Miyakogusa Predicted Gene

Lj1g3v4830120.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4830120.2 Non Chatacterized Hit- tr|K4AXF2|K4AXF2_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,37.84,0.00000000000002,seg,NULL; coiled-coil,NULL; SNF7 -
RELATED,NULL; Snf7,Snf7,CUFF.33366.2
         (337 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G62080.1 | Symbols:  | SNF7 family protein | chr3:22986383-22...   280   9e-76
AT3G62080.2 | Symbols:  | SNF7 family protein | chr3:22986191-22...   280   1e-75

>AT3G62080.1 | Symbols:  | SNF7 family protein |
           chr3:22986383-22988517 FORWARD LENGTH=423
          Length = 423

 Score =  280 bits (716), Expect = 9e-76,   Method: Compositional matrix adjust.
 Identities = 139/255 (54%), Positives = 195/255 (76%)

Query: 1   MRTLDLVDPRSGRVSQLFRKVGSLITKSATPPDIVAEEFVVVTAVLKDKAAEVVKHLSEN 60
           +R  DL DP SGR+++L R V +L+ +     + + E  +V+  +LK+KAA+VVK LSE 
Sbjct: 94  VRISDLDDPGSGRIARLLRTVKNLMVQQPVKQEEILENTLVLVPLLKEKAADVVKILSEG 153

Query: 61  HWNSSCIITMKKFQDVCGGPDEASVILRYLSGCRTAQYLSVHKKEFVEGVKISLSTAVLS 120
           HW S+C++T+KKF+++C G +EAS +L +LSGC  A  +S+++ E +EGVK+S S   L 
Sbjct: 154 HWTSTCVVTLKKFRNLCNGSNEASAVLSHLSGCGKAHKISINRGELIEGVKVSFSQTALP 213

Query: 121 SISNLDYDVLYLIWTTEKLQQQLDVIDRRYELSRKSALASLHSGNKEVALRYVRELKLIT 180
            IS LD D+L+L+ TTEKLQ QL+V+D+R E S+KSALASL SG+++VALR+ RELK++T
Sbjct: 214 GISTLDCDILHLLRTTEKLQDQLEVMDQRCEKSKKSALASLKSGHRKVALRHARELKVVT 273

Query: 181 QSREKCLSFLNRVEEVLSIISDAESTKKVSEAMQIGARAIKENKISVEDVDLCLRDLEES 240
           +SREKC S LNRVEEVL+ I+D+ESTK VSEA++ GAR +K+ KIS +DV   L +LEE+
Sbjct: 274 ESREKCTSLLNRVEEVLNTIADSESTKMVSEAIKTGARVMKDIKISADDVHDYLEELEET 333

Query: 241 IDSQKEVEKALEQTP 255
           I+SQK+VEKALE  P
Sbjct: 334 IESQKQVEKALESAP 348


>AT3G62080.2 | Symbols:  | SNF7 family protein |
           chr3:22986191-22988517 FORWARD LENGTH=462
          Length = 462

 Score =  280 bits (715), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 139/255 (54%), Positives = 195/255 (76%)

Query: 1   MRTLDLVDPRSGRVSQLFRKVGSLITKSATPPDIVAEEFVVVTAVLKDKAAEVVKHLSEN 60
           +R  DL DP SGR+++L R V +L+ +     + + E  +V+  +LK+KAA+VVK LSE 
Sbjct: 133 VRISDLDDPGSGRIARLLRTVKNLMVQQPVKQEEILENTLVLVPLLKEKAADVVKILSEG 192

Query: 61  HWNSSCIITMKKFQDVCGGPDEASVILRYLSGCRTAQYLSVHKKEFVEGVKISLSTAVLS 120
           HW S+C++T+KKF+++C G +EAS +L +LSGC  A  +S+++ E +EGVK+S S   L 
Sbjct: 193 HWTSTCVVTLKKFRNLCNGSNEASAVLSHLSGCGKAHKISINRGELIEGVKVSFSQTALP 252

Query: 121 SISNLDYDVLYLIWTTEKLQQQLDVIDRRYELSRKSALASLHSGNKEVALRYVRELKLIT 180
            IS LD D+L+L+ TTEKLQ QL+V+D+R E S+KSALASL SG+++VALR+ RELK++T
Sbjct: 253 GISTLDCDILHLLRTTEKLQDQLEVMDQRCEKSKKSALASLKSGHRKVALRHARELKVVT 312

Query: 181 QSREKCLSFLNRVEEVLSIISDAESTKKVSEAMQIGARAIKENKISVEDVDLCLRDLEES 240
           +SREKC S LNRVEEVL+ I+D+ESTK VSEA++ GAR +K+ KIS +DV   L +LEE+
Sbjct: 313 ESREKCTSLLNRVEEVLNTIADSESTKMVSEAIKTGARVMKDIKISADDVHDYLEELEET 372

Query: 241 IDSQKEVEKALEQTP 255
           I+SQK+VEKALE  P
Sbjct: 373 IESQKQVEKALESAP 387