Miyakogusa Predicted Gene

Lj1g3v4819990.3

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4819990.3 tr|B7ZXN4|B7ZXN4_MAIZE Glucose-1-phosphate
adenylyltransferase OS=Zea mays PE=2 SV=1,77.59,9e-19,no
description,NULL; GLUCOSE-1-PHOSPHATE ADENYLYLTRANSFERASE,NULL;
SUGAR-1-PHOSPHATE GUANYL TRANSFER,CUFF.33352.3
         (67 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G19220.1 | Symbols: ADG2, APL1 | ADP glucose pyrophosphorylas...    86   5e-18
AT2G21590.2 | Symbols: APL4 | Glucose-1-phosphate adenylyltransf...    84   2e-17
AT2G21590.1 | Symbols: APL4 | Glucose-1-phosphate adenylyltransf...    84   2e-17
AT4G39210.1 | Symbols: APL3 | Glucose-1-phosphate adenylyltransf...    84   3e-17
AT1G27680.1 | Symbols: APL2 | ADPGLC-PPase large subunit | chr1:...    82   5e-17
AT5G48300.1 | Symbols: ADG1, APS1 | ADP glucose pyrophosphorylas...    69   9e-13
AT1G05610.1 | Symbols: APS2 | ADP-glucose pyrophosphorylase smal...    63   4e-11

>AT5G19220.1 | Symbols: ADG2, APL1 | ADP glucose pyrophosphorylase
           large subunit 1 | chr5:6463931-6466775 REVERSE
           LENGTH=522
          Length = 522

 Score = 85.9 bits (211), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 40/58 (68%), Positives = 48/58 (82%)

Query: 10  NLTCRNCIIDKNARIGNNVIIANKENVQEADRPSEGFYIRSGITVVLKDSVISNGTII 67
           N   + CIIDKNAR+G NVIIAN E +QEADR S+GFYIRSGITV+LK+SVI +G +I
Sbjct: 465 NTKIQECIIDKNARVGKNVIIANSEGIQEADRSSDGFYIRSGITVILKNSVIKDGVVI 522


>AT2G21590.2 | Symbols: APL4 | Glucose-1-phosphate
           adenylyltransferase family protein |
           chr2:9239362-9242150 FORWARD LENGTH=523
          Length = 523

 Score = 84.0 bits (206), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 38/54 (70%), Positives = 46/54 (85%)

Query: 14  RNCIIDKNARIGNNVIIANKENVQEADRPSEGFYIRSGITVVLKDSVISNGTII 67
           R CIIDKNA+IG NVII NK +VQEADRP EGFYIRSGITV+++ + I +GT+I
Sbjct: 470 RKCIIDKNAKIGKNVIIMNKGDVQEADRPEEGFYIRSGITVIVEKATIQDGTVI 523


>AT2G21590.1 | Symbols: APL4 | Glucose-1-phosphate
           adenylyltransferase family protein |
           chr2:9239362-9242150 FORWARD LENGTH=523
          Length = 523

 Score = 84.0 bits (206), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 38/54 (70%), Positives = 46/54 (85%)

Query: 14  RNCIIDKNARIGNNVIIANKENVQEADRPSEGFYIRSGITVVLKDSVISNGTII 67
           R CIIDKNA+IG NVII NK +VQEADRP EGFYIRSGITV+++ + I +GT+I
Sbjct: 470 RKCIIDKNAKIGKNVIIMNKGDVQEADRPEEGFYIRSGITVIVEKATIQDGTVI 523


>AT4G39210.1 | Symbols: APL3 | Glucose-1-phosphate
           adenylyltransferase family protein |
           chr4:18260332-18263181 FORWARD LENGTH=521
          Length = 521

 Score = 83.6 bits (205), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 37/54 (68%), Positives = 47/54 (87%)

Query: 14  RNCIIDKNARIGNNVIIANKENVQEADRPSEGFYIRSGITVVLKDSVISNGTII 67
           R CIIDKNA+IG NV+I NK++V+EADRP EGFYIRSGITVV++ + I +GT+I
Sbjct: 468 RKCIIDKNAKIGKNVVIMNKDDVKEADRPEEGFYIRSGITVVVEKATIKDGTVI 521


>AT1G27680.1 | Symbols: APL2 | ADPGLC-PPase large subunit |
           chr1:9631630-9634450 FORWARD LENGTH=518
          Length = 518

 Score = 82.4 bits (202), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 36/55 (65%), Positives = 45/55 (81%)

Query: 10  NLTCRNCIIDKNARIGNNVIIANKENVQEADRPSEGFYIRSGITVVLKDSVISNG 64
           N   +NCIIDKNA+IG NV+IAN + V+E DRP EGF+IRSGITVVLK++ I +G
Sbjct: 461 NTKIKNCIIDKNAKIGKNVVIANADGVEEGDRPEEGFHIRSGITVVLKNATIRDG 515


>AT5G48300.1 | Symbols: ADG1, APS1 | ADP glucose pyrophosphorylase
           1 | chr5:19570326-19572557 FORWARD LENGTH=520
          Length = 520

 Score = 68.6 bits (166), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 32/58 (55%), Positives = 44/58 (75%)

Query: 10  NLTCRNCIIDKNARIGNNVIIANKENVQEADRPSEGFYIRSGITVVLKDSVISNGTII 67
           N   +  IIDKNARIG+NV I N +NVQEA R ++G++I+SGI  V+KD++I  GT+I
Sbjct: 463 NSHIKRAIIDKNARIGDNVKIINSDNVQEAARETDGYFIKSGIVTVIKDALIPTGTVI 520


>AT1G05610.1 | Symbols: APS2 | ADP-glucose pyrophosphorylase small
           subunit 2 | chr1:1673895-1675934 REVERSE LENGTH=476
          Length = 476

 Score = 62.8 bits (151), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 27/54 (50%), Positives = 43/54 (79%)

Query: 14  RNCIIDKNARIGNNVIIANKENVQEADRPSEGFYIRSGITVVLKDSVISNGTII 67
           R  I+DKNARIG NV+I N++NV+E +R ++G+ IR GI ++L+++VI N +I+
Sbjct: 423 RRAIVDKNARIGKNVMIINRDNVEEGNREAQGYVIREGIIIILRNAVIPNDSIL 476