 415
RQT LFSAT +KV+ LAR L DP + V V + Q V +VP +
Sbjct: 249 HRQTLLFSATQTKKVKDLARLSLRDPEYISVHAEAVTATPTSLMQTVMIVPVEK--KLDM 306
Query: 416 XXXXXXTIDQGDTLVFASKKATVDDIETQLSQR--GFKVAALHGDKDQASRMDILQKFKS 473
T LVF S K V + ++ G + +LHG Q RM + +F
Sbjct: 307 LWSFIKTHLNSRILVFLSTKKQVKFVHEAFNKLRPGIPLKSLHGKMSQEKRMGVYSQFIE 366
Query: 474 GVYHVLIATDVAARGLDI-KSIKTVVNFDIAKDMDMHVHRIGRTGR 518
VL TDV ARGLD K++ VV D +D+ ++HR+GRT R
Sbjct: 367 R-QSVLFCTDVLARGLDFDKAVDWVVQVDCPEDVASYIHRVGRTAR 411
>AT4G09730.1 | Symbols: RH39 | RH39 | chr4:6136333-6139510 FORWARD
LENGTH=621
Length = 621
Score = 161 bits (407), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 117/386 (30%), Positives = 184/386 (47%), Gaps = 21/386 (5%)
Query: 177 KPVKTFEDCGFPPPVMSAIKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVL 236
K V+ F++ G VM A+++ E PT IQC +P V+ + ++ + TGSGKT A++L
Sbjct: 109 KLVENFQELGLSEEVMGALQELNIEVPTEIQCIGIPAVMERKSVVLGSHTGSGKTLAYLL 168
Query: 237 PMIVHIMDQPELQ-----KEEGPIGVICAPTRELAQQIYLESKKFAKSYGIRVSAVYGGM 291
P IV +M + E K P V+ PTREL++Q+Y +K + R V GG
Sbjct: 169 P-IVQLMREDEANLGKKTKPRRPRTVVLCPTRELSEQVYRVAKSISHHARFRSILVSGGS 227
Query: 292 SKLEQFKELKAGCEIVVATPGRLIDMLKMKALTMTRATYLVLDEADRMFDLGFEPQVRSI 351
Q L ++VV TPGR++ ++ + YLVLDEAD MFD GF P++R
Sbjct: 228 RIRPQEDSLNNAIDMVVGTPGRILQHIEEGNMVYGDIAYLVLDEADTMFDRGFGPEIRKF 287
Query: 352 VGQIRPDR--------QTSLFSATMPRKVEKLAREILS--DPVRVIVGEVGMANEDITQV 401
+ + QT L +ATM V+KL E + +R +AN
Sbjct: 288 LAPLNQRALKTNDQGFQTVLVTATMTMAVQKLVDEEFQGIEHLRTSTLHKKIANAR-HDF 346
Query: 402 VQVVPSDSXXXXXXXXXXXXTIDQGDTLVFASKKATVDDIETQLSQRGFKVAALHGDKDQ 461
+++ + +VF + + ++ LS+ HG+
Sbjct: 347 IKLSGGEDKLEALLQVLEPSLAKGSKVMVFCNTLNSSRAVDHYLSENQISTVNYHGEVPA 406
Query: 462 ASRMDILQKFK--SGVYHVLIATDVAARGLDIKSIKTVVNFDIAKDMDMHVHRIGRTGRA 519
R++ L+KFK G L+ TD+AARGLD+ + VV FD K+ ++HR GRT R
Sbjct: 407 EQRVENLKKFKDEEGDCPTLVCTDLAARGLDL-DVDHVVMFDFPKNSIDYLHRTGRTARM 465
Query: 520 GDKEGVAYTLITQKEARFAGELVNSL 545
G K G +L+++K+ A + ++
Sbjct: 466 GAK-GKVTSLVSRKDQMLAARIEEAM 490
>AT3G16840.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:5738020-5743042
REVERSE LENGTH=826
Length = 826
Score = 152 bits (385), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 121/415 (29%), Positives = 195/415 (46%), Gaps = 72/415 (17%)
Query: 189 PPVMSAIKKQGYEKPTSIQCQALPVV-LSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPE 247
P +M +I + +++PT IQ V G+D+IG A+TGSGKT AF LP++ ++D+ E
Sbjct: 199 PLLMKSIYRLDFKEPTKIQKACFNVAAYQGKDVIGAAETGSGKTLAFGLPILQRLLDERE 258
Query: 248 -------LQKEEGPI--------GVICAPTRELAQQIYLESKKFAKSYGIRVSAVYGGMS 292
L+ EE +I PTRELA Q+ + AK+ ++V + GGM
Sbjct: 259 KVGKLYALKGEEAQKYAADGYLRALIITPTRELALQVTEHLENAAKNLSVKVVPIVGGMF 318
Query: 293 KLEQFKELKAGCEIVVATPGRLIDML---KMKALTMTRATYLVLDEADRMFDLGFEPQVR 349
+Q + LK EIVVATPGRL +++ + + + ++ VLDEADRM + G +++
Sbjct: 319 SEKQERRLKEKPEIVVATPGRLWELMSAGEKHLVELHSLSFFVLDEADRMVERGHFRELQ 378
Query: 350 SIVGQI------------------------RPDRQTSLFSATMP-----RKVEKLAREIL 380
SI+ + + RQT +FSAT+ RK KL R
Sbjct: 379 SILDLLPVTDKPNEGKTQTVKSNDTVLNVPKKKRQTFVFSATIALSSDFRK--KLKRGSS 436
Query: 381 S---------DPVRVIVGEVGMANE----DITQVVQVVP--------SDSXXXXXXXXXX 419
+ + V+ GM + D+T + P +
Sbjct: 437 KSKQSSSGEVNSIEVLSERAGMRDNVAIIDLTTTSILAPKIEESFIKCEEKEKDAYLYYI 496
Query: 420 XXTIDQGDTLVFASKKATVDDIETQLSQRGFKVAALHGDKDQASRMDILQKFKSGVYHVL 479
QG T+VF + + I L G V L + Q +R+ + +F++ +L
Sbjct: 497 LSVHGQGRTIVFCTSVTDLRHISGLLKILGLDVCTLFSEMKQRARLKSIDRFRASENGIL 556
Query: 480 IATDVAARGLDIKSIKTVVNFDIAKDMDMHVHRIGRTGRAGDKEGVAYTLITQKE 534
IATD+ ARG+DIK+++T++++ + +++VHR GRT RA +G + LI E
Sbjct: 557 IATDLVARGIDIKNVRTIIHYKLPHSAEVYVHRCGRTARAF-ADGCSIALIEPNE 610
>AT5G11170.2 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3554272-3556646 FORWARD LENGTH=344
Length = 344
Score = 142 bits (359), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 93/317 (29%), Positives = 154/317 (48%), Gaps = 14/317 (4%)
Query: 219 DIIGIAKTGSGKTAAFVLPMIVHIMDQPELQKEEGPI-GVICAPTRELAQQIYLESKKFA 277
D+I AK+G GKTA FVL + I P G + ++ TRELA QI E +F+
Sbjct: 2 DVICQAKSGMGKTAVFVLSTLQQIEPSP------GQVSALVLCHTRELAYQICNEFVRFS 55
Query: 278 KSY-GIRVSAVYGGMSKLEQFKELKAGC-EIVVATPGRLIDMLKMKALTMTRATYLVLDE 335
+VS YGG++ LK C IVV TPGR++ + + K L++ + +LDE
Sbjct: 56 TYLPDTKVSVFYGGVNIKIHKDLLKNECPHIVVGTPGRVLALAREKDLSLKNVRHFILDE 115
Query: 336 ADRMFD-LGFEPQVRSIVGQIRPDRQTSLFSATMPRKVEKLAREILSDPVRVIVG-EVGM 393
D+M + L V+ I D+Q +FSAT+ +++ + ++ + DP+ + V E +
Sbjct: 116 CDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKL 175
Query: 394 ANEDITQVVQVVPSDSXXXXXXXXXXXXTIDQGDTLVFASKKATVDDIETQLSQRGFKVA 453
+ Q + +D ++F + ++ L + F
Sbjct: 176 TLHGLVQ--HYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSI 233
Query: 454 ALHGDKDQASRMDILQKFKSGVYHVLIATDVAARGLDIKSIKTVVNFDIAKDMDMHVHRI 513
+H Q R+ + FK G +L+ATD+ RG+DI+ + V+N+D+ D ++HR+
Sbjct: 234 CIHSGMSQEERLTRYKSFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRV 293
Query: 514 GRTGRAGDKEGVAYTLI 530
GR GR G K G+A T +
Sbjct: 294 GRAGRFGTK-GLAITFV 309
>AT3G06980.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:2201531-2204662 FORWARD LENGTH=781
Length = 781
Score = 139 bits (351), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 108/415 (26%), Positives = 188/415 (45%), Gaps = 33/415 (7%)
Query: 157 QDVTDYR---KSLAIRVSGFDVPKPVKTFEDCGFPPPVMSAIKKQGYEKPTSIQCQALPV 213
+D+ D+R K+ R +GF KTF + G +M A+K+Q +++P IQ A
Sbjct: 351 RDMDDWRERNKTKDTRETGF---FSRKTFAEIGCSEDMMKALKEQNFDRPAHIQAMAFSP 407
Query: 214 VLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELQKEE-----GPIGVICAPTRELAQQ 268
V+ G+ I ++GSGKT A+++P+I + ++ ELQ P ++ PT ELA Q
Sbjct: 408 VIDGKSCIIADQSGSGKTLAYLVPVIQRLREE-ELQGHSKSSPGCPRVIVLVPTAELASQ 466
Query: 269 IYLESKKFAKS-YGIRVSAVYGGMSKLEQFKELKAGCEIVVATPGRLIDMLKMKALTMTR 327
+ + +KS R V GG + Q + L+ G ++++ATPGR ++ L ++
Sbjct: 467 VLANCRSISKSGVPFRSMVVTGGFRQRTQLENLEQGVDVLIATPGRFTYLMNEGILGLSN 526
Query: 328 ATYLVLDEADRMF-DLGFEPQVRSIVGQIRPDRQTSLFSATMPRKVEKLAREILSDPVRV 386
+LDE D +F D FE +++++ Q +AT+P ++ E+ D V
Sbjct: 527 LRCAILDEVDILFGDDEFEAALQNLINSSPVTAQYLFVTATLPLEIYNKLVEVFPDCEVV 586
Query: 387 IVGEVGMANEDITQVVQVVPSDSXXXXX-------XXXXXXXTIDQG---DTLVFASKKA 436
+ V + + + + D +++ T++F +K
Sbjct: 587 MGPRVHRVSNALEEFLVDCSGDDNAEKTPETAFQNKKTALLQIMEENPVSKTIIFCNKIE 646
Query: 437 TVDDIETQL-----SQRGFKVAALHGDKDQASRMDILQKFKSGVYH----VLIATDVAAR 487
T +E +R V H Q SR+ +Q+F S L+ TD A+R
Sbjct: 647 TCRKVENIFKRVDRKERQLHVLPFHAALSQESRLTNMQEFTSSQPEENSLFLVCTDRASR 706
Query: 488 GLDIKSIKTVVNFDIAKDMDMHVHRIGRTGRAGDKEGVAYTLITQKEARFAGELV 542
G+D + VV FD +D +V R+GRT R +G A+ + K+ A ++
Sbjct: 707 GIDFSGVDHVVLFDFPRDPSEYVRRVGRTARGARGKGKAFIFVVGKQVGLARRII 761
>AT1G71280.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:26870262-26872152 REVERSE LENGTH=465
Length = 465
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 99/306 (32%), Positives = 151/306 (49%), Gaps = 24/306 (7%)
Query: 191 VMSAIKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELQ- 249
++ A+ + G+E T +Q + +P + S +D++ A TGSGKT AF+LP I I
Sbjct: 28 IIEALDRSGFEVCTPVQAETIPFLCSHKDVVVDAATGSGKTLAFLLPFIEIIRRSNSYPP 87
Query: 250 KEEGPIGVICAPTRELAQQIYLESKKFAKSYGIRVSAVYGGMSKLEQFKELKAGCEIVVA 309
K +GVI +PTREL+ QI+ ++ + + V M+ LE+ G +++
Sbjct: 88 KPHQVMGVIISPTRELSAQIHKVARAVRLDFA-KCREVEADMNTLEE-----EGANLLIG 141
Query: 310 TPGRLIDMLK-MKALTMTRATYLVLDEADRMFDLGFEPQVRSIVGQIRPDRQTSLFSATM 368
TPGRL DM+K M+ L L+LDEADR+ D+GF+ QV I+ ++ R+T LFSAT
Sbjct: 142 TPGRLSDMMKRMEFLDFRNLEILILDEADRLLDMGFQKQVNYIISRLPKQRRTGLFSATQ 201
Query: 369 PRKVEKLAREILSDPVRVIVGEVGMANEDITQVVQVVPSDSXXXXXXXXXXXXTIDQGDT 428
+ V LA+ L +P A++ +Q+V ++ + +D
Sbjct: 202 TQAVADLAKAGLRNPYLKC-----EADQKSSQLVHLLIENKNKKLVVFFMTCACVDYWGL 256
Query: 429 LVFASKKATVDDIETQLSQRGFKVAALHGDKDQASRMDILQKFKSGVYHVLIATDVAARG 488
++ SK ++ I HG DQ R L F VL+ TDVAARG
Sbjct: 257 VI--SKIPSLKSIS---------FFPTHGKMDQKGRDTALASFTEASSGVLLCTDVAARG 305
Query: 489 LDIKSI 494
LDI I
Sbjct: 306 LDIPGI 311
>AT2G40700.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:16976783-16979392
FORWARD LENGTH=609
Length = 609
Score = 129 bits (323), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 82/244 (33%), Positives = 129/244 (52%), Gaps = 25/244 (10%)
Query: 181 TFEDCGFPPPVMSAIKKQ-GYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLPMI 239
+F G + +K++ G+E PT +Q QA+PV+LSGRD++ A TG+GKT A++ P+I
Sbjct: 30 SFSSLGLDTKLSDQLKERMGFEAPTLVQAQAIPVILSGRDVLVNAPTGTGKTIAYLAPLI 89
Query: 240 VHIMDQ-PELQKEEGPIGVICAPTRELAQQIYLESKKFAKSYGIRVSA-VYGGMSKLEQF 297
H+ P++ + G ++ PTREL Q+Y +K + V V GG K ++
Sbjct: 90 HHLQGHSPKVDRSHGTFALVIVPTRELCLQVYETLEKLLHRFHWIVPGYVMGGEKKAKEK 149
Query: 298 KELKAGCEIVVATPGRLIDMLKMKA-LTMTRATYLVLDEADRMFDLGFEPQVRSIV---- 352
L+ G I++ATPGRL+D LK A +++ DEAD + +LG+ ++ I+
Sbjct: 150 ARLRKGISILIATPGRLLDHLKNTASFVHKNLRWVIFDEADSILELGYGKEIEQIIKLLG 209
Query: 353 -GQ--------IRP---DRQTSLFSATMPRKVEKLAREILSDPVRVIVGEVGMANEDITQ 400
GQ I P +Q L SAT+ KV LA+ L DPV +G+ N + Q
Sbjct: 210 SGQNEQGEEDDIVPKGIQKQNLLLSATLNDKVNDLAKLSLDDPVM-----IGLDNTKLQQ 264
Query: 401 VVQV 404
+ +
Sbjct: 265 NLSI 268
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Query: 451 KVAALHGDKDQASRMDILQKFKSGVYHVLIATDVAARGLDIKSIKTVVNFDIAKDMDMHV 510
K LHG +Q R FK+ VL++TDVAARGLD ++ ++ +D + +V
Sbjct: 375 KTFRLHGSMEQEDRRSAFGTFKTEKQAVLLSTDVAARGLDFPKVRCIIQYDCPGEATEYV 434
Query: 511 HRIGRTGRAGDKEGVAYTLITQKEARFAGEL 541
HR+GRT R G+K G A + E + EL
Sbjct: 435 HRVGRTARIGEK-GEALLFLQPIEIDYLKEL 464
>AT5G11200.3 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3567389-3570686 FORWARD LENGTH=468
Length = 468
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 100/395 (25%), Positives = 165/395 (41%), Gaps = 55/395 (13%)
Query: 182 FEDCGFPPPVMSAIKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLPMIVH 241
F D P ++ AI G+E P+ +Q + +P + G D+I AK+G GKTA FVL +
Sbjct: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
Query: 242 IMDQPELQKEEGPI-GVICAPTRELAQQIYLESKKFAKSY-GIRVSAVYGGMSKLEQFKE 299
I P G + ++ TRELA QI E +F+ +VS YGG++
Sbjct: 108 IEPSP------GQVSALVLCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNIKIHKDL 161
Query: 300 LKAGC-EIVVATPGRLIDMLK--------------------MKALTMTRATYLVL----- 333
LK C IVV TPGR++ + + +++L M R +
Sbjct: 162 LKNECPHIVVGTPGRVLALAREKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPH 221
Query: 334 DEADRMFDLGFEPQVRSIVGQIRPDRQTSLFS--------------ATMPR-KVEKLARE 378
D+ MF ++R + + D +L PR ++
Sbjct: 222 DKQVMMFSATLSKEIRPVCKKFMQDGLRTLSGDSVALWWVGFGSGYCVFPRFHRARMGLN 281
Query: 379 ILS--DPVRVIVG-EVGMANEDITQVVQVVPSDSXXXXXXXXXXXXTIDQGDTLVFASKK 435
+ S DP+ + V E + + Q + +D ++F
Sbjct: 282 VPSNIDPMEIYVDDEAKLTLHGLVQ--HYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSV 339
Query: 436 ATVDDIETQLSQRGFKVAALHGDKDQASRMDILQKFKSGVYHVLIATDVAARGLDIKSIK 495
+ ++ L + F +H Q R+ + FK G +L+ATD+ RG+DI+ +
Sbjct: 340 SRAAELNKLLVECNFPSICIHSGMSQEERLTRYKSFKEGHKRILVATDLVGRGIDIERVN 399
Query: 496 TVVNFDIAKDMDMHVHRIGRTGRAGDKEGVAYTLI 530
V+N+D+ D ++HR+GR GR G K G+A T +
Sbjct: 400 IVINYDMPDSADTYLHRVGRAGRFGTK-GLAITFV 433
>AT5G11200.2 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3567389-3570686 FORWARD LENGTH=486
Length = 486
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 107/205 (52%), Gaps = 10/205 (4%)
Query: 182 FEDCGFPPPVMSAIKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLPMIVH 241
F D P ++ AI G+E P+ +Q + +P + G D+I AK+G GKTA FVL +
Sbjct: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
Query: 242 IMDQPELQKEEGPI-GVICAPTRELAQQIYLESKKFAKSY-GIRVSAVYGGMSKLEQFKE 299
I P G + ++ TRELA QI E +F+ +VS YGG++
Sbjct: 108 IEPSP------GQVSALVLCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNIKIHKDL 161
Query: 300 LKAGC-EIVVATPGRLIDMLKMKALTMTRATYLVLDEADRMFD-LGFEPQVRSIVGQIRP 357
LK C IVV TPGR++ + + K L++ + +LDE D+M + L V+ I
Sbjct: 162 LKNECPHIVVGTPGRVLALAREKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPH 221
Query: 358 DRQTSLFSATMPRKVEKLAREILSD 382
D+Q +FSAT+ +++ + ++ + D
Sbjct: 222 DKQVMMFSATLSKEIRPVCKKFMQD 246
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 57/108 (52%), Gaps = 1/108 (0%)
Query: 423 IDQGDTLVFASKKATVDDIETQLSQRGFKVAALHGDKDQASRMDILQKFKSGVYHVLIAT 482
+D ++F + ++ L + F +H Q R+ + FK G +L+AT
Sbjct: 345 LDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKSFKEGHKRILVAT 404
Query: 483 DVAARGLDIKSIKTVVNFDIAKDMDMHVHRIGRTGRAGDKEGVAYTLI 530
D+ RG+DI+ + V+N+D+ D ++HR+GR GR G K G+A T +
Sbjct: 405 DLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTK-GLAITFV 451
>AT4G15850.1 | Symbols: ATRH1, RH1 | RNA helicase 1 |
chr4:9001426-9004534 FORWARD LENGTH=522
Length = 522
Score = 105 bits (263), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 99/388 (25%), Positives = 167/388 (43%), Gaps = 69/388 (17%)
Query: 218 RDIIGIAKTGSGKTAAFVLPMIVHIMDQPELQKEEGPIGVICAPTRELAQQIYLESKKFA 277
RDI + TGSGKT ++ LP++ + +P ++ PTR+LA Q+ A
Sbjct: 73 RDICVNSPTGSGKTLSYALPIVQLLASRPVRCLR----ALVVLPTRDLALQVKDVFDAIA 128
Query: 278 KSYGIRV------SAVYGGMSKLEQFKELKAG-C--------------EIVVATPGRLID 316
+ G+ V S++ G +S+L + +L AG C +I+VATPGRL+D
Sbjct: 129 PAVGLSVGSAVGQSSIAGEISQLIKTPKLDAGICYDPDDLSQNLESAVDILVATPGRLMD 188
Query: 317 ML-KMKALTMTRATYLVLDEADRMFDLG----------------------FEPQVRSIVG 353
+ K T+ YLV+DE DR+ F P V S G
Sbjct: 189 HINNTKGFTLEHLRYLVVDETDRLLREAYQSWLPTVLQLTQTSDDSLFPSFTPFVPSAFG 248
Query: 354 QIRPDRQTS----------------LFSATMPRKVEKLAREILSDPVRVIVGEVGMANED 397
++ R+ S + SAT+ + KL + L P+ + G +
Sbjct: 249 SLQTVRRQSVERGFKGKPYPRLVKMVLSATLTQDPSKLIQLDLHHPLFMTTGGSRYRLPE 308
Query: 398 ITQVVQVVPSDSXXXXXXXXXXXXTIDQGDTLVFASKKATVDDIETQLSQRG---FKVAA 454
+ ++++ ++ + + ++F S T + L+ G K
Sbjct: 309 KLECLRLI-CETGMKPVYLVALLKSWEGEKCIIFTSSVETTRRLCKLLNFFGDPKIKAKE 367
Query: 455 LHGDKDQASRMDILQKFKSGVYHVLIATDVAARGLDIKSIKTVVNFDIAKDMDMHVHRIG 514
G +Q+ R L+ F+ G VL+A+D RG+D+K + V+N+D+ +HR G
Sbjct: 368 YSGGLNQSLRSKELKAFRKGDIQVLVASDALTRGMDVKGVTNVINYDMPPFAKTFIHRAG 427
Query: 515 RTGRAGDKEGVAYTLITQKEARFAGELV 542
RT RAG + G +TL++ E R +L+
Sbjct: 428 RTARAG-QAGRCFTLLSNHEVRRFSKLL 454
>AT5G19210.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:6461444-6463687
FORWARD LENGTH=472
Length = 472
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 112/403 (27%), Positives = 181/403 (44%), Gaps = 44/403 (10%)
Query: 178 PVKTFEDC-GF-PPPVMSAIKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFV 235
P+ + C GF P ++ +++ G+ PT IQ +ALP + +GRD I A+TGSGKT ++
Sbjct: 72 PLTLRQICQGFVPEHILHRMEEIGFVFPTDIQREALPTLFTGRDCILHAQTGSGKTLTYL 131
Query: 236 LPMIVHIMDQPELQKEEGPIGVICAPTRELAQQI-----YLESKKFAKSYGIRVSAVYGG 290
L ++ + P+ + VI PTREL Q+ L +K G V A+ G
Sbjct: 132 L--LIFSLINPQRSSVQ---AVIVVPTRELGMQVTKVARMLAAKSEIDVKGCTVMALLDG 186
Query: 291 MSKLEQFKELKAG-CEIVVATPGRLIDMLKMKALTMTRATYLVLDEADRMF----DLGFE 345
+ LKA I+VAT L ML+ + LV+DE D +F +G
Sbjct: 187 GTLRRHKSWLKAEPPAILVATVASLCHMLEKHIFRIDSVRVLVVDEVDFLFYSSKQVG-- 244
Query: 346 PQVRSIVGQIRP--DRQTSLFSATMPRK---VEKLAREILSDPVRVIVGEVGMANEDITQ 400
VR ++ RQT SA++P+ V ++ + V V + +
Sbjct: 245 -SVRKLLTSFSSCDKRQTVFASASIPQHKHFVHDCIQQKWTKRDVVHVHVSAIMPMPLCL 303
Query: 401 VVQVVPSDSXXXXXXXXXXXXTIDQGDTLVFA------SKKATVDDIETQL------SQR 448
+ + V + + ++F SKKA D T L S +
Sbjct: 304 LHRFVMCEKTNKHQVLLALLESDAPESAIIFVGEQSEKSKKAGNDPSTTLLMEFLKTSYK 363
Query: 449 G-FKVAALHGDKDQASRMDILQKFKSGVYHVLIATDVAARGLDIKSIKTVVNFDIAKDMD 507
G ++ L GD + SR L + + G +L++TD+AARG+D+ + NFD+ + +
Sbjct: 364 GSLEILLLEGDMNFNSRAASLTEIRQGGGFLLVSTDIAARGIDLPETTHIFNFDLPQTVT 423
Query: 508 MHVHRIGRTGRA--GDKEGVAYTLITQKE----ARFAGELVNS 544
++HR GR GR D++ + LIT +E R+ EL+ S
Sbjct: 424 DYLHRAGRAGRKPFSDRKCIVANLITSEERFVLQRYENELMFS 466
>AT1G59990.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:22090369-22092885 REVERSE LENGTH=581
Length = 581
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 112/235 (47%), Gaps = 34/235 (14%)
Query: 181 TFEDCGFPPPVMSAIKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLPMIV 240
+++ G V A++ G+++P+ Q +P +LSG+D+I A+TGSGKT ++ P+I
Sbjct: 81 SWKSLGLSDNVSIALRDSGFDRPSLTQAVCIPSILSGKDVIVAAETGSGKTHGYLAPIID 140
Query: 241 HI----MDQPELQKEEGP-----IGVICAPTRELAQQIYLESKKFAKSYG---IRVSAVY 288
+ +D +EE P I +I P L +Q+ G +RV AV
Sbjct: 141 QLTNTALDSEVTNREERPFPLKNISLILCPNVMLCEQVVRMVNGLVDEDGNPLLRVEAVC 200
Query: 289 GGMSKLEQFKELKAGCEIVVATPGRLIDML---KMKALTMTRAT-YLVLDEADRMFDLGF 344
G ++ +I+V+TP L++ + + + L R Y+V DEAD + F
Sbjct: 201 GSQGWPDRLP------DIIVSTPAALLNNIEPKRNRRLEFLRCVKYVVFDEADMLLCGSF 254
Query: 345 EPQVRSIVGQIRPDRQTSLFSATMPRKVEKLAREILSDPVRV--IVGEVGMANED 397
+ Q+ ++ +R D ++V +LA+ L P+ + V ++ + NED
Sbjct: 255 QNQIIRLINMLRFDE----------KQVSRLAKSNLGRPMEIDASVPQIDLENED 299
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 63/129 (48%), Gaps = 7/129 (5%)
Query: 428 TLVFASKKATVDDIETQLSQRGFKVAALHGDKDQASRMDILQKFKS--GVYHVLIATDVA 485
T+VFA+ V+ + L + + H + R +IL F+ GV+ + TD A
Sbjct: 427 TMVFANTVEAVEAVADILEKASIQCYRYHKNHKLDERANILADFRETGGVF---VCTDAA 483
Query: 486 ARGLDIKSIKTVVNFDIAKDMDMHVHRIGRTGRAGDKEGVAYTLITQKEARFAGELVNSL 545
ARG+D+ ++ V+ D A +HRIGRT RAG + G +L T+ R E +
Sbjct: 484 ARGVDVPNVSHVIQADFASSAVDFLHRIGRTARAG-QYGTVTSLYTEAN-RDLVEAIREA 541
Query: 546 IAAGQNVST 554
+ GQ V T
Sbjct: 542 VKMGQPVET 550
>AT2G28600.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:12251845-12254672
FORWARD LENGTH=502
Length = 502
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 136/318 (42%), Gaps = 24/318 (7%)
Query: 254 PIGVICAPTRELAQQIYLESKKFAKSYGIRVSAVYGGMSKLEQFKELKA-GCEIVVATPG 312
P + P++ A Q+ K K GI +++ G Q LK+ E +VATP
Sbjct: 197 PFLLYLVPSQSKASQVRSVCKAL-KGIGIHTVSLHQGAPLDHQISGLKSVEPEFIVATPE 255
Query: 313 RLIDMLKMKALTMTRATYLVLDEADRMFDLGFEPQVRSIVGQIRPDRQTSLFSATMPRKV 372
RL++++ +K + ++ + LV+DE + G+ V+SI I QT +F+ + +
Sbjct: 256 RLLEIVTLKGVDISNVSLLVIDELGSLCSGGYLNAVKSIKQAISSKHQTIVFNNSFSASI 315
Query: 373 EKLAREILSDPV-RVIVGE-VGMANEDITQVVQVVPSDSXXXXXXXXXXXXTIDQGDTLV 430
+ L V RV V E V ITQ V V S+ + +
Sbjct: 316 IPAVQSFLGGSVNRVTVNESVASQGSCITQTVSVCASEEKKLQKFAKHLDSS--SSKLIY 373
Query: 431 FASKKATVDDIETQLSQRGFKVAALHGDKDQASRMDILQKFKSGVYHVLIATDVAARGLD 490
+K+ + I L +G V+ S++ ++K + V H+ + LD
Sbjct: 374 IVTKEESFKKIMAILKLKGISVST-----SSDSKLSEVKKSRKPVAHL-----IDFEQLD 423
Query: 491 ---IKSIKTVVNFDIAKDMDMHVHRIGRTGRAGDKEGVAYTLITQKEARF--AGELVNSL 545
++ +TV+ D ++++ + R GV ++ IT+K+A AG LVN L
Sbjct: 424 TTVMRDSETVLLPDFFPSIEIYTQILTSMARES-AHGVLHSYITEKDAASYQAGPLVNVL 482
Query: 546 IAAGQNVSTEL--MDLAM 561
GQNV MD+AM
Sbjct: 483 ENCGQNVPDRWRNMDVAM 500
>AT4G35740.1 | Symbols: RecQl3, ATRECQ3 | DEAD/DEAH box RNA helicase
family protein | chr4:16936233-16940172 FORWARD
LENGTH=713
Length = 713
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 75/331 (22%), Positives = 126/331 (38%), Gaps = 41/331 (12%)
Query: 207 QCQALPVVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELQKEEGPIGVICAPTRELA 266
Q +A+ V+SGRD + TG GK+ + +P + + I ++ +P L
Sbjct: 41 QLEAIQAVVSGRDCFCLMPTGGGKSICYQIPALA-----------KPGIVLVVSPLIALM 89
Query: 267 --QQIYLESKKFAKSYGIRVSAVYGGMSKLEQFKELKAGCEIVVATPGRLID---MLKMK 321
Q + L+ K A Y A + E K ++ TP + MLK++
Sbjct: 90 ENQVMALKEKGIAAEYLSSTQATHVKNKIHEDLDSGKPSVRLLYVTPELIATKGFMLKLR 149
Query: 322 ALTMTRATYLV-LDEADRMFDLG--FEPQVR--SIVGQIRPDRQTSLFSATMPRKVEKLA 376
L L+ +DEA + G F P R S + D +AT KV+K
Sbjct: 150 KLHSRGLLNLIAIDEAHCISSWGHDFRPSYRQLSTLRDSLADVPVLALTATAAPKVQK-- 207
Query: 377 REILSDPVRVIVGEVGMANEDITQVVQVVPSDSXXXXXXXXXXXXTIDQGDTL------- 429
++ + + N + + P+ D G+ L
Sbjct: 208 ---------DVIDSLNLRNPLVLKSSFNRPNIFYEVRYKDLLDNAYTDLGNLLKSCGNIC 258
Query: 430 --VFASKKATVDDIETQLSQRGFKVAALHGDKDQASRMDILQKFKSGVYHVLIATDVAAR 487
++ ++ T DD+ LS G AA H + R +L + S +++AT
Sbjct: 259 AIIYCLERTTCDDLSVHLSSIGISSAAYHAGLNSKMRSTVLDDWLSSKKQIIVATVAFGM 318
Query: 488 GLDIKSIKTVVNFDIAKDMDMHVHRIGRTGR 518
G+D K ++ V +F+I K M+ GR GR
Sbjct: 319 GIDKKDVRMVCHFNIPKSMESFYQESGRAGR 349
>AT5G19210.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:6462100-6463687
FORWARD LENGTH=315
Length = 315
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 118/272 (43%), Gaps = 41/272 (15%)
Query: 306 IVVATPGRLIDMLKMKALTMTRATYLVLDEADRMF----DLGFEPQVRSIVGQIRP--DR 359
I+VAT L ML+ + LV+DE D +F +G VR ++ R
Sbjct: 46 ILVATVASLCHMLEKHIFRIDSVRVLVVDEVDFLFYSSKQVG---SVRKLLTSFSSCDKR 102
Query: 360 QTSLFSATMPRKVEKLAREILSDPVRVIVGEVGMANEDITQVV--------QVVPSDSXX 411
QT SA++P+ + + D ++ + + + ++ ++ + V +
Sbjct: 103 QTVFASASIPQH-----KHFVHDCIQQKWTKRDVVHVHVSAIMPMPLCLLHRFVMCEKTN 157
Query: 412 XXXXXXXXXXTIDQGDTLVFA------SKKATVDDIETQL------SQRG-FKVAALHGD 458
+ ++F SKKA D T L S +G ++ L GD
Sbjct: 158 KHQVLLALLESDAPESAIIFVGEQSEKSKKAGNDPSTTLLMEFLKTSYKGSLEILLLEGD 217
Query: 459 KDQASRMDILQKFKSGVYHVLIATDVAARGLDIKSIKTVVNFDIAKDMDMHVHRIGRTGR 518
+ SR L + + G +L++TD+AARG+D+ + NFD+ + + ++HR GR GR
Sbjct: 218 MNFNSRAASLTEIRQGGGFLLVSTDIAARGIDLPETTHIFNFDLPQTVTDYLHRAGRAGR 277
Query: 519 A--GDKEGVAYTLITQKE----ARFAGELVNS 544
D++ + LIT +E R+ EL+ S
Sbjct: 278 KPFSDRKCIVANLITSEERFVLQRYENELMFS 309
>AT4G35740.2 | Symbols: RecQl3, ATRECQ3 | DEAD/DEAH box RNA helicase
family protein | chr4:16936788-16940172 FORWARD
LENGTH=620
Length = 620
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 44/90 (48%)
Query: 429 LVFASKKATVDDIETQLSQRGFKVAALHGDKDQASRMDILQKFKSGVYHVLIATDVAARG 488
+++ ++ T DD+ LS G AA H + R +L + S +++AT G
Sbjct: 167 IIYCLERTTCDDLSVHLSSIGISSAAYHAGLNSKMRSTVLDDWLSSKKQIIVATVAFGMG 226
Query: 489 LDIKSIKTVVNFDIAKDMDMHVHRIGRTGR 518
+D K ++ V +F+I K M+ GR GR
Sbjct: 227 IDKKDVRMVCHFNIPKSMESFYQESGRAGR 256
>AT1G35530.2 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr1:13089994-13097078 FORWARD LENGTH=1390
Length = 1390
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 54/104 (51%), Gaps = 12/104 (11%)
Query: 429 LVFASKKATVDDIETQLSQRGFKVAA-----------LHGDKDQASRMDILQKFKSGVYH 477
++F++ + +V DI LS G V A L G + Q + +L+KF++G ++
Sbjct: 471 IIFSNFRGSVRDIMNALSNIGDMVKATEFIGQSSGKTLKG-QSQKIQQAVLEKFRAGGFN 529
Query: 478 VLIATDVAARGLDIKSIKTVVNFDIAKDMDMHVHRIGRTGRAGD 521
V++AT + GLDI + V+ FD + R+GRTGR +
Sbjct: 530 VIVATSIGEEGLDIMEVDLVICFDANVSPLRMIQRMGRTGRKNN 573
>AT1G35530.1 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr1:13089994-13097078 FORWARD LENGTH=1324
Length = 1324
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 54/104 (51%), Gaps = 12/104 (11%)
Query: 429 LVFASKKATVDDIETQLSQRGFKVAA-----------LHGDKDQASRMDILQKFKSGVYH 477
++F++ + +V DI LS G V A L G + Q + +L+KF++G ++
Sbjct: 471 IIFSNFRGSVRDIMNALSNIGDMVKATEFIGQSSGKTLKG-QSQKIQQAVLEKFRAGGFN 529
Query: 478 VLIATDVAARGLDIKSIKTVVNFDIAKDMDMHVHRIGRTGRAGD 521
V++AT + GLDI + V+ FD + R+GRTGR +
Sbjct: 530 VIVATSIGEEGLDIMEVDLVICFDANVSPLRMIQRMGRTGRKNN 573