Miyakogusa Predicted Gene
- Lj1g3v4834030.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v4834030.1 tr|G7ICV1|G7ICV1_MEDTR ATP-dependent RNA
helicase-like protein OS=Medicago truncatula
GN=MTR_1g08664,95.35,0,helicase superfamily c-terminal
domain,Helicase, C-terminal; Helicase associated domain (HA2) Add
a,CUFF.33570.1
(559 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G47250.1 | Symbols: | RNA helicase family protein | chr2:193... 1030 0.0
AT3G62310.1 | Symbols: | RNA helicase family protein | chr3:230... 1022 0.0
AT3G26560.1 | Symbols: | ATP-dependent RNA helicase, putative |... 576 e-164
AT1G32490.2 | Symbols: ESP3 | RNA helicase family protein | chr1... 569 e-162
AT1G32490.1 | Symbols: EMB2733, ESP3 | RNA helicase family prote... 569 e-162
AT2G35340.1 | Symbols: MEE29 | helicase domain-containing protei... 558 e-159
AT5G13010.1 | Symbols: EMB3011 | RNA helicase family protein | c... 488 e-138
AT4G18465.1 | Symbols: | RNA helicase family protein | chr4:101... 475 e-134
AT5G14900.1 | Symbols: | helicase associated (HA2) domain-conta... 452 e-127
AT1G26370.1 | Symbols: | RNA helicase family protein | chr1:912... 425 e-119
AT1G27900.1 | Symbols: | RNA helicase family protein | chr1:971... 400 e-111
AT4G16680.1 | Symbols: | P-loop containing nucleoside triphosph... 353 1e-97
AT5G10370.1 | Symbols: | helicase domain-containing protein / I... 255 5e-68
AT4G01020.1 | Symbols: | helicase domain-containing protein / I... 252 6e-67
AT1G48650.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 232 5e-61
AT1G48650.2 | Symbols: | DEA(D/H)-box RNA helicase family prote... 232 6e-61
AT2G35920.1 | Symbols: | RNA helicase family protein | chr2:150... 219 5e-57
AT2G01130.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 202 5e-52
AT1G33390.1 | Symbols: ATFAS4, FAS4 | RNA helicase family protei... 190 2e-48
AT1G58060.1 | Symbols: | RNA helicase family protein | chr1:214... 174 2e-43
AT5G04895.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 172 4e-43
AT1G58050.1 | Symbols: | RNA helicase family protein | chr1:214... 165 9e-41
AT2G30800.1 | Symbols: HVT1, ATVT-1 | helicase in vascular tissu... 158 1e-38
AT1G06670.1 | Symbols: NIH | nuclear DEIH-boxhelicase | chr1:204... 149 6e-36
AT2G47680.1 | Symbols: | zinc finger (CCCH type) helicase famil... 98 1e-20
>AT2G47250.1 | Symbols: | RNA helicase family protein |
chr2:19399923-19402981 REVERSE LENGTH=729
Length = 729
Score = 1030 bits (2662), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 489/537 (91%), Positives = 510/537 (94%)
Query: 1 MLLREAMTDPLLERYKVIILDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEK 60
MLLREAM DPLLERYKVIILDEAHERTLATDVLFGLLKEVL+NRPDLKLVVMSATLEAEK
Sbjct: 171 MLLREAMADPLLERYKVIILDEAHERTLATDVLFGLLKEVLRNRPDLKLVVMSATLEAEK 230
Query: 61 FQGYFFGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHTCEPPGDILVFLTGEE 120
FQ YF GAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIH CEPPGDILVFLTGEE
Sbjct: 231 FQEYFSGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPPGDILVFLTGEE 290
Query: 121 EIEDACRKISKEVSNLGDQVGAVKAVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVV 180
EIEDACRKI+KEVSNLGDQVG VK VPLYSTLPPAMQQKIF+ RKIVV
Sbjct: 291 EIEDACRKINKEVSNLGDQVGPVKVVPLYSTLPPAMQQKIFDPAPVPLTEGGPAGRKIVV 350
Query: 181 STNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPG 240
STNIAETSLTIDGIVYVIDPGFAKQKVYNPR+RVESLLVSPISKASAHQRSGRAGRT+PG
Sbjct: 351 STNIAETSLTIDGIVYVIDPGFAKQKVYNPRIRVESLLVSPISKASAHQRSGRAGRTRPG 410
Query: 241 KCFRLYTERSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRA 300
KCFRLYTE+SFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRA
Sbjct: 411 KCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRA 470
Query: 301 LEVLNYLGALDDEGNLTKLGEIMSEFPLDPLMSKMLVVSPEFNCSNEMLSIAAMLSVPNC 360
LEVLNYLGALDDEGNLTK GEIMSEFPLDP MSKML+VSPEFNCSNE+LS++AMLSVPNC
Sbjct: 471 LEVLNYLGALDDEGNLTKTGEIMSEFPLDPQMSKMLIVSPEFNCSNEILSVSAMLSVPNC 530
Query: 361 FVRPREAQKAADEAKATFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALKSADN 420
FVRPREAQKAADEAKA FGHIDGDHLTLLNVYHAYKQNNEDP+WC++NFVN+RA+KSADN
Sbjct: 531 FVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPNWCFENFVNNRAMKSADN 590
Query: 421 VRQQLLRIMGRFNLKLCSTDFNSRDYYVNIRKAMLSGYFMQVAHLERTGHYLTVKDNQVV 480
VRQQL+RIM RFNLK+CSTDFNSRDYYVNIRKAML+GYFMQVAHLERTGHYLTVKDNQVV
Sbjct: 591 VRQQLVRIMSRFNLKMCSTDFNSRDYYVNIRKAMLAGYFMQVAHLERTGHYLTVKDNQVV 650
Query: 481 HLHPSTCLDHKPEWVIYNEYVLTSRNFIRTVTDIRGEWLVDIAPHYYDLTNFPQGEA 537
HLHPS CLDHKPEWVIYNEYVLT+RNFIRTVTDIRGEWLVD+A HYYDL+NFP EA
Sbjct: 651 HLHPSNCLDHKPEWVIYNEYVLTTRNFIRTVTDIRGEWLVDVAQHYYDLSNFPNCEA 707
>AT3G62310.1 | Symbols: | RNA helicase family protein |
chr3:23057516-23060561 REVERSE LENGTH=726
Length = 726
Score = 1022 bits (2642), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 483/537 (89%), Positives = 509/537 (94%)
Query: 1 MLLREAMTDPLLERYKVIILDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEK 60
MLLREAM DPLLERYKVIILDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEK
Sbjct: 167 MLLREAMADPLLERYKVIILDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEK 226
Query: 61 FQGYFFGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHTCEPPGDILVFLTGEE 120
FQ YF GAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIH CEPPGDILVFLTGEE
Sbjct: 227 FQDYFSGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPPGDILVFLTGEE 286
Query: 121 EIEDACRKISKEVSNLGDQVGAVKAVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVV 180
EIEDACRKI+KEV NLGDQVG +K VPLYSTLPPAMQQKIF+ RKIVV
Sbjct: 287 EIEDACRKINKEVGNLGDQVGPIKVVPLYSTLPPAMQQKIFDPAPEPVTEGGPPGRKIVV 346
Query: 181 STNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPG 240
STNIAETSLTIDGIVYVIDPGFAKQKVYNPR+RVESLLVSPISKASAHQRSGRAGRT+PG
Sbjct: 347 STNIAETSLTIDGIVYVIDPGFAKQKVYNPRIRVESLLVSPISKASAHQRSGRAGRTRPG 406
Query: 241 KCFRLYTERSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRA 300
KCFRLYTE+SFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRA
Sbjct: 407 KCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRA 466
Query: 301 LEVLNYLGALDDEGNLTKLGEIMSEFPLDPLMSKMLVVSPEFNCSNEMLSIAAMLSVPNC 360
LEVLNYLGALDD+GNLTK GEIMSEFPLDP M+KML+VSPEFNCSNE+LS++AMLSVPNC
Sbjct: 467 LEVLNYLGALDDDGNLTKTGEIMSEFPLDPQMAKMLIVSPEFNCSNEILSVSAMLSVPNC 526
Query: 361 FVRPREAQKAADEAKATFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALKSADN 420
F+RPREAQKAADEAKA FGHI+GDHLTLLNVYHA+KQNNEDP+WCY+NF+N+RA+KSADN
Sbjct: 527 FIRPREAQKAADEAKARFGHIEGDHLTLLNVYHAFKQNNEDPNWCYENFINNRAMKSADN 586
Query: 421 VRQQLLRIMGRFNLKLCSTDFNSRDYYVNIRKAMLSGYFMQVAHLERTGHYLTVKDNQVV 480
VRQQL+RIM RFNLK+CSTDFNSRDYY+NIRKAML+GYFMQVAHLERTGHYLTVKDNQVV
Sbjct: 587 VRQQLVRIMSRFNLKMCSTDFNSRDYYINIRKAMLAGYFMQVAHLERTGHYLTVKDNQVV 646
Query: 481 HLHPSTCLDHKPEWVIYNEYVLTSRNFIRTVTDIRGEWLVDIAPHYYDLTNFPQGEA 537
HLHPS CLDHKPEWVIYNEYVLTSRNFIRTVTDIRGEWLVD+A HYYDL+NFP EA
Sbjct: 647 HLHPSNCLDHKPEWVIYNEYVLTSRNFIRTVTDIRGEWLVDVASHYYDLSNFPNCEA 703
>AT3G26560.1 | Symbols: | ATP-dependent RNA helicase, putative |
chr3:9750122-9753719 REVERSE LENGTH=1168
Length = 1168
Score = 576 bits (1484), Expect = e-164, Method: Compositional matrix adjust.
Identities = 277/532 (52%), Positives = 381/532 (71%), Gaps = 12/532 (2%)
Query: 1 MLLREAMTDPLLERYKVIILDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEK 60
MLLRE + D L +Y VI+LDEAHERT+ TDVLFGLLK+++K R DL+L+V SATL+AEK
Sbjct: 615 MLLREILIDENLSQYSVIMLDEAHERTIHTDVLFGLLKKLMKRRLDLRLIVTSATLDAEK 674
Query: 61 FQGYFFGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHTCEPPGDILVFLTGEE 120
F GYFF + +PGR PVEI YT++PE DYL+AA+ TV+QIH EP GDILVFLTG+E
Sbjct: 675 FSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPEGDILVFLTGQE 734
Query: 121 EIEDACRKISKEVSNLGDQVGAVKAVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVV 180
EI+ AC+ + + + LG V + +P+YS LP MQ +IF+ RK+VV
Sbjct: 735 EIDSACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPPPPGK-------RKVVV 787
Query: 181 STNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPG 240
+TNIAE SLTIDGI YV+DPGFAKQ VYNP+ +ESL+++PIS+ASA QR+GRAGRT PG
Sbjct: 788 ATNIAEASLTIDGIYYVVDPGFAKQNVYNPKQGLESLVITPISQASAKQRAGRAGRTGPG 847
Query: 241 KCFRLYTERSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRA 300
KC+RLYTE ++ N++ P + PEI R NL T LT+K +GI+DL+ FDFMDPP P+ L+ A
Sbjct: 848 KCYRLYTESAYRNEMPPTSIPEIQRINLGMTTLTMKAMGINDLLSFDFMDPPQPQALISA 907
Query: 301 LEVLNYLGALDDEGNLTKLGEIMSEFPLDPLMSKMLVVSPEFNCSNEMLSIAAMLSVPNC 360
+E L LGALD+EG LTKLG M+EFPL+P +SKML+ S + CS+E+L++ AM+ N
Sbjct: 908 MEQLYSLGALDEEGLLTKLGRKMAEFPLEPPLSKMLLASVDLGCSDEILTMIAMIQTGNI 967
Query: 361 FVRPREAQKAADEAKATFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALKSADN 420
F RPRE Q AD+ +A F +GDHLTLL VY A+K N WC++NF+ R+L+ A +
Sbjct: 968 FYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFIQSRSLRRAQD 1027
Query: 421 VRQQLLRIMGRFNLKLCSTDFNSRDYYVNIRKAMLSGYFMQVAHLERTGHYLTVKDNQVV 480
VR+QLL IM ++ L + + N + IRKA+ +G+F A + Y T+ +NQ V
Sbjct: 1028 VRKQLLSIMDKYKLDVVTAGKN----FTKIRKAITAGFFFHGARKDPQEGYRTLVENQPV 1083
Query: 481 HLHPSTCL-DHKPEWVIYNEYVLTSRNFIRTVTDIRGEWLVDIAPHYYDLTN 531
++HPS+ L +P+WVIY++ V+T++ ++R VT I +WLV++AP ++ +++
Sbjct: 1084 YIHPSSALFQRQPDWVIYHDLVMTTKEYMREVTVIDPKWLVELAPRFFKVSD 1135
>AT1G32490.2 | Symbols: ESP3 | RNA helicase family protein |
chr1:11742356-11749286 REVERSE LENGTH=1034
Length = 1034
Score = 569 bits (1467), Expect = e-162, Method: Compositional matrix adjust.
Identities = 276/535 (51%), Positives = 385/535 (71%), Gaps = 16/535 (2%)
Query: 1 MLLREAMTDPLLERYKVIILDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEK 60
MLLRE + +P L Y V+I+DEAHERTL+TD+LFGL+K++ + RPDLKL++ SAT++AEK
Sbjct: 494 MLLRELLGEPDLASYSVVIVDEAHERTLSTDILFGLVKDIARFRPDLKLLISSATMDAEK 553
Query: 61 FQGYFFGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHTCEPPGDILVFLTGEE 120
F YF AP+ PGR +PVEI YT PE DY++AAI T++ IH EP GDILVF TG+E
Sbjct: 554 FSDYFDTAPIFSFPGRRYPVEINYTSAPEADYMDAAIVTILTIHVREPLGDILVFFTGQE 613
Query: 121 EIEDACRKISKEVSNLGDQVGAVKAVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVV 180
EIE A + + LG ++ + P+Y+ LP +Q KIFE RK+V+
Sbjct: 614 EIETAEEILKHRIRGLGTKIRELIICPIYANLPSELQAKIFEPTPEGA-------RKVVL 666
Query: 181 STNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPG 240
+TNIAETSLTIDGI YV+DPGF+K K YNPR +ESLL++PISKASA QR+GRAGRT PG
Sbjct: 667 ATNIAETSLTIDGIKYVVDPGFSKMKSYNPRTGMESLLITPISKASATQRAGRAGRTSPG 726
Query: 241 KCFRLYTERSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRA 300
KC+RLYT ++NNDL+ T PE+ R+NLA+ VL LK LGI DL++FDFMDPP E L+++
Sbjct: 727 KCYRLYTAFNYNNDLEENTVPEVQRTNLASVVLALKSLGIHDLINFDFMDPPPAEALVKS 786
Query: 301 LEVLNYLGALDDEGNLTKLGEIMSEFPLDPLMSKMLVVSPEFNCSNEMLSIAAMLSV-PN 359
LE+L LGAL+ G LTK G M+EFPLDP++SKM+VVS ++ CS+E++SIAAMLS+ +
Sbjct: 787 LELLFALGALNKLGELTKAGRRMAEFPLDPMLSKMIVVSDKYKCSDEIISIAAMLSIGGS 846
Query: 360 CFVRPREAQKAADEAKATF--GHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALKS 417
F RP++ Q AD A+ F G++ GDH+ LL VY ++K+ N WCY+N++ R++K
Sbjct: 847 IFYRPKDKQVHADNARMNFHTGNV-GDHIALLKVYSSWKETNFSTQWCYENYIQVRSMKR 905
Query: 418 ADNVRQQLLRIMGRFNLKLCSTDFNSRDYYVNIRKAMLSGYFMQVAHLERTGHYLTVKDN 477
A ++R QL ++ R + + S++ N D ++RK++++G+F A L++ G Y TVK
Sbjct: 906 ARDIRDQLEGLLERVEIDI-SSNLNELD---SVRKSIVAGFFPHTAKLQKNGSYRTVKHP 961
Query: 478 QVVHLHPSTCLDHK-PEWVIYNEYVLTSRNFIRTVTDIRGEWLVDIAPHYYDLTN 531
Q VH+HP++ L P WV+Y+E VLTS+ ++R VT+++ EWL+++APHYY L +
Sbjct: 962 QTVHIHPNSGLSQVLPRWVVYHELVLTSKEYMRQVTELKPEWLIELAPHYYQLKD 1016
>AT1G32490.1 | Symbols: EMB2733, ESP3 | RNA helicase family protein |
chr1:11742356-11749286 REVERSE LENGTH=1044
Length = 1044
Score = 569 bits (1466), Expect = e-162, Method: Compositional matrix adjust.
Identities = 276/535 (51%), Positives = 385/535 (71%), Gaps = 16/535 (2%)
Query: 1 MLLREAMTDPLLERYKVIILDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEK 60
MLLRE + +P L Y V+I+DEAHERTL+TD+LFGL+K++ + RPDLKL++ SAT++AEK
Sbjct: 504 MLLRELLGEPDLASYSVVIVDEAHERTLSTDILFGLVKDIARFRPDLKLLISSATMDAEK 563
Query: 61 FQGYFFGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHTCEPPGDILVFLTGEE 120
F YF AP+ PGR +PVEI YT PE DY++AAI T++ IH EP GDILVF TG+E
Sbjct: 564 FSDYFDTAPIFSFPGRRYPVEINYTSAPEADYMDAAIVTILTIHVREPLGDILVFFTGQE 623
Query: 121 EIEDACRKISKEVSNLGDQVGAVKAVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVV 180
EIE A + + LG ++ + P+Y+ LP +Q KIFE RK+V+
Sbjct: 624 EIETAEEILKHRIRGLGTKIRELIICPIYANLPSELQAKIFEPTPEGA-------RKVVL 676
Query: 181 STNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPG 240
+TNIAETSLTIDGI YV+DPGF+K K YNPR +ESLL++PISKASA QR+GRAGRT PG
Sbjct: 677 ATNIAETSLTIDGIKYVVDPGFSKMKSYNPRTGMESLLITPISKASATQRAGRAGRTSPG 736
Query: 241 KCFRLYTERSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRA 300
KC+RLYT ++NNDL+ T PE+ R+NLA+ VL LK LGI DL++FDFMDPP E L+++
Sbjct: 737 KCYRLYTAFNYNNDLEENTVPEVQRTNLASVVLALKSLGIHDLINFDFMDPPPAEALVKS 796
Query: 301 LEVLNYLGALDDEGNLTKLGEIMSEFPLDPLMSKMLVVSPEFNCSNEMLSIAAMLSV-PN 359
LE+L LGAL+ G LTK G M+EFPLDP++SKM+VVS ++ CS+E++SIAAMLS+ +
Sbjct: 797 LELLFALGALNKLGELTKAGRRMAEFPLDPMLSKMIVVSDKYKCSDEIISIAAMLSIGGS 856
Query: 360 CFVRPREAQKAADEAKATF--GHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALKS 417
F RP++ Q AD A+ F G++ GDH+ LL VY ++K+ N WCY+N++ R++K
Sbjct: 857 IFYRPKDKQVHADNARMNFHTGNV-GDHIALLKVYSSWKETNFSTQWCYENYIQVRSMKR 915
Query: 418 ADNVRQQLLRIMGRFNLKLCSTDFNSRDYYVNIRKAMLSGYFMQVAHLERTGHYLTVKDN 477
A ++R QL ++ R + + S++ N D ++RK++++G+F A L++ G Y TVK
Sbjct: 916 ARDIRDQLEGLLERVEIDI-SSNLNELD---SVRKSIVAGFFPHTAKLQKNGSYRTVKHP 971
Query: 478 QVVHLHPSTCLDHK-PEWVIYNEYVLTSRNFIRTVTDIRGEWLVDIAPHYYDLTN 531
Q VH+HP++ L P WV+Y+E VLTS+ ++R VT+++ EWL+++APHYY L +
Sbjct: 972 QTVHIHPNSGLSQVLPRWVVYHELVLTSKEYMRQVTELKPEWLIELAPHYYQLKD 1026
>AT2G35340.1 | Symbols: MEE29 | helicase domain-containing protein |
chr2:14872728-14879615 FORWARD LENGTH=1044
Length = 1044
Score = 558 bits (1439), Expect = e-159, Method: Compositional matrix adjust.
Identities = 273/535 (51%), Positives = 385/535 (71%), Gaps = 16/535 (2%)
Query: 1 MLLREAMTDPLLERYKVIILDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEK 60
MLLRE + +P L Y VII+DEAHERTL TD+LFGL+K++ + RPDLKL++ SAT++AEK
Sbjct: 504 MLLRELLGEPDLGSYSVIIVDEAHERTLRTDILFGLVKDIARARPDLKLLISSATMDAEK 563
Query: 61 FQGYFFGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHTCEPPGDILVFLTGEE 120
F +F AP+ + PGR +PV+I +T PE DY++AAI TV+ IH EP GD+LVFL G+E
Sbjct: 564 FSDFFDQAPIFRFPGRRYPVDICFTTAPEADYMDAAITTVLTIHVKEPLGDVLVFLPGQE 623
Query: 121 EIEDACRKISKEVSNLGDQVGAVKAVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVV 180
EIE + ++ LG ++ + P+Y+ LP +Q KIFE RK+V+
Sbjct: 624 EIEAVEENLKHKIRGLGTKIRELIICPIYANLPSELQAKIFEPTPEGA-------RKVVL 676
Query: 181 STNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPG 240
+TNIAETSLTIDGI YV+DPGF+K K YNPR +ESLLV+PISKASA QR+GRAGRT PG
Sbjct: 677 ATNIAETSLTIDGIKYVVDPGFSKMKSYNPRTGMESLLVTPISKASATQRTGRAGRTSPG 736
Query: 241 KCFRLYTERSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRA 300
KC+RLYT ++ NDL+ T PEI R+NLA+ VL+LK LGI +L++FDFMDPP E L+++
Sbjct: 737 KCYRLYTAFNYYNDLEDNTVPEIQRTNLASVVLSLKSLGIHNLLNFDFMDPPPSEALIKS 796
Query: 301 LEVLNYLGALDDEGNLTKLGEIMSEFPLDPLMSKMLVVSPEFNCSNEMLSIAAMLSV-PN 359
LE+L LGAL+ G LTK G M+EFPLDP++SKM+VVS ++ CS+E++SIAAMLS+ P+
Sbjct: 797 LELLFALGALNQLGELTKAGRRMAEFPLDPMLSKMIVVSDKYKCSDEIISIAAMLSIGPS 856
Query: 360 CFVRPREAQKAADEAKATF--GHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALKS 417
F RP++ Q AD A F G++ GDH+ L +Y+++K+ N WCY+N++ R++K
Sbjct: 857 IFYRPKDKQVHADNAMKNFHVGNV-GDHIAFLKIYNSWKETNYSTQWCYENYIQVRSMKR 915
Query: 418 ADNVRQQLLRIMGRFNLKLCSTDFNSRDYYVNIRKAMLSGYFMQVAHLERTGHYLTVKDN 477
A ++R QL ++ R + + S++ N D +IRK++++G+F A L++ G Y TVK
Sbjct: 916 ARDIRDQLEGLLERVEIDV-SSNANELD---SIRKSIVAGFFPHTAKLQKNGSYRTVKHP 971
Query: 478 QVVHLHPSTCLDHK-PEWVIYNEYVLTSRNFIRTVTDIRGEWLVDIAPHYYDLTN 531
Q VH+HP++ L P WV+Y++ VLTS+ ++R VT+++ EWL++IAPHYY L +
Sbjct: 972 QTVHIHPASGLSQVLPRWVVYHQLVLTSKEYMRQVTELKPEWLIEIAPHYYQLKD 1026
>AT5G13010.1 | Symbols: EMB3011 | RNA helicase family protein |
chr5:4122747-4128660 FORWARD LENGTH=1255
Length = 1255
Score = 488 bits (1257), Expect = e-138, Method: Compositional matrix adjust.
Identities = 237/540 (43%), Positives = 356/540 (65%), Gaps = 22/540 (4%)
Query: 1 MLLREAMTDPLLERYKVIILDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEK 60
+LLRE + D L++Y+V+++DEAHER+L TDVLFG+LK+V+ R D KL+V SATL A+K
Sbjct: 658 VLLRETLKDSDLDKYRVVVMDEAHERSLNTDVLFGILKKVVARRRDFKLIVTSATLNAQK 717
Query: 61 FQGYFFGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHTCEPPGDILVFLTGEE 120
F +F P+ +PGR PV I Y++ P DY+EAA++ + IH PPGDIL+F+TG++
Sbjct: 718 FSNFFGSVPIFNIPGRTFPVNILYSKTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQD 777
Query: 121 EIEDAC----RKISKEVSNLGDQVGAVKAVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXR 176
EIE AC ++ + VS+ ++ + +P+YS LP +Q KIF+ R
Sbjct: 778 EIEAACFSLKERMEQLVSSSSREITNLLILPIYSQLPADLQAKIFQKPEDGA-------R 830
Query: 177 KIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGR 236
K +V+TNIAETSLT+DGI YVID G+ K KV+NPR+ +++L V PIS+A++ QR+GRAGR
Sbjct: 831 KCIVATNIAETSLTVDGIYYVIDTGYGKMKVFNPRMGMDALQVFPISRAASDQRAGRAGR 890
Query: 237 TQPGKCFRLYTERSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPET 296
T PG C+RLYTE ++ N++ P PEI R+NL N VL LK L ID+L+ FDFMDPP E
Sbjct: 891 TGPGTCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVLLLKSLKIDNLLDFDFMDPPPQEN 950
Query: 297 LMRALEVLNYLGALDDEGNLTKLGEIMSEFPLDPLMSKMLVVSPEFNCSNEMLSIAAMLS 356
++ ++ L LGAL++ G LT LG M EFPLDP ++KML++ +C +E+L+I +MLS
Sbjct: 951 ILNSMYQLWVLGALNNVGGLTDLGWKMVEFPLDPPLAKMLLMGERLDCIDEVLTIVSMLS 1010
Query: 357 VPNCFVRPREAQKAADEAKATFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALK 416
VP+ F RP+E + +D A+ F + DHLTLLNVY +K+++ WC D+++ + L+
Sbjct: 1011 VPSVFFRPKERAEESDAAREKFFVPESDHLTLLNVYQQWKEHDYRGDWCNDHYLQVKGLR 1070
Query: 417 SADNVRQQLLRIMGRFNLKL--CSTDFNSRDYYVNIRKAMLSGYFMQVAHLERTGHYLTV 474
A VR QLL I+ + ++L C D++ +RKA+ S YF A L+ G Y+
Sbjct: 1071 KAREVRSQLLDILKQLKIELRSCGPDWDI------VRKAICSAYFHNSARLKGVGEYVNC 1124
Query: 475 KDNQVVHLHPSTC---LDHKPEWVIYNEYVLTSRNFIRTVTDIRGEWLVDIAPHYYDLTN 531
+ HLHPS+ L + P++V+Y+E +LT++ +++ T + WL ++ P ++ + +
Sbjct: 1125 RTGMPCHLHPSSALYGLGYTPDYVVYHELILTTKEYMQCATSVEPHWLAELGPMFFSVKD 1184
>AT4G18465.1 | Symbols: | RNA helicase family protein |
chr4:10197056-10201611 FORWARD LENGTH=695
Length = 695
Score = 475 bits (1223), Expect = e-134, Method: Compositional matrix adjust.
Identities = 242/549 (44%), Positives = 353/549 (64%), Gaps = 32/549 (5%)
Query: 1 MLLREAMTDPLLERYKVIILDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEK 60
+L+RE M DPLL +Y VI++DEAHER+++TD+L GLLK++ + RP+L+L++ SAT+EA+
Sbjct: 150 VLIREMMEDPLLTKYSVIMIDEAHERSISTDILLGLLKKIQRRRPELRLIISSATIEAKT 209
Query: 61 FQGYFFG-----AP------------LMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQI 103
+F AP ++ V GR V+I Y +EP DY+ + + T++ I
Sbjct: 210 MSNFFNSSKKRHAPEGSTPGPKLEPAILSVEGRGFSVKIHYVEEPVSDYIRSVVSTILLI 269
Query: 104 HTCEPPGDILVFLTGEEEIEDACRKISKEVSNLGDQVGAVKAVPLYSTLPPAMQQKIFEX 163
+ EPPGD+LVFLTG+E+IE A + + +E + + +PLYS L + Q+ IF
Sbjct: 270 NEREPPGDVLVFLTGQEDIETAIKLLEEEAHSNQKNSSGLLPLPLYSGLSRSEQELIF-- 327
Query: 164 XXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPIS 223
RK+++STNIAETSLT++G+VYVID GF+KQK YNP +ESL+V+PIS
Sbjct: 328 -----TPTPRGKRKVILSTNIAETSLTLEGVVYVIDSGFSKQKFYNPISDIESLVVAPIS 382
Query: 224 KASAHQRSGRAGRTQPGKCFRLYTERSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDL 283
KASA QRSGRAGR +PGKC+RLYTE F N + + PE+ RSNL +TV+ LK LGID++
Sbjct: 383 KASARQRSGRAGRVRPGKCYRLYTEDYFLNQMPGEGIPEMQRSNLVSTVIQLKALGIDNI 442
Query: 284 VHFDFMDPPAPETLMRALEVLNYLGALDDEGNLTK-LGEIMSEFPLDPLMSKMLVVSPEF 342
+ FD+ PP+ E ++RALEVL L LDD+ LT G ++E PLDP++SKM++ S E
Sbjct: 443 LGFDWPAPPSSEAMIRALEVLYSLQILDDDAKLTSPTGFQVAELPLDPMISKMILASSEL 502
Query: 343 NCSNEMLSIAAMLSVPNCFVRPREAQKAADEAKATFGHIDGDHLTLLNVYHAYKQNNEDP 402
CS+E+++IAA+LSV + ++ R QK DEAK F +GDH+T LNVY + ++ +
Sbjct: 503 GCSHEIITIAAVLSVQSVWIIARGVQKEQDEAKLRFAAAEGDHVTFLNVYKGFLESKKPT 562
Query: 403 SWCYDNFVNHRALKSADNVRQQLLRIMGRFNLKLCSTDFNSRDYYVNIRKAMLSGYFMQV 462
WCY NF+N++++K +R QL RI R + L S D + +RKA+ +G+F
Sbjct: 563 QWCYKNFLNYQSMKKVVEIRDQLKRIARRLGITLKSCDGDME----AVRKAVTAGFFANA 618
Query: 463 AHLE--RTGHYLTVKDNQVVHLHPSTCLDH-KPEWVIYNEYVLTSRNFIRTVTDIRGEWL 519
LE G Y T++ ++ V++HPS+ L P+WV+Y V T R ++R V I WL
Sbjct: 619 CRLEPHSNGVYKTIRGSEEVYIHPSSVLFRVNPKWVVYQSIVSTERQYMRNVVTINPSWL 678
Query: 520 VDIAPHYYD 528
++APH+Y
Sbjct: 679 TEVAPHFYQ 687
>AT5G14900.1 | Symbols: | helicase associated (HA2)
domain-containing protein | chr5:4822676-4823581 REVERSE
LENGTH=301
Length = 301
Score = 452 bits (1164), Expect = e-127, Method: Compositional matrix adjust.
Identities = 209/275 (76%), Positives = 243/275 (88%), Gaps = 3/275 (1%)
Query: 266 SNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDEGNLTKLGEIMSE 325
+NLANTVLTLK L + +LV FD +D PAP+TL RAL+ L +LGALDD+ NLTK GE+MSE
Sbjct: 2 TNLANTVLTLKGLSVKNLVRFDLIDSPAPDTLARALDDLYHLGALDDDCNLTKTGEMMSE 61
Query: 326 FPLDPLMSKMLVVSPEFNCSNEMLSIAAMLSVPNCFVRPR-EAQKAADEAKATFGHIDGD 384
FPLDP M+KML+VSP+FNCSNE+LSI+AMLSVPNCF+RPR EAQKAADEAK++F HIDGD
Sbjct: 62 FPLDPQMAKMLIVSPQFNCSNEILSISAMLSVPNCFIRPRGEAQKAADEAKSSFAHIDGD 121
Query: 385 HLTLLNVYHAYKQNNEDPSWCYDNFVNHRALKSADNVRQQLLRIMGRFNLKLCSTDFNSR 444
HLTLLN++HA+ QNN+DP+WC F+N+RA+KSA +VR+QL+RIM RF +KLCS DFNSR
Sbjct: 122 HLTLLNLFHAFLQNNQDPNWCCTKFINYRAMKSAVSVREQLVRIMLRFQIKLCSPDFNSR 181
Query: 445 DYYVNIRKAMLSGYFMQVAHLERTGHYLTV--KDNQVVHLHPSTCLDHKPEWVIYNEYVL 502
DYYVNIRKA+L+GYFMQVAHLERTGHYLT KD+QVVHLHPS CLDHKPEWV+YNEYV
Sbjct: 182 DYYVNIRKALLAGYFMQVAHLERTGHYLTFRDKDDQVVHLHPSNCLDHKPEWVVYNEYVF 241
Query: 503 TSRNFIRTVTDIRGEWLVDIAPHYYDLTNFPQGEA 537
TSRNFIRTVT IRGEWLVD+APHYY L NFP EA
Sbjct: 242 TSRNFIRTVTHIRGEWLVDVAPHYYKLANFPSSEA 276
>AT1G26370.1 | Symbols: | RNA helicase family protein |
chr1:9122030-9125368 REVERSE LENGTH=717
Length = 717
Score = 425 bits (1093), Expect = e-119, Method: Compositional matrix adjust.
Identities = 240/586 (40%), Positives = 339/586 (57%), Gaps = 73/586 (12%)
Query: 1 MLLREAMTDPLLERYKVIILDEAHERTLATDVLFGLLKEVLKNRPD-------------- 46
+LLREA+ DP L RY VII+DEAH+R++ TDVL LLK++ + R
Sbjct: 142 LLLREALLDPHLSRYSVIIVDEAHDRSVHTDVLLALLKKIQRTRSQPVSEKTEFGNVASQ 201
Query: 47 ---------------------------LKLVVMSATLEAEKFQGYFFGAPLMKVPGRLHP 79
LKL++MSA+L+A F YF GA + V GR P
Sbjct: 202 VQTTTRDANGPQQNGVLKGYQGRKLSPLKLIIMSASLDARVFSEYFGGAKAVHVQGRQFP 261
Query: 80 VEIFYTQEPERDYLEAAIRTVVQIHTCEPPGDILVFLTGEEEIEDACRKISKEVSNLGDQ 139
V+I YT PE DY++A + T+ QIH E PGDILVFLTG++EIE R + + + N+ +
Sbjct: 262 VDILYTVHPESDYVDATLVTIFQIHFEEKPGDILVFLTGQDEIESVERLVQERLQNIPED 321
Query: 140 VGAVKAVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVID 199
+ + ++S LP Q K+F RK++++TNIAETS+TI GI YVID
Sbjct: 322 KRKLLPLAIFSALPSEQQMKVF-------APAPTGFRKVILATNIAETSITIPGIRYVID 374
Query: 200 PGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTERSFNNDLQPQT 259
PGF K + Y+P +ESL V P SKA QRSGRAGR PGK FRLY ER F L+ T
Sbjct: 375 PGFVKARSYDPSKGMESLDVVPASKAQTLQRSGRAGREGPGKSFRLYPEREFEK-LEDST 433
Query: 260 YPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDEGNLTK- 318
PEI R NL+N +L LK LGIDD+V FDF+D P+ +++AL L+ LGAL D+G L
Sbjct: 434 KPEIKRCNLSNIILQLKALGIDDIVGFDFIDKPSRGAIIKALAELHSLGALADDGKLENP 493
Query: 319 LGEIMSEFPLDPLMSKMLVVSPEFNCSNEMLSIAAMLSVPNCFVRPREAQKAADEAKATF 378
+G MS PL+P+ SK L+++ +FNC EML A+LSV + F PRE ++ A +K F
Sbjct: 494 VGYQMSRLPLEPVYSKALILANQFNCLEEMLITVAVLSVESIFYDPREKREEARTSKNHF 553
Query: 379 GHIDGDHLTLLNVYH-----------AYKQNNED---PSWCYDNFVNHRALKSADNVRQQ 424
++GDHLT L+VY A NN D WC +N+VN R+LK A ++ +Q
Sbjct: 554 ASVEGDHLTYLSVYRESDEFLEKRKAAGSGNNIDKIMKKWCKENYVNSRSLKHARDIYRQ 613
Query: 425 LLRIMGR--FNLKLCSTDFNSRDYYVNIRKAMLSGYFMQVAHLERTGHYLTVKDNQVVHL 482
+ + + FN+ C D + R+ + + +F++ A + G Y ++ +VVH+
Sbjct: 614 IREHVEQIGFNVSSCGNDM------LAFRRCLAASFFLKAAQRQLDGTYRALESGEVVHI 667
Query: 483 HPSTCL-DHKPEWVIYNEYVLTSRNFIRTVTDIRGEWLVDIAPHYY 527
HP++ L KPE VI+NE + TS+ +I+ +T I WL ++APH++
Sbjct: 668 HPTSVLFRAKPECVIFNELMQTSKKYIKNLTIIDSLWLSELAPHHF 713
>AT1G27900.1 | Symbols: | RNA helicase family protein |
chr1:9715615-9720346 REVERSE LENGTH=700
Length = 700
Score = 400 bits (1027), Expect = e-111, Method: Compositional matrix adjust.
Identities = 214/544 (39%), Positives = 337/544 (61%), Gaps = 30/544 (5%)
Query: 1 MLLREAMTDPLLERYKVIILDEAHERTLATDVLFGLLKEVLKNRP-DLKLVVMSATLEAE 59
+LLRE++++P+L+ Y VIILDEAHER+L TD+L GL+K +++ R + K+++ SATL+ E
Sbjct: 104 VLLRESLSNPMLDDYSVIILDEAHERSLNTDILLGLVKRLVRIRASNFKVLITSATLDGE 163
Query: 60 KFQGYFFGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHTCEPPGDILVFLTGE 119
K +F G P++ VPG+L+PVEI Y++E Y+E++++ + IH EP GDIL+F+TG+
Sbjct: 164 KVSEFFSGCPVLNVPGKLYPVEILYSKERPVSYIESSLKVAIDIHVREPEGDILIFMTGQ 223
Query: 120 EEIEDACRKISKEVSNLGDQVGAVKAV--PLYSTLPPAMQQKIFEXXXXXXXXXXXXXRK 177
++IE ++ ++V +L + + A+ PL+ +LPP MQ ++F R+
Sbjct: 224 DDIEKLVSRLEEKVRSLAEG-SCMDAIIYPLHGSLPPEMQVRVFSPPPPNC-------RR 275
Query: 178 IVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRT 237
+VSTNIAETSLT+DG+VYVID G+ KQ+ YNP + SL V ISK A+QR+GRAGRT
Sbjct: 276 FIVSTNIAETSLTVDGVVYVIDSGYVKQRQYNPSSGMFSLDVIQISKVQANQRAGRAGRT 335
Query: 238 QPGKCFRLYTERSFNNDLQPQTYPEILRSNLANTVLTLKKLGID--DLVHFDFMDPPAPE 295
+PGKC+RLY + +D T PEI R++LA +VL LK L + D++ FDF+D P+ E
Sbjct: 336 RPGKCYRLYPLAVYRDDFLDATIPEIQRTSLAGSVLYLKSLDLPDIDILKFDFLDAPSSE 395
Query: 296 TLMRALEVLNYLGALDDEGNLTKLGEIMSEFPLDPLMSKMLVVSPEFNCSNEMLSIAAML 355
+L AL+ L ++ A+D+ G +T++G MS+ PL+P +S+ L+ + E C ++ L++ AML
Sbjct: 396 SLEDALKQLYFIDAIDENGAITRIGRTMSDLPLEPSLSRTLIEANETGCLSQALTVVAML 455
Query: 356 SVPNCFV----RPREAQKAADE-AKATFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFV 410
S + +P E ++ DE + G GDH+ LL ++ ++ + N DP WC +N +
Sbjct: 456 SAETTLLPARSKPSEKKRKHDEDSNLPNGSGYGDHIQLLQIFESWDRTNYDPVWCKENGM 515
Query: 411 NHRALKSADNVRQQLLRIM-----GRFNLKLCSTDFNSRDYYVNIRKAMLSGYFMQVAH- 464
R + +VR+QL +IM R + +SRD Y +RKA+ G Q+A
Sbjct: 516 QVRGMVFVKDVRRQLCQIMQKISKDRLEVGADGRKSSSRDDYRKLRKALCVGNANQIAER 575
Query: 465 -LERTGHYLTVKDNQVVHLHPSTCLDHK-----PEWVIYNEYVLTSRNFIRTVTDIRGEW 518
L G+ +Q+V +HPS+ L P +V+Y+E + T+R F+R V + W
Sbjct: 576 MLRHNGYRTLSFQSQLVQVHPSSVLSADNDGMMPNYVVYHELISTTRPFMRNVCAVDMAW 635
Query: 519 LVDI 522
+ I
Sbjct: 636 VAPI 639
>AT4G16680.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr4:9388613-9390774
REVERSE LENGTH=656
Length = 656
Score = 353 bits (907), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 181/318 (56%), Positives = 228/318 (71%), Gaps = 11/318 (3%)
Query: 1 MLLREAMTDPLLERYKVIILDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEK 60
MLLRE + +P L+ Y VII+DEAHERTL+TD+LF L+K+V K RPDL+L++ SATLEA+K
Sbjct: 315 MLLRELLIEPKLDSYSVIIIDEAHERTLSTDILFALVKDVAKVRPDLRLIISSATLEAKK 374
Query: 61 FQGYFFGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHTCEPPGDILVFLTGEE 120
F YF A + +PGR +PVE + + PE DYLE IRTVVQIH E GDILVFLTG+E
Sbjct: 375 FSEYFDSARIYLIPGRRYPVEKLFRKCPEPDYLETVIRTVVQIHQTEAIGDILVFLTGQE 434
Query: 121 EIEDACRKISKEVSNLGDQVGAVKAVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVV 180
EIE + + + +LG + + P+YS LP +Q K+FE RK+V+
Sbjct: 435 EIETVETNLKRRMMDLGTKGSEIIICPIYSNLPTPLQAKVFE-------PAPKGTRKVVL 487
Query: 181 STNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPG 240
+TNIAETSLTIDG+ YVIDPG+ K YNPR +ESLLV+PISKASA QR+GR+GRT PG
Sbjct: 488 ATNIAETSLTIDGVKYVIDPGYCKINSYNPRTGMESLLVTPISKASAAQRAGRSGRTGPG 547
Query: 241 KCFRLYTERSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRA 300
KCFRLY + DL+P T PEI R+NLA+ VLTLK LGI D+ +FDFMDPP L++A
Sbjct: 548 KCFRLYNIK----DLEPTTIPEIQRANLASVVLTLKSLGIQDVFNFDFMDPPPENALLKA 603
Query: 301 LEVLNYLGALDDEGNLTK 318
LE+L LGALD+ G +TK
Sbjct: 604 LELLYALGALDEIGEITK 621
>AT5G10370.1 | Symbols: | helicase domain-containing protein / IBR
domain-containing protein / zinc finger protein-related
| chr5:3261245-3267188 FORWARD LENGTH=1775
Length = 1775
Score = 255 bits (652), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 177/557 (31%), Positives = 288/557 (51%), Gaps = 53/557 (9%)
Query: 2 LLREAMTDPLLERYKVIILDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKF 61
LL+ M D L +I+DEAHER+L TD+L LLK++L R DL+LV+MSAT +A++
Sbjct: 408 LLQHYMKDRSLSGISCVIIDEAHERSLNTDLLLALLKKLLSRRIDLRLVIMSATADAKQL 467
Query: 62 QGYFFGAPLMKVPGRLHPVEIFYTQEPERD---------YLEAAIRTVVQIHTCEPPGDI 112
YFF ++ V GR PVEI Y+ + Y+ ++ V+IH E G I
Sbjct: 468 SQYFFSCGILLVNGRNFPVEIVYSPSDTEENSVVGGIASYVGDVVKMAVEIHKTEKEGTI 527
Query: 113 LVFLTGEEEIEDACRKISKEVSNLGDQVGAVKAVPLYSTLPPAMQQKIFEXXXXXXXXXX 172
L FLT + E+E AC + + A+PL+ L Q ++F+
Sbjct: 528 LAFLTSQAEVEWACERFI---------TPSAIALPLHGKLSFEEQFRVFQNHPGR----- 573
Query: 173 XXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSG 232
RK++ +TNIAETSLTI G+ YVID G K+ Y PR + L V +S++SA QR+G
Sbjct: 574 ---RKVIFATNIAETSLTIPGVKYVIDSGMVKESKYEPRTGMSILKVCRVSQSSARQRAG 630
Query: 233 RAGRTQPGKCFRLYTERSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPP 292
RAGRT+PG+C+RLY++ F++ + PEI R +L +L + LG++++ F+F+D P
Sbjct: 631 RAGRTEPGRCYRLYSKNDFDS-MNLNQEPEIRRVHLGVALLRMLALGVNNIAEFNFVDAP 689
Query: 293 APETLMRALEVLNYLGALDDEGN---LTKLGEIMSEFPLDPLMSKMLVVSPEFNCSNEML 349
PE + A++ L LGA+ ++ LT+ G + + L+P + K+++ E +
Sbjct: 690 VPEAIAMAVQNLVQLGAVVEKNGVHELTQEGHCLVKLGLEPKLGKLILGCFRHRMGKEGI 749
Query: 350 SIAAMLSVPN---CFVRPREAQKAADEAKATFGHIDGDHLTLLNVYHAYKQ--NNEDPSW 404
+AA+++ + C V + + AD K F + +GD TLL+VY + W
Sbjct: 750 VLAAVMANASSIFCRVGNFDDKMKADRLKVQFCNQNGDLFTLLSVYKEWASLPRERRNKW 809
Query: 405 CYDNFVNHRALKSADNVRQQLLRIMGRFNLKLCSTDF------NSRDYYVNIRKAMLSGY 458
C++N +N ++++ ++ ++L + R L L S + + +++ +L+
Sbjct: 810 CWENSLNAKSMRRCEDTVKELEICIER-ELTLVSPSYWVWNPNEGTKHDKHLKMVILASL 868
Query: 459 FMQVAHLERTGH----YLTVKDNQVVHLHPSTCL---DHKPEWVIYNEYVLTSRNFIRTV 511
VA TG+ Y Q V LHPS L KP WV++ E + ++ V
Sbjct: 869 AENVAMY--TGYNQLGYEVALTGQQVQLHPSCSLLAFGQKPSWVVFGELLSIVDQYLVCV 926
Query: 512 T--DIRGEWLVDIAPHY 526
T D +++D P +
Sbjct: 927 TACDFEALYMLDPPPPF 943
>AT4G01020.1 | Symbols: | helicase domain-containing protein / IBR
domain-containing protein / zinc finger protein-related
| chr4:439086-445043 FORWARD LENGTH=1787
Length = 1787
Score = 252 bits (643), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 179/563 (31%), Positives = 287/563 (50%), Gaps = 65/563 (11%)
Query: 2 LLREAMTDPLLERYKVIILDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKF 61
LL+ M D L +I+DEAHER+L TD+L LL+++L R DL+LV+MSAT +A +
Sbjct: 405 LLQHYMKDRSLSGISCVIIDEAHERSLNTDLLLALLRKLLSRRIDLRLVIMSATADANQL 464
Query: 62 QGYFFGAPLMKVPGRLHPVEIFYTQEPERD---------YLEAAIRTVVQIHTCEPPGDI 112
Y F ++ V GR PVEI Y+ + Y ++ V+IH E G I
Sbjct: 465 SQYLFDCGILHVNGRNFPVEIVYSPSGTEENSVVGRIASYAGDVVKMAVEIHKTEKEGTI 524
Query: 113 LVFLTGEEEIEDACRKISKEVSNLGDQVGAVKAVPLYSTLPPAMQQKIFEXXXXXXXXXX 172
L FLT + E+E AC + + A+PL+ L Q +F+
Sbjct: 525 LAFLTSQAEVEWACERFV---------APSAIALPLHGKLSFEEQFMVFQNYPGR----- 570
Query: 173 XXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSG 232
RK++ +TNIAETSLTI G+ YVID G K+ Y PR + L V +S++SA QR+G
Sbjct: 571 ---RKVIFATNIAETSLTIPGVKYVIDSGMVKESKYEPRTGMSILKVCQVSQSSARQRAG 627
Query: 233 RAGRTQPGKCFRLYTERSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPP 292
RAGRT+PG+C+RLY++ F++ + PEI R +L +L + LGID++ F+F+D P
Sbjct: 628 RAGRTEPGRCYRLYSKTDFDS-MNLNQEPEIRRVHLGVALLRMLALGIDNIAAFEFVDAP 686
Query: 293 APETLMRALEVLNYLGALDDEGN---LTKLGEIMSEFPLDPLMSKMLVVSPEFNCSNEML 349
PE + A++ L LGA+ ++ LT+ G + + L+P + K+++ E +
Sbjct: 687 VPEAIAMAIQNLVQLGAVVEKNGVLELTQEGHCLVKLGLEPKLGKLILGCFRHRMGKEGI 746
Query: 350 SIAAMLSVPN---CFVRPREAQKAADEAKATFGHIDGDHLTLLNVYHAYKQNNED--PSW 404
+AA+++ + C V + + AD K F + +GD TLL+VY + D W
Sbjct: 747 VLAAVMANASSIFCRVGNFDDKMKADRLKVQFCNDNGDLFTLLSVYKEWASLPRDRRNKW 806
Query: 405 CYDNFVNHRALKSADNVRQQLLRIMGRFNLKLCSTDF--------NSRDYYVNI------ 450
C++N +N ++++ ++ ++L + R L L S + D Y+ +
Sbjct: 807 CWENSLNAKSMRRCEDTVKELEICIER-ELTLVSPSYWVWNPNEGTKHDKYLKMVILASL 865
Query: 451 --RKAMLSGYFMQVAHLERTGHYLTVKDNQVVHLHPSTCL---DHKPEWVIYNEYVLTSR 505
AM +GY ++ G+ + + Q V LHPS L KP WV++ E +
Sbjct: 866 AENVAMYTGY-------DQLGYEVALTSQQ-VQLHPSCSLLAFGQKPSWVVFGELLSIVD 917
Query: 506 NFIRTVT--DIRGEWLVDIAPHY 526
++ VT D +++D P +
Sbjct: 918 QYLVCVTAFDFEALYMLDPPPPF 940
>AT1G48650.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:17989670-17995169 REVERSE LENGTH=1197
Length = 1197
Score = 232 bits (592), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 192/598 (32%), Positives = 301/598 (50%), Gaps = 98/598 (16%)
Query: 1 MLLREAMTDPLLERYKVIILDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEK 60
+LLR + D L+ +++DE HER + D L +LK++L RPDLKL++MSATL AE
Sbjct: 403 VLLRRLLVDRSLKGVTHVVVDEIHERGMNEDFLLIVLKDLLPRRPDLKLILMSATLNAEL 462
Query: 61 FQGYFFGAPLMKVPG-----RLHPVEIF----------------YTQEPE---------- 89
F YF GAP M +PG R H +E + Y +E
Sbjct: 463 FSSYFGGAPAMHIPGFTYPVRAHFLEDYLETSGYRLTTYNQIDDYGEEKTWKMQKQAQFK 522
Query: 90 ----------RDYLEAA------IRT--------------------VVQIHTCEPPGDIL 113
D LEAA RT + I E PG +L
Sbjct: 523 KRKSLISSAVEDALEAADFKGYNFRTRDSLSCWSPDSIGFNLIENVLCHIVKGERPGAVL 582
Query: 114 VFLTGEEEIEDACRKISKEVSNLGDQVGAVKAVPLYSTLPPAMQQKIFEXXXXXXXXXXX 173
VF+TG ++I ++ S LGD V + + ++ + Q+ IF+
Sbjct: 583 VFMTGWDDINSLKNQLEAH-SLLGDP-NKVLLLACHGSMASSEQRLIFDRPPEGI----- 635
Query: 174 XXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGR 233
RKIV++TN+AETS+TI+ +VYVID G AK+ Y+ LL S ISKA+A QR GR
Sbjct: 636 --RKIVLATNMAETSITINDVVYVIDCGKAKETSYDALNNTPCLLPSWISKAAARQRRGR 693
Query: 234 AGRTQPGKCFRLYTERSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHF--DFMDP 291
AGR PG+C+ LY R PE+LR+ L + L +K LG+ + F + P
Sbjct: 694 AGRVMPGECYHLYP-RCVYEAFADYQQPELLRTPLQSLCLQIKSLGLGSISEFLSRALQP 752
Query: 292 PAPETLMRALEVLNYLGALDDEGNLTKLGEIMSEFPLDPLMSKMLVVSPEFNCSNEMLSI 351
P ++ A+E L +GALDD+ NLT LG+ +S P++P + KML++ FNC + ++++
Sbjct: 753 PEALSVQNAVEYLKIIGALDDDENLTPLGKNLSMLPVEPKLGKMLILGAIFNCLDPVMTV 812
Query: 352 AAMLSVPNCFVRPREAQKAADEAKATFGHID-GDHLTLLNVYHAYKQNNEDPS---WCYD 407
A LSV + F+ P + + A+ A++ F D DHLTL+ Y+ +K S +C+
Sbjct: 813 VAGLSVRDPFLMPFDKKDLAETARSKFSGRDYSDHLTLVRAYNGWKDAERTHSGYDYCWK 872
Query: 408 NFVNHRALKSADNVRQQLLRIMGRF----NLKLCSTDFNSRDYYVNIRKAMLSGYF---M 460
NF++ + LK+ D++R+Q ++ N++ CS S D ++ +R + +G F
Sbjct: 873 NFLSSQTLKAMDSMRKQFFNLLKEASLIDNIEGCSK--LSHDEHL-VRAIICAGMFPGVC 929
Query: 461 QVAHLERTGHYLTVKDNQVVHLHPSTCLDHKP----EWVIYNEYVLTSRNFIRTVTDI 514
V + E++ T++D QV+ L+ S+ + P W+++N+ V + F+R T +
Sbjct: 930 SVVNKEKSITLKTMEDGQVL-LYSSSVNGNVPMIPFPWLVFNDKVKVNSVFLRDSTAV 986
>AT1G48650.2 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:17989517-17995169 REVERSE LENGTH=1206
Length = 1206
Score = 232 bits (591), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 192/598 (32%), Positives = 301/598 (50%), Gaps = 98/598 (16%)
Query: 1 MLLREAMTDPLLERYKVIILDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEK 60
+LLR + D L+ +++DE HER + D L +LK++L RPDLKL++MSATL AE
Sbjct: 403 VLLRRLLVDRSLKGVTHVVVDEIHERGMNEDFLLIVLKDLLPRRPDLKLILMSATLNAEL 462
Query: 61 FQGYFFGAPLMKVPG-----RLHPVEIF----------------YTQEPE---------- 89
F YF GAP M +PG R H +E + Y +E
Sbjct: 463 FSSYFGGAPAMHIPGFTYPVRAHFLEDYLETSGYRLTTYNQIDDYGEEKTWKMQKQAQFK 522
Query: 90 ----------RDYLEAA------IRT--------------------VVQIHTCEPPGDIL 113
D LEAA RT + I E PG +L
Sbjct: 523 KRKSLISSAVEDALEAADFKGYNFRTRDSLSCWSPDSIGFNLIENVLCHIVKGERPGAVL 582
Query: 114 VFLTGEEEIEDACRKISKEVSNLGDQVGAVKAVPLYSTLPPAMQQKIFEXXXXXXXXXXX 173
VF+TG ++I ++ S LGD V + + ++ + Q+ IF+
Sbjct: 583 VFMTGWDDINSLKNQLEAH-SLLGDP-NKVLLLACHGSMASSEQRLIFDRPPEGI----- 635
Query: 174 XXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGR 233
RKIV++TN+AETS+TI+ +VYVID G AK+ Y+ LL S ISKA+A QR GR
Sbjct: 636 --RKIVLATNMAETSITINDVVYVIDCGKAKETSYDALNNTPCLLPSWISKAAARQRRGR 693
Query: 234 AGRTQPGKCFRLYTERSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHF--DFMDP 291
AGR PG+C+ LY R PE+LR+ L + L +K LG+ + F + P
Sbjct: 694 AGRVMPGECYHLYP-RCVYEAFADYQQPELLRTPLQSLCLQIKSLGLGSISEFLSRALQP 752
Query: 292 PAPETLMRALEVLNYLGALDDEGNLTKLGEIMSEFPLDPLMSKMLVVSPEFNCSNEMLSI 351
P ++ A+E L +GALDD+ NLT LG+ +S P++P + KML++ FNC + ++++
Sbjct: 753 PEALSVQNAVEYLKIIGALDDDENLTPLGKNLSMLPVEPKLGKMLILGAIFNCLDPVMTV 812
Query: 352 AAMLSVPNCFVRPREAQKAADEAKATFGHID-GDHLTLLNVYHAYKQNNEDPS---WCYD 407
A LSV + F+ P + + A+ A++ F D DHLTL+ Y+ +K S +C+
Sbjct: 813 VAGLSVRDPFLMPFDKKDLAETARSKFSGRDYSDHLTLVRAYNGWKDAERTHSGYDYCWK 872
Query: 408 NFVNHRALKSADNVRQQLLRIMGRF----NLKLCSTDFNSRDYYVNIRKAMLSGYF---M 460
NF++ + LK+ D++R+Q ++ N++ CS S D ++ +R + +G F
Sbjct: 873 NFLSSQTLKAMDSMRKQFFNLLKEASLIDNIEGCSK--LSHDEHL-VRAIICAGMFPGVC 929
Query: 461 QVAHLERTGHYLTVKDNQVVHLHPSTCLDHKP----EWVIYNEYVLTSRNFIRTVTDI 514
V + E++ T++D QV+ L+ S+ + P W+++N+ V + F+R T +
Sbjct: 930 SVVNKEKSITLKTMEDGQVL-LYSSSVNGNVPMIPFPWLVFNDKVKVNSVFLRDSTAV 986
>AT2G35920.1 | Symbols: | RNA helicase family protein |
chr2:15075674-15080506 FORWARD LENGTH=995
Length = 995
Score = 219 bits (557), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 156/454 (34%), Positives = 239/454 (52%), Gaps = 32/454 (7%)
Query: 78 HPVEIFYTQEPERDYLEAAIRTVVQIHTCEPPGDILVFLTGEEEIEDACRKISKEVSNLG 137
+ +E + + + D +EA I + ++ E G ILVFLTG +EI KI+ ++N
Sbjct: 475 NSLEAWSGAQIDVDLVEATIEHICRL---EGGGAILVFLTGWDEISKLLEKIN--MNNFL 529
Query: 138 DQVGAVKAVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYV 197
+PL+ ++P Q++IF+ RKIV++TNIAE+S+TID +VYV
Sbjct: 530 GDSSKFLVLPLHGSMPTVNQREIFDRPPPNK-------RKIVLATNIAESSITIDDVVYV 582
Query: 198 IDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTERSFNNDLQP 257
+D G AK+ Y+ +V LL S ISKASAHQR GRAGR Q G C+RLY + + D P
Sbjct: 583 VDCGKAKETSYDALNKVACLLPSWISKASAHQRRGRAGRVQAGVCYRLYPKVIY--DAFP 640
Query: 258 Q-TYPEILRSNLANTVLTLKKLGIDDLVHF--DFMDPPAPETLMRALEVLNYLGALDDEG 314
Q PEI+R+ L L +K L + + F + PP + A+E+L +GAL+D
Sbjct: 641 QYQLPEIIRTPLQELCLHIKSLQVGSIGSFLAKALQPPDALAVENAIELLKTIGALNDVE 700
Query: 315 NLTKLGEIMSEFPLDPLMSKMLVVSPEFNCSNEMLSIAAMLSVPNCFVRPREAQKAADEA 374
LT LG + P+DP + KML++ F C N L+IAA L+ + FV P ++ ADEA
Sbjct: 701 ELTPLGRHLCTLPVDPNIGKMLLIGAIFQCVNPALTIAAALAYRSPFVLPLNRKEEADEA 760
Query: 375 KATF-GHIDGDHLTLLNVYHAY---KQNNEDPSWCYDNFVNHRALKSADNVRQQLLRIMG 430
K F G DH+ LL Y Y K+ + +C+ NF++ L+ +++R Q L ++
Sbjct: 761 KRYFAGDSCSDHIALLKAYEGYRDAKRGGNEKDFCWQNFLSPVTLRMMEDMRNQFLDLLS 820
Query: 431 RFNL--KLCSTDFNSRDYYVNIRKAML-SGYFMQVAHLERTGHYLT--VKDNQVVHLHPS 485
K +N Y + + A+L +G + V +R G K+ V +HP
Sbjct: 821 DIGFVDKSKPNAYNQYSYDMEMISAVLCAGLYPNVVQCKRRGKRTAFYTKELGKVDIHPG 880
Query: 486 TC-----LDHKPEWVIYNEYVLTSRNFIRTVTDI 514
+ L P +++Y+E V T+ +IR T+I
Sbjct: 881 SVNARVNLFSLP-YLVYSEKVKTTSVYIRDSTNI 913
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 54/84 (64%), Gaps = 1/84 (1%)
Query: 1 MLLREAMTDPLLERYKVIILDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEK 60
+LLR + DP L +++DE HER + D L +L+++L RPDL+L++MSAT+ A+
Sbjct: 332 VLLRRLIEDPNLTNVSHLLVDEIHERGMNEDFLLIILRDLLPRRPDLRLILMSATINADM 391
Query: 61 FQGYFFGAPLMKVPGRLHPV-EIF 83
F YF +P M +PG PV E+F
Sbjct: 392 FSTYFGNSPTMHIPGFTFPVAELF 415
>AT2G01130.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr2:88847-94635 REVERSE LENGTH=1113
Length = 1113
Score = 202 bits (514), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 134/424 (31%), Positives = 227/424 (53%), Gaps = 33/424 (7%)
Query: 107 EPPGDILVFLTGEEEIEDACRKISKEVSNLGDQVGAVKAVPLYSTLPPAMQQKIFEXXXX 166
E PG IL+FLTG ++I K+ ++ + V + + ++ Q+ IFE
Sbjct: 496 EGPGGILIFLTGWDDISSLKEKL--QIHPIFGNPDLVMLLACHGSMETFEQRLIFEEPAS 553
Query: 167 XXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKAS 226
RKIV++TNIAETS+TI+ + +VID G AK+ Y+ LL S ISK S
Sbjct: 554 GV-------RKIVLATNIAETSITINDVAFVIDCGKAKETSYDALNNTPCLLPSWISKVS 606
Query: 227 AHQRSGRAGRTQPGKCFRLYTERSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHF 286
A QR GRAGR +PG+C+ LY + ++ + Q PEILR+ L + L +K L + + F
Sbjct: 607 AQQRRGRAGRVRPGQCYHLYPKCVYDAFAEYQ-LPEILRTPLHSLCLQIKSLNLGSISEF 665
Query: 287 DFMDPPAPETL--MRALEVLNYLGALDDEGNLTKLGEIMSEFPLDPLMSKMLVVSPEFNC 344
+PE L +A+ L +GALD+ +LT LG +S+ P++P + KML++ C
Sbjct: 666 LSRALQSPELLAVQKAIAFLKIIGALDENEDLTTLGRYLSKLPMEPKLGKMLILGAILGC 725
Query: 345 SNEMLSIAAMLSVPNCFVRPREAQKAADEAKATFGHIDGDHLTLLNVYHAYKQNNEDPS- 403
+ +L++AA LSV + F+ P++ + A+ AK+ F DHL L+ Y +K+ E+ +
Sbjct: 726 LDPILTVAAGLSVRDPFLTPQDKKDLAEAAKSQFSRDHSDHLALVRAYEGWKKAEEESAV 785
Query: 404 --WCYDNFVNHRALKSADNVRQQLLRIMGRFNL-----KLCSTDFNSRDYYVNIRKAMLS 456
+C+ NF++ ++L++ D++R++ ++ L +C+++ N N+ +A++
Sbjct: 786 YDYCWKNFLSIQSLRAIDSLRKEFFSLLKDTGLIDGNPSICNSEGND----ANLTRAVIC 841
Query: 457 GYFM-----QVAHLERTGHYLTVKDNQVVHLHPSTCLDHKP---EWVIYNEYVLTSRNFI 508
Y M V H ER+ T++D QV+ S W+++NE + + F+
Sbjct: 842 -YGMYPGICSVVHNERSFSLKTMEDGQVLLYSNSENARETKIPYPWLVFNEKIKVNSVFL 900
Query: 509 RTVT 512
R T
Sbjct: 901 RDST 904
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 55/87 (63%)
Query: 1 MLLREAMTDPLLERYKVIILDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEK 60
+LLR + D L +I+DE HER + D L +LK++L R +LKL++MSATL+AE
Sbjct: 324 ILLRRLLVDRNLRGVTHVIVDEIHERGMNEDFLLIILKDLLSRRSELKLILMSATLDAEL 383
Query: 61 FQGYFFGAPLMKVPGRLHPVEIFYTQE 87
F YF GA ++ +PG +PV + ++
Sbjct: 384 FSSYFGGAGVIYIPGFTYPVRSHFLED 410
>AT1G33390.1 | Symbols: ATFAS4, FAS4 | RNA helicase family protein |
chr1:12099738-12104108 REVERSE LENGTH=1237
Length = 1237
Score = 190 bits (483), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 136/450 (30%), Positives = 215/450 (47%), Gaps = 79/450 (17%)
Query: 141 GAVKAVPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDP 200
G ++ +PLY+ L PA Q ++FE R +VV+TN+AETSLTI GI YV+D
Sbjct: 645 GKLRVLPLYAMLSPAAQLRVFEEVEKEE-------RLVVVATNVAETSLTIPGIKYVVDT 697
Query: 201 GFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTERSFNNDLQPQTY 260
G K K Y+ + +ES V IS+ASA QR+GRAGRT PG C+RLY+ F+N + +
Sbjct: 698 GRVKVKNYDSKTGMESYEVDWISQASASQRAGRAGRTGPGHCYRLYSSAVFSNIFEESSL 757
Query: 261 PEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDEGNLTKLG 320
PEI++ + +L +K + I + +F F PP P + A L L ALD G LT LG
Sbjct: 758 PEIMKVPVDGVILLMKSMNIPKVENFPFPTPPEPSAIREAERCLKALEALDSNGGLTPLG 817
Query: 321 EIMSEFPLDPLMSKMLVV-------SPEFNCSNEMLS----IAAMLSVPNCFVRPREAQK 369
+ MS +P+ P S+ML+ + ++ +N +L A LS+PN + E +K
Sbjct: 818 KAMSHYPMSPRHSRMLLTVIQMLKETRNYSRANLILGYAVAAVAALSLPNPLIMEFEGEK 877
Query: 370 A-----ADE-------------------AKATFGHIDGDHLTLLNVYHAYKQNNEDPSWC 405
AD+ A+ F + D LT+ H+++ + +C
Sbjct: 878 KNESKDADKTVKQEDKQRKKDRKEKIKAARDRFSNPSSDALTVAYALHSFEVSENGMGFC 937
Query: 406 YDNFVNHRALKSADNVRQQLLRIMGRFNLKLCSTDFNSRDYYV-------NIRK------ 452
N ++ + + ++ QLLR++ FN C + D + ++ K
Sbjct: 938 EANGLHLKTMDEMSKLKDQLLRLV--FN---CCKPSETEDSFSWTHGTIQDVEKSWRITT 992
Query: 453 ------------------AMLSGYFMQVAHLERTGHYLTVKDNQVVHLHP-STCLDHKPE 493
A+ +G+ +VA R Y + V LH S+ ++ PE
Sbjct: 993 STSSKTPLLQNEEELLGEAICAGWADRVARKTRATEYQACAVQEPVFLHRWSSLINSAPE 1052
Query: 494 WVIYNEYVLTSRNFIRTVTDIRGEWLVDIA 523
++Y+E +LT+R ++ T +R EWLV A
Sbjct: 1053 LLVYSELLLTNRPYMHGATRVRPEWLVKHA 1082
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/164 (40%), Positives = 90/164 (54%), Gaps = 28/164 (17%)
Query: 1 MLLREAMTDPLLERYKVIILDEAHERTLATDVLFGLLKEVLKNRPD-------------- 46
+LLRE D LL RY VIILDEAHER+L TD+L G+L V+K R +
Sbjct: 347 ILLREIQNDFLLRRYSVIILDEAHERSLNTDILIGMLTRVIKIRQEYYEEQQKSLQSGGT 406
Query: 47 ---------LKLVVMSATLEAEKFQG----YFFGAPLMKVPGRLHPVEIFYTQEPE-RDY 92
LKL++MSATL E F + PL++VP R +PV I ++++ E DY
Sbjct: 407 VTSECQITPLKLILMSATLRVEDFVSGKRLFPNIPPLIEVPTRQYPVTIHFSKKTEIVDY 466
Query: 93 LEAAIRTVVQIHTCEPPGDILVFLTGEEEIEDACRKISKEVSNL 136
+ A + V+ IH P G ILVF+TG+ E++ C K+ K L
Sbjct: 467 IGEAYKKVMSIHKKLPQGGILVFVTGQREVDYLCEKLRKSSKEL 510
>AT1G58060.1 | Symbols: | RNA helicase family protein |
chr1:21489480-21501775 REVERSE LENGTH=1459
Length = 1459
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 138/472 (29%), Positives = 229/472 (48%), Gaps = 74/472 (15%)
Query: 105 TCEPPGDILVFLTGEEEIEDACRKISKEVSNLGDQVGAVKAVPLYSTLPPAMQQKIFEXX 164
TCE G IL+FL G EI ++ G A +PL+S++ + Q+K+F
Sbjct: 912 TCEE-GAILIFLPGVAEIYMLLDMLAASYRFRGP--AADWLLPLHSSIASSEQRKVF--- 965
Query: 165 XXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISK 224
RK++ +TNIAETS+TID +VYVID G K+ YNP+ ++ S++ IS+
Sbjct: 966 ----LRPPKGLRKVIAATNIAETSITIDDVVYVIDSGKHKENRYNPQKKLSSMVEDWISQ 1021
Query: 225 ASAHQRSGRAGRTQPGKCFRLYTERSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLV 284
A+A QR+GRAGR +PG CF LYT F ++P PE+LR L L +K LG+ +
Sbjct: 1022 ANARQRTGRAGRVKPGICFSLYTRYRFEKLMRPYQVPEMLRMPLVELCLQIKLLGLGHIK 1081
Query: 285 HF--DFMDPPAPETLMRALEVLNYLGALDDEGNLTKLGEIMSEFPLDPLMSKMLVVSPEF 342
F ++PP+ + A+ +L+ +GA++ + LT LG +++ P+D L+ KML+ F
Sbjct: 1082 PFLSRALEPPSEGAMTSAISLLHEVGAVEGDEELTPLGHHLAKLPVDVLIGKMLLYGGIF 1141
Query: 343 NCSNEMLSIAAMLSVPNCFVRPREAQKAADEAKATFGHIDG-------------DHLTLL 389
C + +LSIAA LS + F+ P++ ++ D K +G DHL ++
Sbjct: 1142 GCLSPILSIAAFLSYKSPFIYPKDEKQNVDRVKLALLSDNGVSSSDLNNNDRQSDHLLMM 1201
Query: 390 NVYHAY------KQNNEDPSWCYDNFVNHRALKSADNVRQQLLRIM-----------GRF 432
Y + + +C F++ ++ ++R Q ++ G F
Sbjct: 1202 VAYDKWVKILQERGMKAAQRFCESKFLSSSVMRMIRDMRVQFGTLLADIGLINLPKTGEF 1261
Query: 433 ------NLKLCSTD----FNSRDYYVNIRKAML-SGYFMQVAH-----LERTGHYLTVKD 476
NL + +D FN + KA+L +G + +A E T + LT +
Sbjct: 1262 SGRKKENLDVWFSDPTQPFNMYSQQPEVVKAILCAGLYPNIAANDKGITETTFNSLTKQG 1321
Query: 477 NQV------------VHLHPSTCLDH----KPEWVIYNEYVLTSRNFIRTVT 512
NQ VH+HPS+ + + ++++ E V T++ ++R T
Sbjct: 1322 NQTKSYSAWYDGRREVHIHPSSINSNFKAFQNPFLVFLEKVETNKVYLRDTT 1373
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 53/93 (56%), Gaps = 6/93 (6%)
Query: 1 MLLREAMTDPLLERYKVIILDEAHERTLATDVLFGLLKEVLKNRP------DLKLVVMSA 54
+LLR+ D L II+DE HER+L D L +LK +++ + LK+++MSA
Sbjct: 722 ILLRKLAGDRTLNDVTHIIVDEVHERSLLGDFLLIILKSLIEKQSCDNTSRKLKVILMSA 781
Query: 55 TLEAEKFQGYFFGAPLMKVPGRLHPVEIFYTQE 87
T++A+ F YF P++ GR HPV + +E
Sbjct: 782 TVDADLFSRYFGHCPVITAQGRTHPVTTHFLEE 814
>AT5G04895.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr5:1428796-1434516 FORWARD LENGTH=1161
Length = 1161
Score = 172 bits (437), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 141/432 (32%), Positives = 227/432 (52%), Gaps = 28/432 (6%)
Query: 100 VVQIHTC--EPPGDILVFLTGEEEIEDACRKISKEVSNLGDQVGAVKAVPLYSTLPPAMQ 157
V H C E PG +LVFLTG ++I +I K LGD V + + ++ A Q
Sbjct: 528 AVLCHICRKERPGAVLVFLTGWDDIRSLSDQI-KAHPLLGDP-NRVLLLMCHGSMATAEQ 585
Query: 158 QKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESL 217
+ IFE RKIV++TN+AE S+TI+ +V+V+D G AK+ Y+ L
Sbjct: 586 RLIFERAPPNI-------RKIVLATNMAEASITINDVVFVVDCGKAKETTYDALNNTPCL 638
Query: 218 LVSPISKASAHQRSGRAGRTQPGKCFRLYTERSFNNDLQPQTYPEILRSNLANTVLTLKK 277
L S IS+ASA QR GRAGR PG+C+ LY + ++ + Q PE+LR+ L + L +K
Sbjct: 639 LPSWISQASARQRRGRAGRLFPGECYHLYPKCVYDAFAEYQ-LPELLRTPLNSLCLQIKS 697
Query: 278 LGIDDLVHFDFMDPPAPETL--MRALEVLNYLGALDDEGNLTKLGEIMSEFPLDPLMSKM 335
L ++ + F APE+L A+ L +GALD++ NLT LG+++S P+DP + KM
Sbjct: 698 LQVESIAEFLSAALQAPESLAVQNAIGFLKMIGALDEKENLTDLGKLLSILPVDPKLGKM 757
Query: 336 LVVSPEFNCSNEMLSIAAMLSVPNCFVRPREAQKAADEAKATFGHID-GDHLTLLNVYHA 394
L++ F C + +L+I + LSV + F+ P++ + A AK F D DH+ L+ +
Sbjct: 758 LIMGAIFRCFDPILTIVSGLSVRDPFLLPQDKKDLALSAKLRFSAKDYSDHMALVRAFEG 817
Query: 395 YKQNNEDPS---WCYDNFVNHRALKSADNVRQQLLRIMGRFNLKLCSTDFNSRDYYVN-- 449
+K + S +C+ NF++ + L++ ++R+Q I+ L N++ +
Sbjct: 818 WKDAEREGSAYEFCWRNFLSAQTLQAIHSLRKQFNYILKEAGLVHDDLALNNKLSHNQSL 877
Query: 450 IRKAMLSGYF---MQVAHLERTGHYLTVKDNQVVHLHPSTCLDHKPE----WVIYNEYVL 502
+R + SG F V H E + + T+ D Q V L+ ++ P W+++ E V
Sbjct: 878 VRAVICSGLFPGIASVVHRETSMSFKTMDDGQ-VSLYANSVNSRFPTIPYPWLVFGEKVK 936
Query: 503 TSRNFIRTVTDI 514
+ IR T +
Sbjct: 937 VNAVLIRDSTGV 948
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 56/87 (64%)
Query: 1 MLLREAMTDPLLERYKVIILDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEK 60
+LLR ++D L + +DE HER + D L +LKE+L RPDL+LV+MSATL AE
Sbjct: 364 ILLRRLLSDRNLNGVTHVFVDEIHERGMNEDFLIIVLKELLPRRPDLRLVLMSATLNAEL 423
Query: 61 FQGYFFGAPLMKVPGRLHPVEIFYTQE 87
F Y+ GAP + +PG HPV+ + ++
Sbjct: 424 FSNYYGGAPTIHIPGFTHPVKAHFLED 450
>AT1G58050.1 | Symbols: | RNA helicase family protein |
chr1:21478590-21487839 REVERSE LENGTH=1417
Length = 1417
Score = 165 bits (417), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 117/354 (33%), Positives = 182/354 (51%), Gaps = 34/354 (9%)
Query: 105 TCEPPGDILVFLTGEEEIEDACRKISKEVSNLGDQVGAVKAVPLYSTLPPAMQQKIFEXX 164
TCE G ILVFL G EI +++ G + +PL+S++ Q+K+F
Sbjct: 879 TCEE-GAILVFLPGMSEINMLLNRLAASYRFRGASGDWL--LPLHSSIASTEQKKVF--- 932
Query: 165 XXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISK 224
RK++++TNIAETS+TI+ +VYVID G K+ YNP ++ S++ +SK
Sbjct: 933 ----LRPPKGIRKVIIATNIAETSITIEDVVYVIDSGKHKENRYNPHKKLSSMVEDWVSK 988
Query: 225 ASAHQRSGRAGRTQPGKCFRLYTERSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLV 284
A+A QR GRAGR +PG CF LYT F ++P PE+LR L L +K LG+ +
Sbjct: 989 ANARQRMGRAGRVKPGHCFSLYTRHRFEKLMRPYQVPEMLRVPLVELCLHIKLLGLGQIK 1048
Query: 285 HF--DFMDPPAPETLMRALEVLNYLGALDDEGNLTKLGEIMSEFPLDPLMSKMLVVSPEF 342
F ++PP+ + A+ +L+ +GAL+ + LT LG +++ P+D L+ KML+ F
Sbjct: 1049 PFLSKALEPPSESAINSAILLLHKVGALEGDEELTPLGHHLAKLPVDLLIGKMLLYGGIF 1108
Query: 343 NCSNEMLSIAAMLSVPNC-FVRPREAQKA--------AD--EAKATFGHID--GDHLTLL 389
C + +LSIAA LS FV ++ Q +D E+ + + D DHL ++
Sbjct: 1109 GCLSPILSIAAFLSCCKSPFVYAKDEQNVDRVKLALLSDKLESSSNLNNNDRQSDHLLMV 1168
Query: 390 NVYHAY------KQNNEDPSWCYDNFVNHRALKSADNVRQQ---LLRIMGRFNL 434
Y + + S+C F+N ++ R + LL +G NL
Sbjct: 1169 VAYEKWVRILHEQGFKAAESFCESKFLNSSVMRMMRERRVEFGMLLADIGLINL 1222
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 57/93 (61%), Gaps = 6/93 (6%)
Query: 1 MLLREAMTDPLLERYKVIILDEAHERTLATDVLFGLLKEVLKNR------PDLKLVVMSA 54
+LLR+ + D L+ II+DE HER+L D L +LK +++ + P LK+++MSA
Sbjct: 702 ILLRKLVGDTTLKDVTHIIVDEVHERSLMGDFLLIILKSLIEKQSWDNALPKLKVILMSA 761
Query: 55 TLEAEKFQGYFFGAPLMKVPGRLHPVEIFYTQE 87
T++A +F YF P++ GR HPV ++ ++
Sbjct: 762 TVDAHQFSRYFGQCPIITAQGRTHPVTTYFLED 794
>AT2G30800.1 | Symbols: HVT1, ATVT-1 | helicase in vascular tissue
and tapetum | chr2:13120585-13126635 REVERSE LENGTH=1299
Length = 1299
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 123/371 (33%), Positives = 181/371 (48%), Gaps = 27/371 (7%)
Query: 110 GDILVFLTGEEEIEDACRKISKEVSNLGDQVGAVKAVPLYSTLPPAMQQKIFEXXXXXXX 169
G ILVFL G ++I + R+ E D + L+S +P Q+K+F
Sbjct: 552 GAILVFLPGWDDI-NKTRQRLLENPFFADSA-KFDIICLHSMVPAGEQKKVFNRPPPGC- 608
Query: 170 XXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQ 229
RKIV++TNIAE+++TID +VYVID G K+K Y+P V +L S +SKA+A Q
Sbjct: 609 ------RKIVLATNIAESAVTIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKANAKQ 662
Query: 230 RSGRAGRTQPGKCFRLYTERSFNNDLQPQTYPEILRSNLANTVLTLKKLG----IDDLVH 285
R GRAGR QPG C+ LY+ R + PEI R + L +K L +D +
Sbjct: 663 RQGRAGRCQPGICYHLYS-RLRAASMPDFKVPEIKRMPVEELCLQVKILDPNCKTNDFLQ 721
Query: 286 FDFMDPPAPETLMRALEVLNYLGALDDEGNLTKLGEIMSEFPLDPLMSKMLVVSPEFNCS 345
+DPP +++ AL +L +GAL + LT+LGE P+ PL+SKML + NC
Sbjct: 722 -KLLDPPVDQSIANALSILQDIGALTPQEELTELGEKFGHLPVHPLISKMLFFAVLVNCL 780
Query: 346 NEMLSIAAMLSVPNCFVRP-----REAQKAADEAKATFGHIDGDHLTLLNVYHAYKQNNE 400
+ L++A F P R+ AA A+ D DHL ++ + +K
Sbjct: 781 DPALTLACAADYKEPFTMPMSPVERQKAAAAKLELASLCGGDSDHLAVVAAFECWKNAKG 840
Query: 401 ---DPSWCYDNFVNHRALKSADNVRQQLLRIMGRFNL---KLCSTDFNSRDYYVNIRKAM 454
+C FV+ A+K D +R QL + R + + S NSRD + +R +
Sbjct: 841 RGLSAEFCSQYFVSPSAMKMLDQMRSQLESELKRHGIIPNDISSCSQNSRDPGI-LRAVL 899
Query: 455 LSGYFMQVAHL 465
G + V L
Sbjct: 900 AVGLYPMVGRL 910
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 51/70 (72%)
Query: 18 IILDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFFGAPLMKVPGRL 77
II+DE HER +D + +++++L + P L+L++MSATL+AE+F GYF G P+++VPG
Sbjct: 310 IIVDEIHERDCYSDFMLAIIRDLLPSNPHLRLILMSATLDAERFSGYFGGCPVVRVPGFT 369
Query: 78 HPVEIFYTQE 87
+PV Y ++
Sbjct: 370 YPVRTLYLED 379
>AT1G06670.1 | Symbols: NIH | nuclear DEIH-boxhelicase |
chr1:2040567-2047333 FORWARD LENGTH=1576
Length = 1576
Score = 149 bits (375), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 114/366 (31%), Positives = 183/366 (50%), Gaps = 31/366 (8%)
Query: 85 TQEPERDYLEAAIRTVVQIHTCEPPGDILVFLTGEEEIEDACRKISKEVSNLGDQVGAVK 144
T +PE + ++ + +I + G ILVFL G EEI K+ L D+ A
Sbjct: 551 TIKPEEVDVGLIVKLMKKICSDSKDGAILVFLPGWEEISKTKEKL------LDDRFFAHS 604
Query: 145 A----VPLYSTLPPAMQQKIFEXXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDP 200
A + L+S +P Q+K+F RKIV++TNIAE+++TID +VYVID
Sbjct: 605 AKFIILCLHSRVPAEEQKKVFNRPPRGC-------RKIVLATNIAESAVTIDDVVYVIDS 657
Query: 201 GFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTERSFNNDLQPQTY 260
G K+K Y+P V +L S +SKA+A QR+GRAGR Q G C+ LY++ + L
Sbjct: 658 GRMKEKSYDPYNDVSTLQSSWVSKANAKQRAGRAGRCQAGICYHLYSKLRAAS-LPEYRV 716
Query: 261 PEILRSNLANTVLTLKKL----GIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDEGNL 316
PE++R + L +K L ++D + MDPP +++ AL +L +GAL E L
Sbjct: 717 PEVMRMPVDELCLQVKMLDPNCNVNDFLQ-KLMDPPVAQSIENALIILKDIGALTPEEEL 775
Query: 317 TKLGEIMSEFPLDPLMSKMLVVSPEFNCSNEMLSIAAMLSVPNCFVRP-----REAQKAA 371
T+LG+ + P+ P +SKM+ + NC + L +A + F P R+ AA
Sbjct: 776 TELGQKFGQLPVHPRISKMIYFAILVNCLDPALILACAADEKDPFTMPLSPGDRKKAAAA 835
Query: 372 DEAKATFGHIDGDHLTLLNVYHAYKQ---NNEDPSWCYDNFVNHRALKSADNVRQQLLRI 428
A+ DHL + + +K + + +C F++ +K D++ ++L
Sbjct: 836 KHELASLYGDHSDHLATVAAFQCWKNAKASGQAKEFCSKYFISQVVMKRLDDLCRKLQGE 895
Query: 429 MGRFNL 434
+ R +
Sbjct: 896 LNRHGV 901
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 49/67 (73%)
Query: 18 IILDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFFGAPLMKVPGRL 77
II+DE HER +D + +L+++L + P L+L++MSATL+AE+F YF G P+++VPG
Sbjct: 340 IIVDEIHERDSYSDFMLMILRDLLPSNPHLRLILMSATLDAERFSEYFGGCPVVRVPGFT 399
Query: 78 HPVEIFY 84
+PV F+
Sbjct: 400 YPVRTFF 406
>AT2G47680.1 | Symbols: | zinc finger (CCCH type) helicase family
protein | chr2:19545828-19550871 REVERSE LENGTH=1015
Length = 1015
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 141/291 (48%), Gaps = 40/291 (13%)
Query: 14 RYKVIILDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFFGAPLMKV 73
+YKVIILDE HER++ +D++ +K+ L DL++V+MSAT + +++ YF K
Sbjct: 137 KYKVIILDEVHERSVESDLVLVCVKQFLMKNNDLRVVLMSATADITRYRDYF------KE 190
Query: 74 PGRLHPVEIFYTQEPERD--------YLE--AAIRTVVQIHTCEPPG------------- 110
GR VE+ P++ YLE A + V + PG
Sbjct: 191 LGRGERVEVVAIPSPDQRTIFQRRVLYLEQVAGLLGVSSDLSAYCPGPSPSSADTEIKPE 250
Query: 111 ------DILVFLTGEE-EIEDACRKISKEVSNLGDQVGAVKAVPLYSTLP-PAMQQKIFE 162
D+++++ +E +IE + +L Q ++ P +++ + + I
Sbjct: 251 LQNLIHDLILYIHEKEPDIEKSILVFLPTYYSLEQQYHQLE--PFFASFEVHILHRSIDT 308
Query: 163 XXXXXXXXXXXXXRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPI 222
RK++++TNIAE+S+TI + YVID + Q ++P + +++ + +
Sbjct: 309 EQALAAMKICRSRRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDPSRKRDAVQLVWV 368
Query: 223 SKASAHQRSGRAGRTQPGKCFRLYTERSFNNDLQPQTYPEILRSNLANTVL 273
S++ A QR GR GRT G+ +RL +F N L+ P IL+ +L VL
Sbjct: 369 SRSQAEQRRGRTGRTCDGEVYRL-VPSAFFNKLEEHEPPSILKLSLRQQVL 418