Miyakogusa Predicted Gene

Lj1g3v4831820.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4831820.1 Non Chatacterized Hit- tr|I3T553|I3T553_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,98.97,0,GlnB-like,Nitrogen regulatory PII-like, alpha/beta;
PII_GLNB_DOM,Nitrogen regulatory protein PII; P-,CUFF.33415.1
         (195 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G01900.1 | Symbols: PII, GLB1 | GLNB1 homolog | chr4:821736-8...   224   4e-59

>AT4G01900.1 | Symbols: PII, GLB1 | GLNB1 homolog |
           chr4:821736-823294 FORWARD LENGTH=196
          Length = 196

 Score =  224 bits (570), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 121/198 (61%), Positives = 149/198 (75%), Gaps = 9/198 (4%)

Query: 1   MAIARTHMFGVVN--FQLNEAPMAFAGSSAIL--WHHGERSQRNVALRR-RGNAMIVPRI 55
           MA + T    + +  F  +   +AF+   +I   + H   S  ++  +    N+ ++P +
Sbjct: 1   MAASMTKPISITSLGFYSDRKNIAFSDCISICSGFRHSRPSCLDLVTKSPSNNSRVLPVV 60

Query: 56  RAQSSASEYVPDSKFYKVEAILRPWRVPLVSSALLNMGIRGVTVSDVRGFGAQGGSKERQ 115
            AQ S S+Y+PDSKFYKVEAI+RPWR+  VSSALL +GIRGVTVSDVRGFGAQGGS ER 
Sbjct: 61  SAQIS-SDYIPDSKFYKVEAIVRPWRIQQVSSALLKIGIRGVTVSDVRGFGAQGGSTERH 119

Query: 116 GGSEFSEDNFVAKVKMEIVVRNDQVEAVIDKIIEEARTGEIGDGKIFLIPVSDVIRVRTG 175
           GGSEFSED FVAKVKMEIVV+ DQVE+VI+ IIE ARTGEIGDGKIF++PVSDVIRVRTG
Sbjct: 120 GGSEFSEDKFVAKVKMEIVVKKDQVESVINTIIEGARTGEIGDGKIFVLPVSDVIRVRTG 179

Query: 176 ERGEQAERMTGGRTDILS 193
           ERGE+AE+MTG   D+LS
Sbjct: 180 ERGEKAEKMTG---DMLS 194