Miyakogusa Predicted Gene

Lj1g3v4830240.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4830240.1 Non Chatacterized Hit- tr|I1NBI4|I1NBI4_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.19533
PE,92.49,0,Prolyl-tRNA synthetase, C-terminal,Proline-tRNA ligase,
class II, C-terminal; Pro_tRNA_synth_type3,P,CUFF.33392.1
         (519 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G62120.2 | Symbols:  | Class II aaRS and biotin synthetases s...   880   0.0  
AT3G62120.1 | Symbols:  | Class II aaRS and biotin synthetases s...   880   0.0  
AT5G52520.1 | Symbols: OVA6, PRORS1 | Class II aaRS and biotin s...   401   e-112
AT5G10880.1 | Symbols:  | tRNA synthetase-related / tRNA ligase-...   294   9e-80

>AT3G62120.2 | Symbols:  | Class II aaRS and biotin synthetases
           superfamily protein | chr3:23001227-23003849 REVERSE
           LENGTH=530
          Length = 530

 Score =  880 bits (2275), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 413/484 (85%), Positives = 442/484 (91%), Gaps = 1/484 (0%)

Query: 36  LGLTHKKAENFGEWYSEVVVNSEMIEYYDISGCYILRPWSMAIWEIMQAFFDPEIKKMKI 95
           LGL+ KK ENFGEWYSEV    +MIEYYDISGCYILRPWSMAIWEIMQ FFD EIKKMK+
Sbjct: 48  LGLSVKKDENFGEWYSEVC-KQDMIEYYDISGCYILRPWSMAIWEIMQIFFDAEIKKMKV 106

Query: 96  KNCYFPLFVSPGVLQKEKDHVEGFAPEVAWVTKSGESELEIPIAIRPTSETVMYPYYSKW 155
           KNCYFPLFVSPGVL+KEKDH+EGFAPEVAWVTKSG+S+LE+PIAIRPTSETVMYPYYSKW
Sbjct: 107 KNCYFPLFVSPGVLEKEKDHIEGFAPEVAWVTKSGKSDLEVPIAIRPTSETVMYPYYSKW 166

Query: 156 IRGHRDLPLKLNQWCNVVRWEFSNPTPFIRSREFLWQEGHTAFATKEEADAEVLEILELY 215
           IRGHRDLPLKLNQWCNVVRWEFSNPTPFIRSREFLWQEGHTAFATK EAD EVL+ILELY
Sbjct: 167 IRGHRDLPLKLNQWCNVVRWEFSNPTPFIRSREFLWQEGHTAFATKAEADEEVLQILELY 226

Query: 216 RRIYEEYLAVPVIKGKKSALEKFAGGLYTTSVEAFIPNTGRGVQGATSHCLGQNFAEMFE 275
           RRIYEEYLAVPV+KG KS  EKFAGGLYTTSVEAFIPNTGRGVQGATSHCLGQNFA+MFE
Sbjct: 227 RRIYEEYLAVPVVKGMKSENEKFAGGLYTTSVEAFIPNTGRGVQGATSHCLGQNFAKMFE 286

Query: 276 INFENEKGEKAMAWQNSWAYSTRTIGVMVMVHGDDKGLVLPPKVASVQVIVIPVPFKDAN 335
           INFENEK E  M WQNSWAYSTRTIGVM+M HGDDKGLVLPPKVASVQV+VIPVP+KDAN
Sbjct: 287 INFENEKAETEMVWQNSWAYSTRTIGVMIMTHGDDKGLVLPPKVASVQVVVIPVPYKDAN 346

Query: 336 TQGIYDACAATVNTLCEAGIRAESDTRDNYSPGWKYSHWEMKGVPLRIEIGPKDLANKQV 395
           TQGIYDAC AT + LCEAGIRAE D RDNYSPGWKYS WEMKGVPLRIEIGP+DL N QV
Sbjct: 347 TQGIYDACTATASALCEAGIRAEEDLRDNYSPGWKYSDWEMKGVPLRIEIGPRDLENDQV 406

Query: 396 RAVRRDNGAKIDIANADLVEELKKLLDNIQQNLFDVAKQKRDECIQIIHTWDEFIQALNE 455
           R VRRDNG K DI    LVE +K+LL+ IQQN+++VAKQKR+ C+Q + TWDEFI+ALNE
Sbjct: 407 RTVRRDNGVKEDIPRGSLVEHVKELLEKIQQNMYEVAKQKREACVQEVKTWDEFIKALNE 466

Query: 456 KNMILAPWCDEEEVEADVKARTRGETGAAKTLCSPFDQPELPEGTKCFASGKPATKWSYW 515
           K +ILAPWCDEEEVE DVKART+GETGAAKTLCSPFDQPELPEGT CFASGKPA KW+YW
Sbjct: 467 KKLILAPWCDEEEVERDVKARTKGETGAAKTLCSPFDQPELPEGTLCFASGKPAKKWTYW 526

Query: 516 GRSY 519
           GRSY
Sbjct: 527 GRSY 530


>AT3G62120.1 | Symbols:  | Class II aaRS and biotin synthetases
           superfamily protein | chr3:23001227-23003849 REVERSE
           LENGTH=530
          Length = 530

 Score =  880 bits (2275), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 413/484 (85%), Positives = 442/484 (91%), Gaps = 1/484 (0%)

Query: 36  LGLTHKKAENFGEWYSEVVVNSEMIEYYDISGCYILRPWSMAIWEIMQAFFDPEIKKMKI 95
           LGL+ KK ENFGEWYSEV    +MIEYYDISGCYILRPWSMAIWEIMQ FFD EIKKMK+
Sbjct: 48  LGLSVKKDENFGEWYSEVC-KQDMIEYYDISGCYILRPWSMAIWEIMQIFFDAEIKKMKV 106

Query: 96  KNCYFPLFVSPGVLQKEKDHVEGFAPEVAWVTKSGESELEIPIAIRPTSETVMYPYYSKW 155
           KNCYFPLFVSPGVL+KEKDH+EGFAPEVAWVTKSG+S+LE+PIAIRPTSETVMYPYYSKW
Sbjct: 107 KNCYFPLFVSPGVLEKEKDHIEGFAPEVAWVTKSGKSDLEVPIAIRPTSETVMYPYYSKW 166

Query: 156 IRGHRDLPLKLNQWCNVVRWEFSNPTPFIRSREFLWQEGHTAFATKEEADAEVLEILELY 215
           IRGHRDLPLKLNQWCNVVRWEFSNPTPFIRSREFLWQEGHTAFATK EAD EVL+ILELY
Sbjct: 167 IRGHRDLPLKLNQWCNVVRWEFSNPTPFIRSREFLWQEGHTAFATKAEADEEVLQILELY 226

Query: 216 RRIYEEYLAVPVIKGKKSALEKFAGGLYTTSVEAFIPNTGRGVQGATSHCLGQNFAEMFE 275
           RRIYEEYLAVPV+KG KS  EKFAGGLYTTSVEAFIPNTGRGVQGATSHCLGQNFA+MFE
Sbjct: 227 RRIYEEYLAVPVVKGMKSENEKFAGGLYTTSVEAFIPNTGRGVQGATSHCLGQNFAKMFE 286

Query: 276 INFENEKGEKAMAWQNSWAYSTRTIGVMVMVHGDDKGLVLPPKVASVQVIVIPVPFKDAN 335
           INFENEK E  M WQNSWAYSTRTIGVM+M HGDDKGLVLPPKVASVQV+VIPVP+KDAN
Sbjct: 287 INFENEKAETEMVWQNSWAYSTRTIGVMIMTHGDDKGLVLPPKVASVQVVVIPVPYKDAN 346

Query: 336 TQGIYDACAATVNTLCEAGIRAESDTRDNYSPGWKYSHWEMKGVPLRIEIGPKDLANKQV 395
           TQGIYDAC AT + LCEAGIRAE D RDNYSPGWKYS WEMKGVPLRIEIGP+DL N QV
Sbjct: 347 TQGIYDACTATASALCEAGIRAEEDLRDNYSPGWKYSDWEMKGVPLRIEIGPRDLENDQV 406

Query: 396 RAVRRDNGAKIDIANADLVEELKKLLDNIQQNLFDVAKQKRDECIQIIHTWDEFIQALNE 455
           R VRRDNG K DI    LVE +K+LL+ IQQN+++VAKQKR+ C+Q + TWDEFI+ALNE
Sbjct: 407 RTVRRDNGVKEDIPRGSLVEHVKELLEKIQQNMYEVAKQKREACVQEVKTWDEFIKALNE 466

Query: 456 KNMILAPWCDEEEVEADVKARTRGETGAAKTLCSPFDQPELPEGTKCFASGKPATKWSYW 515
           K +ILAPWCDEEEVE DVKART+GETGAAKTLCSPFDQPELPEGT CFASGKPA KW+YW
Sbjct: 467 KKLILAPWCDEEEVERDVKARTKGETGAAKTLCSPFDQPELPEGTLCFASGKPAKKWTYW 526

Query: 516 GRSY 519
           GRSY
Sbjct: 527 GRSY 530


>AT5G52520.1 | Symbols: OVA6, PRORS1 | Class II aaRS and biotin
           synthetases superfamily protein | chr5:21311112-21313875
           FORWARD LENGTH=543
          Length = 543

 Score =  401 bits (1030), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 204/485 (42%), Positives = 297/485 (61%), Gaps = 17/485 (3%)

Query: 42  KAENFGEWYSEVVVNSEMIEYYDISGCYILRPWSMAIWEIMQAFFDPEIKKMKIKNCYFP 101
           ++++F  WY +V+ ++E+ +Y  + G  ++RP+  AIWE +Q + + + K+    N YFP
Sbjct: 69  RSQDFNAWYLDVIASAELADYGPVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNMYFP 128

Query: 102 LFVSPGVLQKEKDHVEGFAPEVAWVTKSGESELEIPIAIRPTSETVMYPYYSKWIRGHRD 161
            F+    ++KE  HVEGF+PE+A VT  G  ELE  + +RPTSET++   +++WI  +RD
Sbjct: 129 QFIPYSFIEKEASHVEGFSPELALVTVGGGKELEEKLVVRPTSETIVNHMFTQWIHSYRD 188

Query: 162 LPLKLNQWCNVVRWEFSNPTPFIRSREFLWQEGHTAFATKEEADAEVLEILELYRRIYEE 221
           LPL +NQW NV RWE     PFIR+ EFLWQEGHTA AT EEA+ E  +++E+Y R   E
Sbjct: 189 LPLMINQWANVTRWEMRT-KPFIRTLEFLWQEGHTAHATPEEAEKEAKQMIEIYTRFAFE 247

Query: 222 YLAVPVIKGKKSALEKFAGGLYTTSVEAFIPNTGRGVQGATSHCLGQNFAEMFEINFENE 281
             A+PVI G+KS LE FAG   T ++EA + +  + +Q  TSH LGQNF+  F   F +E
Sbjct: 248 QTAIPVIPGRKSKLETFAGADITYTIEAMMGDR-KALQAGTSHNLGQNFSRAFGTQFADE 306

Query: 282 KGEKAMAWQNSWAYSTRTIGVMVMVHGDDKGLVLPPKVASVQVIVIPVPFKDANTQGIYD 341
            GE+   WQ SWA STR +G ++M HGDD GL+LPPK+A +QV+++P+  KD    G+  
Sbjct: 307 NGERQHVWQTSWAVSTRFVGGIIMTHGDDTGLMLPPKIAPIQVVIVPIWKKDTEKTGVLS 366

Query: 342 ACAATVNTLCEAGIRAESDTRDNYSPGWKYSHWEMKGVPLRIEIGPKDLANKQVRAVRRD 401
           A ++    L  AG+R + D  D  +PGWK++ WEMKG+PLRIEIGP+D+++  V   RRD
Sbjct: 367 AASSVKEALQTAGVRVKLDDTDQRTPGWKFNFWEMKGIPLRIEIGPRDVSSNSVVVSRRD 426

Query: 402 NGAK------IDIANADLVEELKKLLDNIQQNLFDVAKQKRDECIQIIHTWDEFIQALNE 455
              K      I +  + LV  +K+ LD IQ +L + A   RD  I  ++++ E   A++ 
Sbjct: 427 VPGKAGKVFGISMEPSTLVAYVKEKLDEIQTSLLEKALSFRDSNIVDVNSYAELKDAISS 486

Query: 456 KNMILAPWCDEEEVEADVKARTRGETGAAKTLCSPFDQPELPEGTK-CFASGKPATKWSY 514
                 PW   +  E  VK     ETGA    C PF+Q    +GTK C  +G PA + + 
Sbjct: 487 GKWARGPWSASDADEQRVKE----ETGAT-IRCFPFEQ---TQGTKTCLMTGNPAEEVAI 538

Query: 515 WGRSY 519
           + +SY
Sbjct: 539 FAKSY 543


>AT5G10880.1 | Symbols:  | tRNA synthetase-related / tRNA
           ligase-related | chr5:3432693-3433867 FORWARD LENGTH=309
          Length = 309

 Score =  294 bits (753), Expect = 9e-80,   Method: Compositional matrix adjust.
 Identities = 144/221 (65%), Positives = 171/221 (77%), Gaps = 6/221 (2%)

Query: 305 MVHGDDKGLVLPPKVASVQVIVIPVPFKDA-NTQGIYDACAATVNTLCEAGIRAESDTRD 363
           M HGDDKGLV PPKVA VQV+VI VP K A + Q + DAC A  +TL  AGIRAE+D RD
Sbjct: 89  MTHGDDKGLVFPPKVAPVQVVVIHVPIKGAADYQELCDACEAVESTLLGAGIRAEADIRD 148

Query: 364 NYSPGWKYSHWEMKGVPLRIEIGPKDLANKQVRAVRRDNGAKIDIANADLVEELKKLLDN 423
           NYS GWKY+  E+ GVPLRIE GP+DLAN QVR V RDNGAK+D+   DL+E++K LL+ 
Sbjct: 149 NYSCGWKYADQELTGVPLRIETGPRDLANDQVRIVTRDNGAKMDVKRGDLIEQVKDLLEK 208

Query: 424 IQQNLFDVAKQKRDECIQIIHTWDEFIQALNEKNMILAPWCDEEEVEADVKARTRGE--- 480
           IQ NL+DVAK+K +EC Q + TWDEF++AL++K +ILAPWCD+ EVE DVK RTRG+   
Sbjct: 209 IQSNLYDVAKRKVEECTQKVETWDEFVEALSQKKLILAPWCDKVEVEKDVKRRTRGDETG 268

Query: 481 --TGAAKTLCSPFDQPELPEGTKCFASGKPATKWSYWGRSY 519
              G AKTLC+P +QPEL E T CFASGKPA KWSYWGRSY
Sbjct: 269 GGGGGAKTLCTPLEQPELGEETLCFASGKPAKKWSYWGRSY 309



 Score = 52.4 bits (124), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 22/43 (51%), Positives = 32/43 (74%), Gaps = 1/43 (2%)

Query: 36 LGLTHKKAENFGEWYSEVVVNSEMIEYYD-ISGCYILRPWSMA 77
          LG+T KK E+FG+WYSE     E++EYY+ + GCYIL+P  ++
Sbjct: 7  LGITAKKDEDFGKWYSEACRFGELVEYYESVKGCYILKPSGIS 49