Miyakogusa Predicted Gene
- Lj1g3v4819940.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v4819940.1 tr|F5CAD8|F5CAD8_FUNHY Pentatricopeptide repeat
protein 65 OS=Funaria hygrometrica PE=2
SV=1,29.49,2e-18,PPR_2,Pentatricopeptide repeat; PPR,Pentatricopeptide
repeat; PPR_1,Pentatricopeptide repeat; PPR: p,CUFF.33348.1
(390 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 244 6e-65
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 243 1e-64
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 243 2e-64
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 238 4e-63
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 238 8e-63
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 234 6e-62
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 234 6e-62
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 233 1e-61
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 232 3e-61
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 231 8e-61
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 230 1e-60
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 228 5e-60
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 228 7e-60
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 226 2e-59
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 226 2e-59
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 226 3e-59
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 225 3e-59
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 225 4e-59
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 225 4e-59
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 224 7e-59
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 223 1e-58
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 221 6e-58
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 220 1e-57
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 220 2e-57
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 219 2e-57
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 219 2e-57
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 218 4e-57
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 216 2e-56
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 216 2e-56
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 216 2e-56
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 215 4e-56
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 214 6e-56
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 212 3e-55
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 212 4e-55
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 211 7e-55
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 211 7e-55
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 210 1e-54
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 209 4e-54
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 208 4e-54
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 208 5e-54
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 208 5e-54
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 207 1e-53
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 206 2e-53
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 206 3e-53
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 206 3e-53
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 206 3e-53
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 206 3e-53
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 206 3e-53
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 205 5e-53
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 205 6e-53
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 204 6e-53
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 204 8e-53
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 204 1e-52
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 203 1e-52
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 203 1e-52
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 202 3e-52
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 201 5e-52
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 201 6e-52
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 201 7e-52
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 201 9e-52
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 201 1e-51
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 200 1e-51
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 200 1e-51
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 200 2e-51
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 199 2e-51
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 199 2e-51
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 199 4e-51
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 198 5e-51
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 198 6e-51
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 198 7e-51
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 197 8e-51
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 197 8e-51
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 197 1e-50
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 196 3e-50
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 195 4e-50
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 195 5e-50
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 194 7e-50
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 193 1e-49
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 193 1e-49
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 193 2e-49
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 192 3e-49
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 192 4e-49
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 192 4e-49
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 192 4e-49
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 192 4e-49
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 191 6e-49
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 191 6e-49
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 191 7e-49
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 190 2e-48
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 189 2e-48
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 188 5e-48
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 188 5e-48
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 187 7e-48
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 187 1e-47
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 187 1e-47
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 186 3e-47
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 185 4e-47
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 185 5e-47
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 185 5e-47
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 184 8e-47
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 184 8e-47
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 184 1e-46
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 184 1e-46
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 184 1e-46
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 184 1e-46
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 183 2e-46
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 183 2e-46
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 183 2e-46
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 182 3e-46
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 182 4e-46
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 182 5e-46
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 181 7e-46
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 181 8e-46
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 181 8e-46
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 181 9e-46
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 181 9e-46
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 180 1e-45
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 180 1e-45
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 179 2e-45
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 179 2e-45
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 179 3e-45
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 179 3e-45
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 179 3e-45
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 179 4e-45
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 179 4e-45
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 177 9e-45
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 177 1e-44
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 176 2e-44
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 176 4e-44
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 175 4e-44
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 175 5e-44
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 174 9e-44
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 174 1e-43
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 174 1e-43
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 174 1e-43
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 173 2e-43
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 171 6e-43
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 171 7e-43
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 171 8e-43
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 169 2e-42
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 169 2e-42
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 169 3e-42
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 169 3e-42
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 169 3e-42
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 169 3e-42
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 168 7e-42
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 167 9e-42
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 167 1e-41
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 167 1e-41
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 166 2e-41
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 166 3e-41
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 166 3e-41
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 165 4e-41
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 165 4e-41
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 165 5e-41
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 165 5e-41
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 165 6e-41
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 164 1e-40
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 163 1e-40
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 163 2e-40
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 163 2e-40
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 163 2e-40
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 162 3e-40
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 162 4e-40
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 160 1e-39
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 160 1e-39
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 160 1e-39
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 159 2e-39
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 158 5e-39
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 157 9e-39
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 157 1e-38
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 156 2e-38
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 156 2e-38
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 155 5e-38
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 154 1e-37
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 154 1e-37
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 154 1e-37
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 154 1e-37
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 152 3e-37
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 152 5e-37
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 152 5e-37
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 151 6e-37
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 150 1e-36
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 150 1e-36
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 150 2e-36
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 149 2e-36
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 146 2e-35
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 146 2e-35
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 146 2e-35
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 146 3e-35
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 145 5e-35
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 145 7e-35
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 144 9e-35
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 138 6e-33
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 137 1e-32
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 137 2e-32
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 135 4e-32
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 127 9e-30
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 124 8e-29
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 9e-29
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 117 1e-26
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 109 3e-24
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 7e-24
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 100 1e-21
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 2e-20
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 2e-19
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 93 3e-19
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 93 3e-19
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 6e-19
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 1e-18
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 1e-18
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 2e-18
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 89 4e-18
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 89 6e-18
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 9e-18
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 9e-18
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 1e-17
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 1e-17
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 4e-17
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 4e-17
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 85 7e-17
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 85 1e-16
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 84 2e-16
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 2e-16
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 84 2e-16
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 3e-16
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 3e-16
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 7e-16
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 7e-16
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 8e-16
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 1e-15
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 1e-15
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 81 1e-15
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 1e-15
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 81 1e-15
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 81 2e-15
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 81 2e-15
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 3e-15
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 80 3e-15
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 4e-15
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 4e-15
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 4e-15
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 5e-15
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 5e-15
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 5e-15
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 7e-15
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 79 8e-15
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 78 9e-15
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 78 9e-15
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 78 9e-15
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 2e-14
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 4e-14
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 4e-14
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 76 4e-14
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 4e-14
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 5e-14
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 5e-14
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 6e-14
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 75 7e-14
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 7e-14
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 7e-14
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 8e-14
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 9e-14
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 1e-13
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 2e-13
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 73 3e-13
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 3e-13
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 4e-13
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 4e-13
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 4e-13
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 5e-13
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 5e-13
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 5e-13
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 5e-13
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 6e-13
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 6e-13
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 7e-13
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 72 7e-13
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 7e-13
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 8e-13
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 9e-13
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 9e-13
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 1e-12
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 1e-12
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 1e-12
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 1e-12
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 71 1e-12
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 71 2e-12
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 2e-12
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 2e-12
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 2e-12
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 2e-12
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 2e-12
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 2e-12
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 69 4e-12
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 69 4e-12
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 8e-12
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 68 9e-12
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 9e-12
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 9e-12
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 68 1e-11
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 67 1e-11
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 4e-11
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 4e-11
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 4e-11
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 4e-11
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 66 4e-11
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 5e-11
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 6e-11
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 6e-11
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 6e-11
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 7e-11
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 8e-11
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 9e-11
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 65 1e-10
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 65 1e-10
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 1e-10
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 64 2e-10
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 2e-10
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 63 3e-10
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 4e-10
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 6e-10
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 62 6e-10
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 8e-10
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 61 1e-09
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 1e-09
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 1e-09
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 1e-09
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 2e-09
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 60 2e-09
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 5e-09
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 5e-09
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 58 1e-08
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 1e-08
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 56 3e-08
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 4e-08
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 56 4e-08
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 4e-08
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 56 5e-08
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 56 5e-08
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 6e-08
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 55 7e-08
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 8e-08
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 8e-08
AT5G36300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 9e-08
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 9e-08
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 53 4e-07
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 4e-07
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 4e-07
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 5e-07
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 5e-07
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 7e-07
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 7e-07
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 8e-07
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 8e-07
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 8e-07
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 51 1e-06
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 51 2e-06
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 2e-06
AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 4e-06
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 5e-06
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 6e-06
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 7e-06
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 7e-06
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 7e-06
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 49 7e-06
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 244 bits (624), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 137/382 (35%), Positives = 225/382 (58%), Gaps = 15/382 (3%)
Query: 4 YSKLHRTGVPFDSFCIVFTLKSC---TSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLL 60
+S + GV + + L C TS +L + LH + KLG H+ V ++
Sbjct: 59 FSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGDL--LHGYACKLGLDRNHVMVGTAII 116
Query: 61 NAYVLLS-FLDACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSS 119
Y F A ++FD M ++N+VTWNTMI GY RSG V A ++F++ P+RD +S ++
Sbjct: 117 GMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTA 176
Query: 120 MISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIV 179
MI+ + G ++ L FR + + G+KPD V A L+ C ++G+L G VH +++
Sbjct: 177 MINGFVKKGYQEEALLWFREMQI-SGVKPDYVAIIAALNACTNLGALSF--GLWVHRYVL 233
Query: 180 KNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALV 239
++ N + +L+++Y + G + A VF M +R V+SW ++I G A G E+LV
Sbjct: 234 SQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLV 293
Query: 240 VFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIE-DYGMEPKVHHYASLVYLV 298
F KM+ G +P+ +TFTG L+AC+H GLVEEG RYF++++ DY + P++ HY LV L
Sbjct: 294 YFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMKCDYRISPRIEHYGCLVDLY 353
Query: 299 GKSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEH-KQFEMAERVIEQVLRM-VKPEDDR 356
++GRLE+A +++++M ++PN VV GS L+AC H +AER+++ + + VK +
Sbjct: 354 SRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNHGNNIVLAERLMKHLTDLNVKSHSN- 412
Query: 357 GIYRLIHDLYVMGEKWEEAAKL 378
Y ++ ++Y KWE A+K+
Sbjct: 413 --YVILSNMYAADGKWEGASKM 432
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 121/285 (42%), Gaps = 68/285 (23%)
Query: 76 DEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLS 135
++ + TV+W + I +R+G + A + F +
Sbjct: 29 NQSTSETTVSWTSRINLLTRNGRLAEAAKEFSD--------------------------- 61
Query: 136 LFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELN-AELGATLV 194
+ G++P+ +T A+LSGC S G +HG+ K G + N +G ++
Sbjct: 62 -----MTLAGVEPNHITFIALLSGCGDFTSGSEALGDLLHGYACKLGLDRNHVMVGTAII 116
Query: 195 NMYAKGGVLR-------------------------------NAAMVFELMVERNVLSWTA 223
MY+K G + NAA +F+ M ER+++SWTA
Sbjct: 117 GMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTA 176
Query: 224 LICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYG 283
+I G + G+ EEAL+ F +M+++GV+P+ + L+AC + G + G + +
Sbjct: 177 MINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQD 236
Query: 284 MEPKVHHYASLVYLVGKSGRLEEAYEIIKTMK----VEPNVVVFG 324
+ V SL+ L + G +E A ++ M+ V N V+ G
Sbjct: 237 FKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVG 281
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 243 bits (621), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 135/381 (35%), Positives = 226/381 (59%), Gaps = 10/381 (2%)
Query: 1 MHLYSKLHRTGVPF-DSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCL 59
+ +Y +L R D F F KSC S L S + + +H H+ K G H+ N L
Sbjct: 93 IRIYKQLLRKSFELPDRFTFPFMFKSCAS-LGSCYLGKQVHGHLCKFG-PRFHVVTENAL 150
Query: 60 LNAYVLLS-FLDACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLS 118
++ Y+ +DA +FDEM R+ ++WN+++ GY+R G +++A+ +F + VS +
Sbjct: 151 IDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWT 210
Query: 119 SMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFI 178
+MIS Y IG + + FR + L GI+PD+++ +VL CA +GSL L GK +H +
Sbjct: 211 AMISGYTGIGCYVEAMDFFREMQL-AGIEPDEISLISVLPSCAQLGSLEL--GKWIHLYA 267
Query: 179 VKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEAL 238
+ G+ + L+ MY+K GV+ A +F M ++V+SW+ +I G A G A+
Sbjct: 268 ERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAI 327
Query: 239 VVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMI-EDYGMEPKVHHYASLVYL 297
F +M+ A V+PN +TF G+LSAC+H G+ +EG RYF M+ +DY +EPK+ HY L+ +
Sbjct: 328 ETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDV 387
Query: 298 VGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPEDDRG 357
+ ++G+LE A EI KTM ++P+ ++GS LS+C+ ++A ++ ++ + +PE D G
Sbjct: 388 LARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLVEL-EPE-DMG 445
Query: 358 IYRLIHDLYVMGEKWEEAAKL 378
Y L+ ++Y KWE+ ++L
Sbjct: 446 NYVLLANIYADLGKWEDVSRL 466
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 127/287 (44%), Gaps = 35/287 (12%)
Query: 98 DVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVL 157
D+ A +F + + +S+I AY + + +++++L PD+ T +
Sbjct: 57 DMDYATRLFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMF 116
Query: 158 SGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERN 217
CA +GS L GK VHG + K G + L++MY K L +A VF+ M ER+
Sbjct: 117 KSCASLGSCYL--GKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERD 174
Query: 218 VLSWTALICGAAQWGFCE-------------------------------EALVVFEKMRV 246
V+SW +L+ G A+ G + EA+ F +M++
Sbjct: 175 VISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQL 234
Query: 247 AGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEE 306
AG+ P+E++ VL +CA G +E G+ E G + +L+ + K G + +
Sbjct: 235 AGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQ 294
Query: 307 AYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRM-VKP 352
A ++ M+ + +V+ + + +S H A ++ R VKP
Sbjct: 295 AIQLFGQMEGK-DVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKP 340
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 243 bits (619), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 128/377 (33%), Positives = 228/377 (60%), Gaps = 9/377 (2%)
Query: 3 LYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLLNA 62
LY ++ + P +++ LK+C S+L + +HA I KLG+ ++ N L+N+
Sbjct: 102 LYQRMLCSSAPHNAYTFPSLLKAC-SNLSAFEETTQIHAQITKLGYE-NDVYAVNSLINS 159
Query: 63 YVLL-SFLDACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMI 121
Y + +F A +LFD +P + V+WN++I GY ++G + A +F + +++++S ++MI
Sbjct: 160 YAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMI 219
Query: 122 SAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKN 181
S Y +K+ L LF + ++PD V+ LS CA +G+L GK +H ++ K
Sbjct: 220 SGYVQADMNKEALQLFHE-MQNSDVEPDNVSLANALSACAQLGALE--QGKWIHSYLNKT 276
Query: 182 GWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVF 241
+++ LG L++MYAK G + A VF+ + +++V +WTALI G A G EA+ F
Sbjct: 277 RIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKF 336
Query: 242 EKMRVAGVRPNELTFTGVLSACAHAGLVEEGRR-YFKMIEDYGMEPKVHHYASLVYLVGK 300
+M+ G++PN +TFT VL+AC++ GLVEEG+ ++ M DY ++P + HY +V L+G+
Sbjct: 337 MEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGR 396
Query: 301 SGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPEDDRGIYR 360
+G L+EA I+ M ++PN V++G+ L AC+ HK E+ E + E ++ + R +++
Sbjct: 397 AGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEILIAIDPYHGGRYVHK 456
Query: 361 LIHDLYVMGEKWEEAAK 377
+++ M +KW++AA+
Sbjct: 457 A--NIHAMDKKWDKAAE 471
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 238 bits (608), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 134/377 (35%), Positives = 217/377 (57%), Gaps = 11/377 (2%)
Query: 3 LYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLLNA 62
+Y KL D+F F LK + + + +H ++ GF + +HV L+
Sbjct: 103 VYRKLWALCAKPDTFTFPFVLKIAV-RVSDVWFGRQIHGQVVVFGF-DSSVHVVTGLIQM 160
Query: 63 YVLLSFL-DACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAP--QRDSVSLSS 119
Y L DA +FDEM ++ WN ++ GY + G++ AR + E P R+ VS +
Sbjct: 161 YFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTC 220
Query: 120 MISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIV 179
+IS Y G + + + +F+R+L+ E ++PD+VT AVLS CA +GSL L G+ + ++
Sbjct: 221 VISGYAKSGRASEAIEVFQRMLM-ENVEPDEVTLLAVLSACADLGSLEL--GERICSYVD 277
Query: 180 KNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALV 239
G L +++MYAK G + A VFE + ERNV++WT +I G A G EAL
Sbjct: 278 HRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALA 337
Query: 240 VFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFK-MIEDYGMEPKVHHYASLVYLV 298
+F +M AGVRPN++TF +LSAC+H G V+ G+R F M YG+ P + HY ++ L+
Sbjct: 338 MFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLL 397
Query: 299 GKSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPEDDRGI 358
G++G+L EA E+IK+M + N ++GS L+A H E+ ER + +++++ +P ++ G
Sbjct: 398 GRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLELGERALSELIKL-EP-NNSGN 455
Query: 359 YRLIHDLYVMGEKWEEA 375
Y L+ +LY +W+E+
Sbjct: 456 YMLLANLYSNLGRWDES 472
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 238 bits (606), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 136/411 (33%), Positives = 223/411 (54%), Gaps = 42/411 (10%)
Query: 1 MHLYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLL 60
+ LY ++ R V S+ +K+ + + + L AHI K GF H+ + L+
Sbjct: 856 LELYVRMLRDSVSPSSYTYSSLVKASS---FASRFGESLQAHIWKFGFG-FHVKIQTTLI 911
Query: 61 NAYVLLSFL-DACILFDEMPNRNTVTWNTMIVGYSRS----------------------- 96
+ Y + +A +FDEMP R+ + W TM+ Y R
Sbjct: 912 DFYSATGRIREARKVFDEMPERDDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEATSNC 971
Query: 97 --------GDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKP 148
G++++A +F + P +D +S ++MI Y+ ++ +++F + ++ EGI P
Sbjct: 972 LINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYK-MMEEGIIP 1030
Query: 149 DQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAM 208
D+VT V+S CAH+G L + GK VH + ++NG+ L+ +G+ LV+MY+K G L A +
Sbjct: 1031 DEVTMSTVISACAHLGVLEI--GKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALL 1088
Query: 209 VFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGL 268
VF + ++N+ W ++I G A GF +EAL +F KM + V+PN +TF V +AC HAGL
Sbjct: 1089 VFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGL 1148
Query: 269 VEEGRR-YFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFL 327
V+EGRR Y MI+DY + V HY +V+L K+G + EA E+I M+ EPN V++G+ L
Sbjct: 1149 VDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALL 1208
Query: 328 SACKEHKQFEMAERVIEQVLRMVKPEDDRGIYRLIHDLYVMGEKWEEAAKL 378
C+ HK +AE ++ MV + G Y L+ +Y +W + A++
Sbjct: 1209 DGCRIHKNLVIAEIAFNKL--MVLEPMNSGYYFLLVSMYAEQNRWRDVAEI 1257
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 66/295 (22%), Positives = 108/295 (36%), Gaps = 101/295 (34%)
Query: 132 QGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGA 191
+ L L+ R +L + + P T +++ S G+S+ I K G+ + ++
Sbjct: 854 RSLELYVR-MLRDSVSPSSYTYSSLVKA----SSFASRFGESLQAHIWKFGFGFHVKIQT 908
Query: 192 TLVNMYAKGGVLRNAAMVFELMVERNVLSWTA---------------------------- 223
TL++ Y+ G +R A VF+ M ER+ ++WT
Sbjct: 909 TLIDFYSATGRIREARKVFDEMPERDDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEAT 968
Query: 224 ---LICGAAQWGFCEEALVVFEKMRVA-------------------------------GV 249
LI G G E+A +F +M V G+
Sbjct: 969 SNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGI 1028
Query: 250 RPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLE---- 305
P+E+T + V+SACAH G++E G+ G V+ ++LV + K G LE
Sbjct: 1029 IPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALL 1088
Query: 306 ---------------------------EAYEIIKTMKVE---PNVVVFGSFLSAC 330
EA ++ M++E PN V F S +AC
Sbjct: 1089 VFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTAC 1143
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 234 bits (598), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 126/324 (38%), Positives = 201/324 (62%), Gaps = 7/324 (2%)
Query: 57 NCLLNAYVLLSFLD-ACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSV 115
N +L YV ++ A LFD MP RN TWNTMI GY++ G + A+ +F++ P+RD V
Sbjct: 316 NAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPV 375
Query: 116 SLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVH 175
S ++MI+ Y+ G S + L LF + + EG + ++ + + LS CA + +L L GK +H
Sbjct: 376 SWAAMIAGYSQSGHSFEALRLFVQ-MEREGGRLNRSSFSSALSTCADVVALEL--GKQLH 432
Query: 176 GFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCE 235
G +VK G+E +G L+ MY K G + A +F+ M ++++SW +I G ++ GF E
Sbjct: 433 GRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGE 492
Query: 236 EALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYF-KMIEDYGMEPKVHHYASL 294
AL FE M+ G++P++ T VLSAC+H GLV++GR+YF M +DYG+ P HYA +
Sbjct: 493 VALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACM 552
Query: 295 VYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPED 354
V L+G++G LE+A+ ++K M EP+ ++G+ L A + H E+AE +++ M +PE+
Sbjct: 553 VDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAM-EPEN 611
Query: 355 DRGIYRLIHDLYVMGEKWEEAAKL 378
G+Y L+ +LY +W + KL
Sbjct: 612 S-GMYVLLSNLYASSGRWGDVGKL 634
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 154/300 (51%), Gaps = 14/300 (4%)
Query: 57 NCLLNAYVLLS-FLDACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSV 115
NCLL +V ++A FD M R+ V+WNT+I GY++SG + AR++F+E+P +D
Sbjct: 223 NCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVF 282
Query: 116 SLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVH 175
+ ++M+S Y ++ LF ++ + ++V+ A+L+G G +A +
Sbjct: 283 TWTAMVSGYIQNRMVEEARELFDKM-----PERNEVSWNAMLAGYVQ-GERMEMAKELFD 336
Query: 176 GFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCE 235
+N N T++ YA+ G + A +F+ M +R+ +SW A+I G +Q G
Sbjct: 337 VMPCRNVSTWN-----TMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSF 391
Query: 236 EALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLV 295
EAL +F +M G R N +F+ LS CA +E G++ + G E +L+
Sbjct: 392 EALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALL 451
Query: 296 YLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRM-VKPED 354
+ K G +EEA ++ K M ++V + + ++ H E+A R E + R +KP+D
Sbjct: 452 LMYCKCGSIEEANDLFKEM-AGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDD 510
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 131/278 (47%), Gaps = 30/278 (10%)
Query: 74 LFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQG 133
LFDEMP R+ V+WN MI GY R+ ++ +ARE+FE P+RD S ++M+S Y G
Sbjct: 117 LFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDA 176
Query: 134 LSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWEL---NAELG 190
S+F R+ + + V+ A+LS + ++ F + W L N LG
Sbjct: 177 RSVFDRM-----PEKNDVSWNALLSAYVQNSKM----EEACMLFKSRENWALVSWNCLLG 227
Query: 191 ATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVR 250
+ K + A F+ M R+V+SW +I G AQ G +EA +F++ V V
Sbjct: 228 G-----FVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDV- 281
Query: 251 PNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVG--KSGRLEEAY 308
T+T ++S +VEE R F + P+ + + L G + R+E A
Sbjct: 282 ---FTWTAMVSGYIQNRMVEEARELFDKM------PERNEVSWNAMLAGYVQGERMEMAK 332
Query: 309 EIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQV 346
E+ M NV + + ++ + + A+ + +++
Sbjct: 333 ELFDVMPCR-NVSTWNTMITGYAQCGKISEAKNLFDKM 369
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 137/281 (48%), Gaps = 32/281 (11%)
Query: 70 DACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAY---NN 126
+A +F MP ++V++N MI GY R+G+ + AR++F+E P+RD VS + MI Y N
Sbjct: 82 EALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRN 141
Query: 127 IGSSKQGLSLFRRVLLFEGIKP--DQVTAGAVLSGCAHMGSLGLLAGKSVHGFIV-KNGW 183
+G +++ LFE I P D + +LSG A G + +SV + KN
Sbjct: 142 LGKARE---------LFE-IMPERDVCSWNTMLSGYAQNGCVD--DARSVFDRMPEKNDV 189
Query: 184 ELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEK 243
NA L A Y + + A M+F+ ++SW L+ G + EA F+
Sbjct: 190 SWNALLSA-----YVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDS 244
Query: 244 MRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGR 303
M V V +++ +++ A +G ++E R+ F D V + ++V ++
Sbjct: 245 MNVRDV----VSWNTIITGYAQSGKIDEARQLF----DESPVQDVFTWTAMVSGYIQNRM 296
Query: 304 LEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIE 344
+EEA E+ M E N V + + L+ + ++ EMA+ + +
Sbjct: 297 VEEARELFDKMP-ERNEVSWNAMLAGYVQGERMEMAKELFD 336
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 133/293 (45%), Gaps = 25/293 (8%)
Query: 86 WNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEG 145
WN I Y R+G A VF+ P+ SVS + MIS Y + G R L E
Sbjct: 67 WNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGY-----LRNGEFELARKLFDEM 121
Query: 146 IKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRN 205
+ D V+ ++ G +L GK+ F + E + T+++ YA+ G + +
Sbjct: 122 PERDLVSWNVMIKGYVRNRNL----GKARELFEIMP--ERDVCSWNTMLSGYAQNGCVDD 175
Query: 206 AAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAH 265
A VF+ M E+N +SW AL+ Q EEA ++F+ + +++ +L
Sbjct: 176 ARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWAL----VSWNCLLGGFVK 231
Query: 266 AGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGS 325
+ E R++F D V + +++ +SG+++EA ++ V+ +V + +
Sbjct: 232 KKKIVEARQFF----DSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQ-DVFTWTA 286
Query: 326 FLSACKEHKQFEMAERVIEQVLRMVKPEDDRGIYRLIHDLYVMGEKWEEAAKL 378
+S +++ E A + +++ PE + + + YV GE+ E A +L
Sbjct: 287 MVSGYIQNRMVEEARELFDKM-----PERNEVSWNAMLAGYVQGERMEMAKEL 334
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 234 bits (598), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 135/443 (30%), Positives = 235/443 (53%), Gaps = 73/443 (16%)
Query: 3 LYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLLNA 62
++S++ R G+ D+F F LK+C+ L +++ +H HI KLG + + ++V N L++
Sbjct: 104 VFSEMQRFGLFADNFTYPFLLKACSGQ-SWLPVVKMMHNHIEKLGLS-SDIYVPNALIDC 161
Query: 63 YVLLSFL----------------------------------DACILFDEMPNRNTVTWNT 88
Y L DA LFDEMP R+ ++WNT
Sbjct: 162 YSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARRLFDEMPQRDLISWNT 221
Query: 89 MIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRV-------- 140
M+ GY+R ++ +A E+FE+ P+R++VS S+M+ Y+ G + +F ++
Sbjct: 222 MLDGYARCREMSKAFELFEKMPERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVV 281
Query: 141 ------------------------LLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHG 176
++ G+K D ++L+ C G L L G +H
Sbjct: 282 TWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSL--GMRIHS 339
Query: 177 FIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEE 236
+ ++ NA + L++MYAK G L+ A VF + +++++SW ++ G G +E
Sbjct: 340 ILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKE 399
Query: 237 ALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIED-YGMEPKVHHYASLV 295
A+ +F +MR G+RP+++TF VL +C HAGL++EG YF +E Y + P+V HY LV
Sbjct: 400 AIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLV 459
Query: 296 YLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPEDD 355
L+G+ GRL+EA ++++TM +EPNVV++G+ L AC+ H + ++A+ V++ ++++ D
Sbjct: 460 DLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGACRMHNEVDIAKEVLDNLVKL--DPCD 517
Query: 356 RGIYRLIHDLYVMGEKWEEAAKL 378
G Y L+ ++Y E WE A +
Sbjct: 518 PGNYSLLSNIYAAAEDWEGVADI 540
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 233 bits (595), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 132/371 (35%), Positives = 220/371 (59%), Gaps = 16/371 (4%)
Query: 15 DSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVA--NCLLNAYV--LLSFLD 70
+ F LKS T +L S +H H+ K GF HL+V LL++Y +
Sbjct: 125 NHFIYPLVLKS-TPYLSSAFSTPLVHTHLFKSGF---HLYVVVQTALLHSYASSVSHITL 180
Query: 71 ACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSS 130
A LFDEM RN V+W M+ GY+RSGD+ A +FE+ P+RD S +++++A G
Sbjct: 181 ARQLFDEMSERNVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLF 240
Query: 131 KQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELG 190
+ +SLFRR++ I+P++VT VLS CA G+L L K +H F + + +
Sbjct: 241 LEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQL--AKGIHAFAYRRDLSSDVFVS 298
Query: 191 ATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFE---KMRVA 247
+LV++Y K G L A+ VF++ ++++ +W ++I A G EEA+ VFE K+ +
Sbjct: 299 NSLVDLYGKCGNLEEASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNIN 358
Query: 248 GVRPNELTFTGVLSACAHAGLVEEGRRYFKMIED-YGMEPKVHHYASLVYLVGKSGRLEE 306
++P+ +TF G+L+AC H GLV +GR YF ++ + +G+EP++ HY L+ L+G++GR +E
Sbjct: 359 DIKPDHITFIGLLNACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDE 418
Query: 307 AYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPEDDRGIYRLIHDLY 366
A E++ TMK++ + ++GS L+ACK H ++AE ++ ++ + P ++ G ++ +LY
Sbjct: 419 ALEVMSTMKMKADEAIWGSLLNACKIHGHLDLAEVAVKNLVAL-NP-NNGGYVAMMANLY 476
Query: 367 VMGEKWEEAAK 377
WEEA +
Sbjct: 477 GEMGNWEEARR 487
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 232 bits (592), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 132/380 (34%), Positives = 221/380 (58%), Gaps = 15/380 (3%)
Query: 3 LYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLLNA 62
LY +L + + + F LKSC++ L +H H++K G +VA L++
Sbjct: 117 LYVQLLSSEINPNEFTFSSLLKSCSTKSGKL-----IHTHVLKFGLG-IDPYVATGLVDV 170
Query: 63 YVLL-SFLDACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMI 121
Y + A +FD MP R+ V+ MI Y++ G+V+ AR +F+ +RD VS + MI
Sbjct: 171 YAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMI 230
Query: 122 SAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKN 181
Y G L LF+++L KPD++T A LS C+ +G+L G+ +H F+ +
Sbjct: 231 DGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALE--TGRWIHVFVKSS 288
Query: 182 GWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVF 241
LN ++ L++MY+K G L A +VF +++++W A+I G A G+ ++AL +F
Sbjct: 289 RIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLF 348
Query: 242 EKMR-VAGVRPNELTFTGVLSACAHAGLVEEGRRYFK-MIEDYGMEPKVHHYASLVYLVG 299
+M+ + G++P ++TF G L ACAHAGLV EG R F+ M ++YG++PK+ HY LV L+G
Sbjct: 349 NEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLG 408
Query: 300 KSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRM-VKPEDDRGI 358
++G+L+ AYE IK M ++ + V++ S L +CK H F + + + E ++ + +K + GI
Sbjct: 409 RAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIK---NSGI 465
Query: 359 YRLIHDLYVMGEKWEEAAKL 378
Y L+ ++Y +E AK+
Sbjct: 466 YVLLSNIYASVGDYEGVAKV 485
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 231 bits (588), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 134/380 (35%), Positives = 221/380 (58%), Gaps = 8/380 (2%)
Query: 1 MHLYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLL 60
+ L+ K+ V +V L +C + + +L + + ++I + +L +AN +L
Sbjct: 217 LELFKKMESEDVKASHVTMVGVLSAC-AKIRNLEFGRQVCSYI-EENRVNVNLTLANAML 274
Query: 61 NAYVLL-SFLDACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSS 119
+ Y S DA LFD M ++ VTW TM+ GY+ S D + AREV PQ+D V+ ++
Sbjct: 275 DMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNA 334
Query: 120 MISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIV 179
+ISAY G + L +F + L + +K +Q+T + LS CA +G+L L G+ +H +I
Sbjct: 335 LISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALEL--GRWIHSYIK 392
Query: 180 KNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALV 239
K+G +N + + L++MY+K G L + VF + +R+V W+A+I G A G EA+
Sbjct: 393 KHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVD 452
Query: 240 VFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIE-DYGMEPKVHHYASLVYLV 298
+F KM+ A V+PN +TFT V AC+H GLV+E F +E +YG+ P+ HYA +V ++
Sbjct: 453 MFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVL 512
Query: 299 GKSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPEDDRGI 358
G+SG LE+A + I+ M + P+ V+G+ L ACK H +AE ++L + +P +D G
Sbjct: 513 GRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLEL-EPRND-GA 570
Query: 359 YRLIHDLYVMGEKWEEAAKL 378
+ L+ ++Y KWE ++L
Sbjct: 571 HVLLSNIYAKLGKWENVSEL 590
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 130/261 (49%), Gaps = 35/261 (13%)
Query: 87 NTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGI 146
N++I Y GD+ A +VF ++D VS +SMI+ + GS + L LF++ + E +
Sbjct: 170 NSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKK-MESEDV 228
Query: 147 KPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNA 206
K VT VLS CA + +L G+ V +I +N +N L +++MY K G + +A
Sbjct: 229 KASHVTMVGVLSACAKIRNLEF--GRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDA 286
Query: 207 AMVFELMVE-------------------------------RNVLSWTALICGAAQWGFCE 235
+F+ M E +++++W ALI Q G
Sbjct: 287 KRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPN 346
Query: 236 EALVVFEKMRV-AGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASL 294
EAL+VF ++++ ++ N++T LSACA G +E GR I+ +G+ H ++L
Sbjct: 347 EALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSAL 406
Query: 295 VYLVGKSGRLEEAYEIIKTMK 315
+++ K G LE++ E+ +++
Sbjct: 407 IHMYSKCGDLEKSREVFNSVE 427
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 140/286 (48%), Gaps = 8/286 (2%)
Query: 90 IVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPD 149
+ S ++ AR+VF+E P+ +S + +++I AY + + F ++ P+
Sbjct: 71 MAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPN 130
Query: 150 QVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMV 209
+ T ++ A + SL L G+S+HG VK+ + + +L++ Y G L +A V
Sbjct: 131 KYTFPFLIKAAAEVSSLSL--GQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKV 188
Query: 210 FELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLV 269
F + E++V+SW ++I G Q G ++AL +F+KM V+ + +T GVLSACA +
Sbjct: 189 FTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNL 248
Query: 270 EEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSA 329
E GR+ IE+ + + +++ + K G +E+A + M+ + N V + + L
Sbjct: 249 EFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDN-VTWTTMLDG 307
Query: 330 CKEHKQFEMAERVIEQVLRMVKPEDDRGIYRLIHDLYVMGEKWEEA 375
+ +E A V+ + P+ D + + Y K EA
Sbjct: 308 YAISEDYEAAREVLNSM-----PQKDIVAWNALISAYEQNGKPNEA 348
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 230 bits (587), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 135/382 (35%), Positives = 230/382 (60%), Gaps = 10/382 (2%)
Query: 1 MHLYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLG-FAPTHLHVANCL 59
+ LY K+ G+ D + V +L C HL + + + +H I + G ++L ++N L
Sbjct: 217 LKLYFKMVSDGIEPDEY-TVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNAL 275
Query: 60 LNAYVLLSFLD-ACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLS 118
L+ Y A FD M ++ +WNTM+VG+ R GD++ A+ VF++ P+RD VS +
Sbjct: 276 LDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWN 335
Query: 119 SMISAYNNIGSSKQGL-SLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGF 177
S++ Y+ G ++ + LF + + E +KPD+VT +++SG A+ G L G+ VHG
Sbjct: 336 SLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELS--HGRWVHGL 393
Query: 178 IVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEA 237
+++ + +A L + L++MY K G++ A MVF+ E++V WT++I G A G ++A
Sbjct: 394 VIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHGNGQQA 453
Query: 238 LVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIED-YGMEPKVHHYASLVY 296
L +F +M+ GV PN +T VL+AC+H+GLVEEG F ++D +G +P+ HY SLV
Sbjct: 454 LQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVD 513
Query: 297 LVGKSGRLEEAYEII-KTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPEDD 355
L+ ++GR+EEA +I+ K M + P+ ++GS LSAC+ + E AE + ++L++ +PE +
Sbjct: 514 LLCRAGRVEEAKDIVQKKMPMRPSQSMWGSILSACRGGEDIETAELALTELLKL-EPEKE 572
Query: 356 RGIYRLIHDLYVMGEKWEEAAK 377
G Y L+ ++Y +W + K
Sbjct: 573 GG-YVLLSNIYATVGRWGYSDK 593
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 91/374 (24%), Positives = 163/374 (43%), Gaps = 77/374 (20%)
Query: 3 LYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCL-LN 61
LYS + R V D ++ +K+ + L+ ++ +H HII V+ CL L
Sbjct: 120 LYSSMIRHRVSPDRQTFLYLMKASSF----LSEVKQIHCHII----------VSGCLSLG 165
Query: 62 AYVLLSFLDACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMI 121
Y+ WN+++ Y G+ A +VF P D S + MI
Sbjct: 166 NYL---------------------WNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMI 204
Query: 122 SAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKN 181
Y G S + L L+ + ++ +GI+PD+ T ++L C H+ + L GK VHG+I +
Sbjct: 205 VGYAKQGFSLEALKLYFK-MVSDGIEPDEYTVLSLLVCCGHLSDIRL--GKGVHGWIERR 261
Query: 182 G--WELNAELGATLVNMYAKG-------------------------------GVLRNAAM 208
G + N L L++MY K G + A
Sbjct: 262 GPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQA 321
Query: 209 VFELMVERNVLSWTALICGAAQWGFCEEALV---VFEKMRVAGVRPNELTFTGVLSACAH 265
VF+ M +R+++SW +L+ G ++ G C++ V +E V V+P+ +T ++S A+
Sbjct: 322 VFDQMPKRDLVSWNSLLFGYSKKG-CDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAAN 380
Query: 266 AGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGS 325
G + GR ++ ++ ++L+ + K G +E A+ + KT E +V ++ S
Sbjct: 381 NGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKT-ATEKDVALWTS 439
Query: 326 FLSACKEHKQFEMA 339
++ H + A
Sbjct: 440 MITGLAFHGNGQQA 453
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 77/176 (43%), Gaps = 9/176 (5%)
Query: 109 APQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGL 168
P + ++MISA + SSK ++ + PD+ T ++ + + +
Sbjct: 95 TPNPNVFVYNTMISA---VSSSKNECFGLYSSMIRHRVSPDRQTFLYLMKASSFLSEV-- 149
Query: 169 LAGKSVHGFIVKNG-WELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICG 227
K +H I+ +G L L +LV Y + G A VF M +V S+ +I G
Sbjct: 150 ---KQIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVG 206
Query: 228 AAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYG 283
A+ GF EAL ++ KM G+ P+E T +L C H + G+ IE G
Sbjct: 207 YAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRG 262
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 228 bits (581), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 125/395 (31%), Positives = 225/395 (56%), Gaps = 20/395 (5%)
Query: 1 MHLYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLL 60
+ L ++ R V S ++ L +C S + + + +H ++ + P+ L + N L+
Sbjct: 221 IELLVEMERNLVSPTSVTLLLVLSAC-SKVKDKDLCKRVHEYVSECKTEPS-LRLENALV 278
Query: 61 NAYVLLSFLDACI-LFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSS 119
NAY +D + +F M R+ ++W +++ GY G+++ AR F++ P RD +S +
Sbjct: 279 NAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTI 338
Query: 120 MISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIV 179
MI Y G + L +FR + G+ PD+ T +VL+ CAH+GSL + G+ + +I
Sbjct: 339 MIDGYLRAGCFNESLEIFRE-MQSAGMIPDEFTMVSVLTACAHLGSLEI--GEWIKTYID 395
Query: 180 KNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALV 239
KN + + +G L++MY K G A VF M +R+ +WTA++ G A G +EA+
Sbjct: 396 KNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIK 455
Query: 240 VFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYF-KMIEDYGMEPKVHHYASLVYLV 298
VF +M+ ++P+++T+ GVLSAC H+G+V++ R++F KM D+ +EP + HY +V ++
Sbjct: 456 VFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDML 515
Query: 299 GKSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPEDDRGI 358
G++G ++EAYEI++ M + PN +V+G+ L A + H MAE +++L + D+ +
Sbjct: 516 GRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILEL--EPDNGAV 573
Query: 359 YRLIHDLYVMGEKWEE-----------AAKLGPGF 382
Y L+ ++Y ++W++ A K PGF
Sbjct: 574 YALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGF 608
Score = 104 bits (260), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 99/387 (25%), Positives = 164/387 (42%), Gaps = 69/387 (17%)
Query: 1 MHLYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLL 60
+ LY + + GV DS F L +L + LH H++K G ++L+V N L+
Sbjct: 119 VRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHVVKFGLG-SNLYVQNALV 177
Query: 61 NAYVLLSFLD-ACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSS 119
Y L +D A +FD + +WN MI GY+R + + + E+ E +R+ VS
Sbjct: 178 KMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEM-ERNLVS--- 233
Query: 120 MISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIV 179
P VT VLS C+ + L K VH ++
Sbjct: 234 ----------------------------PTSVTLLLVLSACSKVKDKDLC--KRVHEYVS 263
Query: 180 KNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQ--------- 230
+ E + L LVN YA G + A +F M R+V+SWT+++ G +
Sbjct: 264 ECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLART 323
Query: 231 ------------W----------GFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGL 268
W G E+L +F +M+ AG+ P+E T VL+ACAH G
Sbjct: 324 YFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGS 383
Query: 269 VEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLS 328
+E G I+ ++ V +L+ + K G E+A ++ M + + + + +
Sbjct: 384 LEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMD-QRDKFTWTAMVV 442
Query: 329 ACKEHKQFEMAERVIEQVLRM-VKPED 354
+ Q + A +V Q+ M ++P+D
Sbjct: 443 GLANNGQGQEAIKVFFQMQDMSIQPDD 469
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 133/282 (47%), Gaps = 8/282 (2%)
Query: 97 GDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAV 156
G V A ++F + P+ D V ++MI ++ + +G+ L+ +L EG+ PD T +
Sbjct: 82 GHVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLN-MLKEGVTPDSHTFPFL 140
Query: 157 LSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVER 216
L+G G L GK +H +VK G N + LV MY+ G++ A VF+ +
Sbjct: 141 LNGLKRDGG-ALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKE 199
Query: 217 NVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYF 276
+V SW +I G + EE++ + +M V P +T VLSAC+ + +R
Sbjct: 200 DVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVH 259
Query: 277 KMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQF 336
+ + + EP + +LV G ++ A I ++MK +V+ + S + E
Sbjct: 260 EYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKAR-DVISWTSIVKGYVERGNL 318
Query: 337 EMAERVIEQVLRMVKPEDDRGIYRLIHDLYVMGEKWEEAAKL 378
++A +Q+ P DR + ++ D Y+ + E+ ++
Sbjct: 319 KLARTYFDQM-----PVRDRISWTIMIDGYLRAGCFNESLEI 355
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 228 bits (580), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 134/381 (35%), Positives = 224/381 (58%), Gaps = 13/381 (3%)
Query: 3 LYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLLNA 62
+Y ++ R G+ D F +KS +S L + + LH ++K G L + N L++
Sbjct: 95 VYIQMLRFGLLPDHMTYPFLMKS-SSRLSNRKLGGSLHCSVVKSGL-EWDLFICNTLIHM 152
Query: 63 YVLLSFLD---ACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSS 119
Y SF D A LFDEMP++N VTWN+++ Y++SGDV AR VF+E +RD V+ SS
Sbjct: 153 YG--SFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSS 210
Query: 120 MISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIV 179
MI Y G + L +F +++ K ++VT +V+ CAH+G+L GK+VH +I+
Sbjct: 211 MIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALN--RGKTVHRYIL 268
Query: 180 KNGWELNAELGATLVNMYAKGGVLRNAAMVF--ELMVERNVLSWTALICGAAQWGFCEEA 237
L L +L++MYAK G + +A VF + E + L W A+I G A GF E+
Sbjct: 269 DVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLASHGFIRES 328
Query: 238 LVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYL 297
L +F KMR + + P+E+TF +L+AC+H GLV+E +FK +++ G EPK HYA +V +
Sbjct: 329 LQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSLKESGAEPKSEHYACMVDV 388
Query: 298 VGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPEDDRG 357
+ ++G +++A++ I M ++P + G+ L+ C H E+AE V ++++ + +P +D G
Sbjct: 389 LSRAGLVKDAHDFISEMPIKPTGSMLGALLNGCINHGNLELAETVGKKLIEL-QPHND-G 446
Query: 358 IYRLIHDLYVMGEKWEEAAKL 378
Y + ++Y + +++ A +
Sbjct: 447 RYVGLANVYAINKQFRAARSM 467
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/337 (22%), Positives = 147/337 (43%), Gaps = 69/337 (20%)
Query: 32 SLTIIQHLHAHIIKLGFAPTHLHVANCL-LNAYVLLSFLDACILF-DEMPNRNTVTWNTM 89
S++ + +H +I LG + V+ L +A +D F ++ + WN +
Sbjct: 20 SMSELYKIHTLLITLGLSEEEPFVSQTLSFSALSSSGDVDYAYKFLSKLSDPPNYGWNFV 79
Query: 90 IVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPD 149
I G+S S + +++ +S++ ++L F G+ PD
Sbjct: 80 IRGFSNSRNPEKS-------------------------------ISVYIQMLRF-GLLPD 107
Query: 150 QVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNM------------- 196
+T ++ + + + L G S+H +VK+G E + + TL++M
Sbjct: 108 HMTYPFLMKSSSRLSNRKL--GGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKL 165
Query: 197 ------------------YAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEAL 238
YAK G + +A +VF+ M ER+V++W+++I G + G +AL
Sbjct: 166 FDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKAL 225
Query: 239 VVFEK-MRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYL 297
+F++ MR+ + NE+T V+ ACAH G + G+ + I D + V SL+ +
Sbjct: 226 EIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDM 285
Query: 298 VGKSGRLEEAYEIIKTMKV-EPNVVVFGSFLSACKEH 333
K G + +A+ + V E + +++ + + H
Sbjct: 286 YAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLASH 322
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 226 bits (577), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 130/380 (34%), Positives = 219/380 (57%), Gaps = 10/380 (2%)
Query: 1 MHLYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLL 60
+ ++ + + V D + + +C S L ++ + Q +H ++K + ++N +
Sbjct: 238 LDVFQMMLESRVEPDEVTLASVISACAS-LSAIKVGQEVHGRVVKNDKLRNDIILSNAFV 296
Query: 61 NAYVLLSFL-DACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSS 119
+ Y S + +A +FD MP RN + +MI GY+ + + AR +F + +R+ VS ++
Sbjct: 297 DMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNA 356
Query: 120 MISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSL--GLLAGKSV--H 175
+I+ Y G +++ LSLF +L E + P + +L CA + L G+ A V H
Sbjct: 357 LIAGYTQNGENEEALSLFC-LLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKH 415
Query: 176 GFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCE 235
GF ++G E + +G +L++MY K G + +VF M+ER+ +SW A+I G AQ G+
Sbjct: 416 GFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGN 475
Query: 236 EALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYF-KMIEDYGMEPKVHHYASL 294
EAL +F +M +G +P+ +T GVLSAC HAG VEEGR YF M D+G+ P HY +
Sbjct: 476 EALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCM 535
Query: 295 VYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPED 354
V L+G++G LEEA +I+ M ++P+ V++GS L+ACK H+ + + V E++L V+P +
Sbjct: 536 VDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLE-VEPSN 594
Query: 355 DRGIYRLIHDLYVMGEKWEE 374
G Y L+ ++Y KWE+
Sbjct: 595 S-GPYVLLSNMYAELGKWED 613
Score = 152 bits (385), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 97/316 (30%), Positives = 169/316 (53%), Gaps = 7/316 (2%)
Query: 15 DSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLLNAYVLL-SFLDACI 73
DS L SC S ++++HA +IK GF+ + + N L++AY S D
Sbjct: 18 DSSPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFS-NEIFIQNRLIDAYSKCGSLEDGRQ 76
Query: 74 LFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQG 133
+FD+MP RN TWN+++ G ++ G + A +F P+RD + +SM+S + ++
Sbjct: 77 VFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEA 136
Query: 134 LSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATL 193
L F ++ EG ++ + +VLS C+ + + G VH I K+ + + +G+ L
Sbjct: 137 LCYFA-MMHKEGFVLNEYSFASVLSACSGLNDMN--KGVQVHSLIAKSPFLSDVYIGSAL 193
Query: 194 VNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNE 253
V+MY+K G + +A VF+ M +RNV+SW +LI Q G EAL VF+ M + V P+E
Sbjct: 194 VDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDE 253
Query: 254 LTFTGVLSACAHAGLVEEGRR-YFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIK 312
+T V+SACA ++ G+ + +++++ + + + V + K R++EA I
Sbjct: 254 VTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFD 313
Query: 313 TMKVEPNVVVFGSFLS 328
+M + NV+ S +S
Sbjct: 314 SMPIR-NVIAETSMIS 328
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 226 bits (575), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 133/380 (35%), Positives = 205/380 (53%), Gaps = 39/380 (10%)
Query: 1 MHLYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLL 60
M + ++ +TGV + +V LK+ + + + +H ++ G + + + L+
Sbjct: 189 MVYFVEMKKTGVAANEMTVVSVLKA-AGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLV 247
Query: 61 NAYVLLS-FLDACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSS 119
+ Y S + DA +FDEMP+RN VTW +I GY +S + VFEE + D
Sbjct: 248 DMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSD------ 301
Query: 120 MISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIV 179
+ P++ T +VLS CAH+G+L G+ VH +++
Sbjct: 302 --------------------------VAPNEKTLSSVLSACAHVGALH--RGRRVHCYMI 333
Query: 180 KNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALV 239
KN E+N G TL+++Y K G L A +VFE + E+NV +WTA+I G A G+ +A
Sbjct: 334 KNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFD 393
Query: 240 VFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYF-KMIEDYGMEPKVHHYASLVYLV 298
+F M + V PNE+TF VLSACAH GLVEEGRR F M + MEPK HYA +V L
Sbjct: 394 LFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHYACMVDLF 453
Query: 299 GKSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPEDDRGI 358
G+ G LEEA +I+ M +EP VV+G+ +C HK +E+ + +V+++ +P G
Sbjct: 454 GRKGLLEEAKALIERMPMEPTNVVWGALFGSCLLHKDYELGKYAASRVIKL-QPSHS-GR 511
Query: 359 YRLIHDLYVMGEKWEEAAKL 378
Y L+ +LY + W+E A++
Sbjct: 512 YTLLANLYSESQNWDEVARV 531
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 97/327 (29%), Positives = 150/327 (45%), Gaps = 38/327 (11%)
Query: 87 NTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGI 146
N++I GYS SG A +F+ A +D V+ ++MI + GS+ + + F + G+
Sbjct: 142 NSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVE-MKKTGV 200
Query: 147 KPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGW-ELNAELGATLVNMYAKGGVLRN 205
+++T +VL + + G+SVHG ++ G + + +G++LV+MY K +
Sbjct: 201 AANEMTVVSVLKAAGKVEDVRF--GRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDD 258
Query: 206 AAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAH 265
A VF+ M RNV++WTALI G Q ++ ++VFE+M + V PNE T + VLSACAH
Sbjct: 259 AQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAH 318
Query: 266 AGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEE------------------- 306
G + GRR + +E +L+ L K G LEE
Sbjct: 319 VGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAM 378
Query: 307 ------------AYEIIKTM---KVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVK 351
A+++ TM V PN V F + LSAC E R+ +
Sbjct: 379 INGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFN 438
Query: 352 PEDDRGIYRLIHDLYVMGEKWEEAAKL 378
E Y + DL+ EEA L
Sbjct: 439 MEPKADHYACMVDLFGRKGLLEEAKAL 465
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 91/175 (52%), Gaps = 2/175 (1%)
Query: 175 HGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFC 234
H IVK G + + + +L++ Y+ G+ A+ +F+ +++V++WTA+I G + G
Sbjct: 126 HAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSA 185
Query: 235 EEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYG-MEPKVHHYAS 293
EA+V F +M+ GV NE+T VL A V GR + + G ++ V +S
Sbjct: 186 SEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSS 245
Query: 294 LVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLR 348
LV + GK ++A ++ M NVV + + ++ + + F+ V E++L+
Sbjct: 246 LVDMYGKCSCYDDAQKVFDEMPSR-NVVTWTALIAGYVQSRCFDKGMLVFEEMLK 299
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 226 bits (575), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 137/384 (35%), Positives = 223/384 (58%), Gaps = 13/384 (3%)
Query: 1 MHLYSKLHRTGV-PFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCL 59
+ ++SK+ R + D F + L +C ++L L I + +H+HI+ GF + + V N L
Sbjct: 263 LDIFSKMLRDSLLSPDRFTLASVLSAC-ANLEKLCIGKQIHSHIVTTGFDISGI-VLNAL 320
Query: 60 LNAYVLLSFLDACILFDEMPNRNTVT---WNTMIVGYSRSGDVQRAREVFEEAPQRDSVS 116
++ Y ++ E + + ++ GY + GD+ +A+ +F RD V+
Sbjct: 321 ISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVA 380
Query: 117 LSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHG 176
++MI Y GS + ++LFR ++ G +P+ T A+LS L GK +HG
Sbjct: 381 WTAMIVGYEQHGSYGEAINLFRS-MVGGGQRPNSYTLAAMLS--VASSLASLSHGKQIHG 437
Query: 177 FIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELM-VERNVLSWTALICGAAQWGFCE 235
VK+G + + L+ MYAK G + +A+ F+L+ ER+ +SWT++I AQ G E
Sbjct: 438 SAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAE 497
Query: 236 EALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYG-MEPKVHHYASL 294
EAL +FE M + G+RP+ +T+ GV SAC HAGLV +GR+YF M++D + P + HYA +
Sbjct: 498 EALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACM 557
Query: 295 VYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPED 354
V L G++G L+EA E I+ M +EP+VV +GS LSAC+ HK ++ + E++L +++PE+
Sbjct: 558 VDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLL-LLEPEN 616
Query: 355 DRGIYRLIHDLYVMGEKWEEAAKL 378
G Y + +LY KWEEAAK+
Sbjct: 617 S-GAYSALANLYSACGKWEEAAKI 639
Score = 145 bits (365), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 105/319 (32%), Positives = 161/319 (50%), Gaps = 42/319 (13%)
Query: 37 QHLHAHIIKLGFAPTHLHVANCLLNAYVLLSF-LDACILFDEMPNRNTVTWNTMIVGYSR 95
Q +H +IK G + +++ N L+N Y + L A LFDEMP R +WNT++ YS+
Sbjct: 34 QLVHCRVIKSGLMFS-VYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSK 92
Query: 96 SGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGA 155
GD+ E F++ PQRDSVS ++MI Y NIG + + + ++ EGI+P Q T
Sbjct: 93 RGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGD-MVKEGIEPTQFTLTN 151
Query: 156 VLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGG------------VL 203
VL+ A + + GK VH FIVK G N + +L+NMYAK G V+
Sbjct: 152 VLASVA--ATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVV 209
Query: 204 RN----AAMV---------------FELMVERNVLSWTALICGAAQWGFCEEALVVFEKM 244
R+ AM+ FE M ER++++W ++I G Q G+ AL +F KM
Sbjct: 210 RDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKM 269
Query: 245 -RVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGR 303
R + + P+ T VLSACA+ + G++ I G + +L+ + + G
Sbjct: 270 LRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGG 329
Query: 304 LEEAYEII-----KTMKVE 317
+E A +I K +K+E
Sbjct: 330 VETARRLIEQRGTKDLKIE 348
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 225 bits (574), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 128/378 (33%), Positives = 221/378 (58%), Gaps = 9/378 (2%)
Query: 3 LYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLLNA 62
Y+++ ++ + D+ F +K+ +S + + + + H+ I++ GF ++V N L++
Sbjct: 104 FYTQMLKSRIWPDNITFPFLIKA-SSEMECVLVGEQTHSQIVRFGFQ-NDVYVENSLVHM 161
Query: 63 YVLLSFLDAC-ILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMI 121
Y F+ A +F +M R+ V+W +M+ GY + G V+ ARE+F+E P R+ + S MI
Sbjct: 162 YANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMI 221
Query: 122 SAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKN 181
+ Y ++ + LF + EG+ ++ +V+S CAH+G+L G+ + ++VK+
Sbjct: 222 NGYAKNNCFEKAIDLFE-FMKREGVVANETVMVSVISSCAHLGALEF--GERAYEYVVKS 278
Query: 182 GWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVF 241
+N LG LV+M+ + G + A VFE + E + LSW+++I G A G +A+ F
Sbjct: 279 HMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYF 338
Query: 242 EKMRVAGVRPNELTFTGVLSACAHAGLVEEGRR-YFKMIEDYGMEPKVHHYASLVYLVGK 300
+M G P ++TFT VLSAC+H GLVE+G Y M +D+G+EP++ HY +V ++G+
Sbjct: 339 SQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGR 398
Query: 301 SGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPEDDRGIYR 360
+G+L EA I M V+PN + G+ L ACK +K E+AERV +++ VKPE G Y
Sbjct: 399 AGKLAEAENFILKMHVKPNAPILGALLGACKIYKNTEVAERVGNMLIK-VKPEHS-GYYV 456
Query: 361 LIHDLYVMGEKWEEAAKL 378
L+ ++Y +W++ L
Sbjct: 457 LLSNIYACAGQWDKIESL 474
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 225 bits (573), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 127/378 (33%), Positives = 212/378 (56%), Gaps = 13/378 (3%)
Query: 3 LYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLLNA 62
LY ++ V D++ I LK+C L + + +HA ++KLGF + V ++
Sbjct: 114 LYHRMIHNSVLPDNYVITSVLKAC-----DLKVCREIHAQVLKLGFGSSR-SVGLKMMEI 167
Query: 63 YVLL-SFLDACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMI 121
Y ++A +FDEMP+R+ V MI YS G ++ A E+F++ +D+V ++MI
Sbjct: 168 YGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEALELFQDVKIKDTVCWTAMI 227
Query: 122 SAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKN 181
+ L LFR + + E + ++ TA VLS C+ +G+L L G+ VH F+
Sbjct: 228 DGLVRNKEMNKALELFREMQM-ENVSANEFTAVCVLSACSDLGALEL--GRWVHSFVENQ 284
Query: 182 GWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVF 241
EL+ +G L+NMY++ G + A VF +M +++V+S+ +I G A G EA+ F
Sbjct: 285 RMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVISYNTMISGLAMHGASVEAINEF 344
Query: 242 EKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFK-MIEDYGMEPKVHHYASLVYLVGK 300
M G RPN++T +L+AC+H GL++ G F M + +EP++ HY +V L+G+
Sbjct: 345 RDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGR 404
Query: 301 SGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPEDDRGIYR 360
GRLEEAY I+ + +EP+ ++ G+ LSACK H E+ E++ +++ P D G Y
Sbjct: 405 VGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGNMELGEKIAKRLFESENP--DSGTYV 462
Query: 361 LIHDLYVMGEKWEEAAKL 378
L+ +LY KW+E+ ++
Sbjct: 463 LLSNLYASSGKWKESTEI 480
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 119/266 (44%), Gaps = 39/266 (14%)
Query: 99 VQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLS 158
V A +VF + ++MI + + G S G+SL+ R ++ + PD +VL
Sbjct: 77 VDYAYDVFSYVSNPNVYLYTAMIDGFVSSGRSADGVSLYHR-MIHNSVLPDNYVITSVLK 135
Query: 159 GCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNV 218
C L + +H ++K G+ + +G ++ +Y K G L NA +F+ M +R+
Sbjct: 136 AC------DLKVCREIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDH 189
Query: 219 LSWTALICGAAQWGFCEEALVVFE-------------------------------KMRVA 247
++ T +I ++ GF +EAL +F+ +M++
Sbjct: 190 VAATVMINCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQME 249
Query: 248 GVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEA 307
V NE T VLSAC+ G +E GR +E+ ME +L+ + + G + EA
Sbjct: 250 NVSANEFTAVCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEA 309
Query: 308 YEIIKTMKVEPNVVVFGSFLSACKEH 333
+ + M+ + +V+ + + +S H
Sbjct: 310 RRVFRVMR-DKDVISYNTMISGLAMH 334
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 225 bits (573), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 124/392 (31%), Positives = 216/392 (55%), Gaps = 13/392 (3%)
Query: 2 HLYSKLHRTGVPFDSFCIVFTLKSCTSHLH-SLTIIQHLHAHIIKLGFAPTHLHVANCLL 60
+ ++ R VP D F K+C + + LT+++ LH ++ G + L N L+
Sbjct: 101 RFFVEMRRRSVPPDFHTFPFVFKACAAKKNGDLTLVKTLHCQALRFGLL-SDLFTLNTLI 159
Query: 61 NAYVLLSFLDACI-LFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSS 119
Y L++ +D+ + LFDE P R+ VT+N +I G ++ ++ RARE+F+ P RD VS +S
Sbjct: 160 RVYSLIAPIDSALQLFDENPQRDVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNS 219
Query: 120 MISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIV 179
+IS Y + ++ + LF ++ G+KPD V + LS CA G GK++H +
Sbjct: 220 LISGYAQMNHCREAIKLFDEMVAL-GLKPDNVAIVSTLSACAQSGDWQ--KGKAIHDYTK 276
Query: 180 KNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALV 239
+ +++ L LV+ YAK G + A +FEL ++ + +W A+I G A G E +
Sbjct: 277 RKRLFIDSFLATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGNGELTVD 336
Query: 240 VFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIED-YGMEPKVHHYASLVYLV 298
F KM +G++P+ +TF VL C+H+GLV+E R F + Y + ++ HY + L+
Sbjct: 337 YFRKMVSSGIKPDGVTFISVLVGCSHSGLVDEARNLFDQMRSLYDVNREMKHYGCMADLL 396
Query: 299 GKSGRLEEAYEIIKTMKVE----PNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPED 354
G++G +EEA E+I+ M + ++ + L C+ H E+AE+ +V + + PED
Sbjct: 397 GRAGLIEEAAEMIEQMPKDGGNREKLLAWSGLLGGCRIHGNIEIAEKAANRV-KALSPED 455
Query: 355 DRGIYRLIHDLYVMGEKWEEAAKLGPGFDFNR 386
G+Y+++ ++Y E+WEE K+ D ++
Sbjct: 456 G-GVYKVMVEMYANAERWEEVVKVREIIDRDK 486
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 224 bits (571), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 123/320 (38%), Positives = 191/320 (59%), Gaps = 6/320 (1%)
Query: 57 NCLLNAYVLLSFLD-ACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSV 115
N LL+AY+ +D A LFDEM RN +WN MI GY+ +G V+ A+EVF+ P RD V
Sbjct: 210 NSLLSAYLEKGLVDEARALFDEMEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVV 269
Query: 116 SLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVH 175
S ++M++AY ++G + L +F ++L KPD T +VLS CA +GSL G+ VH
Sbjct: 270 SWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLS--QGEWVH 327
Query: 176 GFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCE 235
+I K+G E+ L LV+MY+K G + A VF +R+V +W ++I + G +
Sbjct: 328 VYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGK 387
Query: 236 EALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIED-YGMEPKVHHYASL 294
+AL +F +M G +PN +TF GVLSAC H G++++ R+ F+M+ Y +EP + HY +
Sbjct: 388 DALEIFSEMVYEGFKPNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCM 447
Query: 295 VYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPED 354
V L+G+ G++EEA E++ + + ++ S L ACK Q E AER+ ++L + D
Sbjct: 448 VDLLGRMGKIEEAEELVNEIPADEASILLESLLGACKRFGQLEQAERIANRLLEL-NLRD 506
Query: 355 DRGIYRLIHDLYVMGEKWEE 374
G Y + +LY +WE+
Sbjct: 507 SSG-YAQMSNLYASDGRWEK 525
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 109/467 (23%), Positives = 170/467 (36%), Gaps = 139/467 (29%)
Query: 10 TGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLG-FAPTHLHVANCLLNAYVLLSF 68
T VP SF T SLT IQ HA ++K G F T +A L++F
Sbjct: 38 TPVPILSF---------TERAKSLTEIQQAHAFMLKTGLFHDT--------FSASKLVAF 80
Query: 69 LDACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIG 128
P TV++ A + + + +S+I AY N
Sbjct: 81 AAT------NPEPKTVSY---------------AHSILNRIGSPNGFTHNSVIRAYANSS 119
Query: 129 SSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAE 188
+ + L++FR +LL + PD+ + VL CA G G+ +HG +K+G +
Sbjct: 120 TPEVALTVFREMLL-GPVFPDKYSFTFVLKACAAF--CGFEEGRQIHGLFIKSGLVTDVF 176
Query: 189 LGATLVNMYAKG-------------------------------GVLRNAAMVFELMVERN 217
+ TLVN+Y + G++ A +F+ M ERN
Sbjct: 177 VENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARALFDEMEERN 236
Query: 218 VLSWTALICGAAQWGFCEEALVVFEKMRVAGV---------------------------- 249
V SW +I G A G +EA VF+ M V V
Sbjct: 237 VESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLD 296
Query: 250 ----RPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLE 305
+P+ T VLSACA G + +G I+ +G+E + +LV + K G+++
Sbjct: 297 DSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKID 356
Query: 306 EAYEIIKTMK----------------------------------VEPNVVVFGSFLSACK 331
+A E+ + +PN + F LSAC
Sbjct: 357 KALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACN 416
Query: 332 EHKQFEMAERVIEQVLRMVKPEDDRGIYRLIHDLYVMGEKWEEAAKL 378
+ A ++ E + + + E Y + DL K EEA +L
Sbjct: 417 HVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEEL 463
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 223 bits (569), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 138/421 (32%), Positives = 225/421 (53%), Gaps = 44/421 (10%)
Query: 3 LYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTH-------LHV 55
LY+++ + GV D + F LK+C S L + H +++ GF L
Sbjct: 99 LYTEMEKRGVSPDRYTFTFVLKAC-SKLEWRSNGFAFHGKVVRHGFVLNEYVKNALILFH 157
Query: 56 ANC-----------------------LLNAYVLLSFLDACI-LFDEMPNRNTVTWNTMIV 91
ANC + + Y +D + LFDEMP ++ V WN MI
Sbjct: 158 ANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEMPYKDQVAWNVMIT 217
Query: 92 GYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQV 151
G + ++ ARE+F+ ++D V+ ++MIS Y N G K+ L +F+ + G PD V
Sbjct: 218 GCLKCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKE-MRDAGEHPDVV 276
Query: 152 TAGAVLSGCAHMGSLGLLAGKSVHGFI-----VKNGWELNAELGATLVNMYAKGGVLRNA 206
T ++LS CA +G L GK +H +I V + + + L++MYAK G + A
Sbjct: 277 TILSLLSACAVLGDLE--TGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRA 334
Query: 207 AMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHA 266
VF + +R++ +W LI G A E ++ +FE+M+ V PNE+TF GV+ AC+H+
Sbjct: 335 IEVFRGVKDRDLSTWNTLIVGLAL-HHAEGSIEMFEEMQRLKVWPNEVTFIGVILACSHS 393
Query: 267 GLVEEGRRYFKMIED-YGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGS 325
G V+EGR+YF ++ D Y +EP + HY +V ++G++G+LEEA+ +++MK+EPN +V+ +
Sbjct: 394 GRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESMKIEPNAIVWRT 453
Query: 326 FLSACKEHKQFEMAERVIEQVLRMVKPEDDRGIYRLIHDLYVMGEKWEEAAKLGPGFDFN 385
L ACK + E+ + E++L M K D+ G Y L+ ++Y +W+ K+ FD
Sbjct: 454 LLGACKIYGNVELGKYANEKLLSMRK--DESGDYVLLSNIYASTGQWDGVQKVRKMFDDT 511
Query: 386 R 386
R
Sbjct: 512 R 512
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/284 (21%), Positives = 124/284 (43%), Gaps = 51/284 (17%)
Query: 74 LFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQR----DSVSLSSMISAYNNIGS 129
LFDE+P + N ++ G ++S ++ ++ E +R D + + ++ A + +
Sbjct: 68 LFDEIPKPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEW 127
Query: 130 SKQGLSLFRRVLLFEGIKPDQVTAGAVL--SGCAHMGSLGLLAGKSVHGFIVKNGWELNA 187
G + +V+ + + V +L + C +G L S V W
Sbjct: 128 RSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKV--AW---- 181
Query: 188 ELGATLVNMYAKGGVLRNAAMVFELM-------------------------------VER 216
+++ + YAK G + A +F+ M E+
Sbjct: 182 ---SSMTSGYAKRGKIDEAMRLFDEMPYKDQVAWNVMITGCLKCKEMDSARELFDRFTEK 238
Query: 217 NVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRR-Y 275
+V++W A+I G G+ +EAL +F++MR AG P+ +T +LSACA G +E G+R +
Sbjct: 239 DVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLH 298
Query: 276 FKMIEDYGMEPKVH----HYASLVYLVGKSGRLEEAYEIIKTMK 315
++E + ++ + +L+ + K G ++ A E+ + +K
Sbjct: 299 IYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVK 342
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 221 bits (563), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 137/411 (33%), Positives = 217/411 (52%), Gaps = 42/411 (10%)
Query: 3 LYSKLHRTGVPF-DSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLLN 61
++ ++ R G F DSF F +K+ + SL +H +K G +HL V L+
Sbjct: 92 VFVEMMRKGFVFPDSFSFAFVIKA-VENFRSLRTGFQMHCQALKHGL-ESHLFVGTTLIG 149
Query: 62 AY----------------------VLLSFLDACI----------LFDEMPNRNTVTWNTM 89
Y + + AC +FD+M RN +WN M
Sbjct: 150 MYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGNDVAGAREIFDKMLVRNHTSWNVM 209
Query: 90 IVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPD 149
+ GY ++G+++ A+ +F E P RD VS S+MI + GS + FR L G+ P+
Sbjct: 210 LAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRE-LQRAGMSPN 268
Query: 150 QVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMV 209
+V+ VLS C+ GS GK +HGF+ K G+ + L++MY++ G + A +V
Sbjct: 269 EVSLTGVLSACSQSGSFEF--GKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLV 326
Query: 210 FELMVE-RNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGL 268
FE M E R ++SWT++I G A G EEA+ +F +M GV P+ ++F +L AC+HAGL
Sbjct: 327 FEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGL 386
Query: 269 VEEGRRYF-KMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFL 327
+EEG YF +M Y +EP++ HY +V L G+SG+L++AY+ I M + P +V+ + L
Sbjct: 387 IEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLL 446
Query: 328 SACKEHKQFEMAERVIEQVLRMVKPEDDRGIYRLIHDLYVMGEKWEEAAKL 378
AC H E+AE+V +Q L + P ++ G L+ + Y KW++ A +
Sbjct: 447 GACSSHGNIELAEQV-KQRLNELDP-NNSGDLVLLSNAYATAGKWKDVASI 495
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 93/385 (24%), Positives = 158/385 (41%), Gaps = 46/385 (11%)
Query: 19 IVFTLKSCTSHLHS---LTIIQHLHAHIIKLGFAPTHLHVANCLLNAYVLLS--FLDACI 73
+ + C S L+S L + +H IK G +L+ + +S A
Sbjct: 1 MTIAIHHCLSLLNSCKNLRALTQIHGLFIKYGVDTDSYFTGKLILHCAISISDALPYARR 60
Query: 74 LFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQR-----DSVSLSSMISAYNNIG 128
L P + +NT++ GYS S + + VF E ++ DS S + +I A N
Sbjct: 61 LLLCFPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFR 120
Query: 129 SSKQGLSL------------------------------FRRVLLFEGIKPDQVTAGAVLS 158
S + G + F R + E +P+ V AV++
Sbjct: 121 SLRTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVIT 180
Query: 159 GCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNV 218
C G+ A + +V+N N L Y K G L +A +F M R+
Sbjct: 181 ACFR-GNDVAGAREIFDKMLVRNHTSWNVMLAG-----YIKAGELESAKRIFSEMPHRDD 234
Query: 219 LSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKM 278
+SW+ +I G A G E+ + F +++ AG+ PNE++ TGVLSAC+ +G E G+
Sbjct: 235 VSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGF 294
Query: 279 IEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEM 338
+E G V +L+ + + G + A + + M+ + +V + S ++ H Q E
Sbjct: 295 VEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEE 354
Query: 339 AERVIEQVLRMVKPEDDRGIYRLIH 363
A R+ ++ D L+H
Sbjct: 355 AVRLFNEMTAYGVTPDGISFISLLH 379
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 220 bits (561), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 136/392 (34%), Positives = 219/392 (55%), Gaps = 23/392 (5%)
Query: 3 LYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLLNA 62
Y + V + F LK+C + + + +H +K GF ++N L+
Sbjct: 115 FYEMMSDEFVEPNRFTFPSVLKAC-AKTGKIQEGKQIHGLALKYGFGGDEFVMSN-LVRM 172
Query: 63 YVLLSFL-DACILFDE---------MPNRNT-----VTWNTMIVGYSRSGDVQRAREVFE 107
YV+ F+ DA +LF + M +R V WN MI GY R GD + AR +F+
Sbjct: 173 YVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFD 232
Query: 108 EAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLG 167
+ QR VS ++MIS Y+ G K + +FR + + I+P+ VT +VL + +GSL
Sbjct: 233 KMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGD-IRPNYVTLVSVLPAISRLGSLE 291
Query: 168 LLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICG 227
L G+ +H + +G ++ LG+ L++MY+K G++ A VFE + NV++W+A+I G
Sbjct: 292 L--GEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMING 349
Query: 228 AAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYF-KMIEDYGMEP 286
A G +A+ F KMR AGVRP+++ + +L+AC+H GLVEEGRRYF +M+ G+EP
Sbjct: 350 FAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEP 409
Query: 287 KVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQV 346
++ HY +V L+G+SG L+EA E I M ++P+ V++ + L AC+ EM +RV +
Sbjct: 410 RIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANIL 469
Query: 347 LRMVKPEDDRGIYRLIHDLYVMGEKWEEAAKL 378
+ MV D G Y + ++Y W E +++
Sbjct: 470 MDMVP--HDSGAYVALSNMYASQGNWSEVSEM 499
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 143/330 (43%), Gaps = 84/330 (25%)
Query: 74 LFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQG 133
+F++MP RN +WNT+I G+S S + + ++I+
Sbjct: 81 IFNQMPQRNCFSWNTIIRGFSESDEDK------------------ALIA----------- 111
Query: 134 LSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATL 193
++LF ++ E ++P++ T +VL CA G + GK +HG +K G+ + + + L
Sbjct: 112 ITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQ--EGKQIHGLALKYGFGGDEFVMSNL 169
Query: 194 VNMYAKGGVLRN---------------------------------------------AAM 208
V MY G +++ A M
Sbjct: 170 VRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARM 229
Query: 209 VFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGL 268
+F+ M +R+V+SW +I G + GF ++A+ VF +M+ +RPN +T VL A + G
Sbjct: 230 LFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGS 289
Query: 269 VEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLS 328
+E G ED G+ ++L+ + K G +E+A + + + E NV+ + + ++
Sbjct: 290 LELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRE-NVITWSAMIN 348
Query: 329 ACKEHKQFEMAERVIEQVLRM----VKPED 354
H Q A I+ +M V+P D
Sbjct: 349 GFAIHGQ---AGDAIDCFCKMRQAGVRPSD 375
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 72/158 (45%), Gaps = 9/158 (5%)
Query: 173 SVHGFIVKNGWELNAELGATLVNMYAKGGV----LRNAAMVFELMVERNVLSWTALICGA 228
+H +K+G + A ++ A + L A +F M +RN SW +I G
Sbjct: 41 QIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCFSWNTIIRGF 100
Query: 229 AQWGFCEEALVV----FEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGM 284
++ ++AL+ +E M V PN TF VL ACA G ++EG++ + YG
Sbjct: 101 SESDE-DKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLALKYGF 159
Query: 285 EPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVV 322
++LV + G +++A + +E ++VV
Sbjct: 160 GGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVV 197
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 220 bits (560), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 112/301 (37%), Positives = 188/301 (62%), Gaps = 6/301 (1%)
Query: 55 VANCLLNAYVLLSFLD-ACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRD 113
+ N L+N Y + A LF MP RN+ +W+T+I GY SG++ RA+++FE P+++
Sbjct: 198 IWNVLINGYCRAKDMHMATTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQLFELMPEKN 257
Query: 114 SVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKS 173
VS +++I+ ++ G + +S + +L +G+KP++ T AVLS C+ G+LG +G
Sbjct: 258 VVSWTTLINGFSQTGDYETAISTYFE-MLEKGLKPNEYTIAAVLSACSKSGALG--SGIR 314
Query: 174 VHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGF 233
+HG+I+ NG +L+ +G LV+MYAK G L AA VF M +++LSWTA+I G A G
Sbjct: 315 IHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGR 374
Query: 234 CEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIE-DYGMEPKVHHYA 292
+A+ F +M +G +P+E+ F VL+AC ++ V+ G +F + DY +EP + HY
Sbjct: 375 FHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYV 434
Query: 293 SLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKP 352
+V L+G++G+L EA+E+++ M + P++ + + ACK HK + AE V + +L + P
Sbjct: 435 LVVDLLGRAGKLNEAHELVENMPINPDLTTWAALYRACKAHKGYRRAESVSQNLLEL-DP 493
Query: 353 E 353
E
Sbjct: 494 E 494
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 93/387 (24%), Positives = 152/387 (39%), Gaps = 104/387 (26%)
Query: 36 IQHLHAHIIKLGFAPTHLHVANCLLNAYVLLSFLDACI-LFDEMPNRNTVTWNTMIVGYS 94
++H+HA I++ G + VA L++ LL D + +F RN N +I G +
Sbjct: 45 LRHVHAQILRRGVLSSR--VAAQLVSCSSLLKSPDYSLSIFRNSEERNPFVLNALIRGLT 102
Query: 95 RSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAG 154
+ AR FE SS + L R+ G+KPD++T
Sbjct: 103 -----ENAR--FE---------------------SSVRHFILMLRL----GVKPDRLTFP 130
Query: 155 AVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFE--- 211
VL + +G L G+++H +KN + ++ + +LV+MYAK G L++A VFE
Sbjct: 131 FVLKSNSKLGFRWL--GRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESP 188
Query: 212 --------------------------------LMVERNVLSW------------------ 221
M ERN SW
Sbjct: 189 DRIKKESILIWNVLINGYCRAKDMHMATTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQ 248
Query: 222 -------------TALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGL 268
T LI G +Q G E A+ + +M G++PNE T VLSAC+ +G
Sbjct: 249 LFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGA 308
Query: 269 VEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLS 328
+ G R I D G++ +LV + K G L+ A + M +++ + + +
Sbjct: 309 LGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMN-HKDILSWTAMIQ 367
Query: 329 ACKEHKQFEMAERVIEQVLRMVKPEDD 355
H +F A + Q++ + D+
Sbjct: 368 GWAVHGRFHQAIQCFRQMMYSGEKPDE 394
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 219 bits (559), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 124/364 (34%), Positives = 208/364 (57%), Gaps = 9/364 (2%)
Query: 15 DSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLLNAYVLLSFLDAC-I 73
D++ + F +++CT T +Q +H I+ GF HV L++ Y L LD+C
Sbjct: 107 DNYTVNFLVQACTGLRMRETGLQ-VHGMTIRRGF-DNDPHVQTGLISLYAELGCLDSCHK 164
Query: 74 LFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQG 133
+F+ +P + V M+ +R GDV AR++FE P+RD ++ ++MIS Y +G S++
Sbjct: 165 VFNSIPCPDFVCRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREA 224
Query: 134 LSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATL 193
L++F ++ EG+K + V +VLS C +G+L G+ H +I +N ++ L TL
Sbjct: 225 LNVFH-LMQLEGVKVNGVAMISVLSACTQLGALD--QGRWAHSYIERNKIKITVRLATTL 281
Query: 194 VNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNE 253
V++YAK G + A VF M E+NV +W++ + G A GF E+ L +F M+ GV PN
Sbjct: 282 VDLYAKCGDMEKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNA 341
Query: 254 LTFTGVLSACAHAGLVEEGRRYFK-MIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIK 312
+TF VL C+ G V+EG+R+F M ++G+EP++ HY LV L ++GRLE+A II+
Sbjct: 342 VTFVSVLRGCSVVGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQ 401
Query: 313 TMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPEDDRGIYRLIHDLYVMGEKW 372
M ++P+ V+ S L A + +K E+ +++L + + G Y L+ ++Y W
Sbjct: 402 QMPMKPHAAVWSSLLHASRMYKNLELGVLASKKMLELETA--NHGAYVLLSNIYADSNDW 459
Query: 373 EEAA 376
+ +
Sbjct: 460 DNVS 463
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 121/262 (46%), Gaps = 39/262 (14%)
Query: 102 AREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLF-EGIKPDQVTAGAVLSGC 160
A ++ + + + +L+SMI A+ ++ +RR+L +KPD T ++ C
Sbjct: 59 ANQILDRSEKPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQAC 118
Query: 161 A--HMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRN------------- 205
M GL VHG ++ G++ + + L+++YA+ G L +
Sbjct: 119 TGLRMRETGL----QVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDF 174
Query: 206 ---AAMV---------------FELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVA 247
AMV FE M ER+ ++W A+I G AQ G EAL VF M++
Sbjct: 175 VCRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLE 234
Query: 248 GVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEA 307
GV+ N + VLSAC G +++GR IE ++ V +LV L K G +E+A
Sbjct: 235 GVKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKA 294
Query: 308 YEIIKTMKVEPNVVVFGSFLSA 329
E+ M+ E NV + S L+
Sbjct: 295 MEVFWGME-EKNVYTWSSALNG 315
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 219 bits (558), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 126/364 (34%), Positives = 213/364 (58%), Gaps = 16/364 (4%)
Query: 25 SCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLLNAYVLLSFL-DACILFDEMPNRNT 83
S + L +L+I + +H ++IK GF +L N L++ Y + DA LF ++ N+
Sbjct: 302 SVCAELEALSIAEKVHGYVIKGGF-EEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGI 360
Query: 84 VTWNTMIVGYSRSGDVQRAREVFEEAPQRDSV--------SLSSMISAYNNIGSSKQGLS 135
+WN++I + +G + A +F E + + V + +S+I N G L
Sbjct: 361 ESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLE 420
Query: 136 LFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVN 195
FR+ + F + + VT +LS CA + +L L G+ +HG +++ N + LVN
Sbjct: 421 YFRQ-MQFSKVLANSVTICCILSICAELPALNL--GREIHGHVIRTSMSENILVQNALVN 477
Query: 196 MYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELT 255
MYAK G+L ++VFE + +++++SW ++I G GF E+AL +F++M +G P+ +
Sbjct: 478 MYAKCGLLSEGSLVFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIA 537
Query: 256 FTGVLSACAHAGLVEEGRR-YFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTM 314
VLSAC+HAGLVE+GR ++ M + +G+EP+ HYA +V L+G+ G L+EA EI+K M
Sbjct: 538 LVAVLSACSHAGLVEKGREIFYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVKNM 597
Query: 315 KVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPEDDRGIYRLIHDLYVMGEKWEE 374
+EP V V G+ L++C+ HK ++AE + Q L +++PE G Y L+ ++Y G +WEE
Sbjct: 598 PMEPKVCVLGALLNSCRMHKNVDIAEGIASQ-LSVLEPERT-GSYMLLSNIYSAGGRWEE 655
Query: 375 AAKL 378
+A +
Sbjct: 656 SANV 659
Score = 118 bits (295), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 145/289 (50%), Gaps = 14/289 (4%)
Query: 1 MHLYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLL 60
+ LY + + G+ D + + L++C +L + + H +I++G +LHV N LL
Sbjct: 143 LELYRGMRQRGLTGDGYILPLILRACR-YLGRFGLCRAFHTQVIQIGL-KENLHVVNELL 200
Query: 61 NAYVLLSFL-DACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFE----EAPQRDSV 115
Y + DA LF EMP RN ++WN MI G+S+ D + A ++FE E + D V
Sbjct: 201 TLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEV 260
Query: 116 SLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVH 175
+ +S++S ++ G + L F ++ G S CA + +L + + VH
Sbjct: 261 TWTSVLSCHSQCGKFEDVLKYF-HLMRMSGNAVSGEALAVFFSVCAELEALSI--AEKVH 317
Query: 176 GFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCE 235
G+++K G+E L+++Y K G +++A +F + + + SW +LI G +
Sbjct: 318 GYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLD 377
Query: 236 EALVVFEKMR----VAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIE 280
EAL +F ++ V V+ N +T+T V+ C G ++ YF+ ++
Sbjct: 378 EALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQ 426
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 137/305 (44%), Gaps = 50/305 (16%)
Query: 71 ACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSS 130
A +L + R+ +I Y+R G + AR VFE S+ L S + +N+I +
Sbjct: 77 AQVLLSDFIFRSGSLAANLISVYARLGLLLDARNVFETV----SLVLLSDLRLWNSILKA 132
Query: 131 KQGLSLFRRVL-LFEGIKPDQVTAGA-----VLSGCAHMGSLGLLAGKSVHGFIVKNGWE 184
L+ L L+ G++ +T +L C ++G GL ++ H +++ G +
Sbjct: 133 NVSHGLYENALELYRGMRQRGLTGDGYILPLILRACRYLGRFGLC--RAFHTQVIQIGLK 190
Query: 185 LNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKM 244
N + L+ +Y K G + +A +F M RN +SW +I G +Q CE A+ +FE M
Sbjct: 191 ENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWM 250
Query: 245 RVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKM----------------------IEDY 282
+ +P+E+T+T VLS + G E+ +YF + +E
Sbjct: 251 QREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEAL 310
Query: 283 GMEPKVHHYA-------------SLVYLVGKSGRLEEA---YEIIKTMKVEPNVVVFGSF 326
+ KVH Y +L+++ GK G++++A + I+ +E + SF
Sbjct: 311 SIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSF 370
Query: 327 LSACK 331
+ A K
Sbjct: 371 VDAGK 375
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 86/182 (47%), Gaps = 10/182 (5%)
Query: 177 FIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFE---LMVERNVLSWTALICGAAQWGF 233
FI ++G L A L+++YA+ G+L +A VFE L++ ++ W +++ G
Sbjct: 84 FIFRSG-----SLAANLISVYARLGLLLDARNVFETVSLVLLSDLRLWNSILKANVSHGL 138
Query: 234 CEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYAS 293
E AL ++ MR G+ + +L AC + G R + + G++ +H
Sbjct: 139 YENALELYRGMRQRGLTGDGYILPLILRACRYLGRFGLCRAFHTQVIQIGLKENLHVVNE 198
Query: 294 LVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLR-MVKP 352
L+ L K+GR+ +AY + M V N + + + + E A ++ E + R KP
Sbjct: 199 LLTLYPKAGRMGDAYNLFVEMPVR-NRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFKP 257
Query: 353 ED 354
++
Sbjct: 258 DE 259
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 218 bits (556), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 108/301 (35%), Positives = 183/301 (60%), Gaps = 5/301 (1%)
Query: 74 LFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQG 133
LFDEM ++ +TW TMI GY D+ AR++F+ P+R+ VS ++MI Y ++G
Sbjct: 198 LFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEG 257
Query: 134 LSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATL 193
+ LF+ + + PD VT +VL + G+L L G+ H F+ + + ++ +
Sbjct: 258 IRLFQEMQATTSLDPDDVTILSVLPAISDTGALSL--GEWCHCFVQRKKLDKKVKVCTAI 315
Query: 194 VNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNE 253
++MY+K G + A +F+ M E+ V SW A+I G A G AL +F M + +P+E
Sbjct: 316 LDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLFVTMMIEE-KPDE 374
Query: 254 LTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKT 313
+T V++AC H GLVEEGR++F ++ + G+ K+ HY +V L+G++G L+EA ++I
Sbjct: 375 ITMLAVITACNHGGLVEEGRKWFHVMREMGLNAKIEHYGCMVDLLGRAGSLKEAEDLITN 434
Query: 314 MKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPEDDRGIYRLIHDLYVMGEKWE 373
M EPN ++ SFLSAC ++K E AER++++ + + +P++D G Y L+ +LY ++W+
Sbjct: 435 MPFEPNGIILSSFLSACGQYKDIERAERILKKAVEL-EPQND-GNYVLLRNLYAADKRWD 492
Query: 374 E 374
+
Sbjct: 493 D 493
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 118/257 (45%), Gaps = 15/257 (5%)
Query: 102 AREVFEEAPQRDSVSLS-SMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGC 160
AR++F++ PQRD LS SMI AY +L+R + PD T + C
Sbjct: 29 ARKLFDQRPQRDDSFLSNSMIKAYLETRQYPDSFALYRDLRKETCFAPDNFTFTTLTKSC 88
Query: 161 AHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLS 220
+ S+ + G +H I + G+ + + +V+MYAK G + A F+ M R+ +S
Sbjct: 89 SL--SMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSEVS 146
Query: 221 WTALICGAAQWGFCEEALVVFEKM-RVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMI 279
WTALI G + G + A +F++M V V + + ++ +G + RR F
Sbjct: 147 WTALISGYIRCGELDLASKLFDQMPHVKDV----VIYNAMMDGFVKSGDMTSARRLF--- 199
Query: 280 EDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMA 339
D V + ++++ ++ A ++ M E N+V + + + ++KQ +
Sbjct: 200 -DEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMP-ERNLVSWNTMIGGYCQNKQPQEG 257
Query: 340 ERVIE--QVLRMVKPED 354
R+ + Q + P+D
Sbjct: 258 IRLFQEMQATTSLDPDD 274
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 216 bits (551), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 117/377 (31%), Positives = 210/377 (55%), Gaps = 39/377 (10%)
Query: 3 LYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLLNA 62
++++ R G + F + +K+ + Q LH +K GF +++HV + LL+
Sbjct: 148 FFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQ-LHGFCVKCGF-DSNVHVGSALLDL 205
Query: 63 YVLLSFLD-ACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMI 121
Y +D A ++FD + +RN V+WN +I G++R ++A E+F
Sbjct: 206 YTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELF--------------- 250
Query: 122 SAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKN 181
QG +L +G +P + ++ C+ G L GK VH +++K+
Sbjct: 251 ----------QG-------MLRDGFRPSHFSYASLFGACSSTGFLE--QGKWVHAYMIKS 291
Query: 182 GWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVF 241
G +L A G TL++MYAK G + +A +F+ + +R+V+SW +L+ AQ GF +EA+ F
Sbjct: 292 GEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWF 351
Query: 242 EKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKS 301
E+MR G+RPNE++F VL+AC+H+GL++EG Y+++++ G+ P+ HY ++V L+G++
Sbjct: 352 EEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRA 411
Query: 302 GRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPEDDRGIYRL 361
G L A I+ M +EP ++ + L+AC+ HK E+ E V + DD G + +
Sbjct: 412 GDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFEL--DPDDPGPHVI 469
Query: 362 IHDLYVMGEKWEEAAKL 378
++++Y G +W +AA++
Sbjct: 470 LYNIYASGGRWNDAARV 486
Score = 135 bits (340), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 150/274 (54%), Gaps = 5/274 (1%)
Query: 82 NTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVL 141
+ V NT++ Y++ G ++ AR+VFE+ PQRD V+ +++IS Y+ L F ++L
Sbjct: 94 DIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQML 153
Query: 142 LFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGG 201
F G P++ T +V+ A G +HGF VK G++ N +G+ L+++Y + G
Sbjct: 154 RF-GYSPNEFTLSSVIKAAA--AERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYG 210
Query: 202 VLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLS 261
++ +A +VF+ + RN +SW ALI G A+ E+AL +F+ M G RP+ ++ +
Sbjct: 211 LMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFG 270
Query: 262 ACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVV 321
AC+ G +E+G+ + G + +L+ + KSG + +A +I + + +VV
Sbjct: 271 ACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRL-AKRDVV 329
Query: 322 VFGSFLSACKEHKQFEMAERVIEQVLRM-VKPED 354
+ S L+A +H + A E++ R+ ++P +
Sbjct: 330 SWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNE 363
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 91/181 (50%), Gaps = 1/181 (0%)
Query: 168 LLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICG 227
L+ G+ VH I+++ + + +G TL+NMYAK G L A VFE M +R+ ++WT LI G
Sbjct: 76 LIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISG 135
Query: 228 AAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPK 287
+Q +AL+ F +M G PNE T + V+ A A G + G +
Sbjct: 136 YSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSN 195
Query: 288 VHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVL 347
VH ++L+ L + G +++A + ++ N V + + ++ E A + + +L
Sbjct: 196 VHVGSALLDLYTRYGLMDDAQLVFDALESR-NDVSWNALIAGHARRSGTEKALELFQGML 254
Query: 348 R 348
R
Sbjct: 255 R 255
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 216 bits (550), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 122/378 (32%), Positives = 221/378 (58%), Gaps = 8/378 (2%)
Query: 3 LYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLLNA 62
+++ + +GV D ++ + SC S L ++ + H ++++ GF ++ N L++
Sbjct: 324 VFNLMMDSGVRPDRISMLSAISSC-SQLRNILWGKSCHGYVLRNGFESWD-NICNALIDM 381
Query: 63 YVLLSFLDACI-LFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMI 121
Y+ D +FD M N+ VTWN+++ GY +G+V A E FE P+++ VS +++I
Sbjct: 382 YMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTII 441
Query: 122 SAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKN 181
S ++ + +F + EG+ D VT ++ S C H+G+L L K ++ +I KN
Sbjct: 442 SGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDL--AKWIYYYIEKN 499
Query: 182 GWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVF 241
G +L+ LG TLV+M+++ G +A +F + R+V +WTA I A G E A+ +F
Sbjct: 500 GIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELF 559
Query: 242 EKMRVAGVRPNELTFTGVLSACAHAGLVEEGRR-YFKMIEDYGMEPKVHHYASLVYLVGK 300
+ M G++P+ + F G L+AC+H GLV++G+ ++ M++ +G+ P+ HY +V L+G+
Sbjct: 560 DDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGR 619
Query: 301 SGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPEDDRGIYR 360
+G LEEA ++I+ M +EPN V++ S L+AC+ EMA E++ +++ PE G Y
Sbjct: 620 AGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKI-QVLAPE-RTGSYV 677
Query: 361 LIHDLYVMGEKWEEAAKL 378
L+ ++Y +W + AK+
Sbjct: 678 LLSNVYASAGRWNDMAKV 695
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 93/376 (24%), Positives = 166/376 (44%), Gaps = 40/376 (10%)
Query: 3 LYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLLNA 62
L+ ++ +G+ D + F L +C IQ +H I+K+G+A
Sbjct: 121 LFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQ-IHGLIVKMGYA------------- 166
Query: 63 YVLLSFLDACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMIS 122
++ N+++ Y+ G++ AR+VF+E +R+ VS +SMI
Sbjct: 167 ------------------KDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMIC 208
Query: 123 AYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNG 182
Y +K + LF R++ E + P+ VT V+S CA + L G+ V+ FI +G
Sbjct: 209 GYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLE--TGEKVYAFIRNSG 266
Query: 183 WELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFE 242
E+N + + LV+MY K + A +F+ N+ A+ + G EAL VF
Sbjct: 267 IEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFN 326
Query: 243 KMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSG 302
M +GVRP+ ++ +S+C+ + G+ + G E + +L+ + K
Sbjct: 327 LMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCH 386
Query: 303 RLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPEDDRGIYRLI 362
R + A+ I M VV + S ++ E+ + + A E + PE + + I
Sbjct: 387 RQDTAFRIFDRMS-NKTVVTWNSIVAGYVENGEVDAAWETFETM-----PEKNIVSWNTI 440
Query: 363 HDLYVMGEKWEEAAKL 378
V G +EEA ++
Sbjct: 441 ISGLVQGSLFEEAIEV 456
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 73/208 (35%), Positives = 116/208 (55%), Gaps = 5/208 (2%)
Query: 102 AREVFEEAPQRDSVSL-SSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGC 160
A+EVFE + + + +S+I Y + G + + LF R ++ GI PD+ T LS C
Sbjct: 86 AKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLR-MMNSGISPDKYTFPFGLSAC 144
Query: 161 AHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLS 220
A + G G +HG IVK G+ + + +LV+ YA+ G L +A VF+ M ERNV+S
Sbjct: 145 AKSRAKG--NGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVS 202
Query: 221 WTALICGAAQWGFCEEALVVFEKM-RVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMI 279
WT++ICG A+ F ++A+ +F +M R V PN +T V+SACA +E G + + I
Sbjct: 203 WTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFI 262
Query: 280 EDYGMEPKVHHYASLVYLVGKSGRLEEA 307
+ G+E ++LV + K ++ A
Sbjct: 263 RNSGIEVNDLMVSALVDMYMKCNAIDVA 290
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 68/134 (50%), Gaps = 4/134 (2%)
Query: 221 WTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIE 280
+ +LI G A G C EA+++F +M +G+ P++ TF LSACA + G + +I
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161
Query: 281 DYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAE 340
G + SLV+ + G L+ A ++ M E NVV + S + + + + A+
Sbjct: 162 KMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMS-ERNVVSWTSMICG---YARRDFAK 217
Query: 341 RVIEQVLRMVKPED 354
++ RMV+ E+
Sbjct: 218 DAVDLFFRMVRDEE 231
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 216 bits (550), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 122/378 (32%), Positives = 221/378 (58%), Gaps = 8/378 (2%)
Query: 3 LYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLLNA 62
+++ + +GV D ++ + SC S L ++ + H ++++ GF ++ N L++
Sbjct: 324 VFNLMMDSGVRPDRISMLSAISSC-SQLRNILWGKSCHGYVLRNGFESWD-NICNALIDM 381
Query: 63 YVLLSFLDACI-LFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMI 121
Y+ D +FD M N+ VTWN+++ GY +G+V A E FE P+++ VS +++I
Sbjct: 382 YMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTII 441
Query: 122 SAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKN 181
S ++ + +F + EG+ D VT ++ S C H+G+L L K ++ +I KN
Sbjct: 442 SGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDL--AKWIYYYIEKN 499
Query: 182 GWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVF 241
G +L+ LG TLV+M+++ G +A +F + R+V +WTA I A G E A+ +F
Sbjct: 500 GIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELF 559
Query: 242 EKMRVAGVRPNELTFTGVLSACAHAGLVEEGRR-YFKMIEDYGMEPKVHHYASLVYLVGK 300
+ M G++P+ + F G L+AC+H GLV++G+ ++ M++ +G+ P+ HY +V L+G+
Sbjct: 560 DDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGR 619
Query: 301 SGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPEDDRGIYR 360
+G LEEA ++I+ M +EPN V++ S L+AC+ EMA E++ +++ PE G Y
Sbjct: 620 AGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKI-QVLAPE-RTGSYV 677
Query: 361 LIHDLYVMGEKWEEAAKL 378
L+ ++Y +W + AK+
Sbjct: 678 LLSNVYASAGRWNDMAKV 695
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 93/376 (24%), Positives = 166/376 (44%), Gaps = 40/376 (10%)
Query: 3 LYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLLNA 62
L+ ++ +G+ D + F L +C IQ +H I+K+G+A
Sbjct: 121 LFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQ-IHGLIVKMGYA------------- 166
Query: 63 YVLLSFLDACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMIS 122
++ N+++ Y+ G++ AR+VF+E +R+ VS +SMI
Sbjct: 167 ------------------KDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMIC 208
Query: 123 AYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNG 182
Y +K + LF R++ E + P+ VT V+S CA + L G+ V+ FI +G
Sbjct: 209 GYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLE--TGEKVYAFIRNSG 266
Query: 183 WELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFE 242
E+N + + LV+MY K + A +F+ N+ A+ + G EAL VF
Sbjct: 267 IEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFN 326
Query: 243 KMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSG 302
M +GVRP+ ++ +S+C+ + G+ + G E + +L+ + K
Sbjct: 327 LMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCH 386
Query: 303 RLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPEDDRGIYRLI 362
R + A+ I M VV + S ++ E+ + + A E + PE + + I
Sbjct: 387 RQDTAFRIFDRMS-NKTVVTWNSIVAGYVENGEVDAAWETFETM-----PEKNIVSWNTI 440
Query: 363 HDLYVMGEKWEEAAKL 378
V G +EEA ++
Sbjct: 441 ISGLVQGSLFEEAIEV 456
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/208 (35%), Positives = 116/208 (55%), Gaps = 5/208 (2%)
Query: 102 AREVFEEAPQRDSVSL-SSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGC 160
A+EVFE + + + +S+I Y + G + + LF R ++ GI PD+ T LS C
Sbjct: 86 AKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLR-MMNSGISPDKYTFPFGLSAC 144
Query: 161 AHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLS 220
A + G G +HG IVK G+ + + +LV+ YA+ G L +A VF+ M ERNV+S
Sbjct: 145 AKSRAKG--NGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVS 202
Query: 221 WTALICGAAQWGFCEEALVVFEKM-RVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMI 279
WT++ICG A+ F ++A+ +F +M R V PN +T V+SACA +E G + + I
Sbjct: 203 WTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFI 262
Query: 280 EDYGMEPKVHHYASLVYLVGKSGRLEEA 307
+ G+E ++LV + K ++ A
Sbjct: 263 RNSGIEVNDLMVSALVDMYMKCNAIDVA 290
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 68/134 (50%), Gaps = 4/134 (2%)
Query: 221 WTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIE 280
+ +LI G A G C EA+++F +M +G+ P++ TF LSACA + G + +I
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161
Query: 281 DYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAE 340
G + SLV+ + G L+ A ++ M E NVV + S + + + + A+
Sbjct: 162 KMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMS-ERNVVSWTSMICG---YARRDFAK 217
Query: 341 RVIEQVLRMVKPED 354
++ RMV+ E+
Sbjct: 218 DAVDLFFRMVRDEE 231
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 215 bits (548), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 130/382 (34%), Positives = 215/382 (56%), Gaps = 16/382 (4%)
Query: 1 MHLYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLL 60
++L + HR F +F F L S + LH L + Q HA I+ G V LL
Sbjct: 49 VYLRMRNHRVSPDFHTF--PFLLPSFHNPLH-LPLGQRTHAQILLFGLDKDPF-VRTSLL 104
Query: 61 NAYVLLSFL-DACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSS 119
N Y L A +FD+ +++ WN+++ Y+++G + AR++F+E P+R+ +S S
Sbjct: 105 NMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSC 164
Query: 120 MISAYNNIGSSKQGLSLFRRVLLFEG----IKPDQVTAGAVLSGCAHMGSLGLLAGKSVH 175
+I+ Y G K+ L LFR + L + ++P++ T VLS C +G+L GK VH
Sbjct: 165 LINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALE--QGKWVH 222
Query: 176 GFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFE-LMVERNVLSWTALICGAAQWGFC 234
+I K E++ LG L++MYAK G L A VF L +++V +++A+IC A +G
Sbjct: 223 AYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLT 282
Query: 235 EEALVVFEKMRVA-GVRPNELTFTGVLSACAHAGLVEEGRRYFKM-IEDYGMEPKVHHYA 292
+E +F +M + + PN +TF G+L AC H GL+ EG+ YFKM IE++G+ P + HY
Sbjct: 283 DECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYG 342
Query: 293 SLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKP 352
+V L G+SG ++EA I +M +EP+V+++GS LS + + E +++++ + P
Sbjct: 343 CMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGDIKTCEGALKRLIEL-DP 401
Query: 353 EDDRGIYRLIHDLYVMGEKWEE 374
+ G Y L+ ++Y +W E
Sbjct: 402 MNS-GAYVLLSNVYAKTGRWME 422
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 214 bits (546), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 127/376 (33%), Positives = 216/376 (57%), Gaps = 14/376 (3%)
Query: 3 LYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKL-GFAPTHLHVANCLLN 61
+Y + + + SF LK+C + + L + + HA +L GF ++V N +++
Sbjct: 136 MYGCMRKEEITPVSFTFSALLKACGT-MKDLNLGRQFHAQTFRLRGFC--FVYVGNTMID 192
Query: 62 AYVLLSFLD-ACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSM 120
YV +D A +FDEMP R+ ++W +I Y+R G+++ A E+FE P +D V+ ++M
Sbjct: 193 MYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESLPTKDMVAWTAM 252
Query: 121 ISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVK 180
++ + ++ L F R + GI+ D+VT +S CA +G+ A ++V K
Sbjct: 253 VTGFAQNAKPQEALEYFDR-MEKSGIRADEVTVAGYISACAQLGA-SKYADRAVQ-IAQK 309
Query: 181 NGWELNAE--LGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEAL 238
+G+ + +G+ L++MY+K G + A VF M +NV +++++I G A G +EAL
Sbjct: 310 SGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGRAQEAL 369
Query: 239 VVFEKMRVAG-VRPNELTFTGVLSACAHAGLVEEGRRYFK-MIEDYGMEPKVHHYASLVY 296
+F M ++PN +TF G L AC+H+GLV++GR+ F M + +G++P HY +V
Sbjct: 370 HLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDHYTCMVD 429
Query: 297 LVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPEDDR 356
L+G++GRL+EA E+IKTM VEP+ V+G+ L AC+ H E+AE E + + +P D
Sbjct: 430 LLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNPEIAEIAAEHLFEL-EP-DII 487
Query: 357 GIYRLIHDLYVMGEKW 372
G Y L+ ++Y W
Sbjct: 488 GNYILLSNVYASAGDW 503
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 53/106 (50%), Gaps = 2/106 (1%)
Query: 172 KSVHGFIVKNGWELNAELGATLVNMYAKGGVLRN--AAMVFELMVERNVLSWTALICGAA 229
K +HG +++ G + + + L+ K GV + A V E + RN WTA+I G A
Sbjct: 66 KQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFRNPFLWTAVIRGYA 125
Query: 230 QWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRY 275
G +EA+ ++ MR + P TF+ +L AC + GR++
Sbjct: 126 IEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQF 171
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 212 bits (540), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 119/343 (34%), Positives = 203/343 (59%), Gaps = 8/343 (2%)
Query: 37 QHLHAHIIKLGFAPTHLHVANCLLNAYVLLS-FLDACILFDEMPNRNTVTWNTMIVGYSR 95
+ LH +IK G + N +L+ YV ++A +F M + V WN+MI+G+++
Sbjct: 146 RQLHGMVIKEGLEDDSF-IRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAK 204
Query: 96 SGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGA 155
G + +A+ +F+E PQR+ VS +SMIS + G K L +FR + + +KPD T +
Sbjct: 205 CGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFRE-MQEKDVKPDGFTMVS 263
Query: 156 VLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVE 215
+L+ CA++G+ G+ +H +IV+N +ELN+ + L++MY K G + VFE +
Sbjct: 264 LLNACAYLGASE--QGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPK 321
Query: 216 RNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRY 275
+ + W ++I G A GF E A+ +F ++ +G+ P+ ++F GVL+ACAH+G V +
Sbjct: 322 KQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEF 381
Query: 276 FKMI-EDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHK 334
F+++ E Y +EP + HY +V ++G +G LEEA +IK M VE + V++ S LSAC++
Sbjct: 382 FRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIG 441
Query: 335 QFEMAERVIEQVLRMVKPEDDRGIYRLIHDLYVMGEKWEEAAK 377
EMA+R + L+ + P++ G Y L+ + Y +EEA +
Sbjct: 442 NVEMAKRA-AKCLKKLDPDETCG-YVLLSNAYASYGLFEEAVE 482
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 146/301 (48%), Gaps = 22/301 (7%)
Query: 23 LKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLLNAYVLLSFLD---ACILFDEMP 79
L+ + ++ ++ +HA +IK G + + L A+ S D A ++F +
Sbjct: 28 LRLIDTQCSTMRELKQIHASLIKTGLISDTVTASRVL--AFCCASPSDMNYAYLVFTRIN 85
Query: 80 NRNTVTWNTMIVGYSRSGDVQRAREVFEE--------APQRDSVSLSSMISAYNNIGSSK 131
++N WNT+I G+SRS + A +F + PQR ++ S+ AY +G ++
Sbjct: 86 HKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQR--LTYPSVFKAYGRLGQAR 143
Query: 132 QGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGA 191
G L V+ EG++ D +L G L + A + G I G+++ A
Sbjct: 144 DGRQLHGMVIK-EGLEDDSFIRNTMLHMYVTCGCL-IEAWRIFLGMI---GFDVVA--WN 196
Query: 192 TLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRP 251
+++ +AK G++ A +F+ M +RN +SW ++I G + G ++AL +F +M+ V+P
Sbjct: 197 SMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKP 256
Query: 252 NELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEII 311
+ T +L+ACA+ G E+GR + I E +L+ + K G +EE +
Sbjct: 257 DGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVF 316
Query: 312 K 312
+
Sbjct: 317 E 317
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 212 bits (539), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 119/327 (36%), Positives = 189/327 (57%), Gaps = 7/327 (2%)
Query: 54 HVANCLLNAYVLLSFLD-ACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQR 112
H+ L+ Y +D A F +M RN M+ GYS+ G + A+ +F++ ++
Sbjct: 248 HLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKK 307
Query: 113 DSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGK 172
D V ++MISAY ++ L +F + GIKPD V+ +V+S CA++G L K
Sbjct: 308 DLVCWTTMISAYVESDYPQEALRVFEE-MCCSGIKPDVVSMFSVISACANLGILD--KAK 364
Query: 173 SVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWG 232
VH I NG E + L+NMYAK G L VFE M RNV+SW+++I + G
Sbjct: 365 WVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHG 424
Query: 233 FCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYF-KMIEDYGMEPKVHHY 291
+AL +F +M+ V PNE+TF GVL C+H+GLVEEG++ F M ++Y + PK+ HY
Sbjct: 425 EASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHY 484
Query: 292 ASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVK 351
+V L G++ L EA E+I++M V NVV++GS +SAC+ H + E+ + +++L + +
Sbjct: 485 GCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILEL-E 543
Query: 352 PEDDRGIYRLIHDLYVMGEKWEEAAKL 378
P+ D G L+ ++Y ++WE+ +
Sbjct: 544 PDHD-GALVLMSNIYAREQRWEDVRNI 569
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 103/219 (47%), Gaps = 3/219 (1%)
Query: 128 GSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNA 187
S + LF + + G + DQ + +L + + +L G +HG K +
Sbjct: 89 SSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSAL--FEGMELHGVAFKIATLCDP 146
Query: 188 ELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVA 247
+ ++MYA G + A VF+ M R+V++W +I ++G +EA +FE+M+ +
Sbjct: 147 FVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDS 206
Query: 248 GVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEA 307
V P+E+ ++SAC G + R ++ + + + H +LV + +G ++ A
Sbjct: 207 NVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMA 266
Query: 308 YEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQV 346
E + M V N+ V + +S + + + A+ + +Q
Sbjct: 267 REFFRKMSVR-NLFVSTAMVSGYSKCGRLDDAQVIFDQT 304
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 211 bits (537), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 122/379 (32%), Positives = 212/379 (55%), Gaps = 40/379 (10%)
Query: 1 MHLYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCL- 59
+ ++ ++ G F F I L +C + +L + LH L V C+
Sbjct: 147 LDIFLEMRNEGFKFSEFTISSVLSACGVNCDALEC-KKLHC-----------LSVKTCID 194
Query: 60 LNAYVLLSFLDACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSS 119
LN YV + LD Y++ G ++ A +VFE + SV+ SS
Sbjct: 195 LNLYVGTALLDL---------------------YAKCGMIKDAVQVFESMQDKSSVTWSS 233
Query: 120 MISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIV 179
M++ Y + ++ L L+RR ++ +Q T +V+ C+++ +L + GK +H I
Sbjct: 234 MVAGYVQNKNYEEALLLYRRAQRM-SLEQNQFTLSSVICACSNLAAL--IEGKQMHAVIC 290
Query: 180 KNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALV 239
K+G+ N + ++ V+MYAK G LR + ++F + E+N+ W +I G A+ +E ++
Sbjct: 291 KSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMI 350
Query: 240 VFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIE-DYGMEPKVHHYASLVYLV 298
+FEKM+ G+ PNE+TF+ +LS C H GLVEEGRR+FK++ YG+ P V HY+ +V ++
Sbjct: 351 LFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDIL 410
Query: 299 GKSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPEDDRGI 358
G++G L EAYE+IK++ +P ++GS L++C+ +K E+AE E++ + +PE + G
Sbjct: 411 GRAGLLSEAYELIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFEL-EPE-NAGN 468
Query: 359 YRLIHDLYVMGEKWEEAAK 377
+ L+ ++Y ++WEE AK
Sbjct: 469 HVLLSNIYAANKQWEEIAK 487
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 133/249 (53%), Gaps = 4/249 (1%)
Query: 87 NTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGI 146
N +I YS+ G V+ AR+VF+ +R VS ++MI Y + L +F + EG
Sbjct: 100 NVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLE-MRNEGF 158
Query: 147 KPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNA 206
K + T +VLS C + L K +H VK +LN +G L+++YAK G++++A
Sbjct: 159 KFSEFTISSVLSACG--VNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDA 216
Query: 207 AMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHA 266
VFE M +++ ++W++++ G Q EEAL+++ + + + N+ T + V+ AC++
Sbjct: 217 VQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNL 276
Query: 267 GLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSF 326
+ EG++ +I G V +S V + K G L E+Y I ++ E N+ ++ +
Sbjct: 277 AALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQ-EKNLELWNTI 335
Query: 327 LSACKEHKQ 335
+S +H +
Sbjct: 336 ISGFAKHAR 344
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 102/194 (52%), Gaps = 3/194 (1%)
Query: 156 VLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVE 215
+L CA G++ + K+ HG I++ E + L L+N Y+K G + A VF+ M+E
Sbjct: 67 ILQLCARNGAV--MEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLE 124
Query: 216 RNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRY 275
R+++SW +I + EAL +F +MR G + +E T + VLSAC E ++
Sbjct: 125 RSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKL 184
Query: 276 FKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQ 335
+ ++ ++ +L+ L K G +++A ++ ++M+ + + V + S ++ ++K
Sbjct: 185 HCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQ-DKSSVTWSSMVAGYVQNKN 243
Query: 336 FEMAERVIEQVLRM 349
+E A + + RM
Sbjct: 244 YEEALLLYRRAQRM 257
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 211 bits (537), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 116/339 (34%), Positives = 199/339 (58%), Gaps = 10/339 (2%)
Query: 39 LHAHIIKLGFAPTHLHVANCLLNAYVLLSFLDACI--LFDEMPNRNTVTWNTMIVGYSRS 96
LH+ + GF L+ AY L L C +FDEM R+ WN MI GY R
Sbjct: 104 LHSQFFRSGFESDSF-CCTTLITAYAKLGAL-CCARRVFDEMSKRDVPVWNAMITGYQRR 161
Query: 97 GDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAV 156
GD++ A E+F+ P+++ S +++IS ++ G+ + L +F + + +KP+ +T +V
Sbjct: 162 GDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSV 221
Query: 157 LSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVF-ELMVE 215
L CA++G L + G+ + G+ +NG+ N + + MY+K G++ A +F EL +
Sbjct: 222 LPACANLGELEI--GRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQ 279
Query: 216 RNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRY 275
RN+ SW ++I A G +EAL +F +M G +P+ +TF G+L AC H G+V +G+
Sbjct: 280 RNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQEL 339
Query: 276 FKMIED-YGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHK 334
FK +E+ + + PK+ HY ++ L+G+ G+L+EAY++IKTM ++P+ VV+G+ L AC H
Sbjct: 340 FKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHG 399
Query: 335 QFEMAERVIEQVLRMVKPEDDRGIYRLIHDLYVMGEKWE 373
E+AE E + ++ +P + G ++ ++Y EKW+
Sbjct: 400 NVEIAEIASEALFKL-EPTNP-GNCVIMSNIYAANEKWD 436
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 210 bits (535), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 122/379 (32%), Positives = 212/379 (55%), Gaps = 9/379 (2%)
Query: 1 MHLYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLL 60
+++Y + GV D ++ + SC S L L + + ++ + G T + + N L+
Sbjct: 242 IYVYKLMESEGVKPDDVTMIGLVSSC-SMLGDLNRGKEFYEYVKENGLRMT-IPLVNALM 299
Query: 61 NAYVLLSFL-DACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSS 119
+ + + +A +FD + R V+W TMI GY+R G + +R++F++ ++D V ++
Sbjct: 300 DMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNA 359
Query: 120 MISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIV 179
MI + L+LF+ + KPD++T LS C+ +G+L + G +H +I
Sbjct: 360 MIGGSVQAKRGQDALALFQE-MQTSNTKPDEITMIHCLSACSQLGALDV--GIWIHRYIE 416
Query: 180 KNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALV 239
K LN LG +LV+MYAK G + A VF + RN L++TA+I G A G A+
Sbjct: 417 KYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAIS 476
Query: 240 VFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYF-KMIEDYGMEPKVHHYASLVYLV 298
F +M AG+ P+E+TF G+LSAC H G+++ GR YF +M + + P++ HY+ +V L+
Sbjct: 477 YFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLL 536
Query: 299 GKSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPEDDRGI 358
G++G LEEA ++++M +E + V+G+ L C+ H E+ E+ +++L + D GI
Sbjct: 537 GRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLEL--DPSDSGI 594
Query: 359 YRLIHDLYVMGEKWEEAAK 377
Y L+ +Y WE+A +
Sbjct: 595 YVLLDGMYGEANMWEDAKR 613
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 132/255 (51%), Gaps = 34/255 (13%)
Query: 87 NTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGI 146
N I ++ GD++ AR+VF+E+P RD VS + +I+ Y IG +++ + ++ +++ EG+
Sbjct: 195 NASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVY-KLMESEGV 253
Query: 147 KPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNA 206
KPD VT ++S C+ +G L GK + ++ +NG + L L++M++K G + A
Sbjct: 254 KPDDVTMIGLVSSCSMLGDLN--RGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEA 311
Query: 207 AMVFELMVERNVLSWTALICGAAQWGFCE------------------------------- 235
+F+ + +R ++SWT +I G A+ G +
Sbjct: 312 RRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQ 371
Query: 236 EALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLV 295
+AL +F++M+ + +P+E+T LSAC+ G ++ G + IE Y + V SLV
Sbjct: 372 DALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLV 431
Query: 296 YLVGKSGRLEEAYEI 310
+ K G + EA +
Sbjct: 432 DMYAKCGNISEALSV 446
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 136/300 (45%), Gaps = 47/300 (15%)
Query: 23 LKSCTSHLHSLTIIQHLHAHIIKLG-----FAPTHLHVANCLLNAYVLLSFLDACILFDE 77
L+ C LH ++ + A +I G FA + L +A C L+ L + + +
Sbjct: 60 LEKCKLLLH----LKQIQAQMIINGLILDPFASSRL-IAFCALSESRYLDY--SVKILKG 112
Query: 78 MPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLF 137
+ N N +WN I G+S S E P K+ L+
Sbjct: 113 IENPNIFSWNVTIRGFSES-----------ENP--------------------KESFLLY 141
Query: 138 RRVLLFEGI--KPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVN 195
+++L +PD T + CA + L G + G ++K EL + + ++
Sbjct: 142 KQMLRHGCCESRPDHFTYPVLFKVCADLRLSSL--GHMILGHVLKLRLELVSHVHNASIH 199
Query: 196 MYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELT 255
M+A G + NA VF+ R+++SW LI G + G E+A+ V++ M GV+P+++T
Sbjct: 200 MFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVT 259
Query: 256 FTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMK 315
G++S+C+ G + G+ +++ +++ G+ + +L+ + K G + EA I ++
Sbjct: 260 MIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLE 319
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 209 bits (531), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 127/375 (33%), Positives = 211/375 (56%), Gaps = 15/375 (4%)
Query: 1 MHLYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLL 60
M L+ ++ R V D +V C + L L Q H +K+G T + V N L+
Sbjct: 96 MKLFVEMRRKRVEIDDVSVVCLFGVC-AKLEDLGFAQQGHGVAVKMGVL-TSVKVCNALM 153
Query: 61 NAYVLLSFLDACI-LFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSS 119
+ Y + +F+E+ ++ V+W ++ + ++R REVF E P+R++V+ +
Sbjct: 154 DMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFHEMPERNAVAWTV 213
Query: 120 MISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIV 179
M++ Y G +++ L L ++ G + VT ++LS CA G+L + G+ VH + +
Sbjct: 214 MVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNL--VVGRWVHVYAL 271
Query: 180 KNGWELNAE-------LGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWG 232
K + E +G LV+MYAK G + ++ VF LM +RNV++W AL G A G
Sbjct: 272 KKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLMRKRNVVTWNALFSGLAMHG 331
Query: 233 FCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYA 292
+ +F +M + V+P++LTFT VLSAC+H+G+V+EG R F + YG+EPKV HYA
Sbjct: 332 KGRMVIDMFPQM-IREVKPDDLTFTAVLSACSHSGIVDEGWRCFHSLRFYGLEPKVDHYA 390
Query: 293 SLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKP 352
+V L+G++G +EEA +++ M V PN VV GS L +C H + E+AER+ ++++M
Sbjct: 391 CMVDLLGRAGLIEEAEILMREMPVPPNEVVLGSLLGSCSVHGKVEIAERIKRELIQMSPG 450
Query: 353 EDDRGIYRLIHDLYV 367
+ I L+ ++YV
Sbjct: 451 NTEYQI--LMSNMYV 463
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 86/376 (22%), Positives = 152/376 (40%), Gaps = 81/376 (21%)
Query: 23 LKSCTSHLHSLTIIQHLHAHIIKLGF--APTHLHVANCLLNAYVLL-SFLDACILFDEMP 79
L+ C +H L + LHA + G AP +++N L Y + A LFDE+P
Sbjct: 13 LRHC-AHRSFLRPGKELHAVLTTSGLKKAPRS-YLSNALFQFYASSGEMVTAQKLFDEIP 70
Query: 80 --NRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLF 137
++ V W T++ +SR G + + ++F E ++
Sbjct: 71 LSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKR------------------------ 106
Query: 138 RRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMY 197
++ D V+ + CA + LG + HG VK G + ++ L++MY
Sbjct: 107 --------VEIDDVSVVCLFGVCAKLEDLGF--AQQGHGVAVKMGVLTSVKVCNALMDMY 156
Query: 198 AKGGVLRNAAMVFELMVERNVLSWTALICGAAQW-------------------------- 231
K G++ +FE + E++V+SWT ++ +W
Sbjct: 157 GKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFHEMPERNAVAWTVMVA 216
Query: 232 -----GFCEEALVVFEKMRV-AGVRPNELTFTGVLSACAHAGLVEEGR-------RYFKM 278
GF E L + +M G N +T +LSACA +G + GR + M
Sbjct: 217 GYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNLVVGRWVHVYALKKEMM 276
Query: 279 IEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEM 338
+ + V +LV + K G ++ + + + M+ + NVV + + S H + M
Sbjct: 277 MGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLMR-KRNVVTWNALFSGLAMHGKGRM 335
Query: 339 AERVIEQVLRMVKPED 354
+ Q++R VKP+D
Sbjct: 336 VIDMFPQMIREVKPDD 351
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 208 bits (530), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 130/393 (33%), Positives = 217/393 (55%), Gaps = 18/393 (4%)
Query: 1 MHLYSKLHRTGVPFDSFCIVFTLK-SCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCL 59
+H S +++ PFDSF +F LK S SL + LH +KLGF +H++V L
Sbjct: 106 LHFLSDHNKSLPPFDSFTYLFLLKASSNPRFPSLLLGIGLHGLTLKLGFE-SHVYVQTAL 164
Query: 60 LNAYVLL-SFLDACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLS 118
+ Y++ + +DA +FDEMP RN VTWN MI G + GD ++A E+ P R VS +
Sbjct: 165 VGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFLEKMPNRTVVSWT 224
Query: 119 SMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFI 178
++I Y + K+ + LF R++ + IKP+++T A+L ++G L + SVH ++
Sbjct: 225 TIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDLKMCG--SVHAYV 282
Query: 179 VKNGW-ELNAELGATLVNMYAKGGVLRNAAMVFELMVE-----RNVLSWTALICGAAQWG 232
K G+ + + +L++ YAK G +++A F+ +E +N++SWT +I A G
Sbjct: 283 GKRGFVPCDIRVTNSLIDAYAKCGCIQSA---FKFFIEIPNGRKNLVSWTTMISAFAIHG 339
Query: 233 FCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYF--KMIEDYGMEPKVHH 290
+EA+ +F+ M G++PN +T VL+AC+H GL EE F M+ +Y + P V H
Sbjct: 340 MGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNEYKITPDVKH 399
Query: 291 YASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMV 350
Y LV ++ + GRLEEA +I + +E VV+ L AC + E+AERV +++ +
Sbjct: 400 YGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGACSVYDDAELAERVTRKLMELE 459
Query: 351 KPEDDRGIYRLIHDLYVMGEKWEEAAKLGPGFD 383
+ G Y L+ +++ ++ +A + D
Sbjct: 460 RSHG--GDYVLMSNIFCGTGRFLDAQRFRKQMD 490
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 208 bits (530), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 131/380 (34%), Positives = 202/380 (53%), Gaps = 39/380 (10%)
Query: 3 LYSKLHR-TGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLLN 61
L+ L R + +P + F LK C L +Q +H I GF L + L++
Sbjct: 99 LFRSLRRNSSLPANPLSSSFALKCCIKSGDLLGGLQ-IHGKIFSDGFLSDSL-LMTTLMD 156
Query: 62 AYVLL-SFLDACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSM 120
Y + DAC +FDE+P R+TV+WN + Y R+ +R R+V
Sbjct: 157 LYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRN---KRTRDV--------------- 198
Query: 121 ISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVK 180
+ ++ + + G +KPD VT L CA++G+L GK VH FI +
Sbjct: 199 LVLFDKMKNDVDGC-----------VKPDGVTCLLALQACANLGALDF--GKQVHDFIDE 245
Query: 181 NGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVV 240
NG L TLV+MY++ G + A VF M ERNV+SWTALI G A GF +EA+
Sbjct: 246 NGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEA 305
Query: 241 FEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIE--DYGMEPKVHHYASLVYLV 298
F +M G+ P E T TG+LSAC+H+GLV EG +F + ++ ++P +HHY +V L+
Sbjct: 306 FNEMLKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLL 365
Query: 299 GKSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPEDDRGI 358
G++ L++AY +IK+M+++P+ ++ + L AC+ H E+ ERVI ++ + E G
Sbjct: 366 GRARLLDKAYSLIKSMEMKPDSTIWRTLLGACRVHGDVELGERVISHLIELKAEE--AGD 423
Query: 359 YRLIHDLYVMGEKWEEAAKL 378
Y L+ + Y KWE+ +L
Sbjct: 424 YVLLLNTYSTVGKWEKVTEL 443
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 208 bits (530), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 125/381 (32%), Positives = 209/381 (54%), Gaps = 40/381 (10%)
Query: 3 LYSKLHRTGVPFDSFCIVFTLKSCTSH---LHSLTIIQHLHAHIIKLGFAPTHLHVANCL 59
LY K++R GV D F + LK+C + ++ L + +HAH+ + G++ HV
Sbjct: 165 LYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSS---HV---- 217
Query: 60 LNAYVLLSFLDACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSS 119
Y++ + +D Y+R G V A VF P R+ VS S+
Sbjct: 218 ---YIMTTLVDM---------------------YARFGCVDYASYVFGGMPVRNVVSWSA 253
Query: 120 MISAYNNIGSSKQGLSLFRRVLL-FEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFI 178
MI+ Y G + + L FR ++ + P+ VT +VL CA + +L GK +HG+I
Sbjct: 254 MIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALE--QGKLIHGYI 311
Query: 179 VKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEAL 238
++ G + + + LV MY + G L VF+ M +R+V+SW +LI G+ ++A+
Sbjct: 312 LRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAI 371
Query: 239 VVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFK-MIEDYGMEPKVHHYASLVYL 297
+FE+M G P +TF VL AC+H GLVEEG+R F+ M D+G++P++ HYA +V L
Sbjct: 372 QIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDL 431
Query: 298 VGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPEDDRG 357
+G++ RL+EA ++++ M+ EP V+GS L +C+ H E+AER ++ + +P++ G
Sbjct: 432 LGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFAL-EPKNA-G 489
Query: 358 IYRLIHDLYVMGEKWEEAAKL 378
Y L+ D+Y + W+E ++
Sbjct: 490 NYVLLADIYAEAQMWDEVKRV 510
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 107/243 (44%), Gaps = 16/243 (6%)
Query: 115 VSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSV 174
+S + +I + G KQ + RVL E P Q T ++ C H SL V
Sbjct: 47 ISNNQLIQSLCKEGKLKQAI----RVLSQES-SPSQQTYELLILCCGHRSSLS--DALRV 99
Query: 175 HGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFC 234
H I+ NG + + L L+ MY+ G + A VF+ +R + W AL G
Sbjct: 100 HRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHG 159
Query: 235 EEALVVFEKMRVAGVRPNELTFTGVLSACAHAGL----VEEGRRYFKMIEDYGMEPKVHH 290
EE L ++ KM GV + T+T VL AC + + +G+ + G V+
Sbjct: 160 EEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYI 219
Query: 291 YASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSAC--KEHKQFEMAERVIEQVLR 348
+LV + + G ++ A + M V NVV + + + AC K K FE A R +++R
Sbjct: 220 MTTLVDMYARFGCVDYASYVFGGMPVR-NVVSWSAMI-ACYAKNGKAFE-ALRTFREMMR 276
Query: 349 MVK 351
K
Sbjct: 277 ETK 279
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 207 bits (527), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 133/392 (33%), Positives = 208/392 (53%), Gaps = 15/392 (3%)
Query: 1 MHLYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGF---APTHLHVAN 57
+ +S + G+ D + LKSC+S L L + +H +I+ GF + V
Sbjct: 87 LSFFSSMKSRGIWADEYTYAPLLKSCSS-LSDLRFGKCVHGELIRTGFHRLGKIRIGVVE 145
Query: 58 CLLNAYVLLSFLDACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSL 117
+ + DA +FDEM RN V WN MI G+ SGDV+R +F++ +R VS
Sbjct: 146 LYTSGGRMG---DAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSW 202
Query: 118 SSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGF 177
+SMIS+ + G ++ L LF ++ +G PD+ T VL A +G L GK +H
Sbjct: 203 NSMISSLSKCGRDREALELFCE-MIDQGFDPDEATVVTVLPISASLGVLD--TGKWIHST 259
Query: 178 IVKNG-WELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEE 236
+G ++ +G LV+ Y K G L A +F M RNV+SW LI G+A G E
Sbjct: 260 AESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQRRNVVSWNTLISGSAVNGKGEF 319
Query: 237 ALVVFEKMRVAG-VRPNELTFTGVLSACAHAGLVEEGRRYFK-MIEDYGMEPKVHHYASL 294
+ +F+ M G V PNE TF GVL+ C++ G VE G F M+E + +E + HY ++
Sbjct: 320 GIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMMERFKLEARTEHYGAM 379
Query: 295 VYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPED 354
V L+ +SGR+ EA++ +K M V N ++GS LSAC+ H ++AE ++++ ++P
Sbjct: 380 VDLMSRSGRITEAFKFLKNMPVNANAAMWGSLLSACRSHGDVKLAEVAAMELVK-IEP-G 437
Query: 355 DRGIYRLIHDLYVMGEKWEEAAKLGPGFDFNR 386
+ G Y L+ +LY +W++ K+ NR
Sbjct: 438 NSGNYVLLSNLYAEEGRWQDVEKVRTLMKKNR 469
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 206 bits (524), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 125/376 (33%), Positives = 205/376 (54%), Gaps = 13/376 (3%)
Query: 8 HRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLLNAYVLLS 67
+ + FD IV TL +C S L +L I + ++ ++ + + N L++ +
Sbjct: 140 QESNLKFDEGTIVSTLSAC-SALKNLEIGERIYRFVVTE--FEMSVRIGNALVDMFCKCG 196
Query: 68 FLD-ACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNN 126
LD A +FD M ++N W +M+ GY +G + AR +FE +P +D V ++M++ Y
Sbjct: 197 CLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQ 256
Query: 127 IGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELN 186
+ L LFR + GI+PD ++L+GCA G+L GK +HG+I +N ++
Sbjct: 257 FNRFDEALELFR-CMQTAGIRPDNFVLVSLLTGCAQTGALE--QGKWIHGYINENRVTVD 313
Query: 187 AELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRV 246
+G LV+MYAK G + A VF + ER+ SWT+LI G A G AL ++ +M
Sbjct: 314 KVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLYYEMEN 373
Query: 247 AGVRPNELTFTGVLSACAHAGLVEEGRRYF-KMIEDYGMEPKVHHYASLVYLVGKSGRLE 305
GVR + +TF VL+AC H G V EGR+ F M E + ++PK H + L+ L+ ++G L+
Sbjct: 374 VGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLD 433
Query: 306 EAYEIIKTMKVEPN---VVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPEDDRGIYRLI 362
EA E+I M+ E + V V+ S LSA + + ++AERV E++ ++ D + L+
Sbjct: 434 EAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIAERVAEKLEKV--EVSDSSAHTLL 491
Query: 363 HDLYVMGEKWEEAAKL 378
+Y +WE+ +
Sbjct: 492 ASVYASANRWEDVTNV 507
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 128/260 (49%), Gaps = 34/260 (13%)
Query: 87 NTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGI 146
N+++ Y+ G ++ +VF+E PQRD VS + +IS+Y G + + +F+R+ +
Sbjct: 85 NSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNL 144
Query: 147 KPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNA 206
K D+ T + LS C+ + +L + G+ ++ F+V +E++ +G LV+M+ K G L A
Sbjct: 145 KFDEGTIVSTLSACSALKNLEI--GERIYRFVVTE-FEMSVRIGNALVDMFCKCGCLDKA 201
Query: 207 AMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEK----------------------- 243
VF+ M ++NV WT+++ G G +EA V+FE+
Sbjct: 202 RAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFD 261
Query: 244 --------MRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLV 295
M+ AG+RP+ +L+ CA G +E+G+ I + + +LV
Sbjct: 262 EALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALV 321
Query: 296 YLVGKSGRLEEAYEIIKTMK 315
+ K G +E A E+ +K
Sbjct: 322 DMYAKCGCIETALEVFYEIK 341
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 132/263 (50%), Gaps = 18/263 (6%)
Query: 124 YNNIGSSKQGLSLFRRVL-LF-----EGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGF 177
YN + S F +VL LF +G+ PD T VL + + + G+ VHG+
Sbjct: 14 YNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKV--IEGEKVHGY 71
Query: 178 IVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEA 237
VK G E ++ + +L+ MYA G + VF+ M +R+V+SW LI G E+A
Sbjct: 72 AVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDA 131
Query: 238 LVVFEKM-RVAGVRPNELTFTGVLSACAHAGLVEEGRRYFK-MIEDYGMEPKVHHYASLV 295
+ VF++M + + ++ +E T LSAC+ +E G R ++ ++ ++ M ++ + +LV
Sbjct: 132 IGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTEFEMSVRIGN--ALV 189
Query: 296 YLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPEDD 355
+ K G L++A + +M+ + NV + S + + + A + E+ P D
Sbjct: 190 DMFCKCGCLDKARAVFDSMR-DKNVKCWTSMVFGYVSTGRIDEARVLFER-----SPVKD 243
Query: 356 RGIYRLIHDLYVMGEKWEEAAKL 378
++ + + YV +++EA +L
Sbjct: 244 VVLWTAMMNGYVQFNRFDEALEL 266
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 206 bits (523), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 116/311 (37%), Positives = 173/311 (55%), Gaps = 5/311 (1%)
Query: 70 DACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGS 129
DA F+++P +N W+ M+ GY R GDV AR +F RD V +++I+ Y G
Sbjct: 195 DARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGY 254
Query: 130 SKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAEL 189
S + F + EG +PD VT ++LS CA G L + G+ VH I G ELN +
Sbjct: 255 SDDAIDAFFN-MQGEGYEPDAVTVSSILSACAQSGRLDV--GREVHSLINHRGIELNQFV 311
Query: 190 GATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGV 249
L++MYAK G L NA VFE + R+V ++I A G +EAL +F M +
Sbjct: 312 SNALIDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDL 371
Query: 250 RPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYE 309
+P+E+TF VL+AC H G + EG + F ++ ++P V H+ L++L+G+SG+L+EAY
Sbjct: 372 KPDEITFIAVLTACVHGGFLMEGLKIFSEMKTQDVKPNVKHFGCLIHLLGRSGKLKEAYR 431
Query: 310 IIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPEDDRGIYRL--IHDLYV 367
++K M V+PN V G+ L ACK H EMAE+V++ + + L I +LY
Sbjct: 432 LVKEMHVKPNDTVLGALLGACKVHMDTEMAEQVMKIIETAGSITNSYSENHLASISNLYA 491
Query: 368 MGEKWEEAAKL 378
E+W+ A L
Sbjct: 492 HTERWQTAEAL 502
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 95/335 (28%), Positives = 164/335 (48%), Gaps = 14/335 (4%)
Query: 3 LYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLLNA 62
LY + R GV F + + L++C + + + + LH+ IK G + + V + L++
Sbjct: 33 LYGGIRRRGVYFPGW-VPLILRACACVVPRVVLGKLLHSESIKFGVC-SDVMVGSSLISM 90
Query: 63 YVLLS-FLDACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEE-APQRDSVSLSSM 120
Y + A +FDEMP RN TWN MI GY +GD A +FEE + R++V+ M
Sbjct: 91 YGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLASGLFEEISVCRNTVTWIEM 150
Query: 121 ISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVK 180
I Y ++ LF R + FE V A +V+ G ++ + + + I
Sbjct: 151 IKGYGKRIEIEKARELFER-MPFE---LKNVKAWSVMLG-VYVNNRKMEDARKFFEDIP- 204
Query: 181 NGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVV 240
E NA + + +++ Y + G + A +F + R+++ W LI G AQ G+ ++A+
Sbjct: 205 ---EKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDA 261
Query: 241 FEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGK 300
F M+ G P+ +T + +LSACA +G ++ GR +I G+E +L+ + K
Sbjct: 262 FFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAK 321
Query: 301 SGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQ 335
G LE A + +++ V +V S +S H +
Sbjct: 322 CGDLENATSVFESISVR-SVACCNSMISCLAIHGK 355
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 82/165 (49%), Gaps = 14/165 (8%)
Query: 117 LSSMISAYNNIGSSKQGLSLF----RRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGK 172
+S++I + + GS Q L L+ RR + F G P +L CA + +L GK
Sbjct: 14 VSNLIKNHISRGSPIQALVLYGGIRRRGVYFPGWVP------LILRACACVVPRVVL-GK 66
Query: 173 SVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWG 232
+H +K G + +G++L++MY K G + +A VF+ M ERNV +W A+I G G
Sbjct: 67 LLHSESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNG 126
Query: 233 FCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFK 277
A +FE++ V N +T+ ++ +E+ R F+
Sbjct: 127 DAVLASGLFEEISVC---RNTVTWIEMIKGYGKRIEIEKARELFE 168
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 206 bits (523), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 108/301 (35%), Positives = 183/301 (60%), Gaps = 19/301 (6%)
Query: 82 NTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVL 141
N + ++I Y++ GD++ AR +F+ P+R VS +S+I+ Y+ G +++ L +F +L
Sbjct: 250 NVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDML 309
Query: 142 LFEGIKPDQVT-----AGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNM 196
GI PD+VT +++ GC+ +G +S+H ++ K G+ +A + LVNM
Sbjct: 310 DL-GIAPDKVTFLSVIRASMIQGCSQLG-------QSIHAYVSKTGFVKDAAIVCALVNM 361
Query: 197 YAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAG-VRPNELT 255
YAK G +A FE + +++ ++WT +I G A G EAL +F++M+ G P+ +T
Sbjct: 362 YAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGIT 421
Query: 256 FTGVLSACAHAGLVEEGRRYFKMIED-YGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTM 314
+ GVL AC+H GLVEEG+RYF + D +G+EP V HY +V ++ ++GR EEA ++KTM
Sbjct: 422 YLGVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTM 481
Query: 315 KVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPED-DRGIYRLIHDLYVMGEKWE 373
V+PNV ++G+ L+ C H+ E+ +R+ V +PE+ GIY L+ ++Y +W
Sbjct: 482 PVKPNVNIWGALLNGCDIHENLELTDRIRSMV---AEPEELGSGIYVLLSNIYAKAGRWA 538
Query: 374 E 374
+
Sbjct: 539 D 539
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 85/326 (26%), Positives = 144/326 (44%), Gaps = 43/326 (13%)
Query: 3 LYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLLNA 62
Y ++ R G D F + LK+C S L + +H ++K GF +++V+ CLL+
Sbjct: 94 FYQEMLRKGYSPDYFTFPYVLKAC-SGLRDIQFGSCVHGFVVKTGFE-VNMYVSTCLLHM 151
Query: 63 YVLLSFLDACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMIS 122
Y+ G+V VFE+ PQ + V+ S+IS
Sbjct: 152 YMC------------------------------CGEVNYGLRVFEDIPQWNVVAWGSLIS 181
Query: 123 AYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNG 182
+ N + FR + G+K ++ +L C + + GK HGF+ G
Sbjct: 182 GFVNNNRFSDAIEAFRE-MQSNGVKANETIMVDLLVACGRCKDI--VTGKWFHGFLQGLG 238
Query: 183 WE--------LNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFC 234
++ N L +L++MYAK G LR A +F+ M ER ++SW ++I G +Q G
Sbjct: 239 FDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDA 298
Query: 235 EEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASL 294
EEAL +F M G+ P+++TF V+ A G + G+ + G +L
Sbjct: 299 EEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCAL 358
Query: 295 VYLVGKSGRLEEAYEIIKTMKVEPNV 320
V + K+G E A + + ++ + +
Sbjct: 359 VNMYAKTGDAESAKKAFEDLEKKDTI 384
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 141/329 (42%), Gaps = 44/329 (13%)
Query: 19 IVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLLNAYVLLSFLDACILFDEM 78
I+ L++C SL + LH +IK ++ + N L +D C
Sbjct: 9 ILSQLENC----RSLVELNQLHGLMIK----------SSVIRNVIPLSRLIDFC------ 48
Query: 79 PNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFR 138
T TM + Y+RS VFE +SMI Y+N + + L +F
Sbjct: 49 ----TTCPETMNLSYARS--------VFESIDCPSVYIWNSMIRGYSNSPNPDKAL-IFY 95
Query: 139 RVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYA 198
+ +L +G PD T VL C+ + + G VHGF+VK G+E+N + L++MY
Sbjct: 96 QEMLRKGYSPDYFTFPYVLKACSGLRDIQF--GSCVHGFVVKTGFEVNMYVSTCLLHMYM 153
Query: 199 KGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTG 258
G + VFE + + NV++W +LI G +A+ F +M+ GV+ NE
Sbjct: 154 CCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVD 213
Query: 259 VLSACAHAGLVEEGRRYFKMIEDYGMEP--------KVHHYASLVYLVGKSGRLEEAYEI 310
+L AC + G+ + ++ G +P V SL+ + K G L A +
Sbjct: 214 LLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYL 273
Query: 311 IKTMKVEPNVVVFGSFLSACKEHKQFEMA 339
M E +V + S ++ ++ E A
Sbjct: 274 FDGMP-ERTLVSWNSIITGYSQNGDAEEA 301
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 206 bits (523), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 106/293 (36%), Positives = 182/293 (62%), Gaps = 6/293 (2%)
Query: 87 NTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGI 146
++++ Y++S ++ + VF RD +S +S+++ Y G + L LFR+++ + +
Sbjct: 281 SSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAK-V 339
Query: 147 KPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNA 206
KP V +V+ CAH+ +L L GK +HG++++ G+ N + + LV+MY+K G ++ A
Sbjct: 340 KPGAVAFSSVIPACAHLATLHL--GKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAA 397
Query: 207 AMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHA 266
+F+ M + +SWTA+I G A G EA+ +FE+M+ GV+PN++ F VL+AC+H
Sbjct: 398 RKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHV 457
Query: 267 GLVEEGRRYFK-MIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGS 325
GLV+E YF M + YG+ ++ HYA++ L+G++G+LEEAY I M VEP V+ +
Sbjct: 458 GLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWST 517
Query: 326 FLSACKEHKQFEMAERVIEQVLRMVKPEDDRGIYRLIHDLYVMGEKWEEAAKL 378
LS+C HK E+AE+V E++ + ++ G Y L+ ++Y +W+E AKL
Sbjct: 518 LLSSCSVHKNLELAEKVAEKIFTV--DSENMGAYVLMCNMYASNGRWKEMAKL 568
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 90/304 (29%), Positives = 156/304 (51%), Gaps = 19/304 (6%)
Query: 23 LKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLLNAYVLLSFLDACI----LFDEM 78
LKSCT + L + +H I++LG L+ N L+N Y L + + I +FDEM
Sbjct: 112 LKSCT-MMMDLRFGESVHGFIVRLGM-DCDLYTGNALMNMYAKLLGMGSKISVGNVFDEM 169
Query: 79 PNRNT------VTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQ 132
P R + V T I+ + + R VFE P++D VS +++I+ Y G +
Sbjct: 170 PQRTSNSGDEDVKAETCIMPFG----IDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYED 225
Query: 133 GLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGAT 192
L + R + + +KPD T +VL + + ++ GK +HG++++ G + + +G++
Sbjct: 226 ALRMVREMGTTD-LKPDSFTLSSVLPIFSEY--VDVIKGKEIHGYVIRKGIDSDVYIGSS 282
Query: 193 LVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPN 252
LV+MYAK + ++ VF + R+ +SW +L+ G Q G EAL +F +M A V+P
Sbjct: 283 LVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPG 342
Query: 253 ELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIK 312
+ F+ V+ ACAH + G++ + G + ++LV + K G ++ A +I
Sbjct: 343 AVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFD 402
Query: 313 TMKV 316
M V
Sbjct: 403 RMNV 406
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 98/221 (44%), Gaps = 40/221 (18%)
Query: 28 SHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLLNAYVLLSFLDAC-ILFDEMPNRNTVTW 86
+HL +L + + LH ++++ GF +++ +A+ L++ Y + A +FD M + V+W
Sbjct: 354 AHLATLHLGKQLHGYVLRGGFG-SNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSW 412
Query: 87 NTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGI 146
+I+G++ G A +FEE + +G+
Sbjct: 413 TAIIMGHALHGHGHEAVSLFEEMKR--------------------------------QGV 440
Query: 147 KPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELG--ATLVNMYAKGGVLR 204
KP+QV AVL+ C+H+G + G + + + LN EL A + ++ + G L
Sbjct: 441 KPNQVAFVAVLTACSHVGLVDEAWG---YFNSMTKVYGLNQELEHYAAVADLLGRAGKLE 497
Query: 205 NA-AMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKM 244
A + ++ VE W+ L+ + E A V EK+
Sbjct: 498 EAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKI 538
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 206 bits (523), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 108/294 (36%), Positives = 190/294 (64%), Gaps = 7/294 (2%)
Query: 87 NTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGI 146
N+++ Y+ GDV A +VF++ P++D V+ +S+I+ + G ++ L+L+ + +GI
Sbjct: 160 NSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTE-MNSKGI 218
Query: 147 KPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNA 206
KPD T ++LS CA +G+L L GK VH +++K G N L+++YA+ G + A
Sbjct: 219 KPDGFTIVSLLSACAKIGALTL--GKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEA 276
Query: 207 AMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMR-VAGVRPNELTFTGVLSACAH 265
+F+ MV++N +SWT+LI G A GF +EA+ +F+ M G+ P E+TF G+L AC+H
Sbjct: 277 KTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSH 336
Query: 266 AGLVEEGRRYFK-MIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFG 324
G+V+EG YF+ M E+Y +EP++ H+ +V L+ ++G++++AYE IK+M ++PNVV++
Sbjct: 337 CGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWR 396
Query: 325 SFLSACKEHKQFEMAERVIEQVLRMVKPEDDRGIYRLIHDLYVMGEKWEEAAKL 378
+ L AC H ++AE Q+L++ +P + G Y L+ ++Y ++W + K+
Sbjct: 397 TLLGACTVHGDSDLAEFARIQILQL-EP-NHSGDYVLLSNMYASEQRWSDVQKI 448
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 124/227 (54%), Gaps = 4/227 (1%)
Query: 102 AREVFEEAPQRDSVSL-SSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGC 160
A +VF + + +V + +++I Y IG+S SL+R + + ++PD T ++
Sbjct: 72 AHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAV 131
Query: 161 AHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLS 220
M + L G+++H ++++G+ + +L+++YA G + +A VF+ M E+++++
Sbjct: 132 TTMADVRL--GETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVA 189
Query: 221 WTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIE 280
W ++I G A+ G EEAL ++ +M G++P+ T +LSACA G + G+R +
Sbjct: 190 WNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMI 249
Query: 281 DYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFL 327
G+ +H L+ L + GR+EEA + M V+ N V + S +
Sbjct: 250 KVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEM-VDKNSVSWTSLI 295
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 120/264 (45%), Gaps = 62/264 (23%)
Query: 3 LYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLLNA 62
LY++++ G+ D F IV L +C + + +LT+ + +H ++IK+G +LH +N LL+
Sbjct: 209 LYTEMNSKGIKPDGFTIVSLLSAC-AKIGALTLGKRVHVYMIKVGLT-RNLHSSNVLLDL 266
Query: 63 YVLLSFLD-ACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMI 121
Y ++ A LFDEM ++N+V+W ++IVG
Sbjct: 267 YARCGRVEEAKTLFDEMVDKNSVSWTSLIVGL---------------------------- 298
Query: 122 SAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKN 181
A N G K+ + LF+ + EG+ P ++T +L C+H G +VK
Sbjct: 299 -AVNGFG--KEAIELFKYMESTEGLLPCEITFVGILYACSHCG-------------MVKE 342
Query: 182 GWEL------------NAELGATLVNMYAKGGVLRNAAMVFELM-VERNVLSWTALICGA 228
G+E E +V++ A+ G ++ A + M ++ NV+ W L+
Sbjct: 343 GFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGAC 402
Query: 229 AQWGFCEEALVVFEKMRVAGVRPN 252
G + L F ++++ + PN
Sbjct: 403 TVHG--DSDLAEFARIQILQLEPN 424
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 206 bits (523), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 110/338 (32%), Positives = 194/338 (57%), Gaps = 11/338 (3%)
Query: 47 GFAPTHLHVANCLLNAYVLLSFLDACILFDEMPNRNTVTW-----NTMIVGYSRSGDVQR 101
G +P ++ +LN LD E N + + N ++ Y++ G +Q
Sbjct: 392 GISP-DVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQE 450
Query: 102 AREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCA 161
A VF E +D +S +++I Y+ + + LSLF +L + PD+ T VL CA
Sbjct: 451 AELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACA 510
Query: 162 HMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSW 221
+ + G+ +HG+I++NG+ + + +LV+MYAK G L A M+F+ + ++++SW
Sbjct: 511 SLSAFD--KGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSW 568
Query: 222 TALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIE- 280
T +I G GF +EA+ +F +MR AG+ +E++F +L AC+H+GLV+EG R+F ++
Sbjct: 569 TVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRH 628
Query: 281 DYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAE 340
+ +EP V HYA +V ++ ++G L +AY I+ M + P+ ++G+ L C+ H ++AE
Sbjct: 629 ECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAE 688
Query: 341 RVIEQVLRMVKPEDDRGIYRLIHDLYVMGEKWEEAAKL 378
+V E+V + +PE + G Y L+ ++Y EKWE+ +L
Sbjct: 689 KVAEKVFEL-EPE-NTGYYVLMANIYAEAEKWEQVKRL 724
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 108/360 (30%), Positives = 182/360 (50%), Gaps = 50/360 (13%)
Query: 3 LYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLLNA 62
L+ K+ +GV DS+ KS +S L S+ + LH I+K GF
Sbjct: 182 LFKKMMSSGVEMDSYTFSCVSKSFSS-LRSVHGGEQLHGFILKSGFGE------------ 228
Query: 63 YVLLSFLDACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMIS 122
RN+V N+++ Y ++ V AR+VF+E +RD +S +S+I+
Sbjct: 229 ------------------RNSVG-NSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIIN 269
Query: 123 AYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNG 182
Y + G +++GLS+F ++L+ GI+ D T +V +GCA + L G++VH VK
Sbjct: 270 GYVSNGLAEKGLSVFVQMLV-SGIEIDLATIVSVFAGCADSRLISL--GRAVHSIGVKAC 326
Query: 183 WELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFE 242
+ TL++MY+K G L +A VF M +R+V+S+T++I G A+ G EA+ +FE
Sbjct: 327 FSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFE 386
Query: 243 KMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSG 302
+M G+ P+ T T VL+ CA L++EG+R + I++ + + +L+ + K G
Sbjct: 387 EMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCG 446
Query: 303 RLEEAYEIIKTMKVEP----NVVVFG-----------SFLSACKEHKQFEMAERVIEQVL 347
++EA + M+V+ N ++ G S + E K+F ER + VL
Sbjct: 447 SMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVL 506
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 117/237 (49%), Gaps = 4/237 (1%)
Query: 93 YSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVT 152
Y+ GD++ A VF+E ++ + +++ G + LF++ ++ G++ D T
Sbjct: 139 YTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKK-MMSSGVEMDSYT 197
Query: 153 AGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFEL 212
V + + S+ G+ +HGFI+K+G+ +G +LV Y K + +A VF+
Sbjct: 198 FSCVSKSFSSLRSVH--GGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDE 255
Query: 213 MVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEG 272
M ER+V+SW ++I G G E+ L VF +M V+G+ + T V + CA + L+ G
Sbjct: 256 MTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLG 315
Query: 273 RRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSA 329
R + + +L+ + K G L+ A + + M + +VV + S ++
Sbjct: 316 RAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMS-DRSVVSYTSMIAG 371
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 85/181 (46%), Gaps = 3/181 (1%)
Query: 149 DQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAM 208
D T +VL CA SL GK V FI NG+ +++ LG+ L MY G L+ A+
Sbjct: 93 DPRTLCSVLQLCADSKSLK--DGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASR 150
Query: 209 VFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGL 268
VF+ + L W L+ A+ G ++ +F+KM +GV + TF+ V + +
Sbjct: 151 VFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRS 210
Query: 269 VEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLS 328
V G + I G + SLV K+ R++ A ++ M E +V+ + S ++
Sbjct: 211 VHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEM-TERDVISWNSIIN 269
Query: 329 A 329
Sbjct: 270 G 270
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 91/227 (40%), Gaps = 61/227 (26%)
Query: 15 DSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLLNAYVLL-SFLDACI 73
D + L +C S L + + +H +I++ G+ HVAN L++ Y + L A +
Sbjct: 498 DERTVACVLPACAS-LSAFDKGREIHGYIMRNGYFSDR-HVANSLVDMYAKCGALLLAHM 555
Query: 74 LFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQG 133
LFD++ +++ V+W MI GY G + A +F + Q
Sbjct: 556 LFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQ---------------------- 593
Query: 134 LSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGW---------- 183
GI+ D+++ ++L C+H G +V GW
Sbjct: 594 ----------AGIEADEISFVSLLYACSHSG-------------LVDEGWRFFNIMRHEC 630
Query: 184 --ELNAELGATLVNMYAKGGVLRNAAMVFELM-VERNVLSWTALICG 227
E E A +V+M A+ G L A E M + + W AL+CG
Sbjct: 631 KIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCG 677
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 205 bits (521), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 120/371 (32%), Positives = 205/371 (55%), Gaps = 11/371 (2%)
Query: 15 DSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLLNAYVLLSFLD-ACI 73
D F +K+C ++L S+ + +H H I +A + V + L++ Y L+ A
Sbjct: 104 DDFVFSALVKAC-ANLGSIDHGRQVHCHFIVSEYANDEV-VKSSLVDMYAKCGLLNSAKA 161
Query: 74 LFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQG 133
+FD + +NT++W M+ GY++SG + A E+F P ++ S +++IS + G +
Sbjct: 162 VFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEA 221
Query: 134 LSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATL 193
S+F + D + +++ CA++ + +AG+ VHG ++ G++ + L
Sbjct: 222 FSVFTEMRRERVDILDPLVLSSIVGACANLAAS--IAGRQVHGLVIALGFDSCVFISNAL 279
Query: 194 VNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNE 253
++MYAK + A +F M R+V+SWT+LI G AQ G E+AL +++ M GV+PNE
Sbjct: 280 IDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNE 339
Query: 254 LTFTGVLSACAHAGLVEEGRRYFK-MIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIK 312
+TF G++ AC+H G VE+GR F+ M +DYG+ P + HY L+ L+G+SG L+EA +I
Sbjct: 340 VTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIH 399
Query: 313 TMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPEDDRGIYRLIHDLYVMGEKW 372
TM P+ + + LSACK + +M R+ + ++ K +D Y L+ ++Y W
Sbjct: 400 TMPFPPDEPTWAALLSACKRQGRGQMGIRIADHLVSSFKLKDP-STYILLSNIYASASLW 458
Query: 373 ----EEAAKLG 379
E KLG
Sbjct: 459 GKVSEARRKLG 469
Score = 104 bits (260), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 94/356 (26%), Positives = 160/356 (44%), Gaps = 67/356 (18%)
Query: 32 SLTIIQHLHAHIIKLGFAPTHLHVANCLLNAYVLLSFLDACILFDEMPNRNTVTWNTMIV 91
+LT + LHAHI+KLG V C L NT++
Sbjct: 18 TLTTAKALHAHIVKLGI------VQCCPLA-------------------------NTLVN 46
Query: 92 GYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQV 151
Y + G A +VF+E P RD ++ +S+++A N S + LS+F V G++PD
Sbjct: 47 VYGKCGAASHALQVFDEMPHRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDF 106
Query: 152 TAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFE 211
A++ CA++GS+ G+ VH + + + + + ++LV+MYAK G+L +A VF+
Sbjct: 107 VFSALVKACANLGSID--HGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFD 164
Query: 212 LMVERNVLSWTALICGAAQWGFCEEAL-------------------------------VV 240
+ +N +SWTA++ G A+ G EEAL V
Sbjct: 165 SIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSV 224
Query: 241 FEKMRVAGVRP-NELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVG 299
F +MR V + L + ++ ACA+ GR+ ++ G + V +L+ +
Sbjct: 225 FTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYA 284
Query: 300 KSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRM-VKPED 354
K + A +I M+ +VV + S + +H Q E A + + ++ VKP +
Sbjct: 285 KCSDVIAAKDIFSRMR-HRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNE 339
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 205 bits (521), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 129/397 (32%), Positives = 222/397 (55%), Gaps = 18/397 (4%)
Query: 1 MHLYSKLHRT-GVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCL 59
++L+ ++H + +P D+ LKSC + + + +HAH +K F ++ V L
Sbjct: 32 LNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPV-LGGSVHAHSVKSNFL-SNPFVGCAL 89
Query: 60 LNAY-VLLSFLDACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAP-QRDSVSL 117
L+ Y LS A LFDE+P RN V WN MI Y+ G V+ A E++E + S
Sbjct: 90 LDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKEAVELYEAMDVMPNESSF 149
Query: 118 SSMISAYNNIGS---SKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSV 174
+++I +G+ S + + +R+++ F KP+ +T A++S C+ +G+ L+ K +
Sbjct: 150 NAIIKGL--VGTEDGSYRAIEFYRKMIEFR-FKPNLITLLALVSACSAIGAFRLI--KEI 204
Query: 175 HGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFC 234
H + +N E + +L + LV Y + G + +VF+ M +R+V++W++LI A G
Sbjct: 205 HSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWSSLISAYALHGDA 264
Query: 235 EEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIE-DYGMEPKVHHYAS 293
E AL F++M +A V P+++ F VL AC+HAGL +E YFK ++ DYG+ HY+
Sbjct: 265 ESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYFKRMQGDYGLRASKDHYSC 324
Query: 294 LVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPE 353
LV ++ + GR EEAY++I+ M +P +G+ L AC+ + + E+AE ++L MV+PE
Sbjct: 325 LVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGEIELAEIAARELL-MVEPE 383
Query: 354 DDRGIYRLIHDLYVMGEKWEEAAKLGPGFDFNRSGIR 390
+ Y L+ +Y+ + EEA +L SG++
Sbjct: 384 NPAN-YVLLGKIYMSVGRQEEAERL--RLKMKESGVK 417
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 119/278 (42%), Gaps = 45/278 (16%)
Query: 115 VSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSV 174
+SL+ +S+Y N G+ +Q L+LF ++ + D L CA + + G SV
Sbjct: 13 ISLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCA--AAFRPVLGGSV 70
Query: 175 HGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFC 234
H VK+ + N +G L++MY K + +A +F+ + +RN + W A+I G
Sbjct: 71 HAHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKV 130
Query: 235 EEALVVFEKMRVAG---------------------------------VRPNELTFTGVLS 261
+EA+ ++E M V +PN +T ++S
Sbjct: 131 KEAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVS 190
Query: 262 ACAHAGLVEEGRRYFKMIEDYG----MEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVE 317
AC+ G R K I Y +EP + LV G+ G + + +M+ +
Sbjct: 191 ACSAIGAF----RLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSME-D 245
Query: 318 PNVVVFGSFLSACKEHKQFEMAERVIEQV-LRMVKPED 354
+VV + S +SA H E A + +++ L V P+D
Sbjct: 246 RDVVAWSSLISAYALHGDAESALKTFQEMELAKVTPDD 283
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 204 bits (520), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 108/294 (36%), Positives = 190/294 (64%), Gaps = 7/294 (2%)
Query: 87 NTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGI 146
N+++ Y+ GDV A +VF++ P++D V+ +S+I+ + G ++ L+L+ + +GI
Sbjct: 27 NSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTE-MNSKGI 85
Query: 147 KPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNA 206
KPD T ++LS CA +G+L L GK VH +++K G N L+++YA+ G + A
Sbjct: 86 KPDGFTIVSLLSACAKIGALTL--GKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEA 143
Query: 207 AMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMR-VAGVRPNELTFTGVLSACAH 265
+F+ MV++N +SWT+LI G A GF +EA+ +F+ M G+ P E+TF G+L AC+H
Sbjct: 144 KTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSH 203
Query: 266 AGLVEEGRRYFK-MIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFG 324
G+V+EG YF+ M E+Y +EP++ H+ +V L+ ++G++++AYE IK+M ++PNVV++
Sbjct: 204 CGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWR 263
Query: 325 SFLSACKEHKQFEMAERVIEQVLRMVKPEDDRGIYRLIHDLYVMGEKWEEAAKL 378
+ L AC H ++AE Q+L++ +P + G Y L+ ++Y ++W + K+
Sbjct: 264 TLLGACTVHGDSDLAEFARIQILQL-EP-NHSGDYVLLSNMYASEQRWSDVQKI 315
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 90/157 (57%), Gaps = 1/157 (0%)
Query: 171 GKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQ 230
G+++H ++++G+ + +L+++YA G + +A VF+ M E+++++W ++I G A+
Sbjct: 7 GETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAE 66
Query: 231 WGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHH 290
G EEAL ++ +M G++P+ T +LSACA G + G+R + G+ +H
Sbjct: 67 NGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHS 126
Query: 291 YASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFL 327
L+ L + GR+EEA + M V+ N V + S +
Sbjct: 127 SNVLLDLYARCGRVEEAKTLFDEM-VDKNSVSWTSLI 162
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 120/264 (45%), Gaps = 62/264 (23%)
Query: 3 LYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLLNA 62
LY++++ G+ D F IV L +C + + +LT+ + +H ++IK+G +LH +N LL+
Sbjct: 76 LYTEMNSKGIKPDGFTIVSLLSAC-AKIGALTLGKRVHVYMIKVGLT-RNLHSSNVLLDL 133
Query: 63 YVLLSFLD-ACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMI 121
Y ++ A LFDEM ++N+V+W ++IVG
Sbjct: 134 YARCGRVEEAKTLFDEMVDKNSVSWTSLIVGL---------------------------- 165
Query: 122 SAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKN 181
A N G K+ + LF+ + EG+ P ++T +L C+H G +VK
Sbjct: 166 -AVNGFG--KEAIELFKYMESTEGLLPCEITFVGILYACSHCG-------------MVKE 209
Query: 182 GWEL------------NAELGATLVNMYAKGGVLRNAAMVFELM-VERNVLSWTALICGA 228
G+E E +V++ A+ G ++ A + M ++ NV+ W L+
Sbjct: 210 GFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGAC 269
Query: 229 AQWGFCEEALVVFEKMRVAGVRPN 252
G + L F ++++ + PN
Sbjct: 270 TVHG--DSDLAEFARIQILQLEPN 291
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 204 bits (519), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 120/372 (32%), Positives = 204/372 (54%), Gaps = 37/372 (9%)
Query: 3 LYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLLNA 62
L+ + TG+ D+ ++ +K+C ++ + + + +H I+ F ++ +++
Sbjct: 197 LFCLMRDTGLALDALTLICLVKAC-GNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDM 255
Query: 63 YVLLSFLDACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMIS 122
YV LD AR++FE + R+ V +++IS
Sbjct: 256 YVKCRLLD------------------------------NARKLFETSVDRNVVMWTTLIS 285
Query: 123 AYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNG 182
+ + + LFR+ +L E I P+Q T A+L C+ +GSL GKSVHG++++NG
Sbjct: 286 GFAKCERAVEAFDLFRQ-MLRESILPNQCTLAAILVSCSSLGSLR--HGKSVHGYMIRNG 342
Query: 183 WELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFE 242
E++A + ++MYA+ G ++ A VF++M ERNV+SW+++I G EEAL F
Sbjct: 343 IEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINAFGINGLFEEALDCFH 402
Query: 243 KMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFK-MIEDYGMEPKVHHYASLVYLVGKS 301
KM+ V PN +TF +LSAC+H+G V+EG + F+ M DYG+ P+ HYA +V L+G++
Sbjct: 403 KMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEHYACMVDLLGRA 462
Query: 302 GRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPEDDRGIYRL 361
G + EA I M V+P +G+ LSAC+ HK+ ++A + E++L M +PE +Y L
Sbjct: 463 GEIGEAKSFIDNMPVKPMASAWGALLSACRIHKEVDLAGEIAEKLLSM-EPEKS-SVYVL 520
Query: 362 IHDLYVMGEKWE 373
+ ++Y WE
Sbjct: 521 LSNIYADAGMWE 532
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 100/387 (25%), Positives = 164/387 (42%), Gaps = 89/387 (22%)
Query: 3 LYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQH---LHAHIIKLGFAPTHLHVANCL 59
LY+++ R DSF +VF +K+C L ++++ +H +K G +VA L
Sbjct: 96 LYNRMRRHCDGVDSFNLVFAIKACV----GLGLLENGILIHGLAMKNGLDKDD-YVAPSL 150
Query: 60 LNAYVLLSFLD-ACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLS 118
+ Y L ++ A +FDE+P RN+V W ++ GY + + + P+
Sbjct: 151 VEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLK----------YSKDPE------- 193
Query: 119 SMISAYNNIGSSKQGLSLFRRVLLFE--GIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHG 176
+FR L G+ D +T ++ C ++ GK VHG
Sbjct: 194 -----------------VFRLFCLMRDTGLALDALTLICLVKACGNV--FAGKVGKCVHG 234
Query: 177 FIVKNGW-ELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCE 235
++ + + + L A++++MY K +L NA +FE V+RNV+ WT LI G A+
Sbjct: 235 VSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAV 294
Query: 236 EALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGR---------------------- 273
EA +F +M + PN+ T +L +C+ G + G+
Sbjct: 295 EAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFI 354
Query: 274 ---------RYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMK---VEPNVV 321
+ + + D E V ++S++ G +G EEA + MK V PN V
Sbjct: 355 DMYARCGNIQMARTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSV 414
Query: 322 VFGSFLSACKEH-------KQFEMAER 341
F S LSAC KQFE R
Sbjct: 415 TFVSLLSACSHSGNVKEGWKQFESMTR 441
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 89/329 (27%), Positives = 144/329 (43%), Gaps = 60/329 (18%)
Query: 28 SHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLLNAYVLLSFLD-ACILFDEMP--NRNTV 84
S +L Q +HA +I GF + + + L NAY+ + LD A F+ +P RN
Sbjct: 15 SQAKTLNHTQQVHAKVIIHGF-EDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCWKRNRH 73
Query: 85 TWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFE 144
+WNT++ GYS+S + S ++ YN + G+ F V
Sbjct: 74 SWNTILSGYSKS----------------KTCCYSDVLLLYNRMRRHCDGVDSFNLVF--- 114
Query: 145 GIKPDQVTAGAVLSGCAHMGSLGLLA-GKSVHGFIVKNGWELNAELGATLVNMYAKGGVL 203
+ C LGLL G +HG +KNG + + + +LV MYA+ G +
Sbjct: 115 -----------AIKACV---GLGLLENGILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTM 160
Query: 204 RNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSAC 263
+A VF+ + RN + W L+ G ++ E +F MR G+ + LT ++ AC
Sbjct: 161 ESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKAC 220
Query: 264 AH--AGLVEEG------RRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMK 315
+ AG V + RR F DY AS++ + K L+ A ++ +T
Sbjct: 221 GNVFAGKVGKCVHGVSIRRSFIDQSDY-------LQASIIDMYVKCRLLDNARKLFET-S 272
Query: 316 VEPNVVVFGSFLSACKEHKQFEMAERVIE 344
V+ NVV++ + +S F ER +E
Sbjct: 273 VDRNVVMWTTLISG------FAKCERAVE 295
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 204 bits (518), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 113/325 (34%), Positives = 190/325 (58%), Gaps = 8/325 (2%)
Query: 57 NCLLNAYVLLSFLD-ACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAP-QRDS 114
N +++ Y+ L+ A F P R V W MI GY ++ V+ A +F++ ++
Sbjct: 190 NAMISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNL 249
Query: 115 VSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSV 174
V+ ++MIS Y + GL LFR +L EGI+P+ + L GC+ + +L L G+ +
Sbjct: 250 VTWNAMISGYVENSRPEDGLKLFR-AMLEEGIRPNSSGLSSALLGCSELSALQL--GRQI 306
Query: 175 HGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFC 234
H + K+ + +L++MY K G L +A +FE+M +++V++W A+I G AQ G
Sbjct: 307 HQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNA 366
Query: 235 EEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFK-MIEDYGMEPKVHHYAS 293
++AL +F +M +RP+ +TF VL AC HAGLV G YF+ M+ DY +EP+ HY
Sbjct: 367 DKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTC 426
Query: 294 LVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPE 353
+V L+G++G+LEEA ++I++M P+ VFG+ L AC+ HK E+AE E++L++
Sbjct: 427 MVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQL--NS 484
Query: 354 DDRGIYRLIHDLYVMGEKWEEAAKL 378
+ Y + ++Y +WE+ A++
Sbjct: 485 QNAAGYVQLANIYASKNRWEDVARV 509
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 135/271 (49%), Gaps = 11/271 (4%)
Query: 69 LDACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIG 128
++A LFDE+P +T ++N M+ Y R+ + ++A+ F+ P +D+ S ++MI+ Y G
Sbjct: 110 MEAHQLFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRG 169
Query: 129 SSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAE 188
++ LF + ++ ++V+ A++SG G L K+ H F V + A
Sbjct: 170 EMEKARELF-----YSMMEKNEVSWNAMISGYIECGDL----EKASHFFKVAPVRGVVAW 220
Query: 189 LGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAG 248
M AK L AM ++ V +N+++W A+I G + E+ L +F M G
Sbjct: 221 TAMITGYMKAKKVELAE-AMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEG 279
Query: 249 VRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAY 308
+RPN + L C+ ++ GR+ +++ + V SL+ + K G L +A+
Sbjct: 280 IRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAW 339
Query: 309 EIIKTMKVEPNVVVFGSFLSACKEHKQFEMA 339
++ + MK + +VV + + +S +H + A
Sbjct: 340 KLFEVMK-KKDVVAWNAMISGYAQHGNADKA 369
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 203 bits (517), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 125/369 (33%), Positives = 208/369 (56%), Gaps = 16/369 (4%)
Query: 19 IVFTLKSCTSHLHSLTIIQHLHAH--IIKLGFAPTHLHVANCLLNAYVLLSF-----LDA 71
+VFT + +LH+ I L ++K+ +P + + + L +LL+ L
Sbjct: 407 VVFT-AMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHG 465
Query: 72 CILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSK 131
I+ NR + +I Y++ G + A E+FE +RD VS +SMI+ +
Sbjct: 466 FIIKKGFDNRCNIGC-AVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPS 524
Query: 132 QGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGA 191
+ +FR++ + GI D V+ A LS CA++ S GK++HGF++K+ + +
Sbjct: 525 AAIDIFRQMGV-SGICYDCVSISAALSACANLPSESF--GKAIHGFMIKHSLASDVYSES 581
Query: 192 TLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKM-RVAGVR 250
TL++MYAK G L+ A VF+ M E+N++SW ++I G +++L +F +M +G+R
Sbjct: 582 TLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIR 641
Query: 251 PNELTFTGVLSACAHAGLVEEGRRYFK-MIEDYGMEPKVHHYASLVYLVGKSGRLEEAYE 309
P+++TF ++S+C H G V+EG R+F+ M EDYG++P+ HYA +V L G++GRL EAYE
Sbjct: 642 PDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYE 701
Query: 310 IIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPEDDRGIYRLIHDLYVMG 369
+K+M P+ V+G+ L AC+ HK E+AE V L + P + G Y LI + +
Sbjct: 702 TVKSMPFPPDAGVWGTLLGACRLHKNVELAE-VASSKLMDLDPSNS-GYYVLISNAHANA 759
Query: 370 EKWEEAAKL 378
+WE K+
Sbjct: 760 REWESVTKV 768
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 135/251 (53%), Gaps = 4/251 (1%)
Query: 87 NTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGI 146
+ +I Y + V A+ +F + D V ++MIS Y + G L +FR ++ + I
Sbjct: 379 SALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVK-I 437
Query: 147 KPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNA 206
P+++T ++L + L L G+ +HGFI+K G++ +G +++MYAK G + A
Sbjct: 438 SPNEITLVSILPVIGIL--LALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLA 495
Query: 207 AMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHA 266
+FE + +R+++SW ++I AQ A+ +F +M V+G+ + ++ + LSACA+
Sbjct: 496 YEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANL 555
Query: 267 GLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSF 326
G+ + + + V+ ++L+ + K G L+ A + KTMK E N+V + S
Sbjct: 556 PSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMK-EKNIVSWNSI 614
Query: 327 LSACKEHKQFE 337
++AC H + +
Sbjct: 615 IAACGNHGKLK 625
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 129/285 (45%), Gaps = 41/285 (14%)
Query: 1 MHLYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLL 60
+ Y K+ GV D +K+C + L + I L + LG VA+ L+
Sbjct: 123 LAFYFKMLCFGVSPDVSTFPCLVKACVA-LKNFKGIDFLSDTVSSLGMDCNEF-VASSLI 180
Query: 61 NAYVLLSFLDA-CILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSS 119
AY+ +D LFD + ++ V WN M+ GY++ G +L S
Sbjct: 181 KAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCG------------------ALDS 222
Query: 120 MISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIV 179
+I +G S+ R + I P+ VT VLS CA L + G +HG +V
Sbjct: 223 VI----------KGFSVMR----MDQISPNAVTFDCVLSVCA--SKLLIDLGVQLHGLVV 266
Query: 180 KNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALV 239
+G + + +L++MY+K G +A+ +F +M + ++W +I G Q G EE+L
Sbjct: 267 VSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLT 326
Query: 240 VFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGM 284
F +M +GV P+ +TF+ +L + + E Y K I Y M
Sbjct: 327 FFYEMISSGVLPDAITFSSLLPSVSKF----ENLEYCKQIHCYIM 367
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 124/260 (47%), Gaps = 4/260 (1%)
Query: 87 NTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGI 146
N+++ YS+ G A ++F + D+V+ + MIS Y G ++ L+ F ++ G+
Sbjct: 278 NSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYE-MISSGV 336
Query: 147 KPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNA 206
PD +T ++L + +L K +H +I+++ L+ L + L++ Y K + A
Sbjct: 337 LPDAITFSSLLPSVSKFENLEYC--KQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMA 394
Query: 207 AMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHA 266
+F +V+ +TA+I G G ++L +F + + PNE+T +L
Sbjct: 395 QNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGIL 454
Query: 267 GLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSF 326
++ GR I G + + + +++ + K GR+ AYEI + + + ++V + S
Sbjct: 455 LALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLS-KRDIVSWNSM 513
Query: 327 LSACKEHKQFEMAERVIEQV 346
++ C + A + Q+
Sbjct: 514 ITRCAQSDNPSAAIDIFRQM 533
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 100/197 (50%), Gaps = 3/197 (1%)
Query: 118 SSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGF 177
+S+IS++ G Q L+ + ++L F G+ PD T ++ C + + + +
Sbjct: 107 NSIISSFVRNGLLNQALAFYFKMLCF-GVSPDVSTFPCLVKACVALKNFKGI--DFLSDT 163
Query: 178 IVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEA 237
+ G + N + ++L+ Y + G + + +F+ +++++ + W ++ G A+ G +
Sbjct: 164 VSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSV 223
Query: 238 LVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYL 297
+ F MR+ + PN +TF VLS CA L++ G + ++ G++ + SL+ +
Sbjct: 224 IKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSM 283
Query: 298 VGKSGRLEEAYEIIKTM 314
K GR ++A ++ + M
Sbjct: 284 YSKCGRFDDASKLFRMM 300
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 203 bits (517), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 106/297 (35%), Positives = 178/297 (59%), Gaps = 10/297 (3%)
Query: 80 NRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRR 139
+ N T+I Y+ DV AR VF+ + V ++MI+ Y + LSLFR
Sbjct: 161 DDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFRE 220
Query: 140 VLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAK 199
+ + +KP+++T +VLS CA +GSL L GK +H + K+ + ++ L++M+AK
Sbjct: 221 -MQGKYLKPNEITLLSVLSSCALLGSLDL--GKWIHKYAKKHSFCKYVKVNTALIDMFAK 277
Query: 200 GGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGV 259
G L +A +FE M ++ +W+A+I A G E+++++FE+MR V+P+E+TF G+
Sbjct: 278 CGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGL 337
Query: 260 LSACAHAGLVEEGRRYF-KMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEP 318
L+AC+H G VEEGR+YF +M+ +G+ P + HY S+V L+ ++G LE+AYE I + + P
Sbjct: 338 LNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISP 397
Query: 319 NVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPEDDR--GIYRLIHDLYVMGEKWE 373
+++ L+AC H ++AE+V E++ + DD G Y ++ +LY +KWE
Sbjct: 398 TPMLWRILLAACSSHNNLDLAEKVSERIFEL----DDSHGGDYVILSNLYARNKKWE 450
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 131/254 (51%), Gaps = 5/254 (1%)
Query: 102 AREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCA 161
AR +FE + D V +SM Y+ + + SLF +L +GI PD T ++L CA
Sbjct: 82 ARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILE-DGILPDNYTFPSLLKACA 140
Query: 162 HMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSW 221
+L G+ +H +K G + N + TL+NMY + + +A VF+ +VE V+ +
Sbjct: 141 VAKALE--EGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCY 198
Query: 222 TALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIED 281
A+I G A+ EAL +F +M+ ++PNE+T VLS+CA G ++ G+ K +
Sbjct: 199 NAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKK 258
Query: 282 YGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAER 341
+ V +L+ + K G L++A I + M+ + + + + + A H + E +
Sbjct: 259 HSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYK-DTQAWSAMIVAYANHGKAEKSML 317
Query: 342 VIEQVL-RMVKPED 354
+ E++ V+P++
Sbjct: 318 MFERMRSENVQPDE 331
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 76/149 (51%), Gaps = 7/149 (4%)
Query: 23 LKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLLNAYVLL-SFLDACILFDEMPNR 81
L SC + L SL + + +H + K F ++ V L++ + S DA +F++M +
Sbjct: 237 LSSC-ALLGSLDLGKWIHKYAKKHSFC-KYVKVNTALIDMFAKCGSLDDAVSIFEKMRYK 294
Query: 82 NTVTWNTMIVGYSRSGDVQRAREVFE----EAPQRDSVSLSSMISAYNNIGSSKQGLSLF 137
+T W+ MIV Y+ G +++ +FE E Q D ++ +++A ++ G ++G F
Sbjct: 295 DTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYF 354
Query: 138 RRVLLFEGIKPDQVTAGAVLSGCAHMGSL 166
+++ GI P G+++ + G+L
Sbjct: 355 SQMVSKFGIVPSIKHYGSMVDLLSRAGNL 383
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 202 bits (514), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 119/378 (31%), Positives = 213/378 (56%), Gaps = 13/378 (3%)
Query: 3 LYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLLNA 62
++ K+H G D + L S L + + +H ++IK G V + +++
Sbjct: 239 MFQKIHHLGFCPDQVTVSSVLPS-VGDSEMLNMGRLIHGYVIKQGLLKDKC-VISAMIDM 296
Query: 63 YVLLSFLDACI-LFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFE----EAPQRDSVSL 117
Y + I LF++ N I G SR+G V +A E+FE + + + VS
Sbjct: 297 YGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSW 356
Query: 118 SSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGF 177
+S+I+ G + L LFR + + G+KP+ VT ++L C ++ +LG G+S HGF
Sbjct: 357 TSIIAGCAQNGKDIEALELFREMQV-AGVKPNHVTIPSMLPACGNIAALG--HGRSTHGF 413
Query: 178 IVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEA 237
V+ N +G+ L++MYAK G + + +VF +M +N++ W +L+ G + G +E
Sbjct: 414 AVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEV 473
Query: 238 LVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMI-EDYGMEPKVHHYASLVY 296
+ +FE + ++P+ ++FT +LSAC GL +EG +YFKM+ E+YG++P++ HY+ +V
Sbjct: 474 MSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVN 533
Query: 297 LVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPEDDR 356
L+G++G+L+EAY++IK M EP+ V+G+ L++C+ ++AE E++ + +PE+
Sbjct: 534 LLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHL-EPENP- 591
Query: 357 GIYRLIHDLYVMGEKWEE 374
G Y L+ ++Y W E
Sbjct: 592 GTYVLLSNIYAAKGMWTE 609
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 155/324 (47%), Gaps = 44/324 (13%)
Query: 70 DACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAP----QRDSVSLSSMISAYN 125
DA +FD M +++ VT + ++ Y+R G ++ + E + + VS + ++S +N
Sbjct: 169 DARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFN 228
Query: 126 NIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWEL 185
G K+ + +F+++ G PDQVT +VL L + G+ +HG+++K G
Sbjct: 229 RSGYHKEAVVMFQKIHHL-GFCPDQVTVSSVLPSVGDSEMLNM--GRLIHGYVIKQGLLK 285
Query: 186 NAELGATLVNMYAK-------------------------------GGVLRNAAMVFELMV 214
+ + + +++MY K G++ A +FEL
Sbjct: 286 DKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFK 345
Query: 215 ER----NVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVE 270
E+ NV+SWT++I G AQ G EAL +F +M+VAGV+PN +T +L AC + +
Sbjct: 346 EQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALG 405
Query: 271 EGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSAC 330
GR + VH ++L+ + K GR+ + +I+ M N+V + S ++
Sbjct: 406 HGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLS-QIVFNMMPTKNLVCWNSLMNGF 464
Query: 331 KEHKQFEMAERVIEQVLRM-VKPE 353
H + + + E ++R +KP+
Sbjct: 465 SMHGKAKEVMSIFESLMRTRLKPD 488
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 107/227 (47%), Gaps = 8/227 (3%)
Query: 89 MIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKP 148
+I YS A V + P S SS+I A Q + +F R + G+ P
Sbjct: 56 LIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSR-MFSHGLIP 114
Query: 149 DQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAM 208
D + CA + + + GK +H +G +++A + ++ +MY + G + +A
Sbjct: 115 DSHVLPNLFKVCAELSAFKV--GKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARK 172
Query: 209 VFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGL 268
VF+ M +++V++ +AL+C A+ G EE + + +M +G+ N +++ G+LS +G
Sbjct: 173 VFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGY 232
Query: 269 VEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKS-----GRLEEAYEI 310
+E F+ I G P +S++ VG S GRL Y I
Sbjct: 233 HKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVI 279
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 201 bits (512), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 125/376 (33%), Positives = 208/376 (55%), Gaps = 37/376 (9%)
Query: 3 LYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLLNA 62
Y+++ + G D+F LK+CT L S+ + +H + KLG L A
Sbjct: 119 FYNEMMQRGNEPDNFTYPCLLKACT-RLKSIREGKQIHGQVFKLG------------LEA 165
Query: 63 YVLLSFLDACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMIS 122
V + N++I Y R G+++ + VFE+ + + S SSM+S
Sbjct: 166 DVFVQ-------------------NSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVS 206
Query: 123 AYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNG 182
A +G + L LFR + +K ++ + L CA+ G+L L G S+HGF+++N
Sbjct: 207 ARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNL--GMSIHGFLLRNI 264
Query: 183 WELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFE 242
ELN + +LV+MY K G L A +F+ M +RN L+++A+I G A G E AL +F
Sbjct: 265 SELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFS 324
Query: 243 KMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYF-KMIEDYGMEPKVHHYASLVYLVGKS 301
KM G+ P+ + + VL+AC+H+GLV+EGRR F +M+++ +EP HY LV L+G++
Sbjct: 325 KMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRA 384
Query: 302 GRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPEDDRGIYRL 361
G LEEA E I+++ +E N V++ +FLS C+ + E+ + +++L++ + G Y L
Sbjct: 385 GLLEEALETIQSIPIEKNDVIWRTFLSQCRVRQNIELGQIAAQELLKL--SSHNPGDYLL 442
Query: 362 IHDLYVMGEKWEEAAK 377
I +LY G+ W++ A+
Sbjct: 443 ISNLYSQGQMWDDVAR 458
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 115/248 (46%), Gaps = 5/248 (2%)
Query: 102 AREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCA 161
A +F + ++MI Y N+ S ++ L + ++ G +PD T +L C
Sbjct: 85 AASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNE-MMQRGNEPDNFTYPCLLKACT 143
Query: 162 HMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSW 221
+ S+ GK +HG + K G E + + +L+NMY + G + ++ VFE + + SW
Sbjct: 144 RLKSIR--EGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASW 201
Query: 222 TALICGAAQWGFCEEALVVFEKM-RVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIE 280
++++ A G E L++F M ++ E L ACA+ G + G +
Sbjct: 202 SSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLL 261
Query: 281 DYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAE 340
E + SLV + K G L++A I + M+ + N + + + +S H + E A
Sbjct: 262 RNISELNIIVQTSLVDMYVKCGCLDKALHIFQKME-KRNNLTYSAMISGLALHGEGESAL 320
Query: 341 RVIEQVLR 348
R+ ++++
Sbjct: 321 RMFSKMIK 328
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 201 bits (512), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 129/376 (34%), Positives = 199/376 (52%), Gaps = 39/376 (10%)
Query: 1 MHLYSKLHRTGVPFDSFCIVF-TLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCL 59
+H + ++ G FD F T+ S ++L SL + + LH + L A + LHV N L
Sbjct: 336 LHFFREMQCMG--FDRRNFPFATMLSIAANLSSLQMGRQLHCQAL-LATADSILHVGNSL 392
Query: 60 LNAYVLLSFLDACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSS 119
++ Y C +F+E A +F+ PQR +VS ++
Sbjct: 393 VDMYA------KCEMFEE------------------------AELIFKSLPQRTTVSWTA 422
Query: 120 MISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIV 179
+IS Y G GL LF + + ++ DQ T VL A SL L GK +H FI+
Sbjct: 423 LISGYVQKGLHGAGLKLFTK-MRGSNLRADQSTFATVLKASASFASL--LLGKQLHAFII 479
Query: 180 KNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALV 239
++G N G+ LV+MYAK G +++A VFE M +RN +SW ALI A G E A+
Sbjct: 480 RSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIG 539
Query: 240 VFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFK-MIEDYGMEPKVHHYASLVYLV 298
F KM +G++P+ ++ GVL+AC+H G VE+G YF+ M YG+ PK HYA ++ L+
Sbjct: 540 AFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLL 599
Query: 299 GKSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPEDDRGI 358
G++GR EA +++ M EP+ +++ S L+AC+ HK +AER E++ M K D
Sbjct: 600 GRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLR-DAAA 658
Query: 359 YRLIHDLYVMGEKWEE 374
Y + ++Y +WE+
Sbjct: 659 YVSMSNIYAAAGEWEK 674
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/230 (32%), Positives = 124/230 (53%), Gaps = 7/230 (3%)
Query: 37 QHLHAHIIKLGFAPTHLHVANCLLNAYVLLSFLDAC-ILFDEMPNRNTVTWNTMIVGYSR 95
+ + A IIK GF T +N ++ + + A ++DEMP++NTV+ NTMI G+ +
Sbjct: 33 RRVDARIIKTGF-DTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVK 91
Query: 96 SGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIK-PDQVTAG 154
+GDV AR++F+ P R V+ + ++ Y + LFR++ PD VT
Sbjct: 92 TGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFT 151
Query: 155 AVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGAT--LVNMYAKGGVLRNAAMVFEL 212
+L GC ++ A VH F VK G++ N L + L+ Y + L A ++FE
Sbjct: 152 TLLPGCN--DAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEE 209
Query: 213 MVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSA 262
+ E++ +++ LI G + G E++ +F KMR +G +P++ TF+GVL A
Sbjct: 210 IPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKA 259
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/339 (25%), Positives = 150/339 (44%), Gaps = 36/339 (10%)
Query: 1 MHLYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLL 60
+HL+ K+ ++G F LK+ LH + Q LHA + GF+
Sbjct: 235 IHLFLKMRQSGHQPSDFTFSGVLKAVVG-LHDFALGQQLHALSVTTGFS----------- 282
Query: 61 NAYVLLSFLDACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSM 120
R+ N ++ YS+ V R +F+E P+ D VS + +
Sbjct: 283 --------------------RDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVV 322
Query: 121 ISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVK 180
IS+Y+ + L FR + G +LS A++ SL + G+ +H +
Sbjct: 323 ISSYSQADQYEASLHFFREMQCM-GFDRRNFPFATMLSIAANLSSLQM--GRQLHCQALL 379
Query: 181 NGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVV 240
+ +G +LV+MYAK + A ++F+ + +R +SWTALI G Q G L +
Sbjct: 380 ATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKL 439
Query: 241 FEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGK 300
F KMR + +R ++ TF VL A A + G++ I G V + LV + K
Sbjct: 440 FTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAK 499
Query: 301 SGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMA 339
G +++A ++ + M + N V + + +SA ++ E A
Sbjct: 500 CGSIKDAVQVFEEMP-DRNAVSWNALISAHADNGDGEAA 537
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 122/287 (42%), Gaps = 36/287 (12%)
Query: 36 IQHLHAHIIKLGFAPT-HLHVANCLLNAYVLLSFLD-ACILFDEMPNRNTVTWNTMIVGY 93
+ +HA +KLGF L V+N LL +Y + LD AC+LF
Sbjct: 166 VGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLF------------------ 207
Query: 94 SRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTA 153
EE P++DSV+ +++I+ Y G + + LF + + G +P T
Sbjct: 208 -------------EEIPEKDSVTFNTLITGYEKDGLYTESIHLFLK-MRQSGHQPSDFTF 253
Query: 154 GAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELM 213
VL + L G+ +H V G+ +A +G +++ Y+K + M+F+ M
Sbjct: 254 SGVLKAVVGLHDFAL--GQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEM 311
Query: 214 VERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGR 273
E + +S+ +I +Q E +L F +M+ G F +LS A+ ++ GR
Sbjct: 312 PELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGR 371
Query: 274 RYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNV 320
+ + +H SLV + K EEA I K++ V
Sbjct: 372 QLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTV 418
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 201 bits (511), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 108/311 (34%), Positives = 189/311 (60%), Gaps = 7/311 (2%)
Query: 70 DACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGS 129
DA LF+ MP + + N MI G + G++ +AR VF+ +R+ S ++I + G
Sbjct: 252 DAEELFEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGF 311
Query: 130 SKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAEL 189
+ L LF ++ +G++P T ++LS CA + SL GK VH +V+ ++++ +
Sbjct: 312 ELEALDLFI-LMQKQGVRPTFPTLISILSVCASLASLH--HGKQVHAQLVRCQFDVDVYV 368
Query: 190 GATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAG- 248
+ L+ MY K G L + ++F+ ++++ W ++I G A G EEAL VF +M ++G
Sbjct: 369 ASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGS 428
Query: 249 VRPNELTFTGVLSACAHAGLVEEGRRYFKMIED-YGMEPKVHHYASLVYLVGKSGRLEEA 307
+PNE+TF LSAC++AG+VEEG + ++ +E +G++P HYA +V ++G++GR EA
Sbjct: 429 TKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEA 488
Query: 308 YEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPEDDRGIYRLIHDLYV 367
E+I +M VEP+ V+GS L AC+ H Q ++AE ++++ ++PE+ G Y L+ ++Y
Sbjct: 489 MEMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIE-IEPENS-GTYILLSNMYA 546
Query: 368 MGEKWEEAAKL 378
+W + A+L
Sbjct: 547 SQGRWADVAEL 557
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 138/303 (45%), Gaps = 33/303 (10%)
Query: 70 DACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGS 129
DA LFDEMP+RN ++WN ++ GY ++G++ AR+VF+ P+R+ VS ++++ Y + G
Sbjct: 66 DARKLFDEMPDRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGK 125
Query: 130 SKQGLSLFRRV--------------LLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVH 175
SLF ++ L +G D ++ ++ ++ G
Sbjct: 126 VDVAESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKE 185
Query: 176 GFIVKNGWELNAELG-------ATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGA 228
G V E+ E+ T+V Y + + +A +F++M E+ +SWT+++ G
Sbjct: 186 GR-VDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGY 244
Query: 229 AQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKV 288
Q G E+A +FE M V V + ++S G + + RR F D E
Sbjct: 245 VQNGRIEDAEELFEVMPVKPV----IACNAMISGLGQKGEIAKARRVF----DSMKERND 296
Query: 289 HHYASLVYLVGKSGRLEEAYEIIKTMK---VEPNVVVFGSFLSACKEHKQFEMAERVIEQ 345
+ +++ + ++G EA ++ M+ V P S LS C ++V Q
Sbjct: 297 ASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQ 356
Query: 346 VLR 348
++R
Sbjct: 357 LVR 359
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 126/275 (45%), Gaps = 16/275 (5%)
Query: 70 DACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGS 129
DAC L++ +P+++ + +MI G + G V ARE+F+E +R ++ ++M++ Y
Sbjct: 159 DACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNR 218
Query: 130 SKQGLSLFRRVLLFEGIKPD--QVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNA 187
+F + P+ +V+ ++L G G + A + VK NA
Sbjct: 219 VDDARKIF-------DVMPEKTEVSWTSMLMGYVQNGRIE-DAEELFEVMPVKPVIACNA 270
Query: 188 ELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVA 247
+++ + G + A VF+ M ERN SW +I + GF EAL +F M+
Sbjct: 271 -----MISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQ 325
Query: 248 GVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEA 307
GVRP T +LS CA + G++ + + V+ + L+ + K G L ++
Sbjct: 326 GVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKS 385
Query: 308 YEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERV 342
I + +++++ S +S H E A +V
Sbjct: 386 KLIFDRFPSK-DIIMWNSIISGYASHGLGEEALKV 419
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/278 (21%), Positives = 138/278 (49%), Gaps = 30/278 (10%)
Query: 74 LFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQG 133
LFD +++ +WN+M+ GY + + AR++F+E P R+ +S + ++S Y G +
Sbjct: 39 LFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRNIISWNGLVSGYMKNGEIDEA 98
Query: 134 LSLFRRVLLFEGIKPDQ--VTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGA 191
+F + P++ V+ A++ G H G + + +S+ W++ +
Sbjct: 99 RKVF-------DLMPERNVVSWTALVKGYVHNGKVDV--AESLF-------WKMPEKNKV 142
Query: 192 TLVNM---YAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAG 248
+ M + + G + +A ++E++ +++ ++ T++I G + G +EA +F++M
Sbjct: 143 SWTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSERS 202
Query: 249 VRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAY 308
V +T+T +++ V++ R+ F D E + S++ ++GR+E+A
Sbjct: 203 V----ITWTTMVTGYGQNNRVDDARKIF----DVMPEKTEVSWTSMLMGYVQNGRIEDAE 254
Query: 309 EIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQV 346
E+ + M V+P V+ + +S + + A RV + +
Sbjct: 255 ELFEVMPVKP-VIACNAMISGLGQKGEIAKARRVFDSM 291
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 201 bits (510), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 120/333 (36%), Positives = 195/333 (58%), Gaps = 9/333 (2%)
Query: 57 NCLLNAYVLLSFL-DACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSV 115
N +++ YV +S + DA LF EMPNR+ +WN M+ GY+ G+V+ AR FE+ P++ +V
Sbjct: 316 NTMIDGYVHVSRMEDAFALFSEMPNRDAHSWNMMVSGYASVGNVELARHYFEKTPEKHTV 375
Query: 116 SLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVH 175
S +S+I+AY K+ + LF R+ + EG KPD T ++LS A G + L G +H
Sbjct: 376 SWNSIIAAYEKNKDYKEAVDLFIRMNI-EGEKPDPHTLTSLLS--ASTGLVNLRLGMQMH 432
Query: 176 GFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVF-ELMVERNVLSWTALICGAAQWGFC 234
+VK + + L+ MY++ G + + +F E+ ++R V++W A+I G A G
Sbjct: 433 QIVVKTVIP-DVPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHGNA 491
Query: 235 EEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYF-KMIEDYGMEPKVHHYAS 293
EAL +F M+ G+ P+ +TF VL+ACAHAGLV+E + F M+ Y +EP++ HY+S
Sbjct: 492 SEALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVYKIEPQMEHYSS 551
Query: 294 LVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPE 353
LV + G+ EEA II +M EP+ V+G+ L AC+ + +A E + R+ +PE
Sbjct: 552 LVNVTSGQGQFEEAMYIITSMPFEPDKTVWGALLDACRIYNNVGLAHVAAEAMSRL-EPE 610
Query: 354 DDRGIYRLIHDLYVMGEKWEEAAKLGPGFDFNR 386
Y L++++Y W+EA+++ + R
Sbjct: 611 SSTP-YVLLYNMYADMGLWDEASQVRMNMESKR 642
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 124/274 (45%), Gaps = 69/274 (25%)
Query: 46 LGFAPTHLHVANCLLNAYVLLSFLDACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREV 105
LGF T+ + + + Y+ +A +F+++ RNTVTWNTMI GY + ++ +AR++
Sbjct: 38 LGFRATNKELNQMIRSGYIA----EARDIFEKLEARNTVTWNTMISGYVKRREMNQARKL 93
Query: 106 FEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFR--RVLLFEGIKPDQVTAGAVLSGCAHM 163
F+ P+RD V+ ++MIS Y + G G+ R L E D + ++SG
Sbjct: 94 FDVMPKRDVVTWNTMISGYVSCG----GIRFLEEARKLFDEMPSRDSFSWNTMISG---- 145
Query: 164 GSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTA 223
YAK + A ++FE M ERN +SW+A
Sbjct: 146 ---------------------------------YAKNRRIGEALLLFEKMPERNAVSWSA 172
Query: 224 LICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAH-AGLVEEGR--------- 273
+I G Q G + A+V+F KM V P CA AGL++ R
Sbjct: 173 MITGFCQNGEVDSAVVLFRKMPVKDSSP----------LCALVAGLIKNERLSEAAWVLG 222
Query: 274 RYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEA 307
+Y ++ G E V+ Y +L+ G+ G++E A
Sbjct: 223 QYGSLVS--GREDLVYAYNTLIVGYGQRGQVEAA 254
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 88/349 (25%), Positives = 159/349 (45%), Gaps = 64/349 (18%)
Query: 57 NCLLNAYVL---LSFLD-ACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQR 112
N +++ YV + FL+ A LFDEMP+R++ +WNTMI GY+++ + A +FE+ P+R
Sbjct: 106 NTMISGYVSCGGIRFLEEARKLFDEMPSRDSFSWNTMISGYAKNRRIGEALLLFEKMPER 165
Query: 113 DSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAV----LSGCAH-MGSLG 167
++VS S+MI+ + G + LFR++ + + + AG + LS A +G G
Sbjct: 166 NAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNERLSEAAWVLGQYG 225
Query: 168 -LLAGK-----SVHGFIVKNGWELNAELG------------------------------A 191
L++G+ + + IV G E
Sbjct: 226 SLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWN 285
Query: 192 TLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRP 251
+++ Y K G + +A ++F+ M +R+ +SW +I G E+A +F +M P
Sbjct: 286 SMIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEM------P 339
Query: 252 NEL--TFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVH--HYASLVYLVGKSGRLEEA 307
N ++ ++S A G VE R YF+ P+ H + S++ K+ +EA
Sbjct: 340 NRDAHSWNMMVSGYASVGNVELARHYFEKT------PEKHTVSWNSIIAAYEKNKDYKEA 393
Query: 308 YEIIKTMKVE---PNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPE 353
++ M +E P+ S LSA + ++ + V++ V P+
Sbjct: 394 VDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKTVIPD 442
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 201 bits (510), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 105/300 (35%), Positives = 180/300 (60%), Gaps = 8/300 (2%)
Query: 82 NTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVL 141
+T N ++ Y++ + A+ VFE ++D V+ +S+IS ++ GS + L LF R +
Sbjct: 376 DTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHR-M 434
Query: 142 LFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGW--ELNAELGATLVNMYAK 199
E + P+ VT ++ S CA +GSL + G S+H + VK G+ + +G L++ YAK
Sbjct: 435 NSESVTPNGVTVASLFSACASLGSLAV--GSSLHAYSVKLGFLASSSVHVGTALLDFYAK 492
Query: 200 GGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGV 259
G ++A ++F+ + E+N ++W+A+I G + G +L +FE+M +PNE TFT +
Sbjct: 493 CGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSI 552
Query: 260 LSACAHAGLVEEGRRYF-KMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEP 318
LSAC H G+V EG++YF M +DY P HY +V ++ ++G LE+A +II+ M ++P
Sbjct: 553 LSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQP 612
Query: 319 NVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPEDDRGIYRLIHDLYVMGEKWEEAAKL 378
+V FG+FL C H +F++ E VI+++L + DD Y L+ +LY +W +A ++
Sbjct: 613 DVRCFGAFLHGCGMHSRFDLGEIVIKKMLDL--HPDDASYYVLVSNLYASDGRWNQAKEV 670
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/332 (26%), Positives = 154/332 (46%), Gaps = 48/332 (14%)
Query: 3 LYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLLNA 62
LY L + G +D LK+CT L L + +H ++K+
Sbjct: 129 LYDLLMKHGFRYDDIVFSKALKACT-ELQDLDNGKKIHCQLVKV---------------- 171
Query: 63 YVLLSFLDACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMIS 122
P+ + V ++ Y++ G+++ A +VF + R+ V +SMI+
Sbjct: 172 ----------------PSFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIA 215
Query: 123 AYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNG 182
Y ++GL LF R + + ++ T G ++ C + +L GK HG +VK+G
Sbjct: 216 GYVKNDLCEEGLVLFNR-MRENNVLGNEYTYGTLIMACTKLSALH--QGKWFHGCLVKSG 272
Query: 183 WELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFE 242
EL++ L +L++MY K G + NA VF +++ WTA+I G G EAL +F+
Sbjct: 273 IELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQ 332
Query: 243 KMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYAS-----LVYL 297
KM+ ++PN +T VLS C +E GR +G+ KV + + LV++
Sbjct: 333 KMKGVEIKPNCVTIASVLSGCGLIENLELGRSV------HGLSIKVGIWDTNVANALVHM 386
Query: 298 VGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSA 329
K + +A + + M+ E ++V + S +S
Sbjct: 387 YAKCYQNRDAKYVFE-MESEKDIVAWNSIISG 417
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 123/284 (43%), Gaps = 38/284 (13%)
Query: 93 YSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVT 152
Y G + AR VF++ P+ D M+ Y S + + L+ +L+ G + D +
Sbjct: 86 YGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYD-LLMKHGFRYDDIV 144
Query: 153 AGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFEL 212
L C + L GK +H +VK N L L++MYAK G +++A VF
Sbjct: 145 FSKALKACTELQDLD--NGKKIHCQLVKVPSFDNVVLTG-LLDMYAKCGEIKSAHKVFND 201
Query: 213 MVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEG 272
+ RNV+ WT++I G + CEE LV+F +MR V NE T+ ++ AC + +G
Sbjct: 202 ITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQG 261
Query: 273 RRYFKMIEDYGMEPKV-------------------------HHYASLVY----LVGKS-- 301
+ + + G+E H + LV +VG +
Sbjct: 262 KWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHN 321
Query: 302 GRLEEAYEIIKTMK---VEPNVVVFGSFLSACKEHKQFEMAERV 342
G + EA + + MK ++PN V S LS C + E+ V
Sbjct: 322 GSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSV 365
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 125/319 (39%), Gaps = 75/319 (23%)
Query: 1 MHLYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGF-APTHLHVANCL 59
+ L+ +++ V + + +C S L SL + LHA+ +KLGF A + +HV L
Sbjct: 428 LFLFHRMNSESVTPNGVTVASLFSACAS-LGSLAVGSSLHAYSVKLGFLASSSVHVGTAL 486
Query: 60 LNAYVLL-SFLDACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLS 118
L+ Y A ++FD + +NT+TW+ MI GY + GD + E+FEE ++
Sbjct: 487 LDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQ---- 542
Query: 119 SMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFI 178
KP++ T ++LS C H G + GK +
Sbjct: 543 ----------------------------KPNESTFTSILSACGHTGMVN--EGKKYFSSM 572
Query: 179 VKN-GWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEA 237
K+ + + + +V+M A+ G L E+A
Sbjct: 573 YKDYNFTPSTKHYTCMVDMLARAGEL-------------------------------EQA 601
Query: 238 LVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVY- 296
L + EKM ++P+ F L C + G K + D + P Y LV
Sbjct: 602 LDIIEKMP---IQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLD--LHPDDASYYVLVSN 656
Query: 297 LVGKSGRLEEAYEIIKTMK 315
L GR +A E+ MK
Sbjct: 657 LYASDGRWNQAKEVRNLMK 675
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 200 bits (509), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 110/321 (34%), Positives = 182/321 (56%), Gaps = 6/321 (1%)
Query: 57 NCLLNAYVLLSFLD-ACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSV 115
N L+ YV + A FD MP +N V+W TMI GY++ GDVQ A E+F ++D +
Sbjct: 236 NILIGGYVNCREMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKL 295
Query: 116 SLSSMISAYNNIGSSKQGLSLFRRVLLFEG-IKPDQVTAGAVLSGCAHMGSLGLLAGKSV 174
+MI+ Y G K L LF ++L I+PD++T +V+S + +G+ G V
Sbjct: 296 VYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSF--GTWV 353
Query: 175 HGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFC 234
+I ++G +++ L +L+++Y KGG A +F + +++ +S++A+I G G
Sbjct: 354 ESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGINGMA 413
Query: 235 EEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASL 294
EA +F M + PN +TFTG+LSA +H+GLV+EG + F ++D+ +EP HY +
Sbjct: 414 TEANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMKDHNLEPSADHYGIM 473
Query: 295 VYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPED 354
V ++G++GRLEEAYE+IK+M ++PN V+G+ L A H E E +++ D
Sbjct: 474 VDMLGRAGRLEEAYELIKSMPMQPNAGVWGALLLASGLHNNVEFGEIACSHCVKL--ETD 531
Query: 355 DRGIYRLIHDLYVMGEKWEEA 375
G + +Y +W++A
Sbjct: 532 PTGYLSHLAMIYSSVGRWDDA 552
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 89/333 (26%), Positives = 167/333 (50%), Gaps = 21/333 (6%)
Query: 3 LYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLLNA 62
+Y +H +G+P S + L++C + ++ + +HA +K G ++V L+
Sbjct: 91 VYIDMHNSGIPPSSHAVTSVLRAC-GKMENMVDGKPIHAQALKNGLCGC-VYVQTGLVGL 148
Query: 63 YVLLSFLD-ACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMI 121
Y L +++ A FD++ +NTV+WN+++ GY SG++ AR VF++ P++D+VS + +I
Sbjct: 149 YSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELDEARRVFDKIPEKDAVSWNLII 208
Query: 122 SAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKN 181
S+Y G SLF + L + + G V C M LA KN
Sbjct: 209 SSYAKKGDMGNACSLFSAMPLKSPASWNILIGGYV--NCREMK----LARTYFDAMPQKN 262
Query: 182 G--WELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALV 239
G W T+++ Y K G +++A +F LM +++ L + A+I Q G ++AL
Sbjct: 263 GVSW-------ITMISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIACYTQNGKPKDALK 315
Query: 240 VFEKM--RVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYL 297
+F +M R + ++P+E+T + V+SA + G G I ++G++ SL+ L
Sbjct: 316 LFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYITEHGIKIDDLLSTSLIDL 375
Query: 298 VGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSAC 330
K G +A+++ + + + V + + + C
Sbjct: 376 YMKGGDFAKAFKMFSNLN-KKDTVSYSAMIMGC 407
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 200 bits (509), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 135/380 (35%), Positives = 205/380 (53%), Gaps = 42/380 (11%)
Query: 3 LYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLLNA 62
+YS++ R G+ + F LK+C S L LT + + ++K GF +
Sbjct: 100 VYSEMKRRGIKPNKLTFPFLLKACASFL-GLTAGRQIQVEVLKHGFD----------FDV 148
Query: 63 YVLLSFLDACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMIS 122
YV N +I Y AR+VF+E +R+ VS +S+++
Sbjct: 149 YV---------------------GNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMT 187
Query: 123 AYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNG 182
A G F ++ + PD+ T +LS C G+L L GK VH ++
Sbjct: 188 ALVENGKLNLVFECFCE-MIGKRFCPDETTMVVLLSACG--GNLSL--GKLVHSQVMVRE 242
Query: 183 WELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFE 242
ELN LG LV+MYAK G L A +VFE MV++NV +W+A+I G AQ+GF EEAL +F
Sbjct: 243 LELNCRLGTALVDMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFS 302
Query: 243 K-MRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIED-YGMEPKVHHYASLVYLVGK 300
K M+ + VRPN +TF GVL AC+H GLV++G +YF +E + ++P + HY ++V ++G+
Sbjct: 303 KMMKESSVRPNYVTFLGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGR 362
Query: 301 SGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQV-LRMVKPEDDR-GI 358
+GRL EAY+ IK M EP+ VV+ + LSAC H E E + E+V R+++ E R G
Sbjct: 363 AGRLNEAYDFIKKMPFEPDAVVWRTLLSACSIHHD-EDDEGIGEKVKKRLIELEPKRSGN 421
Query: 359 YRLIHDLYVMGEKWEEAAKL 378
++ + + W EAA++
Sbjct: 422 LVIVANRFAEARMWAEAAEV 441
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 62/119 (52%), Gaps = 1/119 (0%)
Query: 220 SWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMI 279
+W L G + E++ V+ +M+ G++PN+LTF +L ACA + GR+ +
Sbjct: 80 TWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQVEV 139
Query: 280 EDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEM 338
+G + V+ +L++L G + +A ++ M E NVV + S ++A E+ + +
Sbjct: 140 LKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEM-TERNVVSWNSIMTALVENGKLNL 197
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 200 bits (508), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 124/403 (30%), Positives = 212/403 (52%), Gaps = 46/403 (11%)
Query: 15 DSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLLNAYVLLSFL-DACI 73
D + LK+C+ ++ I + +H K+G + T L V N L++ Y FL +A +
Sbjct: 139 DHYTFPCVLKACSCS-GTIVIGRKIHGSATKVGLSST-LFVGNGLVSMYGKCGFLSEARL 196
Query: 74 LFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQ----RDSVSLSSMISAYNNIGS 129
+ DEM R+ V+WN+++VGY+++ A EV E D+ +++S++ A +N +
Sbjct: 197 VLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTT 256
Query: 130 SK---------------------------------QGLSLFRRVLLFEGIKPDQVTAGAV 156
+ + L+ R + +G +PD V+ +V
Sbjct: 257 ENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSR-MEADGFEPDAVSITSV 315
Query: 157 LSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVER 216
L C +L L GK +HG+I + N L L++MYAK G L A VFE M R
Sbjct: 316 LPACGDTSALSL--GKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSR 373
Query: 217 NVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYF 276
+V+SWTA+I G +A+ +F K++ +G+ P+ + F L+AC+HAGL+EEGR F
Sbjct: 374 DVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCF 433
Query: 277 KMIED-YGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQ 335
K++ D Y + P++ H A +V L+G++G+++EAY I+ M +EPN V+G+ L AC+ H
Sbjct: 434 KLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSD 493
Query: 336 FEMAERVIEQVLRMVKPEDDRGIYRLIHDLYVMGEKWEEAAKL 378
++ +++ ++ PE G Y L+ ++Y +WEE +
Sbjct: 494 TDIGLLAADKLFQLA-PEQS-GYYVLLSNIYAKAGRWEEVTNI 534
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 126/258 (48%), Gaps = 10/258 (3%)
Query: 89 MIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKP 148
++ Y+ DV AR+VF+E P+R+ + ++ MI +Y N G +G+ +F + ++P
Sbjct: 80 LMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFG-TMCGCNVRP 138
Query: 149 DQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAM 208
D T VL C+ G++ + G+ +HG K G +G LV+MY K G L A +
Sbjct: 139 DHYTFPCVLKACSCSGTI--VIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARL 196
Query: 209 VFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGL 268
V + M R+V+SW +L+ G AQ ++AL V +M + + T +L A ++
Sbjct: 197 VLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNT-- 254
Query: 269 VEEGRRYFK-MIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKV---EPNVVVFG 324
E Y K M G + V + ++ + K+ EA E+ M+ EP+ V
Sbjct: 255 TTENVMYVKDMFFKMGKKSLV-SWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSIT 313
Query: 325 SFLSACKEHKQFEMAERV 342
S L AC + + +++
Sbjct: 314 SVLPACGDTSALSLGKKI 331
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 87/186 (46%), Gaps = 2/186 (1%)
Query: 172 KSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQW 231
++VH I+ N+ LG L+ YA + +A VF+ + ERNV+ +I
Sbjct: 59 RTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNN 118
Query: 232 GFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHY 291
GF E + VF M VRP+ TF VL AC+ +G + GR+ G+ +
Sbjct: 119 GFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVG 178
Query: 292 ASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVK 351
LV + GK G L EA ++ M +VV + S + ++++F+ A V + + VK
Sbjct: 179 NGLVSMYGKCGFLSEARLVLDEMS-RRDVVSWNSLVVGYAQNQRFDDALEVCRE-MESVK 236
Query: 352 PEDDRG 357
D G
Sbjct: 237 ISHDAG 242
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 199 bits (507), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 118/381 (30%), Positives = 212/381 (55%), Gaps = 12/381 (3%)
Query: 1 MHLYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLL 60
+ + ++ +G+ D F +++C + L + + +HA++++ H N L+
Sbjct: 271 LEMVRRMVSSGIELDEFTYPSVIRACAT-AGLLQLGKQVHAYVLRR--EDFSFHFDNSLV 327
Query: 61 NAYVLL-SFLDACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSS 119
+ Y F +A +F++MP ++ V+WN ++ GY SG + A+ +F+E +++ +S
Sbjct: 328 SLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMI 387
Query: 120 MISAYNNIGSSKQGLSLFRRVLLFEGIKP-DQVTAGAVLSGCAHMGSLGLLAGKSVHGFI 178
MIS G ++GL LF + EG +P D +GA+ S CA +G+ G+ H +
Sbjct: 388 MISGLAENGFGEEGLKLFS-CMKREGFEPCDYAFSGAIKS-CAVLGAY--CNGQQYHAQL 443
Query: 179 VKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEAL 238
+K G++ + G L+ MYAK GV+ A VF M + +SW ALI Q G EA+
Sbjct: 444 LKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAV 503
Query: 239 VVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIED-YGMEPKVHHYASLVYL 297
V+E+M G+RP+ +T VL+AC+HAGLV++GR+YF +E Y + P HYA L+ L
Sbjct: 504 DVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDL 563
Query: 298 VGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPEDDRG 357
+ +SG+ +A +I+++ +P ++ + LS C+ H E+ +++ ++ PE D G
Sbjct: 564 LCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLI-PEHD-G 621
Query: 358 IYRLIHDLYVMGEKWEEAAKL 378
Y L+ +++ +WEE A++
Sbjct: 622 TYMLLSNMHAATGQWEEVARV 642
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 104/344 (30%), Positives = 167/344 (48%), Gaps = 60/344 (17%)
Query: 32 SLTIIQHLHAHIIKLGFAPTHLHVANCLLNAYVLLSFLD-ACILFDEMPNRNTVTWNTMI 90
SL + + +H +II GF P H+ N L++ Y S L+ A LFDE+ + + TM+
Sbjct: 29 SLQLARAVHGNIITFGFQP-RAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMV 87
Query: 91 VGYSRSGDVQRAREVFEEAP--QRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKP 148
GY SGD+ AR VFE+AP RD+V ++MI+ +++ ++LF + + EG KP
Sbjct: 88 SGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCK-MKHEGFKP 146
Query: 149 DQVTAGAVLSGCAHMGSLGLLAGK-----SVHGFIVKNGWELNAELGATLVNMYAK---- 199
D T +VL+G L L+A H +K+G + LV++Y+K
Sbjct: 147 DNFTFASVLAG------LALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASS 200
Query: 200 GGVLRNAAMVFELMVERNVLSWT--------------------------------ALICG 227
+L +A VF+ ++E++ SWT A+I G
Sbjct: 201 PSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISG 260
Query: 228 AAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRR---YFKMIEDYGM 284
GF +EAL + +M +G+ +E T+ V+ ACA AGL++ G++ Y ED+
Sbjct: 261 YVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSF 320
Query: 285 EPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLS 328
H SLV L K G+ +EA I + M + ++V + + LS
Sbjct: 321 ----HFDNSLVSLYYKCGKFDEARAIFEKMPAK-DLVSWNALLS 359
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 199 bits (506), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 115/379 (30%), Positives = 210/379 (55%), Gaps = 10/379 (2%)
Query: 3 LYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLLNA 62
Y + R+G+ F+ F L +C L + + H ++ GF +++ ++ +++A
Sbjct: 166 FYKEFRRSGIKFNEFSFAGLLTACVKS-RQLQLNRQAHGQVLVAGFL-SNVVLSCSIIDA 223
Query: 63 YVLLSFLD-ACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMI 121
Y ++ A FDEM ++ W T+I GY++ GD++ A ++F E P+++ VS +++I
Sbjct: 224 YAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALI 283
Query: 122 SAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKN 181
+ Y GS + L LFR+++ G+KP+Q T + L A + SL GK +HG++++
Sbjct: 284 AGYVRQGSGNRALDLFRKMIAL-GVKPEQFTFSSCLCASASIASLR--HGKEIHGYMIRT 340
Query: 182 GWELNAELGATLVNMYAKGGVLRNAAMVFELMVER-NVLSWTALICGAAQWGFCEEALVV 240
NA + ++L++MY+K G L + VF + ++ + + W +I AQ G +AL +
Sbjct: 341 NVRPNAIVISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRM 400
Query: 241 FEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFK-MIEDYGMEPKVHHYASLVYLVG 299
+ M V+PN T +L+AC+H+GLVEEG R+F+ M +G+ P HYA L+ L+G
Sbjct: 401 LDDMIKFRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLG 460
Query: 300 KSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPEDDRGIY 359
++G +E I+ M EP+ ++ + L C+ H E+ ++ ++++++ PE Y
Sbjct: 461 RAGCFKELMRKIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAADELIKL-DPESS-APY 518
Query: 360 RLIHDLYVMGEKWEEAAKL 378
L+ +Y KWE KL
Sbjct: 519 ILLSSIYADHGKWELVEKL 537
Score = 142 bits (359), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 103/374 (27%), Positives = 175/374 (46%), Gaps = 39/374 (10%)
Query: 12 VPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLLNAYVLL-SFLD 70
+PFD + L+ C SL + +H H+ GF + ++N L+ Y+ +D
Sbjct: 44 LPFD--LLASLLQQC-GDTKSLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPID 100
Query: 71 ACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSS 130
AC +FD+M RN +WN M+ GY +SG + RAR VF+ P+RD VS ++M+ Y G+
Sbjct: 101 ACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNL 160
Query: 131 KQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELG 190
+ L F + GIK ++ + +L+ C L L + HG ++ G+ N L
Sbjct: 161 HEAL-WFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQL--NRQAHGQVLVAGFLSNVVLS 217
Query: 191 ATLVNMYAKGGVLRNAAMVFELMV-------------------------------ERNVL 219
++++ YAK G + +A F+ M E+N +
Sbjct: 218 CSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPV 277
Query: 220 SWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMI 279
SWTALI G + G AL +F KM GV+P + TF+ L A A + G+ +
Sbjct: 278 SWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYM 337
Query: 280 EDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMA 339
+ P +SL+ + KSG LE + + + + + V + + +SA +H A
Sbjct: 338 IRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKA 397
Query: 340 ERVIEQVLRM-VKP 352
R+++ +++ V+P
Sbjct: 398 LRMLDDMIKFRVQP 411
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 199 bits (505), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 130/379 (34%), Positives = 204/379 (53%), Gaps = 41/379 (10%)
Query: 3 LYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLLNA 62
++S++ +G D+ + L + T + +L+ +H++IIK GF L V N LL
Sbjct: 358 VFSQMRSSGFIPDAISLRSLLCAQTKPM-ALSQGMQIHSYIIKWGFL-ADLTVCNSLLTM 415
Query: 63 YVLLSFLDACI-LFDEMPNR-NTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSM 120
Y S L C LF++ N ++V+WNT++ +Q + V
Sbjct: 416 YTFCSDLYCCFNLFEDFRNNADSVSWNTILTAC-----LQHEQPV--------------- 455
Query: 121 ISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVK 180
+ L LF+ +L+ E +PD +T G +L GC + SL L G VH + +K
Sbjct: 456 -----------EMLRLFKLMLVSE-CEPDHITMGNLLRGCVEISSLKL--GSQVHCYSLK 501
Query: 181 NGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVV 240
G + L++MYAK G L A +F+ M R+V+SW+ LI G AQ GF EEAL++
Sbjct: 502 TGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALIL 561
Query: 241 FEKMRVAGVRPNELTFTGVLSACAHAGLVEEG-RRYFKMIEDYGMEPKVHHYASLVYLVG 299
F++M+ AG+ PN +TF GVL+AC+H GLVEEG + Y M ++G+ P H + +V L+
Sbjct: 562 FKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLA 621
Query: 300 KSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPEDDRGIY 359
++GRL EA I MK+EP+VVV+ + LSACK +A++ E +L+ + P + +
Sbjct: 622 RAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAAENILK-IDPFNSTA-H 679
Query: 360 RLIHDLYVMGEKWEEAAKL 378
L+ ++ WE AA L
Sbjct: 680 VLLCSMHASSGNWENAALL 698
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/335 (24%), Positives = 150/335 (44%), Gaps = 34/335 (10%)
Query: 1 MHLYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLL 60
+ LY K+ + + D F +K+C S + + + LHA +IKL + +HL
Sbjct: 153 IRLYLKMLQEDLVPDQFAFGSIIKACASS-SDVGLGKQLHAQVIKLE-SSSHL------- 203
Query: 61 NAYVLLSFLDACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSM 120
+ N +I Y R + A VF P +D +S SS+
Sbjct: 204 -----------------------IAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSI 240
Query: 121 ISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVK 180
I+ ++ +G + LS + +L F P++ G+ L C+ + L G +HG +K
Sbjct: 241 IAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSL--LRPDYGSQIHGLCIK 298
Query: 181 NGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVV 240
+ NA G +L +MYA+ G L +A VF+ + + SW +I G A G+ +EA+ V
Sbjct: 299 SELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSV 358
Query: 241 FEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGK 300
F +MR +G P+ ++ +L A + +G + I +G + SL+ +
Sbjct: 359 FSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTF 418
Query: 301 SGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQ 335
L + + + + + V + + L+AC +H+Q
Sbjct: 419 CSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQ 453
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 138/300 (46%), Gaps = 52/300 (17%)
Query: 82 NTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVL 141
+T+ N ++ Y + G ++ AREVF+ P+R+ VS +S+I+ Y+ G + + L+ + +
Sbjct: 101 DTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLK-M 159
Query: 142 LFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGA--TLVNMYAK 199
L E + PDQ G+++ CA +GL GK +H ++K E ++ L A L+ MY +
Sbjct: 160 LQEDLVPDQFAFGSIIKACASSSDVGL--GKQLHAQVIK--LESSSHLIAQNALIAMYVR 215
Query: 200 GGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGV-RPNELTFTG 258
+ +A+ VF + ++++SW+++I G +Q GF EAL ++M GV PNE F
Sbjct: 216 FNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGS 275
Query: 259 VLSAC-----------------------------------AHAGLVEEGRRYFKMIEDYG 283
L AC A G + RR F IE
Sbjct: 276 SLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIE--- 332
Query: 284 MEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVE---PNVVVFGSFLSACKEHKQFEMAE 340
P + ++ + +G +EA + M+ P+ + S L C + K +++
Sbjct: 333 -RPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLL--CAQTKPMALSQ 389
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 95/206 (46%), Gaps = 35/206 (16%)
Query: 160 CAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVL 219
CA S L G+ +H I+ + + + L +++MY K G LR+A VF+ M ERN++
Sbjct: 75 CACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLV 134
Query: 220 SWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRY---- 275
S+T++I G +Q G EA+ ++ KM + P++ F ++ ACA + V G++
Sbjct: 135 SYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQV 194
Query: 276 ---------------------FKMIED-----YGMEPK-VHHYASLVYLVGKSGRLEEAY 308
F + D YG+ K + ++S++ + G EA
Sbjct: 195 IKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEAL 254
Query: 309 EIIKTM----KVEPNVVVFGSFLSAC 330
+K M PN +FGS L AC
Sbjct: 255 SHLKEMLSFGVFHPNEYIFGSSLKAC 280
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 198 bits (504), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 122/380 (32%), Positives = 212/380 (55%), Gaps = 20/380 (5%)
Query: 1 MHLYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLL 60
+ L+ + R+ + D F LK+CT SL +H+ I+K G A ++ V L+
Sbjct: 468 LFLFVSMLRSRIEPDEFTFGSILKACTGG--SLGYGMEIHSSIVKSGMA-SNSSVGCSLI 524
Query: 61 NAYVLLSFLDACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSM 120
+ Y C + +E ++ + V SG ++ ++ + Q VS +S+
Sbjct: 525 DMY------SKCGMIEEAEKIHSRFFQRANV----SGTMEELEKMHNKRLQEMCVSWNSI 574
Query: 121 ISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVK 180
IS Y S+ LF R++ GI PD+ T VL CA++ S GL GK +H ++K
Sbjct: 575 ISGYVMKEQSEDAQMLFTRMMEM-GITPDKFTYATVLDTCANLASAGL--GKQIHAQVIK 631
Query: 181 NGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVV 240
+ + + +TLV+MY+K G L ++ ++FE + R+ ++W A+ICG A G EEA+ +
Sbjct: 632 KELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQL 691
Query: 241 FEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIE-DYGMEPKVHHYASLVYLVG 299
FE+M + ++PN +TF +L ACAH GL+++G YF M++ DYG++P++ HY+++V ++G
Sbjct: 692 FERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILG 751
Query: 300 KSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHK-QFEMAERVIEQVLRMVKPEDDRGI 358
KSG+++ A E+I+ M E + V++ + L C H+ E+AE +LR+ P+D
Sbjct: 752 KSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRL-DPQDSSA- 809
Query: 359 YRLIHDLYVMGEKWEEAAKL 378
Y L+ ++Y WE+ + L
Sbjct: 810 YTLLSNVYADAGMWEKVSDL 829
Score = 142 bits (357), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 86/245 (35%), Positives = 131/245 (53%), Gaps = 6/245 (2%)
Query: 21 FTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLLNAYV-LLSFLDACILFDEMP 79
F K C +L + + HAH+I GF PT V NCLL Y F+ A ++FD+MP
Sbjct: 53 FVFKECAKQ-GALELGKQAHAHMIISGFRPTTF-VLNCLLQVYTNSRDFVSASMVFDKMP 110
Query: 80 NRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRR 139
R+ V+WN MI GYS+S D+ +A F P RD VS +SM+S Y G S + + +F
Sbjct: 111 LRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVD 170
Query: 140 VLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAK 199
+ EGI+ D T +L C+ + L G +HG +V+ G + + + L++MYAK
Sbjct: 171 -MGREGIEFDGRTFAIILKVCSFLEDTSL--GMQIHGIVVRVGCDTDVVAASALLDMYAK 227
Query: 200 GGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGV 259
G + VF+ + E+N +SW+A+I G Q AL F++M+ ++ + V
Sbjct: 228 GKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASV 287
Query: 260 LSACA 264
L +CA
Sbjct: 288 LRSCA 292
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 87/377 (23%), Positives = 166/377 (44%), Gaps = 70/377 (18%)
Query: 3 LYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFA-PTHLHVANCLLN 61
L+ +L +G+ FD + ++C +++ L + G A + L + C+ N
Sbjct: 369 LFHRLMSSGLGFDEISLSGVFRACA-------LVKGLSEGLQIYGLAIKSSLSLDVCVAN 421
Query: 62 AYVLL-----SFLDACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVS 116
A + + + +A +FDEM R+ V+WN
Sbjct: 422 AAIDMYGKCQALAEAFRVFDEMRRRDAVSWN----------------------------- 452
Query: 117 LSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHG 176
++I+A+ G + L LF +L I+PD+ T G++L C GSLG G +H
Sbjct: 453 --AIIAAHEQNGKGYETLFLFVS-MLRSRIEPDEFTFGSILKACTG-GSLGY--GMEIHS 506
Query: 177 FIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVER-NV----------------- 218
IVK+G N+ +G +L++MY+K G++ A + +R NV
Sbjct: 507 SIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQE 566
Query: 219 --LSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYF 276
+SW ++I G E+A ++F +M G+ P++ T+ VL CA+ G++
Sbjct: 567 MCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIH 626
Query: 277 KMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQF 336
+ ++ V+ ++LV + K G L ++ ++ + + V + + + H +
Sbjct: 627 AQVIKKELQSDVYICSTLVDMYSKCGDLHDS-RLMFEKSLRRDFVTWNAMICGYAHHGKG 685
Query: 337 EMAERVIEQ-VLRMVKP 352
E A ++ E+ +L +KP
Sbjct: 686 EEAIQLFERMILENIKP 702
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 126/288 (43%), Gaps = 36/288 (12%)
Query: 23 LKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLLNAYVLLSFLDACILFDEMPNRN 82
L+SC + L L + LHAH +K FA + V + LD
Sbjct: 288 LRSCAA-LSELRLGGQLHAHALKSDFAA----------DGIVRTATLDM----------- 325
Query: 83 TVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLL 142
Y++ ++Q A+ +F+ + + S ++MI+ Y+ + L LF R L+
Sbjct: 326 ----------YAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHR-LM 374
Query: 143 FEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGV 202
G+ D+++ V CA + GL G ++G +K+ L+ + ++MY K
Sbjct: 375 SSGLGFDEISLSGVFRACALVK--GLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQA 432
Query: 203 LRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSA 262
L A VF+ M R+ +SW A+I Q G E L +F M + + P+E TF +L A
Sbjct: 433 LAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKA 492
Query: 263 CAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEI 310
C G + G I GM SL+ + K G +EEA +I
Sbjct: 493 CT-GGSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKI 539
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 79/365 (21%), Positives = 155/365 (42%), Gaps = 71/365 (19%)
Query: 1 MHLYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLL 60
+ ++ + R G+ FD LK C S L ++ +H ++++G T + A+ LL
Sbjct: 165 IEVFVDMGREGIEFDGRTFAIILKVC-SFLEDTSLGMQIHGIVVRVG-CDTDVVAASALL 222
Query: 61 NAYVL-LSFLDACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSS 119
+ Y F+++ +F +P +N+V+W+ +I G ++ + A + F+E Q+ + +S
Sbjct: 223 DMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEM-QKVNAGVSQ 281
Query: 120 MISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIV 179
I A +VL CA + L L G +H +
Sbjct: 282 SIYA-------------------------------SVLRSCAALSELRL--GGQLHAHAL 308
Query: 180 KNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALV 239
K+ + + + ++MYAK +++A ++F+ N S+ A+I G +Q +AL+
Sbjct: 309 KSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALL 368
Query: 240 VFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVG 299
+F ++ +G+ +E++ +GV ACA + EG + + + + V + + + G
Sbjct: 369 LFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYG 428
Query: 300 KSGRLEEAYEIIKTM----------------------------------KVEPNVVVFGS 325
K L EA+ + M ++EP+ FGS
Sbjct: 429 KCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGS 488
Query: 326 FLSAC 330
L AC
Sbjct: 489 ILKAC 493
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/157 (21%), Positives = 75/157 (47%), Gaps = 1/157 (0%)
Query: 193 LVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPN 252
++N Y+K + A F +M R+V+SW +++ G Q G +++ VF M G+ +
Sbjct: 120 MINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFD 179
Query: 253 ELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIK 312
TF +L C+ G + ++ G + V ++L+ + K R E+ + +
Sbjct: 180 GRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQ 239
Query: 313 TMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRM 349
+ E N V + + ++ C ++ +A + +++ ++
Sbjct: 240 GIP-EKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKV 275
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 198 bits (503), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 117/383 (30%), Positives = 212/383 (55%), Gaps = 12/383 (3%)
Query: 3 LYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHL----HAHIIKLGFAPTHLHVANC 58
L ++ +G D + + LK+ S ++ + + L HA IIK + +
Sbjct: 122 LVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIKCDVELDDVLIT-A 180
Query: 59 LLNAYVLLSFLDAC-ILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSL 117
L++ YV L++ +F+ M + N V +MI GY G V+ A E+F +D V
Sbjct: 181 LVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFNTTKVKDIVVY 240
Query: 118 SSMISAYNNIG-SSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHG 176
++M+ ++ G ++K+ + ++ + G P+ T +V+ C+ + S + G+ VH
Sbjct: 241 NAMVEGFSRSGETAKRSVDMYIS-MQRAGFHPNISTFASVIGACSVLTSHEV--GQQVHA 297
Query: 177 FIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEE 236
I+K+G + ++G++L++MYAK G + +A VF+ M E+NV SWT++I G + G EE
Sbjct: 298 QIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDGYGKNGNPEE 357
Query: 237 ALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFK-MIEDYGMEPKVHHYASLV 295
AL +F +M+ + PN +TF G LSAC+H+GLV++G F+ M DY M+PK+ HYA +V
Sbjct: 358 ALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMKPKMEHYACIV 417
Query: 296 YLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPEDD 355
L+G++G L +A+E + M P+ ++ + LS+C H E+A ++ ++ +
Sbjct: 418 DLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSCNLHGNVELASIAASELFKL-NADKR 476
Query: 356 RGIYRLIHDLYVMGEKWEEAAKL 378
G Y + ++Y +KW+ +K+
Sbjct: 477 PGAYLALSNVYASNDKWDNVSKI 499
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 116/427 (27%), Positives = 163/427 (38%), Gaps = 121/427 (28%)
Query: 37 QHLHAHIIKLGFAPTHLHVANCLLNAYVLLSFLD-ACILFDEMPNRNTVTWNTMIVGYSR 95
+ +HA IIK GF P L+++ LL ++ L A +FDE+P +N MI GY +
Sbjct: 54 KKIHADIIKTGFQP-DLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGYLK 112
Query: 96 SGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGA 155
G V K+ L L +R + + G K D T
Sbjct: 113 HGLV-------------------------------KELLLLVQR-MSYSGEKADGYTLSM 140
Query: 156 VLSGCAHMGSLGLLAG---KSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFEL 212
VL GS +L + VH I+K EL+ L LV+ Y K G L +A VFE
Sbjct: 141 VLKASNSRGSTMILPRSLCRLVHARIIKCDVELDDVLITALVDTYVKSGKLESARTVFET 200
Query: 213 MVERNVLSWTALICGAAQWGFCEEALVVFEKMRV-------------------------- 246
M + NV+ T++I G GF E+A +F +V
Sbjct: 201 MKDENVVCCTSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDM 260
Query: 247 ------AGVRPNELTFTGVLSAC-----------------------------------AH 265
AG PN TF V+ AC A
Sbjct: 261 YISMQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAK 320
Query: 266 AGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMK---VEPNVVV 322
G + + RR F ++ E V + S++ GK+G EEA E+ MK +EPN V
Sbjct: 321 CGGINDARRVFDQMQ----EKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVT 376
Query: 323 FGSFLSACKEHKQFEMAERVIEQVLR--MVKPEDDRGIYRLIHDLYVMGEKWEEAAKLGP 380
F LSAC + + E + R +KP+ + Y I DL MG A L
Sbjct: 377 FLGALSACSHSGLVDKGYEIFESMQRDYSMKPKMEH--YACIVDL--MG----RAGDLNK 428
Query: 381 GFDFNRS 387
F+F R+
Sbjct: 429 AFEFARA 435
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 96/203 (47%), Gaps = 9/203 (4%)
Query: 145 GIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLR 204
+ P + AGA+ H+ S AGK +H I+K G++ + + L+ ++ K G L
Sbjct: 30 SLSPAKYIAGALQE---HINSPAPKAGKKIHADIIKTGFQPDLNISIKLLILHLKCGCLS 86
Query: 205 NAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACA 264
A VF+ + + + ++ +I G + G +E L++ ++M +G + + T + VL A
Sbjct: 87 YARQVFDELPKPTLSAYNYMISGYLKHGLVKELLLLVQRMSYSGEKADGYTLSMVLKASN 146
Query: 265 HAG-LVEEGRRYFKMIEDYGMEPKVH----HYASLVYLVGKSGRLEEAYEIIKTMKVEPN 319
G + R +++ ++ V +LV KSG+LE A + +TMK E N
Sbjct: 147 SRGSTMILPRSLCRLVHARIIKCDVELDDVLITALVDTYVKSGKLESARTVFETMKDE-N 205
Query: 320 VVVFGSFLSACKEHKQFEMAERV 342
VV S +S E AE +
Sbjct: 206 VVCCTSMISGYMNQGFVEDAEEI 228
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 198 bits (503), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 122/400 (30%), Positives = 217/400 (54%), Gaps = 47/400 (11%)
Query: 1 MHLYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLL 60
+ L ++ + G D + V L S S+L + I + HA +I+ G
Sbjct: 404 LMLVYEMQKQGFKID-YITVTALLSAASNLRNKEIGKQTHAFLIRQG------------- 449
Query: 61 NAYVLLSFLDACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEA--PQRDSVSLS 118
I F+ M + +I YS+SG ++ ++++FE + +RD + +
Sbjct: 450 ------------IQFEGMNS-------YLIDMYSKSGLIRISQKLFEGSGYAERDQATWN 490
Query: 119 SMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFI 178
SMIS Y G +++ +FR+ +L + I+P+ VT ++L C+ +GS+ L GK +HGF
Sbjct: 491 SMISGYTQNGHTEKTFLVFRK-MLEQNIRPNAVTVASILPACSQIGSVDL--GKQLHGFS 547
Query: 179 VKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEAL 238
++ + N + + LV+MY+K G ++ A +F ERN +++T +I G Q G E A+
Sbjct: 548 IRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAI 607
Query: 239 VVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYF-KMIEDYGMEPKVHHYASLVYL 297
+F M+ +G++P+ +TF VLSAC+++GL++EG + F +M E Y ++P HY + +
Sbjct: 608 SLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQPSSEHYCCITDM 667
Query: 298 VGKSGRLEEAYEIIKTMKVEPNVV-VFGSFLSACKEHKQFEMAERVIEQVLRMVKPEDDR 356
+G+ GR+ EAYE +K + E N+ ++GS L +CK H + E+AE V E++ + K ++
Sbjct: 668 LGRVGRVNEAYEFVKGLGEEGNIAELWGSLLGSCKLHGELELAETVSERLAKFDKGKNFS 727
Query: 357 GIYRLIHDLYVMGEKWEEAAKLGPGF-------DFNRSGI 389
G L+ ++Y +KW+ K+ G + RSGI
Sbjct: 728 GYEVLLSNMYAEEQKWKSVDKVRRGMREKGLKKEVGRSGI 767
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/285 (30%), Positives = 148/285 (51%), Gaps = 17/285 (5%)
Query: 75 FDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGL 134
F E+P V N+++V YSR G V ++ VF +RD VS ++MISA+ G +GL
Sbjct: 348 FRELP---IVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGL 404
Query: 135 SLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLV 194
L + +G K D +T A+LS +++ + + GK H F+++ G + + + L+
Sbjct: 405 MLVYE-MQKQGFKIDYITVTALLSAASNLRNKEI--GKQTHAFLIRQGIQFEG-MNSYLI 460
Query: 195 NMYAKGGVLRNAAMVFE--LMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPN 252
+MY+K G++R + +FE ER+ +W ++I G Q G E+ +VF KM +RPN
Sbjct: 461 DMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPN 520
Query: 253 ELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIK 312
+T +L AC+ G V+ G++ ++ V ++LV + K+G ++ A ++
Sbjct: 521 AVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFS 580
Query: 313 TMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRM----VKPE 353
K E N V + + + +H M ER I L M +KP+
Sbjct: 581 QTK-ERNSVTYTTMILGYGQHG---MGERAISLFLSMQESGIKPD 621
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 132/291 (45%), Gaps = 37/291 (12%)
Query: 87 NTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGI 146
++ I Y+ GD++ +R VF+ +R+ ++MI Y + + LF + + I
Sbjct: 255 SSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEI 314
Query: 147 KPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNA 206
D+VT S + + + L G+ HGF+ KN EL + +L+ MY++ G + +
Sbjct: 315 VSDEVTYLLAASAVSALQQVEL--GRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKS 372
Query: 207 AMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACA-- 264
VF M ER+V+SW +I Q G +E L++ +M+ G + + +T T +LSA +
Sbjct: 373 FGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNL 432
Query: 265 ---------HAGLVEEGRRY--------------------FKMIEDYG-MEPKVHHYASL 294
HA L+ +G ++ K+ E G E + S+
Sbjct: 433 RNKEIGKQTHAFLIRQGIQFEGMNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSM 492
Query: 295 VYLVGKSGRLEEAYEIIKTM---KVEPNVVVFGSFLSACKEHKQFEMAERV 342
+ ++G E+ + + + M + PN V S L AC + ++ +++
Sbjct: 493 ISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQL 543
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 116/250 (46%), Gaps = 28/250 (11%)
Query: 95 RSGDVQRAREVFEEAPQRDSVSLSSMISAY--NNIGSSKQGLSLFRRVLLFEGIKP---- 148
+ G+ Q AR++F+ P+ +V +++I + NN+ + L + R+ + P
Sbjct: 51 QDGNPQLARQLFDAIPKPTTVLWNTIIIGFICNNL--PHEALLFYSRM---KKTAPFTNC 105
Query: 149 DQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYA---------K 199
D T + L CA +L AGK+VH +++ + + +L+NMY +
Sbjct: 106 DAYTYSSTLKACAETKNLK--AGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFE 163
Query: 200 GGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGV 259
V+R VF+ M +NV++W LI + G EA F M V+P+ ++F V
Sbjct: 164 YDVVRK---VFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNV 220
Query: 260 LSACAHAGLVEEGRRYFKMIEDYGME--PKVHHYASLVYLVGKSGRLEEAYEIIKTMKVE 317
A + + +++ ++ ++ G E + +S + + + G +E + + + VE
Sbjct: 221 FPAVSISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSC-VE 279
Query: 318 PNVVVFGSFL 327
N+ V+ + +
Sbjct: 280 RNIEVWNTMI 289
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 197 bits (502), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 136/449 (30%), Positives = 222/449 (49%), Gaps = 82/449 (18%)
Query: 1 MHLYSKLHRTGVPFDSFCIVFTLKSCTSH--LHSLTII-QHLHAHIIKLGFAPTHLHVAN 57
M L G+ DS +K C S+ +H +I +HL+ + G P + + N
Sbjct: 46 MKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFN----GHRPM-MFLVN 100
Query: 58 CLLNAYVLLSFL-DACILFDEMPNRNTVTWNTMIVGYSRSGDVQRARE------------ 104
L+N YV + L DA LFD+MP RN ++W TMI YS+ Q+A E
Sbjct: 101 VLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRP 160
Query: 105 ------------------------VFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRV 140
+ +E + D S++I + +G + LS+F +
Sbjct: 161 NVYTYSSVLRSCNGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEM 220
Query: 141 L-------------------------LFEGIK-----PDQVTAGAVLSGCAHMGSLGLLA 170
+ LF+ +K +Q T +VL C + L L
Sbjct: 221 VTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLEL-- 278
Query: 171 GKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQ 230
G H IVK ++ + L LV+MY K G L +A VF M ER+V++W+ +I G AQ
Sbjct: 279 GMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQ 336
Query: 231 WGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFK-MIEDYGMEPKVH 289
G+ +EAL +FE+M+ +G +PN +T GVL AC+HAGL+E+G YF+ M + YG++P
Sbjct: 337 NGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVRE 396
Query: 290 HYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRM 349
HY ++ L+GK+G+L++A +++ M+ EP+ V + + L AC+ + +AE ++V+ +
Sbjct: 397 HYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIAL 456
Query: 350 VKPEDDRGIYRLIHDLYVMGEKWEEAAKL 378
PE D G Y L+ ++Y +KW+ ++
Sbjct: 457 -DPE-DAGTYTLLSNIYANSQKWDSVEEI 483
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 197 bits (502), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 108/324 (33%), Positives = 189/324 (58%), Gaps = 6/324 (1%)
Query: 57 NCLLNAYVLLSFL-DACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSV 115
N +++ YV + DA LFD MP R+ VTW TMI GY++ G V A+ +F++ P RD V
Sbjct: 256 NSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVV 315
Query: 116 SLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVH 175
+ +SM++ Y + L +F + + PD T VL A +G L +H
Sbjct: 316 AYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLS--KAIDMH 373
Query: 176 GFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCE 235
+IV+ + L +LG L++MY+K G +++A +VFE + +++ W A+I G A G E
Sbjct: 374 LYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGE 433
Query: 236 EALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMI-EDYGMEPKVHHYASL 294
A + ++ ++P+++TF GVL+AC+H+GLV+EG F+++ + +EP++ HY +
Sbjct: 434 SAFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCM 493
Query: 295 VYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPED 354
V ++ +SG +E A +I+ M VEPN V++ +FL+AC HK+FE E V + ++ ++
Sbjct: 494 VDILSRSGSIELAKNLIEEMPVEPNDVIWRTFLTACSHHKEFETGELVAKHLI--LQAGY 551
Query: 355 DRGIYRLIHDLYVMGEKWEEAAKL 378
+ Y L+ ++Y W++ ++
Sbjct: 552 NPSSYVLLSNMYASFGMWKDVRRV 575
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 90/359 (25%), Positives = 173/359 (48%), Gaps = 50/359 (13%)
Query: 10 TGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLLNAYVLLSFL 69
GV D F + LK+C S L + +H + K G + L + NCL+ Y+ L
Sbjct: 115 NGVSVDKFSLSLVLKAC-SRLGFVKGGMQIHGFLKKTGLW-SDLFLQNCLIGLYLKCGCL 172
Query: 70 D-ACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAP--QRDSVSLSSMISAYNN 126
+ +FD MP R++V++N+MI GY + G + ARE+F+ P ++ +S +SMIS Y
Sbjct: 173 GLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSARELFDLMPMEMKNLISWNSMISGY-- 230
Query: 127 IGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELN 186
+ G+ + + L + + D ++ +++ G G + K + + + +
Sbjct: 231 -AQTSDGVDIASK-LFADMPEKDLISWNSMIDGYVKHGRIE--DAKGLFDVMPRR----D 282
Query: 187 AELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKM-R 245
AT+++ YAK G + +A +F+ M R+V+++ +++ G Q + EAL +F M +
Sbjct: 283 VVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEK 342
Query: 246 VAGVRPNELTFTGVLSACAHAG-----------LVEE-----GRRYFKMIEDY------- 282
+ + P++ T VL A A G +VE+ G+ +I+ Y
Sbjct: 343 ESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQ 402
Query: 283 -------GMEPK-VHHYASLVYLVGKSGRLEEAYEI---IKTMKVEPNVVVFGSFLSAC 330
G+E K + H+ +++ + G E A+++ I+ + ++P+ + F L+AC
Sbjct: 403 HAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERLSLKPDDITFVGVLNAC 461
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 197 bits (500), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 111/368 (30%), Positives = 202/368 (54%), Gaps = 39/368 (10%)
Query: 14 FDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLLNAYVLLSFLDACI 73
DS +V + +C S + + + + +H+ +IK GF
Sbjct: 181 LDSMGLVSVISAC-SRVPAKGLTESIHSFVIKRGF------------------------- 214
Query: 74 LFDEMPNRNTVTWNTMIVGYSRSGD--VQRAREVFEEAPQRDSVSLSSMISAYNNIGSSK 131
+R NT++ Y++ G+ V AR++F++ +D VS +S++S Y G S
Sbjct: 215 ------DRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSN 268
Query: 132 QGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGA 191
+ +FRR++ + + + +T VL +H G+L + GK +H +++ G E + +G
Sbjct: 269 EAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRI--GKCIHDQVIRMGLEDDVIVGT 326
Query: 192 TLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRP 251
++++MY K G + A F+ M +NV SWTA+I G G +AL +F M +GVRP
Sbjct: 327 SIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRP 386
Query: 252 NELTFTGVLSACAHAGLVEEGRRYFKMIED-YGMEPKVHHYASLVYLVGKSGRLEEAYEI 310
N +TF VL+AC+HAGL EG R+F ++ +G+EP + HY +V L+G++G L++AY++
Sbjct: 387 NYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDL 446
Query: 311 IKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPEDDRGIYRLIHDLYVMGE 370
I+ MK++P+ +++ S L+AC+ HK E+AE + ++ + + G Y L+ +Y
Sbjct: 447 IQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFEL--DSSNCGYYMLLSHIYADAG 504
Query: 371 KWEEAAKL 378
+W++ ++
Sbjct: 505 RWKDVERV 512
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 74/237 (31%), Positives = 133/237 (56%), Gaps = 10/237 (4%)
Query: 87 NTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGI 146
+ +IV YS G ++ AR+VF+E P+R+ VS +SMI Y+ G++ +SLF+ +L+ E
Sbjct: 115 SALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDEND 174
Query: 147 KPDQVTAG-----AVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGG 201
D + +V+S C+ + + GL +S+H F++K G++ +G TL++ YAKGG
Sbjct: 175 DDDAMFLDSMGLVSVISACSRVPAKGLT--ESIHSFVIKRGFDRGVSVGNTLLDAYAKGG 232
Query: 202 V--LRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKM-RVAGVRPNELTFTG 258
+ A +F+ +V+++ +S+ +++ AQ G EA VF ++ + V N +T +
Sbjct: 233 EGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLST 292
Query: 259 VLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMK 315
VL A +H+G + G+ + G+E V S++ + K GR+E A + MK
Sbjct: 293 VLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMK 349
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 196 bits (498), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 128/381 (33%), Positives = 197/381 (51%), Gaps = 41/381 (10%)
Query: 1 MHLYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLL 60
+ L+ L GV +DSF LK+C S L L + + +HA + KLG + + V L+
Sbjct: 270 LKLFVDLVTEGVEWDSFVFSVVLKACAS-LEELNLGKQIHACVAKLGL-ESEVSVGTPLV 327
Query: 61 NAYVLLS-FLDACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSS 119
+ Y+ S F AC F E+ N V+W+ +I GY + + A + F+ +++ L+S
Sbjct: 328 DFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNS 387
Query: 120 MISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIV 179
F +F+ A +VL+ C G VH +
Sbjct: 388 -----------------FTYTSIFQ--------ACSVLADCN--------IGGQVHADAI 414
Query: 180 KNGWELNAELG-ATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEAL 238
K + ++ G + L+ MY+K G L +A VFE M ++++WTA I G A +G EAL
Sbjct: 415 KRSL-IGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEAL 473
Query: 239 VVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFK-MIEDYGMEPKVHHYASLVYL 297
+FEKM G++PN +TF VL+AC+HAGLVE+G+ M+ Y + P + HY ++ +
Sbjct: 474 RLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDI 533
Query: 298 VGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPEDDRG 357
+SG L+EA + +K M EP+ + + FLS C HK E+ E E+ LR + PED G
Sbjct: 534 YARSGLLDEALKFMKNMPFEPDAMSWKCFLSGCWTHKNLELGEIAGEE-LRQLDPEDTAG 592
Query: 358 IYRLIHDLYVMGEKWEEAAKL 378
Y L +LY KWEEAA++
Sbjct: 593 -YVLPFNLYTWAGKWEEAAEM 612
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 128/273 (46%), Gaps = 6/273 (2%)
Query: 82 NTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVL 141
NT ++ Y + G + A+ VF++ + V+ + ++ Y G ++ L LF L
Sbjct: 218 NTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVD-L 276
Query: 142 LFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGG 201
+ EG++ D VL CA + L L GK +H + K G E +G LV+ Y K
Sbjct: 277 VTEGVEWDSFVFSVVLKACASLEELNL--GKQIHACVAKLGLESEVSVGTPLVDFYIKCS 334
Query: 202 VLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRP-NELTFTGVL 260
+A F+ + E N +SW+A+I G Q EEA+ F+ +R N T+T +
Sbjct: 335 SFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIF 394
Query: 261 SACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNV 320
AC+ G + + + ++L+ + K G L++A E+ ++M P++
Sbjct: 395 QACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMD-NPDI 453
Query: 321 VVFGSFLSACKEHKQFEMAERVIEQVLRM-VKP 352
V + +F+S + A R+ E+++ +KP
Sbjct: 454 VAWTAFISGHAYYGNASEALRLFEKMVSCGMKP 486
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 125/269 (46%), Gaps = 4/269 (1%)
Query: 78 MPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLF 137
+ N + + N ++ Y ++ A ++F+E + ++VS ++MISAY G + + LF
Sbjct: 113 IENPSVLLQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLF 172
Query: 138 RRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMY 197
+L G KP +L + +L G+ +H +++ G N + +VNMY
Sbjct: 173 SG-MLASGDKPPSSMYTTLLKSLVNPRALDF--GRQIHAHVIRAGLCSNTSIETGIVNMY 229
Query: 198 AKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFT 257
K G L A VF+ M + ++ T L+ G Q G +AL +F + GV + F+
Sbjct: 230 VKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFS 289
Query: 258 GVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVE 317
VL ACA + G++ + G+E +V LV K E A + ++ E
Sbjct: 290 VVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIR-E 348
Query: 318 PNVVVFGSFLSACKEHKQFEMAERVIEQV 346
PN V + + +S + QFE A + + +
Sbjct: 349 PNDVSWSAIISGYCQMSQFEEAVKTFKSL 377
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 195 bits (496), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 117/381 (30%), Positives = 208/381 (54%), Gaps = 41/381 (10%)
Query: 1 MHLYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLL 60
+ +Y ++ +CI +++ S + S+T + +HA +IK GF ++L V N +L
Sbjct: 198 LKMYKQMLLENAEVTPYCITIAVRASAS-IDSVTTGKQIHASVIKRGFQ-SNLPVMNSIL 255
Query: 61 NAYVLLSFL-DACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSS 119
+ Y +L +A F EM +++ +TWNT+I RS
Sbjct: 256 DLYCRCGYLSEAKHYFHEMEDKDLITWNTLISELERS----------------------- 292
Query: 120 MISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIV 179
S + L +F+R +G P+ T ++++ CA++ +L G+ +HG I
Sbjct: 293 ---------DSSEALLMFQR-FESQGFVPNCYTFTSLVAACANIAALN--CGQQLHGRIF 340
Query: 180 KNGWELNAELGATLVNMYAKGGVLRNAAMVF-ELMVERNVLSWTALICGAAQWGFCEEAL 238
+ G+ N EL L++MYAK G + ++ VF E++ RN++SWT+++ G G+ EA+
Sbjct: 341 RRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAV 400
Query: 239 VVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIE-DYGMEPKVHHYASLVYL 297
+F+KM +G+RP+ + F VLSAC HAGLVE+G +YF ++E +YG+ P Y +V L
Sbjct: 401 ELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDL 460
Query: 298 VGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPEDDRG 357
+G++G++ EAYE+++ M +P+ +G+ L ACK HK + R+ + + +KP+ G
Sbjct: 461 LGRAGKIGEAYELVERMPFKPDESTWGAILGACKAHKHNGLISRLAARKVMELKPK-MVG 519
Query: 358 IYRLIHDLYVMGEKWEEAAKL 378
Y ++ +Y KW + A++
Sbjct: 520 TYVMLSYIYAAEGKWVDFARV 540
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 91/413 (22%), Positives = 168/413 (40%), Gaps = 76/413 (18%)
Query: 4 YSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLLNAY 63
+ ++ + G + F + LKSC ++ L +H ++KLG + L+V N ++N Y
Sbjct: 99 FHEMVKQGTSPNEFTLSSVLKSC-RNMKVLAYGALVHGVVVKLGMEGS-LYVDNAMMNMY 156
Query: 64 VLLSFL--DACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMI 121
S AC++F ++ +N VTW T+ I
Sbjct: 157 ATCSVTMEAACLIFRDIKVKNDVTWTTL-------------------------------I 185
Query: 122 SAYNNIGSSKQGLSLFRRVLLFEG-IKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVK 180
+ + ++G GL +++++LL + P +T S + GK +H ++K
Sbjct: 186 TGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASID----SVTTGKQIHASVIK 241
Query: 181 NGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVV 240
G++ N + +++++Y + G L A F M ++++++W LI + EAL++
Sbjct: 242 RGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLI-SELERSDSSEALLM 300
Query: 241 FEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGK 300
F++ G PN TFT +++ACA+ + G++ I G V +L+ + K
Sbjct: 301 FQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAK 360
Query: 301 SGRLE--------------------------------EAYEIIKTM---KVEPNVVVFGS 325
G + EA E+ M + P+ +VF +
Sbjct: 361 CGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMA 420
Query: 326 FLSACKEHKQFEMAERVIEQVLRMVKPEDDRGIYRLIHDLYVMGEKWEEAAKL 378
LSAC+ E + + DR IY + DL K EA +L
Sbjct: 421 VLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEAYEL 473
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 119/251 (47%), Gaps = 5/251 (1%)
Query: 79 PNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFR 138
P ++ + +IV Y G V+ AR +F+E P RD V+ ++MI+ Y + + + F
Sbjct: 41 PKKHHILATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFH 100
Query: 139 RVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYA 198
++ +G P++ T +VL C +M L G VHG +VK G E + + ++NMYA
Sbjct: 101 E-MVKQGTSPNEFTLSSVLKSCRNMKVLAY--GALVHGVVVKLGMEGSLYVDNAMMNMYA 157
Query: 199 KGGVLRNAA-MVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFT 257
V AA ++F + +N ++WT LI G G L ++++M + T
Sbjct: 158 TCSVTMEAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCIT 217
Query: 258 GVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVE 317
+ A A V G++ + G + + S++ L + G L EA M+ +
Sbjct: 218 IAVRASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEME-D 276
Query: 318 PNVVVFGSFLS 328
+++ + + +S
Sbjct: 277 KDLITWNTLIS 287
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 195 bits (495), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 126/377 (33%), Positives = 203/377 (53%), Gaps = 9/377 (2%)
Query: 4 YSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLLNAY 63
Y+++ R G+ +V L + + S +Q LH I+K GF A +
Sbjct: 293 YTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQ-LHGTIVKRGFDCYDFLQATIIHFYA 351
Query: 64 VLLSFLDACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISA 123
V A F+ + + N +I G+ ++G V++AREVF++ +D S ++MIS
Sbjct: 352 VSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISG 411
Query: 124 YNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGW 183
Y S + L LFR ++ +KPD +T +V S + +GSL GK H ++ +
Sbjct: 412 YAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLE--EGKRAHDYLNFSTI 469
Query: 184 ELNAELGATLVNMYAKGGVLRNAAMVF---ELMVERNVLSWTALICGAAQWGFCEEALVV 240
N L A +++MYAK G + A +F + + + W A+ICG+A G + AL +
Sbjct: 470 PPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDL 529
Query: 241 FEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFK-MIEDYGMEPKVHHYASLVYLVG 299
+ ++ ++PN +TF GVLSAC HAGLVE G+ YF+ M D+G+EP + HY +V L+G
Sbjct: 530 YSDLQSLPIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLLG 589
Query: 300 KSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPEDDRGIY 359
K+GRLEEA E+IK M V+ +V+++G LSA + H E+AE + L + P G
Sbjct: 590 KAGRLEEAKEMIKKMPVKADVMIWGMLLSASRTHGNVEIAE-LAATELAAIDPSHG-GCK 647
Query: 360 RLIHDLYVMGEKWEEAA 376
++ ++Y +WE+ A
Sbjct: 648 VMLSNVYADAGRWEDVA 664
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 118/448 (26%), Positives = 197/448 (43%), Gaps = 75/448 (16%)
Query: 1 MHLYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLL 60
M L+ ++ G+ + + + +C SHL + + L + IKL + V+ LL
Sbjct: 158 MELFREMRNLGIMLNEVTLATVISAC-SHLGGIWDCRMLQSLAIKLKL-EGRVFVSTNLL 215
Query: 61 NAYVL-LSFLDACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSS 119
+ Y L L DA LFDEMP RN VTWN M+ GYS++G +++A E+F++ ++D VS +
Sbjct: 216 HMYCLCLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGT 275
Query: 120 MISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIV 179
MI + L + +L G+KP +V +LS A S+G G +HG IV
Sbjct: 276 MIDGCLRKNQLDEALVYYTEMLRC-GMKPSEVMMVDLLSASAR--SVGSSKGLQLHGTIV 332
Query: 180 KNGWELNAELGATLVNMYA-------------------------------KGGVLRNAAM 208
K G++ L AT+++ YA K G++ A
Sbjct: 333 KRGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQARE 392
Query: 209 VFELMVERNVLSWTALICGAAQWGFCEEALVVFEKM-RVAGVRPNELTFTGVLSACAHAG 267
VF+ ++++ SW A+I G AQ + AL +F +M + V+P+ +T V SA + G
Sbjct: 393 VFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLG 452
Query: 268 LVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEA-------------------- 307
+EEG+R + + P + A+++ + K G +E A
Sbjct: 453 SLEEGKRAHDYLNFSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNA 512
Query: 308 -----------------YEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMV 350
Y ++++ ++PN + F LSAC E+ + E +
Sbjct: 513 IICGSATHGHAKLALDLYSDLQSLPIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDH 572
Query: 351 KPEDDRGIYRLIHDLYVMGEKWEEAAKL 378
E D Y + DL + EEA ++
Sbjct: 573 GIEPDIKHYGCMVDLLGKAGRLEEAKEM 600
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 137/269 (50%), Gaps = 10/269 (3%)
Query: 19 IVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLLNAYVLLSFL-DACILFDE 77
+V L SC S + +T + +H ++K G ++ ++ N +LN Y L DA +F +
Sbjct: 44 LVSALGSCASS-NDVTCGRQIHCRVLKSGL-DSNGYICNSVLNMYAKCRLLADAESVFRD 101
Query: 78 MPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLF 137
++ ++N M+ GY RS + A ++F+ P+R VS +++I Y + + LF
Sbjct: 102 HAKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELF 161
Query: 138 RRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMY 197
R + GI ++VT V+S C+H+G G+ + + +K E + L++MY
Sbjct: 162 REMRNL-GIMLNEVTLATVISACSHLG--GIWDCRMLQSLAIKLKLEGRVFVSTNLLHMY 218
Query: 198 AKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFT 257
L++A +F+ M ERN+++W ++ G ++ G E+A +F+++ + +++
Sbjct: 219 CLCLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQI----TEKDIVSWG 274
Query: 258 GVLSACAHAGLVEEGRRYFKMIEDYGMEP 286
++ C ++E Y+ + GM+P
Sbjct: 275 TMIDGCLRKNQLDEALVYYTEMLRCGMKP 303
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 104/223 (46%), Gaps = 34/223 (15%)
Query: 155 AVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVF---- 210
+ L CA S + G+ +H ++K+G + N + +++NMYAK +L +A VF
Sbjct: 46 SALGSCA--SSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHA 103
Query: 211 ---------------------------ELMVERNVLSWTALICGAAQWGFCEEALVVFEK 243
++M ER+ +S+T LI G AQ EA+ +F +
Sbjct: 104 KLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFRE 163
Query: 244 MRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGR 303
MR G+ NE+T V+SAC+H G + + R + +E +V +L+++
Sbjct: 164 MRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLC 223
Query: 304 LEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQV 346
L++A ++ M E N+V + L+ + E AE + +Q+
Sbjct: 224 LKDARKLFDEMP-ERNLVTWNVMLNGYSKAGLIEQAEELFDQI 265
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 194 bits (494), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 108/378 (28%), Positives = 208/378 (55%), Gaps = 37/378 (9%)
Query: 1 MHLYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLL 60
+ ++S++ + V D +V L + T L L + +HA ++K+G L + LL
Sbjct: 207 LEIFSQMRKMDVKPDWVALVSVLNAFTC-LQDLKQGRSIHASVVKMG-----LEIEPDLL 260
Query: 61 NAYVLLSFLDACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSM 120
++ NTM Y++ G V A+ +F++ + + ++M
Sbjct: 261 -----------------------ISLNTM---YAKCGQVATAKILFDKMKSPNLILWNAM 294
Query: 121 ISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVK 180
IS Y G +++ + +F ++ + ++PD ++ + +S CA +GSL +S++ ++ +
Sbjct: 295 ISGYAKNGYAREAIDMFHE-MINKDVRPDTISITSAISACAQVGSLE--QARSMYEYVGR 351
Query: 181 NGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVV 240
+ + + + + L++M+AK G + A +VF+ ++R+V+ W+A+I G G EA+ +
Sbjct: 352 SDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISL 411
Query: 241 FEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGK 300
+ M GV PN++TF G+L AC H+G+V EG +F + D+ + P+ HYA ++ L+G+
Sbjct: 412 YRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGR 471
Query: 301 SGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPEDDRGIYR 360
+G L++AYE+IK M V+P V V+G+ LSACK+H+ E+ E +Q+ + P + G Y
Sbjct: 472 AGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFS-IDPSNT-GHYV 529
Query: 361 LIHDLYVMGEKWEEAAKL 378
+ +LY W+ A++
Sbjct: 530 QLSNLYAAARLWDRVAEV 547
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 90/327 (27%), Positives = 158/327 (48%), Gaps = 38/327 (11%)
Query: 3 LYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLLNA 62
+YS + V DSF LK+C S L L + + +HA + +LGF
Sbjct: 106 MYSNMQLARVSPDSFTFPHLLKAC-SGLSHLQMGRFVHAQVFRLGF-------------- 150
Query: 63 YVLLSFLDACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFE--EAPQRDSVSLSSM 120
+ + N +I Y++ + AR VFE P+R VS +++
Sbjct: 151 -----------------DADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAI 193
Query: 121 ISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVK 180
+SAY G + L +F ++ + +KPD V +VL+ + L G+S+H +VK
Sbjct: 194 VSAYAQNGEPMEALEIFSQMRKMD-VKPDWVALVSVLNAFTCLQDLK--QGRSIHASVVK 250
Query: 181 NGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVV 240
G E+ +L +L MYAK G + A ++F+ M N++ W A+I G A+ G+ EA+ +
Sbjct: 251 MGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDM 310
Query: 241 FEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGK 300
F +M VRP+ ++ T +SACA G +E+ R ++ + V ++L+ + K
Sbjct: 311 FHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAK 370
Query: 301 SGRLEEAYEIIKTMKVEPNVVVFGSFL 327
G +E A ++ ++ +VVV+ + +
Sbjct: 371 CGSVEGA-RLVFDRTLDRDVVVWSAMI 396
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 132/268 (49%), Gaps = 7/268 (2%)
Query: 89 MIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKP 148
+I S GD+ AR+VF++ P+ +++I Y+ + L ++ + L + P
Sbjct: 59 LIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLAR-VSP 117
Query: 149 DQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAM 208
D T +L C+ + L + G+ VH + + G++ + + L+ +YAK L +A
Sbjct: 118 DSFTFPHLLKACSGLSHLQM--GRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSART 175
Query: 209 VFE--LMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHA 266
VFE + ER ++SWTA++ AQ G EAL +F +MR V+P+ + VL+A
Sbjct: 176 VFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCL 235
Query: 267 GLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSF 326
+++GR + G+E + SL + K G++ A + MK PN++++ +
Sbjct: 236 QDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMK-SPNLILWNAM 294
Query: 327 LSA-CKEHKQFEMAERVIEQVLRMVKPE 353
+S K E + E + + V+P+
Sbjct: 295 ISGYAKNGYAREAIDMFHEMINKDVRPD 322
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 98/211 (46%), Gaps = 8/211 (3%)
Query: 145 GIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLR 204
GI D A +++ H L K +H ++ G + + L L++ + G +
Sbjct: 17 GIHSDSFYA-SLIDSATHKAQL-----KQIHARLLVLGLQFSGFLITKLIHASSSFGDIT 70
Query: 205 NAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACA 264
A VF+ + + W A+I G ++ ++AL+++ M++A V P+ TF +L AC+
Sbjct: 71 FARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACS 130
Query: 265 HAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKV-EPNVVVF 323
++ GR + G + V L+ L K RL A + + + + E +V +
Sbjct: 131 GLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSW 190
Query: 324 GSFLSACKEHKQFEMAERVIEQVLRM-VKPE 353
+ +SA ++ + A + Q+ +M VKP+
Sbjct: 191 TAIVSAYAQNGEPMEALEIFSQMRKMDVKPD 221
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 193 bits (491), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 118/367 (32%), Positives = 197/367 (53%), Gaps = 43/367 (11%)
Query: 17 FCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLLNAYVLLSFLDACILFD 76
F IV LK+C ++ + +H ++K G + HV +L YV + +LFD
Sbjct: 121 FLIVACLKACF-----FSVGKQIHCWVVKNGVFLSDGHVQTGVLRIYV-----EDKLLFD 170
Query: 77 EMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSL 136
AR+VF+E PQ D V +++ Y G +GL +
Sbjct: 171 -------------------------ARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEV 205
Query: 137 FRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGW-ELNAELGATLVN 195
F+ +L+ GI+PD+ + L+ CA +G+L GK +H F+ K W E + +G LV+
Sbjct: 206 FKEMLV-RGIEPDEFSVTTALTACAQVGALA--QGKWIHEFVKKKRWIESDVFVGTALVD 262
Query: 196 MYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKM-RVAGVRPNEL 254
MYAK G + A VFE + RNV SW ALI G A +G+ ++A +++ R G++P+ +
Sbjct: 263 MYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDSV 322
Query: 255 TFTGVLSACAHAGLVEEGRRYFKMIE-DYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKT 313
GVL+ACAH G +EEGR + +E YG+ PK HY+ +V L+ ++GRL++A ++I+
Sbjct: 323 VLLGVLAACAHGGFLEEGRTMLENMEARYGITPKHEHYSCIVDLMCRAGRLDDALDLIEK 382
Query: 314 MKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKP--EDDRGIYRLIHDLYVMGEK 371
M ++P V+G+ L+ C+ HK E+ E ++ +L + K E++ + ++Y ++
Sbjct: 383 MPMKPLASVWGALLNGCRTHKNVELGELAVQNLLDLEKGNVEEEEAALVQLSNIYFSVQR 442
Query: 372 WEEAAKL 378
EA K+
Sbjct: 443 NPEAFKV 449
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 193 bits (491), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 105/297 (35%), Positives = 173/297 (58%), Gaps = 7/297 (2%)
Query: 85 TWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFE 144
T N +I Y + + A VF E ++D VS +SMIS + SK+ + LF +
Sbjct: 241 TGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSS 300
Query: 145 GIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLR 204
GIKPD +VLS CA +G++ G+ VH +I+ G + + +G +V+MYAK G +
Sbjct: 301 GIKPDGHILTSVLSACASLGAVD--HGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIE 358
Query: 205 NAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACA 264
A +F + +NV +W AL+ G A G E+L FE+M G +PN +TF L+AC
Sbjct: 359 TALEIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACC 418
Query: 265 HAGLVEEGRRYFKMIE--DYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVV 322
H GLV+EGRRYF ++ +Y + PK+ HY ++ L+ ++G L+EA E++K M V+P+V +
Sbjct: 419 HTGLVDEGRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMPVKPDVRI 478
Query: 323 FGSFLSACKEHKQF-EMAERVIEQVLRMVKPEDDRGIYRLIHDLYVMGEKWEEAAKL 378
G+ LSACK E+ + +++ L + +D G+Y L+ +++ +W++ A++
Sbjct: 479 CGAILSACKNRGTLMELPKEILDSFLDI--EFEDSGVYVLLSNIFAANRRWDDVARI 533
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 136/268 (50%), Gaps = 9/268 (3%)
Query: 87 NTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGI 146
N+++ Y G+ + A +VF E P RD VS + +I+ + G K+ L F ++ +
Sbjct: 145 NSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKEALDTFSKM----DV 200
Query: 147 KPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNA 206
+P+ T VL +G L L GK +HG I+K ++ E G L++MY K L +A
Sbjct: 201 EPNLATYVCVLVSSGRVGCLSL--GKGIHGLILKRASLISLETGNALIDMYVKCEQLSDA 258
Query: 207 AMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRV-AGVRPNELTFTGVLSACAH 265
VF + +++ +SW ++I G +EA+ +F M+ +G++P+ T VLSACA
Sbjct: 259 MRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACAS 318
Query: 266 AGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGS 325
G V+ GR + I G++ H ++V + K G +E A EI ++ NV + +
Sbjct: 319 LGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFNGIR-SKNVFTWNA 377
Query: 326 FLSACKEHKQFEMAERVIEQVLRM-VKP 352
L H + R E+++++ KP
Sbjct: 378 LLGGLAIHGHGLESLRYFEEMVKLGFKP 405
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 116/262 (44%), Gaps = 16/262 (6%)
Query: 81 RNTVTWNTMIVGYSRSGDVQRAREVFEEAPQR--DSVSLSSMISAYNNIGSSKQGLSLFR 138
R+ + N ++ +S D V + + S S ++++S+Y K +++F
Sbjct: 36 RDDLIINKVVTFLGKSADFASYSSVILHSIRSVLSSFSYNTLLSSYAV--CDKPRVTIFA 93
Query: 139 -RVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMY 197
+ + G PD T V C G+ GK +HG + K G+ + + +LV+ Y
Sbjct: 94 YKTFVSNGFSPDMFTFPPVFKACGKFS--GIREGKQIHGIVTKMGFYDDIYVQNSLVHFY 151
Query: 198 AKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFT 257
G RNA VF M R+V+SWT +I G + G +EAL F KM V PN T+
Sbjct: 152 GVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKEALDTFSKM---DVEPNLATYV 208
Query: 258 GVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAY----EIIKT 313
VL + G + G+ +I + +L+ + K +L +A E+ K
Sbjct: 209 CVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNALIDMYVKCEQLSDAMRVFGELEKK 268
Query: 314 MKVEPNVVVFGSFLSACKEHKQ 335
KV N ++ G L C+ K+
Sbjct: 269 DKVSWNSMISG--LVHCERSKE 288
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 193 bits (490), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 115/377 (30%), Positives = 195/377 (51%), Gaps = 38/377 (10%)
Query: 3 LYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLLNA 62
L +++++ + FDS+ + LK C ++++ L + +H+ ++ G+
Sbjct: 329 LLLQIYQSDLCFDSYTLSGALKICINYVN-LRLGLQVHSLVVVSGYE------------- 374
Query: 63 YVLLSFLDACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMIS 122
L ++ IL D N G++Q A ++F P +D ++ S +I
Sbjct: 375 ---LDYIVGSILVDLHAN---------------VGNIQDAHKLFHRLPNKDIIAFSGLIR 416
Query: 123 AYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNG 182
G + LFR ++ G+ DQ +L C+ + SLG GK +HG +K G
Sbjct: 417 GCVKSGFNSLAFYLFRELIKL-GLDADQFIVSNILKVCSSLASLGW--GKQIHGLCIKKG 473
Query: 183 WELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFE 242
+E LV+MY K G + N ++F+ M+ER+V+SWT +I G Q G EEA F
Sbjct: 474 YESEPVTATALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFH 533
Query: 243 KMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFK-MIEDYGMEPKVHHYASLVYLVGKS 301
KM G+ PN++TF G+LSAC H+GL+EE R + M +YG+EP + HY +V L+G++
Sbjct: 534 KMINIGIEPNKVTFLGLLSACRHSGLLEEARSTLETMKSEYGLEPYLEHYYCVVDLLGQA 593
Query: 302 GRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPEDDRGIYRL 361
G +EA E+I M +EP+ ++ S L+AC HK + + E++L+ DD +Y
Sbjct: 594 GLFQEANELINKMPLEPDKTIWTSLLTACGTHKNAGLVTVIAEKLLKGFP--DDPSVYTS 651
Query: 362 IHDLYVMGEKWEEAAKL 378
+ + Y W++ +K+
Sbjct: 652 LSNAYATLGMWDQLSKV 668
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 84/320 (26%), Positives = 151/320 (47%), Gaps = 17/320 (5%)
Query: 37 QHLHAHIIKLGFAPTHLHVANCLLNAYVLLSFL-DACILFDEMPNRNTVTWNTMIVGYSR 95
+ + AH+IK G + ++ +AN +++ YV L DA +FDEM RN VTW TM+ GY+
Sbjct: 25 ESIQAHVIKQGIS-QNVFIANNVISMYVDFRLLSDAHKVFDEMSERNIVTWTTMVSGYTS 83
Query: 96 SGDVQRAREVF-----EEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQ 150
G +A E++ E + S+++ A +G + G+ ++ R+ E ++ D
Sbjct: 84 DGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIGK-ENLRGDV 142
Query: 151 VTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVF 210
V +V+ G L + A S + + N TL++ Y K G++ A +F
Sbjct: 143 VLMNSVVDMYVKNGRL-IEANSSFKEILRPSSTSWN-----TLISGYCKAGLMDEAVTLF 196
Query: 211 ELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVE 270
M + NV+SW LI G G AL +M+ G+ + L AC+ GL+
Sbjct: 197 HRMPQPNVVSWNCLISGFVDKG-SPRALEFLVRMQREGLVLDGFALPCGLKACSFGGLLT 255
Query: 271 EGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEII--KTMKVEPNVVVFGSFLS 328
G++ + G+E ++L+ + G L A ++ + + V +V V+ S LS
Sbjct: 256 MGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLS 315
Query: 329 ACKEHKQFEMAERVIEQVLR 348
+++ E A ++ Q+ +
Sbjct: 316 GFLINEENEAALWLLLQIYQ 335
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 88/179 (49%), Gaps = 4/179 (2%)
Query: 156 VLSGCAHMGSL-GLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMV 214
+ +G H G + G+S+ ++K G N + +++MY +L +A VF+ M
Sbjct: 8 IAAGLRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMS 67
Query: 215 ERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVR-PNELTFTGVLSACAHAGLVEEGR 273
ERN+++WT ++ G G +A+ ++ +M + NE ++ VL AC G ++ G
Sbjct: 68 ERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGI 127
Query: 274 RYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSA-CK 331
++ I + V S+V + K+GRL EA K + + P+ + + +S CK
Sbjct: 128 LVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEI-LRPSSTSWNTLISGYCK 185
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 122/272 (44%), Gaps = 38/272 (13%)
Query: 2 HLYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLLN 61
+L+ +L + G+ D F + LK C+S L SL + +H IK G+ + A L++
Sbjct: 429 YLFRELIKLGLDADQFIVSNILKVCSS-LASLGWGKQIHGLCIKKGYESEPV-TATALVD 486
Query: 62 AYVLLSFLD-ACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSM 120
YV +D +LFD M R+ V+W +IVG+ ++G V+ A F + M
Sbjct: 487 MYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHK-----------M 535
Query: 121 ISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVK 180
I+ GI+P++VT +LS C H G L A ++ +
Sbjct: 536 INI---------------------GIEPNKVTFLGLLSACRHSGLLE-EARSTLETMKSE 573
Query: 181 NGWELNAELGATLVNMYAKGGVLRNA-AMVFELMVERNVLSWTALICGAAQWGFCEEALV 239
G E E +V++ + G+ + A ++ ++ +E + WT+L+ V
Sbjct: 574 YGLEPYLEHYYCVVDLLGQAGLFQEANELINKMPLEPDKTIWTSLLTACGTHKNAGLVTV 633
Query: 240 VFEKMRVAGVRPNELTFTGVLSACAHAGLVEE 271
+ EK+ + G + +T + +A A G+ ++
Sbjct: 634 IAEKL-LKGFPDDPSVYTSLSNAYATLGMWDQ 664
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 192 bits (489), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 114/377 (30%), Positives = 200/377 (53%), Gaps = 38/377 (10%)
Query: 1 MHLYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLL 60
+ L+ K+ G+ DS + SC SH+ ++ + + LH +++K T + V N L+
Sbjct: 418 IELFRKIQNLGIEIDSASATSVISSC-SHIGAVLLGKSLHCYVVKTSLDLT-ISVVNSLI 475
Query: 61 NAYVLLSFLDACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSM 120
+ Y + GD+ A +F EA + ++ ++M
Sbjct: 476 DLY------------------------------GKMGDLTVAWRMFCEA-DTNVITWNAM 504
Query: 121 ISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVK 180
I++Y + S++ ++LF R ++ E KP +T +L C + GSL G+ +H +I +
Sbjct: 505 IASYVHCEQSEKAIALFDR-MVSENFKPSSITLVTLLMACVNTGSLE--RGQMIHRYITE 561
Query: 181 NGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVV 240
E+N L A L++MYAK G L + +F+ +++ + W +I G G E A+ +
Sbjct: 562 TEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVESAIAL 621
Query: 241 FEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGK 300
F++M + V+P TF +LSAC HAGLVE+G++ F + Y ++P + HY+ LV L+ +
Sbjct: 622 FDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLFLKMHQYDVKPNLKHYSCLVDLLSR 681
Query: 301 SGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPEDDRGIYR 360
SG LEEA + +M P+ V++G+ LS+C H +FEM R+ E+ + P++D G Y
Sbjct: 682 SGNLEEAESTVMSMPFSPDGVIWGTLLSSCMTHGEFEMGIRMAERAV-ASDPQND-GYYI 739
Query: 361 LIHDLYVMGEKWEEAAK 377
++ ++Y KWEEA +
Sbjct: 740 MLANMYSAAGKWEEAER 756
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 76/233 (32%), Positives = 115/233 (49%), Gaps = 7/233 (3%)
Query: 80 NRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRR 139
+ N + +I Y+ G + VF +RD +S+I A+ + G + L F
Sbjct: 56 SENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDYARSLCFFFS 115
Query: 140 VLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNG-WELNAELGATLVNMYA 198
+LL G PD TA V+S CA + L G VHG ++K+G ++ N +GA+ V Y+
Sbjct: 116 MLL-SGQSPDHFTAPMVVSACAEL--LWFHVGTFVHGLVLKHGGFDRNTAVGASFVYFYS 172
Query: 199 KGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGV---RPNELT 255
K G L++A +VF+ M +R+V++WTA+I G Q G E L KM AG +PN T
Sbjct: 173 KCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRT 232
Query: 256 FTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAY 308
AC++ G ++EGR G+ +S+ KSG EAY
Sbjct: 233 LECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAY 285
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 106/198 (53%), Gaps = 4/198 (2%)
Query: 80 NRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRR 139
+RNT + + YS+ G +Q A VF+E P RD V+ +++IS + G S+ GL +
Sbjct: 158 DRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCK 217
Query: 140 V--LLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMY 197
+ + KP+ T C+++G+L G+ +HGF VKNG + + +++ + Y
Sbjct: 218 MHSAGSDVDKPNPRTLECGFQACSNLGALK--EGRCLHGFAVKNGLASSKFVQSSMFSFY 275
Query: 198 AKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFT 257
+K G A + F + + ++ SWT++I A+ G EE+ +F +M+ G+ P+ + +
Sbjct: 276 SKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVIS 335
Query: 258 GVLSACAHAGLVEEGRRY 275
+++ LV +G+ +
Sbjct: 336 CLINELGKMMLVPQGKAF 353
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 133/266 (50%), Gaps = 11/266 (4%)
Query: 87 NTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGI 146
++M YS+SG+ A F E D S +S+I++ G ++ +F + +G+
Sbjct: 269 SSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWE-MQNKGM 327
Query: 147 KPDQVTAGAVLSGCAHMGSLGLLA-GKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRN 205
PD V +++ +G + L+ GK+ HGF++++ + L++ + +L++MY K +L
Sbjct: 328 HPDGVVISCLIN---ELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSV 384
Query: 206 AAMVF-ELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACA 264
A +F + E N +W ++ G + + + +F K++ G+ + + T V+S+C+
Sbjct: 385 AEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCS 444
Query: 265 HAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFG 324
H G V G+ + ++ + SL+ L GK G L A+ + + + NV+ +
Sbjct: 445 HIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMF--CEADTNVITWN 502
Query: 325 SFLSACKEHKQFEMAERVIEQVLRMV 350
+ +++ + E +E+ I RMV
Sbjct: 503 AMIAS---YVHCEQSEKAIALFDRMV 525
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 76/170 (44%), Gaps = 10/170 (5%)
Query: 165 SLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTAL 224
SL L + + + I+ G N + + L++ YA G ++ VF L+ R++ W ++
Sbjct: 37 SLSLESLRKHNALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSI 96
Query: 225 ICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACA-----HAGLVEEGRRYFKMI 279
I G +L F M ++G P+ T V+SACA H G G ++
Sbjct: 97 IKAHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGL----VL 152
Query: 280 EDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSA 329
+ G + AS VY K G L++A + M + +VV + + +S
Sbjct: 153 KHGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMP-DRDVVAWTAIISG 201
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 192 bits (488), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 102/287 (35%), Positives = 168/287 (58%), Gaps = 6/287 (2%)
Query: 93 YSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVT 152
YS+ +++ AR++F+E+P++ S ++MIS Y G ++ +SLFR + E P+ VT
Sbjct: 364 YSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSE-FSPNPVT 422
Query: 153 AGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFEL 212
+LS CA +G+L L GK VH + +E + + L+ MYAK G + A +F+L
Sbjct: 423 ITCILSACAQLGALSL--GKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDL 480
Query: 213 MVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEG 272
M ++N ++W +I G G +EAL +F +M +G+ P +TF VL AC+HAGLV+EG
Sbjct: 481 MTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEG 540
Query: 273 RRYFK-MIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSACK 331
F MI YG EP V HYA +V ++G++G L+ A + I+ M +EP V+ + L AC+
Sbjct: 541 DEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACR 600
Query: 332 EHKQFEMAERVIEQVLRMVKPEDDRGIYRLIHDLYVMGEKWEEAAKL 378
HK +A V E++ + D+ G + L+ +++ + +AA +
Sbjct: 601 IHKDTNLARTVSEKLFEL--DPDNVGYHVLLSNIHSADRNYPQAATV 645
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 130/255 (50%), Gaps = 7/255 (2%)
Query: 93 YSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVT 152
YS+ G ++ +F E + D V+ ++MI Y + G ++ LSLF+ ++L G + T
Sbjct: 266 YSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELML-SGARLRSST 324
Query: 153 AGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFEL 212
+++ H L+ ++HG+ +K+ + +A + L +Y+K + +A +F+
Sbjct: 325 LVSLVPVSGH-----LMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDE 379
Query: 213 MVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEG 272
E+++ SW A+I G Q G E+A+ +F +M+ + PN +T T +LSACA G + G
Sbjct: 380 SPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLG 439
Query: 273 RRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKE 332
+ ++ E ++ +L+ + K G + EA + M + N V + + +S
Sbjct: 440 KWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLM-TKKNEVTWNTMISGYGL 498
Query: 333 HKQFEMAERVIEQVL 347
H Q + A + ++L
Sbjct: 499 HGQGQEALNIFYEML 513
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/269 (20%), Positives = 113/269 (42%), Gaps = 41/269 (15%)
Query: 99 VQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLS 158
V+ AR+VF+ P++D++ ++MIS Y + + +FR ++ + D T +L
Sbjct: 170 VEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILP 229
Query: 159 GCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNV 218
A + L L G +H K G + + +++Y+K G ++ + +F + ++
Sbjct: 230 AVAELQELRL--GMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDI 287
Query: 219 LSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGL---------- 268
+++ A+I G G E +L +F+++ ++G R T ++ H L
Sbjct: 288 VAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIYAIHGYCLK 347
Query: 269 ----------------------VEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEE 306
+E R+ F D E + + +++ ++G E+
Sbjct: 348 SNFLSHASVSTALTTVYSKLNEIESARKLF----DESPEKSLPSWNAMISGYTQNGLTED 403
Query: 307 AYEIIKTMK---VEPNVVVFGSFLSACKE 332
A + + M+ PN V LSAC +
Sbjct: 404 AISLFREMQKSEFSPNPVTITCILSACAQ 432
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/269 (20%), Positives = 118/269 (43%), Gaps = 5/269 (1%)
Query: 81 RNTVTWNTMIVG-YSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRR 139
RN ++ T + S G + AR++F + D + ++ ++ S LS+F
Sbjct: 49 RNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAH 108
Query: 140 VLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAK 199
+ +KP+ T +S + G AG+ +HG V +G + LG+ +V MY K
Sbjct: 109 LRKSTDLKPNSSTYAFAISAAS--GFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFK 166
Query: 200 GGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKM-RVAGVRPNELTFTG 258
+ +A VF+ M E++ + W +I G + E++ VF + + R + T
Sbjct: 167 FWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLD 226
Query: 259 VLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEP 318
+L A A + G + + G + + L K G+++ + + + +P
Sbjct: 227 ILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFR-KP 285
Query: 319 NVVVFGSFLSACKEHKQFEMAERVIEQVL 347
++V + + + + + E++ + ++++
Sbjct: 286 DIVAYNAMIHGYTSNGETELSLSLFKELM 314
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 95/227 (41%), Gaps = 37/227 (16%)
Query: 1 MHLYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLL 60
+ L+ ++ ++ + I L +C + L +L++ + +H + F + ++V+ L+
Sbjct: 405 ISLFREMQKSEFSPNPVTITCILSAC-AQLGALSLGKWVHDLVRSTDFESS-IYVSTALI 462
Query: 61 NAYVLL-SFLDACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSS 119
Y S +A LFD M +N VTWNTMI GY G Q A +F E
Sbjct: 463 GMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYE----------- 511
Query: 120 MISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIV 179
+L GI P VT VL C+H G L + + I
Sbjct: 512 ---------------------MLNSGITPTPVTFLCVLYACSHAG-LVKEGDEIFNSMIH 549
Query: 180 KNGWELNAELGATLVNMYAKGGVLRNAAMVFELM-VERNVLSWTALI 225
+ G+E + + A +V++ + G L+ A E M +E W L+
Sbjct: 550 RYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLL 596
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 192 bits (487), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 115/381 (30%), Positives = 210/381 (55%), Gaps = 40/381 (10%)
Query: 1 MHLYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLL 60
+ +Y + R+ V D + + +K+ +H T+ + LH+ ++LGF
Sbjct: 102 IQVYLGMVRSTVLPDRYSLPIVIKAAV-QIHDFTLGKELHSVAVRLGFVG---------- 150
Query: 61 NAYVLLSFLDACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSM 120
DE +T Y ++G+ + AR+VF+E P+R S +++
Sbjct: 151 ---------------DEFCESGFITL------YCKAGEFENARKVFDENPERKLGSWNAI 189
Query: 121 ISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVK 180
I N+ G + + + +F + G++PD T +V + C +G L L +H +++
Sbjct: 190 IGGLNHAGRANEAVEMFVD-MKRSGLEPDDFTMVSVTASCGGLGDLSL--AFQLHKCVLQ 246
Query: 181 NGWELNAELGA--TLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEAL 238
E +++ +L++MY K G + A+ +FE M +RNV+SW+++I G A G EAL
Sbjct: 247 AKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEAL 306
Query: 239 VVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIE-DYGMEPKVHHYASLVYL 297
F +MR GVRPN++TF GVLSAC H GLVEEG+ YF M++ ++ +EP + HY +V L
Sbjct: 307 ECFRQMREFGVRPNKITFVGVLSACVHGGLVEEGKTYFAMMKSEFELEPGLSHYGCIVDL 366
Query: 298 VGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPEDDRG 357
+ + G+L+EA ++++ M ++PNV+V+G + C++ EMAE V ++ + +P +D G
Sbjct: 367 LSRDGQLKEAKKVVEEMPMKPNVMVWGCLMGGCEKFGDVEMAEWVAPYMVEL-EPWND-G 424
Query: 358 IYRLIHDLYVMGEKWEEAAKL 378
+Y ++ ++Y + W++ ++
Sbjct: 425 VYVVLANVYALRGMWKDVERV 445
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 192 bits (487), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 103/325 (31%), Positives = 193/325 (59%), Gaps = 7/325 (2%)
Query: 57 NCLLNAYVLL-SFLDACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSV 115
N +++ Y+ + + L+A LFD+MP R+ ++WNT++ GY+ GD++ VF++ P+R+
Sbjct: 94 NTMISGYIEMGNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVFDDMPERNVF 153
Query: 116 SLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVH 175
S + +I Y G + L F+R++ + P+ T VLS CA +G+ GK VH
Sbjct: 154 SWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDF--GKWVH 211
Query: 176 GFIVKNGW-ELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFC 234
+ G+ +++ + L++MY K G + A VF+ + R+++SW +I G A G
Sbjct: 212 KYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHG 271
Query: 235 EEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFK-MIEDYGMEPKVHHYAS 293
EAL +F +M+ +G+ P+++TF GVL AC H GLVE+G YF M D+ + P++ H
Sbjct: 272 TEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGC 331
Query: 294 LVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPE 353
+V L+ ++G L +A E I M V+ + V++ + L A K +K+ ++ E +E+++++ +P
Sbjct: 332 VVDLLSRAGFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVDIGEVALEELIKL-EPR 390
Query: 354 DDRGIYRLIHDLYVMGEKWEEAAKL 378
+ + ++ ++Y ++++AA+L
Sbjct: 391 NPAN-FVMLSNIYGDAGRFDDAARL 414
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 71/224 (31%), Positives = 106/224 (47%), Gaps = 19/224 (8%)
Query: 97 GDVQRAREVFEEAPQRDSVSLSSMISAY---NNIGSSKQGLSLFRRVLLFEGIKPDQVTA 153
G + A +VF E +++ V +SMI+ Y ++ S+++ L + D V
Sbjct: 42 GVIASANKVFCEMVEKNVVLWTSMINGYLLNKDLVSARRYFDL--------SPERDIVLW 93
Query: 154 GAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELM 213
++SG MG++ L A ++ N T++ YA G + VF+ M
Sbjct: 94 NTMISGYIEMGNM-LEARSLFDQMPCRDVMSWN-----TVLEGYANIGDMEACERVFDDM 147
Query: 214 VERNVLSWTALICGAAQWGFCEEALVVFEKMRVAG-VRPNELTFTGVLSACAHAGLVEEG 272
ERNV SW LI G AQ G E L F++M G V PN+ T T VLSACA G + G
Sbjct: 148 PERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFG 207
Query: 273 RRYFKMIEDYGMEP-KVHHYASLVYLVGKSGRLEEAYEIIKTMK 315
+ K E G V+ +L+ + GK G +E A E+ K +K
Sbjct: 208 KWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIK 251
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 192 bits (487), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 106/326 (32%), Positives = 192/326 (58%), Gaps = 8/326 (2%)
Query: 57 NCLLNAYVLLSFLD-ACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSV 115
N ++ Y + +D A LF MP R+ +WNTMI G+ R+ ++ +A +F+ P+++ +
Sbjct: 237 NAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNKACGLFDRMPEKNVI 296
Query: 116 SLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVH 175
S ++MI+ Y +++ L++F ++L +KP+ T ++LS C+ + GL+ G+ +H
Sbjct: 297 SWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLA--GLVEGQQIH 354
Query: 176 GFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFE--LMVERNVLSWTALICGAAQWGF 233
I K+ + N + + L+NMY+K G L A +F+ L+ +R+++SW ++I A G
Sbjct: 355 QLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGH 414
Query: 234 CEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFK-MIEDYGMEPKVHHYA 292
+EA+ ++ +MR G +P+ +T+ +L AC+HAGLVE+G +FK ++ D + + HY
Sbjct: 415 GKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLREEHYT 474
Query: 293 SLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKP 352
LV L G++GRL++ I + +G+ LSAC H + +A+ V+++VL
Sbjct: 475 CLVDLCGRAGRLKDVTNFINCDDARLSRSFYGAILSACNVHNEVSIAKEVVKKVLET--G 532
Query: 353 EDDRGIYRLIHDLYVMGEKWEEAAKL 378
DD G Y L+ ++Y K EEAA++
Sbjct: 533 SDDAGTYVLMSNIYAANGKREEAAEM 558
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/261 (31%), Positives = 133/261 (50%), Gaps = 33/261 (12%)
Query: 71 ACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSS 130
A +LF EMP RN V+WNTMI GY++SG + +A E+F+E P+R+ VS +SM+ A G
Sbjct: 128 AEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVKALVQRGRI 187
Query: 131 KQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLG--------------LLAGKSVHG 176
+ ++LF R+ + D V+ A++ G A G + + + G
Sbjct: 188 DEAMNLFERM-----PRRDVVSWTAMVDGLAKNGKVDEARRLFDCMPERNIISWNAMITG 242
Query: 177 FIVKNGWELNAEL-----------GATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALI 225
+ N + +L T++ + + + A +F+ M E+NV+SWT +I
Sbjct: 243 YAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNKACGLFDRMPEKNVISWTTMI 302
Query: 226 CGAAQWGFCEEALVVFEKM-RVAGVRPNELTFTGVLSACAH-AGLVEEGRRYFKMIEDYG 283
G + EEAL VF KM R V+PN T+ +LSAC+ AGLV EG++ ++I
Sbjct: 303 TGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLV-EGQQIHQLISKSV 361
Query: 284 MEPKVHHYASLVYLVGKSGRL 304
+ ++L+ + KSG L
Sbjct: 362 HQKNEIVTSALLNMYSKSGEL 382
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 142/316 (44%), Gaps = 83/316 (26%)
Query: 70 DACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDS-VSLSSMISAYNNIG 128
+A LFD +P R+ VTW +I GY + GD++ ARE+F+ R + V+ ++M+S Y
Sbjct: 64 EARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDSRKNVVTWTAMVSGY---L 120
Query: 129 SSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAE 188
SKQ LS+ +LF+ + V + W
Sbjct: 121 RSKQ-LSIAE--MLFQEMPERNVVS-----------------------------WN---- 144
Query: 189 LGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAG 248
T+++ YA+ G + A +F+ M ERN++SW +++ Q G +EA+ +FE+M
Sbjct: 145 ---TMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERM---- 197
Query: 249 VRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAY 308
R + +++T ++ A G V+E RR F D E + + +++ ++ R++EA
Sbjct: 198 PRRDVVSWTAMVDGLAKNGKVDEARRLF----DCMPERNIISWNAMITGYAQNNRIDEAD 253
Query: 309 EIIKTMK------------------------------VEPNVVVFGSFLSACKEHKQFEM 338
++ + M E NV+ + + ++ E+K+ E
Sbjct: 254 QLFQVMPERDFASWNTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEE 313
Query: 339 AERVIEQVLR--MVKP 352
A V ++LR VKP
Sbjct: 314 ALNVFSKMLRDGSVKP 329
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 78/156 (50%), Gaps = 8/156 (5%)
Query: 193 LVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPN 252
L+ K G + A +F+ + ER+V++WT +I G + G EA +F+++ R N
Sbjct: 52 LIGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRV---DSRKN 108
Query: 253 ELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIK 312
+T+T ++S + + F+ + E V + +++ +SGR+++A E+
Sbjct: 109 VVTWTAMVSGYLRSKQLSIAEMLFQEMP----ERNVVSWNTMIDGYAQSGRIDKALELFD 164
Query: 313 TMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLR 348
M E N+V + S + A + + + A + E++ R
Sbjct: 165 EMP-ERNIVSWNSMVKALVQRGRIDEAMNLFERMPR 199
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 191 bits (486), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 116/367 (31%), Positives = 197/367 (53%), Gaps = 43/367 (11%)
Query: 17 FCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLLNAYVLLSFLDACILFD 76
F IV LK+C ++ + +H ++K G + HV +L YV + +L D
Sbjct: 121 FLIVACLKACF-----FSVGKQIHCWVVKNGVFLSDSHVQTGVLRIYV-----EDKLLLD 170
Query: 77 EMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSL 136
AR+VF+E PQ D V +++ Y G +GL +
Sbjct: 171 -------------------------ARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEV 205
Query: 137 FRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGW-ELNAELGATLVN 195
FR +L+ +G++PD+ + L+ CA +G+L GK +H F+ K W E + +G LV+
Sbjct: 206 FREMLV-KGLEPDEFSVTTALTACAQVGALA--QGKWIHEFVKKKSWIESDVFVGTALVD 262
Query: 196 MYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKM-RVAGVRPNEL 254
MYAK G + A VF+ + RNV SW ALI G A +G+ ++A+ E++ R G++P+ +
Sbjct: 263 MYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKAMTCLERLEREDGIKPDSV 322
Query: 255 TFTGVLSACAHAGLVEEGRRYFKMIE-DYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKT 313
GVL+ACAH G +EEGR + +E Y + PK HY+ +V L+ ++GRL++A +I+
Sbjct: 323 VLLGVLAACAHGGFLEEGRSMLENMEARYEITPKHEHYSCIVDLMCRAGRLDDALNLIEK 382
Query: 314 MKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVK--PEDDRGIYRLIHDLYVMGEK 371
M ++P V+G+ L+ C+ HK E+ E ++ +L + K E++ + ++Y ++
Sbjct: 383 MPMKPLASVWGALLNGCRTHKNVELGELAVKNLLDLEKGNVEEEEAALVQLSNIYFSVQR 442
Query: 372 WEEAAKL 378
EA+K+
Sbjct: 443 NPEASKV 449
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 142/328 (43%), Gaps = 43/328 (13%)
Query: 31 HSLTIIQHLHAHIIKLG-FAPTHLHVANCLLNAYVLLSFLDACILFDEMPNRNTVTWNTM 89
HSL II LH + + LH+ N LN + F A +FD + N+ ++TM
Sbjct: 31 HSLFIIHGLHRNTYAISKLLTAFLHLPN--LNKH----FHYASSIFDSIEIPNSFVYDTM 84
Query: 90 IVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPD 149
I SRS F + + E I P
Sbjct: 85 IRICSRSSQPHLGLRYFLLMVKEEE-----------------------------EDIAPS 115
Query: 150 QVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWEL-NAELGATLVNMYAKGGVLRNAAM 208
+T ++ C + + GK +H ++VKNG L ++ + ++ +Y + +L +A
Sbjct: 116 YLTFHFLIVAC--LKACFFSVGKQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARK 173
Query: 209 VFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGL 268
VF+ + + +V+ W L+ G + G E L VF +M V G+ P+E + T L+ACA G
Sbjct: 174 VFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGA 233
Query: 269 VEEGRRYFKMIEDYG-MEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFL 327
+ +G+ + ++ +E V +LV + K G +E A E+ K + NV + + +
Sbjct: 234 LAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKL-TRRNVFSWAALI 292
Query: 328 SACKEHKQFEMAERVIEQVLRM--VKPE 353
+ + A +E++ R +KP+
Sbjct: 293 GGYAAYGYAKKAMTCLERLEREDGIKPD 320
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 191 bits (486), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 121/375 (32%), Positives = 203/375 (54%), Gaps = 48/375 (12%)
Query: 15 DSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLLNAYVLLSFLDACIL 74
DSF ++F +K ++ S + +HA + KLGF NA + +
Sbjct: 63 DSFSVLFAIKVSSAQKASSLDGRQIHALVRKLGF------------NAVIQI-------- 102
Query: 75 FDEMPNRNTVTWNTMIVG-YSRSGDVQRAREVFEEAPQRDSVSL-SSMISAYNNIGSSKQ 132
T +VG YS GDV AR+VF+E P++ ++ L ++MISAY +S +
Sbjct: 103 ------------QTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVE 150
Query: 133 GLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELG-- 190
+ LF+R + E I+ D V LS CA +G++ + G+ ++ +K L +L
Sbjct: 151 AIELFKR-MEAEKIELDGVIVTVALSACADLGAVQM--GEEIYSRSIKRKRRLAMDLTLR 207
Query: 191 ATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAG-- 248
+L+NMY K G A +F+ + ++V ++T++I G A G +E+L +F+KM+
Sbjct: 208 NSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQS 267
Query: 249 ----VRPNELTFTGVLSACAHAGLVEEGRRYFK-MIEDYGMEPKVHHYASLVYLVGKSGR 303
+ PN++TF GVL AC+H+GLVEEG+R+FK MI DY ++P+ H+ +V L +SG
Sbjct: 268 QDTVITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGH 327
Query: 304 LEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPEDDRGIYRLIH 363
L++A+E I M ++PN V++ + L AC H E+ E V ++ + + D G Y +
Sbjct: 328 LKDAHEFINQMPIKPNTVIWRTLLGACSLHGNVELGEEVQRRIFELDR--DHVGDYVALS 385
Query: 364 DLYVMGEKWEEAAKL 378
++Y W+E +K+
Sbjct: 386 NIYASKGMWDEKSKM 400
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/238 (21%), Positives = 99/238 (41%), Gaps = 31/238 (13%)
Query: 1 MHLYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFA-PTHLHVANCL 59
+ L+ ++ + D + L +C + L ++ + + +++ IK L + N L
Sbjct: 152 IELFKRMEAEKIELDGVIVTVALSAC-ADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSL 210
Query: 60 LNAYVLLSFLD-ACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLS 118
LN YV + A LFDE ++ T+ +MI GY+ +G Q + E+F++
Sbjct: 211 LNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKK---------- 260
Query: 119 SMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFI 178
I S+ + I P+ VT VL C+H G L + I
Sbjct: 261 -----MKTIDQSQDTV-----------ITPNDVTFIGVLMACSHSG-LVEEGKRHFKSMI 303
Query: 179 VKNGWELNAELGATLVNMYAKGGVLRNA-AMVFELMVERNVLSWTALICGAAQWGFCE 235
+ + +V+++ + G L++A + ++ ++ N + W L+ + G E
Sbjct: 304 MDYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQMPIKPNTVIWRTLLGACSLHGNVE 361
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 191 bits (485), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 123/380 (32%), Positives = 196/380 (51%), Gaps = 42/380 (11%)
Query: 3 LYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLLNA 62
LY K+ GV D F F +K+ S L + LHAH++K GF CL
Sbjct: 96 LYKKMRDLGVRPDEFTYPFVVKA-ISQLGDFSCGFALHAHVVKYGFG--------CL--- 143
Query: 63 YVLLSFLDACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMIS 122
+ +++ Y + G++ A +FE +D V+ ++ ++
Sbjct: 144 --------------------GIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLA 183
Query: 123 AYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNG 182
G+S L F + + + ++ D T ++LS C +GSL + G+ ++ K
Sbjct: 184 VCVQTGNSAIALEYFNK-MCADAVQFDSFTVVSMLSACGQLGSLEI--GEEIYDRARKEE 240
Query: 183 WELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFE 242
+ N + ++M+ K G A ++FE M +RNV+SW+ +I G A G EAL +F
Sbjct: 241 IDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFT 300
Query: 243 KMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMI---EDYGMEPKVHHYASLVYLVG 299
M+ G+RPN +TF GVLSAC+HAGLV EG+RYF ++ D +EP+ HYA +V L+G
Sbjct: 301 TMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLG 360
Query: 300 KSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPEDDRGIY 359
+SG LEEAYE IK M VEP+ ++G+ L AC H+ + ++V + +V+ D G Y
Sbjct: 361 RSGLLEEAYEFIKKMPVEPDTGIWGALLGACAVHRDMILGQKVADV---LVETAPDIGSY 417
Query: 360 R-LIHDLYVMGEKWEEAAKL 378
L+ ++Y KW+ K+
Sbjct: 418 HVLLSNIYAAAGKWDCVDKV 437
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/329 (23%), Positives = 133/329 (40%), Gaps = 68/329 (20%)
Query: 36 IQHLHAHIIKLGFAPTHLHVANCLLNAYVLLSFLDACILFDEMPNRNTVTWNTMIVGYSR 95
++ +HA +++ GF+ + + L N V+ A +FDEM WNT+ GY
Sbjct: 27 LKKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYV- 85
Query: 96 SGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGA 155
R+ + S++ L++++ G++PD+ T
Sbjct: 86 ----------------RNQLPFESLL--------------LYKKMRDL-GVRPDEFTYPF 114
Query: 156 VLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVE 215
V+ + +G G ++H +VK G+ + LV MY K G L +A +FE M
Sbjct: 115 VVKAISQLGDFS--CGFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQV 172
Query: 216 RNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRY 275
+++++W A + Q G AL F KM V+ + T +LSAC G +E G
Sbjct: 173 KDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEI 232
Query: 276 FK-----------MIEDYGM--------------------EPKVHHYASLVYLVGKSGRL 304
+ ++E+ + + V +++++ +G
Sbjct: 233 YDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDS 292
Query: 305 EEAYEIIKTMKVE---PNVVVFGSFLSAC 330
EA + TM+ E PN V F LSAC
Sbjct: 293 REALTLFTTMQNEGLRPNYVTFLGVLSAC 321
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 108/234 (46%), Gaps = 41/234 (17%)
Query: 1 MHLYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLL 60
+ ++K+ V FDSF +V L +C L SL I + ++ K ++ V N L
Sbjct: 195 LEYFNKMCADAVQFDSFTVVSMLSAC-GQLGSLEIGEEIYDRARKEEI-DCNIIVENARL 252
Query: 61 NAYVLLSFLDAC-ILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSS 119
+ ++ +A +LF+EM RN V+W+TMIVGY+ +GD
Sbjct: 253 DMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGD--------------------- 291
Query: 120 MISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIV 179
S++ L+LF + EG++P+ VT VLS C+H G + GK +V
Sbjct: 292 ----------SREALTLF-TTMQNEGLRPNYVTFLGVLSACSHAGLVN--EGKRYFSLMV 338
Query: 180 KN---GWELNAELGATLVNMYAKGGVLRNA-AMVFELMVERNVLSWTALICGAA 229
++ E E A +V++ + G+L A + ++ VE + W AL+ A
Sbjct: 339 QSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGALLGACA 392
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 190 bits (482), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 112/344 (32%), Positives = 189/344 (54%), Gaps = 39/344 (11%)
Query: 37 QHLHAHIIKLGFAPTHLHVANCLLNAYVLLSFLDACI-LFDEMPNRNTVTWNTMIVGYSR 95
+ LH ++K+GF ++V+N L++ Y +D + LF E+ ++N V+WNT+IVGY
Sbjct: 368 EQLHGLVVKVGF-DLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYEN 426
Query: 96 SGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGA 155
G+ +A +F EA R+ VS++ +VT +
Sbjct: 427 LGEGGKAFSMFREA-LRNQVSVT-------------------------------EVTFSS 454
Query: 156 VLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVE 215
L CA + S+ L G VHG +K + +L++MYAK G ++ A VF M
Sbjct: 455 ALGACASLASMDL--GVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMET 512
Query: 216 RNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRY 275
+V SW ALI G + G +AL + + M+ +PN LTF GVLS C++AGL+++G+
Sbjct: 513 IDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQEC 572
Query: 276 FK-MIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHK 334
F+ MI D+G+EP + HY +V L+G+SG+L++A ++I+ + EP+V+++ + LSA
Sbjct: 573 FESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQN 632
Query: 335 QFEMAERVIEQVLRMVKPEDDRGIYRLIHDLYVMGEKWEEAAKL 378
E A R E++L+ + P+D+ Y L+ ++Y ++W A +
Sbjct: 633 NEEFARRSAEEILK-INPKDE-ATYVLVSNMYAGAKQWANVASI 674
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 143/326 (43%), Gaps = 39/326 (11%)
Query: 3 LYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLLNA 62
LYS+LHR G + LK S L I LH+ I+KLG+ NA
Sbjct: 133 LYSRLHREGHELNPHVFTSFLKLFVS-LDKAEICPWLHSPIVKLGYDS----------NA 181
Query: 63 YVLLSFLDACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMIS 122
+V + ++A YS G V AR VFE +D V + ++S
Sbjct: 182 FVGAALINA---------------------YSVCGSVDSARTVFEGILCKDIVVWAGIVS 220
Query: 123 AYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNG 182
Y G + L L + G P+ T L +G+ K VHG I+K
Sbjct: 221 CYVENGYFEDSLKLLS-CMRMAGFMPNNYTFDTALKASIGLGAFDF--AKGVHGQILKTC 277
Query: 183 WELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFE 242
+ L+ +G L+ +Y + G + +A VF M + +V+ W+ +I Q GFC EA+ +F
Sbjct: 278 YVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFI 337
Query: 243 KMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSG 302
+MR A V PNE T + +L+ CA G + ++ G + ++ +L+ + K
Sbjct: 338 RMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCE 397
Query: 303 RLEEAYEIIKTM----KVEPNVVVFG 324
+++ A ++ + +V N V+ G
Sbjct: 398 KMDTAVKLFAELSSKNEVSWNTVIVG 423
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 122/252 (48%), Gaps = 4/252 (1%)
Query: 93 YSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVT 152
Y++ GD+ A +VF E P+ D V S MI+ + G + + LF R + + P++ T
Sbjct: 292 YTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIR-MREAFVVPNEFT 350
Query: 153 AGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFEL 212
++L+GCA GL G+ +HG +VK G++L+ + L+++YAK + A +F
Sbjct: 351 LSSILNGCAIGKCSGL--GEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAE 408
Query: 213 MVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEG 272
+ +N +SW +I G G +A +F + V E+TF+ L ACA ++ G
Sbjct: 409 LSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLG 468
Query: 273 RRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKE 332
+ + KV SL+ + K G ++ A + M+ +V + + +S
Sbjct: 469 VQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMET-IDVASWNALISGYST 527
Query: 333 HKQFEMAERVIE 344
H A R+++
Sbjct: 528 HGLGRQALRILD 539
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 120/247 (48%), Gaps = 17/247 (6%)
Query: 87 NTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEG- 145
N ++ Y ++G + A +F+E P+R++VS ++ Y + + + L+ R L EG
Sbjct: 88 NILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGY----ACQDPIGLYSR-LHREGH 142
Query: 146 -IKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLR 204
+ P T+ L + +H IVK G++ NA +GA L+N Y+ G +
Sbjct: 143 ELNPHVFTSFLKLFVSLDKAEI----CPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVD 198
Query: 205 NAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACA 264
+A VFE ++ ++++ W ++ + G+ E++L + MR+AG PN TF L A
Sbjct: 199 SARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASI 258
Query: 265 HAGLVEEGRRYFKMIED--YGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVV 322
G + + I Y ++P+V L+ L + G + +A+++ M N VV
Sbjct: 259 GLGAFDFAKGVHGQILKTCYVLDPRVG--VGLLQLYTQLGDMSDAFKVFNEMP--KNDVV 314
Query: 323 FGSFLSA 329
SF+ A
Sbjct: 315 PWSFMIA 321
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 189 bits (481), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 121/367 (32%), Positives = 200/367 (54%), Gaps = 27/367 (7%)
Query: 23 LKSCTSHLHSLTIIQHLHAHIIKLGFA--PTHL--------HVANCLLNAYVLLSFLDAC 72
L+SC + +S ++Q HA I KLG+ P+ L L +LL FL
Sbjct: 37 LESCKAPSNSKCVLQ-AHAQIFKLGYGTYPSLLVSTVAAYRRCNRSYLARRLLLWFLS-- 93
Query: 73 ILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQ 132
L + N N + + M +G S A++V A ++ ++ + MI Y ++
Sbjct: 94 -LSPGVCNINLIIESLMKIGES-----GLAKKVLRNASDQNVITWNLMIGGYVRNVQYEE 147
Query: 133 GLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGAT 192
L + +L F IKP++ + + L+ CA +G L K VH ++ +G ELNA L +
Sbjct: 148 ALKALKNMLSFTDIKPNKFSFASSLAACARLGDLH--HAKWVHSLMIDSGIELNAILSSA 205
Query: 193 LVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPN 252
LV++YAK G + + VF + +V W A+I G A G EA+ VF +M V P+
Sbjct: 206 LVDVYAKCGDIGTSREVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPD 265
Query: 253 ELTFTGVLSACAHAGLVEEGRRYFK-MIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEII 311
+TF G+L+ C+H GL+EEG+ YF M + ++PK+ HY ++V L+G++GR++EAYE+I
Sbjct: 266 SITFLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELI 325
Query: 312 KTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPEDDRGIYRLIHDLYVMGEK 371
++M +EP+VV++ S LS+ + +K E+ E I+ + + G Y L+ ++Y +K
Sbjct: 326 ESMPIEPDVVIWRSLLSSSRTYKNPELGEIAIQNL-----SKAKSGDYVLLSNIYSSTKK 380
Query: 372 WEEAAKL 378
WE A K+
Sbjct: 381 WESAQKV 387
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 188 bits (478), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 99/308 (32%), Positives = 177/308 (57%), Gaps = 6/308 (1%)
Query: 70 DACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGS 129
DA F+ MP + + N MIVG+ G++ +AR VF+ RD+ + MI AY G
Sbjct: 252 DAEEFFEVMPMKPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGF 311
Query: 130 SKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAEL 189
+ L LF + + +G++P + ++LS CA + SL G+ VH +V+ ++ + +
Sbjct: 312 ELEALDLFAQ-MQKQGVRPSFPSLISILSVCATLASLQY--GRQVHAHLVRCQFDDDVYV 368
Query: 190 GATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGV 249
+ L+ MY K G L A +VF+ ++++ W ++I G A G EEAL +F +M +G
Sbjct: 369 ASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGT 428
Query: 250 RPNELTFTGVLSACAHAGLVEEGRRYFKMIED-YGMEPKVHHYASLVYLVGKSGRLEEAY 308
PN++T +L+AC++AG +EEG F+ +E + + P V HY+ V ++G++G++++A
Sbjct: 429 MPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAM 488
Query: 309 EIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPEDDRGIYRLIHDLYVM 368
E+I++M ++P+ V+G+ L ACK H + ++AE +++ D+ G Y L+ +
Sbjct: 489 ELIESMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFE--NEPDNAGTYVLLSSINAS 546
Query: 369 GEKWEEAA 376
KW + A
Sbjct: 547 RSKWGDVA 554
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 125/265 (47%), Gaps = 21/265 (7%)
Query: 74 LFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQG 133
LFDEM RN V+WN ++ GY ++ + AR VFE P+R+ VS ++M+ Y G +
Sbjct: 70 LFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEA 129
Query: 134 LSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATL 193
SLF R+ + ++V+ + G G + A K VK + +
Sbjct: 130 ESLFWRM-----PERNEVSWTVMFGGLIDDGRID-KARKLYDMMPVK-----DVVASTNM 178
Query: 194 VNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNE 253
+ + G + A ++F+ M ERNV++WT +I G Q + A +FE M E
Sbjct: 179 IGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVM----PEKTE 234
Query: 254 LTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKT 313
+++T +L +G +E+ +F+++ M+P + A +V G+ G + +A +
Sbjct: 235 VSWTSMLLGYTLSGRIEDAEEFFEVMP---MKPVIACNAMIVGF-GEVGEISKARRVFDL 290
Query: 314 MKVEPNVVVFGSFLSACKEHKQFEM 338
M+ N G + E K FE+
Sbjct: 291 MEDRDNATWRG--MIKAYERKGFEL 313
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/315 (22%), Positives = 131/315 (41%), Gaps = 24/315 (7%)
Query: 57 NCLLNAYVLLSFL-DACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSV 115
N L++ Y+ + +A +F+ MP RN V+W M+ GY + G V A +F P+R+ V
Sbjct: 83 NGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEV 142
Query: 116 SLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVH 175
S + M + G + L+ D + V++ +G L
Sbjct: 143 SWTVMFGGLIDDGRIDKARKLY-----------DMMPVKDVVASTNMIGGLCREGRVDEA 191
Query: 176 GFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCE 235
I E N T++ Y + + A +FE+M E+ +SWT+++ G G E
Sbjct: 192 RLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIE 251
Query: 236 EALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLV 295
+A FE M + V + ++ G + + RR F ++ED + ++
Sbjct: 252 DAEEFFEVMPMKPV----IACNAMIVGFGEVGEISKARRVFDLMEDRDNAT----WRGMI 303
Query: 296 YLVGKSGRLEEAYEIIKTMK---VEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKP 352
+ G EA ++ M+ V P+ S LS C + +V ++R +
Sbjct: 304 KAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVR-CQF 362
Query: 353 EDDRGIYRLIHDLYV 367
+DD + ++ +YV
Sbjct: 363 DDDVYVASVLMTMYV 377
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 95/205 (46%), Gaps = 39/205 (19%)
Query: 1 MHLYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLL 60
+ L++++ + GV SF + ++ S + L SL + +HAH+++ F ++VA+ L+
Sbjct: 316 LDLFAQMQKQGVR-PSFPSLISILSVCATLASLQYGRQVHAHLVRCQF-DDDVYVASVLM 373
Query: 61 NAYVLL-SFLDACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQR----DSV 115
YV + A ++FD +++ + WN++I GY+ G + A ++F E P + V
Sbjct: 374 TMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKV 433
Query: 116 SLSSMISAYNNIGSSKQGLSLF------------------------------RRVLLFEG 145
+L ++++A + G ++GL +F + + L E
Sbjct: 434 TLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIES 493
Query: 146 --IKPDQVTAGAVLSGCAHMGSLGL 168
IKPD GA+L C L L
Sbjct: 494 MTIKPDATVWGALLGACKTHSRLDL 518
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 81/180 (45%), Gaps = 32/180 (17%)
Query: 192 TLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRP 251
++V+ Y G+ + A +F+ M ERNV+SW L+ G + EA VFE M
Sbjct: 53 SIVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELM----PER 108
Query: 252 NELTFTGVLSACAHAGLVEEGRRYF----------------KMIED---------YGMEP 286
N +++T ++ G+V E F +I+D Y M P
Sbjct: 109 NVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEVSWTVMFGGLIDDGRIDKARKLYDMMP 168
Query: 287 KVHHYASLVYLVG--KSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIE 344
AS + G + GR++EA I M+ E NVV + + ++ +++ + ++A ++ E
Sbjct: 169 VKDVVASTNMIGGLCREGRVDEARLIFDEMR-ERNVVTWTTMITGYRQNNRVDVARKLFE 227
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 188 bits (478), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 105/293 (35%), Positives = 180/293 (61%), Gaps = 6/293 (2%)
Query: 87 NTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGI 146
++++V Y SG+V+ A +VFEE P+R+ VS ++MIS + L L+ + +
Sbjct: 159 SSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSK-MRKSTS 217
Query: 147 KPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNA 206
P+ T A+LS C G+LG G+SVH + G + + +L++MY K G L++A
Sbjct: 218 DPNDYTFTALLSACTGSGALG--QGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDA 275
Query: 207 AMVFELMVERNVLSWTALICGAAQWGFCEEALVVFE-KMRVAGVRPNELTFTGVLSACAH 265
+F+ ++V+SW ++I G AQ G +A+ +FE M +G +P+ +T+ GVLS+C H
Sbjct: 276 FRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRH 335
Query: 266 AGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGS 325
AGLV+EGR++F ++ ++G++P+++HY+ LV L+G+ G L+EA E+I+ M ++PN V++GS
Sbjct: 336 AGLVKEGRKFFNLMAEHGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGS 395
Query: 326 FLSACKEHKQFEMAERVIEQVLRMVKPEDDRGIYRLIHDLYVMGEKWEEAAKL 378
L +C+ H R E+ L M++P D + + +LY W+EAA +
Sbjct: 396 LLFSCRVHGDVWTGIRAAEERL-MLEP-DCAATHVQLANLYASVGYWKEAATV 446
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 78/251 (31%), Positives = 121/251 (48%), Gaps = 12/251 (4%)
Query: 94 SRSGDVQRAREVF---EEAPQRDSVSLSSM-ISAYNNIGSSKQGLSLFRRVLLFE----G 145
S+SG V ++ F +E Q DS IS ++ +K G+S ++ E
Sbjct: 51 SKSGGVSNRQDHFGFVQEFRQTDSWRFRGQAISEDFDLSRTKNGVSSVLEEVMLEDSSSS 110
Query: 146 IKPDQVTAGAV-LSGCAHMGSLG--LLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGV 202
+K D + A LS L G H +K G+ + LG++LV +Y G
Sbjct: 111 VKRDGWSFDAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGE 170
Query: 203 LRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSA 262
+ NA VFE M ERNV+SWTA+I G AQ + L ++ KMR + PN+ TFT +LSA
Sbjct: 171 VENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSA 230
Query: 263 CAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVV 322
C +G + +GR G++ +H SL+ + K G L++A+ I +VV
Sbjct: 231 CTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFS-NKDVVS 289
Query: 323 FGSFLSACKEH 333
+ S ++ +H
Sbjct: 290 WNSMIAGYAQH 300
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 105/227 (46%), Gaps = 37/227 (16%)
Query: 1 MHLYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLL 60
+ LYSK+ ++ + + L +CT +L + +H + +G ++LH++N L+
Sbjct: 206 LKLYSKMRKSTSDPNDYTFTALLSACTGS-GALGQGRSVHCQTLHMGL-KSYLHISNSLI 263
Query: 61 NAYVLLSFL-DACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSS 119
+ Y L DA +FD+ N++ V+WN+MI GY++ G +A E+FE
Sbjct: 264 SMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFE------------ 311
Query: 120 MISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIV 179
++ G KPD +T VLS C H G + G+ +
Sbjct: 312 -------------------LMMPKSGTKPDAITYLGVLSSCRHAGLVK--EGRKFFNLMA 350
Query: 180 KNGWELNAELGATLVNMYAKGGVLRNAAMVFELM-VERNVLSWTALI 225
++G + + LV++ + G+L+ A + E M ++ N + W +L+
Sbjct: 351 EHGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLL 397
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 187 bits (476), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 111/385 (28%), Positives = 212/385 (55%), Gaps = 43/385 (11%)
Query: 33 LTIIQHLHAHIIKLGFAPTHLHVANCLLNAYVLLSFLD-ACILFDEMPNRNTVTWNTMIV 91
L + + +H +I++ ++V L++ Y+ +L A ++FD M +N V WN+++
Sbjct: 241 LKLGKAIHGYILRNQLW-YDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVS 299
Query: 92 GYSRSGDVQRAREVF----EEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIK 147
G S + ++ A + +E + D+++ +S+ S Y +G ++ L + + + +G+
Sbjct: 300 GLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGK-MKEKGVA 358
Query: 148 PDQVTAGAVLSGCAH--------------------------------MGSLGLL-AGKSV 174
P+ V+ A+ SGC+ +G L LL +GK V
Sbjct: 359 PNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEV 418
Query: 175 HGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFC 234
HGF ++ +A + LV+MY K G L++A +F + +++ SW ++ G A +G
Sbjct: 419 HGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRG 478
Query: 235 EEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIED-YGMEPKVHHYAS 293
EE + F M AG+ P+ +TFT VLS C ++GLV+EG +YF ++ YG+ P + H +
Sbjct: 479 EEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSC 538
Query: 294 LVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPE 353
+V L+G+SG L+EA++ I+TM ++P+ ++G+FLS+CK H+ E+AE + + L++++P
Sbjct: 539 MVDLLGRSGYLDEAWDFIQTMSLKPDATIWGAFLSSCKIHRDLELAE-IAWKRLQVLEPH 597
Query: 354 DDRGIYRLIHDLYVMGEKWEEAAKL 378
+ Y ++ +LY +WE+ ++
Sbjct: 598 NSAN-YMMMINLYSNLNRWEDVERI 621
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/335 (24%), Positives = 172/335 (51%), Gaps = 13/335 (3%)
Query: 1 MHLYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLL 60
+ L+ ++ +G +V L+ C S+ + +H ++++LG +++ + N L+
Sbjct: 74 VELFREMQFSGAKAYDSTMVKLLQVC-SNKEGFAEGRQIHGYVLRLGL-ESNVSMCNSLI 131
Query: 61 NAYVLLSFLD-ACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAP----QRDSV 115
Y L+ + +F+ M +RN +WN+++ Y++ G V A + +E + D V
Sbjct: 132 VMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIV 191
Query: 116 SLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVH 175
+ +S++S Y + G SK +++ +R+ + G+KP + ++L A G L L GK++H
Sbjct: 192 TWNSLLSGYASKGLSKDAIAVLKRMQI-AGLKPSTSSISSLLQAVAEPGHLKL--GKAIH 248
Query: 176 GFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCE 235
G+I++N + + TL++MY K G L A MVF++M +N+++W +L+ G + +
Sbjct: 249 GYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLK 308
Query: 236 EALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLV 295
+A + +M G++P+ +T+ + S A G E+ +++ G+ P V + ++
Sbjct: 309 DAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIF 368
Query: 296 YLVGKSGRLEEAYEIIKTMKVE---PNVVVFGSFL 327
K+G A ++ M+ E PN + L
Sbjct: 369 SGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLL 403
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 130/270 (48%), Gaps = 39/270 (14%)
Query: 39 LHAHIIKLGFAPTHLHVANCLLNAY---VLLSFLDACILFDEMPNRNTVTWNTMIVGYSR 95
+H +IK G + V + + Y V L F + LFDEMP R+ + WN +++ R
Sbjct: 9 IHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANK--LFDEMPKRDDLAWNEIVMVNLR 66
Query: 96 SGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGA 155
SG+ ++A E+F E + F G K T
Sbjct: 67 SGNWEKAVELFRE--------------------------------MQFSGAKAYDSTMVK 94
Query: 156 VLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVE 215
+L C++ G G+ +HG++++ G E N + +L+ MY++ G L + VF M +
Sbjct: 95 LLQVCSN--KEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKD 152
Query: 216 RNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRY 275
RN+ SW +++ + G+ ++A+ + ++M + G++P+ +T+ +LS A GL ++
Sbjct: 153 RNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAV 212
Query: 276 FKMIEDYGMEPKVHHYASLVYLVGKSGRLE 305
K ++ G++P +SL+ V + G L+
Sbjct: 213 LKRMQIAGLKPSTSSISSLLQAVAEPGHLK 242
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 85/161 (52%), Gaps = 4/161 (2%)
Query: 171 GKSVHGFIVKNGWELNAELGATLVNM--YAKGGVLRNAAMVFELMVERNVLSWTALICGA 228
G ++HG ++K G + N++ +M Y + L A +F+ M +R+ L+W ++
Sbjct: 6 GLTIHGGLIKRGLD-NSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVN 64
Query: 229 AQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKV 288
+ G E+A+ +F +M+ +G + + T +L C++ EGR+ + G+E V
Sbjct: 65 LRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNV 124
Query: 289 HHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSA 329
SL+ + ++G+LE + ++ +MK + N+ + S LS+
Sbjct: 125 SMCNSLIVMYSRNGKLELSRKVFNSMK-DRNLSSWNSILSS 164
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 187 bits (474), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 115/387 (29%), Positives = 207/387 (53%), Gaps = 42/387 (10%)
Query: 4 YSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLLNAY 63
Y ++ + V ++ +KSC + L +L I + +H H + GF L+ Y
Sbjct: 95 YRRMLSSNVSPSNYTFTSVIKSC-ADLSALRIGKGVHCHAVVSGFG----------LDTY 143
Query: 64 VLLSFLDACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISA 123
V + ++ YS+ GD++ AR+VF+ P++ V+ +S++S
Sbjct: 144 VQAA---------------------LVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSG 182
Query: 124 YNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGW 183
+ G + + + +F + + G +PD T ++LS CA G++ L G VH +I+ G
Sbjct: 183 FEQNGLADEAIQVFYQ-MRESGFEPDSATFVSLLSACAQTGAVSL--GSWVHQYIISEGL 239
Query: 184 ELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEK 243
+LN +LG L+N+Y++ G + A VF+ M E NV +WTA+I G+ ++A+ +F K
Sbjct: 240 DLNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNK 299
Query: 244 MRV-AGVRPNELTFTGVLSACAHAGLVEEGRRYFK-MIEDYGMEPKVHHYASLVYLVGKS 301
M G PN +TF VLSACAHAGLVEEGR +K M + Y + P V H+ +V ++G++
Sbjct: 300 MEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRA 359
Query: 302 GRLEEAYEIIKTMKVEPNVV---VFGSFLSACKEHKQFEMAERVIEQVLRMVKPEDDRGI 358
G L+EAY+ I + ++ + L ACK H+ +++ + ++++ + +P D+ G
Sbjct: 360 GFLDEAYKFIHQLDATGKATAPALWTAMLGACKMHRNYDLGVEIAKRLIAL-EP-DNPGH 417
Query: 359 YRLIHDLYVMGEKWEEAAKLGPGFDFN 385
+ ++ ++Y + K +E + + G N
Sbjct: 418 HVMLSNIYALSGKTDEVSHIRDGMMRN 444
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/253 (30%), Positives = 127/253 (50%), Gaps = 10/253 (3%)
Query: 105 VFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMG 164
+F P D +S+I + + + ++ +RR +L + P T +V+ CA +
Sbjct: 63 LFLSVPLPDDFLFNSVIKSTSKLRLPLHCVAYYRR-MLSSNVSPSNYTFTSVIKSCADLS 121
Query: 165 SLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTAL 224
+L + GK VH V +G+ L+ + A LV Y+K G + A VF+ M E+++++W +L
Sbjct: 122 ALRI--GKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSL 179
Query: 225 ICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGM 284
+ G Q G +EA+ VF +MR +G P+ TF +LSACA G V G + I G+
Sbjct: 180 VSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGL 239
Query: 285 EPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIE 344
+ V +L+ L + G + +A E+ MK E NV + + +SA H + A +
Sbjct: 240 DLNVKLGTALINLYSRCGDVGKAREVFDKMK-ETNVAAWTAMISAYGTHGYGQQAVELFN 298
Query: 345 QVLRMVKPEDDRG 357
K EDD G
Sbjct: 299 ------KMEDDCG 305
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 187 bits (474), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 119/380 (31%), Positives = 202/380 (53%), Gaps = 45/380 (11%)
Query: 1 MHLYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLL 60
M LY ++ GV D F LK+C + S+ I + +H ++K GF
Sbjct: 180 MALYFQMAEDGVKPDRFTFPRVLKACGG-IGSVQIGEAIHRDLVKEGFG----------Y 228
Query: 61 NAYVLLSFLDACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSM 120
+ YVL N ++V Y++ GD+ +AR VF+ P +D VS +SM
Sbjct: 229 DVYVL---------------------NALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSM 267
Query: 121 ISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVK 180
++ Y + G + L +F R+++ GI+PD+V +VL+ L G+ +HG++++
Sbjct: 268 LTGYLHHGLLHEALDIF-RLMVQNGIEPDKVAISSVLARV-----LSFKHGRQLHGWVIR 321
Query: 181 NGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVV 240
G E + L+ +Y+K G L A +F+ M+ER+ +SW A+I ++ L
Sbjct: 322 RGMEWELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISAHSK---NSNGLKY 378
Query: 241 FEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFK-MIEDYGMEPKVHHYASLVYLVG 299
FE+M A +P+ +TF VLS CA+ G+VE+G R F M ++YG++PK+ HYA +V L G
Sbjct: 379 FEQMHRANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYG 438
Query: 300 KSGRLEEAYE-IIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPEDDRGI 358
++G +EEAY I++ M +E V+G+ L AC H ++ E V Q L ++P+++
Sbjct: 439 RAGMMEEAYSMIVQEMGLEAGPTVWGALLYACYLHGNTDIGE-VAAQRLFELEPDNEHNF 497
Query: 359 YRLIHDLYVMGEKWEEAAKL 378
LI +Y ++ E+ ++
Sbjct: 498 ELLIR-IYSKAKRAEDVERV 516
Score = 104 bits (260), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 144/277 (51%), Gaps = 14/277 (5%)
Query: 81 RNTVTWNTMIVG-YSRSGDVQRAREVFEEAPQRDSVSLS--SMISAYNNIGSSKQGLSLF 137
RN + ++ +V Y+ G + A EVF+ +RDS + S+IS Y +G + ++L+
Sbjct: 124 RNNLGISSKLVRLYASCGYAEVAHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALY 183
Query: 138 RRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMY 197
+ + +G+KPD+ T VL C +GS+ + G+++H +VK G+ + + LV MY
Sbjct: 184 FQ-MAEDGVKPDRFTFPRVLKACGGIGSVQI--GEAIHRDLVKEGFGYDVYVLNALVVMY 240
Query: 198 AKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFT 257
AK G + A VF+++ ++ +SW +++ G G EAL +F M G+ P+++ +
Sbjct: 241 AKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAIS 300
Query: 258 GVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVE 317
VL A + GR+ + GME ++ +L+ L K G+L +A I M +E
Sbjct: 301 SVL---ARVLSFKHGRQLHGWVIRRGMEWELSVANALIVLYSKRGQLGQACFIFDQM-LE 356
Query: 318 PNVVVFGSFLSACKEHKQFEMAERVIEQVLRM-VKPE 353
+ V + + +SA H + + EQ+ R KP+
Sbjct: 357 RDTVSWNAIISA---HSKNSNGLKYFEQMHRANAKPD 390
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 76/165 (46%), Gaps = 3/165 (1%)
Query: 171 GKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNV--LSWTALICGA 228
G VH I N + + LV +YA G A VF+ M +R+ +W +LI G
Sbjct: 111 GVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRMSKRDSSPFAWNSLISGY 170
Query: 229 AQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKV 288
A+ G E+A+ ++ +M GV+P+ TF VL AC G V+ G + + G V
Sbjct: 171 AELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDV 230
Query: 289 HHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEH 333
+ +LV + K G + +A + M + V + S L+ H
Sbjct: 231 YVLNALVVMYAKCGDIVKARNVFD-MIPHKDYVSWNSMLTGYLHH 274
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 186 bits (472), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 105/294 (35%), Positives = 181/294 (61%), Gaps = 8/294 (2%)
Query: 87 NTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGI 146
N +I YS+ G+++ A +FE P +D +S +++I Y ++ K+ L LF+ +L G
Sbjct: 305 NALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQE-MLRSGE 363
Query: 147 KPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVK--NGWELNAELGATLVNMYAKGGVLR 204
P+ VT ++L CAH+G++ + G+ +H +I K G + L +L++MYAK G +
Sbjct: 364 TPNDVTMLSILPACAHLGAIDI--GRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIE 421
Query: 205 NAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACA 264
A VF ++ +++ SW A+I G A G + + +F +MR G++P+++TF G+LSAC+
Sbjct: 422 AAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACS 481
Query: 265 HAGLVEEGRRYFK-MIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVF 323
H+G+++ GR F+ M +DY M PK+ HY ++ L+G SG +EA E+I M++EP+ V++
Sbjct: 482 HSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIW 541
Query: 324 GSFLSACKEHKQFEMAERVIEQVLRMVKPEDDRGIYRLIHDLYVMGEKWEEAAK 377
S L ACK H E+ E E +++ ++PE+ G Y L+ ++Y +W E AK
Sbjct: 542 CSLLKACKMHGNVELGESFAENLIK-IEPENP-GSYVLLSNIYASAGRWNEVAK 593
Score = 171 bits (433), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 106/331 (32%), Positives = 184/331 (55%), Gaps = 12/331 (3%)
Query: 1 MHLYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLL 60
+ LY + G+ +S+ F LKSC + Q +H H++KLG L+V L+
Sbjct: 119 LKLYVCMISLGLLPNSYTFPFVLKSCAKS-KAFKEGQQIHGHVLKLG-CDLDLYVHTSLI 176
Query: 61 NAYVLLSFL-DACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSS 119
+ YV L DA +FD+ P+R+ V++ +I GY+ G ++ A+++F+E P +D VS ++
Sbjct: 177 SMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNA 236
Query: 120 MISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIV 179
MIS Y G+ K+ L LF+ ++ ++PD+ T V+S CA GS+ L G+ VH +I
Sbjct: 237 MISGYAETGNYKEALELFKD-MMKTNVRPDESTMVTVVSACAQSGSIEL--GRQVHLWID 293
Query: 180 KNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALV 239
+G+ N ++ L+++Y+K G L A +FE + ++V+SW LI G +EAL+
Sbjct: 294 DHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALL 353
Query: 240 VFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIED--YGMEPKVHHYASLVYL 297
+F++M +G PN++T +L ACAH G ++ GR I+ G+ SL+ +
Sbjct: 354 LFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDM 413
Query: 298 VGKSGRLEEAYEIIKTMKVEP----NVVVFG 324
K G +E A+++ ++ + N ++FG
Sbjct: 414 YAKCGDIEAAHQVFNSILHKSLSSWNAMIFG 444
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 103/390 (26%), Positives = 166/390 (42%), Gaps = 96/390 (24%)
Query: 13 PFDSF---CIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLLNAYVLLSFL 69
P+DS + L +C + L SL II HA +IK+G LH N Y L +
Sbjct: 27 PYDSIRNHPSLSLLHNCKT-LQSLRII---HAQMIKIG-----LHNTN-----YALSKLI 72
Query: 70 DACIL-------------FDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVS 116
+ CIL F + N + WNTM G++ S D A +++
Sbjct: 73 EFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLY---------- 122
Query: 117 LSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHG 176
MIS G+ P+ T VL CA S G+ +HG
Sbjct: 123 -VCMISL---------------------GLLPNSYTFPFVLKSCAK--SKAFKEGQQIHG 158
Query: 177 FIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCE- 235
++K G +L+ + +L++MY + G L +A VF+ R+V+S+TALI G A G+ E
Sbjct: 159 HVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIEN 218
Query: 236 ------------------------------EALVVFEKMRVAGVRPNELTFTGVLSACAH 265
EAL +F+ M VRP+E T V+SACA
Sbjct: 219 AQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQ 278
Query: 266 AGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGS 325
+G +E GR+ I+D+G + +L+ L K G LE A + + + + +V+ + +
Sbjct: 279 SGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYK-DVISWNT 337
Query: 326 FLSACKEHKQFEMAERVIEQVLRMVKPEDD 355
+ ++ A + +++LR + +D
Sbjct: 338 LIGGYTHMNLYKEALLLFQEMLRSGETPND 367
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 185 bits (470), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 104/285 (36%), Positives = 164/285 (57%), Gaps = 10/285 (3%)
Query: 93 YSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVT 152
YS+ G ++ AR+V++ P+ D VS SS+IS Y+ G + G LFR +++ G D
Sbjct: 596 YSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVM-SGFTMDSFA 654
Query: 153 AGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFEL 212
++L A L G VH +I K G +G++L+ MY+K G + + F
Sbjct: 655 ISSILKAAALSDESSL--GAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQ 712
Query: 213 MVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEG 272
+ ++++WTALI AQ G EAL V+ M+ G +P+++TF GVLSAC+H GLVEE
Sbjct: 713 INGPDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEES 772
Query: 273 RRYF---KMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSA 329
YF M++DYG+EP+ HY +V +G+SGRL EA I M ++P+ +V+G+ L+A
Sbjct: 773 --YFHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMHIKPDALVWGTLLAA 830
Query: 330 CKEHKQFEMAERVIEQVLRMVKPEDDRGIYRLIHDLYVMGEKWEE 374
CK H + E+ + ++ + + +P D L + L +GE W+E
Sbjct: 831 CKIHGEVELGKVAAKKAIEL-EPSDAGAYISLSNILAEVGE-WDE 873
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 139/258 (53%), Gaps = 8/258 (3%)
Query: 87 NTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGI 146
+++ YS+ G ++ + ++F+ P +D+ +SMIS +N G ++ + LF +L +G
Sbjct: 489 SSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSE-MLDDGT 547
Query: 147 KPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNA 206
PD+ T AVL+ C+ SL GK +HG+ ++ G + +LG+ LVNMY+K G L+ A
Sbjct: 548 SPDESTLAAVLTVCSSHPSLP--RGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLA 605
Query: 207 AMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHA 266
V++ + E + +S ++LI G +Q G ++ ++F M ++G + + +L A A +
Sbjct: 606 RQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALS 665
Query: 267 GLVEEGRRYFKMIEDYGM--EPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFG 324
G + I G+ EP V +SL+ + K G +++ + + P+++ +
Sbjct: 666 DESSLGAQVHAYITKIGLCTEPSVG--SSLLTMYSKFGSIDDCCKAFSQIN-GPDLIAWT 722
Query: 325 SFLSACKEHKQFEMAERV 342
+ +++ +H + A +V
Sbjct: 723 ALIASYAQHGKANEALQV 740
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 143/294 (48%), Gaps = 29/294 (9%)
Query: 89 MIVGYSRSGDVQRAREVFEEAP--QRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGI 146
+I YS+SGD+ + +VFE+ QR ++ ++ MI++++ + + LF R +L EG+
Sbjct: 392 LISMYSKSGDIDLSEQVFEDLDDIQRQNI-VNVMITSFSQSKKPGKAIRLFTR-MLQEGL 449
Query: 147 KPDQVTAGAVLS--GCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLR 204
+ D+ + ++LS C ++G K VHG+ +K+G L+ +G++L +Y+K G L
Sbjct: 450 RTDEFSVCSLLSVLDCLNLG-------KQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLE 502
Query: 205 NAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACA 264
+ +F+ + ++ W ++I G ++G+ EA+ +F +M G P+E T VL+ C+
Sbjct: 503 ESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCS 562
Query: 265 HAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFG 324
+ G+ G++ + ++LV + K G L+ A ++ + E + V
Sbjct: 563 SHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLP-ELDPVSCS 621
Query: 325 SFLSACKEH---------------KQFEMAERVIEQVLRMVKPEDDRGIYRLIH 363
S +S +H F M I +L+ D+ + +H
Sbjct: 622 SLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESSLGAQVH 675
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 89/353 (25%), Positives = 156/353 (44%), Gaps = 42/353 (11%)
Query: 1 MHLYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLL 60
+ +SK+H G + + +C S L + + + H IK+G+ + V + L+
Sbjct: 135 LRFFSKMHFLGFEANEISYGSVISAC-SALQAPLFSELVCCHTIKMGYFFYEV-VESALI 192
Query: 61 NAYVL-LSFLDACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSS 119
+ + L F DA +F + + N WNT+I G R+ + ++F E
Sbjct: 193 DVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHE----------- 241
Query: 120 MISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIV 179
M + KPD T +VL+ CA + L GK V ++
Sbjct: 242 MCVGFQ---------------------KPDSYTYSSVLAACASLEKLRF--GKVVQARVI 278
Query: 180 KNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALV 239
K G E + + +V++YAK G + A VF + +V+SWT ++ G + AL
Sbjct: 279 KCGAE-DVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALE 337
Query: 240 VFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVG 299
+F++MR +GV N T T V+SAC +V E + + G A+L+ +
Sbjct: 338 IFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYS 397
Query: 300 KSGRL---EEAYEIIKTMKVEPNV-VVFGSFLSACKEHKQFEMAERVIEQVLR 348
KSG + E+ +E + ++ + V V+ SF + K K + R++++ LR
Sbjct: 398 KSGDIDLSEQVFEDLDDIQRQNIVNVMITSFSQSKKPGKAIRLFTRMLQEGLR 450
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 134/283 (47%), Gaps = 15/283 (5%)
Query: 59 LLNAYVLLSFLDACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLS 118
+L A++L +L + FD ++ ++W YS SG + A ++F+ PQ D VS +
Sbjct: 69 ILQAHLLRRYL---LPFDVFLTKSLLSW------YSNSGSMADAAKLFDTIPQPDVVSCN 119
Query: 119 SMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFI 178
MIS Y ++ L F + + F G + ++++ G+V+S C+ + + L + V
Sbjct: 120 IMISGYKQHRLFEESLRFFSK-MHFLGFEANEISYGSVISACSALQA--PLFSELVCCHT 176
Query: 179 VKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEAL 238
+K G+ + + L+++++K +A VF + NV W +I GA +
Sbjct: 177 IKMGYFFYEVVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVF 236
Query: 239 VVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLV 298
+F +M V +P+ T++ VL+ACA + G+ + G E V ++V L
Sbjct: 237 DLFHEMCVGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCGAE-DVFVCTAIVDLY 295
Query: 299 GKSGRLEEAYEIIKTMKVEPNVVVFGSFLSA-CKEHKQFEMAE 340
K G + EA E+ + P+VV + LS K + F E
Sbjct: 296 AKCGHMAEAMEVFSRIP-NPSVVSWTVMLSGYTKSNDAFSALE 337
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 185 bits (469), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 116/377 (30%), Positives = 197/377 (52%), Gaps = 41/377 (10%)
Query: 3 LYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLLNA 62
L+S++ G+ + IV L +C S + L + LH+ ++KLGF HL L++
Sbjct: 309 LFSRMFSAGIKPSEYTIVGVLNAC-SDICYLEEGKQLHSFLLKLGF-ERHLFATTALVDM 366
Query: 63 YVLLSFLDACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMIS 122
Y +++G + AR+ F+ +RD +S+IS
Sbjct: 367 Y------------------------------AKAGCLADARKGFDCLQERDVALWTSLIS 396
Query: 123 AYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNG 182
Y +++ L L+RR + GI P+ T +VL C+ + +L L GK VHG +K+G
Sbjct: 397 GYVQNSDNEEALILYRR-MKTAGIIPNDPTMASVLKACSSLATLEL--GKQVHGHTIKHG 453
Query: 183 WELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFE 242
+ L +G+ L MY+K G L + +VF ++V+SW A+I G + G +EAL +FE
Sbjct: 454 FGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFE 513
Query: 243 KMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDY-GMEPKVHHYASLVYLVGKS 301
+M G+ P+++TF ++SAC+H G VE G YF M+ D G++PKV HYA +V L+ ++
Sbjct: 514 EMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRA 573
Query: 302 GRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPEDD-----R 356
G+L+EA E I++ ++ + ++ LSACK H + E+ E+++ + E
Sbjct: 574 GQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCELGVYAGEKLMALGSRESSTYVQLS 633
Query: 357 GIYRLIHDLYVMGEKWE 373
GIY + + + W+
Sbjct: 634 GIYTALGRMRDVERVWK 650
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/269 (30%), Positives = 146/269 (54%), Gaps = 5/269 (1%)
Query: 87 NTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGI 146
N ++ YS+ + A ++F+ + R+S++ S+M++ Y+ G S + + LF R + GI
Sbjct: 260 NALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSR-MFSAGI 318
Query: 147 KPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNA 206
KP + T VL+ C+ + L GK +H F++K G+E + LV+MYAK G L +A
Sbjct: 319 KPSEYTIVGVLNACSDICYLE--EGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADA 376
Query: 207 AMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHA 266
F+ + ER+V WT+LI G Q EEAL+++ +M+ AG+ PN+ T VL AC+
Sbjct: 377 RKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSL 436
Query: 267 GLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSF 326
+E G++ +G +V ++L + K G LE+ + + +VV + +
Sbjct: 437 ATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTP-NKDVVSWNAM 495
Query: 327 LSACKEHKQFEMAERVIEQVL-RMVKPED 354
+S + Q + A + E++L ++P+D
Sbjct: 496 ISGLSHNGQGDEALELFEEMLAEGMEPDD 524
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 97/340 (28%), Positives = 163/340 (47%), Gaps = 36/340 (10%)
Query: 1 MHLYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLL 60
M L+ ++ + +++ + K+ S L S T+ + HA ++K+ + ++V L+
Sbjct: 103 MQLFREMRAQDILPNAYTLAGIFKA-ESSLQSSTVGRQAHALVVKMS-SFGDIYVDTSLV 160
Query: 61 NAYVLLSFL-DACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSS 119
Y + D +F MP RNT TW+TM+ GY+ G V+ A +VF
Sbjct: 161 GMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVF------------- 207
Query: 120 MISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIV 179
+LF R EG D V AVLS A +GL G+ +H +
Sbjct: 208 ---------------NLFLREKE-EGSDSDYVFT-AVLSSLAATIYVGL--GRQIHCITI 248
Query: 180 KNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALV 239
KNG L LV MY+K L A +F+ +RN ++W+A++ G +Q G EA+
Sbjct: 249 KNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVK 308
Query: 240 VFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVG 299
+F +M AG++P+E T GVL+AC+ +EEG++ + G E + +LV +
Sbjct: 309 LFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYA 368
Query: 300 KSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMA 339
K+G L +A + ++ E +V ++ S +S ++ E A
Sbjct: 369 KAGCLADARKGFDCLQ-ERDVALWTSLISGYVQNSDNEEA 407
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 130/297 (43%), Gaps = 39/297 (13%)
Query: 23 LKSCTSHLHSLTII--QHLHAHIIKLGFAPTHLHVANCLLNAYVLLSFL-DACILFDEMP 79
LK T H ++ + +H II+ G A T + AN L+N Y L A +F+ +
Sbjct: 18 LKKLTHHSQQRNLVAGRAVHGQIIRTG-ASTCIQHANVLVNFYAKCGKLAKAHSIFNAII 76
Query: 80 NRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRR 139
++ V+WN++I GYS++G I SS + LFR
Sbjct: 77 CKDVVSWNSLITGYSQNG----------------------------GISSSYTVMQLFRE 108
Query: 140 VLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAK 199
+ + I P+ T + + + S + G+ H +VK + + +LV MY K
Sbjct: 109 -MRAQDILPNAYTLAGIFKAESSLQSSTV--GRQAHALVVKMSSFGDIYVDTSLVGMYCK 165
Query: 200 GGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFE---KMRVAGVRPNELTF 256
G++ + VF M ERN +W+ ++ G A G EEA+ VF + + G ++ F
Sbjct: 166 AGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEG-SDSDYVF 224
Query: 257 TGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKT 313
T VLS+ A V GR+ + G+ V +LV + K L EA ++ +
Sbjct: 225 TAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDS 281
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 90/197 (45%), Gaps = 4/197 (2%)
Query: 162 HMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSW 221
H L+AG++VHG I++ G + LVN YAK G L A +F ++ ++V+SW
Sbjct: 24 HSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSW 83
Query: 222 TALICGAAQWGFCEEALVV---FEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKM 278
+LI G +Q G + V F +MR + PN T G+ A + GR+ +
Sbjct: 84 NSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHAL 143
Query: 279 IEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEM 338
+ ++ SLV + K+G +E+ ++ M E N + + +S + E
Sbjct: 144 VVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMP-ERNTYTWSTMVSGYATRGRVEE 202
Query: 339 AERVIEQVLRMVKPEDD 355
A +V LR + D
Sbjct: 203 AIKVFNLFLREKEEGSD 219
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 185 bits (469), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 132/449 (29%), Positives = 220/449 (48%), Gaps = 79/449 (17%)
Query: 1 MHLYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLL 60
+ LY ++ +G+ D F F +C + L + + + +H+ + K+G +H+ + L+
Sbjct: 117 LSLYRRMKFSGLKPDKFTYNFVFIAC-AKLEEIGVGRSVHSSLFKVGL-ERDVHINHSLI 174
Query: 61 NAYVLLSFLD-ACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVF----EEAPQRDSV 115
Y + A LFDE+ R+TV+WN+MI GYS +G + A ++F EE + D
Sbjct: 175 MMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDER 234
Query: 116 SLSSMISAYNNIG-------------SSKQGLSLF------------------RRV---- 140
+L SM+ A +++G + K GLS F RRV
Sbjct: 235 TLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQM 294
Query: 141 --------------------------LLFE----GIKPDQVTAGAVLSGCAHMGSLGLLA 170
L FE G+ PD T VLS C +G+L L
Sbjct: 295 IKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALEL-- 352
Query: 171 GKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQ 230
GK + + + N + LV+MY K G + A VFE M +N +W A+I A
Sbjct: 353 GKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAYAH 412
Query: 231 WGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYF-KMIEDYGMEPKVH 289
G +EAL++F++M V P+++TF GVLSAC HAGLV +G RYF +M +G+ PK+
Sbjct: 413 QGHAKEALLLFDRMSVP---PSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIE 469
Query: 290 HYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRM 349
HY +++ L+ ++G L+EA+E ++ +P+ ++ + L AC + K + E+ + ++ M
Sbjct: 470 HYTNIIDLLSRAGMLDEAWEFMERFPGKPDEIMLAAILGACHKRKDVAIREKAMRMLMEM 529
Query: 350 VKPEDDRGIYRLIHDLYVMGEKWEEAAKL 378
K + G Y + ++ + W+E+AK+
Sbjct: 530 -KEAKNAGNYVISSNVLADMKMWDESAKM 557
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 120/233 (51%), Gaps = 12/233 (5%)
Query: 87 NTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQG-LSLFRRVLLFEG 145
N +I GD + +F + + S + MI N + + LSL+RR + F G
Sbjct: 69 NFLIPKAVELGDFNYSSFLFSVTEEPNHYSFNYMIRGLTNTWNDHEAALSLYRR-MKFSG 127
Query: 146 IKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRN 205
+KPD+ T V CA + +G+ G+SVH + K G E + + +L+ MYAK G +
Sbjct: 128 LKPDKFTYNFVFIACAKLEEIGV--GRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGY 185
Query: 206 AAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAH 265
A +F+ + ER+ +SW ++I G ++ G+ ++A+ +F KM G P+E T +L AC+H
Sbjct: 186 ARKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSH 245
Query: 266 AGLVEEGRRYFKMIEDYGMEPKVHHY----ASLVYLVGKSGRLEEAYEIIKTM 314
G + GR ++E+ + K+ + L+ + GK G L+ A + M
Sbjct: 246 LGDLRTGR----LLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQM 294
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 184 bits (467), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 112/373 (30%), Positives = 201/373 (53%), Gaps = 12/373 (3%)
Query: 11 GVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGF--APTHLHVANCLLNAYVLLSF 68
+ DS I+ LK C ++ + ++ +H + +K G + N LL+AY
Sbjct: 427 AITLDSVTILSLLKFCI-NVQGIGKVKEVHGYSVKAGLLHDEEEPKLGNALLDAYAKCGN 485
Query: 69 LD-ACILFDEMPNRNT-VTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNN 126
++ A +F + R T V++N+++ GY SG A+ +F E D + S M+ Y
Sbjct: 486 VEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAE 545
Query: 127 IGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELN 186
+ + +FR + G++P+ VT +L CA + SL L+ + HG+I++ G +
Sbjct: 546 SCCPNEAIGVFREIQA-RGMRPNTVTIMNLLPVCAQLASLHLV--RQCHGYIIRGGLG-D 601
Query: 187 AELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRV 246
L TL+++YAK G L++A VF+ R+++ +TA++ G A G +EAL+++ M
Sbjct: 602 IRLKGTLLDVYAKCGSLKHAYSVFQSDARRDLVMFTAMVAGYAVHGRGKEALMIYSHMTE 661
Query: 247 AGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIED-YGMEPKVHHYASLVYLVGKSGRLE 305
+ ++P+ + T +L+AC HAGL+++G + + I +GM+P + YA V L+ + GRL+
Sbjct: 662 SNIKPDHVFITTMLTACCHAGLIQDGLQIYDSIRTVHGMKPTMEQYACAVDLIARGGRLD 721
Query: 306 EAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPEDDRGIYRLIHDL 365
+AY + M VEPN ++G+ L AC + + ++ V +L+ DD G + LI ++
Sbjct: 722 DAYSFVTQMPVEPNANIWGTLLRACTTYNRMDLGHSVANHLLQ--AESDDTGNHVLISNM 779
Query: 366 YVMGEKWEEAAKL 378
Y KWE +L
Sbjct: 780 YAADAKWEGVMEL 792
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 145/333 (43%), Gaps = 47/333 (14%)
Query: 23 LKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLLNAYVLLSFLDAC-ILFDEMPNR 81
+K+C S + LT + LH + KLG V+ +LN Y +D C +F +M +
Sbjct: 28 VKACAS-VSDLTSGRALHGCVFKLGHIACS-EVSKSVLNMYAKCRRMDDCQKMFRQMDSL 85
Query: 82 NTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVL 141
+ V WN ++ G S + ++ + F+ +
Sbjct: 86 DPVVWNIVLTGLS--------------------------------VSCGRETMRFFKAMH 113
Query: 142 LFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAK-G 200
+ KP VT VL C +G GKS+H +I+K G E + +G LV+MYAK G
Sbjct: 114 FADEPKPSSVTFAIVLPLCVRLGDS--YNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFG 171
Query: 201 GVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVL 260
+ +A F+ + +++V+SW A+I G ++ +A F M PN T VL
Sbjct: 172 FIFPDAYTAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVL 231
Query: 261 SACAHAG---LVEEGRR-YFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMK- 315
CA GR+ + +++ ++ V SLV + GR+EEA + M
Sbjct: 232 PVCASMDKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGS 291
Query: 316 ---VEPNVVVFGSFLSACKEHKQFEMAERVIEQ 345
V NVV+ G + S C+ K F++ ++ +
Sbjct: 292 KDLVSWNVVIAG-YASNCEWFKAFQLFHNLVHK 323
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/303 (22%), Positives = 136/303 (44%), Gaps = 50/303 (16%)
Query: 37 QHLHAHIIKLGFAPTHLHVANCLLNAYVLLSFLD-ACILFDEMPNRNTVTWNTMIVGYSR 95
+ +H+++++ + TH+ V N L++ Y+ + ++ A LF M +++ V+WN +I GY+
Sbjct: 247 RQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYAS 306
Query: 96 SGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGA 155
+ + +A ++F + VS PD VT +
Sbjct: 307 NCEWFKAFQLFHNLVHKGDVS-------------------------------PDSVTIIS 335
Query: 156 VLSGCAHMGSLGLLAGKSVHGFIVKNGWEL-NAELGATLVNMYAKGGVLRNAAMVFELMV 214
+L CA + L +GK +H +I+++ + L + +G L++ YA+ G A F LM
Sbjct: 336 ILPVCAQLTDLA--SGKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMS 393
Query: 215 ERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRR 274
++++SW A++ A + L + + + + +T +L C + +G
Sbjct: 394 TKDIISWNAILDAFADSPKQFQFLNLLHHLLNEAITLDSVTILSLLKFCINV----QGIG 449
Query: 275 YFKMIEDYGM---------EPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGS 325
K + Y + EPK+ + +L+ K G +E A++I + +V + S
Sbjct: 450 KVKEVHGYSVKAGLLHDEEEPKLGN--ALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNS 507
Query: 326 FLS 328
LS
Sbjct: 508 LLS 510
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 92/384 (23%), Positives = 162/384 (42%), Gaps = 74/384 (19%)
Query: 7 LHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLLNAYVLL 66
+H+ V DS I+ L C + L L + +H++I++ ++Y+L
Sbjct: 321 VHKGDVSPDSVTIISILPVC-AQLTDLASGKEIHSYILR---------------HSYLL- 363
Query: 67 SFLDACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNN 126
+T N +I Y+R GD A F +D +S ++++ A+ +
Sbjct: 364 --------------EDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFAD 409
Query: 127 IGSSKQ-GLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGW-- 183
S KQ LL E I D VT ++L C ++ +G + K VHG+ VK G
Sbjct: 410 --SPKQFQFLNLLHHLLNEAITLDSVTILSLLKFCINVQGIGKV--KEVHGYSVKAGLLH 465
Query: 184 -ELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVL-SWTALICG--------AAQWGF 233
E +LG L++ YAK G + A +F + ER L S+ +L+ G AQ F
Sbjct: 466 DEEEPKLGNALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLF 525
Query: 234 CE-----------------------EALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVE 270
E EA+ VF +++ G+RPN +T +L CA +
Sbjct: 526 TEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLH 585
Query: 271 EGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSAC 330
R+ I G+ + +L+ + K G L+ AY + ++ ++V+F + ++
Sbjct: 586 LVRQCHGYIIRGGL-GDIRLKGTLLDVYAKCGSLKHAYSVFQS-DARRDLVMFTAMVAGY 643
Query: 331 KEHKQFEMAERVIEQVLRM-VKPE 353
H + + A + + +KP+
Sbjct: 644 AVHGRGKEALMIYSHMTESNIKPD 667
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 95/218 (43%), Gaps = 11/218 (5%)
Query: 127 IGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELN 186
+G +Q + FR L G D V+ CA + L +G+++HG + K G
Sbjct: 1 MGPLRQFVQNFR---LLSGFGTDHRVFLDVVKACASVSDL--TSGRALHGCVFKLGHIAC 55
Query: 187 AELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICG-AAQWGFCEEALVVFEKMR 245
+E+ +++NMYAK + + +F M + + W ++ G + G E + F+ M
Sbjct: 56 SEVSKSVLNMYAKCRRMDDCQKMFRQMDSLDPVVWNIVLTGLSVSCG--RETMRFFKAMH 113
Query: 246 VAG-VRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRL 304
A +P+ +TF VL C G G+ I G+E +LV + K G +
Sbjct: 114 FADEPKPSSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFI 173
Query: 305 -EEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAER 341
+AY + + +VV + + ++ E+ A R
Sbjct: 174 FPDAYTAFDGI-ADKDVVSWNAIIAGFSENNMMADAFR 210
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 184 bits (467), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 102/296 (34%), Positives = 182/296 (61%), Gaps = 12/296 (4%)
Query: 87 NTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLF---RRVLLF 143
N I Y ++GD+ + ++FE+ ++ VS ++MI + G +++GL+ F RRV
Sbjct: 173 NAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRV--- 229
Query: 144 EGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVL 203
G +PDQ T AVL C MG + L G +HG I+ G+ N + L+++Y+K G L
Sbjct: 230 -GHEPDQATFLAVLRSCEDMGVVRLAQG--IHGLIMFGGFSGNKCITTALLDLYSKLGRL 286
Query: 204 RNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSAC 263
+++ VF + + ++WTA++ A GF +A+ FE M G+ P+ +TFT +L+AC
Sbjct: 287 EDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNAC 346
Query: 264 AHAGLVEEGRRYFK-MIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVV 322
+H+GLVEEG+ YF+ M + Y ++P++ HY+ +V L+G+SG L++AY +IK M +EP+ V
Sbjct: 347 SHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGV 406
Query: 323 FGSFLSACKEHKQFEMAERVIEQVLRMVKPEDDRGIYRLIHDLYVMGEKWEEAAKL 378
+G+ L AC+ +K ++ + E++ + +P D R Y ++ ++Y W++A+++
Sbjct: 407 WGALLGACRVYKDTQLGTKAAERLFEL-EPRDGRN-YVMLSNIYSASGLWKDASRI 460
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 134/275 (48%), Gaps = 11/275 (4%)
Query: 72 CILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSK 131
C + + R+ + ++ Y R G A ++F+E P+RD VS +S+IS Y+ G
Sbjct: 55 CKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGYLG 114
Query: 132 QGLSLFRRVLLFE-GIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELG 190
+ + R+++ E G +P++VT +++S C + GS G+ +HG ++K G ++
Sbjct: 115 KCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKE--EGRCIHGLVMKFGVLEEVKVV 172
Query: 191 ATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVR 250
+N Y K G L ++ +FE + +N++SW +I Q G E+ L F R G
Sbjct: 173 NAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHE 232
Query: 251 PNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEI 310
P++ TF VL +C G+V + +I G +L+ L K GRLE++ +
Sbjct: 233 PDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTV 292
Query: 311 IKTMKVEPNVVVFGSFLSACKEH-------KQFEM 338
+ P+ + + + L+A H K FE+
Sbjct: 293 FHEI-TSPDSMAWTAMLAAYATHGFGRDAIKHFEL 326
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 128/272 (47%), Gaps = 30/272 (11%)
Query: 120 MISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAG-----AVLSGCAHMGSLGLLAGKSV 174
MI A N+ S + L+RR L + + A A + C + LL K V
Sbjct: 1 MIKA--NVYSCSKFRFLYRRRFLSQSSFVHSLDANVSSLIAAVKSCVSIELCRLLHCKVV 58
Query: 175 HGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFC 234
++G+ +G LV Y + G A +F+ M ER+++SW +LI G + G+
Sbjct: 59 KSVSYRHGF-----IGDQLVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGYL 113
Query: 235 EEALVVFEKMRVA--GVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYA 292
+ V +M ++ G RPNE+TF ++SAC + G EEGR ++ +G+ +V
Sbjct: 114 GKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVN 173
Query: 293 SLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLS-------ACKEHKQFEMAERVIEQ 345
+ + GK+G L + ++ + + ++ N+V + + + A K F M+ RV +
Sbjct: 174 AFINWYGKTGDLTSSCKLFEDLSIK-NLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHE 232
Query: 346 -----VLRMVKPEDDRGIYRL---IHDLYVMG 369
L +++ +D G+ RL IH L + G
Sbjct: 233 PDQATFLAVLRSCEDMGVVRLAQGIHGLIMFG 264
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 184 bits (467), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 99/291 (34%), Positives = 185/291 (63%), Gaps = 5/291 (1%)
Query: 87 NTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGI 146
++++ Y++ G++ AR++F+E PQR+ V+ S M+ Y +G +++ L LF+ L FE +
Sbjct: 155 SSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEAL-FENL 213
Query: 147 KPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNA 206
+ + +V+S CA+ L L G+ +HG +K+ ++ ++ +G++LV++Y+K GV A
Sbjct: 214 AVNDYSFSSVISVCANSTLLEL--GRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGA 271
Query: 207 AMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHA 266
VF + +N+ W A++ AQ ++ + +F++M+++G++PN +TF VL+AC+HA
Sbjct: 272 YQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHA 331
Query: 267 GLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSF 326
GLV+EGR YF +++ +EP HYASLV ++G++GRL+EA E+I M ++P V+G+
Sbjct: 332 GLVDEGRYYFDQMKESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGAL 391
Query: 327 LSACKEHKQFEMAERVIEQVLRMVKPEDDRGIYRLIHDLYVMGEKWEEAAK 377
L++C HK E+A ++V + G++ + + Y ++E+AAK
Sbjct: 392 LTSCTVHKNTELAAFAADKVFELGPVSS--GMHISLSNAYAADGRFEDAAK 440
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 141/263 (53%), Gaps = 7/263 (2%)
Query: 87 NTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGI 146
N +I YS+S +R FE++PQ+ S + SS+IS + L ++ ++ +
Sbjct: 54 NNLINFYSKSQLPFDSRRAFEDSPQKSSTTWSSIISCFAQNELPWMSLEFLKK-MMAGNL 112
Query: 147 KPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNA 206
+PD + CA + + G+SVH +K G++ + +G++LV+MYAK G + A
Sbjct: 113 RPDDHVLPSATKSCAILSRCDI--GRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYA 170
Query: 207 AMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHA 266
+F+ M +RNV++W+ ++ G AQ G EEAL +F++ + N+ +F+ V+S CA++
Sbjct: 171 RKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVISVCANS 230
Query: 267 GLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSF 326
L+E GR+ + + +SLV L K G E AY++ + V+ N+ ++ +
Sbjct: 231 TLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVK-NLGIWNAM 289
Query: 327 LSACKEHKQFEMAERVIEQVLRM 349
L A +H ++VIE RM
Sbjct: 290 LKAYAQHSH---TQKVIELFKRM 309
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 184 bits (467), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 98/288 (34%), Positives = 168/288 (58%), Gaps = 6/288 (2%)
Query: 87 NTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGI 146
N ++ YSR G ++ + FE+ D+++ ++++S + G++++ L +F R + EGI
Sbjct: 630 NALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVR-MNREGI 688
Query: 147 KPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNA 206
+ T G+ + + ++ GK VH I K G++ E+ L++MYAK G + +A
Sbjct: 689 DNNNFTFGSAVKAASETANMK--QGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDA 746
Query: 207 AMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHA 266
F + +N +SW A+I ++ GF EAL F++M + VRPN +T GVLSAC+H
Sbjct: 747 EKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHI 806
Query: 267 GLVEEGRRYFK-MIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGS 325
GLV++G YF+ M +YG+ PK HY +V ++ ++G L A E I+ M ++P+ +V+ +
Sbjct: 807 GLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRT 866
Query: 326 FLSACKEHKQFEMAERVIEQVLRMVKPEDDRGIYRLIHDLYVMGEKWE 373
LSAC HK E+ E +L + +PED Y L+ +LY + +KW+
Sbjct: 867 LLSACVVHKNMEIGEFAAHHLLEL-EPEDS-ATYVLLSNLYAVSKKWD 912
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 95/349 (27%), Positives = 164/349 (46%), Gaps = 38/349 (10%)
Query: 1 MHLYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLL 60
M L+ ++H G+ DS + + +C++ +L Q LHA+ KLGFA + + LL
Sbjct: 374 MELFKRMHLDGLEPDSNTLASLVVACSAD-GTLFRGQQLHAYTTKLGFASNN-KIEGALL 431
Query: 61 NAYVLLSFLDACI-LFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSS 119
N Y + ++ + F E N V WN M+V Y D++ + +F
Sbjct: 432 NLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIF------------- 478
Query: 120 MISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIV 179
R + E I P+Q T ++L C +G L L G+ +H I+
Sbjct: 479 -------------------RQMQIEEIVPNQYTYPSILKTCIRLGDLEL--GEQIHSQII 517
Query: 180 KNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALV 239
K ++LNA + + L++MYAK G L A + ++V+SWT +I G Q+ F ++AL
Sbjct: 518 KTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALT 577
Query: 240 VFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVG 299
F +M G+R +E+ T +SACA ++EG++ G + +LV L
Sbjct: 578 TFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYS 637
Query: 300 KSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLR 348
+ G++EE+Y + + N + + + +S ++ E A RV ++ R
Sbjct: 638 RCGKIEESYLAFEQTEAGDN-IAWNALVSGFQQSGNNEEALRVFVRMNR 685
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 78/358 (21%), Positives = 162/358 (45%), Gaps = 43/358 (12%)
Query: 1 MHLYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLL 60
+ L+ ++ G+ + L +C + SL I + LH ++KLGF+ + +V N L+
Sbjct: 273 IRLFCDMYVLGIMPTPYAFSSVLSACKK-IESLEIGEQLHGLVLKLGFS-SDTYVCNALV 330
Query: 61 NAYVLLSFLDACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSM 120
+ Y L G++ A +F QRD+V+ +++
Sbjct: 331 SLYFHL------------------------------GNLISAEHIFSNMSQRDAVTYNTL 360
Query: 121 ISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVK 180
I+ + G ++ + LF+R+ L +G++PD T +++ C+ G+L G+ +H + K
Sbjct: 361 INGLSQCGYGEKAMELFKRMHL-DGLEPDSNTLASLVVACSADGTL--FRGQQLHAYTTK 417
Query: 181 NGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVV 240
G+ N ++ L+N+YAK + A F NV+ W ++ + +
Sbjct: 418 LGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRI 477
Query: 241 FEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGK 300
F +M++ + PN+ T+ +L C G +E G + I + + + L+ + K
Sbjct: 478 FRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAK 537
Query: 301 SGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPEDDRGI 358
G+L+ A++I+ +VV + + ++ + Q+ ++ + +M+ DRGI
Sbjct: 538 LGKLDTAWDILIRF-AGKDVVSWTTMIAG---YTQYNFDDKALTTFRQML----DRGI 587
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 154/321 (47%), Gaps = 38/321 (11%)
Query: 62 AYVLLSFLDACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMI 121
A+ ++ + A IL+ + + +TV N +I YSR+G V AR VF+ +D S +MI
Sbjct: 202 AFDVVEQIHARILYQGLRD-STVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMI 260
Query: 122 SAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKN 181
S + + + LF + + GI P +VLS C + SL + G+ +HG ++K
Sbjct: 261 SGLSKNECEAEAIRLFCDMYVL-GIMPTPYAFSSVLSACKKIESLEI--GEQLHGLVLKL 317
Query: 182 GWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVF 241
G+ + + LV++Y G L +A +F M +R+ +++ LI G +Q G+ E+A+ +F
Sbjct: 318 GFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELF 377
Query: 242 EKMRVAGVRPNELTFTGVLSACAHAGLVEEGRR-----------------------YFKM 278
++M + G+ P+ T ++ AC+ G + G++ Y K
Sbjct: 378 KRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKC 437
Query: 279 IE-----DYGMEPKVHH---YASLVYLVGKSGRLEEAYEIIKTMKVE---PNVVVFGSFL 327
+ DY +E +V + + ++ G L ++ I + M++E PN + S L
Sbjct: 438 ADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSIL 497
Query: 328 SACKEHKQFEMAERVIEQVLR 348
C E+ E++ Q+++
Sbjct: 498 KTCIRLGDLELGEQIHSQIIK 518
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 138/311 (44%), Gaps = 36/311 (11%)
Query: 23 LKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLLNAYVLLSFLDACILFDEMPNRN 82
LK+C L L + + +H+ IIK F LNAYV +D
Sbjct: 497 LKTCI-RLGDLELGEQIHSQIIKTNFQ----------LNAYVCSVLIDM----------- 534
Query: 83 TVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLL 142
Y++ G + A ++ +D VS ++MI+ Y + L+ FR+ +L
Sbjct: 535 ----------YAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQ-ML 583
Query: 143 FEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGV 202
GI+ D+V +S CA G L G+ +H +G+ + LV +Y++ G
Sbjct: 584 DRGIRSDEVGLTNAVSACA--GLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGK 641
Query: 203 LRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSA 262
+ + + FE + ++W AL+ G Q G EEAL VF +M G+ N TF + A
Sbjct: 642 IEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKA 701
Query: 263 CAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVV 322
+ +++G++ +I G + + +L+ + K G + +A + + + N V
Sbjct: 702 ASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTK-NEVS 760
Query: 323 FGSFLSACKEH 333
+ + ++A +H
Sbjct: 761 WNAIINAYSKH 771
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 118/258 (45%), Gaps = 8/258 (3%)
Query: 93 YSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVT 152
Y GD+ A +VF+E P+R + + MI + + LF R ++ E + P++ T
Sbjct: 130 YLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVR-MVSENVTPNEGT 188
Query: 153 AGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFEL 212
VL C GS+ + +H I+ G + + L+++Y++ G + A VF+
Sbjct: 189 FSGVLEAC-RGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDG 247
Query: 213 MVERNVLSWTALICGAAQWGFCE-EALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEE 271
+ ++ SW A+I G ++ CE EA+ +F M V G+ P F+ VLSAC +E
Sbjct: 248 LRLKDHSSWVAMISGLSK-NECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEI 306
Query: 272 GRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSACK 331
G + ++ G + +LV L G L A I M + + V + + ++
Sbjct: 307 GEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMS-QRDAVTYNTLINGL- 364
Query: 332 EHKQFEMAERVIEQVLRM 349
Q E+ +E RM
Sbjct: 365 --SQCGYGEKAMELFKRM 380
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 101/248 (40%), Gaps = 52/248 (20%)
Query: 145 GIKPDQVTAGAVLSGCAHM-GSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVL 203
GI+P+ T +L GC GSL G+ +H I+K G + N L L + Y G L
Sbjct: 79 GIRPNHQTLKWLLEGCLKTNGSLD--EGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDL 136
Query: 204 RNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSAC 263
A VF+ M ER + +W +I A E +F +M V PNE TF+GVL AC
Sbjct: 137 YGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEAC 196
Query: 264 ------------------------------------AHAGLVEEGRRYFKMIEDYGMEPK 287
+ G V+ RR F G+ K
Sbjct: 197 RGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFD-----GLRLK 251
Query: 288 VHHYASLVYLVGKSGRLEEAYEIIK------TMKVEPNVVVFGSFLSACKEHKQFEMAER 341
H +S V ++ + E E I+ + + P F S LSACK+ + E+ E+
Sbjct: 252 DH--SSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQ 309
Query: 342 VIEQVLRM 349
+ VL++
Sbjct: 310 LHGLVLKL 317
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 98/230 (42%), Gaps = 43/230 (18%)
Query: 1 MHLYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLL 60
+ ++ +++R G+ ++F +K+ S ++ + +HA I K G+ + V N L+
Sbjct: 677 LRVFVRMNREGIDNNNFTFGSAVKA-ASETANMKQGKQVHAVITKTGY-DSETEVCNALI 734
Query: 61 NAYVLL-SFLDACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSS 119
+ Y S DA F E+ +N V+WN +I YS+ G A + F++
Sbjct: 735 SMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQ----------- 783
Query: 120 MISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIV 179
++ ++P+ VT VLS C+H+G L K + F
Sbjct: 784 ---------------------MIHSNVRPNHVTLVGVLSACSHIG----LVDKGIAYFES 818
Query: 180 KN---GWELNAELGATLVNMYAKGGVL-RNAAMVFELMVERNVLSWTALI 225
N G E +V+M + G+L R + E+ ++ + L W L+
Sbjct: 819 MNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLL 868
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 184 bits (467), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 102/294 (34%), Positives = 173/294 (58%), Gaps = 6/294 (2%)
Query: 74 LFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQG 133
LF++MP ++ V+W MI G+S G++ + E+F P++D+++ ++MISA+ + G ++
Sbjct: 363 LFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNITWTAMISAFVSNGYYEEA 422
Query: 134 LSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATL 193
L F ++L E + P+ T +VLS A + L + G +HG +VK + + +L
Sbjct: 423 LCWFHKMLQKE-VCPNSYTFSSVLSATASLADL--IEGLQIHGRVVKMNIVNDLSVQNSL 479
Query: 194 VNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNE 253
V+MY K G +A +F + E N++S+ +I G + GF ++AL +F + +G PN
Sbjct: 480 VSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNG 539
Query: 254 LTFTGVLSACAHAGLVEEGRRYFK-MIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIK 312
+TF +LSAC H G V+ G +YFK M Y +EP HYA +V L+G+SG L++A +I
Sbjct: 540 VTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYACMVDLLGRSGLLDDASNLIS 599
Query: 313 TMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPEDDRGIYRLIHDLY 366
TM +P+ V+GS LSA K H + ++AE ++++ + D Y ++ LY
Sbjct: 600 TMPCKPHSGVWGSLLSASKTHLRVDLAELAAKKLIEL--EPDSATPYVVLSQLY 651
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 136/277 (49%), Gaps = 16/277 (5%)
Query: 74 LFDEMPNRNTVTWNTMIVGYSRSG-DVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQ 132
+FDEMP R T ++N MI ++ D+ +A E+F + P++++VS ++MI+ + G +
Sbjct: 103 VFDEMPVRVTTSYNAMITAMIKNKCDLGKAYELFCDIPEKNAVSYATMITGFVRAGRFDE 162
Query: 133 GLSLFRRV-LLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELG- 190
L+ + F D V + +LSG L AGK V G + +
Sbjct: 163 AEFLYAETPVKFR----DSVASNVLLSGY-------LRAGKWNEAVRVFQGMAVKEVVSC 211
Query: 191 ATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAG-V 249
+++V+ Y K G + +A +F+ M ERNV++WTA+I G + GF E+ +F +MR G V
Sbjct: 212 SSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDV 271
Query: 250 RPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYE 309
+ N T + AC EG + ++ +E + SL+ + K G + EA
Sbjct: 272 KVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKA 331
Query: 310 IIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQV 346
+ MK + V + S ++ + KQ A + E++
Sbjct: 332 VFGVMK-NKDSVSWNSLITGLVQRKQISEAYELFEKM 367
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 135/280 (48%), Gaps = 18/280 (6%)
Query: 56 ANCLLNAYVLL-SFLDACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDS 114
+N LL+ Y+ + +A +F M + V+ ++M+ GY + G + AR +F+ +R+
Sbjct: 180 SNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTERNV 239
Query: 115 VSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSV 174
++ ++MI Y G + G LF R+ +K + T + C + G +
Sbjct: 240 ITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDF--VRYREGSQI 297
Query: 175 HGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFC 234
HG + + E + LG +L++MY+K G + A VF +M ++ +SW +LI G Q
Sbjct: 298 HGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQI 357
Query: 235 EEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHH--YA 292
EA +FEKM + +++T ++ + G + K +E +GM P+ + +
Sbjct: 358 SEAYELFEKMP----GKDMVSWTDMIKGFSGKGEIS------KCVELFGMMPEKDNITWT 407
Query: 293 SLVYLVGKSGRLEEA---YEIIKTMKVEPNVVVFGSFLSA 329
+++ +G EEA + + +V PN F S LSA
Sbjct: 408 AMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSA 447
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 184 bits (466), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 97/294 (32%), Positives = 168/294 (57%), Gaps = 8/294 (2%)
Query: 87 NTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGI 146
NT+I Y++ G + A F E +D +S +S+I+ ++ LF + GI
Sbjct: 347 NTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHE-MRTSGI 405
Query: 147 KPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNA 206
+PD T VL+ C+H+ +LG G S HG+ V +G+ +N + L++MY K G L A
Sbjct: 406 RPDITTLLGVLTACSHLAALG--HGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVA 463
Query: 207 AMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHA 266
VF+ M +R+++SW ++ G G +EAL +F M+ GV P+E+T +LSAC+H+
Sbjct: 464 KRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSACSHS 523
Query: 267 GLVEEGRRYFKMIE--DYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFG 324
GLV+EG++ F + D+ + P++ HY + L+ ++G L+EAY+ + M EP++ V G
Sbjct: 524 GLVDEGKQLFNSMSRGDFNVIPRIDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLG 583
Query: 325 SFLSACKEHKQFEMAERVIEQVLRMVKPEDDRGIYRLIHDLYVMGEKWEEAAKL 378
+ LSAC +K E+ V +++ + + + L+ + Y E+WE+AA++
Sbjct: 584 TLLSACWTYKNAELGNEVSKKMQSLGETTES---LVLLSNTYSAAERWEDAARI 634
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/350 (22%), Positives = 159/350 (45%), Gaps = 41/350 (11%)
Query: 1 MHLYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLL 60
+ LY K+ +GV + F LK+C L ++ + +H+H+ FA T ++V L+
Sbjct: 88 LDLYYKMLNSGVRPTKYTYPFVLKACAG-LRAIDDGKLIHSHVNCSDFA-TDMYVCTALV 145
Query: 61 NAYVLLSFLDACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSM 120
+ Y ++ G+++ A +VF+E P+RD V+ ++M
Sbjct: 146 DFY------------------------------AKCGELEMAIKVFDEMPKRDMVAWNAM 175
Query: 121 ISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVK 180
IS ++ + LF + +G+ P+ T + G+L GK+VHG+ +
Sbjct: 176 ISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALR--EGKAVHGYCTR 233
Query: 181 NGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVV 240
G+ + + ++++YAK + A VF+L ++N ++W+A+I G + +EA V
Sbjct: 234 MGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEV 293
Query: 241 FEKM----RVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVY 296
F +M VA V P + +L CA G + GR G + +++
Sbjct: 294 FFQMLVNDNVAMVTPVAIGL--ILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIIS 351
Query: 297 LVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQV 346
K G L +A+ + ++ +V+ + S ++ C + + E + R+ ++
Sbjct: 352 FYAKYGSLCDAFRQFSEIGLK-DVISYNSLITGCVVNCRPEESFRLFHEM 400
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 134/282 (47%), Gaps = 16/282 (5%)
Query: 83 TVTWNTMIVG----YSRSGDVQRAREVFEEAPQR--DSVSLSSMISAYNNIGSSKQGLSL 136
T++ +T++V Y+ +V+ AR VF+E P + ++ MI AY + +++ L L
Sbjct: 31 TLSSSTVLVNLTRLYASCNEVELARHVFDEIPHPRINPIAWDLMIRAYASNDFAEKALDL 90
Query: 137 FRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNM 196
+ + +L G++P + T VL CA + ++ GK +H + + + + + LV+
Sbjct: 91 YYK-MLNSGVRPTKYTYPFVLKACAGLRAID--DGKLIHSHVNCSDFATDMYVCTALVDF 147
Query: 197 YAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKM-RVAGVRPNELT 255
YAK G L A VF+ M +R++++W A+I G + + + +F M R+ G+ PN T
Sbjct: 148 YAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLST 207
Query: 256 FTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMK 315
G+ A AG + EG+ G + ++ + KS + A + +
Sbjct: 208 IVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFD-LD 266
Query: 316 VEPNVVVFGSFLSACKEHKQFEMAERVIEQVL-----RMVKP 352
+ N V + + + E++ + A V Q+L MV P
Sbjct: 267 FKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTP 308
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 82 NTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVL 141
NT N ++ Y++ G + A+ VF+ +RD VS ++M+ + G K+ LSLF +
Sbjct: 443 NTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNS-M 501
Query: 142 LFEGIKPDQVTAGAVLSGCAHMG 164
G+ PD+VT A+LS C+H G
Sbjct: 502 QETGVNPDEVTLLAILSACSHSG 524
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 79/173 (45%), Gaps = 7/173 (4%)
Query: 165 SLGLLAGKSVHGFIVKNGWELNAE-LGATLVNMYAKGGVLRNAAMVFELMVER--NVLSW 221
S L+ G+ +H ++K L++ + L +YA + A VF+ + N ++W
Sbjct: 12 SRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEIPHPRINPIAW 71
Query: 222 TALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIED 281
+I A F E+AL ++ KM +GVRP + T+ VL ACA +++G+ +
Sbjct: 72 DLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDGKLIHSHVNC 131
Query: 282 YGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMK----VEPNVVVFGSFLSAC 330
++ +LV K G LE A ++ M V N ++ G L C
Sbjct: 132 SDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHCC 184
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 183 bits (465), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 111/307 (36%), Positives = 179/307 (58%), Gaps = 18/307 (5%)
Query: 87 NTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAY---NNIGS--SKQGLSLFRRV- 140
T++ Y+++GD++ AR+VF+E P+R SV+ ++MI Y + G+ +++ + LFRR
Sbjct: 151 TTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYCSHKDKGNHNARKAMVLFRRFS 210
Query: 141 LLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGW--ELNAELGATLVNMYA 198
G++P T VLS + G L + G VHG+I K G+ E++ +G LV+MY+
Sbjct: 211 CCGSGVRPTDTTMVCVLSAISQTGLLEI--GSLVHGYIEKLGFTPEVDVFIGTALVDMYS 268
Query: 199 KGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTG 258
K G L NA VFELM +NV +WT++ G A G E + +M +G++PNE+TFT
Sbjct: 269 KCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETPNLLNRMAESGIKPNEITFTS 328
Query: 259 VLSACAHAGLVEEGRRYFK-MIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVE 317
+LSA H GLVEEG FK M +G+ P + HY +V L+GK+GR++EAY+ I M ++
Sbjct: 329 LLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIVDLLGKAGRIQEAYQFILAMPIK 388
Query: 318 PNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPEDDR------GIYRLIHDLYVMGEK 371
P+ ++ S +AC + + M E + + +L ++ ED++ Y + ++ K
Sbjct: 389 PDAILLRSLCNACSIYGETVMGEEIGKALLE-IEREDEKLSGSECEDYVALSNVLAHKGK 447
Query: 372 WEEAAKL 378
W E KL
Sbjct: 448 WVEVEKL 454
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 62/168 (36%), Positives = 89/168 (52%), Gaps = 11/168 (6%)
Query: 168 LLAGKSVHGFIVKNGWELNAEL-GATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALI- 225
L G+ VHG + K G+ +EL G TL++ YAK G LR A VF+ M ER ++W A+I
Sbjct: 127 LRVGRIVHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIG 186
Query: 226 --CGAAQWG--FCEEALVVFEKMRV--AGVRPNELTFTGVLSACAHAGLVEEGRRYFKMI 279
C G +A+V+F + +GVRP + T VLSA + GL+E G I
Sbjct: 187 GYCSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYI 246
Query: 280 EDYGMEPKVHHY--ASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGS 325
E G P+V + +LV + K G L A+ + + MKV+ NV + S
Sbjct: 247 EKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVK-NVFTWTS 293
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 183 bits (465), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 114/380 (30%), Positives = 199/380 (52%), Gaps = 40/380 (10%)
Query: 1 MHLYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLL 60
M ++ K+ GV ++ L +C + L L + +H ++LG ++ V N L+
Sbjct: 322 MLIFQKMLDEGVKPTDVSVMGALHAC-ADLGDLERGRFIHKLSVELGL-DRNVSVVNSLI 379
Query: 61 NAYVLLSFLD-ACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSS 119
+ Y +D A +F ++ +R V+WN MI+G++++G A F + R
Sbjct: 380 SMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRT------ 433
Query: 120 MISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIV 179
+KPD T +V++ A + K +HG ++
Sbjct: 434 --------------------------VKPDTFTYVSVITAIAELSITH--HAKWIHGVVM 465
Query: 180 KNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALV 239
++ + N + LV+MYAK G + A ++F++M ER+V +W A+I G GF + AL
Sbjct: 466 RSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALE 525
Query: 240 VFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMI-EDYGMEPKVHHYASLVYLV 298
+FE+M+ ++PN +TF V+SAC+H+GLVE G + F M+ E+Y +E + HY ++V L+
Sbjct: 526 LFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLL 585
Query: 299 GKSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPEDDRGI 358
G++GRL EA++ I M V+P V V+G+ L AC+ HK AE+ E++ + DD G
Sbjct: 586 GRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFEL--NPDDGGY 643
Query: 359 YRLIHDLYVMGEKWEEAAKL 378
+ L+ ++Y WE+ ++
Sbjct: 644 HVLLANIYRAASMWEKVGQV 663
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 138/261 (52%), Gaps = 3/261 (1%)
Query: 93 YSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVT 152
Y++ V AR+VF+ P+RD VS +++++ Y+ G ++ L + + + E +KP +T
Sbjct: 180 YAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKS-MCEENLKPSFIT 238
Query: 153 AGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFEL 212
+VL + + + + GK +HG+ +++G++ + LV+MYAK G L A +F+
Sbjct: 239 IVSVLPAVSALRLISV--GKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDG 296
Query: 213 MVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEG 272
M+ERNV+SW ++I Q +EA+++F+KM GV+P +++ G L ACA G +E G
Sbjct: 297 MLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERG 356
Query: 273 RRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKE 332
R K+ + G++ V SL+ + K ++ A + ++ V L +
Sbjct: 357 RFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQN 416
Query: 333 HKQFEMAERVIEQVLRMVKPE 353
+ + + R VKP+
Sbjct: 417 GRPIDALNYFSQMRSRTVKPD 437
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 142/279 (50%), Gaps = 9/279 (3%)
Query: 75 FDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGL 134
FD + N +T ++ Y++ G ++ AR++F+ +R+ VS +SMI AY + K+ +
Sbjct: 267 FDSLVNIST----ALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAM 322
Query: 135 SLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLV 194
+F++ +L EG+KP V+ L CA +G L G+ +H V+ G + N + +L+
Sbjct: 323 LIFQK-MLDEGVKPTDVSVMGALHACADLGDLE--RGRFIHKLSVELGLDRNVSVVNSLI 379
Query: 195 NMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNEL 254
+MY K + AA +F + R ++SW A+I G AQ G +AL F +MR V+P+
Sbjct: 380 SMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTF 439
Query: 255 TFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTM 314
T+ V++A A + + ++ ++ V +LV + K G + A +I M
Sbjct: 440 TYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIA-RLIFDM 498
Query: 315 KVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLR-MVKP 352
E +V + + + H + A + E++ + +KP
Sbjct: 499 MSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKP 537
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 127/263 (48%), Gaps = 5/263 (1%)
Query: 93 YSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVT 152
+ R G V A VFE + +V +M+ + + + L F R + ++ ++P
Sbjct: 79 FCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVR-MRYDDVEPVVYN 137
Query: 153 AGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFEL 212
+L C L + GK +HG +VK+G+ L+ L NMYAK + A VF+
Sbjct: 138 FTYLLKVCGDEAELRV--GKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDR 195
Query: 213 MVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEG 272
M ER+++SW ++ G +Q G AL + + M ++P+ +T VL A + L+ G
Sbjct: 196 MPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVG 255
Query: 273 RRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKE 332
+ G + V+ +LV + K G LE A ++ M +E NVV + S + A +
Sbjct: 256 KEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGM-LERNVVSWNSMIDAYVQ 314
Query: 333 HKQFEMAERVIEQVL-RMVKPED 354
++ + A + +++L VKP D
Sbjct: 315 NENPKEAMLIFQKMLDEGVKPTD 337
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 183 bits (465), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 102/292 (34%), Positives = 168/292 (57%), Gaps = 5/292 (1%)
Query: 87 NTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGI 146
+ +++ Y G + AR++F++ P RDSV ++M Y G + GL++FR + + G
Sbjct: 173 SALVIMYVDMGKLLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFRE-MGYSGF 231
Query: 147 KPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNA 206
D V ++L C +G+L GKSVHG+ ++ L LG + +MY K +L A
Sbjct: 232 ALDSVVMVSLLMACGQLGALK--HGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYA 289
Query: 207 AMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHA 266
VF M R+V+SW++LI G G + +F++M G+ PN +TF GVLSACAH
Sbjct: 290 HTVFVNMSRRDVISWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAHG 349
Query: 267 GLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSF 326
GLVE+ YF+++++Y + P++ HYAS+ + ++G LEEA + ++ M V+P+ V G+
Sbjct: 350 GLVEKSWLYFRLMQEYNIVPELKHYASVADCMSRAGLLEEAEKFLEDMPVKPDEAVMGAV 409
Query: 327 LSACKEHKQFEMAERVIEQVLRMVKPEDDRGIYRLIHDLYVMGEKWEEAAKL 378
LS CK + E+ ERV +++++ KP Y + LY +++EA L
Sbjct: 410 LSGCKVYGNVEVGERVARELIQL-KPR-KASYYVTLAGLYSAAGRFDEAESL 459
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 120/284 (42%), Gaps = 37/284 (13%)
Query: 82 NTVTWNTMIVGYSRSGDV-QRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRV 140
N V + +++ YS+ + + VF P R+ S + +I ++ G + + + LF R+
Sbjct: 65 NVVLSSKLVLAYSKLNHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRM 124
Query: 141 LLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKG 200
++PD T +L C+ S +G +H +K G+ + + + LV MY
Sbjct: 125 WRESCVRPDDFTLPLILRACS--ASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDM 182
Query: 201 GVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVL 260
G L +A +F+ M R+ + +TA+ G Q G L +F +M +G + + +L
Sbjct: 183 GKLLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLL 242
Query: 261 SACAHAGLVEEGRR-----------------------YFKM-IEDYG-------MEPKVH 289
AC G ++ G+ Y K I DY V
Sbjct: 243 MACGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMSRRDVI 302
Query: 290 HYASLVYLVGKSGRLEEAYEIIKTM---KVEPNVVVFGSFLSAC 330
++SL+ G G + ++++ M +EPN V F LSAC
Sbjct: 303 SWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSAC 346
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 182 bits (463), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 108/298 (36%), Positives = 174/298 (58%), Gaps = 6/298 (2%)
Query: 82 NTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVL 141
N +++I YS+ G + A +VF + V+ +SMIS Y+ + + LF ++
Sbjct: 510 NVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFN-LM 568
Query: 142 LFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGG 201
L +GI PD V+ +VL + SL L GKS+HG+ ++ G + L L++MY K G
Sbjct: 569 LSQGIFPDSVSITSVLVAISSTASL--LKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCG 626
Query: 202 VLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLS 261
+ A +F+ M +++++W +I G G C AL +F++M+ AG P+++TF ++S
Sbjct: 627 FSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLIS 686
Query: 262 ACAHAGLVEEGRRYFK-MIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNV 320
AC H+G VEEG+ F+ M +DYG+EP + HYA++V L+G++G LEEAY IK M +E +
Sbjct: 687 ACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADS 746
Query: 321 VVFGSFLSACKEHKQFEMAERVIEQVLRMVKPEDDRGIYRLIHDLYVMGEKWEEAAKL 378
++ LSA + H E+ E++LRM +PE +LI +LY+ EAAKL
Sbjct: 747 SIWLCLLSASRTHHNVELGILSAEKLLRM-EPERGSTYVQLI-NLYMEAGLKNEAAKL 802
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 97/337 (28%), Positives = 163/337 (48%), Gaps = 33/337 (9%)
Query: 1 MHLYSKLHRTGVPFDSFCIVFT--LKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANC 58
+HLYSK H PF + F LK+C S L +L+ + +H ++ LG+ +A
Sbjct: 44 LHLYSK-HDGSSPFWTSVFTFPSLLKAC-SALTNLSYGKTIHGSVVVLGWRYDPF-IATS 100
Query: 59 LLNAYVLLSFLD-ACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSL 117
L+N YV FLD A +FD G+S+S AR+V
Sbjct: 101 LVNMYVKCGFLDYAVQVFD---------------GWSQSQSGVSARDV---------TVW 136
Query: 118 SSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGF 177
+SMI Y K+G+ FRR+L+F G++PD + V+S G+ GK +HGF
Sbjct: 137 NSMIDGYFKFRRFKEGVGCFRRMLVF-GVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGF 195
Query: 178 IVKNGWELNAELGATLVNMYAKGGVLRNAAMVF-ELMVERNVLSWTALICGAAQWGFCEE 236
+++N + ++ L L++MY K G+ +A VF E+ + NV+ W +I G G CE
Sbjct: 196 MLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICES 255
Query: 237 ALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVY 296
+L ++ + V+ +FTG L AC+ + GR+ + G+ + SL+
Sbjct: 256 SLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLS 315
Query: 297 LVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEH 333
+ K G + EA E + + V+ + ++ + ++A E+
Sbjct: 316 MYSKCGMVGEA-ETVFSCVVDKRLEIWNAMVAAYAEN 351
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 144/329 (43%), Gaps = 39/329 (11%)
Query: 1 MHLYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLL 60
+ L+ + + V DSF + + SC S L + +HA + K T + + LL
Sbjct: 358 LDLFGFMRQKSVLPDSFTLSNVI-SCCSVLGLYNYGKSVHAELFKRPIQSTST-IESALL 415
Query: 61 NAYVLLSF-LDACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSS 119
Y DA ++F M ++ V W ++I G ++G + A +VF + D
Sbjct: 416 TLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDD------ 469
Query: 120 MISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIV 179
+ +KPD +V + CA + +L G VHG ++
Sbjct: 470 ------------------------DSLKPDSDIMTSVTNACAGLEALRF--GLQVHGSMI 503
Query: 180 KNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALV 239
K G LN +G++L+++Y+K G+ A VF M N+++W ++I ++ E ++
Sbjct: 504 KTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSID 563
Query: 240 VFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVG 299
+F M G+ P+ ++ T VL A + + +G+ G+ H +L+ +
Sbjct: 564 LFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYV 623
Query: 300 KSGRLEEAYEIIKTMK----VEPNVVVFG 324
K G + A I K M+ + N++++G
Sbjct: 624 KCGFSKYAENIFKKMQHKSLITWNLMIYG 652
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 134/288 (46%), Gaps = 40/288 (13%)
Query: 69 LDACILFDEMPNR-NTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNI 127
+DA +F E+ ++ N V WN MIVG+ SG + + +++ A + +SV L S
Sbjct: 222 IDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLA-KNNSVKLVS-------- 272
Query: 128 GSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNA 187
+ L C+ + G G+ +H +VK G +
Sbjct: 273 -----------------------TSFTGALGACSQSENSGF--GRQIHCDVVKMGLHNDP 307
Query: 188 ELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVA 247
+ +L++MY+K G++ A VF +V++ + W A++ A+ + AL +F MR
Sbjct: 308 YVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQK 367
Query: 248 GVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEA 307
V P+ T + V+S C+ GL G+ + ++ ++L+ L K G +A
Sbjct: 368 SVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDA 427
Query: 308 YEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPEDD 355
Y + K+M+ E ++V +GS +S ++ +F+ A +V +K +DD
Sbjct: 428 YLVFKSME-EKDMVAWGSLISGLCKNGKFKEALKVFGD----MKDDDD 470
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 126/257 (49%), Gaps = 10/257 (3%)
Query: 87 NTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAY--NNIGSSKQGLSLFRRVLLFE 144
+++ YS+ G V A VF + ++M++AY N+ G S L F R +
Sbjct: 311 TSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQ---K 367
Query: 145 GIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLR 204
+ PD T V+S C+ +G GKSVH + K + + + + L+ +Y+K G
Sbjct: 368 SVLPDSFTLSNVISCCSVLGLYNY--GKSVHAELFKRPIQSTSTIESALLTLYSKCGCDP 425
Query: 205 NAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMR--VAGVRPNELTFTGVLSA 262
+A +VF+ M E+++++W +LI G + G +EAL VF M+ ++P+ T V +A
Sbjct: 426 DAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNA 485
Query: 263 CAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVV 322
CA + G + + G+ V +SL+ L K G E A ++ +M E N+V
Sbjct: 486 CAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTE-NMVA 544
Query: 323 FGSFLSACKEHKQFEMA 339
+ S +S + E++
Sbjct: 545 WNSMISCYSRNNLPELS 561
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 82/154 (53%), Gaps = 7/154 (4%)
Query: 1 MHLYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLL 60
+ L++ + G+ DS I L + +S SL + LH + ++LG P+ H+ N L+
Sbjct: 562 IDLFNLMLSQGIFPDSVSITSVLVAISS-TASLLKGKSLHGYTLRLGI-PSDTHLKNALI 619
Query: 61 NAYVLLSFLD-ACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQR----DSV 115
+ YV F A +F +M +++ +TWN MI GY GD A +F+E + D V
Sbjct: 620 DMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDV 679
Query: 116 SLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPD 149
+ S+ISA N+ G ++G ++F + GI+P+
Sbjct: 680 TFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPN 713
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 182 bits (462), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 103/288 (35%), Positives = 162/288 (56%), Gaps = 6/288 (2%)
Query: 93 YSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVT 152
Y + + A VF P++D VS ++IS + G + + + F +LL +PD +
Sbjct: 309 YMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAIL 368
Query: 153 AGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFEL 212
VL C+ +G L K H +++K G++ N +GA+LV +Y++ G L NA+ VF
Sbjct: 369 MVKVLGSCSELGFLE--QAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNG 426
Query: 213 MVERNVLSWTALICGAAQWGFCEEALVVFEKM-RVAGVRPNELTFTGVLSACAHAGLVEE 271
+ ++ + WT+LI G G +AL F M + + V+PNE+TF +LSAC+HAGL+ E
Sbjct: 427 IALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHE 486
Query: 272 GRRYFK-MIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSAC 330
G R FK M+ DY + P + HYA LV L+G+ G L+ A EI K M P + G+ L AC
Sbjct: 487 GLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGAC 546
Query: 331 KEHKQFEMAERVIEQVLRMVKPEDDRGIYRLIHDLYVMGEKWEEAAKL 378
+ H+ EMAE V +++ + + G Y L+ ++Y + +WE KL
Sbjct: 547 RIHQNGEMAETVAKKLFEL--ESNHAGYYMLMSNVYGVKGEWENVEKL 592
Score = 135 bits (340), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 85/270 (31%), Positives = 144/270 (53%), Gaps = 6/270 (2%)
Query: 87 NTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGI 146
+++I Y + G + A +F+E + D V+ SSM+S + GS Q + FRR+++ +
Sbjct: 100 SSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDV 159
Query: 147 KPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNA 206
PD+VT ++S C + + L G+ VHGF+++ G+ + L +L+N YAK + A
Sbjct: 160 TPDRVTLITLVSACTKLSNSRL--GRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEA 217
Query: 207 AMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHA 266
+F+++ E++V+SW+ +I Q G EAL+VF M G PN T VL ACA A
Sbjct: 218 VNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAA 277
Query: 267 GLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSF 326
+E+GR+ ++ G+E +V +LV + K EEAY + + +VV + +
Sbjct: 278 HDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIP-RKDVVSWVAL 336
Query: 327 LSACKEHKQFEMAERVIEQVLRMVKPEDDR 356
+S + MA R IE+ M+ + R
Sbjct: 337 ISGFTLNG---MAHRSIEEFSIMLLENNTR 363
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 182 bits (461), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 103/307 (33%), Positives = 179/307 (58%), Gaps = 12/307 (3%)
Query: 75 FDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNN---IGSSK 131
F E N + ++ Y+ G ++ AR +FE + D + +++++AY N I S +
Sbjct: 142 FLEPVNHDRFVQAALVGFYANCGKLREARSLFERIREPDLATWNTLLAAYANSEEIDSDE 201
Query: 132 QGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGA 191
+ L LF R+ ++P++++ A++ CA++G + G H +++KN LN +G
Sbjct: 202 EVLLLFMRM----QVRPNELSLVALIKSCANLGEF--VRGVWAHVYVLKNNLTLNQFVGT 255
Query: 192 TLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRP 251
+L+++Y+K G L A VF+ M +R+V + A+I G A GF +E + +++ + G+ P
Sbjct: 256 SLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVP 315
Query: 252 NELTFTGVLSACAHAGLVEEGRRYFKMIED-YGMEPKVHHYASLVYLVGKSGRLEEAYEI 310
+ TF +SAC+H+GLV+EG + F ++ YG+EPKV HY LV L+G+SGRLEEA E
Sbjct: 316 DSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEAEEC 375
Query: 311 IKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPEDDRGIYRLIHDLYVMGE 370
IK M V+PN ++ SFL + + H FE E ++ +L + ++ G Y L+ ++Y
Sbjct: 376 IKKMPVKPNATLWRSFLGSSQTHGDFERGEIALKHLLGL--EFENSGNYVLLSNIYAGVN 433
Query: 371 KWEEAAK 377
+W + K
Sbjct: 434 RWTDVEK 440
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 181 bits (459), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 116/381 (30%), Positives = 203/381 (53%), Gaps = 41/381 (10%)
Query: 1 MHLYSKLHRTG-VPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCL 59
++L+S++ G V + F K+C +L + + + K G A ++ VAN +
Sbjct: 357 INLFSEMITQGHVEPNHFTFSSAFKAC-GNLSDPRVGKQVLGQAFKRGLA-SNSSVANSV 414
Query: 60 LNAYVLLSFL-DACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLS 118
++ +V + DA F+ + +N V++NT + G R+ + ++A ++ E +R+
Sbjct: 415 ISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERE----- 469
Query: 119 SMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFI 178
G+S F T ++LSG A++GS+ G+ +H +
Sbjct: 470 -------------LGVSAF--------------TFASLLSGVANVGSIR--KGEQIHSQV 500
Query: 179 VKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEAL 238
VK G N + L++MY+K G + A+ VF M RNV+SWT++I G A+ GF L
Sbjct: 501 VKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVL 560
Query: 239 VVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFK-MIEDYGMEPKVHHYASLVYL 297
F +M GV+PNE+T+ +LSAC+H GLV EG R+F M ED+ ++PK+ HYA +V L
Sbjct: 561 ETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDL 620
Query: 298 VGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPEDDRG 357
+ ++G L +A+E I TM + +V+V+ +FL AC+ H E+ + ++L + ++
Sbjct: 621 LCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILEL--DPNEPA 678
Query: 358 IYRLIHDLYVMGEKWEEAAKL 378
Y + ++Y KWEE+ ++
Sbjct: 679 AYIQLSNIYACAGKWEESTEM 699
Score = 114 bits (286), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 96/351 (27%), Positives = 161/351 (45%), Gaps = 56/351 (15%)
Query: 73 ILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAP---QRDSVSLSSMISAYNNIGS 129
I FD P+ +V +N++I YS+SGD +A +VFE +RD VS S+M++ Y N G
Sbjct: 89 IEFDIEPD--SVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGR 146
Query: 130 SKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNG-WELNAE 188
+ +F L G+ P+ AV+ C++ +G+ G+ GF++K G +E +
Sbjct: 147 ELDAIKVFVEFLEL-GLVPNDYCYTAVIRACSNSDFVGV--GRVTLGFLMKTGHFESDVC 203
Query: 189 LGATLVNMYAKG-GVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVA 247
+G +L++M+ KG NA VF+ M E NV++WT +I Q GF EA+ F M ++
Sbjct: 204 VGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLS 263
Query: 248 GVRPNELTFTGVLSACAH------------------------------------AGLVEE 271
G ++ T + V SACA G V++
Sbjct: 264 GFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDVECSLVDMYAKCSADGSVDD 323
Query: 272 GRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRL-EEAY----EIIKTMKVEPNVVVFGSF 326
R+ F +ED+ V + +L+ K+ L EA E+I VEPN F S
Sbjct: 324 CRKVFDRMEDHS----VMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSA 379
Query: 327 LSACKEHKQFEMAERVIEQVLRMVKPEDDRGIYRLIHDLYVMGEKWEEAAK 377
AC + ++V+ Q + + + + ++V ++ E+A +
Sbjct: 380 FKACGNLSDPRVGKQVLGQAFKR-GLASNSSVANSVISMFVKSDRMEDAQR 429
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/353 (20%), Positives = 149/353 (42%), Gaps = 48/353 (13%)
Query: 10 TGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLLNAYVLLSF- 68
+G D F + +C + L +L++ + LH+ I+ G V L++ Y S
Sbjct: 263 SGFESDKFTLSSVFSAC-AELENLSLGKQLHSWAIRSGLVD---DVECSLVDMYAKCSAD 318
Query: 69 --LDAC-ILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYN 125
+D C +FD M + + ++W +I GY +
Sbjct: 319 GSVDDCRKVFDRMEDHSVMSWTALITGYMK------------------------------ 348
Query: 126 NIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWEL 185
N + + ++LF ++ ++P+ T + C ++ + GK V G K G
Sbjct: 349 NCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRV--GKQVLGQAFKRGLAS 406
Query: 186 NAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMR 245
N+ + ++++M+ K + +A FE + E+N++S+ + G + E+A + ++
Sbjct: 407 NSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEIT 466
Query: 246 VAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLE 305
+ + TF +LS A+ G + +G + + G+ +L+ + K G ++
Sbjct: 467 ERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSID 526
Query: 306 EAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRM----VKPED 354
A + M+ NV+ + S ++ +H A RV+E +M VKP +
Sbjct: 527 TASRVFNFME-NRNVISWTSMITGFAKHG---FAIRVLETFNQMIEEGVKPNE 575
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 97/195 (49%), Gaps = 9/195 (4%)
Query: 144 EGIKP-DQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGV 202
+GI+P D VT ++L C L GK VH +++ E ++ L +L+++Y+K G
Sbjct: 55 DGIRPMDSVTFSSLLKSCIRARDFRL--GKLVHARLIEFDIEPDSVLYNSLISLYSKSGD 112
Query: 203 LRNAAMVFELMV---ERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGV 259
A VFE M +R+V+SW+A++ G +A+ VF + G+ PN+ +T V
Sbjct: 113 SAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAV 172
Query: 260 LSACAHAGLVEEGRRYFKMIEDYG-MEPKVHHYASLVYL-VGKSGRLEEAYEIIKTMKVE 317
+ AC+++ V GR + G E V SL+ + V E AY++ M E
Sbjct: 173 IRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMS-E 231
Query: 318 PNVVVFGSFLSACKE 332
NVV + ++ C +
Sbjct: 232 LNVVTWTLMITRCMQ 246
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 181 bits (459), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 114/366 (31%), Positives = 192/366 (52%), Gaps = 38/366 (10%)
Query: 2 HLYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLLN 61
+++ ++ TGV DS ++ + CT + L + + LH +K G
Sbjct: 142 YMFRRMKETGVSVDSVTMLGLVPLCTVPEY-LWLGRSLHGQCVKGGL------------- 187
Query: 62 AYVLLSFLDACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMI 121
+ N+ I Y + G V+ R +F+E P + ++ +++I
Sbjct: 188 ------------------DSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVI 229
Query: 122 SAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKN 181
S Y+ G + L L+ + + G+ PD T +VLS CAH+G+ + G V + N
Sbjct: 230 SGYSQNGLAYDVLELYEQ-MKSSGVCPDPFTLVSVLSSCAHLGAKKI--GHEVGKLVESN 286
Query: 182 GWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVF 241
G+ N + ++MYA+ G L A VF++M ++++SWTA+I G E L++F
Sbjct: 287 GFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLF 346
Query: 242 EKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFK-MIEDYGMEPKVHHYASLVYLVGK 300
+ M G+RP+ F VLSAC+H+GL ++G F+ M +Y +EP HY+ LV L+G+
Sbjct: 347 DDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGR 406
Query: 301 SGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPEDDRGIYR 360
+GRL+EA E I++M VEP+ V+G+ L ACK HK +MAE +V+ +P ++ G Y
Sbjct: 407 AGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVIEF-EP-NNIGYYV 464
Query: 361 LIHDLY 366
L+ ++Y
Sbjct: 465 LMSNIY 470
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 99/357 (27%), Positives = 163/357 (45%), Gaps = 41/357 (11%)
Query: 1 MHLYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTII-QHLHAHIIKLGFAPTHLHVANCL 59
+ LY + R+G D+F F LKSC S SL + Q LH H+ K G C
Sbjct: 38 ISLYRSMLRSGSSPDAFSFPFILKSCASL--SLPVSGQQLHCHVTKGG----------CE 85
Query: 60 LNAYVLLSFLDACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRD--SVSL 117
+VL +I Y + G V AR+VFEE PQ SV
Sbjct: 86 TEPFVL---------------------TALISMYCKCGLVADARKVFEENPQSSQLSVCY 124
Query: 118 SSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGF 177
+++IS Y +FRR + G+ D VT ++ C L L G+S+HG
Sbjct: 125 NALISGYTANSKVTDAAYMFRR-MKETGVSVDSVTMLGLVPLCTVPEYLWL--GRSLHGQ 181
Query: 178 IVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEA 237
VK G + + + + MY K G + +F+ M + +++W A+I G +Q G +
Sbjct: 182 CVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDV 241
Query: 238 LVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYL 297
L ++E+M+ +GV P+ T VLS+CAH G + G K++E G P V + + +
Sbjct: 242 LELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISM 301
Query: 298 VGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVL-RMVKPE 353
+ G L +A + M V+ ++V + + + H E+ + + ++ R ++P+
Sbjct: 302 YARCGNLAKARAVFDIMPVK-SLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPD 357
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 111/266 (41%), Gaps = 45/266 (16%)
Query: 1 MHLYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLL 60
+ LY ++ +GV D F +V L SC +HL + I + + GF P ++ V+N +
Sbjct: 242 LELYEQMKSSGVCPDPFTLVSVLSSC-AHLGAKKIGHEVGKLVESNGFVP-NVFVSNASI 299
Query: 61 NAYVLLSFL-DACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSS 119
+ Y L A +FD MP ++ V+W ++
Sbjct: 300 SMYARCGNLAKARAVFDIMPVKSLVSW-------------------------------TA 328
Query: 120 MISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGF-I 178
MI Y G + GL LF ++ GI+PD VLS C+H G L K + F
Sbjct: 329 MIGCYGMHGMGEIGLMLFDD-MIKRGIRPDGAVFVMVLSACSHSG----LTDKGLELFRA 383
Query: 179 VKNGWELN--AELGATLVNMYAKGGVLRNAAMVFELM-VERNVLSWTALICGAAQWGFCE 235
+K ++L E + LV++ + G L A E M VE + W AL+ +
Sbjct: 384 MKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVD 443
Query: 236 EALVVFEKMRVAGVRPNELTFTGVLS 261
A + F K V PN + + ++S
Sbjct: 444 MAELAFAK--VIEFEPNNIGYYVLMS 467
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 181 bits (459), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 106/309 (34%), Positives = 177/309 (57%), Gaps = 8/309 (2%)
Query: 14 FDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLLNAYVLLSFLDAC- 72
FD F F +K+C + S+ + +H IK GF + N L++ Y D+
Sbjct: 117 FDKFTFPFVIKACLAS-SSIRLGTQVHGLAIKAGFF-NDVFFQNTLMDLYFKCGKPDSGR 174
Query: 73 ILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQ 132
+FD+MP R+ V+W TM+ G + + A VF + P R+ VS ++MI+AY +
Sbjct: 175 KVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDE 234
Query: 133 GLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGAT 192
LFRR+ + + +KP++ T +L +GSL + G+ VH + KNG+ L+ LG
Sbjct: 235 AFQLFRRMQV-DDVKPNEFTIVNLLQASTQLGSLSM--GRWVHDYAHKNGFVLDCFLGTA 291
Query: 193 LVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVF-EKMRVAGVRP 251
L++MY+K G L++A VF++M +++ +W ++I G EEAL +F E A V P
Sbjct: 292 LIDMYSKCGSLQDARKVFDVMQGKSLATWNSMITSLGVHGCGEEALSLFEEMEEEASVEP 351
Query: 252 NELTFTGVLSACAHAGLVEEGRRYF-KMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEI 310
+ +TF GVLSACA+ G V++G RYF +MI+ YG+ P H A ++ L+ ++ +E+A +
Sbjct: 352 DAITFVGVLSACANTGNVKDGLRYFTRMIQVYGISPIREHNACMIQLLEQALEVEKASNL 411
Query: 311 IKTMKVEPN 319
+++M +P+
Sbjct: 412 VESMDSDPD 420
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 181 bits (458), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 107/325 (32%), Positives = 187/325 (57%), Gaps = 9/325 (2%)
Query: 67 SFLDACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNN 126
++A LFDEMP R+ +++ +MI GY++ GD+ AR++FEEA D + S++I Y
Sbjct: 222 DLVNAKKLFDEMPKRDIISYTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQ 281
Query: 127 IGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELN 186
G + +F + + +KPD+ ++S C+ MG L + V ++ + + +
Sbjct: 282 NGQPNEAFKVFSE-MCAKNVKPDEFIMVGLMSACSQMGCFELC--EKVDSYLHQRMNKFS 338
Query: 187 AE-LGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMR 245
+ + L++M AK G + AA +FE M +R+++S+ +++ G A G EA+ +FEKM
Sbjct: 339 SHYVVPALIDMNAKCGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMV 398
Query: 246 VAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMI-EDYGMEPKVHHYASLVYLVGKSGRL 304
G+ P+E+ FT +L C + LVEEG RYF+++ + Y + HY+ +V L+ ++G+L
Sbjct: 399 DEGIVPDEVAFTVILKVCGQSRLVEEGLRYFELMRKKYSILASPDHYSCIVNLLSRTGKL 458
Query: 305 EEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPEDDRGIYRLIHD 364
+EAYE+IK+M E + +GS L C H E+AE V+ + L ++P+ G Y L+ +
Sbjct: 459 KEAYELIKSMPFEAHASAWGSLLGGCSLHGNTEIAE-VVARHLFELEPQ-SAGSYVLLSN 516
Query: 365 LYVMGEKWEEAAKLGPGFDFNRSGI 389
+Y ++W + A L N +GI
Sbjct: 517 IYAALDRWTDVAHLRD--KMNENGI 539
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 128/268 (47%), Gaps = 36/268 (13%)
Query: 105 VFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMG 164
VFE P + + +I Y+N + +S+ R++ +PD+ T V+ C++ G
Sbjct: 65 VFERVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNG 124
Query: 165 SLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTAL 224
+ + G SVHG +++ G++ + +G + V+ Y K L +A VF M ERN +SWTAL
Sbjct: 125 QVRV--GSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTAL 182
Query: 225 ICGAAQWGFCEEALVVFEKMR----------VAGV-----------------RPNELTFT 257
+ + G EEA +F+ M V G+ + + +++T
Sbjct: 183 VVAYVKSGELEEAKSMFDLMPERNLGSWNALVDGLVKSGDLVNAKKLFDEMPKRDIISYT 242
Query: 258 GVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTM--- 314
++ A G + R F+ E G++ V +++L+ ++G+ EA+++ M
Sbjct: 243 SMIDGYAKGGDMVSARDLFE--EARGVD--VRAWSALILGYAQNGQPNEAFKVFSEMCAK 298
Query: 315 KVEPNVVVFGSFLSACKEHKQFEMAERV 342
V+P+ + +SAC + FE+ E+V
Sbjct: 299 NVKPDEFIMVGLMSACSQMGCFELCEKV 326
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 181 bits (458), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 192/385 (49%), Gaps = 49/385 (12%)
Query: 3 LYSK-LHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLLN 61
LY K L R D F LK+C +++ + + +H I+K GF ++V N L++
Sbjct: 137 LYRKMLERGESSPDKHTFPFVLKAC-AYIFGFSEGKQVHCQIVKHGFG-GDVYVNNGLIH 194
Query: 62 AYVLLSFLDACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMI 121
Y LD AR+VF+E P+R VS +SMI
Sbjct: 195 LYGSCGCLDL------------------------------ARKVFDEMPERSLVSWNSMI 224
Query: 122 SAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKN 181
A G L LFR + +PD T +VLS CA +GSL L G H F+++
Sbjct: 225 DALVRFGEYDSALQLFRE--MQRSFEPDGYTMQSVLSACAGLGSLSL--GTWAHAFLLRK 280
Query: 182 ---GWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEAL 238
++ + +L+ MY K G LR A VF+ M +R++ SW A+I G A G EEA+
Sbjct: 281 CDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAM 340
Query: 239 VVFEKM--RVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKM-IEDYGMEPKVHHYASLV 295
F++M + VRPN +TF G+L AC H G V +GR+YF M + DY +EP + HY +V
Sbjct: 341 NFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIV 400
Query: 296 YLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSA-CKEHKQFEMAERVIEQVLRMVKPED 354
L+ ++G + EA +++ +M ++P+ V++ S L A CK+ E++E + ++ + +
Sbjct: 401 DLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNE 460
Query: 355 D-----RGIYRLIHDLYVMGEKWEE 374
G Y L+ +Y +W +
Sbjct: 461 SSNGNCSGAYVLLSRVYASASRWND 485
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 135/304 (44%), Gaps = 46/304 (15%)
Query: 20 VFTLKSCTSHLHSLTIIQHLHAHIIKLGFA--PTHLHVANCLLNAYVLLSFLD-ACILFD 76
+F+L S + L + LHA ++ + P L + +L S ++ A +FD
Sbjct: 51 IFSLAETCSDMSQL---KQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFD 107
Query: 77 EMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSL 136
+ N ++ WNT+I + DV R E F L
Sbjct: 108 SIENHSSFMWNTLIRACAH--DVSRKEEAF----------------------------ML 137
Query: 137 FRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNM 196
+R++L PD+ T VL CA++ G GK VH IVK+G+ + + L+++
Sbjct: 138 YRKMLERGESSPDKHTFPFVLKACAYI--FGFSEGKQVHCQIVKHGFGGDVYVNNGLIHL 195
Query: 197 YAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTF 256
Y G L A VF+ M ER+++SW ++I ++G + AL +F +M+ + P+ T
Sbjct: 196 YGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQRS-FEPDGYTM 254
Query: 257 TGVLSACAHAGLVEEGRRYF-----KMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEII 311
VLSACA G + G K D M+ V + SL+ + K G L A ++
Sbjct: 255 QSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKN--SLIEMYCKCGSLRMAEQVF 312
Query: 312 KTMK 315
+ M+
Sbjct: 313 QGMQ 316
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 180 bits (457), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 96/297 (32%), Positives = 170/297 (57%), Gaps = 5/297 (1%)
Query: 83 TVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLL 142
T+ N +I YS+ DV+ +FE+ + +S +S+IS G + +F +++L
Sbjct: 382 TLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMML 441
Query: 143 FEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGV 202
G+ PD +T ++L+GC+ + L L GK +HG+ ++N +E + L++MYAK G
Sbjct: 442 TGGLLPDAITIASLLAGCSQLCCLNL--GKELHGYTLRNNFENENFVCTALIDMYAKCGN 499
Query: 203 LRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSA 262
A VF+ + +W ++I G + G AL + +MR G++P+E+TF GVLSA
Sbjct: 500 EVQAESVFKSIKAPCTATWNSMISGYSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSA 559
Query: 263 CAHAGLVEEGRRYFK-MIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVV 321
C H G V+EG+ F+ MI+++G+ P + HYA +V L+G++ EA +I M ++P+
Sbjct: 560 CNHGGFVDEGKICFRAMIKEFGISPTLQHYALMVGLLGRACLFTEALYLIWKMDIKPDSA 619
Query: 322 VFGSFLSACKEHKQFEMAERVIEQVLRMVKPEDDRGIYRLIHDLYVMGEKWEEAAKL 378
V+G+ LSAC H++ E+ E V ++ + + G+Y L+ +LY W++ ++
Sbjct: 620 VWGALLSACIIHRELEVGEYVARKMFML--DYKNGGLYVLMSNLYATEAMWDDVVRV 674
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/363 (23%), Positives = 160/363 (44%), Gaps = 44/363 (12%)
Query: 3 LYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTI-IQHLHAHIIKLGFAPTHLHVANCLLN 61
++ L R+ + + F + L++ T+ +S + ++ + H+ K G ++V LLN
Sbjct: 35 IFRDLLRSSLTPNHFTMSIFLQATTTSFNSFKLQVEQVQTHLTKSGL-DRFVYVKTSLLN 93
Query: 62 AYVLLSFLDACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMI 121
Y+ + G V A+ +F+E P+RD+V +++I
Sbjct: 94 LYL------------------------------KKGCVTSAQMLFDEMPERDTVVWNALI 123
Query: 122 SAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKN 181
Y+ G LF V+L +G P T +L C G + G+SVHG K+
Sbjct: 124 CGYSRNGYECDAWKLFI-VMLQQGFSPSATTLVNLLPFCGQCGFVS--QGRSVHGVAAKS 180
Query: 182 GWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVF 241
G EL++++ L++ Y+K L +A ++F M +++ +SW +I +Q G EEA+ VF
Sbjct: 181 GLELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVF 240
Query: 242 EKMRVAGVRPNELTFTGVLSA-CAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGK 300
+ M V + +T +LSA +H L ++ GM + SLV +
Sbjct: 241 KNMFEKNVEISPVTIINLLSAHVSHEPL-------HCLVVKCGMVNDISVVTSLVCAYSR 293
Query: 301 SGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPEDDRGIYR 360
G L A + + K + ++V S +S E ++A + ++ D +
Sbjct: 294 CGCLVSAERLYASAK-QDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVG 352
Query: 361 LIH 363
++H
Sbjct: 353 ILH 355
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 86/191 (45%), Gaps = 1/191 (0%)
Query: 130 SKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAEL 189
S +++FR LL + P+ T L + L + V + K+G + +
Sbjct: 29 SSSPITIFRD-LLRSSLTPNHFTMSIFLQATTTSFNSFKLQVEQVQTHLTKSGLDRFVYV 87
Query: 190 GATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGV 249
+L+N+Y K G + +A M+F+ M ER+ + W ALICG ++ G+ +A +F M G
Sbjct: 88 KTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGF 147
Query: 250 RPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYE 309
P+ T +L C G V +GR + G+E +L+ K L A
Sbjct: 148 SPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEV 207
Query: 310 IIKTMKVEPNV 320
+ + MK + V
Sbjct: 208 LFREMKDKSTV 218
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/262 (21%), Positives = 124/262 (47%), Gaps = 12/262 (4%)
Query: 87 NTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFE-G 145
N +I YS+ ++ A +F E + +VS ++MI AY+ G ++ +++F+ +FE
Sbjct: 190 NALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKN--MFEKN 247
Query: 146 IKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRN 205
++ VT +LS AH ++ + +H +VK G + + +LV Y++ G L +
Sbjct: 248 VEISPVTIINLLS--AH------VSHEPLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVS 299
Query: 206 AAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAH 265
A ++ + +++ T+++ A+ G + A+V F K R ++ + + G+L C
Sbjct: 300 AERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKK 359
Query: 266 AGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGS 325
+ ++ G G+ K L+ + K +E + + ++ P ++ + S
Sbjct: 360 SSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETP-LISWNS 418
Query: 326 FLSACKEHKQFEMAERVIEQVL 347
+S C + + A V Q++
Sbjct: 419 VISGCVQSGRASTAFEVFHQMM 440
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 180 bits (457), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 105/333 (31%), Positives = 189/333 (56%), Gaps = 20/333 (6%)
Query: 61 NAYVLLSFLDACI-------------LFDEMP-NRNTVTWNTMIVGYSRSGDVQRAREVF 106
++Y ++ L AC+ +EM +N+ T++ Y++ G +++AR VF
Sbjct: 211 DSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVF 270
Query: 107 EEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSL 166
+ ++D V+ S+MI Y + K+G+ LF + +L E +KPDQ + LS CA +G+L
Sbjct: 271 DSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQ-MLQENLKPDQFSIVGFLSSCASLGAL 329
Query: 167 GLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALIC 226
L G+ I ++ + N + L++MYAK G + VF+ M E++++ A I
Sbjct: 330 DL--GEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAIS 387
Query: 227 GAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIE-DYGME 285
G A+ G + + VF + G+ P+ TF G+L C HAGL+++G R+F I Y ++
Sbjct: 388 GLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALK 447
Query: 286 PKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQ 345
V HY +V L G++G L++AY +I M + PN +V+G+ LS C+ K ++AE V+++
Sbjct: 448 RTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKE 507
Query: 346 VLRMVKPEDDRGIYRLIHDLYVMGEKWEEAAKL 378
++ + +P + G Y + ++Y +G +W+EAA++
Sbjct: 508 LIAL-EPW-NAGNYVQLSNIYSVGGRWDEAAEV 538
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 86/354 (24%), Positives = 172/354 (48%), Gaps = 37/354 (10%)
Query: 1 MHLYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLL 60
+ L+ + + G+ F LK+CT S + LH+ ++K GF
Sbjct: 96 LDLFLSIRKHGLYLHGFTFPLVLKACT-RASSRKLGIDLHSLVVKCGF------------ 142
Query: 61 NAYVLLSFLDACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSM 120
N + +++ YS SG + A ++F+E P R V+ +++
Sbjct: 143 -------------------NHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTAL 183
Query: 121 ISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVK 180
S Y G ++ + LF++++ G+KPD VLS C H+G L +G+ + ++ +
Sbjct: 184 FSGYTTSGRHREAIDLFKKMVEM-GVKPDSYFIVQVLSACVHVGDLD--SGEWIVKYMEE 240
Query: 181 NGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVV 240
+ N+ + TLVN+YAK G + A VF+ MVE+++++W+ +I G A F +E + +
Sbjct: 241 MEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIEL 300
Query: 241 FEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGK 300
F +M ++P++ + G LS+CA G ++ G +I+ + + +L+ + K
Sbjct: 301 FLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAK 360
Query: 301 SGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRM-VKPE 353
G + +E+ K MK E ++V+ + +S ++ +++ V Q ++ + P+
Sbjct: 361 CGAMARGFEVFKEMK-EKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPD 413
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 107/212 (50%), Gaps = 4/212 (1%)
Query: 118 SSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGF 177
+S+I+ + N + L LF + G+ T VL C S L G +H
Sbjct: 80 NSLINGFVNNHLFHETLDLFLSIRK-HGLYLHGFTFPLVLKACTRASSRKL--GIDLHSL 136
Query: 178 IVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEA 237
+VK G+ + +L+++Y+ G L +A +F+ + +R+V++WTAL G G EA
Sbjct: 137 VVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREA 196
Query: 238 LVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYL 297
+ +F+KM GV+P+ VLSAC H G ++ G K +E+ M+ +LV L
Sbjct: 197 IDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNL 256
Query: 298 VGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSA 329
K G++E+A + +M VE ++V + + +
Sbjct: 257 YAKCGKMEKARSVFDSM-VEKDIVTWSTMIQG 287
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 179 bits (455), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 111/379 (29%), Positives = 189/379 (49%), Gaps = 38/379 (10%)
Query: 4 YSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLLNAY 63
+ ++ G+ D + L +C L ++ + +HA II+ F H++V + L++ Y
Sbjct: 258 FREMKVQGLKMDQYPFGSVLPACGG-LGAINEGKQIHACIIRTNFQ-DHIYVGSALIDMY 315
Query: 64 VLLSFLDACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISA 123
L A+ VF+ Q++ VS ++M+
Sbjct: 316 CKCKCL------------------------------HYAKTVFDRMKQKNVVSWTAMVVG 345
Query: 124 YNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGW 183
Y G +++ + +F + GI PD T G +S CA++ SL G HG + +G
Sbjct: 346 YGQTGRAEEAVKIFLD-MQRSGIDPDHYTLGQAISACANVSSLE--EGSQFHGKAITSGL 402
Query: 184 ELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEK 243
+ +LV +Y K G + ++ +F M R+ +SWTA++ AQ+G E + +F+K
Sbjct: 403 IHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDK 462
Query: 244 MRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFK-MIEDYGMEPKVHHYASLVYLVGKSG 302
M G++P+ +T TGV+SAC+ AGLVE+G+RYFK M +YG+ P + HY+ ++ L +SG
Sbjct: 463 MVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSG 522
Query: 303 RLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPEDDRGIYRLI 362
RLEEA I M P+ + + + LSAC+ E+ + E ++ + P G Y L+
Sbjct: 523 RLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIEL-DPHHPAG-YTLL 580
Query: 363 HDLYVMGEKWEEAAKLGPG 381
+Y KW+ A+L G
Sbjct: 581 SSIYASKGKWDSVAQLRRG 599
Score = 156 bits (395), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 103/330 (31%), Positives = 181/330 (54%), Gaps = 11/330 (3%)
Query: 23 LKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLLNAYVLLSFL-DACILFDEMPNR 81
LK +S+ H +++ + +H +IKLGF ++L V + LL Y + + DA +F + +R
Sbjct: 146 LKLSSSNGH-VSLGKQIHGQVIKLGF-ESYLLVGSPLLYMYANVGCISDAKKVFYGLDDR 203
Query: 82 NTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVL 141
NTV +N+++ G G ++ A ++F ++DSVS ++MI G +K+ + FR +
Sbjct: 204 NTVMYNSLMGGLLACGMIEDALQLFR-GMEKDSVSWAAMIKGLAQNGLAKEAIECFREMK 262
Query: 142 LFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGG 201
+ +G+K DQ G+VL C +G++ GK +H I++ ++ + +G+ L++MY K
Sbjct: 263 V-QGLKMDQYPFGSVLPACGGLGAIN--EGKQIHACIIRTNFQDHIYVGSALIDMYCKCK 319
Query: 202 VLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLS 261
L A VF+ M ++NV+SWTA++ G Q G EEA+ +F M+ +G+ P+ T +S
Sbjct: 320 CLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAIS 379
Query: 262 ACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVV 321
ACA+ +EEG ++ G+ V SLV L GK G ++++ + M V V
Sbjct: 380 ACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAV- 438
Query: 322 VFGSFLSACKEHKQFEMAERVIEQVLRMVK 351
S+ + + QF A I+ +MV+
Sbjct: 439 ---SWTAMVSAYAQFGRAVETIQLFDKMVQ 465
Score = 121 bits (303), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 94/368 (25%), Positives = 164/368 (44%), Gaps = 70/368 (19%)
Query: 36 IQHLHAHIIK-LGFAPTHLHVANCLLNAYVLL-SFLDACILFDEMPNRNTVTWNTMIVGY 93
++ +H +II+ L + T L+ N +++AY L+ S A +FD +P N +WN +++ Y
Sbjct: 25 VKMIHGNIIRALPYPETFLY--NNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAY 82
Query: 94 SRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTA 153
S++G + FE+ P RD V+ + +I Y+ G + + ++ +VT
Sbjct: 83 SKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTL 142
Query: 154 GAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELM 213
+L + G + L GK +HG ++K G+E +G+ L+ MYA G + +A VF +
Sbjct: 143 MTMLKLSSSNGHVSL--GKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGL 200
Query: 214 VERNV------------------------------LSWTALICGAAQWGFCEEALVVFEK 243
+RN +SW A+I G AQ G +EA+ F +
Sbjct: 201 DDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFRE 260
Query: 244 MRVAGVRPNELTFTGVLSACAHAGLVEEGRR----------------------------- 274
M+V G++ ++ F VL AC G + EG++
Sbjct: 261 MKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKC 320
Query: 275 --YFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMK---VEPNVVVFGSFLSA 329
Y K + D + V + ++V G++GR EEA +I M+ ++P+ G +SA
Sbjct: 321 LHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISA 380
Query: 330 CKEHKQFE 337
C E
Sbjct: 381 CANVSSLE 388
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 179 bits (455), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 118/382 (30%), Positives = 199/382 (52%), Gaps = 47/382 (12%)
Query: 1 MHLYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQ--HLHAHIIKLGFAPTHLHVANC 58
+ L+S++ R GV + F L + L +I +HA ++K + + V
Sbjct: 382 VDLFSEMKRKGVRPNEFTYSVILTA-------LPVISPSEVHAQVVKTNYERSST-VGTA 433
Query: 59 LLNAYVLLSFLDACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLS 118
LL+AYV L G V+ A +VF +D V+ S
Sbjct: 434 LLDAYVKL------------------------------GKVEEAAKVFSGIDDKDIVAWS 463
Query: 119 SMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHM-GSLGLLAGKSVHGF 177
+M++ Y G ++ + +F L GIKP++ T ++L+ CA S+G GK HGF
Sbjct: 464 AMLAGYAQTGETEAAIKMFGE-LTKGGIKPNEFTFSSILNVCAATNASMG--QGKQFHGF 520
Query: 178 IVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEA 237
+K+ + + + + L+ MYAK G + +A VF+ E++++SW ++I G AQ G +A
Sbjct: 521 AIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKA 580
Query: 238 LVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFK-MIEDYGMEPKVHHYASLVY 296
L VF++M+ V+ + +TF GV +AC HAGLVEEG +YF M+ D + P H + +V
Sbjct: 581 LDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVD 640
Query: 297 LVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPEDDR 356
L ++G+LE+A ++I+ M ++ + L+AC+ HK+ E+ E+++ M KPED
Sbjct: 641 LYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAM-KPEDS- 698
Query: 357 GIYRLIHDLYVMGEKWEEAAKL 378
Y L+ ++Y W+E AK+
Sbjct: 699 AAYVLLSNMYAESGDWQERAKV 720
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/329 (24%), Positives = 161/329 (48%), Gaps = 44/329 (13%)
Query: 23 LKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLLNAYV-LLSFLDACILFDEMPN- 80
+K C ++L L + LH ++K GF ++ L+ AY + LDA LF E+
Sbjct: 302 IKLC-ANLKELRFTEQLHCSVVKYGFLFDQ-NIRTALMVAYSKCTAMLDALRLFKEIGCV 359
Query: 81 RNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRV 140
N V+W MI G+ ++ + A ++F E ++
Sbjct: 360 GNVVSWTAMISGFLQNDGKEEAVDLFSEMKRK---------------------------- 391
Query: 141 LLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKG 200
G++P++ T +L+ +L +++ VH +VK +E ++ +G L++ Y K
Sbjct: 392 ----GVRPNEFTYSVILT------ALPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKL 441
Query: 201 GVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVL 260
G + AA VF + ++++++W+A++ G AQ G E A+ +F ++ G++PNE TF+ +L
Sbjct: 442 GKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSIL 501
Query: 261 SACAHAGL-VEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPN 319
+ CA + +G+++ ++ + ++L+ + K G +E A E+ K + E +
Sbjct: 502 NVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQR-EKD 560
Query: 320 VVVFGSFLSACKEHKQFEMAERVIEQVLR 348
+V + S +S +H Q A V +++ +
Sbjct: 561 LVSWNSMISGYAQHGQAMKALDVFKEMKK 589
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 104/418 (24%), Positives = 177/418 (42%), Gaps = 77/418 (18%)
Query: 2 HLYSKLHRTGVPFDSFCIVFT-LKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLL 60
L+ +HR G+ D C +F+ + ++ L + LH IK GF L
Sbjct: 79 RLFLNIHRLGMEMD--CSIFSSVLKVSATLCDELFGRQLHCQCIKFGF----------LD 126
Query: 61 NAYVLLSFLDACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSM 120
+ V S +D Y + + + R+VF+E +R+ V+ +++
Sbjct: 127 DVSVGTSLVDT---------------------YMKGSNFKDGRKVFDEMKERNVVTWTTL 165
Query: 121 ISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVK 180
IS Y + + L+LF R + EG +P+ T A L A G G G VH +VK
Sbjct: 166 ISGYARNSMNDEVLTLFMR-MQNEGTQPNSFTFAAALGVLAEEGVGG--RGLQVHTVVVK 222
Query: 181 NGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVV 240
NG + + +L+N+Y K G +R A ++F+ ++V++W ++I G A G EAL +
Sbjct: 223 NGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGM 282
Query: 241 FEKMRVAGVRPNELTFTGVLSACA-----------HAGLVEEGRRY-------------- 275
F MR+ VR +E +F V+ CA H +V+ G +
Sbjct: 283 FYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSK 342
Query: 276 -------FKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMK---VEPNVVVFGS 325
++ ++ G V + +++ ++ EEA ++ MK V PN +
Sbjct: 343 CTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSV 402
Query: 326 FLSACKEHKQFEMAERVIEQVLRMVKPEDDRGIYRLIHDLYVMGEKWEEAAKLGPGFD 383
L+A E+ +V++ E + + D YV K EEAAK+ G D
Sbjct: 403 ILTALPVISPSEVHAQVVK-----TNYERSSTVGTALLDAYVKLGKVEEAAKVFSGID 455
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 118/237 (49%), Gaps = 4/237 (1%)
Query: 92 GYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQV 151
G S + A +F+++P RD S S++ ++ G +++ LF + G++ D
Sbjct: 36 GTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRL-GMEMDCS 94
Query: 152 TAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFE 211
+VL A + L G+ +H +K G+ + +G +LV+ Y KG ++ VF+
Sbjct: 95 IFSSVLKVSATL--CDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFD 152
Query: 212 LMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEE 271
M ERNV++WT LI G A+ +E L +F +M+ G +PN TF L A G+
Sbjct: 153 EMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGR 212
Query: 272 GRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLS 328
G + ++ G++ + SL+ L K G + +A + +V+ +VV + S +S
Sbjct: 213 GLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVK-SVVTWNSMIS 268
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 179 bits (455), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 97/298 (32%), Positives = 172/298 (57%), Gaps = 7/298 (2%)
Query: 93 YSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVT 152
YSR + A VF + D V+ SS+I+ Y+ G+ K+ L LF L G KPD V
Sbjct: 252 YSRCMCIASACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAE-LRMSGKKPDCVL 310
Query: 153 AGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFEL 212
VL CA + ++GK VH ++++ G EL+ ++ + L++MY+K G+L+ A +F
Sbjct: 311 VAIVLGSCAELSDS--VSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAG 368
Query: 213 MVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEG 272
+ E+N++S+ +LI G GF A F ++ G+ P+E+TF+ +L C H+GL+ +G
Sbjct: 369 IPEKNIVSFNSLILGLGLHGFASTAFEKFTEILEMGLIPDEITFSALLCTCCHSGLLNKG 428
Query: 273 RRYF-KMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSACK 331
+ F +M ++G+EP+ HY +V L+G +G+LEEA+E + +++ + + G+ LS C+
Sbjct: 429 QEIFERMKSEFGIEPQTEHYVYMVKLMGMAGKLEEAFEFVMSLQKPIDSGILGALLSCCE 488
Query: 332 EHKQFEMAERVIEQVLRMVKPEDDRGIYR-LIHDLYVMGEKWEEAAKLGPGFDFNRSG 388
H+ +AE V E + + E+ R +Y+ ++ ++Y +W+E +L G + G
Sbjct: 489 VHENTHLAEVVAENIHK--NGEERRSVYKVMLSNVYARYGRWDEVERLRDGISESYGG 544
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 132/268 (49%), Gaps = 4/268 (1%)
Query: 82 NTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVL 141
+ + + ++ YS++G + A ++F P D + MI Y G +G++LF ++
Sbjct: 140 DQICGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFN-LM 198
Query: 142 LFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGG 201
G +P+ T A+ SG + LL SVH F +K + ++ +G LVNMY++
Sbjct: 199 QHRGHQPNCYTMVALTSGL--IDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCM 256
Query: 202 VLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLS 261
+ +A VF + E ++++ ++LI G ++ G +EAL +F ++R++G +P+ + VL
Sbjct: 257 CIASACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLG 316
Query: 262 ACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVV 321
+CA G+ + G+E + ++L+ + K G L+ A + + E N+V
Sbjct: 317 SCAELSDSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIP-EKNIV 375
Query: 322 VFGSFLSACKEHKQFEMAERVIEQVLRM 349
F S + H A ++L M
Sbjct: 376 SFNSLILGLGLHGFASTAFEKFTEILEM 403
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 109/246 (44%), Gaps = 7/246 (2%)
Query: 93 YSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVT 152
Y+ + D+ AR++F+ P+R +S+I AY LSLF ++L + +PD T
Sbjct: 50 YALNDDLISARKLFDVFPERSVFLWNSIIRAYAKAHQFTTVLSLFSQILRSD-TRPDNFT 108
Query: 153 AGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFEL 212
+ G + S + +HG + +G + G+ +V Y+K G++ A+ +F
Sbjct: 109 YACLARGFSE--SFDTKGLRCIHGIAIVSGLGFDQICGSAIVKAYSKAGLIVEASKLFCS 166
Query: 213 MVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEG 272
+ + ++ W +I G GF ++ + +F M+ G +PN T + S L+
Sbjct: 167 IPDPDLALWNVMILGYGCCGFWDKGINLFNLMQHRGHQPNCYTMVALTSGLIDPSLLLVA 226
Query: 273 RRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFL---SA 329
++ + +LV + + + A + ++ EP++V S + S
Sbjct: 227 WSVHAFCLKINLDSHSYVGCALVNMYSRCMCIASACSVFNSIS-EPDLVACSSLITGYSR 285
Query: 330 CKEHKQ 335
C HK+
Sbjct: 286 CGNHKE 291
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 103/240 (42%), Gaps = 45/240 (18%)
Query: 1 MHLYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLL 60
+HL+++L +G D + L SC S++ + +H+++I+LG + V + L+
Sbjct: 293 LHLFAELRMSGKKPDCVLVAIVLGSCAELSDSVS-GKEVHSYVIRLGL-ELDIKVCSALI 350
Query: 61 NAYVLLSFLDACI-LFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQR----DSV 115
+ Y L + LF +P +N V++N++I+G G A E F E + D +
Sbjct: 351 DMYSKCGLLKCAMSLFAGIPEKNIVSFNSLILGLGLHGFASTAFEKFTEILEMGLIPDEI 410
Query: 116 SLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKP--------------------------- 148
+ S+++ + G +G +F R+ GI+P
Sbjct: 411 TFSALLCTCCHSGLLNKGQEIFERMKSEFGIEPQTEHYVYMVKLMGMAGKLEEAFEFVMS 470
Query: 149 -----DQVTAGAVLSGC-AHMGS-LGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGG 201
D GA+LS C H + L + +++H KNG E + L N+YA+ G
Sbjct: 471 LQKPIDSGILGALLSCCEVHENTHLAEVVAENIH----KNGEERRSVYKVMLSNVYARYG 526
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 179 bits (454), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 115/382 (30%), Positives = 211/382 (55%), Gaps = 16/382 (4%)
Query: 4 YSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLLNAY 63
+ +L G+ + F + S T+ + + + LH + +K+G A +++ V + +LN Y
Sbjct: 81 FKRLLCLGIRPNEFTFGTVIGSSTTS-RDVKLGKQLHCYALKMGLA-SNVFVGSAVLNCY 138
Query: 64 VLLSFL-DACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMIS 122
V LS L DA FD+ + N V+ +I GY + + + A +F P+R V+ +++I
Sbjct: 139 VKLSTLTDARRCFDDTRDPNVVSITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIG 198
Query: 123 AYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKN- 181
++ G +++ ++ F +L + P++ T ++ +++ S G AGKS+H +K
Sbjct: 199 GFSQTGRNEEAVNTFVDMLREGVVIPNESTFPCAITAISNIASHG--AGKSIHACAIKFL 256
Query: 182 GWELNAELGATLVNMYAKGGVLRNAAMVFELMVE--RNVLSWTALICGAAQWGFCEEALV 239
G N + +L++ Y+K G + ++ + F + E RN++SW ++I G A G EEA+
Sbjct: 257 GKRFNVFVWNSLISFYSKCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVA 316
Query: 240 VFEKM-RVAGVRPNELTFTGVLSACAHAGLVEEGRRYF-KMIEDYGMEP---KVHHYASL 294
+FEKM + +RPN +T GVL AC HAGL++EG YF K + DY +P ++ HYA +
Sbjct: 317 MFEKMVKDTNLRPNNVTILGVLFACNHAGLIQEGYMYFNKAVNDYD-DPNLLELEHYACM 375
Query: 295 VYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPED 354
V ++ +SGR +EA E+IK+M ++P + + + L C+ H +A+ ++L + P D
Sbjct: 376 VDMLSRSGRFKEAEELIKSMPLDPGIGFWKALLGGCQIHSNKRLAKLAASKILEL-DPRD 434
Query: 355 DRGIYRLIHDLYVMGEKWEEAA 376
Y ++ + Y E W+ +
Sbjct: 435 VSS-YVMLSNAYSAMENWQNVS 455
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 90/187 (48%), Gaps = 7/187 (3%)
Query: 90 IVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPD 149
+V + S ++ A +VF+E P+ D +S +++I + + F+R+L GI+P+
Sbjct: 34 LVKHIDSDLIRNAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCL-GIRPN 92
Query: 150 QVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMV 209
+ T G V+ + L GK +H + +K G N +G+ ++N Y K L +A
Sbjct: 93 EFTFGTVIGSSTTSRDVKL--GKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRC 150
Query: 210 FELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLV 269
F+ + NV+S T LI G + EEAL +F M V +T+ V+ + G
Sbjct: 151 FDDTRDPNVVSITNLISGYLKKHEFEEALSLFRAMPERSV----VTWNAVIGGFSQTGRN 206
Query: 270 EEGRRYF 276
EE F
Sbjct: 207 EEAVNTF 213
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 179 bits (454), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 100/295 (33%), Positives = 171/295 (57%), Gaps = 6/295 (2%)
Query: 84 VTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLF 143
V N+++ Y+ S V A V +RD+++ +S+++ +N +G + LS+ +
Sbjct: 463 VVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMALSVIN-YMYG 521
Query: 144 EGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVL 203
+GI+ DQ++ +S A++G+L GK +H + VK+G+ A + +LV+MY+K G L
Sbjct: 522 DGIRMDQLSLPGFISASANLGALE--TGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSL 579
Query: 204 RNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSAC 263
+A VFE + +V+SW L+ G A GF AL FE+MR+ P+ +TF +LSAC
Sbjct: 580 EDAKKVFEEIATPDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSAC 639
Query: 264 AHAGLVEEGRRYFKMIED-YGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVV 322
++ L + G YF++++ Y +EP+V HY LV ++G++GRLEEA +++TM ++PN ++
Sbjct: 640 SNGRLTDLGLEYFQVMKKIYNIEPQVEHYVHLVGILGRAGRLEEATGVVETMHLKPNAMI 699
Query: 323 FGSFLSACKEHKQFEMAERVIEQVLRMVKPEDDRGIYRLIHDLYVMGEKWEEAAK 377
F + L AC+ + E + + L + D +Y L+ DLY K E A K
Sbjct: 700 FKTLLRACRYRGNLSLGEDMANKGLALAP--SDPALYILLADLYDESGKPELAQK 752
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 88/353 (24%), Positives = 157/353 (44%), Gaps = 62/353 (17%)
Query: 52 HLHVANCLLNAYVLLSFLDACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQ 111
H+H C + + LL LD C N ++ Y ++ + AR++F+E
Sbjct: 44 HIH---CPVIKFGLLENLDLC--------------NNLLSLYLKTDGIWNARKLFDEMSH 86
Query: 112 RDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAG 171
R + + MISA+ LSLF ++ G P++ T +V+ CA + + G
Sbjct: 87 RTVFAWTVMISAFTKSQEFASALSLFEE-MMASGTHPNEFTFSSVVRSCAGLRDISY--G 143
Query: 172 KSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALIC---GA 228
VHG ++K G+E N+ +G++L ++Y+K G + A +F + + +SWT +I GA
Sbjct: 144 GRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGA 203
Query: 229 AQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKV 288
+W EAL + +M AGV PNE TF +L A + GL E G+ I G+ V
Sbjct: 204 RKW---REALQFYSEMVKAGVPPNEFTFVKLLGASSFLGL-EFGKTIHSNIIVRGIPLNV 259
Query: 289 HHYASLVYLVGKSGRLEEAYEII----------------------------------KTM 314
SLV + ++E+A ++ +++
Sbjct: 260 VLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSL 319
Query: 315 KVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPEDDRGIYRLIHDLYV 367
++PN + + LS C + + +++ Q ++ V ED + + D+Y+
Sbjct: 320 GLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIK-VGFEDSTDVGNALVDMYM 371
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 97/349 (27%), Positives = 162/349 (46%), Gaps = 48/349 (13%)
Query: 1 MHLYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLL 60
+ YS++ + GVP + F V L + S L + +H++II G P ++ + L+
Sbjct: 210 LQFYSEMVKAGVPPNEFTFVKLLGA--SSFLGLEFGKTIHSNIIVRGI-PLNVVLKTSLV 266
Query: 61 NAYVLLSFL-DACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSS 119
+ Y S + DA + + ++ W +++ G+ R+ RA+E
Sbjct: 267 DFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRN---LRAKEA-------------- 309
Query: 120 MISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIV 179
+G+ + SL G++P+ T A+LS C+ + SL GK +H +
Sbjct: 310 -------VGTFLEMRSL--------GLQPNNFTYSAILSLCSAVRSLDF--GKQIHSQTI 352
Query: 180 KNGWELNAELGATLVNMYAKGGVLR-NAAMVFELMVERNVLSWTALICGAAQWGFCEEAL 238
K G+E + ++G LV+MY K A+ VF MV NV+SWT LI G GF ++
Sbjct: 353 KVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCF 412
Query: 239 VVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYA----SL 294
+ +M V PN +T +GVL AC+ V RR + I Y + V SL
Sbjct: 413 GLLMEMVKREVEPNVVTLSGVLRACSKLRHV---RRVLE-IHAYLLRRHVDGEMVVGNSL 468
Query: 295 VYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVI 343
V S +++ A+ +I++MK N + + S ++ E + EMA VI
Sbjct: 469 VDAYASSRKVDYAWNVIRSMKRRDN-ITYTSLVTRFNELGKHEMALSVI 516
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 83/354 (23%), Positives = 155/354 (43%), Gaps = 39/354 (11%)
Query: 1 MHLYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLL 60
+ L+ ++ +G + F ++SC L ++ +H +IK GF
Sbjct: 109 LSLFEEMMASGTHPNEFTFSSVVRSCAG-LRDISYGGRVHGSVIKTGFEG---------- 157
Query: 61 NAYVLLSFLDACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSM 120
N+V +++ YS+ G + A E+F D++S + M
Sbjct: 158 ---------------------NSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMM 196
Query: 121 ISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVK 180
IS+ ++ L + ++ G+ P++ T +L + LGL GK++H I+
Sbjct: 197 ISSLVGARKWREALQFYSE-MVKAGVPPNEFTFVKLLGASSF---LGLEFGKTIHSNIIV 252
Query: 181 NGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVV 240
G LN L +LV+ Y++ + +A V E++V WT+++ G + +EA+
Sbjct: 253 RGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGT 312
Query: 241 FEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGK 300
F +MR G++PN T++ +LS C+ ++ G++ G E +LV + K
Sbjct: 313 FLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMK 372
Query: 301 SGRLE-EAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMA-ERVIEQVLRMVKP 352
E EA + M V PNVV + + + +H + ++E V R V+P
Sbjct: 373 CSASEVEASRVFGAM-VSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEP 425
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 84/354 (23%), Positives = 154/354 (43%), Gaps = 40/354 (11%)
Query: 4 YSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLLNAY 63
+ ++ G+ ++F L C S + SL + +H+ IK+GF + V N L++ Y
Sbjct: 313 FLEMRSLGLQPNNFTYSAILSLC-SAVRSLDFGKQIHSQTIKVGFEDS-TDVGNALVDMY 370
Query: 64 VLLSF--LDACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMI 121
+ S ++A +F M + N V+W T+I+G G VQ + E +R+
Sbjct: 371 MKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKRE-------- 422
Query: 122 SAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKN 181
++P+ VT VL C+ + + + +H ++++
Sbjct: 423 ------------------------VEPNVVTLSGVLRACSKLRHVRRVL--EIHAYLLRR 456
Query: 182 GWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVF 241
+ +G +LV+ YA + A V M R+ +++T+L+ + G E AL V
Sbjct: 457 HVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMALSVI 516
Query: 242 EKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKS 301
M G+R ++L+ G +SA A+ G +E G+ G SLV + K
Sbjct: 517 NYMYGDGIRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKC 576
Query: 302 GRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPEDD 355
G LE+A ++ + + P+VV + +S + A E+ +RM + E D
Sbjct: 577 GSLEDAKKVFEEIAT-PDVVSWNGLVSGLASNGFISSALSAFEE-MRMKETEPD 628
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 72/145 (49%)
Query: 171 GKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQ 230
G +H ++K G N +L L+++Y K + NA +F+ M R V +WT +I +
Sbjct: 42 GLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTK 101
Query: 231 WGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHH 290
AL +FE+M +G PNE TF+ V+ +CA + G R + G E
Sbjct: 102 SQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVV 161
Query: 291 YASLVYLVGKSGRLEEAYEIIKTMK 315
+SL L K G+ +EA E+ +++
Sbjct: 162 GSSLSDLYSKCGQFKEACELFSSLQ 186
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 67/129 (51%), Gaps = 6/129 (4%)
Query: 25 SCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLLNAYVLL-SFLDACILFDEMPNRNT 83
S +++L +L +HLH + +K GF+ V N L++ Y S DA +F+E+ +
Sbjct: 536 SASANLGALETGKHLHCYSVKSGFSGAA-SVLNSLVDMYSKCGSLEDAKKVFEEIATPDV 594
Query: 84 VTWNTMIVGYSRSGDVQRAREVFEEAPQR----DSVSLSSMISAYNNIGSSKQGLSLFRR 139
V+WN ++ G + +G + A FEE + DSV+ ++SA +N + GL F+
Sbjct: 595 VSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDLGLEYFQV 654
Query: 140 VLLFEGIKP 148
+ I+P
Sbjct: 655 MKKIYNIEP 663
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 179 bits (453), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 102/273 (37%), Positives = 161/273 (58%), Gaps = 9/273 (3%)
Query: 88 TMIVG-YSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGI 146
T ++G Y ++G + AR +F+ A ++D V+ + MI Y G ++ + L R+ + +E +
Sbjct: 266 TALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQ-MKYEKM 324
Query: 147 KPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNA 206
KP+ T +LS CA+ S G++V + + L+A LG LV+MYAK G+L A
Sbjct: 325 KPNSSTFVGLLSSCAY--SEAAFVGRTVADLLEEERIALDAILGTALVDMYAKVGLLEKA 382
Query: 207 AMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAG--VRPNELTFTGVLSACA 264
+F M +++V SWTA+I G G EA+ +F KM VRPNE+TF VL+AC+
Sbjct: 383 VEIFNRMKDKDVKSWTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVVLNACS 442
Query: 265 HAGLVEEGRRYFK-MIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVF 323
H GLV EG R FK M+E Y PKV HY +V L+G++G+LEEAYE+I+ + + + +
Sbjct: 443 HGGLVMEGIRCFKRMVEAYSFTPKVEHYGCVVDLLGRAGQLEEAYELIRNLPITSDSTAW 502
Query: 324 GSFLSACKEHKQFEMAERVIEQVLRM--VKPED 354
+ L+AC+ + ++ E V+ ++ M P D
Sbjct: 503 RALLAACRVYGNADLGESVMMRLAEMGETHPAD 535
Score = 122 bits (305), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 153/315 (48%), Gaps = 38/315 (12%)
Query: 3 LYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLLNA 62
++++L G+ D F + TLKSC+ L ++I + LH ++ GF
Sbjct: 112 VFNQLRAKGLTLDRFSFITTLKSCSREL-CVSIGEGLHGIALRSGF-------------- 156
Query: 63 YVLLSFLDACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQR-DSVSLSSMI 121
++F ++ N +I Y G + AR+VF+E PQ D+V+ S+++
Sbjct: 157 ----------MVFTDLRN-------ALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLM 199
Query: 122 SAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAG-KSVHGFIVK 180
+ Y + L LFR + E + V +LS + + LG L+G +S H +K
Sbjct: 200 NGYLQVSKKALALDLFRIMRKSEVV----VNVSTLLSFLSAISDLGDLSGAESAHVLCIK 255
Query: 181 NGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVV 240
G +L+ L L+ MY K G + +A +F+ + ++V++W +I A+ G EE + +
Sbjct: 256 IGLDLDLHLITALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWL 315
Query: 241 FEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGK 300
+M+ ++PN TF G+LS+CA++ GR ++E+ + +LV + K
Sbjct: 316 LRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVADLLEEERIALDAILGTALVDMYAK 375
Query: 301 SGRLEEAYEIIKTMK 315
G LE+A EI MK
Sbjct: 376 VGLLEKAVEIFNRMK 390
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 179 bits (453), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 110/345 (31%), Positives = 184/345 (53%), Gaps = 29/345 (8%)
Query: 37 QHLHAHIIKLGFAPTHLHVANCLLNAYVLLSFLD-ACILFDEMPNRNTVTWNTMIVGYSR 95
+ +H ++K G V N L++ Y L +D A +F +M +R+ VTWNTMI GY
Sbjct: 425 EAIHGFVVKRGLDRDRF-VQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGY-- 481
Query: 96 SGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGA 155
VF E + + L M + + +SL KP+ +T
Sbjct: 482 ---------VFSEHHEDALLLLHKMQNLERKVSKGASRVSL----------KPNSITLMT 522
Query: 156 VLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVE 215
+L CA + +L GK +H + +KN + +G+ LV+MYAK G L+ + VF+ + +
Sbjct: 523 ILPSCAALSALA--KGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQ 580
Query: 216 RNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRR- 274
+NV++W +I G +EA+ + M V GV+PNE+TF V +AC+H+G+V+EG R
Sbjct: 581 KNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRI 640
Query: 275 YFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVV-VFGSFLSACKEH 333
++ M DYG+EP HYA +V L+G++GR++EAY+++ M + N + S L A + H
Sbjct: 641 FYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIH 700
Query: 334 KQFEMAERVIEQVLRMVKPEDDRGIYRLIHDLYVMGEKWEEAAKL 378
E+ E + Q L ++P + Y L+ ++Y W++A ++
Sbjct: 701 NNLEIGE-IAAQNLIQLEP-NVASHYVLLANIYSSAGLWDKATEV 743
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 127/264 (48%), Gaps = 34/264 (12%)
Query: 11 GVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLLNAYVLLSFLD 70
G+ D++ LK+ + L + + + +HAH+ K G+ + VAN L+N Y
Sbjct: 92 GIKPDNYAFPALLKA-VADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLY------- 143
Query: 71 ACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSS 130
+ GD +VF+ +R+ VS +S+IS+ +
Sbjct: 144 -----------------------RKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKW 180
Query: 131 KQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMG-SLGLLAGKSVHGFIVKNGWELNAEL 189
+ L FR +L E ++P T +V++ C+++ GL+ GK VH + ++ G ELN+ +
Sbjct: 181 EMALEAFR-CMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFI 238
Query: 190 GATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGV 249
TLV MY K G L ++ ++ R++++W ++ Q EAL +M + GV
Sbjct: 239 INTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGV 298
Query: 250 RPNELTFTGVLSACAHAGLVEEGR 273
P+E T + VL AC+H ++ G+
Sbjct: 299 EPDEFTISSVLPACSHLEMLRTGK 322
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 104/432 (24%), Positives = 176/432 (40%), Gaps = 94/432 (21%)
Query: 11 GVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLLNAYV-LLSFL 69
GV D F I L +C SHL L + LHA+ +K G + V + L++ Y L
Sbjct: 297 GVEPDEFTISSVLPAC-SHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVL 355
Query: 70 DACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGS 129
+FD M +R WN MI GYS++ + D
Sbjct: 356 SGRRVFDGMFDRKIGLWNAMIAGYSQN--------------EHD---------------- 385
Query: 130 SKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAEL 189
K+ L LF + G+ + T V+ C G+ +++HGF+VK G + + +
Sbjct: 386 -KEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFS--RKEAIHGFVVKRGLDRDRFV 442
Query: 190 GATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMR---- 245
TL++MY++ G + A +F M +R++++W +I G E+AL++ KM+
Sbjct: 443 QNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLER 502
Query: 246 -------VAGVRPNELTFTGVLSACA-----------HA--------------------- 266
++PN +T +L +CA HA
Sbjct: 503 KVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMY 562
Query: 267 ---GLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVE---PNV 320
G ++ R+ F I + V + ++ G G +EA ++++ M V+ PN
Sbjct: 563 AKCGCLQMSRKVFDQIP----QKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNE 618
Query: 321 VVFGSFLSACKEHKQFEMAERV--IEQVLRMVKPEDDRGIYRLIHDLYVMGEKWEEAAKL 378
V F S +AC + R+ + + V+P D Y + DL + +EA +L
Sbjct: 619 VTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDH--YACVVDLLGRAGRIKEAYQL 676
Query: 379 GPGF--DFNRSG 388
DFN++G
Sbjct: 677 MNMMPRDFNKAG 688
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 106/215 (49%), Gaps = 9/215 (4%)
Query: 145 GIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNA-ELGATLVNMYAKGGVL 203
GIKPD A+L A + + L GK +H + K G+ +++ + TLVN+Y K G
Sbjct: 92 GIKPDNYAFPALLKAVADLQDMEL--GKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDF 149
Query: 204 RNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSAC 263
VF+ + ERN +SW +LI + E AL F M V P+ T V++AC
Sbjct: 150 GAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTAC 209
Query: 264 AHAGLVEEGRRYFKMIEDYGM---EPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNV 320
++ + EG K + YG+ E +LV + GK G+L + ++ + ++
Sbjct: 210 SNLPM-PEGLMMGKQVHAYGLRKGELNSFIINTLVAMYGKLGKLASSKVLLGSFGGR-DL 267
Query: 321 VVFGSFLSA-CKEHKQFEMAERVIEQVLRMVKPED 354
V + + LS+ C+ + E E + E VL V+P++
Sbjct: 268 VTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDE 302
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 105/228 (46%), Gaps = 45/228 (19%)
Query: 9 RTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLLNAYVLLSF 68
R + +S ++ L SC + L +L + +HA+ IK A T + V + L++ Y
Sbjct: 510 RVSLKPNSITLMTILPSCAA-LSALAKGKEIHAYAIKNNLA-TDVAVGSALVDMYAKCGC 567
Query: 69 LDAC-ILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNI 127
L +FD++P +N +TWN +I+ Y G+ Q A ++
Sbjct: 568 LQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLL--------------------- 606
Query: 128 GSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKN---GWE 184
R+++ +G+KP++VT +V + C+H G + + + F V G E
Sbjct: 607 -----------RMMMVQGVKPNEVTFISVFAACSHSG----MVDEGLRIFYVMKPDYGVE 651
Query: 185 LNAELGATLVNMYAKGGVLRNAAMVFELMVE--RNVLSWTALICGAAQ 230
+++ A +V++ + G ++ A + +M +W++L+ GA++
Sbjct: 652 PSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLL-GASR 698
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2761195-2764281 REVERSE
LENGTH=1028
Length = 1028
Score = 177 bits (450), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 114/351 (32%), Positives = 189/351 (53%), Gaps = 40/351 (11%)
Query: 32 SLTIIQHLHAHIIKLGFAPTHLHVANCLLNAYV-LLSFLDACILFDEMPN-RNTVTWNTM 89
SLT+ H I K GF+ ++ LL Y+ +AC LF E+ + ++ V W M
Sbjct: 644 SLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGM 703
Query: 90 IVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPD 149
+ G+S++G +EEA + F + + +G+ PD
Sbjct: 704 MSGHSQNG-------FYEEALK-------------------------FYKEMRHDGVLPD 731
Query: 150 QVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMV 209
Q T VL C+ + SL G+++H I +L+ TL++MYAK G ++ ++ V
Sbjct: 732 QATFVTVLRVCSVLSSL--REGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQV 789
Query: 210 FELMVER-NVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGL 268
F+ M R NV+SW +LI G A+ G+ E+AL +F+ MR + + P+E+TF GVL+AC+HAG
Sbjct: 790 FDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGK 849
Query: 269 VEEGRRYFK-MIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFL 327
V +GR+ F+ MI YG+E +V H A +V L+G+ G L+EA + I+ ++P+ ++ S L
Sbjct: 850 VSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLL 909
Query: 328 SACKEHKQFEMAERVIEQVLRMVKPEDDRGIYRLIHDLYVMGEKWEEAAKL 378
AC+ H E E+++ + +P++ Y L+ ++Y WE+A L
Sbjct: 910 GACRIHGDDIRGEISAEKLIEL-EPQNSSA-YVLLSNIYASQGCWEKANAL 958
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 92/348 (26%), Positives = 168/348 (48%), Gaps = 42/348 (12%)
Query: 3 LYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLLNA 62
L+ +++ G+ D C+ TLK+CT H+H L + +H +K G
Sbjct: 516 LFKRMNLCGIVSDGACLASTLKACT-HVHGLYQGKQVHCLSVKCGL-------------- 560
Query: 63 YVLLSFLDACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMIS 122
+R+ T +++I YS+ G ++ AR+VF P+ VS++++I+
Sbjct: 561 -----------------DRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIA 603
Query: 123 AY--NNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVK 180
Y NN+ ++ + LF+ +L G+ P ++T ++ C SL L G HG I K
Sbjct: 604 GYSQNNL---EEAVVLFQE-MLTRGVNPSEITFATIVEACHKPESLTL--GTQFHGQITK 657
Query: 181 NGWELNAE-LGATLVNMYAKG-GVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEAL 238
G+ E LG +L+ MY G+ A+ EL ++++ WT ++ G +Q GF EEAL
Sbjct: 658 RGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEAL 717
Query: 239 VVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLV 298
+++MR GV P++ TF VL C+ + EGR +I + +L+ +
Sbjct: 718 KFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMY 777
Query: 299 GKSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQV 346
K G ++ + ++ M+ NVV + S ++ ++ E A ++ + +
Sbjct: 778 AKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSM 825
Score = 124 bits (312), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 89/347 (25%), Positives = 162/347 (46%), Gaps = 37/347 (10%)
Query: 1 MHLYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLL 60
M L+ + +G D F L +C + H L + H+ IIK A
Sbjct: 413 MELFMDMKSSGYNIDDFTFTSLLSTCAAS-HDLEMGSQFHSIIIKKKLA----------- 460
Query: 61 NAYVLLSFLDACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSM 120
+N N ++ Y++ G ++ AR++FE RD+V+ +++
Sbjct: 461 --------------------KNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTI 500
Query: 121 ISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVK 180
I +Y + + LF+R+ L GI D + L C H+ GL GK VH VK
Sbjct: 501 IGSYVQDENESEAFDLFKRMNLC-GIVSDGACLASTLKACTHVH--GLYQGKQVHCLSVK 557
Query: 181 NGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVV 240
G + + G++L++MY+K G++++A VF + E +V+S ALI G +Q EEA+V+
Sbjct: 558 CGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNNL-EEAVVL 616
Query: 241 FEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYA-SLVYLVG 299
F++M GV P+E+TF ++ AC + G ++ I G + + SL+ +
Sbjct: 617 FQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYM 676
Query: 300 KSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQV 346
S + EA + + ++V++ +S ++ +E A + +++
Sbjct: 677 NSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEM 723
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 104/356 (29%), Positives = 163/356 (45%), Gaps = 47/356 (13%)
Query: 1 MHLYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLL 60
M+ L + FDSF V L +S + + ++ H++ P+H + LL
Sbjct: 1 MYFRVLLTPSSAMFDSFSFVRRLS------YSPDLGRRIYGHVL-----PSHDQIHQRLL 49
Query: 61 NAYV-LLSFLDACILFDEMPNR--------NTVTWNTMIVG--------------YSRSG 97
+ + +FDEMP R V ++I+G Y++
Sbjct: 50 EICLGQCKLFKSRKVFDEMPQRLALALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCA 109
Query: 98 DVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEG-IKPDQVTAGAV 156
V A + F+ ++D + +SM+S Y++IG K G L V LFE I P++ T V
Sbjct: 110 QVSYAEKQFD-FLEKDVTAWNSMLSMYSSIG--KPGKVLRSFVSLFENQIFPNKFTFSIV 166
Query: 157 LSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVER 216
LS CA ++ G+ +H ++K G E N+ G LV+MYAK + +A VFE +V+
Sbjct: 167 LSTCARETNVEF--GRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDP 224
Query: 217 NVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYF 276
N + WT L G + G EEA++VFE+MR G RP+ L F V++ G +++ R F
Sbjct: 225 NTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLF 284
Query: 277 KMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMK---VEPNVVVFGSFLSA 329
+ P V + ++ GK G A E M+ V+ GS LSA
Sbjct: 285 GEMS----SPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSA 336
Score = 111 bits (277), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 144/294 (48%), Gaps = 11/294 (3%)
Query: 57 NCLLNAYVLLSFLDACILF-----DEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQ 111
CL + YV + +L DE + + + T+I Y R G ++ AR +F E
Sbjct: 230 TCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSS 289
Query: 112 RDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAG 171
D V+ + MIS + G + F + +K + T G+VLS + +L L G
Sbjct: 290 PDVVAWNVMISGHGKRGCETVAIEYFFN-MRKSSVKSTRSTLGSVLSAIGIVANLDL--G 346
Query: 172 KSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQW 231
VH +K G N +G++LV+MY+K + AA VFE + E+N + W A+I G A
Sbjct: 347 LVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHN 406
Query: 232 GFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHY 291
G + + +F M+ +G ++ TFT +LS CA + +E G ++ +I + +
Sbjct: 407 GESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVG 466
Query: 292 ASLVYLVGKSGRLEEAYEIIKTMKVEPNV---VVFGSFLSACKEHKQFEMAERV 342
+LV + K G LE+A +I + M NV + GS++ E + F++ +R+
Sbjct: 467 NALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRM 520
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 132/273 (48%), Gaps = 4/273 (1%)
Query: 82 NTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVL 141
N ++++ YS+ ++ A +VFE +++ V ++MI Y + G S + + LF +
Sbjct: 361 NIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMD-M 419
Query: 142 LFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGG 201
G D T ++LS CA S L G H I+K N +G LV+MYAK G
Sbjct: 420 KSSGYNIDDFTFTSLLSTCA--ASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCG 477
Query: 202 VLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLS 261
L +A +FE M +R+ ++W +I Q EA +F++M + G+ + L
Sbjct: 478 ALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLK 537
Query: 262 ACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVV 321
AC H + +G++ + G++ +H +SL+ + K G +++A ++ ++ E +VV
Sbjct: 538 ACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLP-EWSVV 596
Query: 322 VFGSFLSACKEHKQFEMAERVIEQVLRMVKPED 354
+ ++ ++ E E + R V P +
Sbjct: 597 SMNALIAGYSQNNLEEAVVLFQEMLTRGVNPSE 629
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 79/347 (22%), Positives = 144/347 (41%), Gaps = 59/347 (17%)
Query: 1 MHLYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLL 60
+ Y ++ GV D V L+ C S L SL + +H+ I L L +N L+
Sbjct: 717 LKFYKEMRHDGVLPDQATFVTVLRVC-SVLSSLREGRAIHSLIFHLAHDLDEL-TSNTLI 774
Query: 61 NAYVLLSFLD-ACILFDEMPNR-NTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLS 118
+ Y + + +FDEM R N V+WN++I GY+++G + A ++F+ Q
Sbjct: 775 DMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSH----- 829
Query: 119 SMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFI 178
I PD++T VL+ C+H G + G+ + +
Sbjct: 830 ---------------------------IMPDEITFLGVLTACSHAGKVS--DGRKIFEMM 860
Query: 179 V-KNGWELNAELGATLVNMYAKGGVLRNAAMVFELM-VERNVLSWTALICGAAQWGFCEE 236
+ + G E + A +V++ + G L+ A E ++ + W++L+ G
Sbjct: 861 IGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGDDIR 920
Query: 237 ALVVFEKMRVAGVRPNELTFTGVLSAC-AHAGLVEEGRRYFKMIEDYG-----------M 284
+ EK+ + P + +LS A G E+ K++ D G +
Sbjct: 921 GEISAEKL--IELEPQNSSAYVLLSNIYASQGCWEKANALRKVMRDRGVKKVPGYSWIDV 978
Query: 285 EPKVHHYASLVYLVGKSGR----LEEAYEIIKTMK-VEPNVVVFGSF 326
E + H +A+ + G+ LE+ Y+++K V P++V GS
Sbjct: 979 EQRTHIFAAGDKSHSEIGKIEMFLEDLYDLMKDDAVVNPDIVEQGSL 1025
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 177 bits (449), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 118/382 (30%), Positives = 206/382 (53%), Gaps = 47/382 (12%)
Query: 2 HLYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLLN 61
HL K+ +G+ DSF + L +C S L SL + + +H II+ + L V +L+
Sbjct: 484 HLQMKI--SGLLPDSFTVCSLLSAC-SKLKSLRLGKEVHGFIIR-NWLERDLFVYLSVLS 539
Query: 62 AYVLLSFL-DACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSM 120
Y+ L LFD M +++ V+WNT+
Sbjct: 540 LYIHCGELCTVQALFDAMEDKSLVSWNTV------------------------------- 568
Query: 121 ISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVK 180
I+ Y G + L +FR+++L+ GI+ ++ V C+ + SL L G+ H + +K
Sbjct: 569 ITGYLQNGFPDRALGVFRQMVLY-GIQLCGISMMPVFGACSLLPSLRL--GREAHAYALK 625
Query: 181 NGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVV 240
+ E +A + +L++MYAK G + ++ VF + E++ SW A+I G G +EA+ +
Sbjct: 626 HLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKL 685
Query: 241 FEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYF-KMIEDYGMEPKVHHYASLVYLVG 299
FE+M+ G P++LTF GVL+AC H+GL+ EG RY +M +G++P + HYA ++ ++G
Sbjct: 686 FEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLG 745
Query: 300 KSGRLEEAYEII-KTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRM--VKPEDDR 356
++G+L++A ++ + M E +V ++ S LS+C+ H+ EM E+V ++ + KPE+
Sbjct: 746 RAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPEN-- 803
Query: 357 GIYRLIHDLYVMGEKWEEAAKL 378
Y L+ +LY KWE+ K+
Sbjct: 804 --YVLLSNLYAGLGKWEDVRKV 823
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 93/188 (49%), Gaps = 7/188 (3%)
Query: 87 NTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEG- 145
N ++ Y G V A ++F+ P+R+ VS +SMI +++ G S++ L ++ G
Sbjct: 226 NALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGD 285
Query: 146 --IKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVL 203
PD T VL CA +GL GK VHG+ VK + L L++MY+K G +
Sbjct: 286 GAFMPDVATLVTVLPVCAREREIGL--GKGVHGWAVKLRLDKELVLNNALMDMYSKCGCI 343
Query: 204 RNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAG--VRPNELTFTGVLS 261
NA M+F++ +NV+SW ++ G + G V +M G V+ +E+T +
Sbjct: 344 TNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVP 403
Query: 262 ACAHAGLV 269
C H +
Sbjct: 404 VCFHESFL 411
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 123/270 (45%), Gaps = 11/270 (4%)
Query: 82 NTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVL 141
+ V +I Y+ G +R VF+ ++ +++IS+Y+ + L F ++
Sbjct: 119 DDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMI 178
Query: 142 LFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGG 201
+ PD T V+ CA M +G+ G +VHG +VK G + +G LV+ Y G
Sbjct: 179 STTDLLPDHFTYPCVIKACAGMSDVGI--GLAVHGLVVKTGLVEDVFVGNALVSFYGTHG 236
Query: 202 VLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRV----AGVRPNELTFT 257
+ +A +F++M ERN++SW ++I + GF EE+ ++ +M P+ T
Sbjct: 237 FVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLV 296
Query: 258 GVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVE 317
VL CA + G+ ++ ++ +L+ + K G + A I K M
Sbjct: 297 TVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFK-MNNN 355
Query: 318 PNVV----VFGSFLSACKEHKQFEMAERVI 343
NVV + G F + H F++ +++
Sbjct: 356 KNVVSWNTMVGGFSAEGDTHGTFDVLRQML 385
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 114/250 (45%), Gaps = 7/250 (2%)
Query: 80 NRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRR 139
++ V N ++ YS+ G + A+ +F+ ++ VS ++M+ ++ G + + R+
Sbjct: 324 DKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQ 383
Query: 140 VLLF-EGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYA 198
+L E +K D+VT + C H L L K +H + +K + N + V YA
Sbjct: 384 MLAGGEDVKADEVTILNAVPVCFHESFLPSL--KELHCYSLKQEFVYNELVANAFVASYA 441
Query: 199 KGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTG 258
K G L A VF + + V SW ALI G AQ +L +M+++G+ P+ T
Sbjct: 442 KCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCS 501
Query: 259 VLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMK--- 315
+LSAC+ + G+ I +E + Y S++ L G L + M+
Sbjct: 502 LLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKS 561
Query: 316 -VEPNVVVFG 324
V N V+ G
Sbjct: 562 LVSWNTVITG 571
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 176 bits (447), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 99/306 (32%), Positives = 171/306 (55%), Gaps = 5/306 (1%)
Query: 73 ILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQ 132
++F N + + +I YS ++ +R VF+E +D V +SM + Y +++
Sbjct: 479 LMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEE 538
Query: 133 GLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGAT 192
L+LF + L +PD+ T +++ ++ S+ L G+ H ++K G E N +
Sbjct: 539 ALNLFLELQLSRE-RPDEFTFANMVTAAGNLASVQL--GQEFHCQLLKRGLECNPYITNA 595
Query: 193 LVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPN 252
L++MYAK G +A F+ R+V+ W ++I A G ++AL + EKM G+ PN
Sbjct: 596 LLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPN 655
Query: 253 ELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIK 312
+TF GVLSAC+HAGLVE+G + F+++ +G+EP+ HY +V L+G++GRL +A E+I+
Sbjct: 656 YITFVGVLSACSHAGLVEDGLKQFELMLRFGIEPETEHYVCMVSLLGRAGRLNKARELIE 715
Query: 313 TMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPEDDRGIYRLIHDLYVMGEKW 372
M +P +V+ S LS C + E+AE E + ++ D G + ++ ++Y W
Sbjct: 716 KMPTKPAAIVWRSLLSGCAKAGNVELAEHAAE--MAILSDPKDSGSFTMLSNIYASKGMW 773
Query: 373 EEAAKL 378
EA K+
Sbjct: 774 TEAKKV 779
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/350 (25%), Positives = 175/350 (50%), Gaps = 39/350 (11%)
Query: 1 MHLYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLL 60
M L++ + + G+ D + L SC S LH+L +HA+ IK AN
Sbjct: 335 MELFTSMSKFGLKPDMYACSSILTSCAS-LHALGFGTQVHAYTIK----------ANLGN 383
Query: 61 NAYVLLSFLDACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSM 120
++YV N++I Y++ + AR+VF+ D V ++M
Sbjct: 384 DSYVT---------------------NSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAM 422
Query: 121 ISAYNNIGSS---KQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGF 177
I Y+ +G+ + L++FR + F I+P +T ++L A + SLGL K +HG
Sbjct: 423 IEGYSRLGTQWELHEALNIFRD-MRFRLIRPSLLTFVSLLRASASLTSLGL--SKQIHGL 479
Query: 178 IVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEA 237
+ K G L+ G+ L+++Y+ L+++ +VF+ M ++++ W ++ G Q EEA
Sbjct: 480 MFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEA 539
Query: 238 LVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYL 297
L +F +++++ RP+E TF +++A + V+ G+ + + G+E + +L+ +
Sbjct: 540 LNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDM 599
Query: 298 VGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVL 347
K G E+A++ + +VV + S +S+ H + + A +++E+++
Sbjct: 600 YAKCGSPEDAHKAFDS-AASRDVVCWNSVISSYANHGEGKKALQMLEKMM 648
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 131/252 (51%), Gaps = 1/252 (0%)
Query: 82 NTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVL 141
+T N +I YSR+G + AR+VFE+ P+R+ VS S+M+SA N+ G ++ L +F
Sbjct: 78 DTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFW 137
Query: 142 LFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGG 201
P++ + + C+ + G + F+VK+G++ + +G L++ Y K G
Sbjct: 138 RTRKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDG 197
Query: 202 VLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLS 261
+ A +VF+ + E++ ++WT +I G + G +L +F ++ V P+ + VLS
Sbjct: 198 NIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLS 257
Query: 262 ACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVV 321
AC+ +E G++ I YG+E L+ K GR+ A+++ M N++
Sbjct: 258 ACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMP-NKNII 316
Query: 322 VFGSFLSACKEH 333
+ + LS K++
Sbjct: 317 SWTTLLSGYKQN 328
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 86/358 (24%), Positives = 162/358 (45%), Gaps = 40/358 (11%)
Query: 1 MHLYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLL 60
+ L+ +L V D + + L +C S L L + +HAHI++ G
Sbjct: 234 LQLFYQLMEDNVVPDGYILSTVLSAC-SILPFLEGGKQIHAHILRYGLE----------- 281
Query: 61 NAYVLLSFLDACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSM 120
+DA ++ N +I Y + G V A ++F P ++ +S +++
Sbjct: 282 --------MDASLM------------NVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTL 321
Query: 121 ISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVK 180
+S Y K+ + LF + F G+KPD ++L+ CA + +LG G VH + +K
Sbjct: 322 LSGYKQNALHKEAMELFTSMSKF-GLKPDMYACSSILTSCASLHALGF--GTQVHAYTIK 378
Query: 181 NGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICG----AAQWGFCEE 236
++ + +L++MYAK L +A VF++ +V+ + A+I G QW E
Sbjct: 379 ANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWEL-HE 437
Query: 237 ALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVY 296
AL +F MR +RP+ LTF +L A A + ++ ++ YG+ + ++L+
Sbjct: 438 ALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALID 497
Query: 297 LVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPED 354
+ L+++ + MKV+ V+ F ++ + E +E L +P++
Sbjct: 498 VYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDE 555
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 150/314 (47%), Gaps = 28/314 (8%)
Query: 61 NAYVLLSFLDAC----------------ILFDEMPNRNTVTWNTMIVGYSRSGDVQRARE 104
N Y+L SF+ AC L +R+ +I Y + G++ AR
Sbjct: 145 NEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARL 204
Query: 105 VFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMG 164
VF+ P++ +V+ ++MIS +G S L LF + L+ + + PD VLS C+ +
Sbjct: 205 VFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQ-LMEDNVVPDGYILSTVLSACSILP 263
Query: 165 SLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTAL 224
L GK +H I++ G E++A L L++ Y K G + A +F M +N++SWT L
Sbjct: 264 FLE--GGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTL 321
Query: 225 ICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRY--FKMIEDY 282
+ G Q +EA+ +F M G++P+ + +L++CA + G + + + +
Sbjct: 322 LSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANL 381
Query: 283 GMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSA-CKEHKQFEMAER 341
G + V + SL+ + K L +A ++ +VV+F + + + Q+E+ E
Sbjct: 382 GNDSYVTN--SLIDMYAKCDCLTDARKVFDIFAA-ADVVLFNAMIEGYSRLGTQWELHEA 438
Query: 342 V---IEQVLRMVKP 352
+ + R+++P
Sbjct: 439 LNIFRDMRFRLIRP 452
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 80/162 (49%), Gaps = 8/162 (4%)
Query: 174 VHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGF 233
VHG I+ G EL+ L L+N+Y++ G + A VFE M ERN++SW+ ++ G
Sbjct: 66 VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGI 125
Query: 234 CEEALVVF-EKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDY----GMEPKV 288
EE+LVVF E R PNE + + AC +GL GR ++ + G + V
Sbjct: 126 YEESLVVFLEFWRTRKDSPNEYILSSFIQAC--SGLDGRGRWMVFQLQSFLVKSGFDRDV 183
Query: 289 HHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSAC 330
+ L+ K G ++ A + + E + V + + +S C
Sbjct: 184 YVGTLLIDFYLKDGNIDYARLVFDALP-EKSTVTWTTMISGC 224
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 176 bits (445), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 99/289 (34%), Positives = 171/289 (59%), Gaps = 7/289 (2%)
Query: 87 NTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEG- 145
N ++V Y++ G V AR VF P D +S +++IS Y G + + + ++ ++ EG
Sbjct: 388 NAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYN-IMEEEGE 446
Query: 146 IKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRN 205
I +Q T +VL C+ G+L G +HG ++KNG L+ + +L +MY K G L +
Sbjct: 447 IAANQGTWVSVLPACSQAGAL--RQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLED 504
Query: 206 AAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAH 265
A +F + N + W LI G E+A+++F++M GV+P+ +TF +LSAC+H
Sbjct: 505 ALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSH 564
Query: 266 AGLVEEGRRYFKMIE-DYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFG 324
+GLV+EG+ F+M++ DYG+ P + HY +V + G++G+LE A + IK+M ++P+ ++G
Sbjct: 565 SGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWG 624
Query: 325 SFLSACKEHKQFEMAERVIEQVLRMVKPEDDRGIYRLIHDLYVMGEKWE 373
+ LSAC+ H ++ + E + V+PE G + L+ ++Y KWE
Sbjct: 625 ALLSACRVHGNVDLGKIASEHLFE-VEPE-HVGYHVLLSNMYASAGKWE 671
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 78/242 (32%), Positives = 130/242 (53%), Gaps = 9/242 (3%)
Query: 87 NTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGI 146
N +I Y+ G ++ ++VF+ RD +S +S+I AY + +SLF+ + L I
Sbjct: 286 NKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRL-SRI 344
Query: 147 KPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWEL-NAELGATLVNMYAKGGVLRN 205
+PD +T ++ S + +G + A +SV GF ++ GW L + +G +V MYAK G++ +
Sbjct: 345 QPDCLTLISLASILSQLGDI--RACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDS 402
Query: 206 AAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAG-VRPNELTFTGVLSACA 264
A VF + +V+SW +I G AQ GF EA+ ++ M G + N+ T+ VL AC+
Sbjct: 403 ARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACS 462
Query: 265 HAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEA----YEIIKTMKVEPNV 320
AG + +G + + G+ V SL + GK GRLE+A Y+I + V N
Sbjct: 463 QAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNT 522
Query: 321 VV 322
++
Sbjct: 523 LI 524
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 129/262 (49%), Gaps = 11/262 (4%)
Query: 93 YSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVT 152
Y G+V AR F+ RD + + MIS Y G+S + + F +L G+ PD T
Sbjct: 96 YCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRT 155
Query: 153 AGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFEL 212
+VL C ++ G +H +K G+ + + A+L+++Y++ + NA ++F+
Sbjct: 156 FPSVLKACR-----TVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDE 210
Query: 213 MVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEG 272
M R++ SW A+I G Q G +EAL + +R + +T +LSAC AG G
Sbjct: 211 MPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAM----DSVTVVSLLSACTEAGDFNRG 266
Query: 273 RRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKE 332
+G+E ++ L+ L + GRL + ++ M V +++ + S + A +
Sbjct: 267 VTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVR-DLISWNSIIKAYEL 325
Query: 333 HKQFEMAERVIEQV-LRMVKPE 353
++Q A + +++ L ++P+
Sbjct: 326 NEQPLRAISLFQEMRLSRIQPD 347
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 120/265 (45%), Gaps = 44/265 (16%)
Query: 10 TGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLLNAYVLLSFL 69
+G+ D LK+C + + +H +K GF ++VA L++ Y +
Sbjct: 147 SGLTPDYRTFPSVLKACRTVIDG----NKIHCLALKFGFM-WDVYVAASLIHLYSRYKAV 201
Query: 70 -DACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIG 128
+A ILFDEMP R+ +WN MI GY +SG+ + A + DSV++ S++SA G
Sbjct: 202 GNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAMDSVTVVSLLSACTEAG 261
Query: 129 SSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAE 188
+G+ ++H + +K+G E
Sbjct: 262 DFNRGV--------------------------------------TIHSYSIKHGLESELF 283
Query: 189 LGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAG 248
+ L+++YA+ G LR+ VF+ M R+++SW ++I A+ +F++MR++
Sbjct: 284 VSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSR 343
Query: 249 VRPNELTFTGVLSACAHAGLVEEGR 273
++P+ LT + S + G + R
Sbjct: 344 IQPDCLTLISLASILSQLGDIRACR 368
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 81/201 (40%), Gaps = 36/201 (17%)
Query: 168 LLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICG 227
L + K +H +V + N + A LVN+Y G + A F+ + R+V +W +I G
Sbjct: 67 LQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISG 126
Query: 228 AAQWGFCEEALVVFEK-MRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEP 286
+ G E + F M +G+ P+ TF VL AC V +G + + +G
Sbjct: 127 YGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACR---TVIDGNKIHCLALKFGFMW 183
Query: 287 KVHHYASLVYLVGK-------------------------------SGRLEEAYEIIKTMK 315
V+ ASL++L + SG +EA + ++
Sbjct: 184 DVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLR 243
Query: 316 VEPNVVVFGSFLSACKEHKQF 336
+V V S LSAC E F
Sbjct: 244 AMDSVTVV-SLLSACTEAGDF 263
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 175 bits (444), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 98/300 (32%), Positives = 172/300 (57%), Gaps = 6/300 (2%)
Query: 80 NRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRR 139
+ + V W++++ Y + G + AR +F++ ++D VS +SMI Y ++G SLF
Sbjct: 250 DSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSE 309
Query: 140 VLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAK 199
L+ +P++ T VL+ CA + + L GK VHG++ + G++ + ++LV+MY K
Sbjct: 310 -LVGSCERPNEYTFAGVLNACADLTTEEL--GKQVHGYMTRVGFDPYSFASSSLVDMYTK 366
Query: 200 GGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGV 259
G + +A V + + +++SWT+LI G AQ G +EAL F+ + +G +P+ +TF V
Sbjct: 367 CGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNV 426
Query: 260 LSACAHAGLVEEGRRYFKMI-EDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEP 318
LSAC HAGLVE+G +F I E + + HY LV L+ +SGR E+ +I M ++P
Sbjct: 427 LSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKP 486
Query: 319 NVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPEDDRGIYRLIHDLYVMGEKWEEAAKL 378
+ ++ S L C + ++AE +++ + ++PE+ Y + ++Y KWEE K+
Sbjct: 487 SKFLWASVLGGCSTYGNIDLAEEAAQELFK-IEPENPV-TYVTMANIYAAAGKWEEEGKM 544
Score = 158 bits (400), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 101/343 (29%), Positives = 179/343 (52%), Gaps = 9/343 (2%)
Query: 13 PFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLLNAYVLL-SFLDA 71
P ++C L S +L + +H HI GF P + + N LL Y S +DA
Sbjct: 84 PASTYC---NLIQVCSQTRALEEGKKVHEHIRTSGFVPG-IVIWNRLLRMYAKCGSLVDA 139
Query: 72 CILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSK 131
+FDEMPNR+ +WN M+ GY+ G ++ AR++F+E ++DS S ++M++ Y +
Sbjct: 140 RKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPE 199
Query: 132 QGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGA 191
+ L L+ + +P+ T ++ A + GK +HG IV+ G + + L +
Sbjct: 200 EALVLYSLMQRVPNSRPNIFTVS--IAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWS 257
Query: 192 TLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRP 251
+L++MY K G + A +F+ +VE++V+SWT++I + E +F ++ + RP
Sbjct: 258 SLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERP 317
Query: 252 NELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEII 311
NE TF GVL+ACA E G++ + G +P +SLV + K G +E A ++
Sbjct: 318 NEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVV 377
Query: 312 KTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRM-VKPE 353
+P++V + S + C ++ Q + A + + +L+ KP+
Sbjct: 378 DGCP-KPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPD 419
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 175 bits (444), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 106/369 (28%), Positives = 202/369 (54%), Gaps = 14/369 (3%)
Query: 14 FDSFCIVFT--LKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLLNAYVLL-SFLD 70
F C F+ + +C++ ++ + +HA ++K G++ + + N +L+ Y L S D
Sbjct: 200 FKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWS-SAVEAKNSVLSFYTKLGSRDD 258
Query: 71 ACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSS 130
A + + V+WN++I + G+ ++A EVF AP+++ V+ ++MI+ Y G
Sbjct: 259 AMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDG 318
Query: 131 KQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELG 190
+Q L F ++ G+ D GAVL C+ + LG GK +HG ++ G++ A +G
Sbjct: 319 EQALRFFVE-MMKSGVDSDHFAYGAVLHACSGLALLG--HGKMIHGCLIHCGFQGYAYVG 375
Query: 191 ATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVR 250
LVN+YAK G ++ A F + ++++SW ++ G ++AL +++ M +G++
Sbjct: 376 NALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQALKLYDNMIASGIK 435
Query: 251 PNELTFTGVLSACAHAGLVEEGRRYFK-MIEDYGMEPKVHHYASLVYLVGKSGRLEEAYE 309
P+ +TF G+L+ C+H+GLVEEG F+ M++DY + +V H ++ + G+ G L EA +
Sbjct: 436 PDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCMIDMFGRGGHLAEAKD 495
Query: 310 IIKT----MKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPEDDRGIYRLIHDL 365
+ T + N + + L AC H E+ R + +VL++ +P ++ + L+ +L
Sbjct: 496 LATTYSSLVTDSSNNSSWETLLGACSTHWHTELG-REVSKVLKIAEPSEEMS-FVLLSNL 553
Query: 366 YVMGEKWEE 374
Y +W+E
Sbjct: 554 YCSTGRWKE 562
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 100/388 (25%), Positives = 183/388 (47%), Gaps = 42/388 (10%)
Query: 3 LYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLLNA 62
L+++L + D + L +C S L ++ + + + +I+ GF + L V N L++
Sbjct: 57 LFTQLRFSDAKPDDYSFTAILSTCAS-LGNVKFGRKIQSLVIRSGFCAS-LPVNNSLIDM 114
Query: 63 YVLLS-FLDACILFDEM--PNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSS 119
Y S L A +F +M +RN VTW +++ Y + + A +VF E P+R + + +
Sbjct: 115 YGKCSDTLSANKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNI 174
Query: 120 MISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIV 179
MIS + + G + LSLF+ +L E KPD T ++++ C+ S ++ G+ VH ++
Sbjct: 175 MISGHAHCGKLESCLSLFKEMLESE-FKPDCYTFSSLMNACS-ADSSNVVYGRMVHAVML 232
Query: 180 KNGWELNAELGATLVNMYAKGGVLRNAAM------------------------------- 208
KNGW E ++++ Y K G R+ AM
Sbjct: 233 KNGWSSAVEAKNSVLSFYTKLGS-RDDAMRELESIEVLTQVSWNSIIDACMKIGETEKAL 291
Query: 209 -VFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAG 267
VF L E+N+++WT +I G + G E+AL F +M +GV + + VL AC+
Sbjct: 292 EVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLA 351
Query: 268 LVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFL 327
L+ G+ + G + + +LV L K G ++EA + ++V + + L
Sbjct: 352 LLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDI-ANKDLVSWNTML 410
Query: 328 SACKEHKQFEMAERVIEQVLRM-VKPED 354
A H + A ++ + ++ +KP++
Sbjct: 411 FAFGVHGLADQALKLYDNMIASGIKPDN 438
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 140/293 (47%), Gaps = 38/293 (12%)
Query: 84 VTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLF 143
V + I ++SG + AR+VF+ P+ D+V+ ++M+++Y+ +G ++ ++LF + L F
Sbjct: 5 VRLTSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQ-LRF 63
Query: 144 EGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAK---- 199
KPD + A+LS CA +G++ G+ + ++++G+ + + +L++MY K
Sbjct: 64 SDAKPDDYSFTAILSTCASLGNVKF--GRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDT 121
Query: 200 ---GGVLRN--------------------------AAMVFELMVERNVLSWTALICGAAQ 230
V R+ A VF M +R +W +I G A
Sbjct: 122 LSANKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAH 181
Query: 231 WGFCEEALVVFEKMRVAGVRPNELTFTGVLSAC-AHAGLVEEGRRYFKMIEDYGMEPKVH 289
G E L +F++M + +P+ TF+ +++AC A + V GR ++ G V
Sbjct: 182 CGKLESCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVE 241
Query: 290 HYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERV 342
S++ K G ++A +++++V V + S + AC + + E A V
Sbjct: 242 AKNSVLSFYTKLGSRDDAMRELESIEVLTQ-VSWNSIIDACMKIGETEKALEV 293
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 80/154 (51%), Gaps = 1/154 (0%)
Query: 198 AKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFT 257
AK G + +A VF+ M E + ++W ++ ++ G +EA+ +F ++R + +P++ +FT
Sbjct: 15 AKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKPDDYSFT 74
Query: 258 GVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVE 317
+LS CA G V+ GR+ ++ G + SL+ + GK A ++ + M +
Sbjct: 75 AILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCCD 134
Query: 318 P-NVVVFGSFLSACKEHKQFEMAERVIEQVLRMV 350
N V + S L A +QFE A V ++ + V
Sbjct: 135 SRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRV 168
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 174 bits (441), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 99/301 (32%), Positives = 171/301 (56%), Gaps = 17/301 (5%)
Query: 87 NTMIVGYSRSGDVQRAREVFEE--APQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFE 144
N +I Y++ V AR +F+ +RD V+ + MI Y+ G + + L L +FE
Sbjct: 411 NQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSE--MFE 468
Query: 145 ---GIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAE---LGATLVNMYA 198
+P+ T L CA + +L + GK +H + ++N + NA + L++MYA
Sbjct: 469 EDCQTRPNAFTISCALVACASLAALRI--GKQIHAYALRN--QQNAVPLFVSNCLIDMYA 524
Query: 199 KGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTG 258
K G + +A +VF+ M+ +N ++WT+L+ G G+ EEAL +F++MR G + + +T
Sbjct: 525 KCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLV 584
Query: 259 VLSACAHAGLVEEGRRYF-KMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVE 317
VL AC+H+G++++G YF +M +G+ P HYA LV L+G++GRL A +I+ M +E
Sbjct: 585 VLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPME 644
Query: 318 PNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPEDDRGIYRLIHDLYVMGEKWEEAAK 377
P VV+ +FLS C+ H + E+ E E++ + D G Y L+ +LY +W++ +
Sbjct: 645 PPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHD--GSYTLLSNLYANAGRWKDVTR 702
Query: 378 L 378
+
Sbjct: 703 I 703
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 106/371 (28%), Positives = 182/371 (49%), Gaps = 32/371 (8%)
Query: 1 MHLYSKL-HRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCL 59
+ ++S++ + G D+ +V L C S L + ++ + LH + ++ V NCL
Sbjct: 213 LEMFSRMTNEFGCRPDNITLVNVLPPCAS-LGTHSLGKQLHCFAVTSEMI-QNMFVGNCL 270
Query: 60 LNAYVLLSFLD-ACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVF----EEAPQRDS 114
++ Y +D A +F M ++ V+WN M+ GYS+ G + A +F EE + D
Sbjct: 271 VDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDV 330
Query: 115 VSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSV 174
V+ S+ IS Y G + L + R+ +L GIKP++VT +VLSGCA +G+ L+ GK +
Sbjct: 331 VTWSAAISGYAQRGLGYEALGVCRQ-MLSSGIKPNEVTLISVLSGCASVGA--LMHGKEI 387
Query: 175 HGFIV-------KNGWELNAELGATLVNMYAKGGVLRNAAMVFELMV--ERNVLSWTALI 225
H + + KNG + L++MYAK + A +F+ + ER+V++WT +I
Sbjct: 388 HCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMI 447
Query: 226 CGAAQWGFCEEALVVFEKM--RVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYG 283
G +Q G +AL + +M RPN T + L ACA + G K I Y
Sbjct: 448 GGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIG----KQIHAYA 503
Query: 284 MEPK---VHHYAS--LVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEM 338
+ + V + S L+ + K G + +A + M + N V + S ++ H E
Sbjct: 504 LRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAK-NEVTWTSLMTGYGMHGYGEE 562
Query: 339 AERVIEQVLRM 349
A + +++ R+
Sbjct: 563 ALGIFDEMRRI 573
Score = 118 bits (296), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 75/229 (32%), Positives = 119/229 (51%), Gaps = 2/229 (0%)
Query: 82 NTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVL 141
N N ++ YSR + AR+VF+E D VS +S+I +Y +G K L +F R+
Sbjct: 161 NVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMT 220
Query: 142 LFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGG 201
G +PD +T VL CA +G+ L GK +H F V + N +G LV+MYAK G
Sbjct: 221 NEFGCRPDNITLVNVLPPCASLGTHSL--GKQLHCFAVTSEMIQNMFVGNCLVDMYAKCG 278
Query: 202 VLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLS 261
++ A VF M ++V+SW A++ G +Q G E+A+ +FEKM+ ++ + +T++ +S
Sbjct: 279 MMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAIS 338
Query: 262 ACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEI 310
A GL E + + G++P S++ G L EI
Sbjct: 339 GYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEI 387
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 120/261 (45%), Gaps = 7/261 (2%)
Query: 89 MIVGYSRSGDVQRAREVFEEAPQRDS--VSLSSMISAYNNIGSSKQGLSLFRRVLLFEGI 146
+I Y G + A + P D+ +S+I +Y + G + + L LF ++
Sbjct: 65 LISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFG-LMHSLSW 123
Query: 147 KPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNA 206
PD T V C + S+ G+S H + G+ N +G LV MY++ L +A
Sbjct: 124 TPDNYTFPFVFKACGEISSV--RCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDA 181
Query: 207 AMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVA-GVRPNELTFTGVLSACAH 265
VF+ M +V+SW ++I A+ G + AL +F +M G RP+ +T VL CA
Sbjct: 182 RKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCAS 241
Query: 266 AGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGS 325
G G++ M + LV + K G ++EA + M V+ +VV + +
Sbjct: 242 LGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVK-DVVSWNA 300
Query: 326 FLSACKEHKQFEMAERVIEQV 346
++ + +FE A R+ E++
Sbjct: 301 MVAGYSQIGRFEDAVRLFEKM 321
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 73/139 (52%), Gaps = 6/139 (4%)
Query: 15 DSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLLNAYVLL-SFLDACI 73
++F I L +C S L +L I + +HA+ ++ L V+NCL++ Y S DA +
Sbjct: 476 NAFTISCALVACAS-LAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARL 534
Query: 74 LFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAP----QRDSVSLSSMISAYNNIGS 129
+FD M +N VTW +++ GY G + A +F+E + D V+L ++ A ++ G
Sbjct: 535 VFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGM 594
Query: 130 SKQGLSLFRRVLLFEGIKP 148
QG+ F R+ G+ P
Sbjct: 595 IDQGMEYFNRMKTVFGVSP 613
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 174 bits (440), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 114/365 (31%), Positives = 186/365 (50%), Gaps = 38/365 (10%)
Query: 15 DSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLLNAYVLLSFLDACIL 74
D F F LKSC + S+ +H +I+ GF LD
Sbjct: 106 DLFTFNFALKSC-ERIKSIPKCLEIHGSVIRSGF--------------------LD---- 140
Query: 75 FDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGL 134
+ + +++ YS +G V+ A +VF+E P RD VS + MI ++++G Q L
Sbjct: 141 -------DAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQAL 193
Query: 135 SLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLV 194
S+++R + EG+ D T A+LS CAH+ +L + G +H E + L+
Sbjct: 194 SMYKR-MGNEGVCGDSYTLVALLSSCAHVSALNM--GVMLHRIACDIRCESCVFVSNALI 250
Query: 195 NMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNEL 254
+MYAK G L NA VF M +R+VL+W ++I G G EA+ F KM +GVRPN +
Sbjct: 251 DMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAI 310
Query: 255 TFTGVLSACAHAGLVEEGRRYFK-MIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKT 313
TF G+L C+H GLV+EG +F+ M + + P V HY +V L G++G+LE + E+I
Sbjct: 311 TFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEMIYA 370
Query: 314 MKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPEDDRGIYRLIHDLYVMGEKWE 373
+ V++ + L +CK H+ E+ E +++++++ + G Y L+ +Y +
Sbjct: 371 SSCHEDPVLWRTLLGSCKIHRNLELGEVAMKKLVQL--EAFNAGDYVLMTSIYSAANDAQ 428
Query: 374 EAAKL 378
A +
Sbjct: 429 AFASM 433
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 104/230 (45%), Gaps = 43/230 (18%)
Query: 1 MHLYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLL 60
+ +Y ++ GV DS+ +V L SC +H+ +L + LH + + + V+N L+
Sbjct: 193 LSMYKRMGNEGVCGDSYTLVALLSSC-AHVSALNMGVMLHRIACDIR-CESCVFVSNALI 250
Query: 61 NAYVLLSFLDACI-LFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSS 119
+ Y L+ I +F+ M R+ +TWN+MI+GY G
Sbjct: 251 DMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGH--------------------- 289
Query: 120 MISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGF-I 178
+ +S FR+ ++ G++P+ +T +L GC+H G L + V F I
Sbjct: 290 ----------GVEAISFFRK-MVASGVRPNAITFLGLLLGCSHQG----LVKEGVEHFEI 334
Query: 179 VKNGWEL--NAELGATLVNMYAKGGVLRNA-AMVFELMVERNVLSWTALI 225
+ + + L N + +V++Y + G L N+ M++ + + W L+
Sbjct: 335 MSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEMIYASSCHEDPVLWRTLL 384
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 174 bits (440), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 105/301 (34%), Positives = 165/301 (54%), Gaps = 21/301 (6%)
Query: 87 NTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGI 146
NT I YS+S D AR +F+ R VS + MIS Y G + L+LF ++ G
Sbjct: 295 NTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFH-AMIKSGE 353
Query: 147 KPDQVTAGAVLSGCAHMGSLG----LLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGV 202
KPD VT +++SGC GSL + A ++G N NA L++MY+K G
Sbjct: 354 KPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNA-----LIDMYSKCGS 408
Query: 203 LRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSA 262
+ A +F+ E+ V++WT +I G A G EAL +F KM +PN +TF VL A
Sbjct: 409 IHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQA 468
Query: 263 CAHAGLVEEGRRYFKMIED-YGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVV 321
CAH+G +E+G YF +++ Y + P + HY+ +V L+G+ G+LEEA E+I+ M +P+
Sbjct: 469 CAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAG 528
Query: 322 VFGSFLSACKEHKQFEMAERVIEQVL----RMVKPEDDRGIYRLIHDLYVMGEKWEEAAK 377
++G+ L+ACK H+ ++AE+ E + +M P Y + ++Y W+ A+
Sbjct: 529 IWGALLNACKIHRNVKIAEQAAESLFNLEPQMAAP------YVEMANIYAAAGMWDGFAR 582
Query: 378 L 378
+
Sbjct: 583 I 583
Score = 101 bits (251), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 122/245 (49%), Gaps = 7/245 (2%)
Query: 87 NTMIVGYSRSGDVQRAREVFE--EAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFE 144
NT I Y + GD+ A+ VFE + R VS +SM AY+ G + L+ ++L E
Sbjct: 192 NTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYC-LMLRE 250
Query: 145 GIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLR 204
KPD T + + C + +L G+ +H + G + + E T ++MY+K
Sbjct: 251 EFKPDLSTFINLAASCQNPETL--TQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTC 308
Query: 205 NAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACA 264
+A ++F++M R +SWT +I G A+ G +EAL +F M +G +P+ +T ++S C
Sbjct: 309 SARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCG 368
Query: 265 HAGLVEEGRRYFKMIEDYGME-PKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVF 323
G +E G+ + YG + V +L+ + K G + EA +I E VV +
Sbjct: 369 KFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTP-EKTVVTW 427
Query: 324 GSFLS 328
+ ++
Sbjct: 428 TTMIA 432
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 136/302 (45%), Gaps = 39/302 (12%)
Query: 3 LYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLLNA 62
L+ ++ R G ++F F K+C + L + + +HAH+IK F + + V ++
Sbjct: 39 LFREMKRGGFEPNNFTFPFVAKAC-ARLADVGCCEMVHAHLIKSPFW-SDVFVGTATVDM 96
Query: 63 YVLLSFLD-ACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMI 121
+V + +D A +F+ MP R+ TWN M+ G+ +SG +A
Sbjct: 97 FVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKA------------------- 137
Query: 122 SAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKN 181
SLFR + L E I PD VT ++ + SL LL +++H ++
Sbjct: 138 ------------FSLFREMRLNE-ITPDSVTVMTLIQSASFEKSLKLL--EAMHAVGIRL 182
Query: 182 GWELNAELGATLVNMYAKGGVLRNAAMVFELMV--ERNVLSWTALICGAAQWGFCEEALV 239
G ++ + T ++ Y K G L +A +VFE + +R V+SW ++ + +G +A
Sbjct: 183 GVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFG 242
Query: 240 VFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVG 299
++ M +P+ TF + ++C + + +GR G + + + + +
Sbjct: 243 LYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYS 302
Query: 300 KS 301
KS
Sbjct: 303 KS 304
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 104/226 (46%), Gaps = 25/226 (11%)
Query: 119 SMISAYN-------NIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAG 171
S ++A+N N + L LFR + G +P+ T V CA + +G
Sbjct: 15 SSVNAWNLQIREAVNRNDPVESLLLFRE-MKRGGFEPNNFTFPFVAKACARLADVGCC-- 71
Query: 172 KSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQW 231
+ VH ++K+ + + +G V+M+ K + AA VFE M ER+ +W A++ G Q
Sbjct: 72 EMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQS 131
Query: 232 GFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIE-------DYGM 284
G ++A +F +MR+ + P+ +T ++ + + + K++E G+
Sbjct: 132 GHTDKAFSLFREMRLNEITPDSVTVMTLIQSASF-------EKSLKLLEAMHAVGIRLGV 184
Query: 285 EPKVHHYASLVYLVGKSGRLEEAYEIIKTM-KVEPNVVVFGSFLSA 329
+ +V + + GK G L+ A + + + + + VV + S A
Sbjct: 185 DVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKA 230
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
Query: 82 NTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVL 141
N + N +I YS+ G + AR++F+ P++ V+ ++MI+ Y G + L LF +++
Sbjct: 392 NVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMI 451
Query: 142 LFEGIKPDQVTAGAVLSGCAHMGSL 166
+ KP+ +T AVL CAH GSL
Sbjct: 452 DLD-YKPNHITFLAVLQACAHSGSL 475
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 174 bits (440), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 119/379 (31%), Positives = 193/379 (50%), Gaps = 37/379 (9%)
Query: 3 LYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLLNA 62
LY ++ G D F + L + TS L L + H +IK GF HV + L++
Sbjct: 227 LYKEMIFKGFKIDMFTLASVLNALTS-LDHLIGGRQFHGKLIKAGFHQNS-HVGSGLIDF 284
Query: 63 YVLLSFLDACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMIS 122
Y D ++D + +VF+E D V ++MIS
Sbjct: 285 YSKCGGCDG--MYD-------------------------SEKVFQEILSPDLVVWNTMIS 317
Query: 123 AYN-NIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKN 181
Y+ N S++ + FR++ G +PD + V S C+++ S K +HG +K+
Sbjct: 318 GYSMNEELSEEAVKSFRQMQRI-GHRPDDCSFVCVTSACSNLSSPSQC--KQIHGLAIKS 374
Query: 182 GWELNA-ELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVV 240
N + L+++Y K G L++A VF+ M E N +S+ +I G AQ G EAL++
Sbjct: 375 HIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLL 434
Query: 241 FEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFK-MIEDYGMEPKVHHYASLVYLVG 299
+++M +G+ PN++TF VLSACAH G V+EG+ YF M E + +EP+ HY+ ++ L+G
Sbjct: 435 YQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLG 494
Query: 300 KSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPEDDRGIY 359
++G+LEEA I M +P V + + L AC++HK +AER ++ MV Y
Sbjct: 495 RAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANEL--MVMQPLAATPY 552
Query: 360 RLIHDLYVMGEKWEEAAKL 378
++ ++Y KWEE A +
Sbjct: 553 VMLANMYADARKWEEMASV 571
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 155/326 (47%), Gaps = 15/326 (4%)
Query: 37 QHLHAHIIKLGFAPTHLHVANCLLNAYV---LLSFLDACILFDEMPNRNTVTWNTMIVGY 93
+ LHA +K + +++N +N Y LS+ A E PN ++N ++ Y
Sbjct: 28 KSLHALYVK-SIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPN--VFSYNVIVKAY 84
Query: 94 SRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTA 153
++ + AR++F+E PQ D+VS +++IS Y + + + LF+R+ G + D T
Sbjct: 85 AKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKL-GFEVDGFTL 143
Query: 154 GAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELM 213
+++ C L K +H F V G++ + + V Y+KGG+LR A VF M
Sbjct: 144 SGLIAACCDRVDL----IKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGM 199
Query: 214 VE-RNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEG 272
E R+ +SW ++I Q +AL ++++M G + + T VL+A + G
Sbjct: 200 DELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGG 259
Query: 273 RRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMK--VEPNVVVFGSFLSAC 330
R++ + G H + L+ K G + Y+ K + + P++VV+ + +S
Sbjct: 260 RQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGY 319
Query: 331 KEHKQF-EMAERVIEQVLRMVKPEDD 355
+++ E A + Q+ R+ DD
Sbjct: 320 SMNEELSEEAVKSFRQMQRIGHRPDD 345
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 173 bits (438), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 108/396 (27%), Positives = 205/396 (51%), Gaps = 49/396 (12%)
Query: 1 MHLYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLL 60
+ L++ +H+ G D F + K+C L ++ + +HA+ IK G+ L V++ +L
Sbjct: 502 LKLFALMHKQGERSDDFTLATVFKTC-GFLFAINQGKQVHAYAIKSGY-DLDLWVSSGIL 559
Query: 61 NAYVLLSFLDACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSM 120
+ YV + GD+ A+ F+ P D V+ ++M
Sbjct: 560 DMYV------------------------------KCGDMSAAQFAFDSIPVPDDVAWTTM 589
Query: 121 ISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVK 180
IS G ++ +F ++ L G+ PD+ T + + + +L G+ +H +K
Sbjct: 590 ISGCIENGEEERAFHVFSQMRLM-GVLPDEFTIATLAKASSCLTALE--QGRQIHANALK 646
Query: 181 NGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVV 240
+ +G +LV+MYAK G + +A +F+ + N+ +W A++ G AQ G +E L +
Sbjct: 647 LNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQL 706
Query: 241 FEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFK-MIEDYGMEPKVHHYASLVYLVG 299
F++M+ G++P+++TF GVLSAC+H+GLV E ++ + M DYG++P++ HY+ L +G
Sbjct: 707 FKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALG 766
Query: 300 KSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPEDDRGIY 359
++G +++A +I++M +E + ++ + L+AC+ E +RV ++L + +P D Y
Sbjct: 767 RAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLEL-EPLDSSA-Y 824
Query: 360 RLIHDLYVMGEKWEE-----------AAKLGPGFDF 384
L+ ++Y KW+E K PGF +
Sbjct: 825 VLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSW 860
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 85/353 (24%), Positives = 164/353 (46%), Gaps = 39/353 (11%)
Query: 3 LYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLLNA 62
L+ +L R G+ D + + LK+ +S L++ + +H H IK+ V+ L++A
Sbjct: 403 LFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSF-VSTALIDA 461
Query: 63 YVLLSFL-DACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMI 121
Y + +A ILF E N + V WN M+ GY++S D + ++F
Sbjct: 462 YSRNRCMKEAEILF-ERHNFDLVAWNAMMAGYTQSHDGHKTLKLF--------------- 505
Query: 122 SAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKN 181
+L + +G + D T V C + ++ GK VH + +K+
Sbjct: 506 -------------ALMHK----QGERSDDFTLATVFKTCGFLFAIN--QGKQVHAYAIKS 546
Query: 182 GWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVF 241
G++L+ + + +++MY K G + A F+ + + ++WT +I G + G E A VF
Sbjct: 547 GYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVF 606
Query: 242 EKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKS 301
+MR+ GV P+E T + A + +E+GR+ SLV + K
Sbjct: 607 SQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKC 666
Query: 302 GRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRM-VKPE 353
G +++AY + K +++ N+ + + L +H + + ++ +Q+ + +KP+
Sbjct: 667 GSIDDAYCLFKRIEM-MNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPD 718
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 101/189 (53%), Gaps = 10/189 (5%)
Query: 73 ILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNN-----I 127
+ F+E P R + N +I YS+ G + AR VF++ P RD VS +S+++AY +
Sbjct: 66 LTFEENPERFLI--NNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVV 123
Query: 128 GSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNA 187
+ +Q LFR +L + + ++T +L C H G + A +S HG+ K G + +
Sbjct: 124 ENIQQAFLLFR-ILRQDVVYTSRMTLSPMLKLCLHSGYV--WASESFHGYACKIGLDGDE 180
Query: 188 ELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVA 247
+ LVN+Y K G ++ ++FE M R+V+ W ++ + GF EEA+ + +
Sbjct: 181 FVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSS 240
Query: 248 GVRPNELTF 256
G+ PNE+T
Sbjct: 241 GLNPNEITL 249
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 120/267 (44%), Gaps = 43/267 (16%)
Query: 37 QHLHAHIIKLGFAPTHLHVANCLLNAYVLLSFL-DACILFDEMPNRNTVTWNTMIVGYSR 95
+ H + K+G VA L+N Y+ + + +LF+EMP R+ V WN M+ Y
Sbjct: 165 ESFHGYACKIGLDGDEF-VAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLE 223
Query: 96 --------------------------------SGDVQRAREVFEEAPQRDSVSLSSMI-- 121
SGD A +V A D+ S+S +I
Sbjct: 224 MGFKEEAIDLSSAFHSSGLNPNEITLRLLARISGDDSDAGQVKSFANGNDASSVSEIIFR 283
Query: 122 ----SAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGF 177
S Y + G L F ++ ++ DQVT +L+ + SL L G+ VH
Sbjct: 284 NKGLSEYLHSGQYSALLKCFAD-MVESDVECDQVTFILMLATAVKVDSLAL--GQQVHCM 340
Query: 178 IVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEA 237
+K G +L + +L+NMY K A VF+ M ER+++SW ++I G AQ G EA
Sbjct: 341 ALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEA 400
Query: 238 LVVFEKMRVAGVRPNELTFTGVLSACA 264
+ +F ++ G++P++ T T VL A +
Sbjct: 401 VCLFMQLLRCGLKPDQYTMTSVLKAAS 427
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 171 bits (434), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 99/304 (32%), Positives = 170/304 (55%), Gaps = 19/304 (6%)
Query: 84 VTWN---------TMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGL 134
V WN +++ Y+++G ++ ARE+FE P+RD VS +++I+ Y +G ++ L
Sbjct: 180 VKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEAL 239
Query: 135 SLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLA-GKSVHGFIVKNGWELNAELGATL 193
+F R L EG+ P+ VT ++L+ + L LL GK H +++ A L +L
Sbjct: 240 EMFHR-LHSEGMSPNYVTYASLLTA---LSGLALLDHGKQAHCHVLRRELPFYAVLQNSL 295
Query: 194 VNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAG-VRPN 252
++MY+K G L A +F+ M ER +SW A++ G ++ G E L +F MR V+P+
Sbjct: 296 IDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPD 355
Query: 253 ELTFTGVLSACAHAGLVEEGRRYFK--MIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEI 310
+T VLS C+H + + G F + +YG +P HY +V ++G++GR++EA+E
Sbjct: 356 AVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEF 415
Query: 311 IKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPEDDRGIYRLIHDLYVMGE 370
IK M +P V GS L AC+ H ++ E V +++ ++PE + G Y ++ +LY
Sbjct: 416 IKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIE-IEPE-NAGNYVILSNLYASAG 473
Query: 371 KWEE 374
+W +
Sbjct: 474 RWAD 477
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 91/321 (28%), Positives = 163/321 (50%), Gaps = 47/321 (14%)
Query: 37 QHLHAHIIKLGFAPTHLHVANCLLNAYVLLSFLDACILFDEMPNRNTVTWNTMIVGYSRS 96
Q +HAH+IK + P T +++ Y +
Sbjct: 72 QRVHAHMIKTRYLPA-------------------------------TYLRTRLLIFYGKC 100
Query: 97 GDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAV 156
++ AR+V +E P+++ VS ++MIS Y+ G S + L++F ++ +G KP++ T V
Sbjct: 101 DCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDG-KPNEFTFATV 159
Query: 157 LSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVER 216
L+ C LGL GK +HG IVK ++ + +G++L++MYAK G ++ A +FE + ER
Sbjct: 160 LTSCIRASGLGL--GKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPER 217
Query: 217 NVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYF 276
+V+S TA+I G AQ G EEAL +F ++ G+ PN +T+ +L+A + L++ G++
Sbjct: 218 DVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAH 277
Query: 277 KMIEDYGMEPKVHHYA----SLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKE 332
+ + ++ YA SL+ + K G L A + M E + + + L +
Sbjct: 278 CHV----LRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMP-ERTAISWNAMLVGYSK 332
Query: 333 HKQFEMAERVIEQVLRMVKPE 353
H + V+E + R+++ E
Sbjct: 333 HG---LGREVLE-LFRLMRDE 349
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 101/195 (51%), Gaps = 6/195 (3%)
Query: 155 AVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMV 214
A+L+ C + L G+ VH ++K + L L+ Y K L +A V + M
Sbjct: 57 ALLNAC--LDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMP 114
Query: 215 ERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRR 274
E+NV+SWTA+I +Q G EAL VF +M + +PNE TF VL++C A + G++
Sbjct: 115 EKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQ 174
Query: 275 YFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHK 334
+I + + + +SL+ + K+G+++EA EI + + E +VV + ++ +
Sbjct: 175 IHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLP-ERDVVSCTAIIAG---YA 230
Query: 335 QFEMAERVIEQVLRM 349
Q + E +E R+
Sbjct: 231 QLGLDEEALEMFHRL 245
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 76/137 (55%), Gaps = 12/137 (8%)
Query: 32 SLTIIQHLHAHIIKLGFAPTHLHVANCLLNAYVLLSFLD------ACILFDEMPNRNTVT 85
+L + LH+ G +P ++ A+ LL A L+ LD +L E+P V
Sbjct: 238 ALEMFHRLHSE----GMSPNYVTYAS-LLTALSGLALLDHGKQAHCHVLRRELPFY-AVL 291
Query: 86 WNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEG 145
N++I YS+ G++ AR +F+ P+R ++S ++M+ Y+ G ++ L LFR + +
Sbjct: 292 QNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKR 351
Query: 146 IKPDQVTAGAVLSGCAH 162
+KPD VT AVLSGC+H
Sbjct: 352 VKPDAVTLLAVLSGCSH 368
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 171 bits (433), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 114/379 (30%), Positives = 201/379 (53%), Gaps = 17/379 (4%)
Query: 7 LHRTGVPFD--SFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLLNAYV 64
+ G+ +D SF V + S L SL I + +HA ++K G + ++ V++ +++ Y
Sbjct: 251 MEENGLKWDEHSFGAVLNV---LSSLKSLKIGKEVHARVLKNG-SYSNKFVSSGIVDVYC 306
Query: 65 L---LSFLDACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMI 121
+ + ++ L N + + +MIVGYS G + A+ +F+ +++ V ++M
Sbjct: 307 KCGNMKYAESAHLLYGFGNLYSAS--SMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMF 364
Query: 122 SAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKN 181
Y N+ L L R + E PD + +VL C+ + GK +HG ++
Sbjct: 365 LGYLNLRQPDSVLELARAFIANETNTPDSLVMVSVLGACSLQAYME--PGKEIHGHSLRT 422
Query: 182 GWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVF 241
G ++ +L V+MY+K G + A +F+ ER+ + + A+I G A G ++ F
Sbjct: 423 GILMDKKLVTAFVDMYSKCGNVEYAERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQHF 482
Query: 242 EKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFK-MIEDYGMEPKVHHYASLVYLVGK 300
E M G +P+E+TF +LSAC H GLV EG +YFK MIE Y + P+ HY ++ L GK
Sbjct: 483 EDMTEGGFKPDEITFMALLSACRHRGLVLEGEKYFKSMIEAYNISPETGHYTCMIDLYGK 542
Query: 301 SGRLEEAYEIIKTM-KVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPEDDRGIY 359
+ RL++A E+++ + +VE + V+ G+FL+AC +K E+ + V E++L + R Y
Sbjct: 543 AYRLDKAIELMEGIDQVEKDAVILGAFLNACSWNKNTELVKEVEEKLLVIEGSNGSR--Y 600
Query: 360 RLIHDLYVMGEKWEEAAKL 378
I + Y +W+E ++
Sbjct: 601 IQIANAYASSGRWDEMQRI 619
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 121/261 (46%), Gaps = 42/261 (16%)
Query: 40 HAHIIKLGFAPTHLHVANCLLNAYVLLSFL-DACILFDEMPNRNTVTWNTMIVGYSRSGD 98
H IK G T + +N L+N Y L +A +FDEM RN +WN +I Y + +
Sbjct: 11 HIRSIKSGSTLTAVS-SNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAAYVKFNN 69
Query: 99 VQRAREVFE-EAPQRDSVSLSSMISAYNNI-GSSKQGLSLFRRVLLFE--GIKPDQVTAG 154
V+ ARE+FE + +RD ++ ++++S + G + + +F + E I D T
Sbjct: 70 VKEARELFESDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDFTVT 129
Query: 155 AVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGG------------- 201
++ A + + + G+ +HG +VK G + ++L++MY+K G
Sbjct: 130 TMVKLSAKLTN--VFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSC 187
Query: 202 ------VLRNAAM--------------VFELMVERN-VLSWTALICGAAQWGFCEEALVV 240
V RNA + VF E N +SW LI G AQ G+ EEAL +
Sbjct: 188 VEFVDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKM 247
Query: 241 FEKMRVAGVRPNELTFTGVLS 261
M G++ +E +F VL+
Sbjct: 248 AVSMEENGLKWDEHSFGAVLN 268
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 171 bits (433), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 107/364 (29%), Positives = 198/364 (54%), Gaps = 9/364 (2%)
Query: 15 DSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLLNAYVLL-SFLDACI 73
DS + + +C L L + +H H K G + VA+ LL+ Y S ++AC
Sbjct: 317 DSRTLAAVINACIG-LGFLETGKQMHCHACKFGLID-DIVVASTLLDMYSKCGSPMEACK 374
Query: 74 LFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQG 133
LF E+ + +T+ N+MI Y G + A+ VFE + +S +SM + ++ G + +
Sbjct: 375 LFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVET 434
Query: 134 LSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATL 193
L F ++ + + D+V+ +V+S CA + SL L G+ V G + + + ++L
Sbjct: 435 LEYFHQMHKLD-LPTDEVSLSSVISACASISSLEL--GEQVFARATIVGLDSDQVVSSSL 491
Query: 194 VNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNE 253
+++Y K G + + VF+ MV+ + + W ++I G A G EA+ +F+KM VAG+RP +
Sbjct: 492 IDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQ 551
Query: 254 LTFTGVLSACAHAGLVEEGRRYFKMIE-DYGMEPKVHHYASLVYLVGKSGRLEEAYEIIK 312
+TF VL+AC + GLVEEGR+ F+ ++ D+G P H++ +V L+ ++G +EEA +++
Sbjct: 552 ITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAINLVE 611
Query: 313 TMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPEDDRGIYRLIHDLYVMGEKW 372
M + + ++ S L C + M ++ E+++ + +PE+ Y + ++ W
Sbjct: 612 EMPFDVDGSMWSSILRGCVANGYKAMGKKAAEKIIEL-EPENSVA-YVQLSAIFATSGDW 669
Query: 373 EEAA 376
E +A
Sbjct: 670 ESSA 673
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 102/387 (26%), Positives = 177/387 (45%), Gaps = 72/387 (18%)
Query: 23 LKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLLNAYVLLSFLD-ACILFDEMPNR 81
L+SC+S + T+ + + ++K GF + + VAN LL Y + A LFDEMP+R
Sbjct: 33 LQSCSSR-NRETLWRQTNGLLLKKGFLSSIVIVANHLLQMYSRSGKMGIARNLFDEMPDR 91
Query: 82 NTVTWNTMIVGY-------------------------------SRSGDVQRAREVFEEAP 110
N +WNTMI GY +++G++ AR +F P
Sbjct: 92 NYFSWNTMIEGYMNSGEKGTSLRFFDMMPERDGYSWNVVVSGFAKAGELSVARRLFNAMP 151
Query: 111 QRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLA 170
++D V+L+S++ Y G +++ L LF+ + D +T VL CA + +L
Sbjct: 152 EKDVVTLNSLLHGYILNGYAEEALRLFKEL----NFSADAITLTTVLKACAELEALK--C 205
Query: 171 GKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQ 230
GK +H I+ G E ++++ ++LVN+YAK G LR A+ + E + E + S +ALI G A
Sbjct: 206 GKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALISGYAN 265
Query: 231 WGFCE-------------------------------EALVVFEKMRVAGVRPNELTFTGV 259
G EALV+F +MR R + T V
Sbjct: 266 CGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMR-NETREDSRTLAAV 324
Query: 260 LSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPN 319
++AC G +E G++ +G+ + ++L+ + K G EA ++ ++ +
Sbjct: 325 INACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVE-SYD 383
Query: 320 VVVFGSFLSACKEHKQFEMAERVIEQV 346
++ S + + + A+RV E++
Sbjct: 384 TILLNSMIKVYFSCGRIDDAKRVFERI 410
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 88/371 (23%), Positives = 162/371 (43%), Gaps = 40/371 (10%)
Query: 15 DSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLLNAYVLLSFLD-ACI 73
D+ + LK+C + L +L + +HA I+ +G + + L+N Y L A
Sbjct: 186 DAITLTTVLKAC-AELEALKCGKQIHAQIL-IGGVECDSKMNSSLVNVYAKCGDLRMASY 243
Query: 74 LFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQG 133
+ +++ + + + +I GY+ G V +R +F+ R + +SMIS Y +
Sbjct: 244 MLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEA 303
Query: 134 LSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATL 193
L LF + + D T AV++ C +G L GK +H K G + + +TL
Sbjct: 304 LVLFNE--MRNETREDSRTLAAVINACIGLGFLE--TGKQMHCHACKFGLIDDIVVASTL 359
Query: 194 VNMYAKGGV-------------------------------LRNAAMVFELMVERNVLSWT 222
++MY+K G + +A VFE + ++++SW
Sbjct: 360 LDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWN 419
Query: 223 ALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDY 282
++ G +Q G E L F +M + +E++ + V+SACA +E G + F
Sbjct: 420 SMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFARATIV 479
Query: 283 GMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQ-FEMAER 341
G++ +SL+ L K G +E + TM V+ + V + S +S + Q FE +
Sbjct: 480 GLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTM-VKSDEVPWNSMISGYATNGQGFEAIDL 538
Query: 342 VIEQVLRMVKP 352
+ + ++P
Sbjct: 539 FKKMSVAGIRP 549
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 81/177 (45%), Gaps = 9/177 (5%)
Query: 172 KSVHGFIVKNGWELNAELGAT-LVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQ 230
+ +G ++K G+ + + A L+ MY++ G + A +F+ M +RN SW +I G
Sbjct: 46 RQTNGLLLKKGFLSSIVIVANHLLQMYSRSGKMGIARNLFDEMPDRNYFSWNTMIEGYMN 105
Query: 231 WGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHH 290
G +L F+ M + ++ V+S A AG + RR F + E V
Sbjct: 106 SGEKGTSLRFFDMMP----ERDGYSWNVVVSGFAKAGELSVARRLFNAMP----EKDVVT 157
Query: 291 YASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVL 347
SL++ +G EEA + K + + + + L AC E + + +++ Q+L
Sbjct: 158 LNSLLHGYILNGYAEEALRLFKELNFSADAITLTTVLKACAELEALKCGKQIHAQIL 214
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 169 bits (429), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 116/380 (30%), Positives = 200/380 (52%), Gaps = 44/380 (11%)
Query: 1 MHLYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLL 60
M +Y ++H GV D F T S + L +++ + A IIK G + + + ++N L+
Sbjct: 374 MSVYKRMHIIGVKPDEF----TFGSLLATSLDLDVLEMVQACIIKFGLS-SKIEISNALI 428
Query: 61 NAYVLLSFLDACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSM 120
+A YS++G +++A +FE + +++ +S +++
Sbjct: 429 SA------------------------------YSKNGQIEKADLLFERSLRKNLISWNAI 458
Query: 121 ISAYNNIGSSKQGLSLFRRVLLFE-GIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIV 179
IS + + G +GL F +L E I PD T +LS C SL L G H +++
Sbjct: 459 ISGFYHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSICVSTSSLML--GSQTHAYVL 516
Query: 180 KNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALV 239
++G +G L+NMY++ G ++N+ VF M E++V+SW +LI ++ G E A+
Sbjct: 517 RHGQFKETLIGNALINMYSQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGEGENAVN 576
Query: 240 VFEKMRVAG-VRPNELTFTGVLSACAHAGLVEEGRRYFK-MIEDYGMEPKVHHYASLVYL 297
++ M+ G V P+ TF+ VLSAC+HAGLVEEG F M+E +G+ V H++ LV L
Sbjct: 577 TYKTMQDEGKVIPDAATFSAVLSACSHAGLVEEGLEIFNSMVEFHGVIRNVDHFSCLVDL 636
Query: 298 VGKSGRLEEAYEIIKTMK--VEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPEDD 355
+G++G L+EA ++K + + V V+ + SAC H ++ + V + L M K +DD
Sbjct: 637 LGRAGHLDEAESLVKISEKTIGSRVDVWWALFSACAAHGDLKLGKMVAK--LLMEKEKDD 694
Query: 356 RGIYRLIHDLYVMGEKWEEA 375
+Y + ++Y W+EA
Sbjct: 695 PSVYVQLSNIYAGAGMWKEA 714
Score = 118 bits (296), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 101/380 (26%), Positives = 184/380 (48%), Gaps = 45/380 (11%)
Query: 1 MHLYSKLHR-TGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCL 59
+ L++ +HR T + D + + + + HL +H + I+ G H HV+N L
Sbjct: 41 LKLFADVHRCTTLRPDQYSVSLAITT-ARHLRDTIFGGQVHCYAIRSGLL-CHSHVSNTL 98
Query: 60 LNAYVLLSFLDACIL-FDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSL- 117
L+ Y L L + FDE+ + +W T++ + GD++ A EVF++ P+RD V++
Sbjct: 99 LSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDIEYAFEVFDKMPERDDVAIW 158
Query: 118 SSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGF 177
++MI+ G + + LFR + G++ D+ +LS C + GSL GK VH
Sbjct: 159 NAMITGCKESGYHETSVELFREMHKL-GVRHDKFGFATILSMCDY-GSLDF--GKQVHSL 214
Query: 178 IVKNGWELNAELGATLVNMYAKGGVLRNAAMVFEL--MVERNVLSWTALICGAAQWGFC- 234
++K G+ + + + L+ MY V+ +A +VFE + R+ +++ +I G A GF
Sbjct: 215 VIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQVTFNVVIDGLA--GFKR 272
Query: 235 EEALVVFEKMRVAGVRPNELTFTGVLSACAHAGL--------VEEGRRYFKMI------- 279
+E+L+VF KM A +RP +LTF V+ +C+ A + ++ G + ++
Sbjct: 273 DESLLVFRKMLEASLRPTDLTFVSVMGSCSCAAMGHQVHGLAIKTGYEKYTLVSNATMTM 332
Query: 280 ----EDYGMEPKVHH---------YASLVYLVGKSGRLEEAYEIIKTMK---VEPNVVVF 323
ED+G KV + +++ ++ + A + K M V+P+ F
Sbjct: 333 YSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTF 392
Query: 324 GSFLSACKEHKQFEMAERVI 343
GS L+ + EM + I
Sbjct: 393 GSLLATSLDLDVLEMVQACI 412
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 131/261 (50%), Gaps = 9/261 (3%)
Query: 81 RNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRV 140
+ T+ N + YS D A +VFE ++D V+ ++MIS+YN K +S+++R+
Sbjct: 321 KYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRM 380
Query: 141 LLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKG 200
+ G+KPD+ T G++L+ SL L + V I+K G E+ L++ Y+K
Sbjct: 381 HII-GVKPDEFTFGSLLAT-----SLDLDVLEMVQACIIKFGLSSKIEISNALISAYSKN 434
Query: 201 GVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVR--PNELTFTG 258
G + A ++FE + +N++SW A+I G GF E L F + + VR P+ T +
Sbjct: 435 GQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVRILPDAYTLST 494
Query: 259 VLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEP 318
+LS C + G + + +G + +L+ + + G ++ + E+ M E
Sbjct: 495 LLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQMS-EK 553
Query: 319 NVVVFGSFLSACKEHKQFEMA 339
+VV + S +SA H + E A
Sbjct: 554 DVVSWNSLISAYSRHGEGENA 574
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 78/335 (23%), Positives = 156/335 (46%), Gaps = 56/335 (16%)
Query: 1 MHLYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLL 60
+ L+ ++H+ GV D F L C SL + +H+ +IK GF +A+ ++
Sbjct: 175 VELFREMHKLGVRHDKFGFATILSMC--DYGSLDFGKQVHSLVIKAGF-----FIASSVV 227
Query: 61 NAYVLLSF-----LDACILFDE--MPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRD 113
NA + + F +DAC++F+E + R+ VT+N +I G + +RD
Sbjct: 228 NALITMYFNCQVVVDACLVFEETDVAVRDQVTFNVVIDGLA--------------GFKRD 273
Query: 114 SVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKS 173
+ L +FR+ +L ++P +T +V+ C+ G
Sbjct: 274 ------------------ESLLVFRK-MLEASLRPTDLTFVSVMGSCSCAA-----MGHQ 309
Query: 174 VHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGF 233
VHG +K G+E + + MY+ A VFE + E+++++W +I Q
Sbjct: 310 VHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKL 369
Query: 234 CEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYAS 293
+ A+ V+++M + GV+P+E TF +L+ ++E + I +G+ K+ +
Sbjct: 370 GKSAMSVYKRMHIIGVKPDEFTFGSLLATSLDLDVLEMVQ---ACIIKFGLSSKIEISNA 426
Query: 294 LVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLS 328
L+ K+G++E+A +++ + N++ + + +S
Sbjct: 427 LISAYSKNGQIEKA-DLLFERSLRKNLISWNAIIS 460
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 114/263 (43%), Gaps = 34/263 (12%)
Query: 47 GFAPTHLHVANCLL--------NAYVLLSFLDACILFDEM--------------PNRNTV 84
GF L +CLL +AY L + L C+ + + T+
Sbjct: 466 GFPFEGLERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETL 525
Query: 85 TWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFE 144
N +I YS+ G +Q + EVF + ++D VS +S+ISAY+ G + ++ ++ +
Sbjct: 526 IGNALINMYSQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEG 585
Query: 145 GIKPDQVTAGAVLSGCAHMGSL--GLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGV 202
+ PD T AVLS C+H G + GL S+ F +G N + + LV++ + G
Sbjct: 586 KVIPDAATFSAVLSACSHAGLVEEGLEIFNSMVEF---HGVIRNVDHFSCLVDLLGRAGH 642
Query: 203 LRNA---AMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGV 259
L A + E + V W AL A G + +V K+ + + + + +
Sbjct: 643 LDEAESLVKISEKTIGSRVDVWWALFSACAAHGDLKLGKMV-AKLLMEKEKDDPSVYVQL 701
Query: 260 LSACAHAGL---VEEGRRYFKMI 279
+ A AG+ EE RR MI
Sbjct: 702 SNIYAGAGMWKEAEETRRAINMI 724
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 87/183 (47%), Gaps = 5/183 (2%)
Query: 115 VSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSV 174
++L+ ++ G ++ L LF V ++PDQ + ++ H+ + G V
Sbjct: 22 LNLNRRLTGLTRSGENRNALKLFADVHRCTTLRPDQYSVSLAITTARHLRDT--IFGGQV 79
Query: 175 HGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFC 234
H + +++G ++ + TL+++Y + G L + F+ + E +V SWT L+ + + G
Sbjct: 80 HCYAIRSGLLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDI 139
Query: 235 EEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASL 294
E A VF+KM R + + +++ C +G E F+ + G+ +A++
Sbjct: 140 EYAFEVFDKM---PERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATI 196
Query: 295 VYL 297
+ +
Sbjct: 197 LSM 199
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 169 bits (429), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 104/298 (34%), Positives = 169/298 (56%), Gaps = 10/298 (3%)
Query: 82 NTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVL 141
+ V N +I Y +S ++ A +FE +RD + +S++ ++ G L+LF R +
Sbjct: 296 DIVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFER-M 354
Query: 142 LFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGW----ELNAELGATLVNMY 197
L GI+PD VT VL C + SL G+ +HG+++ +G N + +L++MY
Sbjct: 355 LCSGIRPDIVTLTTVLPTCGRLASL--RQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMY 412
Query: 198 AKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFT 257
K G LR+A MVF+ M ++ SW +I G E AL +F M AGV+P+E+TF
Sbjct: 413 VKCGDLRDARMVFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFV 472
Query: 258 GVLSACAHAGLVEEGRRYFKMIED-YGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKV 316
G+L AC+H+G + EGR + +E Y + P HYA ++ ++G++ +LEEAYE+ + +
Sbjct: 473 GLLQACSHSGFLNEGRNFLAQMETVYNILPTSDHYACVIDMLGRADKLEEAYELAISKPI 532
Query: 317 EPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPEDDRGIYRLIHDLYVMGEKWEE 374
N VV+ S LS+C+ H ++A V + L ++PE G Y L+ ++YV K+EE
Sbjct: 533 CDNPVVWRSILSSCRLHGNKDLA-LVAGKRLHELEPEHCGG-YVLMSNVYVEAGKYEE 588
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 158/341 (46%), Gaps = 45/341 (13%)
Query: 1 MHLYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLL 60
M Y ++ G+ D + LK S L+ ++ +H KLGF ++C +
Sbjct: 146 METYREMRANGILPDKYTFPSLLKG--SDAMELSDVKKVHGLAFKLGFD------SDCYV 197
Query: 61 NAYVLLSFLDACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRD-SVSLSS 119
+ ++ YS+ V+ A++VF+E P RD SV ++
Sbjct: 198 GS-------------------------GLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNA 232
Query: 120 MISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIV 179
+++ Y+ I + L +F + + EG+ + T +VLS G + G+S+HG V
Sbjct: 233 LVNGYSQIFRFEDALLVFSK-MREEGVGVSRHTITSVLSAFTVSGDID--NGRSIHGLAV 289
Query: 180 KNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALV 239
K G + + L++MY K L A +FE M ER++ +W +++C G + L
Sbjct: 290 KTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLA 349
Query: 240 VFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRR-YFKMIEDYGMEPKVHH---YASLV 295
+FE+M +G+RP+ +T T VL C + +GR + MI + K + + SL+
Sbjct: 350 LFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLM 409
Query: 296 YLVGKSGRLEEAYEIIKTMKVEP----NVVVFGSFLSACKE 332
+ K G L +A + +M+V+ N+++ G + +C E
Sbjct: 410 DMYVKCGDLRDARMVFDSMRVKDSASWNIMINGYGVQSCGE 450
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 99/196 (50%), Gaps = 5/196 (2%)
Query: 152 TAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGW-ELNAELGATLVNMYAKGGVLRNAAMVF 210
T A L CA ++G+ +HGF+V+ G+ + + G +LVNMYAK G++R A +VF
Sbjct: 62 TCIATLQRCAQRKDY--VSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVF 119
Query: 211 ELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVE 270
ER+V + ALI G G +A+ + +MR G+ P++ TF +L + A +
Sbjct: 120 G-GSERDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKG-SDAMELS 177
Query: 271 EGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSAC 330
+ ++ + G + + + LV K +E+A ++ + + V++ + ++
Sbjct: 178 DVKKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGY 237
Query: 331 KEHKQFEMAERVIEQV 346
+ +FE A V ++
Sbjct: 238 SQIFRFEDALLVFSKM 253
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 169 bits (429), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 102/325 (31%), Positives = 178/325 (54%), Gaps = 7/325 (2%)
Query: 53 LHVANCLLNAYVLLSFLD-ACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQ 111
L + N ++ Y LD A LFDEM +++VT+ +I GY G V+ A +F E
Sbjct: 269 LSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMES 328
Query: 112 RDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAG 171
+ ++MIS ++ ++ FR ++ G +P+ VT ++L + S L G
Sbjct: 329 IGLSTWNAMISGLMQNNHHEEVINSFREMIRC-GSRPNTVTLSSLLPSLTY--SSNLKGG 385
Query: 172 KSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQW 231
K +H F ++NG + N + ++++ YAK G L A VF+ +R++++WTA+I A
Sbjct: 386 KEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVH 445
Query: 232 GFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFK-MIEDYGMEPKVHH 290
G + A +F++M+ G +P+++T T VLSA AH+G + + F M+ Y +EP V H
Sbjct: 446 GDSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEH 505
Query: 291 YASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMV 350
YA +V ++ ++G+L +A E I M ++P V+G+ L+ E+A +++ M
Sbjct: 506 YACMVSVLSRAGKLSDAMEFISKMPIDPIAKVWGALLNGASVLGDLEIARFACDRLFEM- 564
Query: 351 KPEDDRGIYRLIHDLYVMGEKWEEA 375
+PE + G Y ++ +LY +WEEA
Sbjct: 565 EPE-NTGNYTIMANLYTQAGRWEEA 588
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 140/300 (46%), Gaps = 35/300 (11%)
Query: 87 NTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGI 146
N MI Y++ +++ AR+VF+E +RD VS +SMIS Y+ GS + +++ +L
Sbjct: 171 NGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDF 230
Query: 147 KPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNA 206
KP+ VT +V C S L+ G VH +++N +++ L ++ YAK G L A
Sbjct: 231 KPNGVTVISVFQACGQ--SSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYA 288
Query: 207 AMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGV----------------- 249
+F+ M E++ +++ A+I G G +EA+ +F +M G+
Sbjct: 289 RALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHE 348
Query: 250 --------------RPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLV 295
RPN +T + +L + ++ ++ G+ G + ++ S++
Sbjct: 349 EVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSII 408
Query: 296 YLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRM-VKPED 354
K G L A + K + +++ + + ++A H + A + +Q+ + KP+D
Sbjct: 409 DNYAKLGFLLGAQRVFDNCK-DRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDD 467
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 152/313 (48%), Gaps = 38/313 (12%)
Query: 27 TSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLLNAYVLLS-FLDACILFDEMPNRNTVT 85
T H L ++Q LHA I+ P + +A+ L++ Y F A +FDE+ RN +
Sbjct: 33 TRHRLPLHVLQ-LHARIVVFSIKPDNF-LASKLISFYTRQDRFRQALHVFDEITVRNAFS 90
Query: 86 WNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEG 145
+N +++ Y+ +RE++ +A S +S IGSS +
Sbjct: 91 YNALLIAYT-------SREMYFDA-------FSLFLSW---IGSS---------CYSSDA 124
Query: 146 IKPDQVTAGAVL---SGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGV 202
+PD ++ VL SGC LG LA + VHGF+++ G++ + +G ++ Y K
Sbjct: 125 ARPDSISISCVLKALSGCDDFW-LGSLA-RQVHGFVIRGGFDSDVFVGNGMITYYTKCDN 182
Query: 203 LRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKM-RVAGVRPNELTFTGVLS 261
+ +A VF+ M ER+V+SW ++I G +Q G E+ +++ M + +PN +T V
Sbjct: 183 IESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQ 242
Query: 262 ACAHAGLVEEGRR-YFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNV 320
AC + + G + KMIE++ ++ + +++ K G L+ A + M E +
Sbjct: 243 ACGQSSDLIFGLEVHKKMIENH-IQMDLSLCNAVIGFYAKCGSLDYARALFDEMS-EKDS 300
Query: 321 VVFGSFLSACKEH 333
V +G+ +S H
Sbjct: 301 VTYGAIISGYMAH 313
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 169 bits (429), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 92/297 (30%), Positives = 174/297 (58%), Gaps = 10/297 (3%)
Query: 82 NTVTWNTMIVGYSRSGDVQRAREVFE----EAPQRDSVSLSSMISAYNNIGSSKQGLSLF 137
+ +TWN +I G+S + ++ E+ E + + D VS +S+IS + +++ F
Sbjct: 217 DVITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAF 276
Query: 138 RRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMY 197
++ +L G+ P+ T +L C + + GK +HG+ V G E + + + L++MY
Sbjct: 277 KQ-MLTHGLYPNSATIITLLPACTTLAYMK--HGKEIHGYSVVTGLEDHGFVRSALLDMY 333
Query: 198 AKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFT 257
K G + A ++F ++ +++ ++I A G ++A+ +F++M G + + LTFT
Sbjct: 334 GKCGFISEAMILFRKTPKKTTVTFNSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFT 393
Query: 258 GVLSACAHAGLVEEGRRYFKMIED-YGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKV 316
+L+AC+HAGL + G+ F ++++ Y + P++ HYA +V L+G++G+L EAYE+IK M++
Sbjct: 394 AILTACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYACMVDLLGRAGKLVEAYEMIKAMRM 453
Query: 317 EPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPEDDRGIYRLIHDLYVMGEKWE 373
EP++ V+G+ L+AC+ H E+A R+ + L ++PE+ G L+ LY WE
Sbjct: 454 EPDLFVWGALLAACRNHGNMELA-RIAAKHLAELEPENS-GNGLLLTSLYANAGSWE 508
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 128/245 (52%), Gaps = 6/245 (2%)
Query: 89 MIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKP 148
++ Y G V AR+VF+E P+RD MI A G ++ L FR + +G+K
Sbjct: 57 LVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGACARNGYYQESLDFFRE-MYKDGLKL 115
Query: 149 DQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAM 208
D ++L ++ L GK +H ++K +E +A + ++L++MY+K G + NA
Sbjct: 116 DAFIVPSLLKASRNL--LDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARK 173
Query: 209 VFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGL 268
VF + E++++ + A+I G A +EAL + + M++ G++P+ +T+ ++S +H
Sbjct: 174 VFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRN 233
Query: 269 VEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTM---KVEPNVVVFGS 325
E+ +++ G +P V + S++ + + + E+A++ K M + PN +
Sbjct: 234 EEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIIT 293
Query: 326 FLSAC 330
L AC
Sbjct: 294 LLPAC 298
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 169 bits (428), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 100/352 (28%), Positives = 185/352 (52%), Gaps = 37/352 (10%)
Query: 28 SHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLLNAYVLLSFLDACILFDEMPNRNTVTWN 87
S+L L + +H+ +++ GF NA V +AC
Sbjct: 248 SNLRDLNLALQVHSRMVRFGF------------NAEV-----EAC--------------G 276
Query: 88 TMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIK 147
+I Y + G V A+ VF++ ++ ++++ AY S ++ L+LF ++ E +
Sbjct: 277 ALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKE-VP 335
Query: 148 PDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAA 207
P++ T +L+ A + L G +HG ++K+G+ + +G LVNMYAK G + +A
Sbjct: 336 PNEYTFAILLNSIAELSLLK--QGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDAR 393
Query: 208 MVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAG 267
F M R++++W +I G + G EAL F++M G PN +TF GVL AC+H G
Sbjct: 394 KAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQACSHIG 453
Query: 268 LVEEGRRYF-KMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSF 326
VE+G YF ++++ + ++P + HY +V L+ K+G ++A + ++T +E +VV + +
Sbjct: 454 FVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRTL 513
Query: 327 LSACKEHKQFEMAERVIEQVLRMVKPEDDRGIYRLIHDLYVMGEKWEEAAKL 378
L+AC + + + ++V E + K +D G+Y L+ +++ +WE AK+
Sbjct: 514 LNACYVRRNYRLGKKVAEYAIE--KYPNDSGVYVLLSNIHAKSREWEGVAKV 563
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 113/253 (44%), Gaps = 3/253 (1%)
Query: 87 NTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGI 146
N++I Y + + RAR++F+ P+R+ VS +M+ Y N G + L LF+ +
Sbjct: 73 NSLINLYVKCRETVRARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGES 132
Query: 147 KPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNA 206
+P++ A V C++ G + GK HG +K G + + TLV MY+ A
Sbjct: 133 RPNEFVATVVFKSCSNSGRIE--EGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEA 190
Query: 207 AMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHA 266
V + + ++ +++ + G + G +E L V K N LT+ L ++
Sbjct: 191 IRVLDDLPYCDLSVFSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNL 250
Query: 267 GLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSF 326
+ + + +G +V +L+ + GK G++ A + + N+ + +
Sbjct: 251 RDLNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQ-NIFLNTTI 309
Query: 327 LSACKEHKQFEMA 339
+ A + K FE A
Sbjct: 310 MDAYFQDKSFEEA 322
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 169 bits (428), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 97/293 (33%), Positives = 173/293 (59%), Gaps = 7/293 (2%)
Query: 88 TMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIK 147
++I Y + G+ A VF + + + S + MIS+Y ++G+ + + ++ +++ G+K
Sbjct: 349 SLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSV-GVK 407
Query: 148 PDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAA 207
PD VT +VL C+ + +L GK +H I ++ E + L + L++MY+K G + A
Sbjct: 408 PDVVTFTSVLPACSQLAALE--KGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAF 465
Query: 208 MVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAG 267
+F + +++V+SWT +I G EAL F++M+ G++P+ +T VLSAC HAG
Sbjct: 466 RIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAG 525
Query: 268 LVEEGRRYF-KMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEII-KTMKVEPNVVVFGS 325
L++EG ++F +M YG+EP + HY+ ++ ++G++GRL EAYEII +T + N + +
Sbjct: 526 LIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAELLST 585
Query: 326 FLSACKEHKQFEMAERVIEQVLRMVKPEDDRGIYRLIHDLYVMGEKWEEAAKL 378
SAC H + + +R I ++L P DD Y ++ +LY GE W+ A ++
Sbjct: 586 LFSACCLHLEHSLGDR-IARLLVENYP-DDASTYMVLFNLYASGESWDAARRV 636
Score = 114 bits (286), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 85/335 (25%), Positives = 159/335 (47%), Gaps = 36/335 (10%)
Query: 1 MHLYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLL 60
+ L+ ++ +G +S + + +C S L L + +H +K GF L
Sbjct: 193 LELFGRMESSGFEPNSVSLTVAISAC-SRLLWLERGKEIHRKCVKKGFE----------L 241
Query: 61 NAYVLLSFLDACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSM 120
+ YV + +D Y + ++ AREVF++ P++ V+ +SM
Sbjct: 242 DEYVNSALVDM---------------------YGKCDCLEVAREVFQKMPRKSLVAWNSM 280
Query: 121 ISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVK 180
I Y G SK + + R+++ EG +P Q T ++L C+ S LL GK +HG++++
Sbjct: 281 IKGYVAKGDSKSCVEILNRMII-EGTRPSQTTLTSILMACSR--SRNLLHGKFIHGYVIR 337
Query: 181 NGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVV 240
+ + + +L+++Y K G A VF + SW +I G +A+ V
Sbjct: 338 SVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEV 397
Query: 241 FEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGK 300
+++M GV+P+ +TFT VL AC+ +E+G++ I + +E ++L+ + K
Sbjct: 398 YDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSK 457
Query: 301 SGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQ 335
G +EA+ I ++ + +VV + +SA H Q
Sbjct: 458 CGNEKEAFRIFNSIP-KKDVVSWTVMISAYGSHGQ 491
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 132/293 (45%), Gaps = 34/293 (11%)
Query: 23 LKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLLNAYVLLSFLDACILFDEMPNRN 82
L+ CT+ SL I+ +H I+ LG R+
Sbjct: 10 LRECTNSTKSLRRIKLVHQRILTLGL-------------------------------RRD 38
Query: 83 TVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSL-SSMISAYNNIGSSKQGLSLFRRVL 141
V ++I Y D AR VFE R V + +S++S Y+ L +F+R+L
Sbjct: 39 VVLCKSLINVYFTCKDHCSARHVFENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLL 98
Query: 142 LFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGG 201
PD T V+ +G L G+ +H +VK+G+ + + ++LV MYAK
Sbjct: 99 NCSICVPDSFTFPNVIKAYGALGREFL--GRMIHTLVVKSGYVCDVVVASSLVGMYAKFN 156
Query: 202 VLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLS 261
+ N+ VF+ M ER+V SW +I Q G E+AL +F +M +G PN ++ T +S
Sbjct: 157 LFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAIS 216
Query: 262 ACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTM 314
AC+ +E G+ + G E + ++LV + GK LE A E+ + M
Sbjct: 217 ACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKM 269
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 168 bits (425), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 94/291 (32%), Positives = 162/291 (55%), Gaps = 6/291 (2%)
Query: 87 NTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGI 146
N +I Y++ G+V + ++F D+V+ +++ISA G GL + ++ E +
Sbjct: 447 NALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSE-V 505
Query: 147 KPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNA 206
PD T L CA + + L GK +H +++ G+E ++G L+ MY+K G L N+
Sbjct: 506 VPDMATFLVTLPMCASLAAKRL--GKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENS 563
Query: 207 AMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHA 266
+ VFE M R+V++WT +I +G E+AL F M +G+ P+ + F ++ AC+H+
Sbjct: 564 SRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHS 623
Query: 267 GLVEEGRRYF-KMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGS 325
GLV+EG F KM Y ++P + HYA +V L+ +S ++ +A E I+ M ++P+ ++ S
Sbjct: 624 GLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWAS 683
Query: 326 FLSACKEHKQFEMAERVIEQVLRMVKPEDDRGIYRLIHDLYVMGEKWEEAA 376
L AC+ E AERV +++ + P DD G L + Y KW++ +
Sbjct: 684 VLRACRTSGDMETAERVSRRIIEL-NP-DDPGYSILASNAYAALRKWDKVS 732
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 89/356 (25%), Positives = 161/356 (45%), Gaps = 41/356 (11%)
Query: 1 MHLYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLL 60
+ Y KL + V D + +K+C L + ++ I+ +GF + L V N L+
Sbjct: 91 LEFYGKLRESKVSPDKYTFPSVIKACAG-LFDAEMGDLVYEQILDMGFE-SDLFVGNALV 148
Query: 61 NAYVLLSFLDACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSM 120
+ Y SR G + RAR+VF+E P RD VS +S+
Sbjct: 149 DMY------------------------------SRMGLLTRARQVFDEMPVRDLVSWNSL 178
Query: 121 ISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVK 180
IS Y++ G ++ L ++ L I PD T +VL ++ L + G+ +HGF +K
Sbjct: 179 ISGYSSHGYYEEALEIYHE-LKNSWIVPDSFTVSSVLPAFGNL--LVVKQGQGLHGFALK 235
Query: 181 NGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVV 240
+G + LV MY K +A VF+ M R+ +S+ +ICG + EE++ +
Sbjct: 236 SGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRM 295
Query: 241 FEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYG--MEPKVHHYASLVYLV 298
F + + +P+ LT + VL AC H + + + + G +E V + L+ +
Sbjct: 296 FLE-NLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNI--LIDVY 352
Query: 299 GKSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPED 354
K G + A ++ +M+ + + V + S +S + A ++ + ++ M + D
Sbjct: 353 AKCGDMITARDVFNSMECK-DTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQAD 407
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 128/260 (49%), Gaps = 8/260 (3%)
Query: 89 MIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKP 148
M + + R D AR VF+E RDSVS ++MI Y + ++ + +F L + KP
Sbjct: 251 MYLKFRRPTD---ARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENL--DQFKP 305
Query: 149 DQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAM 208
D +T +VL C H+ L L K ++ +++K G+ L + + L+++YAK G + A
Sbjct: 306 DLLTVSSVLRACGHLRDLSL--AKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARD 363
Query: 209 VFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGL 268
VF M ++ +SW ++I G Q G EA+ +F+ M + + + +T+ ++S
Sbjct: 364 VFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLAD 423
Query: 269 VEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLS 328
++ G+ G+ + +L+ + K G + ++ +I +M + V + + +S
Sbjct: 424 LKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGT-GDTVTWNTVIS 482
Query: 329 ACKEHKQFEMAERVIEQVLR 348
AC F +V Q+ +
Sbjct: 483 ACVRFGDFATGLQVTTQMRK 502
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/300 (23%), Positives = 134/300 (44%), Gaps = 35/300 (11%)
Query: 15 DSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLLNAYVLLSFLDACIL 74
D + L++C HL L++ ++++ +++K GF
Sbjct: 306 DLLTVSSVLRAC-GHLRDLSLAKYIYNYMLKAGFV------------------------- 339
Query: 75 FDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGL 134
+ N +I Y++ GD+ AR+VF +D+VS +S+IS Y G + +
Sbjct: 340 ------LESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAM 393
Query: 135 SLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLV 194
LF+ +++ E + D +T ++S + L GK +H +K+G ++ + L+
Sbjct: 394 KLFKMMMIMEE-QADHITYLMLISVSTRLADLKF--GKGLHSNGIKSGICIDLSVSNALI 450
Query: 195 NMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNEL 254
+MYAK G + ++ +F M + ++W +I ++G L V +MR + V P+
Sbjct: 451 DMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMA 510
Query: 255 TFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTM 314
TF L CA G+ + +G E ++ +L+ + K G LE + + + M
Sbjct: 511 TFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERM 570
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/346 (23%), Positives = 152/346 (43%), Gaps = 44/346 (12%)
Query: 9 RTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLLNAYVLLSF 68
R PF S + S +S+L+ L + +HA +I LG + +
Sbjct: 4 RVSSPFISRAL-----SSSSNLNEL---RRIHALVISLGLDSSDFFSGKLIDKYSHFREP 55
Query: 69 LDACILFDEM-PNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNI 127
+ +F + P +N WN++I +S++G +F EA + Y +
Sbjct: 56 ASSLSVFRRVSPAKNVYLWNSIIRAFSKNG-------LFPEA-----------LEFYGKL 97
Query: 128 GSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNA 187
SK + PD+ T +V+ CA G G V+ I+ G+E +
Sbjct: 98 RESK--------------VSPDKYTFPSVIKACA--GLFDAEMGDLVYEQILDMGFESDL 141
Query: 188 ELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVA 247
+G LV+MY++ G+L A VF+ M R+++SW +LI G + G+ EEAL ++ +++ +
Sbjct: 142 FVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNS 201
Query: 248 GVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEA 307
+ P+ T + VL A + +V++G+ G+ V LV + K R +A
Sbjct: 202 WIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDA 261
Query: 308 YEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPE 353
+ M V + V + + + + + E + R+ + L KP+
Sbjct: 262 RRVFDEMDVR-DSVSYNTMICGYLKLEMVEESVRMFLENLDQFKPD 306
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 75/153 (49%), Gaps = 7/153 (4%)
Query: 1 MHLYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLL 60
+ + +++ ++ V D + TL C S L + + + +H +++ G+ + L + N L+
Sbjct: 494 LQVTTQMRKSEVVPDMATFLVTLPMCAS-LAAKRLGKEIHCCLLRFGYE-SELQIGNALI 551
Query: 61 NAYVLLSFLD-ACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQR----DSV 115
Y L+ + +F+ M R+ VTW MI Y G+ ++A E F + + DSV
Sbjct: 552 EMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSV 611
Query: 116 SLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKP 148
++I A ++ G +GL+ F ++ I P
Sbjct: 612 VFIAIIYACSHSGLVDEGLACFEKMKTHYKIDP 644
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 167 bits (424), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 123/444 (27%), Positives = 213/444 (47%), Gaps = 83/444 (18%)
Query: 1 MHLYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQ--HLHAHIIKLGFAPTHLHVANC 58
++L +K+HR G+ ++ + LK+C +L+ I + +H + KLG + V
Sbjct: 234 LNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGM-EFDIVVRTA 292
Query: 59 LLNAYVLL-SFLDACILFDEMPNRNTVTWNTMIVGYSRSGDV--QRAREVF--------- 106
LL+ Y S +A LF MP++N VT+N MI G+ + ++ + + E F
Sbjct: 293 LLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRR 352
Query: 107 --EEAPQRDSVSL-------------------------------SSMISAYNNIGSSKQG 133
E +P SV L S++I Y +GS++ G
Sbjct: 353 GLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDG 412
Query: 134 LSLFR------------------------------RVLLFEGIKPDQVTAGAVLSGCAHM 163
+ F R L I+P++ T ++S CA
Sbjct: 413 MQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADF 472
Query: 164 GSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTA 223
+L +G+ + G+ +K+G + + + ++MYAK G + A VF + +V +++A
Sbjct: 473 AALS--SGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVATYSA 530
Query: 224 LICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFK-MIEDY 282
+I AQ G EAL +FE M+ G++PN+ F GVL AC H GLV +G +YF+ M DY
Sbjct: 531 MISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACCHGGLVTQGLKYFQCMKNDY 590
Query: 283 GMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERV 342
+ P H+ LV L+G++GRL +A +I + + + V + + LS+C+ +K + +RV
Sbjct: 591 RINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDHPVTWRALLSSCRVYKDSVIGKRV 650
Query: 343 IEQVLRMVKPEDDRGIYRLIHDLY 366
E+++ + +PE G Y L+H++Y
Sbjct: 651 AERLMEL-EPEAS-GSYVLLHNIY 672
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 139/275 (50%), Gaps = 9/275 (3%)
Query: 87 NTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGI 146
N +I YS+ G + +A +F+ +RD VS +S+IS Y +G++++ L+L + + +G+
Sbjct: 187 NVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNLLAK-MHRDGL 245
Query: 147 KPDQVTAGAVLSGCAHMGSLGLL-AGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRN 205
G+VL C + G + G ++H + K G E + + L++MYAK G L+
Sbjct: 246 NLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKE 305
Query: 206 AAMVFELMVERNVLSWTALICGAAQWG-----FCEEALVVFEKMRVAGVRPNELTFTGVL 260
A +F LM +NV+++ A+I G Q EA +F M+ G+ P+ TF+ VL
Sbjct: 306 AIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVL 365
Query: 261 SACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNV 320
AC+ A +E GR+ +I + ++L+ L G E+ + + + ++
Sbjct: 366 KACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFASTS-KQDI 424
Query: 321 VVFGSFLSACKEHKQFEMAERVIEQVLRM-VKPED 354
+ S + +++Q E A + Q+ ++PE+
Sbjct: 425 ASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEE 459
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 116/239 (48%), Gaps = 7/239 (2%)
Query: 93 YSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVT 152
Y + ++ AR++F+ P+R+ +S +S+IS Y +G +Q + LF +K D+ T
Sbjct: 92 YCKCRELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEARE-ANLKLDKFT 150
Query: 153 AGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFEL 212
L C L L G+ +HG +V NG L L++MY+K G L A +F+
Sbjct: 151 YAGALGFCGERCDLDL--GELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDR 208
Query: 213 MVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACA---HAGLV 269
ER+ +SW +LI G + G EE L + KM G+ VL AC + G +
Sbjct: 209 CDERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFI 268
Query: 270 EEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLS 328
E+G GME + +L+ + K+G L+EA ++ M NVV + + +S
Sbjct: 269 EKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMP-SKNVVTYNAMIS 326
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 85/168 (50%), Gaps = 3/168 (1%)
Query: 161 AHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLS 220
A GS+ L GK HG ++K+ L L+NMY K L A +F+ M ERN++S
Sbjct: 58 AKSGSVVL--GKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERNIIS 115
Query: 221 WTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIE 280
+ +LI G Q GF E+A+ +F + R A ++ ++ T+ G L C ++ G ++
Sbjct: 116 FNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGELLHGLVV 175
Query: 281 DYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLS 328
G+ +V L+ + K G+L++A + E + V + S +S
Sbjct: 176 VNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCD-ERDQVSWNSLIS 222
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 167 bits (423), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 91/291 (31%), Positives = 164/291 (56%), Gaps = 6/291 (2%)
Query: 89 MIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKP 148
+I Y G ++ A +F+ +++ +S +S+I+AY G + L LF+ L + P
Sbjct: 371 LIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQE-LWDSSLVP 429
Query: 149 DQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAM 208
D T ++L A+ SL L G+ +H +IVK+ + N + +LV+MYA G L +A
Sbjct: 430 DSTTIASILP--AYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARK 487
Query: 209 VFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGL 268
F ++ ++V+SW ++I A GF ++ +F +M + V PN+ TF +L+AC+ +G+
Sbjct: 488 CFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGM 547
Query: 269 VEEGRRYFK-MIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFL 327
V+EG YF+ M +YG++P + HY ++ L+G++G A ++ M P ++GS L
Sbjct: 548 VDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLL 607
Query: 328 SACKEHKQFEMAERVIEQVLRMVKPEDDRGIYRLIHDLYVMGEKWEEAAKL 378
+A + HK +AE EQ+ +M D+ G Y L+ ++Y +WE+ ++
Sbjct: 608 NASRNHKDITIAEFAAEQIFKM--EHDNTGCYVLLLNMYAEAGRWEDVNRI 656
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 97/331 (29%), Positives = 166/331 (50%), Gaps = 42/331 (12%)
Query: 1 MHLYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLL 60
+ YS++ GV D+F F +KS + + SL + +HA +IKLGF + ++V N L+
Sbjct: 115 VQFYSRMVFAGVKADTFTYPFVIKS-VAGISSLEEGKKIHAMVIKLGFV-SDVYVCNSLI 172
Query: 61 NAYVLLSFLDACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSM 120
+ Y+ L W+ A +VFEE P+RD VS +SM
Sbjct: 173 SLYMKLG----------------CAWD--------------AEKVFEEMPERDIVSWNSM 202
Query: 121 ISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVK 180
IS Y +G L LF+ +L G KPD+ + + L C+H+ S + GK +H V+
Sbjct: 203 ISGYLALGDGFSSLMLFKEMLKC-GFKPDRFSTMSALGACSHVYSPKM--GKEIHCHAVR 259
Query: 181 NGWEL-NAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALV 239
+ E + + ++++MY+K G + A +F M++RN+++W +I A+ G +A +
Sbjct: 260 SRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFL 319
Query: 240 VFEKM-RVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLV 298
F+KM G++P+ +T +L A A + EGR G P + +L+ +
Sbjct: 320 CFQKMSEQNGLQPDVITSINLLPASA----ILEGRTIHGYAMRRGFLPHMVLETALIDMY 375
Query: 299 GKSGRLEEAYEIIKTMKVEPNVVVFGSFLSA 329
G+ G+L+ A E+I E NV+ + S ++A
Sbjct: 376 GECGQLKSA-EVIFDRMAEKNVISWNSIIAA 405
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 155/333 (46%), Gaps = 38/333 (11%)
Query: 1 MHLYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLL 60
+ L+ ++ + G D F + L +C SH++S + + +H H ++ + + + +
Sbjct: 216 LMLFKEMLKCGFKPDRFSTMSALGAC-SHVYSPKMGKEIHCHAVR-----SRIETGDVM- 268
Query: 61 NAYVLLSFLDACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSM 120
V+ S LD YS+ G+V A +F QR+ V+ + M
Sbjct: 269 ---VMTSILDM---------------------YSKYGEVSYAERIFNGMIQRNIVAWNVM 304
Query: 121 ISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVK 180
I Y G F+++ G++PD +T+ +L A +L G+++HG+ ++
Sbjct: 305 IGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASA------ILEGRTIHGYAMR 358
Query: 181 NGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVV 240
G+ + L L++MY + G L++A ++F+ M E+NV+SW ++I Q G AL +
Sbjct: 359 RGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALEL 418
Query: 241 FEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGK 300
F+++ + + P+ T +L A A + + EGR I SLV++
Sbjct: 419 FQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAM 478
Query: 301 SGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEH 333
G LE+A + + ++ +VV + S + A H
Sbjct: 479 CGDLEDARKCFNHILLK-DVVSWNSIIMAYAVH 510
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 94/174 (54%), Gaps = 3/174 (1%)
Query: 92 GYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQV 151
G++ S ++ A ++F+E + D+ + MI + + G + + + R ++F G+K D
Sbjct: 73 GFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSR-MVFAGVKADTF 131
Query: 152 TAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFE 211
T V+ A + SL GK +H ++K G+ + + +L+++Y K G +A VFE
Sbjct: 132 TYPFVIKSVAGISSLE--EGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFE 189
Query: 212 LMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAH 265
M ER+++SW ++I G G +L++F++M G +P+ + L AC+H
Sbjct: 190 EMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSH 243
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 167 bits (423), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 93/293 (31%), Positives = 165/293 (56%), Gaps = 7/293 (2%)
Query: 88 TMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIK 147
++I Y+ + +R+VF+E ++++S Y+ + LS+F +L I
Sbjct: 265 SLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSG-MLRNSIL 323
Query: 148 PDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAA 207
P+Q T + L+ C+ +G+L GK +HG VK G E +A +G +LV MY+ G + +A
Sbjct: 324 PNQSTFASGLNSCSALGTLDW--GKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAV 381
Query: 208 MVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAG 267
VF + +++++SW ++I G AQ G + A V+F +M P+E+TFTG+LSAC+H G
Sbjct: 382 SVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCG 441
Query: 268 LVEEGRRYFKMIED--YGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGS 325
+E+GR+ F + ++ K+ HY +V ++G+ G+L+EA E+I+ M V+PN +V+ +
Sbjct: 442 FLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILGRCGKLKEAEELIERMVVKPNEMVWLA 501
Query: 326 FLSACKEHKQFEMAERVIEQVLRMVKPEDDRGIYRLIHDLYVMGEKWEEAAKL 378
LSAC+ H + E+ + + Y L+ ++Y +W +KL
Sbjct: 502 LLSACRMHSDVDRGEKAAAAIFNL--DSKSSAAYVLLSNIYASAGRWSNVSKL 552
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 128/281 (45%), Gaps = 43/281 (15%)
Query: 68 FLDACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNI 127
+DA LFDEMP R+ V+WN+MI G GD+ A ++F+E P+R VS ++M++
Sbjct: 82 LVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEMPERSVVSWTAMVNGCFRS 141
Query: 128 GSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNA 187
G Q LF ++ P + TA W
Sbjct: 142 GKVDQAERLFYQM-------PVKDTAA----------------------------WN--- 163
Query: 188 ELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVA 247
++V+ Y + G + +A +F+ M +NV+SWT +ICG Q EAL +F+ M
Sbjct: 164 ----SMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRC 219
Query: 248 GVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEA 307
++ FT V++ACA+A G + +I G + + ASL+ R+ ++
Sbjct: 220 CIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDS 279
Query: 308 YEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLR 348
++ KV V V+ + LS +K+ E A + +LR
Sbjct: 280 RKVFDE-KVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLR 319
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 166 bits (421), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 114/373 (30%), Positives = 192/373 (51%), Gaps = 49/373 (13%)
Query: 8 HRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLLNAYVLLS 67
H + F +F L +C+ LH L + LH +++ GF T + V N L++ Y
Sbjct: 206 HPNSITFCAF-----LNACSDWLH-LNLGMQLHGLVLRSGF-DTDVSVCNGLIDFYGKCK 258
Query: 68 FLDAC-ILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSS-MISAYN 125
+ + I+F EM +N V+W +++ Y ++ + ++A ++ + ++D V S MIS+
Sbjct: 259 QIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRS-RKDIVETSDFMISS-- 315
Query: 126 NIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWEL 185
VLS CA M L L G+S+H VK E
Sbjct: 316 ------------------------------VLSACAGMAGLEL--GRSIHAHAVKACVER 343
Query: 186 NAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKM- 244
+G+ LV+MY K G + ++ F+ M E+N+++ +LI G A G + AL +FE+M
Sbjct: 344 TIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMA 403
Query: 245 -RVAGVRPNELTFTGVLSACAHAGLVEEGRRYFK-MIEDYGMEPKVHHYASLVYLVGKSG 302
R G PN +TF +LSAC+ AG VE G + F M YG+EP HY+ +V ++G++G
Sbjct: 404 PRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAG 463
Query: 303 RLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPEDDRGIYRLI 362
+E AYE IK M ++P + V+G+ +AC+ H + ++ E + ++ P+D G + L+
Sbjct: 464 MVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKL-DPKDS-GNHVLL 521
Query: 363 HDLYVMGEKWEEA 375
+ + +W EA
Sbjct: 522 SNTFAAAGRWAEA 534
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 125/277 (45%), Gaps = 35/277 (12%)
Query: 70 DACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGS 129
DA LFDE+P RN TWN I G + A E F E
Sbjct: 161 DARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIE--------------------- 199
Query: 130 SKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAEL 189
FRR+ +G P+ +T A L+ C+ L L G +HG ++++G++ + +
Sbjct: 200 -------FRRI---DG-HPNSITFCAFLNACSDWLHLNL--GMQLHGLVLRSGFDTDVSV 246
Query: 190 GATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGV 249
L++ Y K +R++ ++F M +N +SW +L+ Q E+A V++ + R V
Sbjct: 247 CNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIV 306
Query: 250 RPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYE 309
++ + VLSACA +E GR +E + ++LV + GK G +E++ +
Sbjct: 307 ETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQ 366
Query: 310 IIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQV 346
M E N+V S + Q +MA + E++
Sbjct: 367 AFDEMP-EKNLVTRNSLIGGYAHQGQVDMALALFEEM 402
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 116/257 (45%), Gaps = 12/257 (4%)
Query: 87 NTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLF---RRVLLF 143
N +I YS+ + AR V P R+ VS +S+IS G L F RR
Sbjct: 46 NYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRR---- 101
Query: 144 EGIKPDQVTAGAVLSGCAHMGSLGL-LAGKSVHGFIVKNGWELNAELGATLVNMYAKGGV 202
EG+ P+ T A SL L + GK +H VK G L+ +G + +MY K +
Sbjct: 102 EGVVPNDFTFPCAFKAVA---SLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRL 158
Query: 203 LRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSA 262
+A +F+ + ERN+ +W A I + G EA+ F + R PN +TF L+A
Sbjct: 159 RDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNA 218
Query: 263 CAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVV 322
C+ + G + ++ G + V L+ GK ++ + EII T N V
Sbjct: 219 CSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSS-EIIFTEMGTKNAVS 277
Query: 323 FGSFLSACKEHKQFEMA 339
+ S ++A ++ + E A
Sbjct: 278 WCSLVAAYVQNHEDEKA 294
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 95/220 (43%), Gaps = 49/220 (22%)
Query: 171 GKSVHGFIVKNGWELNAE----LGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALIC 226
G+ VH IVK L++ L L+NMY+K +A +V L RNV+SWT+LI
Sbjct: 25 GRVVHARIVKT---LDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLIS 81
Query: 227 GAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACA-----------HA--------- 266
G AQ G ALV F +MR GV PN+ TF A A HA
Sbjct: 82 GLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRIL 141
Query: 267 ---------------GLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYE-I 310
L ++ R+ F I + +E + + + GR EA E
Sbjct: 142 DVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLET----WNAFISNSVTDGRPREAIEAF 197
Query: 311 IKTMKVE--PNVVVFGSFLSACKEHKQFEMAERVIEQVLR 348
I+ +++ PN + F +FL+AC + + ++ VLR
Sbjct: 198 IEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLR 237
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 76/153 (49%), Gaps = 9/153 (5%)
Query: 3 LYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLLNA 62
LY + + V F I L +C + L + + +HAH +K T + V + L++
Sbjct: 297 LYLRSRKDIVETSDFMISSVLSACAG-MAGLELGRSIHAHAVKACVERT-IFVGSALVDM 354
Query: 63 YVLLSFL-DACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEE------APQRDSV 115
Y + D+ FDEMP +N VT N++I GY+ G V A +FEE P + +
Sbjct: 355 YGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYM 414
Query: 116 SLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKP 148
+ S++SA + G+ + G+ +F + GI+P
Sbjct: 415 TFVSLLSACSRAGAVENGMKIFDSMRSTYGIEP 447
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 166 bits (420), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 104/315 (33%), Positives = 171/315 (54%), Gaps = 14/315 (4%)
Query: 81 RNTVTWNTMIVGYSRSGDVQRAREVFEE--APQRDSVSLSSMISAYNNIGSSKQGLSLFR 138
RN V ++++ Y + DV+ AR VF+ R+ VS +SMI+AY + + LFR
Sbjct: 164 RNIVVSSSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFR 223
Query: 139 RV-LLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMY 197
+ +Q +V+S C+ +G L GK HG + + G+E N + +L++MY
Sbjct: 224 SFNAALTSDRANQFMLASVISACSSLGRLQW--GKVAHGLVTRGGYESNTVVATSLLDMY 281
Query: 198 AKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFT 257
AK G L A +F + +V+S+T++I A+ G E A+ +F++M + PN +T
Sbjct: 282 AKCGSLSCAEKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLL 341
Query: 258 GVLSACAHAGLVEEGRRYFK-MIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKV 316
GVL AC+H+GLV EG Y M E YG+ P HY +V ++G+ GR++EAYE+ KT++V
Sbjct: 342 GVLHACSHSGLVNEGLEYLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEV 401
Query: 317 --EPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPEDD-RGIYRLIHDLYVMGEKWE 373
E +++G+ LSA + H + E+ V E R+++ Y + + Y + WE
Sbjct: 402 GAEQGALLWGALLSAGRLHGRVEI---VSEASKRLIQSNQQVTSAYIALSNAYAVSGGWE 458
Query: 374 EAAKLGPGFDFNRSG 388
++ L + RSG
Sbjct: 459 DSESL--RLEMKRSG 471
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 141/270 (52%), Gaps = 7/270 (2%)
Query: 82 NTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVL 141
+T T N +++ Y + ++ AR++F+E + + VS +S+IS YN++G + LS+F+++
Sbjct: 63 DTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGKPQNALSMFQKMH 122
Query: 142 LFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGG 201
+ P++ T +V C+ + + GK++H + +G N + ++LV+MY K
Sbjct: 123 EDRPVPPNEYTFASVFKACSALAESRI--GKNIHARLEISGLRRNIVVSSSLVDMYGKCN 180
Query: 202 VLRNAAMVFELMV--ERNVLSWTALICGAAQWGFCEEALVVFEKMRVA--GVRPNELTFT 257
+ A VF+ M+ RNV+SWT++I AQ EA+ +F A R N+
Sbjct: 181 DVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALTSDRANQFMLA 240
Query: 258 GVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVE 317
V+SAC+ G ++ G+ ++ G E SL+ + K G L A +I ++
Sbjct: 241 SVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCH 300
Query: 318 PNVVVFGSFLSACKEHKQFEMAERVIEQVL 347
+V+ + S + A +H E A ++ ++++
Sbjct: 301 -SVISYTSMIMAKAKHGLGEAAVKLFDEMV 329
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 166 bits (419), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 96/289 (33%), Positives = 166/289 (57%), Gaps = 11/289 (3%)
Query: 93 YSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVT 152
Y++S + ARE FE R+ VS ++MI + G ++ + LF ++LL E ++PD++T
Sbjct: 286 YAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLL-ENLQPDELT 344
Query: 153 AGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFEL 212
+VLS CA ++ + K V + K G + +L++ Y++ G L A + F
Sbjct: 345 FASVLSSCAKFSAIWEI--KQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHS 402
Query: 213 MVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEG 272
+ E +++SWT++I A GF EE+L +FE M + ++P+++TF VLSAC+H GLV+EG
Sbjct: 403 IREPDLVSWTSVIGALASHGFAEESLQMFESM-LQKLQPDKITFLEVLSACSHGGLVQEG 461
Query: 273 RRYFK-MIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSACK 331
R FK M E Y +E + HY L+ L+G++G ++EA +++ +M EP+ +F C
Sbjct: 462 LRCFKRMTEFYKIEAEDEHYTCLIDLLGRAGFIDEASDVLNSMPTEPSTHALAAFTGGCN 521
Query: 332 EHKQFEMAERVIEQVLRM--VKPEDDRGIYRLIHDLYVMGEKWEEAAKL 378
H++ E + +++L + KP + Y ++ + YV W +AA L
Sbjct: 522 IHEKRESMKWGAKKLLEIEPTKPVN----YSILSNAYVSEGHWNQAALL 566
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 143/283 (50%), Gaps = 8/283 (2%)
Query: 72 CILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSK 131
C++ + + +++ Y + G + AR VFE RD V ++++S+Y G
Sbjct: 166 CLMVKQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMID 225
Query: 132 QGLSLFRRVLLFEG-IKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELG 190
+ L + + + + D T ++LS C + GK +H + K ++ + +
Sbjct: 226 EAFGLLKLMGSDKNRFRGDYFTFSSLLSACR------IEQGKQIHAILFKVSYQFDIPVA 279
Query: 191 ATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVR 250
L+NMYAK L +A FE MV RNV+SW A+I G AQ G EA+ +F +M + ++
Sbjct: 280 TALLNMYAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQ 339
Query: 251 PNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEI 310
P+ELTF VLS+CA + E ++ M+ G + SL+ ++G L EA
Sbjct: 340 PDELTFASVLSSCAKFSAIWEIKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLC 399
Query: 311 IKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPE 353
+++ EP++V + S + A H E + ++ E +L+ ++P+
Sbjct: 400 FHSIR-EPDLVSWTSVIGALASHGFAEESLQMFESMLQKLQPD 441
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 152/333 (45%), Gaps = 41/333 (12%)
Query: 27 TSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLLNAYV-LLSFLDACILFDEMPNRNTVT 85
++ L L+ ++ H ++K G + L + N LL AY + F DA LFDEMP RN VT
Sbjct: 46 SASLDHLSDVKQEHGFMVKQGIYNS-LFLQNKLLQAYTKIREFDDADKLFDEMPLRNIVT 104
Query: 86 WNTMIVG-YSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFE 144
WN +I G R GD + G R+L F
Sbjct: 105 WNILIHGVIQRDGDTNHRAHL---------------------------GFCYLSRIL-FT 136
Query: 145 GIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLR 204
+ D V+ ++ C S + AG +H +VK G E + +LV+ Y K G++
Sbjct: 137 DVSLDHVSFMGLIRLCT--DSTNMKAGIQLHCLMVKQGLESSCFPSTSLVHFYGKCGLIV 194
Query: 205 NAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKM--RVAGVRPNELTFTGVLSA 262
A VFE +++R+++ W AL+ G +EA + + M R + TF+ +LSA
Sbjct: 195 EARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLKLMGSDKNRFRGDYFTFSSLLSA 254
Query: 263 CAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVV 322
C +E+G++ ++ + + +L+ + KS L +A E ++M V NVV
Sbjct: 255 CR----IEQGKQIHAILFKVSYQFDIPVATALLNMYAKSNHLSDARECFESMVVR-NVVS 309
Query: 323 FGSFLSACKEHKQFEMAERVIEQ-VLRMVKPED 354
+ + + ++ + A R+ Q +L ++P++
Sbjct: 310 WNAMIVGFAQNGEGREAMRLFGQMLLENLQPDE 342
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 165 bits (418), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 92/286 (32%), Positives = 158/286 (55%), Gaps = 6/286 (2%)
Query: 93 YSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVT 152
YS+ G ++ A +FE + D VS++ ++ GS ++ + F R +L G++ D
Sbjct: 301 YSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIR-MLQAGVEIDANV 359
Query: 153 AGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFEL 212
AVL SLGL GK +H ++K + N + L+NMY+K G L ++ VF
Sbjct: 360 VSAVLGVSFIDNSLGL--GKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRR 417
Query: 213 MVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEG 272
M +RN +SW ++I A+ G AL ++E+M V+P ++TF +L AC+H GL+++G
Sbjct: 418 MPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKG 477
Query: 273 RRYF-KMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSACK 331
R +M E +G+EP+ HY ++ ++G++G L+EA I ++ ++P+ ++ + L AC
Sbjct: 478 RELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQALLGACS 537
Query: 332 EHKQFEMAERVIEQVLRMVKPEDDRGIYRLIHDLYVMGEKWEEAAK 377
H E+ E EQ+ + D + LI ++Y KW+E AK
Sbjct: 538 FHGDTEVGEYAAEQLFQTAP--DSSSAHILIANIYSSRGKWKERAK 581
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 150/307 (48%), Gaps = 19/307 (6%)
Query: 76 DEMPNRNT-VTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGL 134
D +RN V WN+++ Y++ G + A ++F+E P RD +S + + + ++ G
Sbjct: 82 DADIHRNALVVWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGF 141
Query: 135 SLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLV 194
L +R+L G D T VLS C L K +H + +G++ +G L+
Sbjct: 142 VLLKRMLGSGGF--DHATLTIVLSVCD--TPEFCLVTKMIHALAILSGYDKEISVGNKLI 197
Query: 195 NMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNEL 254
Y K G + VF+ M RNV++ TA+I G + E+ L +F MR V PN +
Sbjct: 198 TSYFKCGCSVSGRGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSV 257
Query: 255 TFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTM 314
T+ L+AC+ + + EG++ ++ YG+E ++ ++L+ + K G +E+A+ I ++
Sbjct: 258 TYLSALAACSGSQRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFEST 317
Query: 315 ----KVEPNVVVFGSFLSACKEHK-QF---------EMAERVIEQVLRMVKPEDDRGIYR 360
+V V++ G + +E QF E+ V+ VL + ++ G+ +
Sbjct: 318 TEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGK 377
Query: 361 LIHDLYV 367
+H L +
Sbjct: 378 QLHSLVI 384
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 75/150 (50%), Gaps = 13/150 (8%)
Query: 82 NTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVL 141
NT N +I YS+ GD+ ++ VF P+R+ VS +SMI+A+ G L L+ +
Sbjct: 391 NTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMT 450
Query: 142 LFEGIKPDQVTAGAVLSGCAHMGSLG-----LLAGKSVHGFIVKNGWELNAELGATLVNM 196
E +KP VT ++L C+H+G + L K VHG E E +++M
Sbjct: 451 TLE-VKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGI------EPRTEHYTCIIDM 503
Query: 197 YAKGGVLRNA-AMVFELMVERNVLSWTALI 225
+ G+L+ A + + L ++ + W AL+
Sbjct: 504 LGRAGLLKEAKSFIDSLPLKPDCKIWQALL 533
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 165 bits (418), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 93/262 (35%), Positives = 146/262 (55%), Gaps = 4/262 (1%)
Query: 89 MIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKP 148
+++ Y+ SGD+Q A +F RD + ++MIS Y G ++GL ++ + I P
Sbjct: 149 LLILYALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYD-MRQNRIVP 207
Query: 149 DQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAM 208
DQ T +V C+ + L GK H ++K + N + + LV+MY K +
Sbjct: 208 DQYTFASVFRACSALDRLE--HGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHR 265
Query: 209 VFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGL 268
VF+ + RNV++WT+LI G G E L FEKM+ G RPN +TF VL+AC H GL
Sbjct: 266 VFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGL 325
Query: 269 VEEG-RRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFL 327
V++G ++ M DYG+EP+ HYA++V +G++GRL+EAYE + + + V+GS L
Sbjct: 326 VDKGWEHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLL 385
Query: 328 SACKEHKQFEMAERVIEQVLRM 349
AC+ H ++ E + L +
Sbjct: 386 GACRIHGNVKLLELAATKFLEL 407
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 105/259 (40%), Gaps = 40/259 (15%)
Query: 106 FEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGS 165
F+ QR + L + G K+ + L L G++ + T +L C
Sbjct: 68 FQVENQRKTEKLDKTLKGLCVTGRLKEAVGL----LWSSGLQVEPETYAVLLQECKQRKE 123
Query: 166 LGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALI 225
GK +H + G+ LN L L+ +YA G L+ A ++F + R+++ W A+I
Sbjct: 124 Y--TKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTAGILFRSLKIRDLIPWNAMI 181
Query: 226 CGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRR----------- 274
G Q G +E L ++ MR + P++ TF V AC+ +E G+R
Sbjct: 182 SGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIK 241
Query: 275 ------------YFK--------MIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTM 314
YFK + D V + SL+ G G++ E + + M
Sbjct: 242 SNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKM 301
Query: 315 KVE---PNVVVFGSFLSAC 330
K E PN V F L+AC
Sbjct: 302 KEEGCRPNPVTFLVVLTAC 320
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 116/260 (44%), Gaps = 15/260 (5%)
Query: 1 MHLYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLL 60
+ +Y + + + D + ++C++ L L + HA +IK +++ V + L+
Sbjct: 194 LFIYYDMRQNRIVPDQYTFASVFRACSA-LDRLEHGKRAHAVMIKRCIK-SNIIVDSALV 251
Query: 61 NAYVLLS-FLDACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVF----EEAPQRDSV 115
+ Y S F D +FD++ RN +TW ++I GY G V + F EE + + V
Sbjct: 252 DMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPV 311
Query: 116 SLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVH 175
+ +++A N+ G +G F + GI+P+ A++ G L + +
Sbjct: 312 TFLVVLTACNHGGLVDKGWEHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRL-----QEAY 366
Query: 176 GFIVKNGWELNAELGATLV---NMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWG 232
F++K+ + + + +L+ ++ +L AA F + N ++ G A G
Sbjct: 367 EFVMKSPCKEHPPVWGSLLGACRIHGNVKLLELAATKFLELDPTNGGNYVVFANGYASCG 426
Query: 233 FCEEALVVFEKMRVAGVRPN 252
E A V KM AGV+ +
Sbjct: 427 LREAASKVRRKMENAGVKKD 446
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 165 bits (418), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 99/292 (33%), Positives = 167/292 (57%), Gaps = 6/292 (2%)
Query: 87 NTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGI 146
N++I YS+SG V A VF + R V+ +SM+ ++ G+S + +SLF + +
Sbjct: 443 NSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFD-YMYHSYL 501
Query: 147 KPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNA 206
+ ++VT AV+ C+ +GSL GK VH ++ +G + + L++MYAK G L A
Sbjct: 502 EMNEVTFLAVIQACSSIGSLE--KGKWVHHKLIISGLK-DLFTDTALIDMYAKCGDLNAA 558
Query: 207 AMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHA 266
VF M R+++SW+++I G A+ F +M +G +PNE+ F VLSAC H+
Sbjct: 559 ETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHS 618
Query: 267 GLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSF 326
G VEEG+ YF +++ +G+ P H+A + L+ +SG L+EAY IK M + V+GS
Sbjct: 619 GSVEEGKYYFNLMKSFGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSL 678
Query: 327 LSACKEHKQFEMAERVIEQVLRMVKPEDDRGIYRLIHDLYVMGEKWEEAAKL 378
++ C+ H++ ++ + + + +V DD G Y L+ ++Y +WEE +L
Sbjct: 679 VNGCRIHQKMDIIKAIKNDLSDIVT--DDTGYYTLLSNIYAEEGEWEEFRRL 728
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/355 (25%), Positives = 171/355 (48%), Gaps = 37/355 (10%)
Query: 1 MHLYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLL 60
+ LY +L F L++C L++ +H IIK G
Sbjct: 85 IDLYHRLVSETTQISKFVFPSVLRACAGSREHLSVGGKVHGRIIKGGV------------ 132
Query: 61 NAYVLLSFLDACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSM 120
+ + V +++ Y ++G++ A +VF+ P RD V+ S++
Sbjct: 133 -------------------DDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTL 173
Query: 121 ISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVK 180
+S+ G + L +F+ ++ +G++PD VT +V+ GCA +G L + +SVHG I +
Sbjct: 174 VSSCLENGEVVKALRMFK-CMVDDGVEPDAVTMISVVEGCAELGCLRI--ARSVHGQITR 230
Query: 181 NGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVV 240
++L+ L +L+ MY+K G L ++ +FE + ++N +SWTA+I + F E+AL
Sbjct: 231 KMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRS 290
Query: 241 FEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYA-SLVYLVG 299
F +M +G+ PN +T VLS+C GL+ EG+ ++P + +LV L
Sbjct: 291 FSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYA 350
Query: 300 KSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQ-VLRMVKPE 353
+ G+L + +++ + + N+V + S +S A + Q V + +KP+
Sbjct: 351 ECGKLSDCETVLRVVS-DRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPD 404
Score = 121 bits (303), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 83/256 (32%), Positives = 140/256 (54%), Gaps = 14/256 (5%)
Query: 77 EMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSL 136
+M + + N+++ YS+ GD+ + +FE+ ++++VS ++MIS+YN S++ L
Sbjct: 231 KMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRS 290
Query: 137 FRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLL-AGKSVHGFIVKNGWELNAE-LGATLV 194
F ++ GI+P+ VT +VLS C G +GL+ GKSVHGF V+ + N E L LV
Sbjct: 291 FSE-MIKSGIEPNLVTLYSVLSSC---GLIGLIREGKSVHGFAVRRELDPNYESLSLALV 346
Query: 195 NMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNEL 254
+YA+ G L + V ++ +RN+++W +LI A G +AL +F +M ++P+
Sbjct: 347 ELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAF 406
Query: 255 TFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHH---YASLVYLVGKSGRLEEAYEII 311
T +SAC +AGLV G K I + + V SL+ + KSG ++ A +
Sbjct: 407 TLASSISACENAGLVPLG----KQIHGHVIRTDVSDEFVQNSLIDMYSKSGSVDSASTVF 462
Query: 312 KTMKVEPNVVVFGSFL 327
+K +VV + S L
Sbjct: 463 NQIK-HRSVVTWNSML 477
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 131/288 (45%), Gaps = 8/288 (2%)
Query: 65 LLSFLDACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAY 124
L+S L A +L R+ + +I Y+ G +R VFE P DS +I
Sbjct: 16 LVSQLHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAFPYPDSFMYGVLIKCN 75
Query: 125 NNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLA-GKSVHGFIVKNGW 183
+ L+ R L+ E + + +VL CA GS L+ G VHG I+K G
Sbjct: 76 VWCHLLDAAIDLYHR-LVSETTQISKFVFPSVLRACA--GSREHLSVGGKVHGRIIKGGV 132
Query: 184 ELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEK 243
+ +A + +L+ MY + G L +A VF+ M R++++W+ L+ + G +AL +F+
Sbjct: 133 DDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKC 192
Query: 244 MRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGR 303
M GV P+ +T V+ CA G + R I + SL+ + K G
Sbjct: 193 MVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGD 252
Query: 304 LEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVK 351
L + I + + + N V + + +S+ + + E +E+ + M+K
Sbjct: 253 LLSSERIFEKI-AKKNAVSWTAMISS---YNRGEFSEKALRSFSEMIK 296
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 98/223 (43%), Gaps = 22/223 (9%)
Query: 81 RNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRV 140
++ T +I Y++ GD+ A VF R VS SSMI+AY G +S F +
Sbjct: 537 KDLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQ- 595
Query: 141 LLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKG 200
++ G KP++V VLS C H GS+ GK + G N+E A +++ ++
Sbjct: 596 MVESGTKPNEVVFMNVLSACGHSGSVE--EGKYYFNLMKSFGVSPNSEHFACFIDLLSRS 653
Query: 201 GVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELT----- 255
G L+ A + M + A+ WG + +KM + N+L+
Sbjct: 654 GDLKEAYRTIKEM---------PFLADASVWGSLVNGCRIHQKMDIIKAIKNDLSDIVTD 704
Query: 256 ----FTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASL 294
+T + + A G EE RR ++ ++ KV Y+++
Sbjct: 705 DTGYYTLLSNIYAEEGEWEEFRRLRSAMKSSNLK-KVPGYSAI 746
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 165 bits (417), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 98/294 (33%), Positives = 166/294 (56%), Gaps = 6/294 (2%)
Query: 85 TWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFE 144
+ +++ Y R V + VF+ + VS +S+IS G + L FR+ ++ +
Sbjct: 304 SQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRK-MMRD 362
Query: 145 GIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLR 204
IKP+ T + L GC+++ G+ +HG + K G++ + G+ L+++Y K G
Sbjct: 363 SIKPNSFTLSSALRGCSNLAMFE--EGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSD 420
Query: 205 NAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACA 264
A +VF+ + E +V+S +I AQ GF EAL +FE+M G++PN++T VL AC
Sbjct: 421 MARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACN 480
Query: 265 HAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFG 324
++ LVEEG F + HYA +V L+G++GRLEEA E++ T + P++V++
Sbjct: 481 NSRLVEEGCELFDSFRKDKIMLTNDHYACMVDLLGRAGRLEEA-EMLTTEVINPDLVLWR 539
Query: 325 SFLSACKEHKQFEMAERVIEQVLRMVKPEDDRGIYRLIHDLYVMGEKWEEAAKL 378
+ LSACK H++ EMAER+ ++L ++P D+ G L+ +LY KW ++
Sbjct: 540 TLLSACKVHRKVEMAERITRKILE-IEPGDE-GTLILMSNLYASTGKWNRVIEM 591
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 144/274 (52%), Gaps = 5/274 (1%)
Query: 82 NTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVL 141
N + ++ Y + G + A+ V + ++D V ++++I Y+ G + + F+ +L
Sbjct: 200 NVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSML 259
Query: 142 LFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGG 201
+ E ++P++ T +VL C ++ +G GK +HG +VK+G+E +L+ MY +
Sbjct: 260 V-EKVQPNEYTYASVLISCGNLKDIG--NGKLIHGLMVKSGFESALASQTSLLTMYLRCS 316
Query: 202 VLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLS 261
++ ++ VF+ + N +SWT+LI G Q G E AL+ F KM ++PN T + L
Sbjct: 317 LVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALR 376
Query: 262 ACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVV 321
C++ + EEGR+ ++ YG + + + L+ L GK G + A + T+ E +V+
Sbjct: 377 GCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLS-EVDVI 435
Query: 322 VFGSFLSACKEHKQFEMAERVIEQVLRM-VKPED 354
+ + + ++ A + E+++ + ++P D
Sbjct: 436 SLNTMIYSYAQNGFGREALDLFERMINLGLQPND 469
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 139/260 (53%), Gaps = 6/260 (2%)
Query: 95 RSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAG 154
+ GD+ AR+VF+ +R V+ +S+I+ SK+ + ++ R+++ + PD+ T
Sbjct: 111 KCGDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMY-RLMITNNVLPDEYTLS 169
Query: 155 AVLSGCAHMGSLGLLAGKSVHGFIVKNGWEL-NAELGATLVNMYAKGGVLRNAAMVFELM 213
+V + + SL A +S HG V G E+ N +G+ LV+MY K G R A +V + +
Sbjct: 170 SVFKAFSDL-SLEKEAQRS-HGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRV 227
Query: 214 VERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGR 273
E++V+ TALI G +Q G EA+ F+ M V V+PNE T+ VL +C + + G+
Sbjct: 228 EEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGK 287
Query: 274 RYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEH 333
++ G E + SL+ + + ++++ + K ++ PN V + S +S ++
Sbjct: 288 LIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEY-PNQVSWTSLISGLVQN 346
Query: 334 KQFEMAERVIEQVLR-MVKP 352
+ EMA +++R +KP
Sbjct: 347 GREEMALIEFRKMMRDSIKP 366
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 83/384 (21%), Positives = 149/384 (38%), Gaps = 85/384 (22%)
Query: 4 YSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLLNAY 63
+ K+ R + +SF + L+ C S+L + +H + K GF
Sbjct: 356 FRKMMRDSIKPNSFTLSSALRGC-SNLAMFEEGRQIHGIVTKYGF--------------- 399
Query: 64 VLLSFLDACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISA 123
+R+ + +I Y + G AR VF+ + D +SL++MI +
Sbjct: 400 ----------------DRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYS 443
Query: 124 YNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGW 183
Y G ++ L LF R++ G++P+ VT +VL C + S + G + K+
Sbjct: 444 YAQNGFGREALDLFERMINL-GLQPNDVTVLSVLLACNN--SRLVEEGCELFDSFRKDKI 500
Query: 184 ELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEK 243
L + A +V++ + G L A M+ ++ +++ W L
Sbjct: 501 MLTNDHYACMVDLLGRAGRLEEAEMLTTEVINPDLVLWRTL------------------- 541
Query: 244 MRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDY--GMEPKVHHYASLVYLVGKS 301
LSAC VE R + I + G E + ++L GK
Sbjct: 542 ----------------LSACKVHRKVEMAERITRKILEIEPGDEGTLILMSNLYASTGKW 585
Query: 302 GRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQF--------EMAERVIEQVLRMVKPE 353
R+ E +K MK++ N + S++ KE F +E+++E + ++K
Sbjct: 586 NRVIEMKSKMKDMKLKKNPAM--SWVEINKETHTFMAGDLFSHPNSEQILENLEELIKKS 643
Query: 354 DDRGIYRLIHDLYVMGEKWEEAAK 377
D G + D + + EE AK
Sbjct: 644 KDLG---YVEDKSCVFQDMEETAK 664
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 100/212 (47%), Gaps = 18/212 (8%)
Query: 172 KSVHGFIVKNGWELNAEL-GATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQ 230
K++ ++K+G+ AE+ G+ LV+ K G + A VF+ M ER++++W +LI +
Sbjct: 85 KTIQAHMLKSGFP--AEISGSKLVDASLKCGDIDYARQVFDGMSERHIVTWNSLIAYLIK 142
Query: 231 WGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGME-PKVH 289
+EA+ ++ M V P+E T + V A + L +E +R + G+E V
Sbjct: 143 HRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVF 202
Query: 290 HYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRM 349
++LV + K G+ EA ++ ++ + V++ + ++ + E + ++
Sbjct: 203 VGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEK 262
Query: 350 VKPED--------------DRGIYRLIHDLYV 367
V+P + D G +LIH L V
Sbjct: 263 VQPNEYTYASVLISCGNLKDIGNGKLIHGLMV 294
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 165 bits (417), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 106/308 (34%), Positives = 161/308 (52%), Gaps = 28/308 (9%)
Query: 1 MHLYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLL 60
+ L++ + R GV + V + +C S L ++KL + L
Sbjct: 249 LRLFNDMLRLGVRPNETTWVIVISAC-----SFRADPSLTRSLVKL------IDEKRVRL 297
Query: 61 NAYVLLSFLD----------ACILFDEM-PNRNTVTWNTMIVGYSRSGDVQRAREVFEEA 109
N +V + LD A +F+E+ RN VTWN MI GY+R GD+ AR++F+
Sbjct: 298 NCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTM 357
Query: 110 PQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLL 169
P+R+ VS +S+I+ Y + G + + F ++ + KPD+VT +VLS C HM L L
Sbjct: 358 PKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLEL- 416
Query: 170 AGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAA 229
G + +I KN +LN +L+ MYA+GG L A VF+ M ER+V+S+ L A
Sbjct: 417 -GDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKERDVVSYNTLFTAFA 475
Query: 230 QWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVH 289
G E L + KM+ G+ P+ +T+T VL+AC AGL++EG+R FK I + P
Sbjct: 476 ANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRIFKSIRN----PLAD 531
Query: 290 HYASLVYL 297
HYA + L
Sbjct: 532 HYACMDLL 539
Score = 129 bits (323), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 88/293 (30%), Positives = 140/293 (47%), Gaps = 37/293 (12%)
Query: 70 DACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGS 129
+AC LFD MP + V+W MI G+++ D++ AR+ F+ P++ VS ++M+S Y G
Sbjct: 185 EACKLFDMMPENDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGF 244
Query: 130 SKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAEL 189
++ L LF +L G++P++ T V+S C+ L +S+ I + LN +
Sbjct: 245 TEDALRLFNDMLRL-GVRPNETTWVIVISACSFRADPSL--TRSLVKLIDEKRVRLNCFV 301
Query: 190 GATLVNMYAKG-------------GVLRN-------------------AAMVFELMVERN 217
L++M+AK G RN A +F+ M +RN
Sbjct: 302 KTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRN 361
Query: 218 VLSWTALICGAAQWGFCEEALVVFEKMRVAG-VRPNELTFTGVLSACAHAGLVEEGRRYF 276
V+SW +LI G A G A+ FE M G +P+E+T VLSAC H +E G
Sbjct: 362 VVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIV 421
Query: 277 KMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSA 329
I ++ Y SL+++ + G L EA + MK E +VV + + +A
Sbjct: 422 DYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMK-ERDVVSYNTLFTA 473
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 99/232 (42%), Gaps = 19/232 (8%)
Query: 102 AREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCA 161
R +F+ + ++SM ++ + + L L+ + GI PD + V+
Sbjct: 59 TRLIFDSVTFPNVFVVNSMFKYFSKMDMANDVLRLYEQRSRC-GIMPDAFSFPVVIKSAG 117
Query: 162 HMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSW 221
G L + K G+ + + +++MY K + +A VF+ + +R W
Sbjct: 118 RFGIL-------FQALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDW 170
Query: 222 TALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIED 281
+I G +WG EEA +F+ M V +++T +++ A +E R+YF D
Sbjct: 171 NVMISGYWKWGNKEEACKLFDMMPENDV----VSWTVMITGFAKVKDLENARKYF----D 222
Query: 282 YGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTM---KVEPNVVVFGSFLSAC 330
E V + +++ ++G E+A + M V PN + +SAC
Sbjct: 223 RMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISAC 274
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 164 bits (414), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 97/294 (32%), Positives = 170/294 (57%), Gaps = 7/294 (2%)
Query: 87 NTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGI 146
NT+I YS+ D++ A VF + + + +S+IS Y + S++ L R +L+ G
Sbjct: 319 NTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSEEASHLLREMLV-AGF 377
Query: 147 KPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNG-WELNAELGATLVNMYAKGGVLRN 205
+P+ +T ++L CA + +L GK H +I++ ++ L +LV++YAK G +
Sbjct: 378 QPNSITLASILPLCARIANLQ--HGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVA 435
Query: 206 AAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAH 265
A V +LM +R+ +++T+LI G G AL +F++M +G++P+ +T VLSAC+H
Sbjct: 436 AKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDHVTVVAVLSACSH 495
Query: 266 AGLVEEGRRYF-KMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFG 324
+ LV EG R F KM +YG+ P + H++ +V L G++G L +A +II M +P+ +
Sbjct: 496 SKLVHEGERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIHNMPYKPSGATWA 555
Query: 325 SFLSACKEHKQFEMAERVIEQVLRMVKPEDDRGIYRLIHDLYVMGEKWEEAAKL 378
+ L+AC H ++ + E++L M KPE+ G Y LI ++Y W + A++
Sbjct: 556 TLLNACHIHGNTQIGKWAAEKLLEM-KPENP-GYYVLIANMYAAAGSWSKLAEV 607
Score = 104 bits (260), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 97/363 (26%), Positives = 173/363 (47%), Gaps = 25/363 (6%)
Query: 4 YSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLLNAY 63
Y ++ G+ D+F LK+C L + + +H I ++ + L+V N L++ Y
Sbjct: 132 YKRMVSKGIRPDAFTYPSVLKACGETL-DVAFGRVVHGSI-EVSSYKSSLYVCNALISMY 189
Query: 64 VLLSFLD-ACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEE---APQRDSVSLSS 119
+ A LFD M R+ V+WN +I Y+ G A E+F++ + SV +
Sbjct: 190 KRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVITWN 249
Query: 120 MISAYN-NIGSSKQGLSLFRRVLLFE-GIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGF 177
+IS G+ L L R+ F + P + G L C+ +G++ L GK +HG
Sbjct: 250 IISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIG--LKACSLIGAIRL--GKEIHGL 305
Query: 178 IVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEA 237
+ + ++ + TL+ MY+K LR+A +VF E ++ +W ++I G AQ EEA
Sbjct: 306 AIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSEEA 365
Query: 238 LVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYF------KMIEDYGMEPKVHHY 291
+ +M VAG +PN +T +L CA ++ G+ + K +DY M +
Sbjct: 366 SHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTML-----W 420
Query: 292 ASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRM-V 350
SLV + KSG++ A ++ M + + V + S + + +A + +++ R +
Sbjct: 421 NSLVDVYAKSGKIVAAKQVSDLMS-KRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGI 479
Query: 351 KPE 353
KP+
Sbjct: 480 KPD 482
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 59/129 (45%), Gaps = 2/129 (1%)
Query: 152 TAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFE 211
+A ++LS C + + LAG VH + +G E ++ L LV Y+ + A + E
Sbjct: 45 SAASLLSACVDVRAF--LAGVQVHAHCISSGVEYHSVLVPKLVTFYSAFNLHNEAQSIIE 102
Query: 212 LMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEE 271
+ L W LI A+ EE + +++M G+RP+ T+ VL AC V
Sbjct: 103 NSDILHPLPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAF 162
Query: 272 GRRYFKMIE 280
GR IE
Sbjct: 163 GRVVHGSIE 171
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 163 bits (413), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 102/301 (33%), Positives = 173/301 (57%), Gaps = 14/301 (4%)
Query: 84 VTWNTMIVGYSRSGDVQRAREVFEE-APQRDSVSLSSMISAY--NNIGSSKQGLSLFRRV 140
T N +I Y + G++ ++F A +RD+V+ +SMIS Y N + + L F
Sbjct: 553 TTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWF--- 609
Query: 141 LLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKG 200
+L G + D VLS A + +L G VH V+ E + +G+ LV+MY+K
Sbjct: 610 MLQTGQRLDSFMYATVLSAFASVATLE--RGMEVHACSVRACLESDVVVGSALVDMYSKC 667
Query: 201 GVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAG-VRPNELTFTGV 259
G L A F M RN SW ++I G A+ G EEAL +FE M++ G P+ +TF GV
Sbjct: 668 GRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGV 727
Query: 260 LSACAHAGLVEEGRRYFKMIED-YGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEP 318
LSAC+HAGL+EEG ++F+ + D YG+ P++ H++ + ++G++G L++ + I+ M ++P
Sbjct: 728 LSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKP 787
Query: 319 NVVVFGSFLSAC--KEHKQFEMAERVIEQVLRMVKPEDDRGIYRLIHDLYVMGEKWEEAA 376
NV+++ + L AC ++ E+ ++ E + ++ +PE+ Y L+ ++Y G +WE+
Sbjct: 788 NVLIWRTVLGACCRANGRKAELGKKAAEMLFQL-EPENAVN-YVLLGNMYAAGGRWEDLV 845
Query: 377 K 377
K
Sbjct: 846 K 846
Score = 114 bits (286), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 90/310 (29%), Positives = 147/310 (47%), Gaps = 25/310 (8%)
Query: 64 VLLSFLDACI------------LFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQ 111
V LSF+ +C+ L+ +++ N +I Y +GD AR+VF+E P
Sbjct: 5 VPLSFVQSCVGHRGAARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPL 64
Query: 112 RDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAG 171
R+ VS + ++S Y+ G K+ L +F R ++ EGI +Q +VL C +GS+G+L G
Sbjct: 65 RNCVSWACIVSGYSRNGEHKEAL-VFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFG 123
Query: 172 KSVHGFIVKNGWELNAELGATLVNMYAKG-GVLRNAAMVFELMVERNVLSWTALICGAAQ 230
+ +HG + K + ++A + L++MY K G + A F + +N +SW ++I +Q
Sbjct: 124 RQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQ 183
Query: 231 WGFCEEALVVFEKMRVAGVRPNELTFTG-VLSACAHAGLVEEGRRYFKM----IEDYGME 285
G A +F M+ G RP E TF V +AC+ L E R + I+ G+
Sbjct: 184 AGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACS---LTEPDVRLLEQIMCTIQKSGLL 240
Query: 286 PKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQ 345
+ + LV KSG L A ++ M+ N V + K E A ++
Sbjct: 241 TDLFVGSGLVSAFAKSGSLSYARKVFNQMETR-NAVTLNGLMVGLVRQKWGEEATKLFMD 299
Query: 346 VLRM--VKPE 353
+ M V PE
Sbjct: 300 MNSMIDVSPE 309
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 117/243 (48%), Gaps = 3/243 (1%)
Query: 89 MIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKP 148
++ +++SG + AR+VF + R++V+L+ ++ ++ LF + + P
Sbjct: 249 LVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSP 308
Query: 149 DQ-VTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGW-ELNAELGATLVNMYAKGGVLRNA 206
+ V + + +GL G+ VHG ++ G + +G LVNMYAK G + +A
Sbjct: 309 ESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADA 368
Query: 207 AMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHA 266
VF M +++ +SW ++I G Q G EA+ ++ MR + P T LS+CA
Sbjct: 369 RRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASL 428
Query: 267 GLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSF 326
+ G++ G++ V +L+ L ++G L E +I +M E + V + S
Sbjct: 429 KWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMP-EHDQVSWNSI 487
Query: 327 LSA 329
+ A
Sbjct: 488 IGA 490
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 116/244 (47%), Gaps = 4/244 (1%)
Query: 87 NTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGI 146
N ++ Y++ G + AR VF +DSVS +SMI+ + G + + ++ + + I
Sbjct: 353 NGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHD-I 411
Query: 147 KPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNA 206
P T + LS CA + L G+ +HG +K G +LN + L+ +YA+ G L
Sbjct: 412 LPGSFTLISSLSSCASLKWAKL--GQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNEC 469
Query: 207 AMVFELMVERNVLSWTALICGAAQWGFC-EEALVVFEKMRVAGVRPNELTFTGVLSACAH 265
+F M E + +SW ++I A+ EA+V F + AG + N +TF+ VLSA +
Sbjct: 470 RKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSS 529
Query: 266 AGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGS 325
E G++ + + + +L+ GK G ++ +I M + V + S
Sbjct: 530 LSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNS 589
Query: 326 FLSA 329
+S
Sbjct: 590 MISG 593
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 43/85 (50%)
Query: 82 NTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVL 141
+ V + ++ YS+ G + A F P R+S S +SMIS Y G ++ L LF +
Sbjct: 653 DVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMK 712
Query: 142 LFEGIKPDQVTAGAVLSGCAHMGSL 166
L PD VT VLS C+H G L
Sbjct: 713 LDGQTPPDHVTFVGVLSACSHAGLL 737
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 74/147 (50%), Gaps = 10/147 (6%)
Query: 9 RTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLLNAYVLLSF 68
+TG DSF + T+ S + + +L +HA ++ + + V + L++ Y
Sbjct: 612 QTGQRLDSF-MYATVLSAFASVATLERGMEVHACSVRACL-ESDVVVGSALVDMYSKCGR 669
Query: 69 LD-ACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFE------EAPQRDSVSLSSMI 121
LD A F+ MP RN+ +WN+MI GY+R G + A ++FE + P D V+ ++
Sbjct: 670 LDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPP-DHVTFVGVL 728
Query: 122 SAYNNIGSSKQGLSLFRRVLLFEGIKP 148
SA ++ G ++G F + G+ P
Sbjct: 729 SACSHAGLLEEGFKHFESMSDSYGLAP 755
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 109/373 (29%), Positives = 180/373 (48%), Gaps = 39/373 (10%)
Query: 4 YSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLLNAY 63
+ + GV + +V L +C L + LHA+I+ GF HV N L+ Y
Sbjct: 434 FQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDE-HVKNSLITMY 492
Query: 64 VLLSFLDAC-ILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMIS 122
L + LF+ + NRN +TWN +M++
Sbjct: 493 AKCGDLSSSQDLFNGLDNRNIITWN-------------------------------AMLA 521
Query: 123 AYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNG 182
A + G ++ L L ++ F G+ DQ + LS A + L G+ +HG VK G
Sbjct: 522 ANAHHGHGEEVLKLVSKMRSF-GVSLDQFSFSEGLSAAAKLAVLE--EGQQLHGLAVKLG 578
Query: 183 WELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFE 242
+E ++ + +MY+K G + + V R++ SW LI + G+ EE F
Sbjct: 579 FEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFH 638
Query: 243 KMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMI-EDYGMEPKVHHYASLVYLVGKS 301
+M G++P +TF +L+AC+H GLV++G Y+ MI D+G+EP + H ++ L+G+S
Sbjct: 639 EMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRS 698
Query: 302 GRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPEDDRGIYRL 361
GRL EA I M ++PN +V+ S L++CK H + + E L ++PEDD +Y L
Sbjct: 699 GRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAEN-LSKLEPEDD-SVYVL 756
Query: 362 IHDLYVMGEKWEE 374
+++ +WE+
Sbjct: 757 SSNMFATTGRWED 769
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 137/272 (50%), Gaps = 4/272 (1%)
Query: 82 NTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVL 141
N + N ++ Y + G++ +R V + P+RD V+ +++I Y + L+ F+ +
Sbjct: 379 NQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQ-TM 437
Query: 142 LFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGG 201
EG+ + +T +VLS C G L L GK +H +IV G+E + + +L+ MYAK G
Sbjct: 438 RVEGVSSNYITVVSVLSACLLPGDL-LERGKPLHAYIVSAGFESDEHVKNSLITMYAKCG 496
Query: 202 VLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLS 261
L ++ +F + RN+++W A++ A G EE L + KMR GV ++ +F+ LS
Sbjct: 497 DLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLS 556
Query: 262 ACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVV 321
A A ++EEG++ + G E + + + K G + E +++ V ++
Sbjct: 557 AAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPP-SVNRSLP 615
Query: 322 VFGSFLSACKEHKQFEMAERVIEQVLRM-VKP 352
+ +SA H FE ++L M +KP
Sbjct: 616 SWNILISALGRHGYFEEVCATFHEMLEMGIKP 647
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 87/293 (29%), Positives = 140/293 (47%), Gaps = 15/293 (5%)
Query: 87 NTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGI 146
NT++ Y+ +G A VF++ P +D +S +S+++++ N G S L L ++ G
Sbjct: 283 NTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCS-MISSGK 341
Query: 147 KPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNA 206
+ VT + L+ C G+ +HG +V +G N +G LV+MY K G + +
Sbjct: 342 SVNYVTFTSALAAC--FTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSES 399
Query: 207 AMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHA 266
V M R+V++W ALI G A+ ++AL F+ MRV GV N +T VLSAC
Sbjct: 400 RRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLP 459
Query: 267 G-LVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGS 325
G L+E G+ I G E H SL+ + K G L + ++ + N++ + +
Sbjct: 460 GDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLD-NRNIITWNA 518
Query: 326 FLSACKEHKQFEMAERVIEQVLRMVKPEDDRGIYRLIHDLYVMGEKWEEAAKL 378
L+A H E+VL++V G+ D + E AAKL
Sbjct: 519 MLAANAHHGHG-------EEVLKLVSKMRSFGVSL---DQFSFSEGLSAAAKL 561
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 139/267 (52%), Gaps = 10/267 (3%)
Query: 110 PQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLL 169
P R+ VS ++M+S +G +G+ FR++ GIKP ++++ C GS+
Sbjct: 2 PVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDL-GIKPSSFVIASLVTACGRSGSM-FR 59
Query: 170 AGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAA 229
G VHGF+ K+G + + ++++Y G++ + VFE M +RNV+SWT+L+ G +
Sbjct: 60 EGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYS 119
Query: 230 QWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEE---GRRYFKMIEDYGMEP 286
G EE + +++ MR GV NE + + V+S+C GL+++ GR+ + G+E
Sbjct: 120 DKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSC---GLLKDESLGRQIIGQVVKSGLES 176
Query: 287 KVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQV 346
K+ SL+ ++G G ++ A I M E + + + S +A ++ E + R+ +
Sbjct: 177 KLAVENSLISMLGSMGNVDYANYIFDQMS-ERDTISWNSIAAAYAQNGHIEESFRIFSLM 235
Query: 347 LRMVKPEDDRGIYRLIHDL-YVMGEKW 372
R + + L+ L +V +KW
Sbjct: 236 RRFHDEVNSTTVSTLLSVLGHVDHQKW 262
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/330 (22%), Positives = 144/330 (43%), Gaps = 37/330 (11%)
Query: 1 MHLYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLL 60
M + K+ G+ SF I + +C +H + K G + ++V+ +L
Sbjct: 26 MEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLL-SDVYVSTAIL 84
Query: 61 NAYVLLSFLDAC-ILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSS 119
+ Y + + +F+EMP+RN V+W +++VGYS G+ + +++
Sbjct: 85 HLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIY------------- 131
Query: 120 MISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIV 179
+ + EG+ ++ + V+S C + L G+ + G +V
Sbjct: 132 -------------------KGMRGEGVGCNENSMSLVISSCGLLKDESL--GRQIIGQVV 170
Query: 180 KNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALV 239
K+G E + +L++M G + A +F+ M ER+ +SW ++ AQ G EE+
Sbjct: 171 KSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFR 230
Query: 240 VFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVG 299
+F MR N T + +LS H + GR ++ G + V +L+ +
Sbjct: 231 IFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYA 290
Query: 300 KSGRLEEAYEIIKTMKVEPNVVVFGSFLSA 329
+GR EA + K M + +++ + S +++
Sbjct: 291 GAGRSVEANLVFKQMPTK-DLISWNSLMAS 319
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 121/253 (47%), Gaps = 4/253 (1%)
Query: 87 NTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGI 146
N++I G+V A +F++ +RD++S +S+ +AY G ++ +F + F
Sbjct: 182 NSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHD- 240
Query: 147 KPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNA 206
+ + T +LS H+ G+ +HG +VK G++ + TL+ MYA G A
Sbjct: 241 EVNSTTVSTLLSVLGHVDHQKW--GRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEA 298
Query: 207 AMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHA 266
+VF+ M ++++SW +L+ G +AL + M +G N +TFT L+AC
Sbjct: 299 NLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTP 358
Query: 267 GLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSF 326
E+GR ++ G+ +LV + GK G + E+ ++ M +VV + +
Sbjct: 359 DFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMP-RRDVVAWNAL 417
Query: 327 LSACKEHKQFEMA 339
+ E + + A
Sbjct: 418 IGGYAEDEDPDKA 430
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 109/373 (29%), Positives = 180/373 (48%), Gaps = 39/373 (10%)
Query: 4 YSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLLNAY 63
+ + GV + +V L +C L + LHA+I+ GF HV N L+ Y
Sbjct: 451 FQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDE-HVKNSLITMY 509
Query: 64 VLLSFLDAC-ILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMIS 122
L + LF+ + NRN +TWN +M++
Sbjct: 510 AKCGDLSSSQDLFNGLDNRNIITWN-------------------------------AMLA 538
Query: 123 AYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNG 182
A + G ++ L L ++ F G+ DQ + LS A + L G+ +HG VK G
Sbjct: 539 ANAHHGHGEEVLKLVSKMRSF-GVSLDQFSFSEGLSAAAKLAVLE--EGQQLHGLAVKLG 595
Query: 183 WELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFE 242
+E ++ + +MY+K G + + V R++ SW LI + G+ EE F
Sbjct: 596 FEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFH 655
Query: 243 KMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMI-EDYGMEPKVHHYASLVYLVGKS 301
+M G++P +TF +L+AC+H GLV++G Y+ MI D+G+EP + H ++ L+G+S
Sbjct: 656 EMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRS 715
Query: 302 GRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPEDDRGIYRL 361
GRL EA I M ++PN +V+ S L++CK H + + E L ++PEDD +Y L
Sbjct: 716 GRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAEN-LSKLEPEDD-SVYVL 773
Query: 362 IHDLYVMGEKWEE 374
+++ +WE+
Sbjct: 774 SSNMFATTGRWED 786
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 150/284 (52%), Gaps = 10/284 (3%)
Query: 93 YSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVT 152
Y++ G V+ AR +F+ P R+ VS ++M+S +G +G+ FR++ GIKP
Sbjct: 2 YTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDL-GIKPSSFV 60
Query: 153 AGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFEL 212
++++ C GS+ G VHGF+ K+G + + ++++Y G++ + VFE
Sbjct: 61 IASLVTACGRSGSM-FREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEE 119
Query: 213 MVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEE- 271
M +RNV+SWT+L+ G + G EE + +++ MR GV NE + + V+S+C GL+++
Sbjct: 120 MPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSC---GLLKDE 176
Query: 272 --GRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSA 329
GR+ + G+E K+ SL+ ++G G ++ A I M E + + + S +A
Sbjct: 177 SLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMS-ERDTISWNSIAAA 235
Query: 330 CKEHKQFEMAERVIEQVLRMVKPEDDRGIYRLIHDL-YVMGEKW 372
++ E + R+ + R + + L+ L +V +KW
Sbjct: 236 YAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKW 279
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 137/272 (50%), Gaps = 4/272 (1%)
Query: 82 NTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVL 141
N + N ++ Y + G++ +R V + P+RD V+ +++I Y + L+ F+ +
Sbjct: 396 NQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQ-TM 454
Query: 142 LFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGG 201
EG+ + +T +VLS C G L L GK +H +IV G+E + + +L+ MYAK G
Sbjct: 455 RVEGVSSNYITVVSVLSACLLPGDL-LERGKPLHAYIVSAGFESDEHVKNSLITMYAKCG 513
Query: 202 VLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLS 261
L ++ +F + RN+++W A++ A G EE L + KMR GV ++ +F+ LS
Sbjct: 514 DLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLS 573
Query: 262 ACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVV 321
A A ++EEG++ + G E + + + K G + E +++ V ++
Sbjct: 574 AAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPP-SVNRSLP 632
Query: 322 VFGSFLSACKEHKQFEMAERVIEQVLRM-VKP 352
+ +SA H FE ++L M +KP
Sbjct: 633 SWNILISALGRHGYFEEVCATFHEMLEMGIKP 664
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 87/293 (29%), Positives = 140/293 (47%), Gaps = 15/293 (5%)
Query: 87 NTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGI 146
NT++ Y+ +G A VF++ P +D +S +S+++++ N G S L L ++ G
Sbjct: 300 NTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCS-MISSGK 358
Query: 147 KPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNA 206
+ VT + L+ C G+ +HG +V +G N +G LV+MY K G + +
Sbjct: 359 SVNYVTFTSALAAC--FTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSES 416
Query: 207 AMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHA 266
V M R+V++W ALI G A+ ++AL F+ MRV GV N +T VLSAC
Sbjct: 417 RRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLP 476
Query: 267 G-LVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGS 325
G L+E G+ I G E H SL+ + K G L + ++ + N++ + +
Sbjct: 477 GDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLD-NRNIITWNA 535
Query: 326 FLSACKEHKQFEMAERVIEQVLRMVKPEDDRGIYRLIHDLYVMGEKWEEAAKL 378
L+A H E+VL++V G+ D + E AAKL
Sbjct: 536 MLAANAHHGHG-------EEVLKLVSKMRSFGVSL---DQFSFSEGLSAAAKL 578
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/330 (22%), Positives = 144/330 (43%), Gaps = 37/330 (11%)
Query: 1 MHLYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLL 60
M + K+ G+ SF I + +C +H + K G + ++V+ +L
Sbjct: 43 MEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLL-SDVYVSTAIL 101
Query: 61 NAYVLLSFLDAC-ILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSS 119
+ Y + + +F+EMP+RN V+W +++VGYS G+ + +++
Sbjct: 102 HLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIY------------- 148
Query: 120 MISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIV 179
+ + EG+ ++ + V+S C + L G+ + G +V
Sbjct: 149 -------------------KGMRGEGVGCNENSMSLVISSCGLLKDESL--GRQIIGQVV 187
Query: 180 KNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALV 239
K+G E + +L++M G + A +F+ M ER+ +SW ++ AQ G EE+
Sbjct: 188 KSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFR 247
Query: 240 VFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVG 299
+F MR N T + +LS H + GR ++ G + V +L+ +
Sbjct: 248 IFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYA 307
Query: 300 KSGRLEEAYEIIKTMKVEPNVVVFGSFLSA 329
+GR EA + K M + +++ + S +++
Sbjct: 308 GAGRSVEANLVFKQMPTK-DLISWNSLMAS 336
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 121/253 (47%), Gaps = 4/253 (1%)
Query: 87 NTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGI 146
N++I G+V A +F++ +RD++S +S+ +AY G ++ +F + F
Sbjct: 199 NSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHD- 257
Query: 147 KPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNA 206
+ + T +LS H+ G+ +HG +VK G++ + TL+ MYA G A
Sbjct: 258 EVNSTTVSTLLSVLGHVDHQKW--GRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEA 315
Query: 207 AMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHA 266
+VF+ M ++++SW +L+ G +AL + M +G N +TFT L+AC
Sbjct: 316 NLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTP 375
Query: 267 GLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSF 326
E+GR ++ G+ +LV + GK G + E+ ++ M +VV + +
Sbjct: 376 DFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMP-RRDVVAWNAL 434
Query: 327 LSACKEHKQFEMA 339
+ E + + A
Sbjct: 435 IGGYAEDEDPDKA 447
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 68/133 (51%), Gaps = 2/133 (1%)
Query: 196 MYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELT 255
MY K G ++ A +F++M RN +SW ++ G + G E + F KM G++P+
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60
Query: 256 FTGVLSACAHAG-LVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTM 314
+++AC +G + EG + + G+ V+ ++++L G G + + ++ + M
Sbjct: 61 IASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEM 120
Query: 315 KVEPNVVVFGSFL 327
+ NVV + S +
Sbjct: 121 P-DRNVVSWTSLM 132
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 100/298 (33%), Positives = 169/298 (56%), Gaps = 8/298 (2%)
Query: 53 LHVANCLLNAYVLLSFLD-ACILFDEMPN-RNTVTWNTMIVGYSRSGDVQRAREVFEEAP 110
L N ++N Y+ L+ A LF+ + + + V+W +MI GY +GDV RA +F++
Sbjct: 368 LQSCNIIINRYLKNGDLERAETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLH 427
Query: 111 QRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLA 170
+D V+ + MIS + SL ++ G+KP T +LS +L
Sbjct: 428 DKDGVTWTVMISGLVQNELFAEAASLLSDMVRC-GLKPLNSTYSVLLSSAGATSNLD--Q 484
Query: 171 GKSVHGFIVKNG--WELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGA 228
GK +H I K ++ + L +LV+MYAK G + +A +F MV+++ +SW ++I G
Sbjct: 485 GKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKDTVSWNSMIMGL 544
Query: 229 AQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFK-MIEDYGMEPK 287
+ G ++AL +F++M +G +PN +TF GVLSAC+H+GL+ G FK M E Y ++P
Sbjct: 545 SHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAMKETYSIQPG 604
Query: 288 VHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQ 345
+ HY S++ L+G++G+L+EA E I + P+ V+G+ L C + + + AE + E+
Sbjct: 605 IDHYISMIDLLGRAGKLKEAEEFISALPFTPDHTVYGALLGLCGLNWRDKDAEGIAER 662
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 85/345 (24%), Positives = 153/345 (44%), Gaps = 68/345 (19%)
Query: 70 DACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGS 129
+A +LF +M +N VTW +M+ GY R GDV+ A +F E P+R+ VS ++MIS +
Sbjct: 218 EAKLLFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNEL 277
Query: 130 SKQGLSLFRRVLL-FEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWEL--- 185
++ L LF + + + P+ T ++ C +G G+ +H ++ NGWE
Sbjct: 278 YREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDH 337
Query: 186 NAELGATLVNMYAKGGVLRNAAMVF-------------------------ELMVER---- 216
+ L +LV+MYA G++ +A + E + ER
Sbjct: 338 DGRLAKSLVHMYASSGLIASAQSLLNESFDLQSCNIIINRYLKNGDLERAETLFERVKSL 397
Query: 217 -NVLSWTALICGAAQWGFCEEALVVFEKMR----------VAGVRPNEL----------- 254
+ +SWT++I G + G A +F+K+ ++G+ NEL
Sbjct: 398 HDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDM 457
Query: 255 ----------TFTGVLSACAHAGLVEEGRRYFKMIEDYGM--EPKVHHYASLVYLVGKSG 302
T++ +LS+ +++G+ +I +P + SLV + K G
Sbjct: 458 VRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCG 517
Query: 303 RLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVL 347
+E+AYEI M V+ + V + S + H + A + +++L
Sbjct: 518 AIEDAYEIFAKM-VQKDTVSWNSMIMGLSHHGLADKALNLFKEML 561
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 146/317 (46%), Gaps = 34/317 (10%)
Query: 59 LLNAYVLLSFLD-ACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSL 117
LL+ Y +LD A +LF+ MP RN VT N M+ GY + + A +F E P ++ VS
Sbjct: 83 LLSKYAKTGYLDEARVLFEVMPERNIVTCNAMLTGYVKCRRMNEAWTLFREMP-KNVVSW 141
Query: 118 SSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAH--------MGSLGLL 169
+ M++A + G S+ + LF + + + + G + +G M S ++
Sbjct: 142 TVMLTALCDDGRSEDAVELFDEMPERNVVSWNTLVTGLIRNGDMEKAKQVFDAMPSRDVV 201
Query: 170 AGKS-VHGFIVKNGW-----------ELNAELGATLVNMYAKGGVLRNAAMVFELMVERN 217
+ + + G+I +G E N ++V Y + G +R A +F M ERN
Sbjct: 202 SWNAMIKGYIENDGMEEAKLLFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERN 261
Query: 218 VLSWTALICGAAQWGFCEEALVVFEKMR--VAGVRPNELTFTGVLSACAHAGL--VEEGR 273
++SWTA+I G A EAL++F +M+ V V PN T + AC G+ G
Sbjct: 262 IVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRLGE 321
Query: 274 RYFKMIEDYGMEPKVHH---YASLVYLVGKSGRLEEAYEII-KTMKVEPNVVVFGSFLSA 329
+ + G E H SLV++ SG + A ++ ++ ++ ++ +L
Sbjct: 322 QLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNESFDLQSCNIIINRYL-- 379
Query: 330 CKEHKQFEMAERVIEQV 346
++ E AE + E+V
Sbjct: 380 --KNGDLERAETLFERV 394
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 162 bits (411), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 107/336 (31%), Positives = 174/336 (51%), Gaps = 25/336 (7%)
Query: 61 NAYVLLSFLDACI-------LFDEM-----------PNRNTVTWNTMIVGYSRSGDVQRA 102
N LLS L AC+ L E+ R T + TM Y R G+V +
Sbjct: 250 NRVTLLSVLPACVELNYGSSLVKEIHGFSFRHGCHADERLTAAFMTM---YCRCGNVSLS 306
Query: 103 REVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAH 162
R +FE + RD V SSMIS Y G + ++L + + EGI+ + VT A++S C +
Sbjct: 307 RVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQ-MRKEGIEANSVTLLAIVSACTN 365
Query: 163 MGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWT 222
L +VH I+K G+ + LG L++MYAK G L A VF + E++++SW+
Sbjct: 366 STLLSF--ASTVHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELTEKDLVSWS 423
Query: 223 ALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDY 282
++I G EAL +F+ M G +++ F +LSAC HAGLVEE + F Y
Sbjct: 424 SMINAYGLHGHGSEALEIFKGMIKGGHEVDDMAFLAILSACNHAGLVEEAQTIFTQAGKY 483
Query: 283 GMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERV 342
M + HYA + L+G+ G++++A+E+ M ++P+ ++ S LSAC+ H + ++A ++
Sbjct: 484 HMPVTLEHYACYINLLGRFGKIDDAFEVTINMPMKPSARIWSSLLSACETHGRLDVAGKI 543
Query: 343 IEQVLRMVKPEDDRGIYRLIHDLYVMGEKWEEAAKL 378
I L +P D+ Y L+ ++ + A ++
Sbjct: 544 IANELMKSEP-DNPANYVLLSKIHTESGNYHAAEEV 578
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 83/332 (25%), Positives = 157/332 (47%), Gaps = 21/332 (6%)
Query: 7 LHRTGVPFDSFCIVFTLKSCTSH---LHSLTIIQHLHAHIIKLGFAPTHLHVANCLL--- 60
LHR V S+C + + SC ++ +I+ ++ + GF P VA+ L
Sbjct: 109 LHRDTV---SYCSI--INSCCQDGLLYEAMKLIKEMYFY----GFIPKSELVASLLALCT 159
Query: 61 ---NAYVLLSFLDACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSL 117
++ + A +L DE + + ++ Y + D A VF++ ++ VS
Sbjct: 160 RMGSSSKVARMFHALVLVDERMQESVLLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVSW 219
Query: 118 SSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGF 177
++MIS + + G+ LF R + E ++P++VT +VL C + + G K +HGF
Sbjct: 220 TAMISGCVANQNYEMGVDLF-RAMQRENLRPNRVTLLSVLPACVEL-NYGSSLVKEIHGF 277
Query: 178 IVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEA 237
++G + L A + MY + G + + ++FE R+V+ W+++I G A+ G C E
Sbjct: 278 SFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEV 337
Query: 238 LVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYL 297
+ + +MR G+ N +T ++SAC ++ L+ I G + +L+ +
Sbjct: 338 MNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQILKCGFMSHILLGNALIDM 397
Query: 298 VGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSA 329
K G L A E+ + E ++V + S ++A
Sbjct: 398 YAKCGSLSAAREVFYEL-TEKDLVSWSSMINA 428
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 120/266 (45%), Gaps = 11/266 (4%)
Query: 72 CILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSK 131
C+ + +TV N++I Y++ R+VF+E RD+VS S+I++ G
Sbjct: 71 CLCLKAGADCDTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDGLLY 130
Query: 132 QGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFI-VKNGWELNAELG 190
+ + L + + F G P ++L+ C MGS +A + H + V + + L
Sbjct: 131 EAMKLIKE-MYFYGFIPKSELVASLLALCTRMGSSSKVA-RMFHALVLVDERMQESVLLS 188
Query: 191 ATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVR 250
LV+MY K A VF+ M +N +SWTA+I G E + +F M+ +R
Sbjct: 189 TALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLR 248
Query: 251 PNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHH----YASLVYLVGKSGRLEE 306
PN +T VL AC + G K I + H A+ + + + G +
Sbjct: 249 PNRVTLLSVLPACVE---LNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSL 305
Query: 307 AYEIIKTMKVEPNVVVFGSFLSACKE 332
+ + +T KV +VV++ S +S E
Sbjct: 306 SRVLFETSKVR-DVVMWSSMISGYAE 330
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 86/186 (46%), Gaps = 4/186 (2%)
Query: 155 AVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMV 214
+V+ CA LL G +H +K G + + + +L++MYAK VF+ M+
Sbjct: 51 SVIKACAFQQEPFLL-GAQLHCLCLKAGADCDTVVSNSLISMYAKFSRKYAVRKVFDEML 109
Query: 215 ERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRR 274
R+ +S+ ++I Q G EA+ + ++M G P +L+ C G + R
Sbjct: 110 HRDTVSYCSIINSCCQDGLLYEAMKLIKEMYFYGFIPKSELVASLLALCTRMGSSSKVAR 169
Query: 275 YFK--MIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKE 332
F ++ D M+ V +LV + K A+ + M+V+ N V + + +S C
Sbjct: 170 MFHALVLVDERMQESVLLSTALVDMYLKFDDHAAAFHVFDQMEVK-NEVSWTAMISGCVA 228
Query: 333 HKQFEM 338
++ +EM
Sbjct: 229 NQNYEM 234
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 162 bits (410), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 101/334 (30%), Positives = 180/334 (53%), Gaps = 12/334 (3%)
Query: 1 MHLYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLL 60
+ L+ ++ + G + LKSC +T +Q LH+ I+++G+ +V + L+
Sbjct: 401 LSLFLQMLQMGFRPTEYTFSTALKSCC-----VTELQQLHSVIVRMGYEDND-YVLSSLM 454
Query: 61 NAYVLLSFL-DACILFDEMPNRNTVTWNTMIVG-YSRSGDVQRAREVFEEAPQRDSVSLS 118
+Y + DA +L D +V ++ G YSR G + ++ Q D+VS +
Sbjct: 455 RSYAKNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWN 514
Query: 119 SMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFI 178
I+A + ++ + LF+ +L I+PD+ T ++LS C+ + L L G S+HG I
Sbjct: 515 IAIAACSRSDYHEEVIELFKH-MLQSNIRPDKYTFVSILSLCSKLCDLTL--GSSIHGLI 571
Query: 179 VKNGWEL-NAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEA 237
K + + + L++MY K G +R+ VFE E+N+++WTALI G+ +EA
Sbjct: 572 TKTDFSCADTFVCNVLIDMYGKCGSIRSVMKVFEETREKNLITWTALISCLGIHGYGQEA 631
Query: 238 LVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYL 297
L F++ G +P+ ++F +L+AC H G+V+EG F+ ++DYG+EP++ HY V L
Sbjct: 632 LEKFKETLSLGFKPDRVSFISILTACRHGGMVKEGMGLFQKMKDYGVEPEMDHYRCAVDL 691
Query: 298 VGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSACK 331
+ ++G L+EA +I+ M + V+ +FL C
Sbjct: 692 LARNGYLKEAEHLIREMPFPADAPVWRTFLDGCN 725
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 142/298 (47%), Gaps = 38/298 (12%)
Query: 87 NTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGI 146
N++I Y + G+ A +F++A D VS +++I A + + L LF + G
Sbjct: 254 NSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVS-MPEHGF 312
Query: 147 KPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNA 206
P+Q T +VL G + + L L G+ +HG ++KNG E LG L++ YAK G L ++
Sbjct: 313 SPNQGTYVSVL-GVSSLVQL-LSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDS 370
Query: 207 AMVFELMVERNVLSWTALICGAAQWG--FCEEALVVFEKMRVAGVRPNELTFTGVLSACA 264
+ F+ + ++N++ W AL+ G A C L +F +M G RP E TF+ L +C
Sbjct: 371 RLCFDYIRDKNIVCWNALLSGYANKDGPIC---LSLFLQMLQMGFRPTEYTFSTALKSCC 427
Query: 265 -------HAGLVEEG------------RRYFK--------MIEDYGMEPKVHHYASLVY- 296
H+ +V G R Y K ++ D+ P ++V
Sbjct: 428 VTELQQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAG 487
Query: 297 LVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRM-VKPE 353
+ + G+ E+ ++I T++ +P+ V + ++AC E + + +L+ ++P+
Sbjct: 488 IYSRRGQYHESVKLISTLE-QPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPD 544
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 111/227 (48%), Gaps = 6/227 (2%)
Query: 87 NTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGI 146
N +I Y + G+V A +VF++ P+R+ VS +++I Y+ G + +F + F G
Sbjct: 53 NNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYF-GY 111
Query: 147 KPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNG-WELNAELGATLVNMYAKGGVLRN 205
P+Q T +LS CA SL + AG +HG +K G + +A +G L+ +Y + +L
Sbjct: 112 LPNQSTVSGLLS-CA---SLDVRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEM 167
Query: 206 AAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAH 265
A VFE M +++ +W ++ GF +E + F ++ G E +F GVL +
Sbjct: 168 AEQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSC 227
Query: 266 AGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIK 312
++ ++ G++ ++ SL+ GK G A + +
Sbjct: 228 VKDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQ 274
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 118/257 (45%), Gaps = 5/257 (1%)
Query: 93 YSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVT 152
Y R ++ A +VFE+ P + + + M+S + G K+ + FR L+ G + +
Sbjct: 159 YGRLDLLEMAEQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRE-LVRMGASLTESS 217
Query: 153 AGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFEL 212
VL G + + L + K +H K G + + +L++ Y K G A +F+
Sbjct: 218 FLGVLKGVSCVKDLDI--SKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQD 275
Query: 213 MVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEG 272
+++SW A+IC A+ +AL +F M G PN+ T+ VL + L+ G
Sbjct: 276 AGSWDIVSWNAIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCG 335
Query: 273 RRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKE 332
R+ M+ G E + +L+ K G LE++ ++ + N+V + + LS
Sbjct: 336 RQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIR-DKNIVCWNALLSG-YA 393
Query: 333 HKQFEMAERVIEQVLRM 349
+K + + Q+L+M
Sbjct: 394 NKDGPICLSLFLQMLQM 410
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 65/124 (52%), Gaps = 3/124 (2%)
Query: 192 TLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRP 251
++++Y K G + A VF+ M ERN +S+ +I G +++G ++A VF +MR G P
Sbjct: 54 NIISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLP 113
Query: 252 NELTFTGVLSACAHAGLVEEGRRYFKMIEDYGM-EPKVHHYASLVYLVGKSGRLEEAYEI 310
N+ T +G+LS CA V G + + YG+ L+ L G+ LE A ++
Sbjct: 114 NQSTVSGLLS-CASLD-VRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQV 171
Query: 311 IKTM 314
+ M
Sbjct: 172 FEDM 175
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 97/308 (31%), Positives = 169/308 (54%), Gaps = 5/308 (1%)
Query: 74 LFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQG 133
+FD++ N V N+++ R+G++ A E F+ P D VS +++I+ ++ G +
Sbjct: 143 MFDDILNPCVVACNSLLDACGRNGEMDYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKA 202
Query: 134 LSLFRRVLLFEG--IKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGA 191
L +F ++ E I P++ T +VLS CA+ G+ GK +HG+++ L LG
Sbjct: 203 LMVFGEMIQNERAVITPNEATFVSVLSSCANFDQGGIRLGKQIHGYVMSKEIILTTTLGT 262
Query: 192 TLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRP 251
L++MY K G L A +F+ + ++ V +W A+I A G ++AL +FE M+ + V P
Sbjct: 263 ALLDMYGKAGDLEMALTIFDQIRDKKVCAWNAIISALASNGRPKQALEMFEMMKSSYVHP 322
Query: 252 NELTFTGVLSACAHAGLVEEGRRYFKMI-EDYGMEPKVHHYASLVYLVGKSGRLEEAYEI 310
N +T +L+ACA + LV+ G + F I +Y + P HY +V L+G++G L +A
Sbjct: 323 NGITLLAILTACARSKLVDLGIQLFSSICSEYKIIPTSEHYGCVVDLIGRAGLLVDAANF 382
Query: 311 IKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPEDDRGIYRLIHDLYVMGE 370
I+++ EP+ V G+ L ACK H+ E+ V +Q++ + +P+ G Y + +
Sbjct: 383 IQSLPFEPDASVLGALLGACKIHENTELGNTVGKQLIGL-QPQ-HCGQYVALSTFNALDS 440
Query: 371 KWEEAAKL 378
W EA K+
Sbjct: 441 NWSEAEKM 448
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 112/428 (26%), Positives = 207/428 (48%), Gaps = 55/428 (12%)
Query: 1 MHLYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLL 60
+ ++ K+ GV ++ I+ + +C S L + +H+ +K+GF L V N L+
Sbjct: 337 LDMFRKMFLAGVVPNAVTIMSAVSAC-SCLKVINQGSEVHSIAVKMGFIDDVL-VGNSLV 394
Query: 61 NAYVLLSFL-DACILFDEMPNR-----------------------------------NTV 84
+ Y L DA +FD + N+ N +
Sbjct: 395 DMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNII 454
Query: 85 TWNTMIVGYSRSGDVQRAREVFEEAP-----QRDSVSLSSMISAYNNIGSSKQGLSLFRR 139
TWNTMI GY ++GD A ++F+ QR++ + + +I+ Y G + L LFR+
Sbjct: 455 TWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRK 514
Query: 140 VLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAK 199
+ F P+ VT ++L CA++ LG + +HG +++ + + L + YAK
Sbjct: 515 -MQFSRFMPNSVTILSLLPACANL--LGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAK 571
Query: 200 GGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGV 259
G + + +F M +++++W +LI G G AL +F +M+ G+ PN T + +
Sbjct: 572 SGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSI 631
Query: 260 LSACAHAGLVEEGRR-YFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEP 318
+ A G V+EG++ ++ + DY + P + H +++VYL G++ RLEEA + I+ M ++
Sbjct: 632 ILAHGLMGNVDEGKKVFYSIANDYHIIPALEHCSAMVYLYGRANRLEEALQFIQEMNIQS 691
Query: 319 NVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPEDDRGIYRLIHDLYVMGEKWEEAAKL 378
++ SFL+ C+ H +MA E + + +PE + ++ +Y +G AKL
Sbjct: 692 ETPIWESFLTGCRIHGDIDMAIHAAENLFSL-EPE-NTATESIVSQIYALG------AKL 743
Query: 379 GPGFDFNR 386
G + N+
Sbjct: 744 GRSLEGNK 751
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 100/390 (25%), Positives = 180/390 (46%), Gaps = 49/390 (12%)
Query: 3 LYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLLNA 62
L+ + + GV D F L+ C ++ + + +H+ +IKLG + L V+N +L
Sbjct: 168 LFRLMMKDGVLPDDFLFPKILQGC-ANCGDVEAGKVIHSVVIKLGMSSC-LRVSNSILAV 225
Query: 63 YVLLSFLD-ACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQR--------- 112
Y LD A F M R+ + WN++++ Y ++G + A E+ +E +
Sbjct: 226 YAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTW 285
Query: 113 ------------------------------DSVSLSSMISAYNNIGSSKQGLSLFRRVLL 142
D + ++MIS + G Q L +FR++ L
Sbjct: 286 NILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFL 345
Query: 143 FEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGV 202
G+ P+ VT + +S C+ + + G VH VK G+ + +G +LV+MY+K G
Sbjct: 346 -AGVVPNAVTIMSAVSACSCLKVIN--QGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGK 402
Query: 203 LRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSA 262
L +A VF+ + ++V +W ++I G Q G+C +A +F +M+ A +RPN +T+ ++S
Sbjct: 403 LEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISG 462
Query: 263 CAHAGLVEEGRRYFKMIEDYG-MEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVE---P 318
G E F+ +E G ++ + ++ ++G+ +EA E+ + M+ P
Sbjct: 463 YIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMP 522
Query: 319 NVVVFGSFLSACKEHKQFEMAERVIEQVLR 348
N V S L AC +M + VLR
Sbjct: 523 NSVTILSLLPACANLLGAKMVREIHGCVLR 552
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 142/289 (49%), Gaps = 7/289 (2%)
Query: 93 YSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVT 152
Y++ G + AR+VF+ +R+ + S+MI AY+ ++ LFR +++ +G+ PD
Sbjct: 125 YAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFR-LMMKDGVLPDDFL 183
Query: 153 AGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFEL 212
+L GCA+ G + AGK +H ++K G + +++ +YAK G L A F
Sbjct: 184 FPKILQGCANCGDVE--AGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRR 241
Query: 213 MVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEG 272
M ER+V++W +++ Q G EEA+ + ++M G+ P +T+ ++ G +
Sbjct: 242 MRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAA 301
Query: 273 RRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTM---KVEPNVVVFGSFLSA 329
+ +E +G+ V + +++ + +G +A ++ + M V PN V S +SA
Sbjct: 302 MDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSA 361
Query: 330 CKEHKQFEMAERVIEQVLRMVKPEDDRGIYRLIHDLYVMGEKWEEAAKL 378
C K V ++M DD + + D+Y K E+A K+
Sbjct: 362 CSCLKVINQGSEVHSIAVKM-GFIDDVLVGNSLVDMYSKCGKLEDARKV 409
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 103/216 (47%), Gaps = 11/216 (5%)
Query: 141 LLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVH---GFIVKNGWELNAELGATLVNMY 197
L +G K + T +L C GS+ L G+ +H G E + + L++MY
Sbjct: 72 LFQQGSKVKRSTYLKLLESCIDSGSIHL--GRILHARFGLFT----EPDVFVETKLLSMY 125
Query: 198 AKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFT 257
AK G + +A VF+ M ERN+ +W+A+I ++ E +F M GV P++ F
Sbjct: 126 AKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFP 185
Query: 258 GVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVE 317
+L CA+ G VE G+ ++ GM + S++ + K G L+ A + + M+ E
Sbjct: 186 KILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMR-E 244
Query: 318 PNVVVFGSFLSA-CKEHKQFEMAERVIEQVLRMVKP 352
+V+ + S L A C+ K E E V E + P
Sbjct: 245 RDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISP 280
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 105/378 (27%), Positives = 194/378 (51%), Gaps = 37/378 (9%)
Query: 3 LYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLLNA 62
L+ ++ R V D + L +C+ H + + LH +IK G N L++
Sbjct: 292 LFIQMQRHWVETDIYTYTGLLSACSGEEHQI-FGKSLHGMVIKKGLEQV-TSATNALISM 349
Query: 63 YVLLSFLDACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMIS 122
Y+ + P +G ++ A +FE +D +S +S+I+
Sbjct: 350 YI------------QFP----------------TGTMEDALSLFESLKSKDLISWNSIIT 381
Query: 123 AYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNG 182
+ G S+ + F + E IK D A+L C+ + +L L G+ +H K+G
Sbjct: 382 GFAQKGLSEDAVKFFSYLRSSE-IKVDDYAFSALLRSCSDLATLQL--GQQIHALATKSG 438
Query: 183 WELNAELGATLVNMYAKGGVLRNAAMVFELMVER-NVLSWTALICGAAQWGFCEEALVVF 241
+ N + ++L+ MY+K G++ +A F+ + + + ++W A+I G AQ G + +L +F
Sbjct: 439 FVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLF 498
Query: 242 EKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIED-YGMEPKVHHYASLVYLVGK 300
+M V+ + +TFT +L+AC+H GL++EG ++E Y ++P++ HYA+ V L+G+
Sbjct: 499 SQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNLMEPVYKIQPRMEHYAAAVDLLGR 558
Query: 301 SGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPEDDRGIYR 360
+G + +A E+I++M + P+ +V +FL C+ + EMA +V +L ++PED
Sbjct: 559 AGLVNKAKELIESMPLNPDPMVLKTFLGVCRACGEIEMATQVANHLLE-IEPEDHFTYVS 617
Query: 361 LIHDLYVMGEKWEEAAKL 378
L H +Y +KWEE A +
Sbjct: 618 LSH-MYSDLKKWEEKASV 634
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 92/339 (27%), Positives = 147/339 (43%), Gaps = 80/339 (23%)
Query: 40 HAHIIKLGFAPTHLHVANCLLNAYVLLSFLD-ACILFDEMPNRNTVTWNTMIVGYSRSGD 98
H + IK G + + ++V+N +L++Y+ FL A +LFDEMP R++V+WNTMI GY+ G
Sbjct: 23 HCYAIKCG-SISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGK 81
Query: 99 VQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLS 158
++ A +F + GS G S R +L
Sbjct: 82 LEDAWCLF---------------TCMKRSGSDVDGYSFSR-----------------LLK 109
Query: 159 GCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNV 218
G A + L G+ VHG ++K G+E N +G++LV+MYAK + +A F+ + E N
Sbjct: 110 GIASVKRFDL--GEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEISEPNS 167
Query: 219 LSWTALICGAAQ--------W----------------------------GFCEEALVVFE 242
+SW ALI G Q W FC V
Sbjct: 168 VSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMFCNLLKQVHA 227
Query: 243 KMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSG 302
K+ G++ ++S+ A G V + +R F + G + + S++ K
Sbjct: 228 KVLKLGLQHEITICNAMISSYADCGSVSDAKRVF---DGLGGSKDLISWNSMIAGFSKHE 284
Query: 303 RLEEAYEIIKTMK---VEPNVVVFGSFLSAC--KEHKQF 336
E A+E+ M+ VE ++ + LSAC +EH+ F
Sbjct: 285 LKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIF 323
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 124/250 (49%), Gaps = 6/250 (2%)
Query: 87 NTMIVGYSRSGDVQRAREVFEE-APQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEG 145
N MI Y+ G V A+ VF+ +D +S +SMI+ ++ + LF + +
Sbjct: 242 NAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQ-MQRHW 300
Query: 146 IKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAK--GGVL 203
++ D T +LS C+ G + GKS+HG ++K G E L++MY + G +
Sbjct: 301 VETDIYTYTGLLSACS--GEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTM 358
Query: 204 RNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSAC 263
+A +FE + ++++SW ++I G AQ G E+A+ F +R + ++ ++ F+ +L +C
Sbjct: 359 EDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSC 418
Query: 264 AHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVF 323
+ ++ G++ + G +SL+ + K G +E A + + + + + V +
Sbjct: 419 SDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAW 478
Query: 324 GSFLSACKEH 333
+ + +H
Sbjct: 479 NAMILGYAQH 488
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 78/155 (50%), Gaps = 1/155 (0%)
Query: 174 VHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGF 233
H + +K G + + +++ Y K G L A M+F+ M +R+ +SW +I G G
Sbjct: 22 THCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGK 81
Query: 234 CEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYAS 293
E+A +F M+ +G + +F+ +L A + G + ++ G E V+ +S
Sbjct: 82 LEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSS 141
Query: 294 LVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLS 328
LV + K R+E+A+E K + EPN V + + ++
Sbjct: 142 LVDMYAKCERVEDAFEAFKEIS-EPNSVSWNALIA 175
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 159 bits (403), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 112/383 (29%), Positives = 193/383 (50%), Gaps = 12/383 (3%)
Query: 1 MHLYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLL 60
+ Y + R G DS+ V +L SC + + H IK G L V N L+
Sbjct: 103 LGFYFDILRFGFVPDSYTFV-SLISCIEKTCCVDSGKMCHGQAIKHGCDQV-LPVQNSLM 160
Query: 61 NAYVLLSFLD-ACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSS 119
+ Y LD A LF E+P R+ V+WN++I G R+GDV A ++F+E P ++ +S +
Sbjct: 161 HMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIISWNI 220
Query: 120 MISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIV 179
MISAY + +SLFR ++ G + ++ T +L+ C S L G+SVH ++
Sbjct: 221 MISAYLGANNPGVSISLFRE-MVRAGFQGNESTLVLLLNACGR--SARLKEGRSVHASLI 277
Query: 180 KNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALV 239
+ + + L++MY K + A +F+ + RN ++W +I G E L
Sbjct: 278 RTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGRPEGGLE 337
Query: 240 VFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFK-MIEDYGMEPKVHHYASLVYLV 298
+FE M +RP+E+TF GVL CA AGLV +G+ Y+ M++++ ++P H + L
Sbjct: 338 LFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPNFGHQWCMANLY 397
Query: 299 GKSGRLEEAYEIIKTM---KVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPEDD 355
+G EEA E +K + V P + + LS+ + + E + + ++ P +
Sbjct: 398 SSAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTGNPTLGESIAKSLIE-TDPLNY 456
Query: 356 RGIYRLIHDLYVMGEKWEEAAKL 378
+ Y L+ ++Y + +WE+ ++
Sbjct: 457 K-YYHLLMNIYSVTGRWEDVNRV 478
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 158 bits (400), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 99/296 (33%), Positives = 165/296 (55%), Gaps = 6/296 (2%)
Query: 82 NTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVL 141
NT +I YS+ GD++ AR FE P++ +V+ +++I+ Y G S++ L L +
Sbjct: 258 NTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALHGYSEEALCLLYD-M 316
Query: 142 LFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGG 201
G+ DQ T ++ + L L K H +++NG+E LV+ Y+K G
Sbjct: 317 RDSGVSIDQFTLSIMIRISTKLAKLELT--KQAHASLIRNGFESEIVANTALVDFYSKWG 374
Query: 202 VLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLS 261
+ A VF+ + +N++SW AL+ G A G +A+ +FEKM A V PN +TF VLS
Sbjct: 375 RVDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLS 434
Query: 262 ACAHAGLVEEGRRYF-KMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNV 320
ACA++GL E+G F M E +G++P+ HYA ++ L+G+ G L+EA I+ ++ V
Sbjct: 435 ACAYSGLSEQGWEIFLSMSEVHGIKPRAMHYACMIELLGRDGLLDEAIAFIRRAPLKTTV 494
Query: 321 VVFGSFLSACKEHKQFEMAERVIEQVLRMVKPEDDRGIYRLIHDLYVMGEKWEEAA 376
++ + L+AC+ + E+ RV+ + L + PE G Y +++++Y K EAA
Sbjct: 495 NMWAALLNACRMQENLELG-RVVAEKLYGMGPE-KLGNYVVMYNMYNSMGKTAEAA 548
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 130/262 (49%), Gaps = 6/262 (2%)
Query: 87 NTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGI 146
N +++ + + G + AR +F+E P+R+ S S+IS + N G+ + LF+ +++E +
Sbjct: 162 NRILLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFELFK--MMWEEL 219
Query: 147 KPDQV-TAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRN 205
+ T +L A +GS+ GK +H +K G N + L++MY+K G + +
Sbjct: 220 SDCETHTFAVMLRASAGLGSI--YVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIED 277
Query: 206 AAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAH 265
A FE M E+ ++W +I G A G+ EEAL + MR +GV ++ T + ++
Sbjct: 278 ARCAFECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTK 337
Query: 266 AGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGS 325
+E ++ + G E ++ +LV K GR++ A + + N++ + +
Sbjct: 338 LAKLELTKQAHASLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDKLP-RKNIISWNA 396
Query: 326 FLSACKEHKQFEMAERVIEQVL 347
+ H + A ++ E+++
Sbjct: 397 LMGGYANHGRGTDAVKLFEKMI 418
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/315 (22%), Positives = 134/315 (42%), Gaps = 73/315 (23%)
Query: 3 LYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLLNA 62
L + +GV D F + ++ ++ L L + + HA +I+ GF + + L++
Sbjct: 312 LLYDMRDSGVSIDQFTLSIMIR-ISTKLAKLELTKQAHASLIRNGF-ESEIVANTALVDF 369
Query: 63 YVLLSFLD-ACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMI 121
Y +D A +FD++P +N ++WN ++ GY+ G A ++FE+ MI
Sbjct: 370 YSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEK-----------MI 418
Query: 122 SAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKN 181
+A + P+ VT AVLS CA+ G + +
Sbjct: 419 AA---------------------NVAPNHVTFLAVLSACAYSG-------------LSEQ 444
Query: 182 GWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVF 241
GWE+ ++M G+ + AM + M+E + G +EA+
Sbjct: 445 GWEI-------FLSMSEVHGI-KPRAMHYACMIEL-----------LGRDGLLDEAIAF- 484
Query: 242 EKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEP-KVHHYASLVYLVGK 300
+R A ++ + +L+AC +E GR + + YGM P K+ +Y + +
Sbjct: 485 --IRRAPLKTTVNMWAALLNACRMQENLELGRVVAEKL--YGMGPEKLGNYVVMYNMYNS 540
Query: 301 SGRLEEAYEIIKTMK 315
G+ EA +++T++
Sbjct: 541 MGKTAEAAGVLETLE 555
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 88/196 (44%), Gaps = 2/196 (1%)
Query: 112 RDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAG 171
+ V++ S I ++ LF + + K T A++ C + S+ +
Sbjct: 85 KSGVTICSQIEKLVLCNRFREAFELFEILEIRCSFKVGVSTYDALVEACIRLKSIRCV-- 142
Query: 172 KSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQW 231
K V+GF++ NG+E + ++ M+ K G++ +A +F+ + ERN+ S+ ++I G +
Sbjct: 143 KRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGFVNF 202
Query: 232 GFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHY 291
G EA +F+ M TF +L A A G + G++ G+
Sbjct: 203 GNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTFVS 262
Query: 292 ASLVYLVGKSGRLEEA 307
L+ + K G +E+A
Sbjct: 263 CGLIDMYSKCGDIEDA 278
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 157 bits (398), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 103/366 (28%), Positives = 188/366 (51%), Gaps = 44/366 (12%)
Query: 15 DSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLLNAYVLLSFLDACIL 74
D+ FTLK+C L S + + LH I + G +
Sbjct: 108 DALTCSFTLKACARALCS-SAMDQLHCQINRRGLSA------------------------ 142
Query: 75 FDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGL 134
+++ T++ YS++GD+ A ++F+E P RD S +++I+ + + + +
Sbjct: 143 -------DSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEAM 195
Query: 135 SLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSV-HGFIVKNGWELNAELGATL 193
L++R + EGI+ +VT A L C+H+G + G+++ HG+ N NA
Sbjct: 196 ELYKR-METEGIRRSEVTVVAALGACSHLGDVK--EGENIFHGYSNDNVIVSNAA----- 247
Query: 194 VNMYAKGGVLRNAAMVFELMV-ERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPN 252
++MY+K G + A VFE +++V++W +I G A G AL +F+K+ G++P+
Sbjct: 248 IDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPD 307
Query: 253 ELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIK 312
++++ L+AC HAGLVE G F + G+E + HY +V L+ ++GRL EA++II
Sbjct: 308 DVSYLAALTACRHAGLVEYGLSVFNNMACKGVERNMKHYGCVVDLLSRAGRLREAHDIIC 367
Query: 313 TMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPEDDRGIYRLIHDLYVMGEKW 372
+M + P+ V++ S L A + + EMAE ++ M D G + L+ ++Y +W
Sbjct: 368 SMSMIPDPVLWQSLLGASEIYSDVEMAEIASREIKEMGVNND--GDFVLLSNVYAAQGRW 425
Query: 373 EEAAKL 378
++ ++
Sbjct: 426 KDVGRV 431
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 146/328 (44%), Gaps = 39/328 (11%)
Query: 32 SLTIIQHLHAHIIKLG-FAPTHLH---VANCLLNAYVLLSFLDACILFDEMPNRNTVTWN 87
S + I+ L +H + G F + L + C ++ + LSF A +F +P T WN
Sbjct: 15 SFSQIKQLQSHFLTAGHFQSSFLRSRLLERCAISPFGDLSF--AVQIFRYIPKPLTNDWN 72
Query: 88 TMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIK 147
+I G++ S A S Y ++ S RV
Sbjct: 73 AIIRGFAGSSHPSLA------------------FSWYRSMLQQSSSSSAICRV------- 107
Query: 148 PDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAA 207
D +T L CA +L A +H I + G ++ L TL++ Y+K G L +A
Sbjct: 108 -DALTCSFTLKACAR--ALCSSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAY 164
Query: 208 MVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAG 267
+F+ M R+V SW ALI G EA+ ++++M G+R +E+T L AC+H G
Sbjct: 165 KLFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLG 224
Query: 268 LVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFL 327
V+EG F Y + + A+ + + K G +++AY++ + + +VV + + +
Sbjct: 225 DVKEGENIF---HGYSNDNVIVSNAA-IDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMI 280
Query: 328 SACKEHKQFEMAERVIEQVLRM-VKPED 354
+ H + A + +++ +KP+D
Sbjct: 281 TGFAVHGEAHRALEIFDKLEDNGIKPDD 308
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 134/316 (42%), Gaps = 49/316 (15%)
Query: 1 MHLYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLL 60
M LY ++ G+ +V L +C SHL + I G++ ++ V+N +
Sbjct: 195 MELYKRMETEGIRRSEVTVVAALGAC-SHLGDVK-----EGENIFHGYSNDNVIVSNAAI 248
Query: 61 NAYVLLSFLD-ACILFDEMPNRNTV-TWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLS 118
+ Y F+D A +F++ + +V TWNTMI G++ G+ RA E+F++
Sbjct: 249 DMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDK---------- 298
Query: 119 SMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFI 178
L GIKPD V+ A L+ C H G + G SV +
Sbjct: 299 ----------------------LEDNGIKPDDVSYLAALTACRHAGLVEY--GLSVFNNM 334
Query: 179 VKNGWELNAELGATLVNMYAKGGVLRNA-AMVFELMVERNVLSWTALICGAAQWGFCEEA 237
G E N + +V++ ++ G LR A ++ + + + + W +L+ + + E A
Sbjct: 335 ACKGVERNMKHYGCVVDLLSRAGRLREAHDIICSMSMIPDPVLWQSLLGASEIYSDVEMA 394
Query: 238 LVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYL 297
+ +++ GV N+ F + + A G ++ R + D +V L Y+
Sbjct: 395 EIASREIKEMGVN-NDGDFVLLSNVYAAQGRWKDVGR----VRDDMESKQVKKIPGLSYI 449
Query: 298 VGKSGRLEEAYEIIKT 313
K G + E Y K+
Sbjct: 450 EAK-GTIHEFYNSDKS 464
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 157 bits (397), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 90/288 (31%), Positives = 162/288 (56%), Gaps = 13/288 (4%)
Query: 82 NTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVL 141
N V ++++ Y + G V+ AR+VF +++SVS S+++ Y G ++ + +FR
Sbjct: 299 NVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFR--- 355
Query: 142 LFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGG 201
E + D G VL CA + ++ L GK +HG V+ G N + + L+++Y K G
Sbjct: 356 --EMEEKDLYCFGTVLKACAGLAAVRL--GKEIHGQYVRRGCFGNVIVESALIDLYGKSG 411
Query: 202 VLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLS 261
+ +A+ V+ M RN+++W A++ AQ G EEA+ F M G++P+ ++F +L+
Sbjct: 412 CIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILT 471
Query: 262 ACAHAGLVEEGRRYFK-MIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNV 320
AC H G+V+EGR YF M + YG++P HY+ ++ L+G++G EEA +++ + +
Sbjct: 472 ACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLERAECRNDA 531
Query: 321 VVFGSFLSACKEHKQFEMAERVIEQVL-RMVKPEDDRGI-YRLIHDLY 366
++G L C + A RV E++ RM++ E + Y L+ ++Y
Sbjct: 532 SLWGVLLGPCAANAD---ASRVAERIAKRMMELEPKYHMSYVLLSNMY 576
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 77/253 (30%), Positives = 132/253 (52%), Gaps = 8/253 (3%)
Query: 102 AREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCA 161
AR VF+E P+ D + ++++SA++ ++ L LF + +G+ PD T G VL+ C
Sbjct: 217 ARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACG 276
Query: 162 HMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSW 221
++ L GK +HG ++ NG N + ++L++MY K G +R A VF M ++N +SW
Sbjct: 277 NLRRLK--QGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSW 334
Query: 222 TALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIED 281
+AL+ G Q G E+A+ +F +M + F VL ACA V G+
Sbjct: 335 SALLGGYCQNGEHEKAIEIFREME----EKDLYCFGTVLKACAGLAAVRLGKEIHGQYVR 390
Query: 282 YGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAER 341
G V ++L+ L GKSG ++ A + M + N++ + + LSA ++ + E A
Sbjct: 391 RGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIR-NMITWNAMLSALAQNGRGEEAVS 449
Query: 342 VI-EQVLRMVKPE 353
+ V + +KP+
Sbjct: 450 FFNDMVKKGIKPD 462
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 85/347 (24%), Positives = 159/347 (45%), Gaps = 36/347 (10%)
Query: 1 MHLYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLL 60
+ + + H + +P L++C + IQ HAH++K G T +V N LL
Sbjct: 46 IRILNSTHSSEIPATPKLYASLLQTCNKVFSFIHGIQ-FHAHVVKSGL-ETDRNVGNSLL 103
Query: 61 NAYVLLSFLDACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSM 120
+ Y L P ++ R VF+ +D++S +SM
Sbjct: 104 SLYFKLG-----------PG------------------MRETRRVFDGRFVKDAISWTSM 134
Query: 121 ISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVK 180
+S Y + L +F ++ F G+ ++ T + + C+ +G + L G+ HG ++
Sbjct: 135 MSGYVTGKEHVKALEVFVEMVSF-GLDANEFTLSSAVKACSELGEVRL--GRCFHGVVIT 191
Query: 181 NGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVV 240
+G+E N + +TL +Y +A VF+ M E +V+ WTA++ ++ EEAL +
Sbjct: 192 HGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGL 251
Query: 241 FEKM-RVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVG 299
F M R G+ P+ TF VL+AC + +++G+ + G+ V +SL+ + G
Sbjct: 252 FYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYG 311
Query: 300 KSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQV 346
K G + EA ++ M + N V + + L ++ + E A + ++
Sbjct: 312 KCGSVREARQVFNGMS-KKNSVSWSALLGGYCQNGEHEKAIEIFREM 357
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 156 bits (395), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 104/379 (27%), Positives = 199/379 (52%), Gaps = 39/379 (10%)
Query: 1 MHLYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLL 60
+ L+ + + + D + L++ +S L S+ I++ +H HI++ G
Sbjct: 472 LELFRDVAKKRMEIDEMILGSILRA-SSVLKSMLIVKEIHCHILRKGLL----------- 519
Query: 61 NAYVLLSFLDACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSM 120
+TV N ++ Y + ++ A VFE +D VS +SM
Sbjct: 520 ---------------------DTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSM 558
Query: 121 ISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVK 180
IS+ G+ + + LFRR ++ G+ D V +LS A + +L G+ +H ++++
Sbjct: 559 ISSSALNGNESEAVELFRR-MVETGLSADSVALLCILSAAASLSALN--KGREIHCYLLR 615
Query: 181 NGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVV 240
G+ L + +V+MYA G L++A VF+ + + +L +T++I G + A+ +
Sbjct: 616 KGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVEL 675
Query: 241 FEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIE-DYGMEPKVHHYASLVYLVG 299
F+KMR V P+ ++F +L AC+HAGL++EGR + K++E +Y +EP HY LV ++G
Sbjct: 676 FDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLG 735
Query: 300 KSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPEDDRGIY 359
++ + EA+E +K MK EP V+ + L+AC+ H + E+ E +++L + +P++ G
Sbjct: 736 RANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLEL-EPKNP-GNL 793
Query: 360 RLIHDLYVMGEKWEEAAKL 378
L+ +++ +W + K+
Sbjct: 794 VLVSNVFAEQGRWNDVEKV 812
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 128/263 (48%), Gaps = 36/263 (13%)
Query: 1 MHLYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLL 60
+ L+ ++H TG +S+ IV L +C ++ + + +HA ++K + L+V N L+
Sbjct: 269 LELFREMHMTGPAPNSYTIVSALTACDGFSYA-KLGKEIHASVLKSSTHSSELYVCNALI 327
Query: 61 NAYVLLSFL-DACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSS 119
Y + A + +M N + VTWN++I GY ++ + A E F S
Sbjct: 328 AMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFF-----------SD 376
Query: 120 MISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIV 179
MI+A G K D+V+ ++++ + +L LAG +H +++
Sbjct: 377 MIAA---------------------GHKSDEVSMTSIIAASGRLSNL--LAGMELHAYVI 413
Query: 180 KNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALV 239
K+GW+ N ++G TL++MY+K + F M +++++SWT +I G AQ EAL
Sbjct: 414 KHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALE 473
Query: 240 VFEKMRVAGVRPNELTFTGVLSA 262
+F + + +E+ +L A
Sbjct: 474 LFRDVAKKRMEIDEMILGSILRA 496
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 118/241 (48%), Gaps = 6/241 (2%)
Query: 89 MIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKP 148
++ Y + G + A +VF+E P R + + ++MI AY + G L+L+ + + EG+
Sbjct: 122 LVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRV-EGVPL 180
Query: 149 DQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAM 208
+ A+L CA + + +G +H +VK G+ + LV+MYAK L A
Sbjct: 181 GLSSFPALLKACAKLRDIR--SGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARR 238
Query: 209 VFELMVER-NVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAG 267
+F+ E+ + + W +++ + G E L +F +M + G PN T L+AC
Sbjct: 239 LFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFS 298
Query: 268 LVEEGRR-YFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSF 326
+ G+ + +++ +++ +L+ + + G++ +A I++ M +VV + S
Sbjct: 299 YAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMN-NADVVTWNSL 357
Query: 327 L 327
+
Sbjct: 358 I 358
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 120/265 (45%), Gaps = 39/265 (14%)
Query: 1 MHLYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLL 60
+ LY + GVP LK+C + L + LH+ ++KLG+ T V
Sbjct: 167 LALYWNMRVEGVPLGLSSFPALLKAC-AKLRDIRSGSELHSLLVKLGYHSTGFIV----- 220
Query: 61 NAYVLLSFLDACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQR-DSVSLSS 119
N ++ Y+++ D+ AR +F+ ++ D+V +S
Sbjct: 221 --------------------------NALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNS 254
Query: 120 MISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIV 179
++S+Y+ G S + L LFR + + G P+ T + L+ C L GK +H ++
Sbjct: 255 ILSSYSTSGKSLETLELFREMHM-TGPAPNSYTIVSALTACDGFSYAKL--GKEIHASVL 311
Query: 180 KNGWELNAELGA--TLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEA 237
K+ ++EL L+ MY + G + A + M +V++W +LI G Q +EA
Sbjct: 312 KSSTH-SSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEA 370
Query: 238 LVVFEKMRVAGVRPNELTFTGVLSA 262
L F M AG + +E++ T +++A
Sbjct: 371 LEFFSDMIAAGHKSDEVSMTSIIAA 395
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 85/195 (43%), Gaps = 6/195 (3%)
Query: 137 FRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKN--GWELNAELGATLV 194
F+R+ + E P + A VL C ++ G+ +H I K +EL+ L LV
Sbjct: 68 FQRLDVSENNSPVEAFA-YVLELCGKRRAVS--QGRQLHSRIFKTFPSFELDF-LAGKLV 123
Query: 195 NMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNEL 254
MY K G L +A VF+ M +R +W +I G AL ++ MRV GV
Sbjct: 124 FMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLS 183
Query: 255 TFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTM 314
+F +L ACA + G ++ G +LV + K+ L A +
Sbjct: 184 SFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGF 243
Query: 315 KVEPNVVVFGSFLSA 329
+ + + V++ S LS+
Sbjct: 244 QEKGDAVLWNSILSS 258
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 103/411 (25%), Positives = 202/411 (49%), Gaps = 39/411 (9%)
Query: 3 LYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLLNA 62
L+ +LHR+ V + F L +C + LH + +H+ ++KLG ++ V NCL++
Sbjct: 143 LFLELHRSDVFPNEFSFTAALAAC-ARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLIDM 201
Query: 63 YVLLSFLDACIL--------------------------------FDEMPNRNTVTWNTMI 90
Y F+D +L F +MPN +TVT+N +I
Sbjct: 202 YGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQMPNPDTVTYNELI 261
Query: 91 VGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQ 150
+ +SGD A +V + P +S S +++++ Y N S + F + + G++ D+
Sbjct: 262 DAFVKSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTK-MHSSGVRFDE 320
Query: 151 VTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVF 210
+ + A + G +H K G + + + L++MY+K G+L++A ++F
Sbjct: 321 YSLS--IVLAAVAALAVVPWGSLIHACAHKLGLDSRVVVASALIDMYSKCGMLKHAELMF 378
Query: 211 ELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAG-VRPNELTFTGVLSACAHAGL- 268
M +N++ W +I G A+ G EA+ +F +++ ++P+ TF +L+ C+H +
Sbjct: 379 WTMPRKNLIVWNEMISGYARNGDSIEAIKLFNQLKQERFLKPDRFTFLNLLAVCSHCEVP 438
Query: 269 VEEGRRYFKM-IEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFL 327
+E YF+M I +Y ++P V H SL+ +G+ G + +A ++I+ + V + + L
Sbjct: 439 MEVMLGYFEMMINEYRIKPSVEHCCSLIRAMGQRGEVWQAKQVIQEFGFGYDGVAWRALL 498
Query: 328 SACKEHKQFEMAERVIEQVLRMVKPEDDRGIYRLIHDLYVMGEKWEEAAKL 378
AC K + A+ V +++ + + D +Y ++ +LY E+W E ++
Sbjct: 499 GACSARKDLKAAKTVAAKMIELGDADKDEYLYIVMSNLYAYHERWREVGQI 549
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 131/286 (45%), Gaps = 49/286 (17%)
Query: 33 LTIIQHLHAHIIKLGFAPTHLHVANCLLNAYVLLSFL-DACILFDEMPNRNTVTWNTMIV 91
+++ + LH ++ K GF ++ ++N L+ Y L DA +FDEMP+ + ++WN+++
Sbjct: 71 VSLCRQLHGYVTKHGFV-SNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVS 129
Query: 92 GYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQV 151
GY +SG Q +F E + D + P++
Sbjct: 130 GYVQSGRFQEGICLFLELHRSD--------------------------------VFPNEF 157
Query: 152 TAGAVLSGCA--HMGSLGLLAGKSVHGFIVKNGWEL-NAELGATLVNMYAKGGVLRNAAM 208
+ A L+ CA H+ L G +H +VK G E N +G L++MY K G + +A +
Sbjct: 158 SFTAALAACARLHLSPL----GACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVL 213
Query: 209 VFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGL 268
VF+ M E++ +SW A++ ++ G E L F +M P+ +T+ ++ A +G
Sbjct: 214 VFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQMP----NPDTVTYNELIDAFVKSG- 268
Query: 269 VEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTM 314
+ F+++ D P + +++ S + EA E M
Sbjct: 269 --DFNNAFQVLSDMP-NPNSSSWNTILTGYVNSEKSGEATEFFTKM 311
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 123/257 (47%), Gaps = 15/257 (5%)
Query: 114 SVSLSSMISAYNNIGSSKQGLSLFRRV--LLFEGIKPDQVTAGAVLSGCAHMGSLGLLAG 171
S S S+++ A GS + + R L+ +G KPD +L + G + L
Sbjct: 21 SNSWSTIVPALARFGS----IGVLRAAVELINDGEKPDASPLVHLLRVSGNYGYVSLC-- 74
Query: 172 KSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQW 231
+ +HG++ K+G+ N L +L+ Y L +A VF+ M + +V+SW +L+ G Q
Sbjct: 75 RQLHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQS 134
Query: 232 GFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEP-KVHH 290
G +E + +F ++ + V PNE +FT L+ACA L G + G+E V
Sbjct: 135 GRFQEGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVV 194
Query: 291 YASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMV 350
L+ + GK G +++A + + M+ E + V + + +++C + + E+ Q+
Sbjct: 195 GNCLIDMYGKCGFMDDAVLVFQHME-EKDTVSWNAIVASCSRNGKLELGLWFFHQM---- 249
Query: 351 KPEDDRGIYRLIHDLYV 367
P D Y + D +V
Sbjct: 250 -PNPDTVTYNELIDAFV 265
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 155 bits (392), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 114/449 (25%), Positives = 208/449 (46%), Gaps = 78/449 (17%)
Query: 1 MHLYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLL 60
+ LY ++ + DS T+K+C S L L + + + G+ + V + +L
Sbjct: 101 LRLYDQMIAEKIQPDSSTFTMTIKACLSGL-VLEKGEAVWCKAVDFGY-KNDVFVCSSVL 158
Query: 61 NAYVLLSFLD-ACILFDEMPNRNTVTWNTMIVGYSRSGDVQRA----REVFEEAPQRDSV 115
N Y+ +D A +LF +M R+ + W TM+ G++++G +A RE+ E RD V
Sbjct: 159 NLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRV 218
Query: 116 SL-----------------------------------SSMISAYNNIGSSKQGLSLFRRV 140
+ +S++ Y +G + +F R+
Sbjct: 219 VMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRM 278
Query: 141 LL----------------------FE--------GIKPDQVTAGAVLSGCAHMGSLGLLA 170
+ FE G +PD VT VL C+ +GSL
Sbjct: 279 MFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLK--T 336
Query: 171 GKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQ 230
G+ VH +I+K L+ L++MY+K G L ++ +FE + ++++ W +I
Sbjct: 337 GRLVHCYILKRH-VLDRVTATALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMISCYGI 395
Query: 231 WGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFK-MIEDYGMEPKVH 289
G +E + +F KM + + P+ TF +LSA +H+GLVE+G+ +F MI Y ++P
Sbjct: 396 HGNGQEVVSLFLKMTESNIEPDHATFASLLSALSHSGLVEQGQHWFSVMINKYKIQPSEK 455
Query: 290 HYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRM 349
HY L+ L+ ++GR+EEA ++I + K++ + ++ + LS C H+ + + ++L++
Sbjct: 456 HYVCLIDLLARAGRVEEALDMINSEKLDNALPIWVALLSGCINHRNLSVGDIAANKILQL 515
Query: 350 VKPEDDRGIYRLIHDLYVMGEKWEEAAKL 378
D GI L+ + + KW+E AK+
Sbjct: 516 --NPDSIGIQTLVSNFFATANKWKEVAKV 542
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 127/261 (48%), Gaps = 7/261 (2%)
Query: 89 MIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKP 148
+I R G++ AR+VF+E PQR +SMI Y+ + + L L+ + ++ E I+P
Sbjct: 56 LIASCGRIGEISYARKVFDELPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQ-MIAEKIQP 114
Query: 149 DQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAM 208
D T + C + L L G++V V G++ + + ++++N+Y K G + A +
Sbjct: 115 DSSTFTMTIKAC--LSGLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEV 172
Query: 209 VFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGL 268
+F M +R+V+ WT ++ G AQ G +A+ + +M+ G + + G+L A G
Sbjct: 173 LFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGD 232
Query: 269 VEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLS 328
+ GR + G+ V SLV + K G +E A + M + V +GS +S
Sbjct: 233 TKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFK-TAVSWGSLIS 291
Query: 329 ACKEHKQFEMAERVIEQVLRM 349
Q +A + E V+ M
Sbjct: 292 G---FAQNGLANKAFEAVVEM 309
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 154 bits (388), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 110/368 (29%), Positives = 195/368 (52%), Gaps = 17/368 (4%)
Query: 20 VFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLLNAYV-LLSFLDACILFDEM 78
V + +C S L+ L + LH ++K F + V L++ Y + A I+F E+
Sbjct: 235 VNAITACASLLN-LQYGRQLHGLVMKKEFQFETM-VGTALIDMYSKCRCWKSAYIVFTEL 292
Query: 79 PN-RNTVTWNTMIVGYSRSGDVQRAREVFE----EAPQRDSVSLSSMISAYNNIGSSKQG 133
+ RN ++WN++I G +G + A E+FE E + DS + +S+IS ++ +G +
Sbjct: 293 KDTRNLISWNSVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEA 352
Query: 134 LSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATL 193
F R+L + P ++LS C+ + +L GK +HG ++K E + + +L
Sbjct: 353 FKFFERMLSVVMV-PSLKCLTSLLSACSDIWTLK--NGKEIHGHVIKAAAERDIFVLTSL 409
Query: 194 VNMYAKGGVLRNAAMVFELM--VERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRP 251
++MY K G+ A +F+ ++ + W +I G + G CE A+ +FE +R V P
Sbjct: 410 IDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMISGYGKHGECESAIEIFELLREEKVEP 469
Query: 252 NELTFTGVLSACAHAGLVEEGRRYFKMI-EDYGMEPKVHHYASLVYLVGKSGRLEEAYEI 310
+ TFT VLSAC+H G VE+G + F+++ E+YG +P H ++ L+G+SGRL EA E+
Sbjct: 470 SLATFTAVLSACSHCGNVEKGSQIFRLMQEEYGYKPSTEHIGCMIDLLGRSGRLREAKEV 529
Query: 311 IKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPEDDRGIYRLIHDLYVMGE 370
I M + V+ S L +C++H + E + L ++PE+ + ++ +Y E
Sbjct: 530 IDQMSEP-SSSVYSSLLGSCRQHLDPVLGEEAAMK-LAELEPENP-APFVILSSIYAALE 586
Query: 371 KWEEAAKL 378
+WE+ +
Sbjct: 587 RWEDVESI 594
Score = 98.2 bits (243), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 114/225 (50%), Gaps = 3/225 (1%)
Query: 87 NTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGI 146
+++ YSR G+ A +FE+ P + V+ ++ IS G S+F + F
Sbjct: 168 TSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLMENGVMNLVPSVFNLMRKFSSE 227
Query: 147 KPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNA 206
+P+ VT ++ CA + L L G+ +HG ++K ++ +G L++MY+K ++A
Sbjct: 228 EPNDVTFVNAITACASL--LNLQYGRQLHGLVMKKEFQFETMVGTALIDMYSKCRCWKSA 285
Query: 207 AMVF-ELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAH 265
+VF EL RN++SW ++I G G E A+ +FEK+ G++P+ T+ ++S +
Sbjct: 286 YIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQ 345
Query: 266 AGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEI 310
G V E ++F+ + M P + SL+ L+ EI
Sbjct: 346 LGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLKNGKEI 390
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 91/186 (48%), Gaps = 6/186 (3%)
Query: 148 PDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAA 207
P++ T +L CA +G + + G+ +H +VK G+ ++ LV+MY K + +A
Sbjct: 29 PNKFTFPPLLKSCAKLGDV--VQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDAL 86
Query: 208 MVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAG 267
V + M ER + S A + G + GFC +A +F RV+G N +T VL C G
Sbjct: 87 KVLDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGC---G 143
Query: 268 LVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFL 327
+E G + + G E +V+ SLV + + G A + + + +VV + +F+
Sbjct: 144 DIEGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVP-HKSVVTYNAFI 202
Query: 328 SACKEH 333
S E+
Sbjct: 203 SGLMEN 208
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 154 bits (388), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 91/298 (30%), Positives = 166/298 (55%), Gaps = 9/298 (3%)
Query: 79 PNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFR 138
P+ T+T +++ Y + G + AR+ F++ ++ +S SS+I Y G + + LF+
Sbjct: 244 PSSATIT-GSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFK 302
Query: 139 RVLLFEGIKPDQVTAGAVLSGCAHMGSLGLL-AGKSVHGFIVKNGWELNAELGATLVNMY 197
R+ Q+ + A+ S LL GK + VK L + ++V+MY
Sbjct: 303 RLQELN----SQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMY 358
Query: 198 AKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFT 257
K G++ A F M ++V+SWT +I G + G ++++ +F +M + P+E+ +
Sbjct: 359 LKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYL 418
Query: 258 GVLSACAHAGLVEEGRRYF-KMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKV 316
VLSAC+H+G+++EG F K++E +G++P+V HYA +V L+G++GRL+EA +I TM +
Sbjct: 419 AVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPI 478
Query: 317 EPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPEDDRGIYRLIHDLYVMGEKWEE 374
+PNV ++ + LS C+ H E+ + V + +LR+ + Y ++ +LY W E
Sbjct: 479 KPNVGIWQTLLSLCRVHGDIELGKEVGKILLRI--DAKNPANYVMMSNLYGQAGYWNE 534
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/269 (30%), Positives = 137/269 (50%), Gaps = 8/269 (2%)
Query: 72 CILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSK 131
C L N +T N +I Y + + A +VF+ P+R+ VS S+++S + G K
Sbjct: 30 CYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLK 89
Query: 132 QGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGA 191
LSLF + +GI P++ T L C + +L G +HGF +K G+E+ E+G
Sbjct: 90 GSLSLFSE-MGRQGIYPNEFTFSTNLKACGLLNALE--KGLQIHGFCLKIGFEMMVEVGN 146
Query: 192 TLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGV-- 249
+LV+MY+K G + A VF +V+R+++SW A+I G G+ +AL F M+ A +
Sbjct: 147 SLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKE 206
Query: 250 RPNELTFTGVLSACAHAGLVEEGRRY--FKMIEDYGMEPKVHHYASLVYLVGKSGRLEEA 307
RP+E T T +L AC+ G++ G++ F + + SLV L K G L A
Sbjct: 207 RPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSA 266
Query: 308 YEIIKTMKVEPNVVVFGSFLSACKEHKQF 336
+ +K E ++ + S + + +F
Sbjct: 267 RKAFDQIK-EKTMISWSSLILGYAQEGEF 294
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 85/363 (23%), Positives = 179/363 (49%), Gaps = 49/363 (13%)
Query: 1 MHLYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLL 60
+ L+S++ R G+ + F LK+C L++L +H +K+GF + V N L+
Sbjct: 92 LSLFSEMGRQGIYPNEFTFSTNLKAC-GLLNALEKGLQIHGFCLKIGF-EMMVEVGNSLV 149
Query: 61 NAYVLLSFL-DACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVF---EEAPQRDSVS 116
+ Y + +A +F + +R+ ++WN MI G+ +G +A + F +EA ++
Sbjct: 150 DMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKE--- 206
Query: 117 LSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHG 176
+PD+ T ++L C+ G + AGK +HG
Sbjct: 207 ------------------------------RPDEFTLTSLLKACSSTGM--IYAGKQIHG 234
Query: 177 FIVKNGWEL--NAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFC 234
F+V++G+ +A + +LV++Y K G L +A F+ + E+ ++SW++LI G AQ G
Sbjct: 235 FLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEF 294
Query: 235 EEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDY--GMEPKVHHYA 292
EA+ +F++++ + + + ++ A L+ +G++ + G+E V +
Sbjct: 295 VEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSV 354
Query: 293 SLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLR-MVK 351
+YL K G ++EA + M+++ +V+ + ++ +H + + R+ ++LR ++
Sbjct: 355 VDMYL--KCGLVDEAEKCFAEMQLK-DVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIE 411
Query: 352 PED 354
P++
Sbjct: 412 PDE 414
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 75/144 (52%)
Query: 171 GKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQ 230
G VH +++K+G LN L++MY K A VF+ M ERNV+SW+AL+ G
Sbjct: 25 GGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVL 84
Query: 231 WGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHH 290
G + +L +F +M G+ PNE TF+ L AC +E+G + G E V
Sbjct: 85 NGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEV 144
Query: 291 YASLVYLVGKSGRLEEAYEIIKTM 314
SLV + K GR+ EA ++ + +
Sbjct: 145 GNSLVDMYSKCGRINEAEKVFRRI 168
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 154 bits (388), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 96/335 (28%), Positives = 182/335 (54%), Gaps = 11/335 (3%)
Query: 59 LLNAYVLLSFLDACILFDEMPNRNTVTWNTMIVG-----YSRSGDVQRAREVFEEA-PQR 112
+L++ L FL+ + R ++ N+ IV YS ++ + +F++ +
Sbjct: 422 ILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINEL 481
Query: 113 DSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGK 172
D +SMIS + + + L LFRR+ + P++ + VLS C+ + SL L G+
Sbjct: 482 DIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSL--LHGR 539
Query: 173 SVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWG 232
HG +VK+G+ ++ + L +MY K G + +A F+ ++ +N + W +I G G
Sbjct: 540 QFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNG 599
Query: 233 FCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIED-YGMEPKVHHY 291
+EA+ ++ KM +G +P+ +TF VL+AC+H+GLVE G ++ +G+EP++ HY
Sbjct: 600 RGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHGIEPELDHY 659
Query: 292 ASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVK 351
+V +G++GRLE+A ++ + + + V++ LS+C+ H +A RV E+++R+
Sbjct: 660 ICIVDCLGRAGRLEDAEKLAEATPYKSSSVLWEILLSSCRVHGDVSLARRVAEKLMRL-D 718
Query: 352 PEDDRGIYRLIHDLYVMGEKWEEAAKLGPGFDFNR 386
P+ Y L+ + Y +W+++A L + NR
Sbjct: 719 PQSS-AAYVLLSNTYSSLRQWDDSAALQGLMNKNR 752
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 74/228 (32%), Positives = 125/228 (54%), Gaps = 6/228 (2%)
Query: 39 LHAHIIKLGFAPTHLHVANCLLNAYVLLSFLD-ACILFDEMPNRNTVTWNTMIVGYSRSG 97
+H I+++G + ++ N LL+ Y+ D A +FDEM R+ +WN + + G
Sbjct: 28 IHGFIVRMGM-KSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCKVG 86
Query: 98 DVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVL 157
D+ A EVF+ P+RD VS ++MIS G ++ L +++R ++ +G P + T +VL
Sbjct: 87 DLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKR-MVCDGFLPSRFTLASVL 145
Query: 158 SGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGG-VLRNAAMVFELMVER 216
S C+ + L + G HG VK G + N +G L++MYAK G ++ VFE + +
Sbjct: 146 SACSKV--LDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQP 203
Query: 217 NVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACA 264
N +S+TA+I G A+ EA+ +F M GV+ + + + +LS A
Sbjct: 204 NEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISA 251
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 133/280 (47%), Gaps = 16/280 (5%)
Query: 80 NRNTVTWNTMIVGYSRSG-DVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFR 138
++N N ++ Y++ G V VFE Q + VS +++I + + +FR
Sbjct: 170 DKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFR 229
Query: 139 RVLLFEGIKPDQVTAGAVLS------GCAHMGSL-GLLAGKSVHGFIVKNGWELNAELGA 191
++ +G++ D V +LS GC + + G GK +H ++ G+ + L
Sbjct: 230 -LMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNN 288
Query: 192 TLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRP 251
+L+ +YAK + A ++F M E NV+SW +I G Q ++++ +MR +G +P
Sbjct: 289 SLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQP 348
Query: 252 NELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEII 311
NE+T VL AC +G VE GRR F I +P V + +++ EEA
Sbjct: 349 NEVTCISVLGACFRSGDVETGRRIFSSIP----QPSVSAWNAMLSGYSNYEHYEEAISNF 404
Query: 312 KTMK---VEPNVVVFGSFLSACKEHKQFEMAERVIEQVLR 348
+ M+ ++P+ LS+C + E +++ V+R
Sbjct: 405 RQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIR 444
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 92/205 (44%), Gaps = 34/205 (16%)
Query: 169 LAGKSVHGFIVKNGWELNAELGATLVNMY------------------------------- 197
L+GK +HGFIV+ G + + L L+++Y
Sbjct: 23 LSGKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFR 82
Query: 198 AKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFT 257
K G L A VF+ M ER+V+SW +I + GF E+ALVV+++M G P+ T
Sbjct: 83 CKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLA 142
Query: 258 GVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRL-EEAYEIIKTMKV 316
VLSAC+ G R + G++ + +L+ + K G + + + +++
Sbjct: 143 SVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLS- 201
Query: 317 EPNVVVFGSFLSA-CKEHKQFEMAE 340
+PN V + + + +E+K E +
Sbjct: 202 QPNEVSYTAVIGGLARENKVLEAVQ 226
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/337 (18%), Positives = 131/337 (38%), Gaps = 77/337 (22%)
Query: 1 MHLYSKLHRTGVPFDSFCI--VFTLKSCTSHLHSLTII------QHLHAHIIKLGFAPTH 52
+ ++ + GV DS C+ + ++ + SL+ I + +H ++LGF
Sbjct: 225 VQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYGNELGKQIHCLALRLGFGG-D 283
Query: 53 LHVANCLLNAYVLLSFLDACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQR 112
LH+ N LL Y +++ D+ A +F E P+
Sbjct: 284 LHLNNSLLEIY------------------------------AKNKDMNGAELIFAEMPEV 313
Query: 113 DSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGK 172
+ VS + MI + S + + R + G +P++VT +VL C
Sbjct: 314 NVVSWNIMIVGFGQEYRSDKSVEFLTR-MRDSGFQPNEVTCISVLGACF----------- 361
Query: 173 SVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWG 232
+ G + +F + + +V +W A++ G + +
Sbjct: 362 --------------------------RSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYE 395
Query: 233 FCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYA 292
EEA+ F +M+ ++P++ T + +LS+CA +E G++ ++ + H +
Sbjct: 396 HYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVS 455
Query: 293 SLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSA 329
L+ + + ++E + I E ++ + S +S
Sbjct: 456 GLIAVYSECEKMEISECIFDDCINELDIACWNSMISG 492
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 71/152 (46%), Gaps = 6/152 (3%)
Query: 3 LYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLLNA 62
L+ ++H+T V + T+ S S L SL + H ++K G+ V L +
Sbjct: 505 LFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSF-VETALTDM 563
Query: 63 YVLLSFLDAC-ILFDEMPNRNTVTWNTMIVGYSRSGDVQRA----REVFEEAPQRDSVSL 117
Y +D+ FD + +NTV WN MI GY +G A R++ + D ++
Sbjct: 564 YCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITF 623
Query: 118 SSMISAYNNIGSSKQGLSLFRRVLLFEGIKPD 149
S+++A ++ G + GL + + GI+P+
Sbjct: 624 VSVLTACSHSGLVETGLEILSSMQRIHGIEPE 655
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 154 bits (388), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 89/292 (30%), Positives = 166/292 (56%), Gaps = 7/292 (2%)
Query: 87 NTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGI 146
N +I YS+ + +A ++F P+++ +S +S+I+ + L R++ + +
Sbjct: 437 NNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMKM--TL 494
Query: 147 KPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNA 206
+P+ +T A L+ CA +G+L + GK +H +++ G L+ L L++MY + G + A
Sbjct: 495 QPNAITLTAALAACARIGAL--MCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTA 552
Query: 207 AMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHA 266
F +++V SW L+ G ++ G + +F++M + VRP+E+TF +L C+ +
Sbjct: 553 WSQFNSQ-KKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKS 611
Query: 267 GLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSF 326
+V +G YF +EDYG+ P + HYA +V L+G++G L+EA++ I+ M V P+ V+G+
Sbjct: 612 QMVRQGLMYFSKMEDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGAL 671
Query: 327 LSACKEHKQFEMAERVIEQVLRMVKPEDDRGIYRLIHDLYVMGEKWEEAAKL 378
L+AC+ H + ++ E + + + K G Y L+ +LY KW E AK+
Sbjct: 672 LNACRIHHKIDLGELSAQHIFELDKKS--VGYYILLCNLYADCGKWREVAKV 721
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 134/266 (50%), Gaps = 4/266 (1%)
Query: 87 NTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGI 146
N +I Y + GDV+ AR +F+ P+RD +S ++MIS Y G +GL LF + +
Sbjct: 235 NALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGL-SV 293
Query: 147 KPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNA 206
PD +T +V+S C +G L G+ +H +++ G+ ++ + +L MY G R A
Sbjct: 294 DPDLMTLTSVISACELLGDRRL--GRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREA 351
Query: 207 AMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHA 266
+F M ++++SWT +I G ++A+ + M V+P+E+T VLSACA
Sbjct: 352 EKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATL 411
Query: 267 GLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSF 326
G ++ G K+ + V +L+ + K +++A +I + NV+ + S
Sbjct: 412 GDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIP-RKNVISWTSI 470
Query: 327 LSACKEHKQFEMAERVIEQVLRMVKP 352
++ + + + A + Q+ ++P
Sbjct: 471 IAGLRLNNRCFEALIFLRQMKMTLQP 496
Score = 115 bits (287), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 121/243 (49%), Gaps = 3/243 (1%)
Query: 87 NTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGI 146
N + + R G++ A VF + +R+ S + ++ Y G + + L+ R+L G+
Sbjct: 133 NAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGV 192
Query: 147 KPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNA 206
KPD T VL C G L GK VH +V+ G+EL+ ++ L+ MY K G +++A
Sbjct: 193 KPDVYTFPCVLRTCG--GIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSA 250
Query: 207 AMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHA 266
++F+ M R+++SW A+I G + G C E L +F MR V P+ +T T V+SAC
Sbjct: 251 RLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELL 310
Query: 267 GLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSF 326
G GR + G + SL + +G EA ++ M+ ++V + +
Sbjct: 311 GDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRME-RKDIVSWTTM 369
Query: 327 LSA 329
+S
Sbjct: 370 ISG 372
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 101/242 (41%), Gaps = 34/242 (14%)
Query: 171 GKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQ 230
G V+ + + L ELG + M+ + G L +A VF M ERN+ SW L+ G A+
Sbjct: 113 GSKVYSIALSSMSSLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAK 172
Query: 231 WGFCEEALVVFEKMR-VAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVH 289
G+ +EA+ ++ +M V GV+P+ TF VL C + G+ + YG E +
Sbjct: 173 QGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDID 232
Query: 290 HYASLVYLVGKSGRLEEAYEIIKTMK----VEPNVVVFGSFLSA-CKEHKQFEMAER--- 341
+L+ + K G ++ A + M + N ++ G F + C E + A R
Sbjct: 233 VVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLS 292
Query: 342 ------VIEQVLRMVKPEDDRGIYRLIH-------------------DLYVMGEKWEEAA 376
+ V+ + DR + R IH +Y+ W EA
Sbjct: 293 VDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAE 352
Query: 377 KL 378
KL
Sbjct: 353 KL 354
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 152 bits (385), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 99/350 (28%), Positives = 182/350 (52%), Gaps = 45/350 (12%)
Query: 33 LTIIQHLHAHIIKLGFAPTHLHVANCLLNAYVLLSFLDACILFDEMPNRNTVTWNTMIVG 92
L I+ LH IKLGF + + + L+NAYV
Sbjct: 230 LEIVSELHGLAIKLGFGRSSALIRS-LVNAYV---------------------------- 260
Query: 93 YSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGS-SKQGLSLFRRVLLFEGIKPDQV 151
+ G + A ++ E +RD +S +++I+ ++ + + +F+ ++ + K D+V
Sbjct: 261 --KCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMK-TKMDEV 317
Query: 152 TAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGW-ELNAELGATLVNMYAKGGVLRNAAMVF 210
++L C + S+ + G+ +HGF +K+ + LG +L++MYAK G + +A + F
Sbjct: 318 VVSSMLKICTTIASVTI--GRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAF 375
Query: 211 ELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVE 270
E M E++V SWT+LI G + G E+A+ ++ +M ++PN++TF +LSAC+H G E
Sbjct: 376 EEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLSACSHTGQTE 435
Query: 271 EGRR-YFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMK--VEPNVVVFGSFL 327
G + Y MI +G+E + H + ++ ++ +SG LEEAY +I++ + V + +G+FL
Sbjct: 436 LGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEEAYALIRSKEGIVSLSSSTWGAFL 495
Query: 328 SACKEHKQFEMAERVIEQVLRM--VKPEDDRGIYRLIHDLYVMGEKWEEA 375
AC+ H ++++ Q+L M KP + Y + +Y W+ A
Sbjct: 496 DACRRHGNVQLSKVAATQLLSMEPRKPVN----YINLASVYAANGAWDNA 541
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 143/302 (47%), Gaps = 39/302 (12%)
Query: 82 NTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVL 141
N + + ++ Y+R G ++ AR F+ +RD VS ++MI Y + SLF+ ++
Sbjct: 147 NLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQ-LM 205
Query: 142 LFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGG 201
L EG KPD T G++L + L +++ +HG +K G+ ++ L +LVN Y K G
Sbjct: 206 LTEGKKPDCFTFGSLLRASIVVKCLEIVS--ELHGLAIKLGFGRSSALIRSLVNAYVKCG 263
Query: 202 VLRNAAMVFELMVERNVLSWTALICGAAQWGFC-EEALVVFEKMRVAGVRPNELTFTGVL 260
L NA + E +R++LS TALI G +Q C +A +F+ M + +E+ + +L
Sbjct: 264 SLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSML 323
Query: 261 SACAHAGLVEEGRR------------------------YFKM--IEDYGM------EPKV 288
C V GR+ Y K IED + E V
Sbjct: 324 KICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMKEKDV 383
Query: 289 HHYASLVYLVGKSGRLEEAYEIIKTM---KVEPNVVVFGSFLSACKEHKQFEMAERVIEQ 345
+ SL+ G+ G E+A ++ M +++PN V F S LSAC Q E+ ++ +
Sbjct: 384 RSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLSACSHTGQTELGWKIYDT 443
Query: 346 VL 347
++
Sbjct: 444 MI 445
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 96/176 (54%), Gaps = 3/176 (1%)
Query: 87 NTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGI 146
+ +I Y + GDV+ AR++F+ +RD VS ++MIS ++ G L LF+ + E +
Sbjct: 51 DMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGYHPDALLLFKE-MHREDV 109
Query: 147 KPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNA 206
K +Q T G+VL C +G L G +HG + K N + + L+++YA+ G + A
Sbjct: 110 KANQFTYGSVLKSCKDLGCLK--EGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEA 167
Query: 207 AMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSA 262
+ F+ M ER+++SW A+I G + + +F+ M G +P+ TF +L A
Sbjct: 168 RLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRA 223
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 92/163 (56%), Gaps = 4/163 (2%)
Query: 174 VHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGF 233
+HG + NG+ N +L L+++Y K G +++A +F+ + +R+V+SWTA+I ++ G+
Sbjct: 34 IHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGY 93
Query: 234 CEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYAS 293
+AL++F++M V+ N+ T+ VL +C G ++EG + +E + ++
Sbjct: 94 HPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSA 153
Query: 294 LVYLVGKSGRLEEAYEIIKTMK----VEPNVVVFGSFLSACKE 332
L+ L + G++EEA +MK V N ++ G +AC +
Sbjct: 154 LLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACAD 196
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 124/298 (41%), Gaps = 40/298 (13%)
Query: 3 LYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLLNA 62
++ + R D + LK CT+ + S+TI + +H +K + + N L++
Sbjct: 303 IFKDMIRMKTKMDEVVVSSMLKICTT-IASVTIGRQIHGFALKSSQIRFDVALGNSLIDM 361
Query: 63 YVLLSFL-DACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMI 121
Y + DA + F+EM ++ +W ++I GY R G+ ++A I
Sbjct: 362 YAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKA------------------I 403
Query: 122 SAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKN 181
YN + E IKP+ VT ++LS C+H G L K I K+
Sbjct: 404 DLYNRME--------------HERIKPNDVTFLSLLSACSHTGQTE-LGWKIYDTMINKH 448
Query: 182 GWELNAELGATLVNMYAKGGVLRNAAMVF---ELMVERNVLSWTALICGAAQWGFCEEAL 238
G E E + +++M A+ G L A + E +V + +W A + + G + +
Sbjct: 449 GIEAREEHLSCIIDMLARSGYLEEAYALIRSKEGIVSLSSSTWGAFLDACRRHGNVQLSK 508
Query: 239 VVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVY 296
V ++ R + + + S A G + K++++ G K Y SLVY
Sbjct: 509 VAATQLLSMEPRK-PVNYINLASVYAANGAWDNALNTRKLMKESGSCNKAPGY-SLVY 564
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 152 bits (383), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 95/293 (32%), Positives = 156/293 (53%), Gaps = 6/293 (2%)
Query: 87 NTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGI 146
N+M+ YS G++ A +F+ RD +S S++I Y G ++G F + G
Sbjct: 349 NSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSW-MRQSGT 407
Query: 147 KPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNA 206
KP ++LS +M + G+ VH + G E N+ + ++L+NMY+K G ++ A
Sbjct: 408 KPTDFALASLLSVSGNMAVIE--GGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEA 465
Query: 207 AMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHA 266
+M+F +++S TA+I G A+ G +EA+ +FEK G RP+ +TF VL+AC H+
Sbjct: 466 SMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHS 525
Query: 267 GLVEEGRRYFKMI-EDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGS 325
G ++ G YF M+ E Y M P HY +V L+ ++GRL +A ++I M + + VV+ +
Sbjct: 526 GQLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTT 585
Query: 326 FLSACKEHKQFEMAERVIEQVLRMVKPEDDRGIYRLIHDLYVMGEKWEEAAKL 378
L ACK E R E++L + P + L ++Y EEAA +
Sbjct: 586 LLIACKAKGDIERGRRAAERILEL-DPTCATALVTLA-NIYSSTGNLEEAANV 636
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/351 (25%), Positives = 166/351 (47%), Gaps = 37/351 (10%)
Query: 4 YSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLLNAY 63
+S++ R+ D++ LK+C L + + +H H+I GF T L VAN L
Sbjct: 197 FSEMSRSEELSDTYTFAIALKACAG-LRQVKYGKAIHTHVIVRGFVTT-LCVANSLA--- 251
Query: 64 VLLSFLDACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISA 123
TM Y+ G++Q +FE +RD VS +S+I A
Sbjct: 252 ------------------------TM---YTECGEMQDGLCLFENMSERDVVSWTSLIVA 284
Query: 124 YNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGW 183
Y IG + + F + + + P++ T ++ S CA + L + G+ +H ++ G
Sbjct: 285 YKRIGQEVKAVETFIK-MRNSQVPPNEQTFASMFSACASLSRL--VWGEQLHCNVLSLGL 341
Query: 184 ELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEK 243
+ + +++ MY+ G L +A+++F+ M R+++SW+ +I G Q GF EE F
Sbjct: 342 NDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSW 401
Query: 244 MRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGR 303
MR +G +P + +LS + ++E GR+ + +G+E +SL+ + K G
Sbjct: 402 MRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGS 461
Query: 304 LEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRM-VKPE 353
++EA I ++V + ++ EH + + A + E+ L++ +P+
Sbjct: 462 IKEASMIFGETD-RDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPD 511
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 111/223 (49%), Gaps = 3/223 (1%)
Query: 93 YSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVT 152
Y R G + ++ VF E P R++V+ +++I+ + G K+GL+ F + E + D T
Sbjct: 153 YKRVGKIDKSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEEL-SDTYT 211
Query: 153 AGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFEL 212
L CA + + GK++H ++ G+ + +L MY + G +++ +FE
Sbjct: 212 FAIALKACAGLRQVKY--GKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFEN 269
Query: 213 MVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEG 272
M ER+V+SWT+LI + G +A+ F KMR + V PNE TF + SACA + G
Sbjct: 270 MSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWG 329
Query: 273 RRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMK 315
+ + G+ + S++ + G L A + + M+
Sbjct: 330 EQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMR 372
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 123/255 (48%), Gaps = 7/255 (2%)
Query: 96 SGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFE-GIKPDQVTAG 154
+G+++ AR+VF++ P D VS +S+I Y +S + L LF + + + + PD
Sbjct: 53 AGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLS 112
Query: 155 AVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMV 214
VL C ++ G+S+H + VK + +G++L++MY + G + + VF M
Sbjct: 113 VVLKACGQSSNIAY--GESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMP 170
Query: 215 ERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRR 274
RN ++WTA+I G G +E L F +M + + TF L ACA V+ G+
Sbjct: 171 FRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKA 230
Query: 275 YFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHK 334
+ G + SL + + G +++ + + M E +VV + S + A +K
Sbjct: 231 IHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMS-ERDVVSWTSLIVA---YK 286
Query: 335 QFEMAERVIEQVLRM 349
+ + +E ++M
Sbjct: 287 RIGQEVKAVETFIKM 301
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 110/238 (46%), Gaps = 39/238 (16%)
Query: 81 RNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRV 140
+N+ +++I YS+ G ++ A +F E + D VSL++MI+ Y G SK+ + LF +
Sbjct: 444 QNSTVRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKS 503
Query: 141 LLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKG 200
L G +PD VT +VL+ C H G L +LG NM +
Sbjct: 504 LKV-GFRPDSVTFISVLTACTHSGQL---------------------DLGFHYFNMMQET 541
Query: 201 GVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVL 260
+R A + MV+ L+C A G +A + +M + +++ +T +L
Sbjct: 542 YNMRPAKEHYGCMVD--------LLCRA---GRLSDAEKMINEM---SWKKDDVVWTTLL 587
Query: 261 SACAHAGLVEEGRRYFKMIEDYGMEPK-VHHYASLVYLVGKSGRLEEAYEIIKTMKVE 317
AC G +E GRR + I + ++P +L + +G LEEA + K MK +
Sbjct: 588 IACKAKGDIERGRRAAERILE--LDPTCATALVTLANIYSSTGNLEEAANVRKNMKAK 643
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 152 bits (383), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 99/380 (26%), Positives = 196/380 (51%), Gaps = 39/380 (10%)
Query: 1 MHLYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLL 60
+ L+ ++H G D + + ++ S ++ L S++I Q +H + IK G
Sbjct: 76 LSLFREMHGLGFSPDEYTL-GSVFSGSAGLRSVSIGQQIHGYTIKYGL------------ 122
Query: 61 NAYVLLSFLDACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSM 120
+ V +++ Y R+G +Q V P R+ V+ +++
Sbjct: 123 -------------------ELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTL 163
Query: 121 ISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVK 180
I G + L L++ ++ G +P+++T VLS C+ + G G+ +H +K
Sbjct: 164 IMGNAQNGCPETVLYLYK-MMKISGCRPNKITFVTVLSSCSDLAIRG--QGQQIHAEAIK 220
Query: 181 NGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVV 240
G + ++L++MY+K G L +AA F + + + W+++I G +EA+ +
Sbjct: 221 IGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIEL 280
Query: 241 FEKM-RVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKM-IEDYGMEPKVHHYASLVYLV 298
F M + NE+ F +L AC+H+GL ++G F M +E YG +P + HY +V L+
Sbjct: 281 FNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLL 340
Query: 299 GKSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPEDDRGI 358
G++G L++A II++M ++ ++V++ + LSAC HK EMA+RV +++L+ + P +D
Sbjct: 341 GRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQ-IDP-NDSAC 398
Query: 359 YRLIHDLYVMGEKWEEAAKL 378
Y L+ +++ ++W + +++
Sbjct: 399 YVLLANVHASAKRWRDVSEV 418
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 89/275 (32%), Positives = 155/275 (56%), Gaps = 4/275 (1%)
Query: 65 LLSFLDACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAY 124
L F A ++ M +N ++ N +I GY R+GD+ AR+VF+E P R + ++MI+
Sbjct: 7 LGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGL 66
Query: 125 NNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWE 184
+++GLSLFR + G PD+ T G+V SG A + S+ + G+ +HG+ +K G E
Sbjct: 67 IQFEFNEEGLSLFREMHGL-GFSPDEYTLGSVFSGSAGLRSVSI--GQQIHGYTIKYGLE 123
Query: 185 LNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKM 244
L+ + ++L +MY + G L++ +V M RN+++W LI G AQ G E L +++ M
Sbjct: 124 LDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMM 183
Query: 245 RVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRL 304
+++G RPN++TF VLS+C+ + +G++ G V +SL+ + K G L
Sbjct: 184 KISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCL 243
Query: 305 EEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMA 339
+A + + + + + V++ S +SA H Q + A
Sbjct: 244 GDAAKAF-SEREDEDEVMWSSMISAYGFHGQGDEA 277
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 151 bits (382), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 90/293 (30%), Positives = 159/293 (54%), Gaps = 5/293 (1%)
Query: 87 NTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGI 146
N+ I Y++ ++ A++ FE+ R+ +S ++MIS + G S + L +F
Sbjct: 411 NSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSAA--AET 468
Query: 147 KPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNA 206
P++ T G+VL+ A + + G+ H ++K G + + L++MYAK G + +
Sbjct: 469 MPNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDES 528
Query: 207 AMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHA 266
VF M ++N WT++I + G E + +F KM V P+ +TF VL+AC
Sbjct: 529 EKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRK 588
Query: 267 GLVEEGRRYFK-MIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGS 325
G+V++G F MIE Y +EP HY+ +V ++G++GRL+EA E++ + P + S
Sbjct: 589 GMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEVPGGPGESMLQS 648
Query: 326 FLSACKEHKQFEMAERVIEQVLRMVKPEDDRGIYRLIHDLYVMGEKWEEAAKL 378
L +C+ H +M +V E + M KPE G Y ++++Y E+W++AA++
Sbjct: 649 MLGSCRLHGNVKMGAKVAELAMEM-KPELS-GSYVQMYNIYAEKEEWDKAAEI 699
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/233 (34%), Positives = 125/233 (53%), Gaps = 21/233 (9%)
Query: 82 NTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVL 141
+ V N+ I YSRSG + AR VF+E +D +S +S++S G S++G F V+
Sbjct: 208 DLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLS-----GLSQEGTFGFEAVV 262
Query: 142 LF-----EGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNM 196
+F EG++ D V+ +V++ C H L L + +HG +K G+E E+G L++
Sbjct: 263 IFRDMMREGVELDHVSFTSVITTCCHETDLKL--ARQIHGLCIKRGYESLLEVGNILMSR 320
Query: 197 YAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTF 256
Y+K GVL VF M ERNV+SWT +I ++A+ +F MR GV PNE+TF
Sbjct: 321 YSKCGVLEAVKSVFHQMSERNVVSWTTMISSNK-----DDAVSIFLNMRFDGVYPNEVTF 375
Query: 257 TGVLSACAHAGLVEEGRRYFKMIEDYGM--EPKVHHYASLVYLVGKSGRLEEA 307
G+++A ++EG + + G EP V + S + L K LE+A
Sbjct: 376 VGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGN--SFITLYAKFEALEDA 426
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 90/350 (25%), Positives = 159/350 (45%), Gaps = 48/350 (13%)
Query: 3 LYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLLNA 62
++ + R GV D + +C H L + + +H IK G+ + L V N L++
Sbjct: 263 IFRDMMREGVELDHVSFTSVITTCC-HETDLKLARQIHGLCIKRGY-ESLLEVGNILMSR 320
Query: 63 YVLLSFLDACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMIS 122
Y S+ G ++ + VF + +R+ VS ++MIS
Sbjct: 321 Y------------------------------SKCGVLEAVKSVFHQMSERNVVSWTTMIS 350
Query: 123 AYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSG--CAHMGSLGLLAGKSVHGFIVK 180
+ + +S+F + F+G+ P++VT +++ C GL +HG +K
Sbjct: 351 S-----NKDDAVSIFLN-MRFDGVYPNEVTFVGLINAVKCNEQIKEGL----KIHGLCIK 400
Query: 181 NGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVV 240
G+ +G + + +YAK L +A FE + R ++SW A+I G AQ GF EAL +
Sbjct: 401 TGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKM 460
Query: 241 FEKMRVAGVRPNELTFTGVLSACAHAG--LVEEGRRYFKMIEDYGMEPKVHHYASLVYLV 298
F A PNE TF VL+A A A V++G+R + G+ ++L+ +
Sbjct: 461 FLSA-AAETMPNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVSSALLDMY 519
Query: 299 GKSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLR 348
K G ++E+ ++ M + N V+ S +SA H FE + ++++
Sbjct: 520 AKRGNIDESEKVFNEMS-QKNQFVWTSIISAYSSHGDFETVMNLFHKMIK 568
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 123/247 (49%), Gaps = 8/247 (3%)
Query: 87 NTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGI 146
N ++ Y ++G A +FE D VS ++++S +++ ++ L+ R + G+
Sbjct: 115 NAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILSGFDD---NQIALNFVVR-MKSAGV 170
Query: 147 KPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNA 206
D T LS C +GS G L G + +VK G E + +G + + MY++ G R A
Sbjct: 171 VFDAFTYSTALSFC--VGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGA 228
Query: 207 AMVFELMVERNVLSWTALICGAAQWG-FCEEALVVFEKMRVAGVRPNELTFTGVLSACAH 265
VF+ M ++++SW +L+ G +Q G F EA+V+F M GV + ++FT V++ C H
Sbjct: 229 RRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCH 288
Query: 266 AGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGS 325
++ R+ + G E + L+ K G LE + M E NVV + +
Sbjct: 289 ETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMS-ERNVVSWTT 347
Query: 326 FLSACKE 332
+S+ K+
Sbjct: 348 MISSNKD 354
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 109/245 (44%), Gaps = 11/245 (4%)
Query: 102 AREVFEEAPQRD-SVSLSSMISAYNNIGSSKQGLSLFRRVLL--FEGIKPDQVTAGAVLS 158
A ++F+ + QR+ + S++ IS S + LS+F+ L + G D+VT L
Sbjct: 27 AHKLFDGSSQRNATTSINHSISESLRRNSPARALSIFKENLQLGYFGRHMDEVTLCLALK 86
Query: 159 GCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNV 218
C L G +HGF +G+ + ++ MY K G NA +FE +V+ +V
Sbjct: 87 ACRG----DLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDV 142
Query: 219 LSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKM 278
+SW ++ G + + AL +M+ AGV + T++ LS C + G +
Sbjct: 143 VSWNTILSG---FDDNQIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQST 199
Query: 279 IEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEM 338
+ G+E + S + + +SG A + M + +++ + S LS + F
Sbjct: 200 VVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFK-DMISWNSLLSGLSQEGTFGF 258
Query: 339 AERVI 343
VI
Sbjct: 259 EAVVI 263
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 58/117 (49%), Gaps = 6/117 (5%)
Query: 37 QHLHAHIIKLGFAPTHLHVANCLLNAYVLLSFLDAC-ILFDEMPNRNTVTWNTMIVGYSR 95
Q HAH++KLG + V++ LL+ Y +D +F+EM +N W ++I YS
Sbjct: 494 QRCHAHLLKLGLNSCPV-VSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSS 552
Query: 96 SGDVQRAREVF----EEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKP 148
GD + +F +E D V+ S+++A N G +G +F ++ ++P
Sbjct: 553 HGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEP 609
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 94/318 (29%), Positives = 168/318 (52%), Gaps = 26/318 (8%)
Query: 82 NTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVL 141
+T N++I Y++ G + ++ +FE +RD VS +++IS Y Q + L + +L
Sbjct: 380 DTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGY------AQNVDLCKALL 433
Query: 142 LFEGIK------PDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVN 195
LFE +K D T ++L C+ G+L + GK +H ++++ + + LV+
Sbjct: 434 LFEEMKFKTVQQVDSFTVVSLLQACSSAGALPV--GKLIHCIVIRSFIRPCSLVDTALVD 491
Query: 196 MYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELT 255
MY+K G L A F+ + ++V+SW LI G G + AL ++ + +G+ PN +
Sbjct: 492 MYSKCGYLEAAQRCFDSISWKDVVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVI 551
Query: 256 FTGVLSACAHAGLVEEGRRYF-KMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTM 314
F VLS+C+H G+V++G + F M+ D+G+EP H A +V L+ ++ R+E+A++ K
Sbjct: 552 FLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNHEHLACVVDLLCRAKRIEDAFKFYKEN 611
Query: 315 KVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPEDDRGIYRLIHDLYVM------ 368
P++ V G L AC+ + + E+ + + E ++ + KP D +L H M
Sbjct: 612 FTRPSIDVLGIILDACRANGKTEVEDIICEDMIEL-KPGDAGHYVKLGHSFAAMKRWDDV 670
Query: 369 GEKWEEAAKLG----PGF 382
E W + LG PG+
Sbjct: 671 SESWNQMRSLGLKKLPGW 688
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/268 (29%), Positives = 138/268 (51%), Gaps = 12/268 (4%)
Query: 87 NTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGI 146
N+M+ Y + V A+++F++ QRD VS ++MIS Y ++G+ + L L R + +G+
Sbjct: 183 NSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYR-MRGDGL 241
Query: 147 KPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNA 206
+PDQ T GA LS M L + G+ +H IVK G++++ L L+ MY K G +
Sbjct: 242 RPDQQTFGASLSVSGTMCDLEM--GRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEAS 299
Query: 207 AMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHA 266
V E + ++V+ WT +I G + G E+AL+VF +M +G + V+++CA
Sbjct: 300 YRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQL 359
Query: 267 GLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSF 326
G + G + +G SL+ + K G L+++ I + M E ++V + +
Sbjct: 360 GSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMN-ERDLVSWNAI 418
Query: 327 LSA-------CKEHKQF-EMAERVIEQV 346
+S CK F EM + ++QV
Sbjct: 419 ISGYAQNVDLCKALLLFEEMKFKTVQQV 446
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 98/376 (26%), Positives = 164/376 (43%), Gaps = 71/376 (18%)
Query: 39 LHAHIIKLGFAPTHLHVANCLLNAYVLLSFLDACI-LFDEMPNRNTVTWNTMIVGYSRSG 97
LH I+K GF +H+ L+ Y+ +A + + +PN++ V W MI G R G
Sbjct: 267 LHCQIVKTGF-DVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLG 325
Query: 98 DVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVL 157
++A VF E Q S LSS E I +V+
Sbjct: 326 RAEKALIVFSEMLQSGS-DLSS------------------------EAI-------ASVV 353
Query: 158 SGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERN 217
+ CA +GS L G SVHG+++++G+ L+ +L+ MYAK G L + ++FE M ER+
Sbjct: 354 ASCAQLGSFDL--GASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERD 411
Query: 218 VLSWTALICGAAQWGFCEEALVVFEKMRVAGVRP-NELTFTGVLSACAHAGLVEEGRRYF 276
++SW A+I G AQ +AL++FE+M+ V+ + T +L AC+ AG + G+
Sbjct: 412 LVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIH 471
Query: 277 KMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMK--------------------- 315
++ + P +LV + K G LE A ++
Sbjct: 472 CIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWKDVVSWGILIAGYGFHGKGD 531
Query: 316 -------------VEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPEDDRGIYRLI 362
+EPN V+F + LS+C + + ++ ++R E + +
Sbjct: 532 IALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNHEHLACV 591
Query: 363 HDLYVMGEKWEEAAKL 378
DL ++ E+A K
Sbjct: 592 VDLLCRAKRIEDAFKF 607
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/334 (26%), Positives = 157/334 (47%), Gaps = 39/334 (11%)
Query: 15 DSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLLNAYVLLSFLDACIL 74
D+F LK+C S L L+ +H ++ GF+ + ++++ L+N Y
Sbjct: 45 DTFTFPSLLKACAS-LQRLSFGLSIHQQVLVNGFS-SDFYISSSLVNLY----------- 91
Query: 75 FDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGL 134
++ G + AR+VFEE +RD V ++MI Y+ G +
Sbjct: 92 -------------------AKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEAC 132
Query: 135 SLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLV 194
SL + F+GIKP VT +LSG + L + +H F V G++ + + +++
Sbjct: 133 SLVNE-MRFQGIKPGPVTLLEMLSGVLEITQL-----QCLHDFAVIYGFDCDIAVMNSML 186
Query: 195 NMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNEL 254
N+Y K + +A +F+ M +R+++SW +I G A G E L + +MR G+RP++
Sbjct: 187 NLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQ 246
Query: 255 TFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTM 314
TF LS +E GR I G + +H +L+ + K G+ E +Y +++T+
Sbjct: 247 TFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETI 306
Query: 315 KVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLR 348
+VV + +S + E A V ++L+
Sbjct: 307 P-NKDVVCWTVMISGLMRLGRAEKALIVFSEMLQ 339
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 114/217 (52%), Gaps = 15/217 (6%)
Query: 117 LSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHG 176
+S I+ ++ G KQ LS F +L + PD T ++L CA + L G S+H
Sbjct: 14 FNSHINHLSSHGDHKQVLSTFSS-MLANKLLPDTFTFPSLLKACASLQRLSF--GLSIHQ 70
Query: 177 FIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEE 236
++ NG+ + + ++LVN+YAK G+L +A VFE M ER+V+ WTA+I ++ G E
Sbjct: 71 QVLVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGE 130
Query: 237 ALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVE----EGRRYFKMIEDYGMEPKVHHYA 292
A + +MR G++P +T +LS G++E + F +I YG + +
Sbjct: 131 ACSLVNEMRFQGIKPGPVTLLEMLS-----GVLEITQLQCLHDFAVI--YGFDCDIAVMN 183
Query: 293 SLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSA 329
S++ L K + +A ++ M+ + ++V + + +S
Sbjct: 184 SMLNLYCKCDHVGDAKDLFDQME-QRDMVSWNTMISG 219
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 94/296 (31%), Positives = 162/296 (54%), Gaps = 10/296 (3%)
Query: 88 TMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIK 147
++I Y++ V VF A + + S++I+ L LF+R + E ++
Sbjct: 359 SLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKR-MRREDVE 417
Query: 148 PDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAA 207
P+ T ++L A + L ++H ++ K G+ + + LV++Y+K G L +A
Sbjct: 418 PNIATLNSLLPAYAALADLR--QAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAH 475
Query: 208 MVFELMVER----NVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSAC 263
+F + E+ +V+ W ALI G G AL VF +M +GV PNE+TFT L+AC
Sbjct: 476 KIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNAC 535
Query: 264 AHAGLVEEGRRYFK-MIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVV 322
+H+GLVEEG F+ M+E Y + +HY +V L+G++GRL+EAY +I T+ EP V
Sbjct: 536 SHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTV 595
Query: 323 FGSFLSACKEHKQFEMAERVIEQVLRMVKPEDDRGIYRLIHDLYVMGEKWEEAAKL 378
+G+ L+AC H+ ++ E ++ + +PE+ G Y L+ ++Y +W++ K+
Sbjct: 596 WGALLAACVTHENVQLGEMAANKLFEL-EPENT-GNYVLLANIYAALGRWKDMEKV 649
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/341 (26%), Positives = 152/341 (44%), Gaps = 40/341 (11%)
Query: 12 VPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLLNAYVLLSFLD- 70
V D IV L C HL L + +++H +++ + V N L+N Y+ +D
Sbjct: 214 VDLDHATIVSMLPVC-GHLKDLEMGRNVHK-LVEEKRLGDKIEVKNALVNMYLKCGRMDE 271
Query: 71 ACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSS 130
A +FD M R+ +TW MI GY+ GDV+ A E+
Sbjct: 272 ARFVFDRMERRDVITWTCMINGYTEDGDVENALELC------------------------ 307
Query: 131 KQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELG 190
R++ FEG++P+ VT +++S C +L + GK +HG+ V+ + +
Sbjct: 308 --------RLMQFEGVRPNAVTIASLVSVCG--DALKVNDGKCLHGWAVRQQVYSDIIIE 357
Query: 191 ATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVR 250
+L++MYAK + VF + + W+A+I G Q +AL +F++MR V
Sbjct: 358 TSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVE 417
Query: 251 PNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEI 310
PN T +L A A + + + G + LV++ K G LE A++I
Sbjct: 418 PNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKI 477
Query: 311 ---IKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLR 348
I+ +VV++G+ +S H A +V +++R
Sbjct: 478 FNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVR 518
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 115/234 (49%), Gaps = 11/234 (4%)
Query: 81 RNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRV 140
R+ N ++ Y G V+ AR+VF+ RD +S ++MIS Y G L +F
Sbjct: 150 RDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDW- 208
Query: 141 LLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKG 200
++ E + D T ++L C H+ L + G++VH + + E+ LVNMY K
Sbjct: 209 MVNESVDLDHATIVSMLPVCGHLKDLEM--GRNVHKLVEEKRLGDKIEVKNALVNMYLKC 266
Query: 201 GVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVL 260
G + A VF+ M R+V++WT +I G + G E AL + M+ GVRPN +T ++
Sbjct: 267 GRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLV 326
Query: 261 SACAHAGLVEEGRRYFKMIEDYGMEPKVHH----YASLVYLVGKSGRLEEAYEI 310
S C A V +G K + + + +V+ SL+ + K R++ + +
Sbjct: 327 SVCGDALKVNDG----KCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRV 376
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 128/255 (50%), Gaps = 6/255 (2%)
Query: 87 NTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGI 146
+T+ V Y+ G + AR++FEE PQ +S + +I Y G +S+F R ++ EG+
Sbjct: 53 STLSVTYALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIR-MVSEGV 111
Query: 147 K--PDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLR 204
K PD T V + S+ L G VHG I+++ + + + L+ MY G +
Sbjct: 112 KCVPDGYTYPFVAKAAGELKSMKL--GLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVE 169
Query: 205 NAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACA 264
A VF++M R+V+SW +I G + G+ +AL++F+ M V + T +L C
Sbjct: 170 MARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCG 229
Query: 265 HAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFG 324
H +E GR K++E+ + K+ +LV + K GR++EA + M+ +V+ +
Sbjct: 230 HLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRME-RRDVITWT 288
Query: 325 SFLSACKEHKQFEMA 339
++ E E A
Sbjct: 289 CMINGYTEDGDVENA 303
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 88/298 (29%), Positives = 169/298 (56%), Gaps = 6/298 (2%)
Query: 82 NTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVL 141
+ V +N ++ Y SG AR+VF+ +R+ V+ +S+IS + + +LFR+ +
Sbjct: 270 DQVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRK-M 328
Query: 142 LFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGG 201
E I T +L C+ + +L L GK +H I+K+ + + L +L++MY K G
Sbjct: 329 QEEMIGFSWATLTTILPACSRVAAL--LTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCG 386
Query: 202 VLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLS 261
+ + VF++M+ +++ SW ++ A G EE + +FE M +GV P+ +TF +LS
Sbjct: 387 EVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLS 446
Query: 262 ACAHAGLVEEGRRYF-KMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNV 320
C+ GL E G F +M ++ + P + HYA LV ++G++G+++EA ++I+TM +P+
Sbjct: 447 GCSDTGLTEYGLSLFERMKTEFRVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSA 506
Query: 321 VVFGSFLSACKEHKQFEMAERVIEQVLRMVKPEDDRGIYRLIHDLYVMGEKWEEAAKL 378
++GS L++C+ H + E + + L +++P + G Y ++ ++Y + W+ K+
Sbjct: 507 SIWGSLLNSCRLHGNVSVGE-IAAKELFVLEPHNP-GNYVMVSNIYADAKMWDNVDKI 562
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 138/312 (44%), Gaps = 14/312 (4%)
Query: 12 VPFDSFCIVFT----LKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLLNAYVLLS 67
+P+ F VFT L T ++T+I++ + L + + + ++A L
Sbjct: 92 IPWRQF--VFTKPLGLSKSTKLDEAVTLIENSSSSPSNLSTPEAYTDLLHACISAKSLHH 149
Query: 68 FLDACILFDEMPN--RNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVS---LSSMIS 122
+ C L P+ N + +I +S + AR++F++ ++ ++M
Sbjct: 150 GIKICSLILNNPSLRHNPKLLSKLITLFSVCRRLDLARKIFDDVTDSSLLTEKVWAAMAI 209
Query: 123 AYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNG 182
Y+ GS + L ++ +L I+P + L C + L + G+ +H IVK
Sbjct: 210 GYSRNGSPRDALIVYVD-MLCSFIEPGNFSISVALKACVDLKDLRV--GRGIHAQIVKRK 266
Query: 183 WELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFE 242
+++ + L+ +Y + G+ +A VF+ M ERNV++W +LI ++ E +F
Sbjct: 267 EKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFR 326
Query: 243 KMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSG 302
KM+ + + T T +L AC+ + G+ I +P V SL+ + GK G
Sbjct: 327 KMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCG 386
Query: 303 RLEEAYEIIKTM 314
+E + + M
Sbjct: 387 EVEYSRRVFDVM 398
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 149 bits (377), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 84/258 (32%), Positives = 147/258 (56%), Gaps = 5/258 (1%)
Query: 74 LFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQG 133
+FD+MP R+ TWNTMIV YS S + A ++F P ++++S +++IS Y GS +
Sbjct: 50 MFDKMPERDEFTWNTMIVAYSNSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEA 109
Query: 134 LSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATL 193
+LF + +GIKP++ T G+VL C + + LL G+ +HG +K G++L+ + L
Sbjct: 110 FNLFWE-MQSDGIKPNEYTLGSVLRMCTSL--VLLLRGEQIHGHTIKTGFDLDVNVVNGL 166
Query: 194 VNMYAKGGVLRNAAMVFELMV-ERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPN 252
+ MYA+ + A +FE M E+N ++WT+++ G +Q GF +A+ F +R G + N
Sbjct: 167 LAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSN 226
Query: 253 ELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIK 312
+ TF VL+ACA G + I G + ++ ++L+ + K +E A +++
Sbjct: 227 QYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLE 286
Query: 313 TMKVEPNVVVFGSFLSAC 330
M+V+ +VV + S + C
Sbjct: 287 GMEVD-DVVSWNSMIVGC 303
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 92/379 (24%), Positives = 169/379 (44%), Gaps = 72/379 (18%)
Query: 1 MHLYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLL 60
+ ++ ++H + D F I L + I H I+K G+A
Sbjct: 313 LSMFGRMHERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYA----------- 361
Query: 61 NAYVLLSFLDACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSM 120
Y L++ N ++ Y++ G + A +VFE ++D +S +++
Sbjct: 362 -TYKLVN-------------------NALVDMYAKRGIMDSALKVFEGMIEKDVISWTAL 401
Query: 121 ISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVK 180
++ + GS + L LF + + GI PD++ +VLS A + L G+ VHG +K
Sbjct: 402 VTGNTHNGSYDEALKLFCNMRV-GGITPDKIVTASVLSASAELTLLEF--GQQVHGNYIK 458
Query: 181 NGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVV 240
+G+ + + +LV MY K G L +A ++F M R++++WT LI G A+ G E+A
Sbjct: 459 SGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIRDLITWTCLIVGYAKNGLLEDAQRY 518
Query: 241 FEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGK 300
F+ MR YG+ P HYA ++ L G+
Sbjct: 519 FDSMRTV----------------------------------YGITPGPEHYACMIDLFGR 544
Query: 301 SGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPEDDRGI-Y 359
SG + +++ M+VEP+ V+ + L+A ++H E ER + ++ + E + + Y
Sbjct: 545 SGDFVKVEQLLHQMEVEPDATVWKAILAASRKHGNIENGERAAKTLMEL---EPNNAVPY 601
Query: 360 RLIHDLYVMGEKWEEAAKL 378
+ ++Y + +EAA +
Sbjct: 602 VQLSNMYSAAGRQDEAANV 620
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 93/347 (26%), Positives = 161/347 (46%), Gaps = 37/347 (10%)
Query: 1 MHLYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLL 60
+ + L R G + + L +C S + + + +H I+K GF T+++V + L+
Sbjct: 212 IECFRDLRREGNQSNQYTFPSVLTACAS-VSACRVGVQVHCCIVKSGF-KTNIYVQSALI 269
Query: 61 NAYVLLSFLDAC-ILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSS 119
+ Y +++ L + M + V+WN+MIVG R G + A +F +RD
Sbjct: 270 DMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERD------ 323
Query: 120 MISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIV 179
+K D T ++L+ C + + S H IV
Sbjct: 324 --------------------------MKIDDFTIPSILN-CFALSRTEMKIASSAHCLIV 356
Query: 180 KNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALV 239
K G+ + LV+MYAK G++ +A VFE M+E++V+SWTAL+ G G +EAL
Sbjct: 357 KTGYATYKLVNNALVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEALK 416
Query: 240 VFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVG 299
+F MRV G+ P+++ VLSA A L+E G++ G + SLV +
Sbjct: 417 LFCNMRVGGITPDKIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYT 476
Query: 300 KSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQV 346
K G LE+A I +M++ +++ + + ++ E A+R + +
Sbjct: 477 KCGSLEDANVIFNSMEIR-DLITWTCLIVGYAKNGLLEDAQRYFDSM 522
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 96/378 (25%), Positives = 168/378 (44%), Gaps = 73/378 (19%)
Query: 2 HLYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLLN 61
+L+ ++ G+ + + + L+ CTS L L + +H H IK GF ++V N LL
Sbjct: 111 NLFWEMQSDGIKPNEYTLGSVLRMCTS-LVLLLRGEQIHGHTIKTGF-DLDVNVVNGLLA 168
Query: 62 AYVLLSFL-DACILFDEMP-NRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSS 119
Y + +A LF+ M +N VTW +S
Sbjct: 169 MYAQCKRISEAEYLFETMEGEKNNVTW-------------------------------TS 197
Query: 120 MISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIV 179
M++ Y+ G + + + FR L EG + +Q T +VL+ CA + + + G VH IV
Sbjct: 198 MLTGYSQNGFAFKAIECFRD-LRREGNQSNQYTFPSVLTACASVSACRV--GVQVHCCIV 254
Query: 180 KNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALV 239
K+G++ N + + L++MYAK + +A + E M +V+SW ++I G + G EAL
Sbjct: 255 KSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALS 314
Query: 240 VFEKMRVAGVRPNELTFTGVL------------SACAHAGLVEEGRRYFKMIEDY----- 282
+F +M ++ ++ T +L ++ AH +V+ G +K++ +
Sbjct: 315 MFGRMHERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLVNNALVDMY 374
Query: 283 --------------GM-EPKVHHYASLVYLVGKSGRLEEAYEIIKTMKV---EPNVVVFG 324
GM E V + +LV +G +EA ++ M+V P+ +V
Sbjct: 375 AKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTA 434
Query: 325 SFLSACKEHKQFEMAERV 342
S LSA E E ++V
Sbjct: 435 SVLSASAELTLLEFGQQV 452
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 102/226 (45%), Gaps = 19/226 (8%)
Query: 1 MHLYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLL 60
+ L+ + G+ D + ++ S ++ L L Q +H + IK GF P+ L V N L+
Sbjct: 415 LKLFCNMRVGGITPDKI-VTASVLSASAELTLLEFGQQVHGNYIKSGF-PSSLSVNNSLV 472
Query: 61 NAYVLL-SFLDACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVS--- 116
Y S DA ++F+ M R+ +TW +IVGY+++G ++ A+ F+ ++
Sbjct: 473 TMYTKCGSLEDANVIFNSMEIRDLITWTCLIVGYAKNGLLEDAQRYFDSMRTVYGITPGP 532
Query: 117 --LSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSL--GLLAGK 172
+ MI + G + L ++ ++PD A+L+ G++ G A K
Sbjct: 533 EHYACMIDLFGRSGDFVKVEQLLHQM----EVEPDATVWKAILAASRKHGNIENGERAAK 588
Query: 173 SVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNV 218
++ NA L NMY+ G AA V LM RN+
Sbjct: 589 TLMELEPN-----NAVPYVQLSNMYSAAGRQDEAANVRRLMKSRNI 629
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 108/361 (29%), Positives = 189/361 (52%), Gaps = 25/361 (6%)
Query: 18 CIVFTLKSCTSHLHSLTIIQHLHA--HIIKLGFAPTHLHVANCLLNAYVLLSFLDACILF 75
C+V +++C + S+ +I L A HI L + V +CL+ + +C
Sbjct: 307 CVV-GMRNCNVRIGSVAMINGLKACSHIGALKWGK----VFHCLV--------IRSCSFS 353
Query: 76 DEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLS 135
++ N N++I YSR D++ A VF++ + +S+IS + S++
Sbjct: 354 HDIDN----VRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSF 409
Query: 136 LFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVK-NGWELNAELGATLV 194
L + +LL G P+ +T ++L A +G+L GK H +I++ ++ L +LV
Sbjct: 410 LLKEMLL-SGFHPNHITLASILPLFARVGNLQ--HGKEFHCYILRRQSYKDCLILWNSLV 466
Query: 195 NMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNEL 254
+MYAK G + A VF+ M +R+ +++T+LI G + G E AL F+ M +G++P+ +
Sbjct: 467 DMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHV 526
Query: 255 TFTGVLSACAHAGLVEEGRRYF-KMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKT 313
T VLSAC+H+ LV EG F KM +G+ ++ HY+ +V L ++G L++A +I T
Sbjct: 527 TMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHT 586
Query: 314 MKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPEDDRGIYRLIHDLYVMGEKWE 373
+ EP+ + + L AC H + E +++L KPE G Y L+ D+Y + W
Sbjct: 587 IPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPE-HLGHYMLLADMYAVTGSWS 645
Query: 374 E 374
+
Sbjct: 646 K 646
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 103/219 (47%), Gaps = 17/219 (7%)
Query: 63 YVLLSFLDACILFDE-MPNR-------------NTVTWNTMIVGYSRSGDVQRAREVFEE 108
Y S L C+ F+E +P + ++V ++ YS + A+ + E
Sbjct: 84 YSSASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITEN 143
Query: 109 APQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGL 168
+ + + +I +Y ++ +S+++R ++ +GI+ D+ T +V+ CA + L
Sbjct: 144 SEILHPLPWNVLIGSYIRNKRFQESVSVYKR-MMSKGIRADEFTYPSVIKACAAL--LDF 200
Query: 169 LAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGA 228
G+ VHG I + N + L++MY + G + A +F+ M ER+ +SW A+I
Sbjct: 201 AYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCY 260
Query: 229 AQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAG 267
EA + ++M ++GV + +T+ + C AG
Sbjct: 261 TSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAG 299
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 108/361 (29%), Positives = 189/361 (52%), Gaps = 25/361 (6%)
Query: 18 CIVFTLKSCTSHLHSLTIIQHLHA--HIIKLGFAPTHLHVANCLLNAYVLLSFLDACILF 75
C+V +++C + S+ +I L A HI L + V +CL+ + +C
Sbjct: 307 CVV-GMRNCNVRIGSVAMINGLKACSHIGALKWGK----VFHCLV--------IRSCSFS 353
Query: 76 DEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLS 135
++ N N++I YSR D++ A VF++ + +S+IS + S++
Sbjct: 354 HDIDN----VRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSF 409
Query: 136 LFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVK-NGWELNAELGATLV 194
L + +LL G P+ +T ++L A +G+L GK H +I++ ++ L +LV
Sbjct: 410 LLKEMLL-SGFHPNHITLASILPLFARVGNLQ--HGKEFHCYILRRQSYKDCLILWNSLV 466
Query: 195 NMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNEL 254
+MYAK G + A VF+ M +R+ +++T+LI G + G E AL F+ M +G++P+ +
Sbjct: 467 DMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHV 526
Query: 255 TFTGVLSACAHAGLVEEGRRYF-KMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKT 313
T VLSAC+H+ LV EG F KM +G+ ++ HY+ +V L ++G L++A +I T
Sbjct: 527 TMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHT 586
Query: 314 MKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPEDDRGIYRLIHDLYVMGEKWE 373
+ EP+ + + L AC H + E +++L KPE G Y L+ D+Y + W
Sbjct: 587 IPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPE-HLGHYMLLADMYAVTGSWS 645
Query: 374 E 374
+
Sbjct: 646 K 646
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 103/219 (47%), Gaps = 17/219 (7%)
Query: 63 YVLLSFLDACILFDE-MPNR-------------NTVTWNTMIVGYSRSGDVQRAREVFEE 108
Y S L C+ F+E +P + ++V ++ YS + A+ + E
Sbjct: 84 YSSASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITEN 143
Query: 109 APQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGL 168
+ + + +I +Y ++ +S+++R ++ +GI+ D+ T +V+ CA + L
Sbjct: 144 SEILHPLPWNVLIGSYIRNKRFQESVSVYKR-MMSKGIRADEFTYPSVIKACAAL--LDF 200
Query: 169 LAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGA 228
G+ VHG I + N + L++MY + G + A +F+ M ER+ +SW A+I
Sbjct: 201 AYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCY 260
Query: 229 AQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAG 267
EA + ++M ++GV + +T+ + C AG
Sbjct: 261 TSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAG 299
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 107/398 (26%), Positives = 194/398 (48%), Gaps = 32/398 (8%)
Query: 1 MHLYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQ-HLHAHIIKLGFAPTHLHVANCL 59
+ +YSK G DS VF +C + + +I+ +H HL V +
Sbjct: 269 IDMYSK----GFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEAV 324
Query: 60 -LNAYVLLSFLDACILFDE-MPNR-------------NTVTWNTMIVGYSRSGDVQRARE 104
++ ++S L C F++ +P + N V +++I Y+ V A
Sbjct: 325 EVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGT 384
Query: 105 VFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMG 164
V + +D VS S+MIS + G S + +S+F + P+ +T ++L+ C+
Sbjct: 385 VLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHM----RDTPNAITVISLLNACSV-- 438
Query: 165 SLGLLAGKSVHGFIVKNGWELNA-ELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTA 223
S L K HG ++ +N +G ++V+ YAK G + A F+ + E+N++SWT
Sbjct: 439 SADLRTSKWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTV 498
Query: 224 LICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYG 283
+I A G ++AL +F++M+ G PN +T+ LSAC H GLV++G FK + +
Sbjct: 499 IISAYAINGLPDKALALFDEMKQKGYTPNAVTYLAALSACNHGGLVKKGLMIFKSMVEED 558
Query: 284 MEPKVHHYASLVYLVGKSGRLEEAYEIIKTM--KVEPNVVVFGSFLSACKEH-KQFEMAE 340
+P + HY+ +V ++ ++G ++ A E+IK + V+ +G+ LS C+ K+ +
Sbjct: 559 HKPSLQHYSCIVDMLSRAGEIDTAVELIKNLPEDVKAGASAWGAILSGCRNRFKKLIITS 618
Query: 341 RVIEQVLRMVKPEDDRGIYRLIHDLYVMGEKWEEAAKL 378
V+ +VL + +P G Y L + + WE+ A +
Sbjct: 619 EVVAEVLEL-EPLCSSG-YLLASSTFAAEKSWEDVAMM 654
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 129/276 (46%), Gaps = 35/276 (12%)
Query: 87 NTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGI 146
N+++ Y+ S D AR++F+E +RD +S S +I +Y GL LF+ ++
Sbjct: 164 NSILCMYADS-DSLSARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKT 222
Query: 147 KPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWEL-NAELGATLVNMYAKGGVLRN 205
+PD VT +VL C M + + G+SVHGF ++ G++L + + +L++MY+KG + +
Sbjct: 223 EPDCVTVTSVLKACTVMEDIDV--GRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDS 280
Query: 206 AAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACA- 264
A VF+ RN++SW +++ G +EAL +F M V +E+T +L C
Sbjct: 281 AFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKF 340
Query: 265 ----------HAGLVEEGRR--------------YFKMIEDYGMEPKVHHYASLVYL--- 297
H ++ G +++D G Y +V
Sbjct: 341 FEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTM 400
Query: 298 ---VGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSAC 330
+ +GR +EA I M+ PN + S L+AC
Sbjct: 401 ISGLAHAGRSDEAISIFCHMRDTPNAITVISLLNAC 436
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/363 (22%), Positives = 149/363 (41%), Gaps = 80/363 (22%)
Query: 7 LHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLLNAYVLL 66
+H D + LK+CT + + + + +H I+ GF + V N L++ Y
Sbjct: 217 VHEAKTEPDCVTVTSVLKACTV-MEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMY--- 272
Query: 67 SFLDACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNN 126
S+ DV A VF+E R+ VS +S+++ + +
Sbjct: 273 ---------------------------SKGFDVDSAFRVFDETTCRNIVSWNSILAGFVH 305
Query: 127 IGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELN 186
+ L +F +++ E ++ D+VT ++L C L KS+HG I++ G+E N
Sbjct: 306 NQRYDEALEMFH-LMVQEAVEVDEVTVVSLLRVCKFFEQP--LPCKSIHGVIIRRGYESN 362
Query: 187 AELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRV 246
++L++ Y ++ +A V + M ++V+S + +I G A G +EA+ +F MR
Sbjct: 363 EVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHMRD 422
Query: 247 AGVRPNELTFTGVLSAC------------------------------------AHAGLVE 270
PN +T +L+AC A G +E
Sbjct: 423 T---PNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIE 479
Query: 271 EGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVE---PNVVVFGSFL 327
RR F I E + + ++ +G ++A + MK + PN V + + L
Sbjct: 480 MARRTFDQI----TEKNIISWTVIISAYAINGLPDKALALFDEMKQKGYTPNAVTYLAAL 535
Query: 328 SAC 330
SAC
Sbjct: 536 SAC 538
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 122/255 (47%), Gaps = 9/255 (3%)
Query: 87 NTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGI 146
N++ Y + GD+ F+ RDSVS + ++ + G ++GL F ++ ++ G
Sbjct: 65 NSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVW-GF 123
Query: 147 KPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNA 206
+P+ T V+ C + G+ +HG+++++G+ + + +++ MYA L +A
Sbjct: 124 EPNTSTLVLVIHACRSL----WFDGEKIHGYVIRSGFCGISSVQNSILCMYADSDSL-SA 178
Query: 207 AMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKM-RVAGVRPNELTFTGVLSACAH 265
+F+ M ER+V+SW+ +I Q L +F++M A P+ +T T VL AC
Sbjct: 179 RKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTV 238
Query: 266 AGLVEEGRRYFKMIEDYGME-PKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFG 324
++ GR G + V SL+ + K ++ A+ + N+V +
Sbjct: 239 MEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCR-NIVSWN 297
Query: 325 SFLSACKEHKQFEMA 339
S L+ +++++ A
Sbjct: 298 SILAGFVHNQRYDEA 312
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 39/74 (52%)
Query: 190 GATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGV 249
G ++ + Y K G L + F+ M R+ +SW ++ G +GF EE L F K+RV G
Sbjct: 64 GNSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGF 123
Query: 250 RPNELTFTGVLSAC 263
PN T V+ AC
Sbjct: 124 EPNTSTLVLVIHAC 137
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 146 bits (368), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 165/303 (54%), Gaps = 11/303 (3%)
Query: 82 NTVTWNTMIVGYSRSGDVQRAREVFEEAPQR----DSVSLSSMISAYNNIGSSKQGLSLF 137
N +TWN +I+ R+G V A+++F + + +S ++M++ G S++ + LF
Sbjct: 475 NVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAI-LF 533
Query: 138 RRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELN-AELGATLVNM 196
R + G++P+ + LS CAH+ SL + G+++HG+I++N + + +LV+M
Sbjct: 534 LRKMQESGLRPNAFSITVALSACAHLASLHI--GRTIHGYIIRNLQHSSLVSIETSLVDM 591
Query: 197 YAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTF 256
YAK G + A VF + + A+I A +G +EA+ ++ + G++P+ +T
Sbjct: 592 YAKCGDINKAEKVFGSKLYSELPLSNAMISAYALYGNLKEAIALYRSLEGVGLKPDNITI 651
Query: 257 TGVLSACAHAGLVEEGRRYF-KMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMK 315
T VLSAC HAG + + F ++ M+P + HY +V L+ +G E+A +I+ M
Sbjct: 652 TNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRLIEEMP 711
Query: 316 VEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPEDDRGIYRLIHDLYVMGEKWEEA 375
+P+ + S +++C + ++ E+ + + ++L +PE+ G Y I + Y + W+E
Sbjct: 712 FKPDARMIQSLVASCNKQRKTELVDYLSRKLLE-SEPENS-GNYVTISNAYAVEGSWDEV 769
Query: 376 AKL 378
K+
Sbjct: 770 VKM 772
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 158/319 (49%), Gaps = 38/319 (11%)
Query: 15 DSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLLNAYVLLSFLD-ACI 73
D+F + K+C + L + +H +++K G + VA+ L + Y LD A
Sbjct: 172 DNFVVPNVCKACGA-LKWSRFGRGVHGYVVKSGLEDC-VFVASSLADMYGKCGVLDDASK 229
Query: 74 LFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQG 133
+FDE+P+RN V WN ++VGY ++G + A +F + +
Sbjct: 230 VFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRK---------------------- 267
Query: 134 LSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATL 193
+G++P +VT LS A+MG G+ GK H + NG EL+ LG +L
Sbjct: 268 ----------QGVEPTRVTVSTCLSASANMG--GVEEGKQSHAIAIVNGMELDNILGTSL 315
Query: 194 VNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNE 253
+N Y K G++ A MVF+ M E++V++W +I G Q G E+A+ + + MR+ ++ +
Sbjct: 316 LNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDC 375
Query: 254 LTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKT 313
+T ++SA A ++ G+ + E + ++++ + K G + +A ++ +
Sbjct: 376 VTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDS 435
Query: 314 MKVEPNVVVFGSFLSACKE 332
VE +++++ + L+A E
Sbjct: 436 -TVEKDLILWNTLLAAYAE 453
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 89/370 (24%), Positives = 175/370 (47%), Gaps = 40/370 (10%)
Query: 1 MHLYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLL 60
+ L+S + + GV + V T S ++++ + + HA I G ++ + LL
Sbjct: 259 IRLFSDMRKQGVE-PTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNI-LGTSLL 316
Query: 61 NAYVLLSFLD-ACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSS 119
N Y + ++ A ++FD M ++ VTWN +I GY + G V+ D++ +
Sbjct: 317 NFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVE------------DAIYMC- 363
Query: 120 MISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIV 179
+++ E +K D VT ++S A +L L GK V + +
Sbjct: 364 -------------------QLMRLEKLKYDCVTLATLMSAAARTENLKL--GKEVQCYCI 402
Query: 180 KNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALV 239
++ +E + L +T+++MYAK G + +A VF+ VE++++ W L+ A+ G EAL
Sbjct: 403 RHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALR 462
Query: 240 VFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVG 299
+F M++ GV PN +T+ ++ + G V+E + F ++ G+ P + + +++ +
Sbjct: 463 LFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMV 522
Query: 300 KSGRLEEAYEIIKTMK---VEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPEDDR 356
++G EEA ++ M+ + PN LSAC + + ++R ++
Sbjct: 523 QNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLV 582
Query: 357 GIYRLIHDLY 366
I + D+Y
Sbjct: 583 SIETSLVDMY 592
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 84/275 (30%), Positives = 136/275 (49%), Gaps = 5/275 (1%)
Query: 81 RNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRV 140
RN +++ Y++ ++ A +F + R+ S +++I IG + L F +
Sbjct: 105 RNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEM 164
Query: 141 LLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKG 200
L E I PD V C + G+ VHG++VK+G E + ++L +MY K
Sbjct: 165 LENE-IFPDNFVVPNVCKACGALKWSRF--GRGVHGYVVKSGLEDCVFVASSLADMYGKC 221
Query: 201 GVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVL 260
GVL +A+ VF+ + +RN ++W AL+ G Q G EEA+ +F MR GV P +T + L
Sbjct: 222 GVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCL 281
Query: 261 SACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNV 320
SA A+ G VEEG++ + GME SL+ K G +E A + M E +V
Sbjct: 282 SASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRM-FEKDV 340
Query: 321 VVFGSFLSACKEHKQFEMAERVIEQVLRMVKPEDD 355
V + +S + E A + Q++R+ K + D
Sbjct: 341 VTWNLIISGYVQQGLVEDAIYMC-QLMRLEKLKYD 374
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 111/249 (44%), Gaps = 7/249 (2%)
Query: 107 EEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSL 166
E+A S S +S+ G K+ LSL + F ++ G +L GC + L
Sbjct: 28 EQAHSPSSTSYFHRVSSLCKNGEIKEALSLVTE-MDFRNLRIGPEIYGEILQGCVYERDL 86
Query: 167 GLLAGKSVHGFIVKNG--WELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTAL 224
GK +H I+KNG + N + LV YAK L A ++F + RNV SW A+
Sbjct: 87 S--TGKQIHARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAI 144
Query: 225 ICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGM 284
I + G CE AL+ F +M + P+ V AC GR + G+
Sbjct: 145 IGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGL 204
Query: 285 EPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIE 344
E V +SL + GK G L++A ++ + + N V + + + ++ + E A R+
Sbjct: 205 EDCVFVASSLADMYGKCGVLDDASKVFDEIP-DRNAVAWNALMVGYVQNGKNEEAIRLFS 263
Query: 345 QVLRM-VKP 352
+ + V+P
Sbjct: 264 DMRKQGVEP 272
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 145 bits (366), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 105/367 (28%), Positives = 179/367 (48%), Gaps = 60/367 (16%)
Query: 3 LYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQH--------LHAHIIKLGFAPTHLH 54
++ ++H GV FD + L C+S S ++ + LH+ +K G T
Sbjct: 248 VFMRMHSDGVGFDRATL---LNICSSLYKSSDLVPNEVSKCCLQLHSLTVKSGLV-TQTE 303
Query: 55 VANCLLNAY--VLLSFLDACILFDEMPN-RNTVTWNTMIVGYSRSGDVQRAREVFEEAPQ 111
VA L+ Y +L + D LF EM + R+ V WN +I ++ D +RA +F + Q
Sbjct: 304 VATALIKVYSEMLEDYTDCYKLFMEMSHCRDIVAWNGIITAFAVY-DPERAIHLFGQLRQ 362
Query: 112 RDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAG 171
E + PD T +VL CA GL+
Sbjct: 363 --------------------------------EKLSPDWYTFSSVLKACA-----GLVTA 385
Query: 172 K---SVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGA 228
+ S+H ++K G+ + L +L++ YAK G L VF+ M R+V+SW +++
Sbjct: 386 RHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAY 445
Query: 229 AQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFK-MIEDYGMEPK 287
+ G + L VF+KM + P+ TF +LSAC+HAG VEEG R F+ M E P+
Sbjct: 446 SLHGQVDSILPVFQKM---DINPDSATFIALLSACSHAGRVEEGLRIFRSMFEKPETLPQ 502
Query: 288 VHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVL 347
++HYA ++ ++ ++ R EA E+IK M ++P+ VV+ + L +C++H + + +++
Sbjct: 503 LNHYACVIDMLSRAERFAEAEEVIKQMPMDPDAVVWIALLGSCRKHGNTRLGKLAADKLK 562
Query: 348 RMVKPED 354
+V+P +
Sbjct: 563 ELVEPTN 569
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 96/186 (51%), Gaps = 11/186 (5%)
Query: 80 NRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRR 139
++N + N +I Y++ G++ AR+VF+ P+R+ VS +++I+ Y G+ ++G LF
Sbjct: 93 SQNVILANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSS 152
Query: 140 VLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAK 199
+L P++ T +VL+ C + GK VHG +K G + + +++MY +
Sbjct: 153 ML--SHCFPNEFTLSSVLTSCRYE------PGKQVHGLALKLGLHCSIYVANAVISMYGR 204
Query: 200 ---GGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTF 256
G A VFE + +N+++W ++I ++A+ VF +M GV + T
Sbjct: 205 CHDGAAAYEAWTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRATL 264
Query: 257 TGVLSA 262
+ S+
Sbjct: 265 LNICSS 270
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 110/240 (45%), Gaps = 47/240 (19%)
Query: 95 RSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAG 154
RSGD++RA +F AP V L S Q
Sbjct: 38 RSGDIRRAVSLFYSAP----VELQS------------------------------QQAYA 63
Query: 155 AVLSGCAHMGSLGLLAGKSVHGFIVKNGW--ELNAELGATLVNMYAKGGVLRNAAMVFEL 212
A+ CA +L L G ++H ++ + + N L L+NMYAK G + A VF+
Sbjct: 64 ALFQACAEQRNL--LDGINLHHHMLSHPYCYSQNVILANFLINMYAKCGNILYARQVFDT 121
Query: 213 MVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEG 272
M ERNV+SWTALI G Q G +E +F M ++ PNE T + VL++C + E G
Sbjct: 122 MPERNVVSWTALITGYVQAGNEQEGFCLFSSM-LSHCFPNEFTLSSVLTSCRY----EPG 176
Query: 273 RRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYE---IIKTMKVEPNVVVFGSFLSA 329
++ + G+ ++ +++ + G+ AYE + + +K + N+V + S ++A
Sbjct: 177 KQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIKFK-NLVTWNSMIAA 235
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 89/157 (56%), Gaps = 16/157 (10%)
Query: 1 MHLYSKLHRTGVPFDSFCIVFTLKSCT---SHLHSLTIIQHLHAHIIKLGF-APTHLHVA 56
+HL+ +L + + D + LK+C + H+L+I HA +IK GF A T L+
Sbjct: 354 IHLFGQLRQEKLSPDWYTFSSVLKACAGLVTARHALSI----HAQVIKGGFLADTVLN-- 407
Query: 57 NCLLNAYVLLSFLDACI-LFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAP-QRDS 114
N L++AY LD C+ +FD+M +R+ V+WN+M+ YS G V VF++ DS
Sbjct: 408 NSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKMDINPDS 467
Query: 115 VSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQV 151
+ +++SA ++ G ++GL +FR +FE KP+ +
Sbjct: 468 ATFIALLSACSHAGRVEEGLRIFRS--MFE--KPETL 500
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 145 bits (365), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 102/350 (29%), Positives = 179/350 (51%), Gaps = 39/350 (11%)
Query: 3 LYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLLNA 62
+Y + GV DS +V L++C + ++ IIK GF + HVA+ L+N
Sbjct: 489 VYKNMKLHGVCPDSRTMVGMLQTC-AFCSDYARGSCVYGQIIKHGF-DSECHVAHALINM 546
Query: 63 YVLLSFLDACI-LFDEMP-NRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSM 120
+ L A I LFD+ ++TV+WN M+ GY G + A F
Sbjct: 547 FTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATF-------------- 592
Query: 121 ISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVK 180
R + E +P+ VT ++ A + +L + G SVH +++
Sbjct: 593 ------------------RQMKVEKFQPNAVTFVNIVRAAAELSALRV--GMSVHSSLIQ 632
Query: 181 NGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVV 240
G+ +G +LV+MYAK G++ ++ F + + ++SW ++ A G A+ +
Sbjct: 633 CGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTMLSAYAAHGLASCAVSL 692
Query: 241 FEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYF-KMIEDYGMEPKVHHYASLVYLVG 299
F M+ ++P+ ++F VLSAC HAGLVEEG+R F +M E + +E +V HYA +V L+G
Sbjct: 693 FLSMQENELKPDSVSFLSVLSACRHAGLVEEGKRIFEEMGERHKIEAEVEHYACMVDLLG 752
Query: 300 KSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRM 349
K+G EA E+++ M+V+ +V V+G+ L++ + H ++ + Q++++
Sbjct: 753 KAGLFGEAVEMMRRMRVKTSVGVWGALLNSSRMHCNLWLSNAALCQLVKL 802
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 127/260 (48%), Gaps = 3/260 (1%)
Query: 87 NTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGI 146
+++ YS+ G+++ A ++F RD VS S+MI++Y G + +SLFR ++ I
Sbjct: 339 TSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIH-I 397
Query: 147 KPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNA 206
KP+ VT +VL GCA + + L GKS+H + +K E E +++MYAK G A
Sbjct: 398 KPNAVTLTSVLQGCAGVAASRL--GKSIHCYAIKADIESELETATAVISMYAKCGRFSPA 455
Query: 207 AMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHA 266
FE + ++ +++ AL G Q G +A V++ M++ GV P+ T G+L CA
Sbjct: 456 LKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFC 515
Query: 267 GLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSF 326
G + I +G + + H +L+ + K L A + E + V +
Sbjct: 516 SDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIM 575
Query: 327 LSACKEHKQFEMAERVIEQV 346
++ H Q E A Q+
Sbjct: 576 MNGYLLHGQAEEAVATFRQM 595
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 136/316 (43%), Gaps = 38/316 (12%)
Query: 85 TWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFE 144
T +I Y++ G A + FE P +D+V+ +++ Y IG + + +++ + L
Sbjct: 438 TATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKL-H 496
Query: 145 GIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLR 204
G+ PD T +L CA G V+G I+K+G++ + L+NM+ K L
Sbjct: 497 GVCPDSRTMVGMLQTCAFCSDYA--RGSCVYGQIIKHGFDSECHVAHALINMFTKCDALA 554
Query: 205 NAAMVFELM-VERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSAC 263
A ++F+ E++ +SW ++ G G EEA+ F +M+V +PN +TF ++ A
Sbjct: 555 AAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAA 614
Query: 264 AHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEI------------- 310
A + G + G + SLV + K G +E + +
Sbjct: 615 AELSALRVGMSVHSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWN 674
Query: 311 ---------------------IKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRM 349
++ +++P+ V F S LSAC+ E +R+ E++
Sbjct: 675 TMLSAYAAHGLASCAVSLFLSMQENELKPDSVSFLSVLSACRHAGLVEEGKRIFEEMGER 734
Query: 350 VKPEDDRGIYRLIHDL 365
K E + Y + DL
Sbjct: 735 HKIEAEVEHYACMVDL 750
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 119/232 (51%), Gaps = 3/232 (1%)
Query: 89 MIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKP 148
+I Y D+ A VFEE ++D S +M++AY + G ++ L LF + ++ ++
Sbjct: 240 LIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYD-VRM 298
Query: 149 DQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAM 208
++V A + L A++G L + G ++H + V+ G + + +L++MY+K G L A
Sbjct: 299 NKVAAASALQAAAYVGDL--VKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQ 356
Query: 209 VFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGL 268
+F + +R+V+SW+A+I Q G +EA+ +F M ++PN +T T VL CA
Sbjct: 357 LFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAA 416
Query: 269 VEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNV 320
G+ +E ++ +++ + K GR A + + + ++ V
Sbjct: 417 SRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPIKDAV 468
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 106/252 (42%), Gaps = 43/252 (17%)
Query: 12 VPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLLNAYVLLSFLD- 70
+P + ++ L+ C + + +H +I G P N L+NAY L D
Sbjct: 1 MPINYTNLLLMLRECKN----FRCLLQVHGSLIVSGLKPH-----NQLINAYSLFQRQDL 51
Query: 71 ACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSS 130
+ ++FD + + V WN+MI G Y G
Sbjct: 52 SRVIFDSVRDPGVVLWNSMIRG-------------------------------YTRAGLH 80
Query: 131 KQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELG 190
++ L F + +GI PD+ + L CA GS+ G +H I + G E + +G
Sbjct: 81 REALGFFGYMSEEKGIDPDKYSFTFALKACA--GSMDFKKGLRIHDLIAEMGLESDVYIG 138
Query: 191 ATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVR 250
LV MY K L +A VF+ M ++V++W ++ G AQ G AL++F MR V
Sbjct: 139 TALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVD 198
Query: 251 PNELTFTGVLSA 262
+ ++ ++ A
Sbjct: 199 IDHVSLYNLIPA 210
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 133/281 (47%), Gaps = 8/281 (2%)
Query: 74 LFDEMPNRNTVTWNTMIVG-YSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQ 132
L EM + V T +V Y ++ D+ AR+VF++ +D V+ ++M+S G S
Sbjct: 125 LIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSA 184
Query: 133 GLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGAT 192
L LF + + D V+ ++ + + + + +HG ++K G+ G
Sbjct: 185 ALLLFHD-MRSCCVDIDHVSLYNLIPAVSKLEKSDVC--RCLHGLVIKKGFIFAFSSG-- 239
Query: 193 LVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPN 252
L++MY L A VFE + ++ SW ++ A GF EE L +F+ MR VR N
Sbjct: 240 LIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMN 299
Query: 253 ELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIK 312
++ L A A+ G + +G G+ V SL+ + K G LE A ++
Sbjct: 300 KVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFI 359
Query: 313 TMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRM-VKP 352
++ + +VV + + +++ ++ Q + A + ++R+ +KP
Sbjct: 360 NIE-DRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKP 399
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 81/156 (51%), Gaps = 6/156 (3%)
Query: 174 VHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGF 233
VHG ++ +G + + +L +N Y+ + ++F+ + + V+ W ++I G + G
Sbjct: 24 VHGSLIVSGLKPHNQL----INAYSLFQRQDLSRVIFDSVRDPGVVLWNSMIRGYTRAGL 79
Query: 234 CEEALVVFEKM-RVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYA 292
EAL F M G+ P++ +FT L ACA + ++G R +I + G+E V+
Sbjct: 80 HREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKKGLRIHDLIAEMGLESDVYIGT 139
Query: 293 SLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLS 328
+LV + K+ L A ++ M V+ +VV + + +S
Sbjct: 140 ALVEMYCKARDLVSARQVFDKMHVK-DVVTWNTMVS 174
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 144 bits (364), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 161/299 (53%), Gaps = 10/299 (3%)
Query: 82 NTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVL 141
+T NT+I Y R D++ A +VF + S + +ISA + + ++ LFR +
Sbjct: 615 DTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKAGREVFQLFRNLK 674
Query: 142 LFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGG 201
L +P+++T +LS +GS G H +++ G++ N + A LV+MY+ G
Sbjct: 675 L----EPNEITFVGLLSASTQLGSTSY--GMQAHCHLIRRGFQANPFVSAALVDMYSSCG 728
Query: 202 VLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRV-AGVRPNELTFTGVL 260
+L VF ++ +W ++I G E+A+ +F+++ + + PN+ +F +L
Sbjct: 729 MLETGMKVFRNSGVNSISAWNSVISAHGFHGMGEKAMELFKELSSNSEMEPNKSSFISLL 788
Query: 261 SACAHAGLVEEGRRYFKMIED-YGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPN 319
SAC+H+G ++EG Y+K +E+ +G++P H +V ++G++G+L EAYE I +
Sbjct: 789 SACSHSGFIDEGLSYYKQMEEKFGVKPVTEHRVWIVDMLGRAGKLREAYEFITGIGEPQK 848
Query: 320 VVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPEDDRGIYRLIHDLYVMGEKWEEAAKL 378
V+G+ LSAC H ++ + V E + M +P D+ Y + + YV WEEA +L
Sbjct: 849 AGVWGALLSACNYHGDTKLGKEVAEVLFEM-EP-DNASYYISLANTYVGLGGWEEAVRL 905
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/360 (25%), Positives = 155/360 (43%), Gaps = 62/360 (17%)
Query: 39 LHAHIIKLGFAPTHLHVANCLLNAYVLLSFL-DACILFDEMPNRNTVTWNTMIVGYSRSG 97
+H + +++ L V N +++ Y A +LF +R+ V+WN+MI +S++G
Sbjct: 415 VHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNG 474
Query: 98 DVQRAREVFEEAPQRDSVS---LSSMISAYNNIGSSKQGL----------------SLFR 138
+A+ +F+E S S LS++++ + SS + S F
Sbjct: 475 FTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSCDSSDSLIFGKSVHCWLQKLGDLTSAFL 534
Query: 139 RVLLFEGIKPDQVTAGAVLSGCA----HM-----------------------------GS 165
R+ + D + +V+SGCA H+ G+
Sbjct: 535 RLETMSETR-DLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGN 593
Query: 166 LGL-LAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTAL 224
LGL L G+ HG +K+ EL+ +L TL+ MY + + +A VF L+ + N+ SW +
Sbjct: 594 LGLVLQGRCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCV 653
Query: 225 ICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGM 284
I +Q E VF+ R + PNE+TF G+LSA G G + + G
Sbjct: 654 ISALSQNKAGRE---VFQLFRNLKLEPNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGF 710
Query: 285 EPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIE 344
+ A+LV + G LE ++ + V ++ + S +SA H M E+ +E
Sbjct: 711 QANPFVSAALVDMYSSCGMLETGMKVFRNSGVN-SISAWNSVISA---HGFHGMGEKAME 766
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 134/282 (47%), Gaps = 29/282 (10%)
Query: 77 EMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSL 136
EM +R N++I Y + G +A +F+ RD VS +SMISA++ G + + +L
Sbjct: 423 EMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNL 482
Query: 137 FRRVLL-FEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVN 195
F+ V+ + K T A+L+ C S L+ GKSVH ++
Sbjct: 483 FKEVVSEYSCSKFSLSTVLAILTSCDSSDS--LIFGKSVHCWL----------------- 523
Query: 196 MYAKGGVLRNAAMVFELMVE-RNVLSWTALICGAAQWGFCEEALVVFEKM-RVAGVRPNE 253
K G L +A + E M E R++ SW ++I G A G E+L F+ M R +R +
Sbjct: 524 --QKLGDLTSAFLRLETMSETRDLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDL 581
Query: 254 LTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKT 313
+T G +SA + GLV +GR + + E +L+ + G+ +E A ++
Sbjct: 582 ITLLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGL 641
Query: 314 MKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPEDD 355
+ +PN+ + +SA ++K A R + Q+ R +K E +
Sbjct: 642 IS-DPNLCSWNCVISALSQNK----AGREVFQLFRNLKLEPN 678
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 78/360 (21%), Positives = 159/360 (44%), Gaps = 58/360 (16%)
Query: 1 MHLYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAP-THLHVANCL 59
+ + + +G D+ + +C+S + LT+ + LH +IK G++P H+ V N
Sbjct: 274 LQYFKSMTGSGQEADTVTFSCVISACSS-IEELTLGESLHGLVIKSGYSPEAHVSVGN-- 330
Query: 60 LNAYVLLSFLDACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSS 119
++I YS+ GD + A VFEE RD +S ++
Sbjct: 331 ----------------------------SIISMYSKCGDTEAAETVFEELVCRDVISSNA 362
Query: 120 MISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGL-LAGKSVHGFI 178
+++ + G ++ + ++ + I+PD T ++ S C G L G++VHG+
Sbjct: 363 ILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSIC---GDLSFSREGRAVHGYT 419
Query: 179 VKNGWELNA-ELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEA 237
V+ + A E+ ++++MY K G+ A ++F+ R+++SW ++I +Q GF +A
Sbjct: 420 VRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKA 479
Query: 238 LVVFEKM--RVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLV 295
+F+++ + + + T +L++C + + G+ VH +
Sbjct: 480 KNLFKEVVSEYSCSKFSLSTVLAILTSCDSSDSLIFGK-------------SVHCW---- 522
Query: 296 YLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPEDD 355
+ K G L A+ ++TM ++ + S +S C + R + + R K D
Sbjct: 523 --LQKLGDLTSAFLRLETMSETRDLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHD 580
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 129/277 (46%), Gaps = 6/277 (2%)
Query: 81 RNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRV 140
++ T + ++ Y R+G++ + +F+E ++D + +SMI+A N G + LF
Sbjct: 120 QDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNGRYIAAVGLFIE- 178
Query: 141 LLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKG 200
++ +G + D T S A +H ++ G ++ L L+N+YAKG
Sbjct: 179 MIHKGNEFDSTTLLLAAS--ALSSLHLSRKCSMLHCLAIETGLVGDSSLCNALMNLYAKG 236
Query: 201 GVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVL 260
L +A VF M R+++SW ++ G ++L F+ M +G + +TF+ V+
Sbjct: 237 ENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVI 296
Query: 261 SACAHAGLVEEGRRYFKMIEDYGMEPKVHHYA--SLVYLVGKSGRLEEAYEIIKTMKVEP 318
SAC+ + G ++ G P+ H S++ + K G E A + + + V
Sbjct: 297 SACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEEL-VCR 355
Query: 319 NVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPEDD 355
+V+ + L+ + FE A ++ Q+ + K + D
Sbjct: 356 DVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPD 392
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 138 bits (348), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 80/234 (34%), Positives = 131/234 (55%), Gaps = 6/234 (2%)
Query: 78 MPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLF 137
+PN + VT +++V YS+ G + +F+ QR+ + ++MI Y + G+ +F
Sbjct: 450 LPNVSLVT--SLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVF 507
Query: 138 RRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMY 197
R ++L +PD VT G VL+ C+ + +L L GK +HG I+K +E + A ++ MY
Sbjct: 508 R-LMLLSKHRPDSVTMGRVLTVCSDLKALKL--GKELHGHILKKEFESIPFVSARIIKMY 564
Query: 198 AKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFT 257
K G LR+A F+ + + L+WTA+I +A+ FE+M G PN TFT
Sbjct: 565 GKCGDLRSANFSFDAVAVKGSLTWTAIIEAYGCNELFRDAINCFEQMVSRGFTPNTFTFT 624
Query: 258 GVLSACAHAGLVEEGRRYFK-MIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEI 310
VLS C+ AG V+E R+F M+ Y ++P HY+ ++ L+ + GR+EEA +
Sbjct: 625 AVLSICSQAGFVDEAYRFFNLMLRMYNLQPSEEHYSLVIELLNRCGRVEEAQRL 678
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 135/307 (43%), Gaps = 46/307 (14%)
Query: 82 NTVTWNTMIVG-YSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRV 140
N+V T +V Y + G V AR VF+E +RD V +MI+ + + L LFR +
Sbjct: 247 NSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTM 306
Query: 141 LLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKN-GWELNAELGATLVNMYAK 199
+ E I P+ V +L + +L L GK VH ++K+ + + + L+++Y K
Sbjct: 307 ISEEKIYPNSVILTTILPVLGDVKALKL--GKEVHAHVLKSKNYVEQPFVHSGLIDLYCK 364
Query: 200 GGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGV 259
G + + VF +RN +SWTAL+ G A G ++AL M+ G RP+ +T V
Sbjct: 365 CGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATV 424
Query: 260 LSACAHAGLVEEGRRYFKMIEDYGME----PKVHHYASLVYLVGKSG----------RLE 305
L CA +++G K I Y ++ P V SL+ + K G RLE
Sbjct: 425 LPVCAELRAIKQG----KEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLE 480
Query: 306 ------------------------EAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAER 341
E + ++ K P+ V G L+ C + K ++ +
Sbjct: 481 QRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKE 540
Query: 342 VIEQVLR 348
+ +L+
Sbjct: 541 LHGHILK 547
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 92/194 (47%), Gaps = 5/194 (2%)
Query: 144 EGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVL 203
GI + T A+L C SL L GK VH I NG E N L LV+MY G +
Sbjct: 105 RGIPVNATTFSALLEACVRRKSL--LHGKQVHVHIRINGLESNEFLRTKLVHMYTACGSV 162
Query: 204 RNAAMVFELMVERNVLSWTALICGAAQWG--FCEEALVVFEKMRVAGVRPNELTFTGVLS 261
++A VF+ NV SW AL+ G G ++ L F +MR GV N + + V
Sbjct: 163 KDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLNVYSLSNVFK 222
Query: 262 ACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVV 321
+ A A + +G + + G+ V SLV + K G++ A + + VE ++V
Sbjct: 223 SFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEI-VERDIV 281
Query: 322 VFGSFLSACKEHKQ 335
V+G+ ++ +K+
Sbjct: 282 VWGAMIAGLAHNKR 295
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 141/261 (54%), Gaps = 14/261 (5%)
Query: 80 NRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQ-RDSVSLSSMISAYNNIGSSKQGLSLFR 138
+ N + N ++ Y + G +Q A F + + RD VS +++++ +G S+Q LS F
Sbjct: 427 DTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQALSFF- 485
Query: 139 RVLLFEGI----KPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLV 194
EG+ KP + T +L+GCA++ +L L GK++HGF++++G++++ + +V
Sbjct: 486 -----EGMQVEAKPSKYTLATLLAGCANIPALNL--GKAIHGFLIRDGYKIDVVIRGAMV 538
Query: 195 NMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNEL 254
+MY+K A VF+ R+++ W ++I G + G +E +F + GV+P+ +
Sbjct: 539 DMYSKCRCFDYAIEVFKEAATRDLILWNSIIRGCCRNGRSKEVFELFMLLENEGVKPDHV 598
Query: 255 TFTGVLSACAHAGLVEEGRRYF-KMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKT 313
TF G+L AC G VE G +YF M Y + P+V HY ++ L K G L + E +
Sbjct: 599 TFLGILQACIREGHVELGFQYFSSMSTKYHISPQVEHYDCMIELYCKYGCLHQLEEFLLL 658
Query: 314 MKVEPNVVVFGSFLSACKEHK 334
M +P + + AC+ ++
Sbjct: 659 MPFDPPMQMLTRINDACQRYR 679
Score = 118 bits (296), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 94/350 (26%), Positives = 174/350 (49%), Gaps = 42/350 (12%)
Query: 25 SCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLLNAYVLLSFLDACI-LFDEMPNRNT 83
+C+ L +L + + +HA +KL + V+ + + YV L++ +FD+ +++
Sbjct: 272 ACSRSL-ALEVGKVIHAIAVKLSVVADTV-VSTSVFDMYVKCDRLESARRVFDQTRSKDL 329
Query: 84 VTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLF 143
+W + + GY+ SG + ARE+F+ P+R+ VS ++M+ Y + + L F ++
Sbjct: 330 KSWTSAMSGYAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALD-FLTLMRQ 388
Query: 144 EGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVL 203
E D VT +L+ C+ + + + GK HGFI ++G++ N + L++MY K G L
Sbjct: 389 EIENIDNVTLVWILNVCSGISDVQM--GKQAHGFIYRHGYDTNVIVANALLDMYGKCGTL 446
Query: 204 RNAAMVFELMVE-RNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSA 262
++A + F M E R+ +SW AL+ G A+ G E+AL FE M+V +P++ T +L+
Sbjct: 447 QSANIWFRQMSELRDEVSWNALLTGVARVGRSEQALSFFEGMQVEA-KPSKYTLATLLAG 505
Query: 263 CA-----------HAGLVEEGRRYFKMIE-------------DYGME-------PKVHHY 291
CA H L+ +G + +I DY +E + +
Sbjct: 506 CANIPALNLGKAIHGFLIRDGYKIDVVIRGAMVDMYSKCRCFDYAIEVFKEAATRDLILW 565
Query: 292 ASLVYLVGKSGRLEEAYEIIKTMK---VEPNVVVFGSFLSACKEHKQFEM 338
S++ ++GR +E +E+ ++ V+P+ V F L AC E+
Sbjct: 566 NSIIRGCCRNGRSKEVFELFMLLENEGVKPDHVTFLGILQACIREGHVEL 615
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 139/289 (48%), Gaps = 9/289 (3%)
Query: 87 NTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGI 146
N I Y + G V ARE+FEE P+RD S +++I+A G S + +FRR + +G+
Sbjct: 100 NRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRR-MNRDGV 158
Query: 147 KPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNA 206
+ + + VL C + L LL + +H +VK G+ N +L ++V++Y K V+ +A
Sbjct: 159 RATETSFAGVLKSCGLILDLRLL--RQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDA 216
Query: 207 AMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHA 266
VF+ +V + +SW ++ + GF +EA+V+F KM VRP T + V+ AC+ +
Sbjct: 217 RRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRS 276
Query: 267 GLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSF 326
+E G+ + + S+ + K RLE A + + + S+
Sbjct: 277 LALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKD----LKSW 332
Query: 327 LSACKEHKQFEMAERVIEQVLRMVKPEDDRGIYRLIHDLYVMGEKWEEA 375
SA + + E L + PE + + + YV +W+EA
Sbjct: 333 TSAMSGYAMSGLTREARE--LFDLMPERNIVSWNAMLGGYVHAHEWDEA 379
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 86/386 (22%), Positives = 152/386 (39%), Gaps = 74/386 (19%)
Query: 2 HLYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLLN 61
++ +++R GV LKSC L L +++ LH ++K G++
Sbjct: 148 RMFRRMNRDGVRATETSFAGVLKSCGLIL-DLRLLRQLHCAVVKYGYS------------ 194
Query: 62 AYVLLSFLDACILFDEMPNRNTVTWNTMIVG-YSRSGDVQRAREVFEEAPQRDSVSLSSM 120
V T IV Y + + AR VF+E VS + +
Sbjct: 195 --------------------GNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVI 234
Query: 121 ISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVK 180
+ Y +G + + + +F ++L ++P T +V+ C+ SL L GK +H VK
Sbjct: 235 VRRYLEMGFNDEAVVMFFKMLEL-NVRPLNHTVSSVMLACSR--SLALEVGKVIHAIAVK 291
Query: 181 NGWELNAELGATLVNMYAK-------------------------------GGVLRNAAMV 209
+ + ++ +MY K G+ R A +
Sbjct: 292 LSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREAREL 351
Query: 210 FELMVERNVLSWTALICG---AAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHA 266
F+LM ERN++SW A++ G A +W +EAL MR + +T +L+ C+
Sbjct: 352 FDLMPERNIVSWNAMLGGYVHAHEW---DEALDFLTLMRQEIENIDNVTLVWILNVCSGI 408
Query: 267 GLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSF 326
V+ G++ I +G + V +L+ + GK G L+ A + M + V + +
Sbjct: 409 SDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNAL 468
Query: 327 LSACKEHKQFEMAERVIEQVLRMVKP 352
L+ + E A E + KP
Sbjct: 469 LTGVARVGRSEQALSFFEGMQVEAKP 494
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 116/450 (25%), Positives = 203/450 (45%), Gaps = 77/450 (17%)
Query: 1 MHLYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLL 60
+ L+ ++HR S L +C S L + +HA +IK G A T L+
Sbjct: 69 LALFLQIHRASPDLSSHTFTPVLGAC-SLLSYPETGRQVHALMIKQG-AETGTISKTALI 126
Query: 61 NAYVLLSFL-DACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVF------------- 106
+ Y L D+ +F+ + ++ V+WN ++ G+ R+G + A VF
Sbjct: 127 DMYSKYGHLVDSVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRERVEISEF 186
Query: 107 ---------------EEAPQ---------RDSVSL-SSMISAYNNIGSSKQGLSLFRRV- 140
++ Q RD V L ++MIS Y+++G + + ++ +
Sbjct: 187 TLSSVVKTCASLKILQQGKQVHAMVVVTGRDLVVLGTAMISFYSSVGLINEAMKVYNSLN 246
Query: 141 -------------------------LLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVH 175
LL +P+ + L+GC+ L + GK +H
Sbjct: 247 VHTDEVMLNSLISGCIRNRNYKEAFLLMSRQRPNVRVLSSSLAGCSDNSDLWI--GKQIH 304
Query: 176 GFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCE 235
++NG+ +++L L++MY K G + A +F + ++V+SWT++I A G
Sbjct: 305 CVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNGDGV 364
Query: 236 EALVVFEKM--RVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMI-EDYGMEPKVHHYA 292
+AL +F +M +GV PN +TF V+SACAHAGLV+EG+ F M+ E Y + P HY
Sbjct: 365 KALEIFREMCEEGSGVLPNSVTFLVVISACAHAGLVKEGKECFGMMKEKYRLVPGTEHYV 424
Query: 293 SLVYLVGKSGRLEEAYEIIKTMKVEPN----VVVFGSFLSACKEHKQFEMAERVIEQVLR 348
+ ++ K+G EE + +++ M N ++ + LSAC + E V +++
Sbjct: 425 CFIDILSKAGETEEIWRLVERMMENDNQSIPCAIWVAVLSACSLNMDLTRGEYVARRLME 484
Query: 349 MVKPEDDRGIYRLIHDLYVMGEKWEEAAKL 378
PE + IY L+ + Y KW+ +L
Sbjct: 485 ETGPE-NASIYVLVSNFYAAMGKWDVVEEL 513
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 121/240 (50%), Gaps = 8/240 (3%)
Query: 102 AREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPD--QVTAGAVLSG 159
A +F+E PQRD SL+S +S++ G+ L+LF L PD T VL
Sbjct: 37 ADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTLALF---LQIHRASPDLSSHTFTPVLGA 93
Query: 160 CAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVL 219
C+ + G+ VH ++K G E L++MY+K G L ++ VFE + E++++
Sbjct: 94 CSLLSYPE--TGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLV 151
Query: 220 SWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMI 279
SW AL+ G + G +EAL VF M V +E T + V+ CA ++++G++ M+
Sbjct: 152 SWNALLSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVHAMV 211
Query: 280 EDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMA 339
G + V A ++ G + EA ++ ++ V + V+ S +S C ++ ++ A
Sbjct: 212 VVTGRDLVVLGTA-MISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRNRNYKEA 270
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 135 bits (341), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 102/384 (26%), Positives = 176/384 (45%), Gaps = 47/384 (12%)
Query: 1 MHLYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLL 60
M +Y +L R P S T+ + LH + KLG+ + + V LL
Sbjct: 386 MLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERS-VFVGTTLL 444
Query: 61 NAYVLLSFLD-ACILFDEMPNRNTVTWNTMIVGYSRSGD----VQRAREVFEEAPQRDSV 115
+ Y + A +FD M R+ V W MIVG+SR G+ VQ E++ E + D
Sbjct: 445 SMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGF 504
Query: 116 SLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVH 175
SLSS+I A C+ M L G+ H
Sbjct: 505 SLSSVIGA------------------------------------CSDMAMLR--QGEVFH 526
Query: 176 GFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCE 235
++ G++ + LV+MY K G A +F L ++ W +++ +Q G E
Sbjct: 527 CLAIRTGFDCVMSVCGALVDMYGKNGKYETAETIFSLASNPDLKCWNSMLGAYSQHGMVE 586
Query: 236 EALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLV 295
+AL FE++ G P+ +T+ +L+AC+H G +G+ + +++ G++ HY+ +V
Sbjct: 587 KALSFFEQILENGFMPDAVTYLSLLAACSHRGSTLQGKFLWNQMKEQGIKAGFKHYSCMV 646
Query: 296 YLVGKSGRLEEAYEIIKTMKVEPNVV-VFGSFLSACKEHKQFEMAERVIEQVLRMVKPED 354
LV K+G ++EA E+I+ N ++ + LSAC + ++ EQ+L++ PED
Sbjct: 647 NLVSKAGLVDEALELIEQSPPGNNQAELWRTLLSACVNTRNLQIGLYAAEQILKL-DPED 705
Query: 355 DRGIYRLIHDLYVMGEKWEEAAKL 378
+ L+ +LY + +WE+ A++
Sbjct: 706 T-ATHILLSNLYAVNGRWEDVAEM 728
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 141/274 (51%), Gaps = 8/274 (2%)
Query: 82 NTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVL 141
N V +++ YS GD++ AR +F+ RD+V+ ++MI + GL FR +L
Sbjct: 233 NVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNML 292
Query: 142 LFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGG 201
+ G+ P Q T VL+GC+ +GS L GK +H I+ + + L L++MY G
Sbjct: 293 M-SGVDPTQFTYSIVLNGCSKLGSYSL--GKLIHARIIVSDSLADLPLDNALLDMYCSCG 349
Query: 202 VLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEK-MRVAGVRPNELTFTGVL 260
+R A VF + N++SW ++I G ++ GF E+A++++ + +R++ RP+E TF+ +
Sbjct: 350 DMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAI 409
Query: 261 SACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNV 320
SA A G+ + G E V +L+ + K+ E A ++ MK E +V
Sbjct: 410 SATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQKVFDVMK-ERDV 468
Query: 321 VVFGSFLSACKEHKQFEMAERVIEQVLRMVKPED 354
V++ + H + +E ++ + M + ++
Sbjct: 469 VLWTEMIVG---HSRLGNSELAVQFFIEMYREKN 499
Score = 115 bits (287), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 134/261 (51%), Gaps = 3/261 (1%)
Query: 87 NTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGI 146
N ++ Y GD++ A VF + VS +S+IS + G +Q + ++RR+L
Sbjct: 339 NALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTP 398
Query: 147 KPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNA 206
+PD+ T A +S A + GK +HG + K G+E + +G TL++MY K +A
Sbjct: 399 RPDEYTFSAAISATAEPERF--VHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESA 456
Query: 207 AMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHA 266
VF++M ER+V+ WT +I G ++ G E A+ F +M R + + + V+ AC+
Sbjct: 457 QKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGACSDM 516
Query: 267 GLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSF 326
++ +G + + G + + +LV + GK+G+ E A E I ++ P++ + S
Sbjct: 517 AMLRQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETA-ETIFSLASNPDLKCWNSM 575
Query: 327 LSACKEHKQFEMAERVIEQVL 347
L A +H E A EQ+L
Sbjct: 576 LGAYSQHGMVEKALSFFEQIL 596
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 139/270 (51%), Gaps = 5/270 (1%)
Query: 87 NTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYN-NIGSSKQGLSLFRRVLLFEG 145
N +I Y R G +++AR+VF++ P R+ VS +++ SAY+ N + L + FE
Sbjct: 136 NNLISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTH-MAFEY 194
Query: 146 IKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRN 205
+KP+ T +++ CA + + L G S++ I+K G+ N + +++ MY+ G L +
Sbjct: 195 VKPNSSTFTSLVQVCAVLEDV--LMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLES 252
Query: 206 AAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAH 265
A +F+ + R+ ++W +I G+ + E+ L+ F M ++GV P + T++ VL+ C+
Sbjct: 253 ARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSK 312
Query: 266 AGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGS 325
G G+ I + +L+ + G + EA+ + + PN+V + S
Sbjct: 313 LGSYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIH-NPNLVSWNS 371
Query: 326 FLSACKEHKQFEMAERVIEQVLRMVKPEDD 355
+S C E+ E A + ++LRM P D
Sbjct: 372 IISGCSENGFGEQAMLMYRRLLRMSTPRPD 401
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 111/253 (43%), Gaps = 15/253 (5%)
Query: 87 NTMIVGYSRSGDVQRAREVFEEAPQRDSVSLS--SMISAYNNIGSS--KQGLSLFRRVLL 142
N +I Y R +++AR+VF++ PQR+ V+L S + Y ++GSS Q + L ++
Sbjct: 26 NNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQIIKLGSFQMI 85
Query: 143 FEGIKPDQVTAGAVLSGCAHMGSLGLLA-GKSVHGFIVKNGWELNAE---LGATLVNMYA 198
F P A +V+ S+ +L + +H ++ G E L++MY
Sbjct: 86 F--FMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMYV 143
Query: 199 KGGVLRNAAMVFELMVERNVLSWTALICGAAQ-WGFCEEALVVFEKMRVAGVRPNELTFT 257
+ G L A VF+ M RNV+S+ AL ++ F A + M V+PN TFT
Sbjct: 144 RCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFT 203
Query: 258 GVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMK-- 315
++ CA V G I G V S++ + G LE A I +
Sbjct: 204 SLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNR 263
Query: 316 --VEPNVVVFGSF 326
V N ++ GS
Sbjct: 264 DAVAWNTMIVGSL 276
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 127 bits (320), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 101/381 (26%), Positives = 174/381 (45%), Gaps = 43/381 (11%)
Query: 1 MHLYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLL 60
+ L++ + + GV F + + +C + + + +H IK G A
Sbjct: 402 LKLFTDMLQRGVELTDFSLTSAVDAC-GLVSEKKVSEQIHGFCIKFGTA----------F 450
Query: 61 NAYVLLSFLDACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQR--DSVSLS 118
N + + LD C + M + A E+F++ P S + +
Sbjct: 451 NPCIQTALLDMCTRCERMAD---------------------AEEMFDQWPSNLDSSKATT 489
Query: 119 SMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLA-GKSVHGF 177
S+I Y G + +SLF R L + + D+V+ +L+ C G+LG G +H +
Sbjct: 490 SIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVC---GTLGFREMGYQIHCY 546
Query: 178 IVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEA 237
+K G+ + LG +L++MYAK +A +F M E +V+SW +LI +EA
Sbjct: 547 ALKAGYFSDISLGNSLISMYAKCCDSDDAIKIFNTMREHDVISWNSLISCYILQRNGDEA 606
Query: 238 LVVFEKMRVAGVRPNELTFTGVLSACAH--AGLVEEGRRYF-KMIEDYGMEPKVHHYASL 294
L ++ +M ++P+ +T T V+SA + + + R F M Y +EP HY +
Sbjct: 607 LALWSRMNEKEIKPDIITLTLVISAFRYTESNKLSSCRDLFLSMKTIYDIEPTTEHYTAF 666
Query: 295 VYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPED 354
V ++G G LEEA + I +M V+P V V + L +C+ H +A+RV + +L KPE
Sbjct: 667 VRVLGHWGLLEEAEDTINSMPVQPEVSVLRALLDSCRIHSNTSVAKRVAKLILS-TKPET 725
Query: 355 DRGIYRLIHDLYVMGEKWEEA 375
Y L ++Y W +
Sbjct: 726 PSE-YILKSNIYSASGFWHRS 745
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 127/276 (46%), Gaps = 15/276 (5%)
Query: 75 FDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGL 134
F ++ T N +I Y + G + A VF VS +++IS ++ + + L
Sbjct: 106 FLKLREEKTRLGNALISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFSRLNLEIEAL 165
Query: 135 SLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLV 194
+F R+ ++P++ T A+L+ C + L G +HG IVK+G+ + + +L+
Sbjct: 166 KVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSL--GIQIHGLIVKSGFLNSVFVSNSLM 223
Query: 195 NMYAK--GGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKM-RVAGVRP 251
++Y K G + +F+ + +R+V SW ++ + G +A +F +M RV G
Sbjct: 224 SLYDKDSGSSCDDVLKLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGV 283
Query: 252 NELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGK---SGRLEEAY 308
+ T + +LS+C + ++ GR G+ ++ +L+ K ++E Y
Sbjct: 284 DSFTLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLY 343
Query: 309 EIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIE 344
E M + + V F ++A + F M + +E
Sbjct: 344 E----MMMAQDAVTFTEMITA---YMSFGMVDSAVE 372
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 88/201 (43%), Gaps = 36/201 (17%)
Query: 104 EVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHM 163
++F+E PQRD S ++++S+ G S + LF + EG D T +LS C
Sbjct: 239 KLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCT-- 296
Query: 164 GSLGLLAGKSVHGFIVKNG------------------WELN----------AELGATLVN 195
S LL G+ +HG ++ G W++ A+ T
Sbjct: 297 DSSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTE 356
Query: 196 M---YAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPN 252
M Y G++ +A +F + E+N +++ AL+ G + G +AL +F M GV
Sbjct: 357 MITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELT 416
Query: 253 ELTFTGVLSACAHAGLVEEGR 273
+ + T + AC GLV E +
Sbjct: 417 DFSLTSAVDAC---GLVSEKK 434
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 80/173 (46%), Gaps = 7/173 (4%)
Query: 172 KSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQW 231
K+VH +K E LG L++ Y K G R A +VF + V+S+TALI G ++
Sbjct: 100 KAVHASFLKLREE-KTRLGNALISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFSRL 158
Query: 232 GFCEEALVVFEKMRVAG-VRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHH 290
EAL VF +MR AG V+PNE TF +L+AC G + +I G V
Sbjct: 159 NLEIEALKVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFV 218
Query: 291 YASLVYLVGKSG-----RLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEM 338
SL+ L K + + ++ I V V S + K HK F++
Sbjct: 219 SNSLMSLYDKDSGSSCDDVLKLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDL 271
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 124 bits (312), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 158/299 (52%), Gaps = 13/299 (4%)
Query: 87 NTMIVG-----YSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVL 141
N++++G +S+ + + ++F E + DSV +SMI +Y+ + L LF +
Sbjct: 269 NSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSYSWHCCGEDALRLFI-LA 327
Query: 142 LFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGG 201
+ + ++PD+ T +VLS M ++ L G VH ++K G++L+ + +L+ MY K G
Sbjct: 328 MTQSVRPDKFTFSSVLSS---MNAVMLDHGADVHSLVIKLGFDLDTAVATSLMEMYFKTG 384
Query: 202 VLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRV-AGVRPNELTFTGVL 260
+ A VF ++++ W +I G A+ E+L +F ++ + ++P+ +T G+L
Sbjct: 385 SVDLAMGVFAKTDGKDLIFWNTVIMGLARNSRAVESLAIFNQLLMNQSLKPDRVTLMGIL 444
Query: 261 SACAHAGLVEEGRRYFKMIED-YGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPN 319
AC +AG V EG + F +E +G+ P HYA ++ L+ + G + EA +I + EP+
Sbjct: 445 VACCYAGFVNEGIQIFSSMEKAHGVNPGNEHYACIIELLCRVGMINEAKDIADKIPFEPS 504
Query: 320 VVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPEDDRGIYRLIHDLYVMGEKWEEAAKL 378
++ L A + +AE V + +L +P+ Y ++ +Y M +WE + KL
Sbjct: 505 SHIWEPILCASLDLGDTRLAETVAKTMLE-SEPKSSFP-YLVLIKIYEMTWRWENSVKL 561
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 167/326 (51%), Gaps = 13/326 (3%)
Query: 32 SLTIIQHLHAHIIKLGFAPTHLHVANCLLNAYVLLSFLDACILFDEMPNRNTVTWNTMIV 91
S T+ + +HA +++ GF T CL + S ++A LFD++P++NT+TWN +
Sbjct: 19 SPTLAKIVHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQLFDDIPDKNTITWNVCLK 78
Query: 92 GYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQV 151
G ++G + A ++F+E P+RD VS ++MIS + G + G+ +F + +E I+P +
Sbjct: 79 GLFKNGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQRWE-IRPTEF 137
Query: 152 TAG--AVLSGCAHMGSLGLLAGKSVHGFIVKNG-WELNAELGATLVNMYAKGGVLRNAAM 208
T A L C G+ +HG + +G N + ++++MY + GV A
Sbjct: 138 TFSILASLVTCVR-------HGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALS 190
Query: 209 VFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGL 268
VF M +R+V+SW LI + G E AL F MR ++P+E T + V+S C+
Sbjct: 191 VFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRE 250
Query: 269 VEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLS 328
+ +G++ + G + + + K RL+++ ++ + ++ + + V+ S +
Sbjct: 251 LSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELE-KWDSVLCNSMIG 309
Query: 329 ACKEHKQFEMAERV-IEQVLRMVKPE 353
+ H E A R+ I + + V+P+
Sbjct: 310 SYSWHCCGEDALRLFILAMTQSVRPD 335
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 124 bits (312), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 147/283 (51%), Gaps = 18/283 (6%)
Query: 59 LLNAYVLLSFLDAC--------------ILFDEMPNRNTVTWNTMIVGYSRSGDVQRARE 104
L N + + S L AC ++ M + +++ Y++ G++ R+
Sbjct: 281 LPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRK 340
Query: 105 VFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMG 164
VF+ R++V+ +S+I+A+ G ++ +SLFR ++ + + +T ++L C +G
Sbjct: 341 VFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFR-IMKRRHLIANNLTVVSILRACGSVG 399
Query: 165 SLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTAL 224
+L L GK +H I+KN E N +G+TLV +Y K G R+A V + + R+V+SWTA+
Sbjct: 400 AL--LLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAM 457
Query: 225 ICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGM 284
I G + G EAL ++M GV PN T++ L ACA++ + GR + +
Sbjct: 458 ISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHA 517
Query: 285 EPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFL 327
V ++L+++ K G + EA+ + +M E N+V + + +
Sbjct: 518 LSNVFVGSALIHMYAKCGFVSEAFRVFDSMP-EKNLVSWKAMI 559
Score = 118 bits (296), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 133/270 (49%), Gaps = 35/270 (12%)
Query: 1 MHLYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLL 60
+ L+ + R + ++ +V L++C S + +L + + LHA IIK
Sbjct: 370 ISLFRIMKRRHLIANNLTVVSILRACGS-VGALLLGKELHAQIIKNSI------------ 416
Query: 61 NAYVLLSFLDACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSM 120
+N +T++ Y + G+ + A V ++ P RD VS ++M
Sbjct: 417 -------------------EKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAM 457
Query: 121 ISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVK 180
IS +++G + L F + ++ EG++P+ T + L CA+ S LL G+S+H K
Sbjct: 458 ISGCSSLGHESEALD-FLKEMIQEGVEPNPFTYSSALKACAN--SESLLIGRSIHSIAKK 514
Query: 181 NGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVV 240
N N +G+ L++MYAK G + A VF+ M E+N++SW A+I G A+ GFC EAL +
Sbjct: 515 NHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKL 574
Query: 241 FEKMRVAGVRPNELTFTGVLSACAHAGLVE 270
+M G ++ F +LS C L E
Sbjct: 575 MYRMEAEGFEVDDYIFATILSTCGDIELDE 604
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 132/249 (53%), Gaps = 4/249 (1%)
Query: 82 NTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVL 141
N + ++++ Y++ G++ A F+ ++D +S +++ISA + G + + +F +
Sbjct: 217 NLIVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIG-M 275
Query: 142 LFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGG 201
L P++ T ++L C+ +L G+ VH +VK + + +G +L++MYAK G
Sbjct: 276 LNHWFLPNEFTVCSILKACSEEKALRF--GRQVHSLVVKRMIKTDVFVGTSLMDMYAKCG 333
Query: 202 VLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLS 261
+ + VF+ M RN ++WT++I A+ GF EEA+ +F M+ + N LT +L
Sbjct: 334 EISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILR 393
Query: 262 ACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVV 321
AC G + G+ I +E V+ ++LV+L K G +A+ +++ + +VV
Sbjct: 394 ACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLP-SRDVV 452
Query: 322 VFGSFLSAC 330
+ + +S C
Sbjct: 453 SWTAMISGC 461
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 124/244 (50%), Gaps = 6/244 (2%)
Query: 87 NTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGI 146
N +I R GD+ AR+VF+ P++++V+ ++MI Y G + +LF + GI
Sbjct: 121 NNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVK-HGI 179
Query: 147 K-PDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRN 205
+ ++ +L+ C+ L G+ VHG +VK G N + ++LV YA+ G L +
Sbjct: 180 RFTNERMFVCLLNLCSRRAEFEL--GRQVHGNMVKVGVG-NLIVESSLVYFYAQCGELTS 236
Query: 206 AAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAH 265
A F++M E++V+SWTA+I ++ G +A+ +F M PNE T +L AC+
Sbjct: 237 ALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSE 296
Query: 266 AGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGS 325
+ GR+ ++ ++ V SL+ + K G + + ++ M N V + S
Sbjct: 297 EKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMS-NRNTVTWTS 355
Query: 326 FLSA 329
++A
Sbjct: 356 IIAA 359
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 81/167 (48%), Gaps = 3/167 (1%)
Query: 165 SLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTAL 224
S G+ K +H +K + G L++ + G L A VF+ M E+N ++WTA+
Sbjct: 95 SNGMRLIKRIHAMALKCFDDQVIYFGNNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAM 154
Query: 225 ICGAAQWGFCEEALVVFEKMRVAGVR-PNELTFTGVLSACAHAGLVEEGRRYFKMIEDYG 283
I G ++G +EA +FE G+R NE F +L+ C+ E GR+ + G
Sbjct: 155 IDGYLKYGLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVG 214
Query: 284 MEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSAC 330
+ + +SLVY + G L A M+ E +V+ + + +SAC
Sbjct: 215 VGNLIVE-SSLVYFYAQCGELTSALRAFDMME-EKDVISWTAVISAC 259
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 87/360 (24%), Positives = 171/360 (47%), Gaps = 44/360 (12%)
Query: 1 MHLYSKLHRTGV-----PFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHV 55
+ L+SK+ G PF SF L C+ + + + +H +++K+GF + LHV
Sbjct: 300 LDLFSKMQFWGKRPSIRPFMSF-----LNFCSRN-SDIQSGKQIHCYVLKMGFDVSSLHV 353
Query: 56 ANCLLNAYVLLSFLDACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSV 115
+ L++ Y + ++ + +++ P +
Sbjct: 354 QSALIDMY------------------------------GKCNGIENSALLYQSLPCLNLE 383
Query: 116 SLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVH 175
+S++++ + G +K + +F +++ EG D+VT VL + L + VH
Sbjct: 384 CCNSLMTSLMHCGITKDIIEMFG-LMIDEGTGIDEVTLSTVLKALSLSLPESLHSCTLVH 442
Query: 176 GFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCE 235
+K+G+ + + +L++ Y K G + VF+ + N+ T++I G A+ G
Sbjct: 443 CCAIKSGYAADVAVSCSLIDAYTKSGQNEVSRKVFDELDTPNIFCLTSIINGYARNGMGT 502
Query: 236 EALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIED-YGMEPKVHHYASL 294
+ + + +M + P+E+T VLS C+H+GLVEEG F +E YG+ P YA +
Sbjct: 503 DCVKMLREMDRMNLIPDEVTILSVLSGCSHSGLVEEGELIFDSLESKYGISPGRKLYACM 562
Query: 295 VYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPED 354
V L+G++G +E+A ++ + + + V + S L +C+ H+ + R E VL ++PE+
Sbjct: 563 VDLLGRAGLVEKAERLLLQARGDADCVAWSSLLQSCRIHRNETIGRRAAE-VLMNLEPEN 621
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 146/323 (45%), Gaps = 42/323 (13%)
Query: 1 MHLYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLL 60
+ LY+++ G+ + L C+ L IQ +H +I LGF ++ V + L+
Sbjct: 97 IELYAEMVSCGLRESASTFPSVLSVCSDELFCREGIQ-VHCRVISLGFG-CNMFVRSALV 154
Query: 61 NAYVLLSFLDACI-LFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSS 119
Y L +D + LFDEM +RN N ++ + ++G+ +R EV+
Sbjct: 155 GLYACLRLVDVALKLFDEMLDRNLAVCNLLLRCFCQTGESKRLFEVYLRME--------- 205
Query: 120 MISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIV 179
EG+ + +T ++ GC+H + GK +H +V
Sbjct: 206 -----------------------LEGVAKNGLTYCYMIRGCSH--DRLVYEGKQLHSLVV 240
Query: 180 KNGWEL-NAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEAL 238
K+GW + N + LV+ Y+ G L + F + E++V+SW +++ A +G ++L
Sbjct: 241 KSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVLDSL 300
Query: 239 VVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGME-PKVHHYASLVYL 297
+F KM+ G RP+ F L+ C+ ++ G++ + G + +H ++L+ +
Sbjct: 301 DLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSALIDM 360
Query: 298 VGKSGRLEEA---YEIIKTMKVE 317
GK +E + Y+ + + +E
Sbjct: 361 YGKCNGIENSALLYQSLPCLNLE 383
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/327 (22%), Positives = 141/327 (43%), Gaps = 38/327 (11%)
Query: 58 CLLNAYVLLSFLDACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSL 117
C L ++ +D +E P+ T N I +SG++ A E F+E RD V+
Sbjct: 21 CSLTPFIATPRMDFSSFLEENPSDLVYTHNRRIDELIKSGNLLSAHEAFDEMSVRDVVTY 80
Query: 118 SSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGF 177
+ +IS + G S + + L+ ++ G++ T +VLS C+ L G VH
Sbjct: 81 NLLISGNSRYGCSLRAIELYAE-MVSCGLRESASTFPSVLSVCSD--ELFCREGIQVHCR 137
Query: 178 IVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEA 237
++ G+ N + + LV +YA ++ A +F+ M++RN+ L+ Q G +
Sbjct: 138 VISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEMLDRNLAVCNLLLRCFCQTGESKRL 197
Query: 238 LVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGM------------- 284
V+ +M + GV N LT+ ++ C+H LV EG++ ++ G
Sbjct: 198 FEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKSGWNISNIFVANVLVD 257
Query: 285 -------------------EPKVHHYASLVYLVGKSGRLEEAYEIIKTMKV---EPNVVV 322
E V + S+V + G + ++ ++ M+ P++
Sbjct: 258 YYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVLDSLDLFSKMQFWGKRPSIRP 317
Query: 323 FGSFLSACKEHKQFEMAERVIEQVLRM 349
F SFL+ C + + +++ VL+M
Sbjct: 318 FMSFLNFCSRNSDIQSGKQIHCYVLKM 344
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 82/418 (19%), Positives = 170/418 (40%), Gaps = 79/418 (18%)
Query: 2 HLYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLLN 61
+Y ++ GV + + ++ C SH + + LH+ ++K G+ +++ VAN
Sbjct: 199 EVYLRMELEGVAKNGLTYCYMIRGC-SHDRLVYEGKQLHSLVVKSGWNISNIFVAN---- 253
Query: 62 AYVLLSFLDACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMI 121
VL+ + AC GD+ + F P++D +S +S++
Sbjct: 254 --VLVDYYSAC------------------------GDLSGSMRSFNAVPEKDVISWNSIV 287
Query: 122 SAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKN 181
S + GS L LF + + F G +P + L+ C+ + +GK +H +++K
Sbjct: 288 SVCADYGSVLDSLDLFSK-MQFWGKRPSIRPFMSFLNFCSRNSDIQ--SGKQIHCYVLKM 344
Query: 182 GWELNA-ELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVV 240
G+++++ + + L++MY K + N+A++++ + N+ +L+ G ++ + +
Sbjct: 345 GFDVSSLHVQSALIDMYGKCNGIENSALLYQSLPCLNLECCNSLMTSLMHCGITKDIIEM 404
Query: 241 FEKMRVAGVRPNELTFTGVLSA-----------------CA------------------- 264
F M G +E+T + VL A CA
Sbjct: 405 FGLMIDEGTGIDEVTLSTVLKALSLSLPESLHSCTLVHCCAIKSGYAADVAVSCSLIDAY 464
Query: 265 -HAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKT---MKVEPNV 320
+G E R+ F ++ P + S++ ++G + ++++ M + P+
Sbjct: 465 TKSGQNEVSRKVFDELD----TPNIFCLTSIINGYARNGMGTDCVKMLREMDRMNLIPDE 520
Query: 321 VVFGSFLSACKEHKQFEMAERVIEQVLRMVKPEDDRGIYRLIHDLYVMGEKWEEAAKL 378
V S LS C E E + + + R +Y + DL E+A +L
Sbjct: 521 VTILSVLSGCSHSGLVEEGELIFDSLESKYGISPGRKLYACMVDLLGRAGLVEKAERL 578
>AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:10888102-10889949 FORWARD
LENGTH=615
Length = 615
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 64/187 (34%), Positives = 101/187 (54%), Gaps = 2/187 (1%)
Query: 167 GLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALIC 226
GL K+VHG I + L+ L+ MY+ G+ AA VFE M E+N+ +W +I
Sbjct: 269 GLQEAKTVHGKISASVSHLDLSSNHVLLEMYSNCGLANEAASVFEKMSEKNLETWCIIIR 328
Query: 227 GAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFK-MIEDYGME 285
A+ GF E+A+ +F + + G P+ F G+ AC G V+EG +F+ M DYG+
Sbjct: 329 CFAKNGFGEDAIDMFSRFKEEGNIPDGQLFRGIFYACGMLGDVDEGLLHFESMSRDYGIA 388
Query: 286 PKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQ 345
P + Y SLV + G L+EA E ++ M +EPNV V+ + ++ + H E+ + E
Sbjct: 389 PSIEDYVSLVEMYALPGFLDEALEFVERMPMEPNVDVWETLMNLSRVHGNLELGDYCAE- 447
Query: 346 VLRMVKP 352
V+ + P
Sbjct: 448 VVEFLDP 454
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 116/213 (54%), Gaps = 4/213 (1%)
Query: 141 LLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKG 200
LL +G PD+ + CA++ SL K VH +++ + + +L +++M+ +
Sbjct: 227 LLDKGAMPDRECFVLLFESCANLKSLE--HSKKVHDHFLQSKFRGDPKLNNMVISMFGEC 284
Query: 201 GVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVL 260
+ +A VF+ MV++++ SW ++C + G ++AL +FE+M G++PNE TF V
Sbjct: 285 SSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVF 344
Query: 261 SACAHAGLVEEGRRYFK-MIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPN 319
ACA G +EE +F M ++G+ PK HY ++ ++GK G L EA + I+ + EP
Sbjct: 345 LACATVGGIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRDLPFEPT 404
Query: 320 VVVFGSFLSACKEHKQFEMAERVIEQVLRMVKP 352
+ + + + H ++ E +E+++ V P
Sbjct: 405 ADFWEAMRNYARLHGDIDL-EDYMEELMVDVDP 436
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 86/342 (25%), Positives = 167/342 (48%), Gaps = 30/342 (8%)
Query: 32 SLTIIQHLHAHIIKLGFAPTHLHVANCLLNAYVL----LSFLDACILFDEM----PNRNT 83
+L+I+ AH GF P L N +L+A + +SF + +F EM + N
Sbjct: 153 ALSIVHLAQAH----GFMPGVLSY-NAVLDATIRSKRNISFAEN--VFKEMLESQVSPNV 205
Query: 84 VTWNTMIVGYSRSGDVQRAREVFEEAPQR----DSVSLSSMISAYNNIGSSKQGLSLFRR 139
T+N +I G+ +G++ A +F++ + + V+ +++I Y + G L R
Sbjct: 206 FTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRS 265
Query: 140 VLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAK 199
+ L +G++P+ ++ V++G G + ++ V + + G+ L+ TL+ Y K
Sbjct: 266 MAL-KGLEPNLISYNVVINGLCREGRMKEVS--FVLTEMNRRGYSLDEVTYNTLIKGYCK 322
Query: 200 GGVLRNAAMVFELMVER----NVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELT 255
G A ++ M+ +V+++T+LI + G A+ ++MRV G+ PNE T
Sbjct: 323 EGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERT 382
Query: 256 FTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMK 315
+T ++ + G + E R + + D G P V Y +L+ +G++E+A +++ MK
Sbjct: 383 YTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMK 442
Query: 316 ---VEPNVVVFGSFLSA-CKEHKQFEMAERVIEQVLRMVKPE 353
+ P+VV + + LS C+ + E E V + +KP+
Sbjct: 443 EKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPD 484
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 134/279 (48%), Gaps = 18/279 (6%)
Query: 82 NTVTWNTMIVGYSRSGDVQRAREVFEEAPQR----DSVSLSSMISAYNNIGSSKQGLSLF 137
N +++N +I G R G ++ V E +R D V+ +++I Y G+ Q L +
Sbjct: 274 NLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMH 333
Query: 138 RRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMY 197
+L G+ P +T +++ G++ A + + V+ G N TLV+ +
Sbjct: 334 AE-MLRHGLTPSVITYTSLIHSMCKAGNMNR-AMEFLDQMRVR-GLCPNERTYTTLVDGF 390
Query: 198 AKGGVLRNAAMVFELMVER----NVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNE 253
++ G + A V M + +V+++ ALI G G E+A+ V E M+ G+ P+
Sbjct: 391 SQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDV 450
Query: 254 LTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEA---YEI 310
++++ VLS + V+E R + + + G++P Y+SL+ + R +EA YE
Sbjct: 451 VSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEE 510
Query: 311 IKTMKVEPNVVVFGSFLSA-CKE---HKQFEMAERVIEQ 345
+ + + P+ + + ++A C E K ++ ++E+
Sbjct: 511 MLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEK 549
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/295 (20%), Positives = 126/295 (42%), Gaps = 49/295 (16%)
Query: 82 NTVTWNTMIVGYSRSGDVQRA----REVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLF 137
+ VT+NT+I GY + G+ +A E+ ++ +S+I + G+ + +
Sbjct: 309 DEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFL 368
Query: 138 RRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMY 197
++ + G+ P++ T ++ G + G + V + NG+ + L+N +
Sbjct: 369 DQMRV-RGLCPNERTYTTLVDGFSQKGYMN--EAYRVLREMNDNGFSPSVVTYNALINGH 425
Query: 198 AKGGVLRNAAMVFELMVER----NVLSWTALICGAAQ----------------------- 230
G + +A V E M E+ +V+S++ ++ G +
Sbjct: 426 CVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDT 485
Query: 231 -------WGFCE-----EALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKM 278
GFCE EA ++E+M G+ P+E T+T +++A G +E+ +
Sbjct: 486 ITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNE 545
Query: 279 IEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVE---PNVVVFGSFLSAC 330
+ + G+ P V Y+ L+ + K R EA ++ + E P+ V + + + C
Sbjct: 546 MVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENC 600
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 139/311 (44%), Gaps = 18/311 (5%)
Query: 71 ACILFDEMPNR----NTVTWNTMIVGYSRSGDVQRAREVFEE----APQRDSVSLSSMIS 122
A L D++P + + + T++ YSR+G ++A ++FE P V+ + ++
Sbjct: 194 AAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILD 253
Query: 123 AYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNG 182
+ +G S + + + +G+K D+ T VLS CA G L K + G
Sbjct: 254 VFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLL--REAKEFFAELKSCG 311
Query: 183 WELNAELGATLVNMYAKGGVLRNAAMVFELMVER----NVLSWTALICGAAQWGFCEEAL 238
+E L+ ++ K GV A V + M E + +++ L+ + GF +EA
Sbjct: 312 YEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAA 371
Query: 239 VVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLV 298
V E M GV PN +T+T V+ A AG +E + F +++ G P Y +++ L+
Sbjct: 372 GVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLL 431
Query: 299 GKSGRLEEAYEIIKTMK---VEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPEDD 355
GK R E +++ MK PN + + L+ C + RV + ++ E D
Sbjct: 432 GKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFRE-MKSCGFEPD 490
Query: 356 RGIYRLIHDLY 366
R + + Y
Sbjct: 491 RDTFNTLISAY 501
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 98/203 (48%), Gaps = 11/203 (5%)
Query: 185 LNAELGATLVNMYAKGGVLRNAAMVFELMVE----RNVLSWTALICGAAQWGFC-EEALV 239
L+ T+++ Y++ G A +FE M E ++++ ++ + G + L
Sbjct: 208 LDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILG 267
Query: 240 VFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVG 299
V ++MR G++ +E T + VLSACA GL+ E + +F ++ G EP Y +L+ + G
Sbjct: 268 VLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFG 327
Query: 300 KSGRLEEAYEIIKTMK---VEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRM-VKPEDD 355
K+G EA ++K M+ + V + ++A + A VIE + + V P +
Sbjct: 328 KAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMP--N 385
Query: 356 RGIYRLIHDLYVMGEKWEEAAKL 378
Y + D Y K +EA KL
Sbjct: 386 AITYTTVIDAYGKAGKEDEALKL 408
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 73/312 (23%), Positives = 134/312 (42%), Gaps = 41/312 (13%)
Query: 79 PNRNTVTWNTMIVGYSRSGDVQRAREVFEE------APQRDSVSLSSMISAYNNIGSSKQ 132
PNR TWNTM+ G + VF E P RD+ +++ISAY GS
Sbjct: 454 PNR--ATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDT--FNTLISAYGRCGSEVD 509
Query: 133 GLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGAT 192
++ + G T A+L+ A G +G++V + G++ +
Sbjct: 510 ASKMYGE-MTRAGFNACVTTYNALLNALARKGDW--RSGENVISDMKSKGFKPTETSYSL 566
Query: 193 LVNMYAKGGVLRNAAMVFELMVERNVL-SWTAL--------ICGAAQWGFCEEALVVFEK 243
++ YAKGG + + E + SW L C A E A +F+K
Sbjct: 567 MLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGS--ERAFTLFKK 624
Query: 244 MRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGR 303
G +P+ + F +LS + ++ + I + G+ P + Y SL+ + + G
Sbjct: 625 ---HGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGE 681
Query: 304 LEEAYEIIKTM---KVEPNVVVFGSFLSA-CKEHKQFEMAERVIEQVLRMVKPEDDRGIY 359
+A EI+KT+ +++P++V + + + C+ ++++ +RM+ +RGI
Sbjct: 682 CWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRG--------LMQEAVRMLSEMTERGIR 733
Query: 360 RLI--HDLYVMG 369
I ++ +V G
Sbjct: 734 PCIFTYNTFVSG 745
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/331 (18%), Positives = 135/331 (40%), Gaps = 20/331 (6%)
Query: 47 GFAPTHLHVANCLLNAYVLL-SFLDACILFDEMP----NRNTVTWNTMIVGYSRSGDVQR 101
GF P N L++AY S +DA ++ EM N T+N ++ +R GD +
Sbjct: 486 GFEPDR-DTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRS 544
Query: 102 AREVFEEAPQR----DSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVL 157
V + + S S M+ Y G + G+ + I P + +L
Sbjct: 545 GENVISDMKSKGFKPTETSYSLMLQCYAK-GGNYLGIERIENRIKEGQIFPSWMLLRTLL 603
Query: 158 SGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVER- 216
A+ L + K+G++ + + ++++++ + + A + E + E
Sbjct: 604 --LANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDG 661
Query: 217 ---NVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGR 273
+++++ +L+ + G C +A + + + + ++P+ +++ V+ GL++E
Sbjct: 662 LSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAV 721
Query: 274 RYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTM---KVEPNVVVFGSFLSAC 330
R + + G+ P + Y + V G E ++I+ M PN + F +
Sbjct: 722 RMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGY 781
Query: 331 KEHKQFEMAERVIEQVLRMVKPEDDRGIYRL 361
++ A + ++ DD+ I RL
Sbjct: 782 CRAGKYSEAMDFVSKIKTFDPCFDDQSIQRL 812
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 145/309 (46%), Gaps = 21/309 (6%)
Query: 70 DACILFDEMPNR----NTVTWNTMI---VGYSRSGDVQRA-REVFEEAPQRDSVSLSSMI 121
DA LF EM N+ N VT+N++I Y R D R ++ E + V+ S++I
Sbjct: 274 DALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALI 333
Query: 122 SAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSG-CAHMGSLGLLAGKSVHGFIVK 180
A+ G + L+ ++ I PD T ++++G C H L K + ++
Sbjct: 334 DAFVKEGKLVEAEKLYDE-MIKRSIDPDIFTYSSLINGFCMHDR---LDEAKHMFELMIS 389
Query: 181 NGWELNAELGATLVNMYAKGGVLRNAAMVFELMVER----NVLSWTALICGAAQWGFCEE 236
N TL+ + K + +F M +R N +++T LI G Q C+
Sbjct: 390 KDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDN 449
Query: 237 ALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVY 296
A +VF++M GV P+ +T++ +L + G VE F+ ++ MEP ++ Y ++
Sbjct: 450 AQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIE 509
Query: 297 LVGKSGRLEEAYEIIKTMK---VEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPE 353
+ K+G++E+ +++ ++ V+PNVV + + +S E A+ + + ++ P
Sbjct: 510 GMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFRE-MKEEGPL 568
Query: 354 DDRGIYRLI 362
D G Y +
Sbjct: 569 PDSGTYNTL 577
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/292 (21%), Positives = 129/292 (44%), Gaps = 52/292 (17%)
Query: 37 QHLHAHIIKLGFAPTHLHVANCLLNAYVLLSFLD-ACILFDEMPNR----NTVTWNTMIV 91
+ L+ +IK P + + L+N + + LD A +F+ M ++ N VT+NT+I
Sbjct: 346 EKLYDEMIKRSIDP-DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIK 404
Query: 92 GYSRSGDVQRAREVFEEAPQR----DSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIK 147
G+ ++ V E+F E QR ++V+ +++I + +F++ ++ +G+
Sbjct: 405 GFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQ-MVSDGVL 463
Query: 148 PDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAA 207
PD +T +L G + G + A
Sbjct: 464 PDIMTYSILLDGLCN-------------------------------------NGKVETAL 486
Query: 208 MVFELM----VERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSAC 263
+VFE + +E ++ ++ +I G + G E+ +F + + GV+PN +T+T ++S
Sbjct: 487 VVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGF 546
Query: 264 AHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMK 315
GL EE F+ +++ G P Y +L+ + G + E+I+ M+
Sbjct: 547 CRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMR 598
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/344 (19%), Positives = 145/344 (42%), Gaps = 47/344 (13%)
Query: 13 PFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLLNAYVLLSFLD-A 71
PF S L S + ++ ++ L + LG + +L+ + L+N + S L A
Sbjct: 77 PFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGIS-HNLYTYSILINCFCRRSQLSLA 135
Query: 72 CILFDEMPN----RNTVTWNTMIVGYSRSGDVQRA----REVFEEAPQRDSVSLSSMISA 123
+ +M + VT N+++ G+ + A ++ E Q DS + +++I
Sbjct: 136 LAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHG 195
Query: 124 YNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGW 183
+ + ++L R+++ +G +PD VT G V++G G +
Sbjct: 196 LFRHNRASEAVALVDRMVV-KGCQPDLVTYGIVVNGLCKRGDI----------------- 237
Query: 184 ELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEK 243
+L +L+ +G + E V+ + +I + +AL +F +
Sbjct: 238 ----DLALSLLKKMEQGKI------------EPGVVIYNTIIDALCNYKNVNDALNLFTE 281
Query: 244 MRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGR 303
M G+RPN +T+ ++ + G + R + + + P V +++L+ K G+
Sbjct: 282 MDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGK 341
Query: 304 LEEAYEIIKTM---KVEPNVVVFGSFLSACKEHKQFEMAERVIE 344
L EA ++ M ++P++ + S ++ H + + A+ + E
Sbjct: 342 LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFE 385
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 124/273 (45%), Gaps = 41/273 (15%)
Query: 82 NTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVL 141
+TV + T+I G+ + GD++ A + F E RD
Sbjct: 350 DTVVYTTLIDGFCKRGDIRAASKFFYEMHSRD---------------------------- 381
Query: 142 LFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGG 201
I PD +T A++SG +G + + AGK H K G E ++ L+N Y K G
Sbjct: 382 ----ITPDVLTYTAIISGFCQIGDM-VEAGKLFHEMFCK-GLEPDSVTFTELINGYCKAG 435
Query: 202 VLRNAAMVFELMVER----NVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFT 257
+++A V M++ NV+++T LI G + G + A + +M G++PN T+
Sbjct: 436 HMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYN 495
Query: 258 GVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTM--- 314
+++ +G +EE + E G+ Y +L+ KSG +++A EI+K M
Sbjct: 496 SIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGK 555
Query: 315 KVEPNVVVFGSFLSACKEHKQFEMAERVIEQVL 347
++P +V F ++ H E E+++ +L
Sbjct: 556 GLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWML 588
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 134/288 (46%), Gaps = 18/288 (6%)
Query: 71 ACILFDEMPNR----NTVTWNTMIVGYSRSGDVQRAREVFE----EAPQRDSVSLSSMIS 122
A I+F E P N ++N +I + G ++ A + + D +S S++++
Sbjct: 230 AIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVN 289
Query: 123 AYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNG 182
Y G + L V+ +G+KP+ G+++ + L + +++ G
Sbjct: 290 GYCRFGELDKVWKLIE-VMKRKGLKPNSYIYGSIIGLLCRICKLA--EAEEAFSEMIRQG 346
Query: 183 WELNAELGATLVNMYAKGGVLRNAAMVFELMVERN----VLSWTALICGAAQWGFCEEAL 238
+ + TL++ + K G +R A+ F M R+ VL++TA+I G Q G EA
Sbjct: 347 ILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAG 406
Query: 239 VVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLV 298
+F +M G+ P+ +TFT +++ AG +++ R + G P V Y +L+ +
Sbjct: 407 KLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGL 466
Query: 299 GKSGRLEEAYEIIKTM---KVEPNVVVFGSFLSACKEHKQFEMAERVI 343
K G L+ A E++ M ++PN+ + S ++ + E A +++
Sbjct: 467 CKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLV 514
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 73/349 (20%), Positives = 140/349 (40%), Gaps = 50/349 (14%)
Query: 71 ACILFDEMPNRN----TVTWNTMIVGYSRSGDVQRAREVFEE----APQRDSVSLSSMIS 122
A F EM +R+ +T+ +I G+ + GD+ A ++F E + DSV+ + +I+
Sbjct: 370 ASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELIN 429
Query: 123 AYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSL---------------- 166
Y G K + ++ G P+ VT ++ G G L
Sbjct: 430 GYCKAGHMKDAFRVHNHMIQ-AGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQ 488
Query: 167 -GLLAGKSVHGFIVKNG-----------WE---LNAEL--GATLVNMYAKGGVLRNAAMV 209
+ S+ + K+G +E LNA+ TL++ Y K G + A +
Sbjct: 489 PNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEI 548
Query: 210 FELMV----ERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAH 265
+ M+ + ++++ L+ G G E+ + M G+ PN TF ++
Sbjct: 549 LKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCI 608
Query: 266 AGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMK---VEPNVVV 322
++ +K + G+ P Y +LV K+ ++EA+ + + MK +V
Sbjct: 609 RNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVST 668
Query: 323 FGSFLSACKEHKQFEMAERVIEQVLRMVKPEDDRGIYRLIHDLYVMGEK 371
+ + + K+F A V +Q +R D+ I+ D G++
Sbjct: 669 YSVLIKGFLKRKKFLEAREVFDQ-MRREGLAADKEIFDFFSDTKYKGKR 716
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 124/273 (45%), Gaps = 41/273 (15%)
Query: 82 NTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVL 141
+TV + T+I G+ + GD++ A + F E RD
Sbjct: 350 DTVVYTTLIDGFCKRGDIRAASKFFYEMHSRD---------------------------- 381
Query: 142 LFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGG 201
I PD +T A++SG +G + + AGK H K G E ++ L+N Y K G
Sbjct: 382 ----ITPDVLTYTAIISGFCQIGDM-VEAGKLFHEMFCK-GLEPDSVTFTELINGYCKAG 435
Query: 202 VLRNAAMVFELMVER----NVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFT 257
+++A V M++ NV+++T LI G + G + A + +M G++PN T+
Sbjct: 436 HMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYN 495
Query: 258 GVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTM--- 314
+++ +G +EE + E G+ Y +L+ KSG +++A EI+K M
Sbjct: 496 SIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGK 555
Query: 315 KVEPNVVVFGSFLSACKEHKQFEMAERVIEQVL 347
++P +V F ++ H E E+++ +L
Sbjct: 556 GLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWML 588
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 134/288 (46%), Gaps = 18/288 (6%)
Query: 71 ACILFDEMPNR----NTVTWNTMIVGYSRSGDVQRAREVFE----EAPQRDSVSLSSMIS 122
A I+F E P N ++N +I + G ++ A + + D +S S++++
Sbjct: 230 AIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVN 289
Query: 123 AYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNG 182
Y G + L V+ +G+KP+ G+++ + L + +++ G
Sbjct: 290 GYCRFGELDKVWKLIE-VMKRKGLKPNSYIYGSIIGLLCRICKLA--EAEEAFSEMIRQG 346
Query: 183 WELNAELGATLVNMYAKGGVLRNAAMVFELMVERN----VLSWTALICGAAQWGFCEEAL 238
+ + TL++ + K G +R A+ F M R+ VL++TA+I G Q G EA
Sbjct: 347 ILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAG 406
Query: 239 VVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLV 298
+F +M G+ P+ +TFT +++ AG +++ R + G P V Y +L+ +
Sbjct: 407 KLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGL 466
Query: 299 GKSGRLEEAYEIIKTM---KVEPNVVVFGSFLSACKEHKQFEMAERVI 343
K G L+ A E++ M ++PN+ + S ++ + E A +++
Sbjct: 467 CKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLV 514
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 73/349 (20%), Positives = 140/349 (40%), Gaps = 50/349 (14%)
Query: 71 ACILFDEMPNRN----TVTWNTMIVGYSRSGDVQRAREVFEE----APQRDSVSLSSMIS 122
A F EM +R+ +T+ +I G+ + GD+ A ++F E + DSV+ + +I+
Sbjct: 370 ASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELIN 429
Query: 123 AYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSL---------------- 166
Y G K + ++ G P+ VT ++ G G L
Sbjct: 430 GYCKAGHMKDAFRVHNHMIQ-AGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQ 488
Query: 167 -GLLAGKSVHGFIVKNG-----------WE---LNAEL--GATLVNMYAKGGVLRNAAMV 209
+ S+ + K+G +E LNA+ TL++ Y K G + A +
Sbjct: 489 PNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEI 548
Query: 210 FELMV----ERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAH 265
+ M+ + ++++ L+ G G E+ + M G+ PN TF ++
Sbjct: 549 LKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCI 608
Query: 266 AGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMK---VEPNVVV 322
++ +K + G+ P Y +LV K+ ++EA+ + + MK +V
Sbjct: 609 RNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVST 668
Query: 323 FGSFLSACKEHKQFEMAERVIEQVLRMVKPEDDRGIYRLIHDLYVMGEK 371
+ + + K+F A V +Q +R D+ I+ D G++
Sbjct: 669 YSVLIKGFLKRKKFLEAREVFDQ-MRREGLAADKEIFDFFSDTKYKGKR 716
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 137/280 (48%), Gaps = 21/280 (7%)
Query: 70 DACILFDEMPNR----NTVTWNTMI---VGYSRSGDVQRA-REVFEEAPQRDSVSLSSMI 121
DA LF EM N+ N +T++++I Y R D R ++ E + V+ +++I
Sbjct: 278 DALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALI 337
Query: 122 SAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSG-CAHMGSLGLLAGKSVHGFIVK 180
A+ G + L+ ++ I PD T ++++G C H L K + ++
Sbjct: 338 DAFVKEGKLVEAEKLYDE-MIKRSIDPDIFTYSSLINGFCMHDR---LDEAKHMFELMIS 393
Query: 181 NGWELNAELGATLVNMYAKGGVLRNAAMVFELMVER----NVLSWTALICGAAQWGFCEE 236
N TL+N + K + +F M +R N +++T LI G Q C+
Sbjct: 394 KDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDN 453
Query: 237 ALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVY 296
A +VF++M GV PN +T+ +L G +E+ F+ ++ MEP ++ Y ++
Sbjct: 454 AQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIE 513
Query: 297 LVGKSGRLEEAYEIIKTMK---VEPNVVVFGSFLSA-CKE 332
+ K+G++E+ +++ ++ V+P+V+++ + +S C++
Sbjct: 514 GMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRK 553
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 130/277 (46%), Gaps = 18/277 (6%)
Query: 51 THLHVANCLLNAYVLLSFLDACILFDEMPNR----NTVTWNTMIVGYSRSGDVQRAREVF 106
T+ + +CL N + DA L +M R N VT+N +I + + G + A +++
Sbjct: 297 TYSSLISCLCNYE---RWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLY 353
Query: 107 EEAPQR----DSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAH 162
+E +R D + SS+I+ + + +F +++ + P+ VT +++G
Sbjct: 354 DEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFE-LMISKDCFPNVVTYNTLINGFCK 412
Query: 163 MGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVER----NV 218
+ G + + + G N TL++ + + NA MVF+ MV N+
Sbjct: 413 AKRID--EGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNI 470
Query: 219 LSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKM 278
+++ L+ G + G E+A+VVFE ++ + + P T+ ++ AG VE+G F
Sbjct: 471 MTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCS 530
Query: 279 IEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMK 315
+ G++P V Y +++ + G EEA + + M+
Sbjct: 531 LSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMR 567
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/313 (22%), Positives = 139/313 (44%), Gaps = 31/313 (9%)
Query: 57 NCLLNAYVLLSFLDACILFDEMPNR-----NTVTWNTMIVGYSRSGDVQRAR----EVFE 107
N LL+A + D I E R N T+N +I + R + A ++ +
Sbjct: 89 NKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMK 148
Query: 108 EAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLG 167
+ V+LSS+++ Y + ++L +++ G +PD +T ++ G
Sbjct: 149 LGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM-GYRPDTITFTTLIHGL------- 200
Query: 168 LLAGKSVHGF-----IVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELM----VERNV 218
L K+ +V+ G + N +VN K G + A + M +E NV
Sbjct: 201 FLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANV 260
Query: 219 LSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSA-CAHAGLVEEGRRYFK 277
+ ++ +I ++ ++AL +F +M GVRPN +T++ ++S C + + R
Sbjct: 261 VIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSD 320
Query: 278 MIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTM---KVEPNVVVFGSFLSACKEHK 334
MIE + P V + +L+ K G+L EA ++ M ++P++ + S ++ H
Sbjct: 321 MIE-RKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD 379
Query: 335 QFEMAERVIEQVL 347
+ + A+ + E ++
Sbjct: 380 RLDEAKHMFELMI 392
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 108/245 (44%), Gaps = 24/245 (9%)
Query: 145 GIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFI------VKNGWELNAELGATLVNMYA 198
G +P VT ++L+G H GK + + V+ G+ + TL++
Sbjct: 150 GYEPSIVTLSSLLNGYCH--------GKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF 201
Query: 199 KGGVLRNAAMVFELMVER----NVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNEL 254
A + + MV+R N++++ ++ G + G + A + KM A + N +
Sbjct: 202 LHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVV 261
Query: 255 TFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTM 314
++ V+ + ++ F +E+ G+ P V Y+SL+ + R +A ++ M
Sbjct: 262 IYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDM 321
Query: 315 ---KVEPNVVVFGSFLSA-CKEHKQFEMAERVIEQVLRMVKPEDDRGIYRLIHDLYVMGE 370
K+ PNVV F + + A KE K E + E + R + P D Y + + + M +
Sbjct: 322 IERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDP--DIFTYSSLINGFCMHD 379
Query: 371 KWEEA 375
+ +EA
Sbjct: 380 RLDEA 384
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 107/232 (46%), Gaps = 17/232 (7%)
Query: 37 QHLHAHIIKLGFAPTHLHVANCLLNAYVLLSFLD-ACILFDEMPNR----NTVTWNTMIV 91
+ L+ +IK P + + L+N + + LD A +F+ M ++ N VT+NT+I
Sbjct: 350 EKLYDEMIKRSIDP-DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIN 408
Query: 92 GYSRSGDVQRAREVFEEAPQR----DSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIK 147
G+ ++ + E+F E QR ++V+ +++I + +F++ ++ +G+
Sbjct: 409 GFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQ-MVSDGVH 467
Query: 148 PDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAA 207
P+ +T +L G G L V ++ ++ E ++ K G + +
Sbjct: 468 PNIMTYNTLLDGLCKNGKLE--KAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGW 525
Query: 208 MVFELM----VERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELT 255
+F + V+ +V+ + +I G + G EEA +F KMR G P+ T
Sbjct: 526 DLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 146/310 (47%), Gaps = 23/310 (7%)
Query: 70 DACILFDEMPNR----NTVTWNTMI---VGYSRSGDVQRA-REVFEEAPQRDSVSLSSMI 121
DA LF EM N+ + T++++I Y R D R ++ E + V+ +S+I
Sbjct: 258 DALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLI 317
Query: 122 SAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSG-CAHMGSLGLLAGKSVHGFIVK 180
A+ G + LF ++ I P+ VT ++++G C H L + + +V
Sbjct: 318 DAFAKEGKLIEAEKLFDE-MIQRSIDPNIVTYNSLINGFCMHDR---LDEAQQIFTLMVS 373
Query: 181 NGWELNAELGATLVNMYAKGGVLRNAAMVFELMVER----NVLSWTALICGAAQWGFCEE 236
+ TL+N + K + + +F M R N +++T LI G Q C+
Sbjct: 374 KDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDN 433
Query: 237 ALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVY 296
A +VF++M GV PN +T+ +L G +E+ F+ ++ MEP ++ Y +
Sbjct: 434 AQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSE 493
Query: 297 LVGKSGRLEEAYEIIKTMK---VEPNVVVFGSFLSA-CKEHKQFEMAERVIEQVLRMVKP 352
+ K+G++E+ +++ ++ V+P+V+ + + +S CK+ + E I+ ++ P
Sbjct: 494 GMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIK--MKEDGP 551
Query: 353 EDDRGIYRLI 362
D G Y +
Sbjct: 552 LPDSGTYNTL 561
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 152/315 (48%), Gaps = 27/315 (8%)
Query: 70 DACILFDEMPNR----NTVTWNTMIVGYSRSGDVQRAREVFEEAPQR----DSVSLSSMI 121
DA L +M R N VT+N++I +++ G + A ++F+E QR + V+ +S+I
Sbjct: 293 DASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLI 352
Query: 122 SAY---NNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFI 178
+ + + + ++Q +L ++ + PD VT +++G + + G + +
Sbjct: 353 NGFCMHDRLDEAQQIFTL----MVSKDCLPDVVTYNTLINGFCKAKKV--VDGMELFRDM 406
Query: 179 VKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVER----NVLSWTALICGAAQWGFC 234
+ G N TL++ + + NA MVF+ MV N++++ L+ G + G
Sbjct: 407 SRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKL 466
Query: 235 EEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASL 294
E+A+VVFE ++ + + P+ T+ + AG VE+G F + G++P V Y ++
Sbjct: 467 EKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTM 526
Query: 295 VYLVGKSGRLEEAYEIIKTMKVE---PNVVVFGSFLSA-CKEHKQFEMAERVIEQVLRMV 350
+ K G EEAY + MK + P+ + + + A ++ + AE + E +R
Sbjct: 527 ISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKE--MRSC 584
Query: 351 KPEDDRGIYRLIHDL 365
+ D Y L+ D+
Sbjct: 585 RFAGDASTYGLVTDM 599
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/266 (21%), Positives = 121/266 (45%), Gaps = 41/266 (15%)
Query: 84 VTWNTMIVGYSRSGDVQRA----REVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRR 139
VT N+++ G+ + A ++ E Q D+V+ ++++ + + ++L R
Sbjct: 136 VTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVER 195
Query: 140 VLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAK 199
+++ +G +PD VT GAV++G G +L L+N K
Sbjct: 196 MVV-KGCQPDLVTYGAVINGLCKRGE---------------------PDLALNLLNKMEK 233
Query: 200 GGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGV 259
G + E +V+ ++ +I ++ ++AL +F +M G+RP+ T++ +
Sbjct: 234 GKI------------EADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSL 281
Query: 260 LSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTM---KV 316
+S + G + R + + + P V + SL+ K G+L EA ++ M +
Sbjct: 282 ISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSI 341
Query: 317 EPNVVVFGSFLSACKEHKQFEMAERV 342
+PN+V + S ++ H + + A+++
Sbjct: 342 DPNIVTYNSLINGFCMHDRLDEAQQI 367
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/376 (23%), Positives = 176/376 (46%), Gaps = 28/376 (7%)
Query: 25 SCTSHLHSLTIIQ-----HLHAHIIKLGFAPTHLHVANCLLNAYVLLSFLD-ACILFDEM 78
SC L L++ Q L + ++ G AP + L+N + +D A LF M
Sbjct: 254 SCNKVLKGLSVDQIEVASRLLSLVLDCGPAPNVVTFCT-LINGFCKRGEMDRAFDLFKVM 312
Query: 79 PNR----NTVTWNTMIVGYSRSGDVQRAREVFEEAPQR----DSVSLSSMISAYNNIGSS 130
R + + ++T+I GY ++G + ++F +A + D V SS I Y G
Sbjct: 313 EQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDL 372
Query: 131 KQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELG 190
+++R +L +GI P+ VT ++ G G + G ++G I+K G E +
Sbjct: 373 ATASVVYKR-MLCQGISPNVVTYTILIKGLCQDGRIYEAFG--MYGQILKRGMEPSIVTY 429
Query: 191 ATLVNMYAKGGVLRNAAMVFELMVER----NVLSWTALICGAAQWGFCEEALVVFEKMRV 246
++L++ + K G LR+ ++E M++ +V+ + L+ G ++ G A+ KM
Sbjct: 430 SSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLG 489
Query: 247 AGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEE 306
+R N + F ++ +E + F+++ YG++P V + +++ + GRLEE
Sbjct: 490 QSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEE 549
Query: 307 A----YEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPEDDRGIYRLI 362
A + + K M +EP+ + + + + A +H + + ++ + + R K D + ++
Sbjct: 550 ALFLFFRMFK-MGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRN-KISADIAVCNVV 607
Query: 363 HDLYVMGEKWEEAAKL 378
L + E+A+K
Sbjct: 608 IHLLFKCHRIEDASKF 623
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/278 (19%), Positives = 123/278 (44%), Gaps = 16/278 (5%)
Query: 82 NTVTWNTMIVGYSRSGDVQRAREVFE----EAPQRDSVSLSSMISAYNNIGSSKQGLSLF 137
N V +N++I G+ R A +VF + D + ++++ G ++ L LF
Sbjct: 495 NVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLF 554
Query: 138 RRVLLFEGIKPDQVTAGAVLSG-CAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNM 196
R+ G++PD + ++ C HM G + + +N + + ++++
Sbjct: 555 FRMFKM-GLEPDALAYCTLIDAFCKHMKPT---IGLQLFDLMQRNKISADIAVCNVVIHL 610
Query: 197 YAKGGVLRNAAMVFELMVE----RNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPN 252
K + +A+ F ++E +++++ +ICG +EA +FE ++V PN
Sbjct: 611 LFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPN 670
Query: 253 ELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIK 312
+T T ++ ++ R F ++ + G +P Y L+ KS +E ++++ +
Sbjct: 671 TVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFE 730
Query: 313 TMK---VEPNVVVFGSFLSACKEHKQFEMAERVIEQVL 347
M+ + P++V + + + + + A + Q +
Sbjct: 731 EMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAI 768
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 116/261 (44%), Gaps = 27/261 (10%)
Query: 95 RSGDVQRAREVFEEAPQRDSV----SLSSMISAYNNIGSSKQGL--SLFRRVLLFEGIKP 148
R G V +A E+F + Q V S+ M+++ IGS + L F + L GI+P
Sbjct: 158 RYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSL--IGSDRVDLIADHFDK-LCRGGIEP 214
Query: 149 DQVTA-GAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVL---- 203
V+A G VL G + H +++ G+ + G N KG +
Sbjct: 215 SGVSAHGFVLDALFCKGEV--TKALDFHRLVMERGFRV----GIVSCNKVLKGLSVDQIE 268
Query: 204 ---RNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVL 260
R ++V + NV+++ LI G + G + A +F+ M G+ P+ + ++ ++
Sbjct: 269 VASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLI 328
Query: 261 SACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTM---KVE 317
AG++ G + F G++ V ++S + + KSG L A + K M +
Sbjct: 329 DGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGIS 388
Query: 318 PNVVVFGSFLSA-CKEHKQFE 337
PNVV + + C++ + +E
Sbjct: 389 PNVVTYTILIKGLCQDGRIYE 409
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 148/303 (48%), Gaps = 26/303 (8%)
Query: 81 RNTV-TWNTMIVGYSRSGDVQRAREVFEEAPQR----DSVSLSSMISAYNNIGSSKQGLS 135
R TV T+N MI + GDV+ AR +FEE R D+V+ +SMI + +G
Sbjct: 259 RPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGR------ 312
Query: 136 LFRRVLLFEGIK-----PDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELG 190
L V FE +K PD +T A+++ G L + G + + NG + N
Sbjct: 313 LDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPI--GLEFYREMKGNGLKPNVVSY 370
Query: 191 ATLVNMYAKGGVLRNAAMVFELM----VERNVLSWTALICGAAQWGFCEEALVVFEKMRV 246
+TLV+ + K G+++ A + M + N ++T+LI + G +A + +M
Sbjct: 371 STLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQ 430
Query: 247 AGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEE 306
GV N +T+T ++ A ++E F ++ G+ P + Y +L++ K+ ++
Sbjct: 431 VGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDR 490
Query: 307 AYEIIKTMK---VEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPEDDRGIYRLIH 363
A E++ +K ++P+++++G+F+ ++ E A+ V+ + ++ + + IY +
Sbjct: 491 ALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNE-MKECGIKANSLIYTTLM 549
Query: 364 DLY 366
D Y
Sbjct: 550 DAY 552
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/333 (20%), Positives = 135/333 (40%), Gaps = 60/333 (18%)
Query: 70 DACILFDEMPNR----NTVTWNTMIVGYSRSGDVQRAREVFEEAP----QRDSVSLSSMI 121
D F+EM + + +T+N +I + + G + E + E + + VS S+++
Sbjct: 315 DTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLV 374
Query: 122 SAYNNIGSSKQGLSLF---RRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFI 178
A+ G +Q + + RRV G+ P++ T +++ +G+L + +
Sbjct: 375 DAFCKEGMMQQAIKFYVDMRRV----GLVPNEYTYTSLIDANCKIGNLS--DAFRLGNEM 428
Query: 179 VKNGWELNAELGATLVNMYAKGGVLRNAAMVFELM----VERNVLSWTALICGAAQ---- 230
++ G E N L++ ++ A +F M V N+ S+ ALI G +
Sbjct: 429 LQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNM 488
Query: 231 --------------------------WGFC-----EEALVVFEKMRVAGVRPNELTFTGV 259
WG C E A VV +M+ G++ N L +T +
Sbjct: 489 DRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTL 548
Query: 260 LSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYE----IIKTMK 315
+ A +G EG +++ +E V + L+ + K+ + +A + I
Sbjct: 549 MDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFG 608
Query: 316 VEPNVVVFGSFLSACKEHKQFEMAERVIEQVLR 348
++ N +F + + + Q E A + EQ+++
Sbjct: 609 LQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQ 641
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/290 (21%), Positives = 133/290 (45%), Gaps = 22/290 (7%)
Query: 37 QHLHAHIIKLGFAPTHLHVANCLLNAYVLLSFLDACI-LFDEMPNR----NTVTWNTMIV 91
+ L + G P +L N L++ +V +D + L +E+ R + + + T I
Sbjct: 457 EELFGKMDTAGVIP-NLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIW 515
Query: 92 GYSRSGDVQRAREVFEEAPQ----RDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIK 147
G ++ A+ V E + +S+ ++++ AY G+ +GL L + + I+
Sbjct: 516 GLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELD-IE 574
Query: 148 PDQVTAGAVLSGCAHMGSLGLLAGKSVHGF-IVKN--GWELNAELGATLVNMYAKGGVLR 204
VT ++ G L K+V F + N G + NA + +++ K +
Sbjct: 575 VTVVTFCVLIDGLCK----NKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVE 630
Query: 205 NAAMVFELMVERNVL----SWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVL 260
A +FE MV++ ++ ++T+L+ G + G EAL + +KM G++ + L +T ++
Sbjct: 631 AATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLV 690
Query: 261 SACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEI 310
+H +++ R + + + G+ P S++ + G ++EA E+
Sbjct: 691 WGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVEL 740
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 90/362 (24%), Positives = 165/362 (45%), Gaps = 49/362 (13%)
Query: 57 NCLLNAYVLLSFLD-ACILFDEMPNR----NTVTWNTMIVGYSRSGDVQRAREVFEE--- 108
N LL+A +D A + +MP + N V+++T+I G++++G A +F E
Sbjct: 378 NTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRY 437
Query: 109 -APQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLG 167
D VS ++++S Y +G S++ L + R + GIK D VT A+L G G
Sbjct: 438 LGIALDRVSYNTLLSIYTKVGRSEEALDILREMASV-GIKKDVVTYNALLGGYGKQGKYD 496
Query: 168 LLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELM----VERNVLSWTA 223
+ K V + + N +TL++ Y+KGG+ + A +F + +V+ ++A
Sbjct: 497 EV--KKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSA 554
Query: 224 LICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVL----------------------- 260
LI + G A+ + ++M G+ PN +T+ ++
Sbjct: 555 LIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADYSNGGSLPF 614
Query: 261 SACAHAGLVE-EGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPN 319
S+ A + L E EG R ++ E + + + E + + ++++PN
Sbjct: 615 SSSALSALTETEGNRVIQLFGQLTTESNNRTTKDCEEGMQELSCILEVFRKMHQLEIKPN 674
Query: 320 VVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPEDDRGIYRLIHDLYVMGEK---WEEAA 376
VV F + L+AC FE A ++E+ LR+ D +Y ++H L +MG++ W +A
Sbjct: 675 VVTFSAILNACSRCNSFEDASMLLEE-LRLF----DNKVYGVVHGL-LMGQRENVWLQAQ 728
Query: 377 KL 378
L
Sbjct: 729 SL 730
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 79/319 (24%), Positives = 154/319 (48%), Gaps = 24/319 (7%)
Query: 87 NTMIVGYSRSGDVQRAREVFEEAPQ----RDSVSLSSMISAYNNIGSSKQGLSLFRRVLL 142
+ MI R G V A+ +FE A + S++ISAY G ++ +S+F +
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKE 296
Query: 143 FEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGF---IVKNGWELNAELGATLVNMYAK 199
+ G++P+ VT AV+ C G + K V F + +NG + + +L+ + ++
Sbjct: 297 Y-GLRPNLVTYNAVIDACGKGG----MEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSR 351
Query: 200 GGVLRNAAMVFELM----VERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELT 255
GG+ A +F+ M +E++V S+ L+ + G + A + +M V + PN ++
Sbjct: 352 GGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVS 411
Query: 256 FTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMK 315
++ V+ A AG +E F + G+ Y +L+ + K GR EEA +I++ M
Sbjct: 412 YSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMA 471
Query: 316 ---VEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRM-VKPEDDRGIYRLIHDLYVMGEK 371
++ +VV + + L + +++ ++V ++ R V P + Y + D Y G
Sbjct: 472 SVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLP--NLLTYSTLIDGYSKGGL 529
Query: 372 WEEAAKLGPGFDFNRSGIR 390
++EA ++ +F +G+R
Sbjct: 530 YKEAMEIFR--EFKSAGLR 546
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 132/281 (46%), Gaps = 22/281 (7%)
Query: 66 LSFLDACILFDEM------PNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQR----DSV 115
+ F FDEM P+R +T+N+++ SR G + AR +F+E R D
Sbjct: 318 MEFKQVAKFFDEMQRNGVQPDR--ITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVF 375
Query: 116 SLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVH 175
S ++++ A G + ++ + + I P+ V+ V+ G A G ++
Sbjct: 376 SYNTLLDAICKGGQMDLAFEILAQMPV-KRIMPNVVSYSTVIDGFAKAGRFD--EALNLF 432
Query: 176 GFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELM----VERNVLSWTALICGAAQW 231
G + G L+ TL+++Y K G A + M ++++V+++ AL+ G +
Sbjct: 433 GEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQ 492
Query: 232 GFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHY 291
G +E VF +M+ V PN LT++ ++ + GL +E F+ + G+ V Y
Sbjct: 493 GKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLY 552
Query: 292 ASLVYLVGKSGRLEEAYEIIKTMKVE---PNVVVFGSFLSA 329
++L+ + K+G + A +I M E PNVV + S + A
Sbjct: 553 SALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDA 593
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 120/252 (47%), Gaps = 23/252 (9%)
Query: 74 LFDEMPNR----NTVTWNTMIVGYSRSGDVQRAREVFEEAPQR----DSVSLSSMISAYN 125
LFDEM NR + ++NT++ + G + A E+ + P + + VS S++I +
Sbjct: 361 LFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFA 420
Query: 126 NIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMG----SLGLLAGKSVHGFIVKN 181
G + L+LF + + GI D+V+ +LS +G +L +L + G I K+
Sbjct: 421 KAGRFDEALNLFGE-MRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVG-IKKD 478
Query: 182 GWELNAELGATLVNMYAKGGVLRNAAMVFELM----VERNVLSWTALICGAAQWGFCEEA 237
NA LG Y K G VF M V N+L+++ LI G ++ G +EA
Sbjct: 479 VVTYNALLGG-----YGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEA 533
Query: 238 LVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYL 297
+ +F + + AG+R + + ++ ++ A GLV + G+ P V Y S++
Sbjct: 534 MEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDA 593
Query: 298 VGKSGRLEEAYE 309
G+S ++ + +
Sbjct: 594 FGRSATMDRSAD 605
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 88/357 (24%), Positives = 159/357 (44%), Gaps = 29/357 (8%)
Query: 42 HIIKLGFAPTHLHVANCLLNAYVLLSFLDACILFDEMPNR----NTVTWNTMIVGYSRSG 97
++KLG+ P + ++ +A +L D M + VT+N+++ G RSG
Sbjct: 148 KVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSG 207
Query: 98 DVQRAREVFEEAPQR----DSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTA 153
D A ++ + +R D + S++I + G +SLF+ + +GIK VT
Sbjct: 208 DTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKE-METKGIKSSVVTY 266
Query: 154 GAVLSGCAHMGSL---GLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVF 210
+++ G G LL V IV N N L++++ K G L+ A ++
Sbjct: 267 NSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNV-----LLDVFVKEGKLQEANELY 321
Query: 211 ELMVER----NVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHA 266
+ M+ R N++++ L+ G EA + + M P+ +TFT ++
Sbjct: 322 KEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMV 381
Query: 267 GLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTM---KVEPNVVVF 323
V++G + F+ I G+ Y+ LV +SG+++ A E+ + M V P+V+ +
Sbjct: 382 KRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTY 441
Query: 324 GSFLSACKEHKQFEMAERVIEQVLRMVKPEDDRGI--YRLIHDLYVMGEKWEEAAKL 378
G L ++ + E A + E + K + D GI Y I + G K E+A L
Sbjct: 442 GILLDGLCDNGKLEKALEIFED---LQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNL 495
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/295 (22%), Positives = 135/295 (45%), Gaps = 24/295 (8%)
Query: 70 DACILFDEMPNR----NTVTWNTMIVGYSRSGDVQRAREVFEEAPQR----DSVSLSSMI 121
D +L +M +R N +T+N ++ + + G +Q A E+++E R + ++ ++++
Sbjct: 281 DGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLM 340
Query: 122 SAY---NNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFI 178
Y N + + L L R PD VT +++ G + + G V I
Sbjct: 341 DGYCMQNRLSEANNMLDLMVR----NKCSPDIVTFTSLIKGYCMVKRVD--DGMKVFRNI 394
Query: 179 VKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVER----NVLSWTALICGAAQWGFC 234
K G NA + LV + + G ++ A +F+ MV +V+++ L+ G G
Sbjct: 395 SKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKL 454
Query: 235 EEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASL 294
E+AL +FE ++ + + + +T ++ G VE+ F + G++P V Y +
Sbjct: 455 EKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVM 514
Query: 295 VYLVGKSGRLEEAYEIIKTMKVE---PNVVVFGSFLSACKEHKQFEMAERVIEQV 346
+ + K G L EA +++ M+ + PN + + + A + ++IE++
Sbjct: 515 ISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEM 569
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 123/272 (45%), Gaps = 16/272 (5%)
Query: 57 NCLLNAYVLLSFL-DACILFDEMPNR----NTVTWNTMIVGYSRSGDVQRAREVFE---- 107
N LL+ +V L +A L+ EM R N +T+NT++ GY + A + +
Sbjct: 302 NVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVR 361
Query: 108 EAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLG 167
D V+ +S+I Y + G+ +FR + G+ + VT ++ G G +
Sbjct: 362 NKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISK-RGLVANAVTYSILVQGFCQSGKIK 420
Query: 168 LLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELM----VERNVLSWTA 223
L + + +V +G + L++ G L A +FE + ++ ++ +T
Sbjct: 421 L--AEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTT 478
Query: 224 LICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYG 283
+I G + G E+A +F + GV+PN +T+T ++S G + E + +E+ G
Sbjct: 479 IIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDG 538
Query: 284 MEPKVHHYASLVYLVGKSGRLEEAYEIIKTMK 315
P Y +L+ + G L + ++I+ MK
Sbjct: 539 NAPNDCTYNTLIRAHLRDGDLTASAKLIEEMK 570
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/275 (20%), Positives = 119/275 (43%), Gaps = 21/275 (7%)
Query: 116 SLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVH 175
+L+ MI+ + + S+ +V+ G +PD T ++ G L GK
Sbjct: 125 TLNIMINCFCRCCKTCFAYSVLGKVMKL-GYEPDTTTFNTLIKGL-------FLEGKVSE 176
Query: 176 GFI-----VKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNV----LSWTALIC 226
+ V+NG + + ++VN + G A + M ERNV +++ +I
Sbjct: 177 AVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIID 236
Query: 227 GAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEP 286
+ G + A+ +F++M G++ + +T+ ++ AG +G K + + P
Sbjct: 237 SLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVP 296
Query: 287 KVHHYASLVYLVGKSGRLEEAYEIIKTM---KVEPNVVVFGSFLSACKEHKQFEMAERVI 343
V + L+ + K G+L+EA E+ K M + PN++ + + + + A ++
Sbjct: 297 NVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNML 356
Query: 344 EQVLRMVKPEDDRGIYRLIHDLYVMGEKWEEAAKL 378
+ ++R D LI Y M ++ ++ K+
Sbjct: 357 DLMVRNKCSPDIVTFTSLIKG-YCMVKRVDDGMKV 390
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 127/261 (48%), Gaps = 15/261 (5%)
Query: 82 NTVTWNTMIVGYSRSGDVQRAREVFEEAPQR------DSVSLSSMISAYNNIGSSKQGLS 135
+++T+ ++I + G++ A EV E + D+ S++IS + IG + L
Sbjct: 133 SSLTFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKIGKPELALG 192
Query: 136 LFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVN 195
F + + P+ VT ++S +G + + + + + G+E + + ++
Sbjct: 193 FFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEV--RDLVRRLEDEGFEFDCVFYSNWIH 250
Query: 196 MYAKGGVLRNAAMVFELMVE----RNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRP 251
Y KGG L +A M MVE R+V+S++ LI G ++ G EEAL + KM GV P
Sbjct: 251 GYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEP 310
Query: 252 NELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEII 311
N +T+T ++ G +EE F I G+E Y +L+ + + G L A+ ++
Sbjct: 311 NLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSML 370
Query: 312 KTMK---VEPNVVVFGSFLSA 329
M+ ++P+++ + + ++
Sbjct: 371 GDMEQRGIQPSILTYNTVING 391
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 86/362 (23%), Positives = 160/362 (44%), Gaps = 69/362 (19%)
Query: 50 PTHLHVANCLLNAYVLL-SFLDACILFDEMP----NRNTVTWNTMIVGYSRSGDVQRARE 104
P L + N LL A++L+ ++ +A L+ MP +T T+ TMI GY ++G ++ A E
Sbjct: 444 PMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALE 503
Query: 105 VFEEAPQRDSVSLSSMISAYNNIGSS--KQGLSLFRRVLLFE----GIKPDQVTAGAVLS 158
+F E ++ SVS + YN I + K+G+ +L E G+ D T+ +L
Sbjct: 504 MFNEL-RKSSVSAAV---CYNRIIDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLH 559
Query: 159 GC-AHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVN----MYAKGGVLRNAAMVFELM 213
A+ G G+L V+G +LN+++ ++N + K G A V+ +M
Sbjct: 560 SIHANGGDKGILG--LVYGL-----EQLNSDVCLGMLNDAILLLCKRGSFEAAIEVYMIM 612
Query: 214 VER--------------------------------------NVLSWTALICGAAQWGFCE 235
+ +V+ +T +I G + GF
Sbjct: 613 RRKGLTVTFPSTILKTLVDNLRSLDAYLLVVNAGETTLSSMDVIDYTIIINGLCKEGFLV 672
Query: 236 EALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLV 295
+AL + + GV N +T+ +++ G + E R F +E+ G+ P Y L+
Sbjct: 673 KALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILI 732
Query: 296 YLVGKSGRLEEAYEIIKTMKVE---PNVVVFGSFLSACKEHKQFEMAERVI-EQVLRMVK 351
+ K G +A +++ +M + PN++++ S + + Q E A RV+ +++ V
Sbjct: 733 DNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVT 792
Query: 352 PE 353
P+
Sbjct: 793 PD 794
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 70/330 (21%), Positives = 138/330 (41%), Gaps = 50/330 (15%)
Query: 74 LFDEMPNRNTVTWNTMIVGYSRSGDVQRA----REVFEEAPQRDSVSLSSMISAYNNIGS 129
L DE + V ++ I GY + G + A RE+ E+ RD VS S +I + G+
Sbjct: 233 LEDEGFEFDCVFYSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGN 292
Query: 130 SKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAEL 189
++ L L + ++ EG++P+ +T A++ G MG L + I+ G E++ L
Sbjct: 293 VEEALGLLGK-MIKEGVEPNLITYTAIIRGLCKMGKLE--EAFVLFNRILSVGIEVDEFL 349
Query: 190 GATLVNMYAKGGVLRNAAMVFELMVER----NVLSWTALICGAAQWGFCEEA-------- 237
TL++ + G L A + M +R ++L++ +I G G EA
Sbjct: 350 YVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEVSKGVV 409
Query: 238 --LVVFEKMRVAGVR-------------------PNELTFTGVL-SACAHAGLVEEGRRY 275
++ + + + ++ P +L +L A G E
Sbjct: 410 GDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADAL 469
Query: 276 FKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVE--PNVVVFGSFLSACKEH 333
++ + + + P YA+++ K+G++EEA E+ ++ V + + A +
Sbjct: 470 YRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELRKSSVSAAVCYNRIIDALCKK 529
Query: 334 KQFEMAERVIEQVLRMVKPEDDRGIYRLIH 363
+ A V+ ++ ++G+Y IH
Sbjct: 530 GMLDTATEVLIELW-------EKGLYLDIH 552
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 143/309 (46%), Gaps = 21/309 (6%)
Query: 70 DACILFDEMPNR----NTVTWNTMI---VGYSRSGDVQRA-REVFEEAPQRDSVSLSSMI 121
DA LF EM N+ + T++++I Y R D R ++ E + V+ S++I
Sbjct: 276 DALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALI 335
Query: 122 SAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSG-CAHMGSLGLLAGKSVHGFIVK 180
A+ G + L+ ++ I PD T ++++G C H L K + ++
Sbjct: 336 DAFVKEGKLVEAEKLYDE-MIKRSIDPDIFTYSSLINGFCMHDR---LDEAKHMFELMIS 391
Query: 181 NGWELNAELGATLVNMYAKGGVLRNAAMVFELMVER----NVLSWTALICGAAQWGFCEE 236
N +TL+ + K + +F M +R N +++T LI G Q C+
Sbjct: 392 KDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDN 451
Query: 237 ALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVY 296
A +VF++M GV PN LT+ +L G + + F+ ++ MEP ++ Y ++
Sbjct: 452 AQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIE 511
Query: 297 LVGKSGRLEEAYEIIKTMK---VEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPE 353
+ K+G++E+ +E+ + V PNV+ + + +S E A+ ++++ ++ P
Sbjct: 512 GMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKK-MKEDGPL 570
Query: 354 DDRGIYRLI 362
+ G Y +
Sbjct: 571 PNSGTYNTL 579
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 79/362 (21%), Positives = 158/362 (43%), Gaps = 56/362 (15%)
Query: 1 MHLYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLL 60
++L++++ G+ D F +L SC + + L + +I+ P ++ + L+
Sbjct: 278 LNLFTEMDNKGIRPDVFTYS-SLISCLCNYGRWSDASRLLSDMIERKINP-NVVTFSALI 335
Query: 61 NAYVLL-SFLDACILFDEMPNR----NTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDS- 114
+A+V ++A L+DEM R + T++++I G+ + A+ +FE +D
Sbjct: 336 DAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF 395
Query: 115 ---VSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAG 171
V+ S++I + ++G+ LFR M GL+
Sbjct: 396 PNVVTYSTLIKGFCKAKRVEEGMELFR-----------------------EMSQRGLVGN 432
Query: 172 KSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVE----RNVLSWTALICG 227
+ TL++ + + NA MVF+ MV N+L++ L+ G
Sbjct: 433 TVTY---------------TTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDG 477
Query: 228 AAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPK 287
+ G +A+VVFE ++ + + P+ T+ ++ AG VE+G F + G+ P
Sbjct: 478 LCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPN 537
Query: 288 VHHYASLVYLVGKSGRLEEAYEIIKTMKVE---PNVVVFGSFLSACKEHKQFEMAERVIE 344
V Y +++ + G EEA ++K MK + PN + + + A E + +I+
Sbjct: 538 VIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIK 597
Query: 345 QV 346
++
Sbjct: 598 EM 599
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/328 (20%), Positives = 132/328 (40%), Gaps = 74/328 (22%)
Query: 25 SCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLLNAYVLLSFL-DACILFDEMP---- 79
+C L++ + A ++KLG+ P + +++ LLN Y + DA L D+M
Sbjct: 126 NCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSS-LLNGYCHSKRISDAVALVDQMVEMGY 184
Query: 80 NRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRR 139
+T T+ T+I G A + ++ QR
Sbjct: 185 KPDTFTFTTLIHGLFLHNKASEAVALVDQMVQR--------------------------- 217
Query: 140 VLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAK 199
G +PD VT G V++G G + +L +L+ K
Sbjct: 218 -----GCQPDLVTYGTVVNGLCKRGDI---------------------DLALSLLKKMEK 251
Query: 200 GGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGV 259
G + E +V+ + +I G ++ ++AL +F +M G+RP+ T++ +
Sbjct: 252 GKI------------EADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSL 299
Query: 260 LSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTM---KV 316
+S + G + R + + + P V +++L+ K G+L EA ++ M +
Sbjct: 300 ISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 359
Query: 317 EPNVVVFGSFLSACKEHKQFEMAERVIE 344
+P++ + S ++ H + + A+ + E
Sbjct: 360 DPDIFTYSSLINGFCMHDRLDEAKHMFE 387
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 71/324 (21%), Positives = 146/324 (45%), Gaps = 25/324 (7%)
Query: 70 DACILFDEM----PNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYN 125
DA LF +M P + V +N ++ ++ + + V Q ++ +S + Y+
Sbjct: 66 DAVDLFGDMVKSRPFPSIVEFNKLLSAVAK---MNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 126 ---NIGSSKQGLSLFRRVL---LFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIV 179
N + LSL VL + G +PD VT ++L+G H S + ++ +V
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCH--SKRISDAVALVDQMV 180
Query: 180 KNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVER----NVLSWTALICGAAQWGFCE 235
+ G++ + TL++ A + + MV+R +++++ ++ G + G +
Sbjct: 181 EMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDID 240
Query: 236 EALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLV 295
AL + +KM + + + + ++ +++ F +++ G+ P V Y+SL+
Sbjct: 241 LALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLI 300
Query: 296 YLVGKSGRLEEAYEIIKTM---KVEPNVVVFGSFLSA-CKEHKQFEMAERVIEQVLRMVK 351
+ GR +A ++ M K+ PNVV F + + A KE K E + E + R +
Sbjct: 301 SCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 360
Query: 352 PEDDRGIYRLIHDLYVMGEKWEEA 375
P D Y + + + M ++ +EA
Sbjct: 361 P--DIFTYSSLINGFCMHDRLDEA 382
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/288 (22%), Positives = 129/288 (44%), Gaps = 24/288 (8%)
Query: 37 QHLHAHIIKLGFAPTHLHVANCLLNAYVLLSFLD-ACILFDEMPNR----NTVTWNTMIV 91
+ L+ +IK P + + L+N + + LD A +F+ M ++ N VT++T+I
Sbjct: 348 EKLYDEMIKRSIDP-DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIK 406
Query: 92 GYSRSGDVQRAREVFEEAPQR----DSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIK 147
G+ ++ V+ E+F E QR ++V+ +++I + +F++++ G+
Sbjct: 407 GFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSV-GVH 465
Query: 148 PDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAA 207
P+ +T +L G G L V ++ ++ E + ++ K G + +
Sbjct: 466 PNILTYNILLDGLCKNGKLA--KAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGW 523
Query: 208 MVFELM----VERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSAC 263
+F + V NV+++ +I G + G EEA + +KM+ G PN T+ ++ A
Sbjct: 524 ELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRAR 583
Query: 264 AHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGK---SGRLEEAY 308
G E K + G AS + LV GRL++++
Sbjct: 584 LRDGDREASAELIKEMRSCGFAGD----ASTIGLVTNMLHDGRLDKSF 627
>AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15661092-15662705 FORWARD
LENGTH=537
Length = 537
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 97/183 (53%), Gaps = 3/183 (1%)
Query: 168 LLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICG 227
L K VH FI + + +++ MY+ G + +A VF M ERN+ +W +I
Sbjct: 197 LQEAKVVHEFITSSVGISDISAYNSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRC 256
Query: 228 AAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFK-MIEDYGMEP 286
A+ G E+A+ F + + G +P+ F + AC G + EG +F+ M ++YG+ P
Sbjct: 257 FAKNGQGEDAIDTFSRFKQEGNKPDGEMFKEIFFACGVLGDMNEGLLHFESMYKEYGIIP 316
Query: 287 KVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQV 346
+ HY SLV ++ + G L+EA +++M EPNV ++ + ++ + H + +R + V
Sbjct: 317 CMEHYVSLVKMLAEPGYLDEALRFVESM--EPNVDLWETLMNLSRVHGDLILGDRCQDMV 374
Query: 347 LRM 349
++
Sbjct: 375 EQL 377
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 137/286 (47%), Gaps = 17/286 (5%)
Query: 74 LFDEMPNR----NTVTWNTMI---VGYSRSGDVQRA-REVFEEAPQRDSVSLSSMISAYN 125
LF EM + N VT+N++I Y R D R + E+ + V+ +++I A+
Sbjct: 280 LFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFF 339
Query: 126 NIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSG-CAHMGSLGLLAGKSVHGFIVKNGWE 184
G + L ++ I PD +T +++G C H L K + F+V
Sbjct: 340 KEGKLVEAEKLHEE-MIQRSIDPDTITYNLLINGFCMHNR---LDEAKQMFKFMVSKDCL 395
Query: 185 LNAELGATLVNMYAKGGVLRNAAMVFELMVER----NVLSWTALICGAAQWGFCEEALVV 240
N + TL+N + K + + +F M +R N +++T +I G Q G C+ A +V
Sbjct: 396 PNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMV 455
Query: 241 FEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGK 300
F++M V + +T++ +L G ++ FK ++ ME + Y +++ + K
Sbjct: 456 FKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCK 515
Query: 301 SGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQV 346
+G++ EA+++ ++ ++P+VV + + +S + + A+ + ++
Sbjct: 516 AGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKM 561
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 76/327 (23%), Positives = 150/327 (45%), Gaps = 25/327 (7%)
Query: 70 DACILFDEM----PNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYN 125
DA LF +M P + V +N ++ ++ + + V Q ++ +S + Y+
Sbjct: 66 DAVDLFGDMVKSRPFPSIVEFNKLLSAVAK---MNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 126 ---NIGSSKQGLSLFRRVL---LFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIV 179
N + LSL VL + G +PD VT ++L+G H S + ++ +V
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCH--SKRISDAVALVDQMV 180
Query: 180 KNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVER----NVLSWTALICGAAQWGFCE 235
+ G++ + TL++ A + + MV+R +++++ ++ G + G +
Sbjct: 181 EMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDID 240
Query: 236 EALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLV 295
AL + KM A ++ N + F ++ + VE F +E G+ P V Y SL+
Sbjct: 241 LALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLI 300
Query: 296 YLVGKSGRLEEAYEIIKTM---KVEPNVVVFGSFLSACKEHKQFEMAERVIEQVL-RMVK 351
+ GR +A ++ M K+ PNVV F + + A + + AE++ E+++ R +
Sbjct: 301 NCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSID 360
Query: 352 PEDDRGIYRLIHDLYVMGEKWEEAAKL 378
P D Y L+ + + M + +EA ++
Sbjct: 361 P--DTITYNLLINGFCMHNRLDEAKQM 385
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 118/254 (46%), Gaps = 21/254 (8%)
Query: 37 QHLHAHIIKLGFAPTHLHVANCLLNAYVLLSFLD-ACILFDEMPNR----NTVTWNTMIV 91
+ LH +I+ P + N L+N + + + LD A +F M ++ N T+NT+I
Sbjct: 348 EKLHEEMIQRSIDPDTI-TYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLIN 406
Query: 92 GYSRSGDVQRAREVFEEAPQR----DSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIK 147
G+ + V+ E+F E QR ++V+ +++I + G +F++ ++ +
Sbjct: 407 GFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQ-MVSNRVP 465
Query: 148 PDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAA 207
D +T +L G G L + ++ K+ ELN + T++ K G + A
Sbjct: 466 TDIMTYSILLHGLCSYGKLD--TALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAW 523
Query: 208 MVF-ELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSA---- 262
+F L ++ +V+++ +I G +EA +F KM+ G PN T+ ++ A
Sbjct: 524 DLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRD 583
Query: 263 ---CAHAGLVEEGR 273
A A L++E R
Sbjct: 584 CDRAASAELIKEMR 597
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/244 (20%), Positives = 111/244 (45%), Gaps = 20/244 (8%)
Query: 113 DSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGK 172
D V+LSS+++ Y + ++L +++ G KPD T ++ G L K
Sbjct: 152 DIVTLSSLLNGYCHSKRISDAVALVDQMVEM-GYKPDTFTFTTLIHGL-------FLHNK 203
Query: 173 SVHGF-----IVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELM----VERNVLSWTA 223
+ +V+ G + + T+VN K G + A + M ++ NV+ +
Sbjct: 204 ASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNT 263
Query: 224 LICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYG 283
+I ++ E A+ +F +M G+RPN +T+ +++ + G + R + +
Sbjct: 264 IIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKK 323
Query: 284 MEPKVHHYASLVYLVGKSGRLEEAYEIIKTM---KVEPNVVVFGSFLSACKEHKQFEMAE 340
+ P V + +L+ K G+L EA ++ + M ++P+ + + ++ H + + A+
Sbjct: 324 INPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAK 383
Query: 341 RVIE 344
++ +
Sbjct: 384 QMFK 387
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 89/397 (22%), Positives = 183/397 (46%), Gaps = 70/397 (17%)
Query: 5 SKLHRTGVPFDSFCIVFTLKSCTS------HLHSLTIIQHLHAHIIKLGFAPTHLHVANC 58
S+ HR VP ++ C + L+ I + I+ GF P +++V N
Sbjct: 196 SRKHRFDVP---------IRGCGNLLDRMMKLNPTGTIWGFYMEILDAGF-PLNVYVFNI 245
Query: 59 LLNAYVLLSFL-DACILFDEMPNRN----TVTWNTMIVGYSRSGDVQ---RAREVFEEAP 110
L+N + + DA +FDE+ R+ V++NT+I GY + G++ R + E++
Sbjct: 246 LMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSR 305
Query: 111 QR-DSVSLSSMISAY-----------------------NNI-------GSSKQG-LSLFR 138
R D + S++I+A N++ G S+ G + L +
Sbjct: 306 TRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMK 365
Query: 139 ---RVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVN 195
+ +L +G++PD V +++G G L +A +++ +++ G + TL++
Sbjct: 366 ESYQKMLSKGLQPDIVLYNTLVNGFCKNGDL--VAARNIVDGMIRRGLRPDKITYTTLID 423
Query: 196 MYAKGGVLRNAAMVFELM----VERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRP 251
+ +GG + A + + M +E + + ++AL+CG + G +A +M AG++P
Sbjct: 424 GFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKP 483
Query: 252 NELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEII 311
+++T+T ++ A G + G + K ++ G P V Y L+ + K G+++ A ++
Sbjct: 484 DDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLL 543
Query: 312 KTM---KVEPNVVVFGSFLSACKEHKQFEMAERVIEQ 345
M V P+ + + + L H+ ++R I++
Sbjct: 544 DAMLNIGVVPDDITYNTLLEG--HHRHANSSKRYIQK 578
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/242 (20%), Positives = 118/242 (48%), Gaps = 15/242 (6%)
Query: 157 LSGCAHMGS--LGLLAGKSVHGF---IVKNGWELNAELGATLVNMYAKGGVLRNAAMVFE 211
+ GC ++ + L ++ GF I+ G+ LN + L+N + K G + +A VF+
Sbjct: 205 IRGCGNLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFD 264
Query: 212 LMVERN----VLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAG 267
+ +R+ V+S+ LI G + G +E + +M + RP+ T++ +++A
Sbjct: 265 EITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKEN 324
Query: 268 LVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLE---EAYEIIKTMKVEPNVVVFG 324
++ F + G+ P + +L++ ++G ++ E+Y+ + + ++P++V++
Sbjct: 325 KMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYN 384
Query: 325 SFLSACKEHKQFEMAERVIEQVLRM-VKPEDDRGIYRLIHDLYVMGEKWEEAAKLGPGFD 383
+ ++ ++ A +++ ++R ++P D+ Y + D + G E A ++ D
Sbjct: 385 TLVNGFCKNGDLVAARNIVDGMIRRGLRP--DKITYTTLIDGFCRGGDVETALEIRKEMD 442
Query: 384 FN 385
N
Sbjct: 443 QN 444
>AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10387673-10389100 FORWARD
LENGTH=475
Length = 475
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 92/184 (50%), Gaps = 1/184 (0%)
Query: 167 GLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALIC 226
L A + VH I+ + ++ MY+ + +A VFE M E N + ++
Sbjct: 134 ALEAARVVHECIIALVSPCDVGARNAIIEMYSGCCSVDDALKVFEEMPEWNSGTLCVMMR 193
Query: 227 GAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFK-MIEDYGME 285
G+ EEA+ +F + + G +PN F V S C G V+EG F+ M +YG+
Sbjct: 194 CFVNNGYGEEAIDLFTRFKEEGNKPNGEIFNQVFSTCTLTGDVKEGSLQFQAMYREYGIV 253
Query: 286 PKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQ 345
P + HY S+ ++ SG L+EA ++ M +EP+V V+ + ++ + H E+ +R E
Sbjct: 254 PSMEHYHSVTKMLATSGHLDEALNFVERMPMEPSVDVWETLMNLSRVHGDVELGDRCAEL 313
Query: 346 VLRM 349
V ++
Sbjct: 314 VEKL 317
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 134/285 (47%), Gaps = 21/285 (7%)
Query: 70 DACILFDEMPNR----NTVTWNTMI---VGYSRSGDVQRA-REVFEEAPQRDSVSLSSMI 121
DA LF EM + N VT++++I Y R D R ++ E D + S++I
Sbjct: 274 DALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALI 333
Query: 122 SAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSG-CAHMGSLGLLAGKSVHGFIVK 180
A+ G + L+ ++ I P VT ++++G C H L K + F+V
Sbjct: 334 DAFVKEGKLVEAEKLYDE-MVKRSIDPSIVTYSSLINGFCMHDR---LDEAKQMFEFMVS 389
Query: 181 NGWELNAELGATLVNMYAKGGVLRNAAMVFELMVER----NVLSWTALICGAAQWGFCEE 236
+ TL+ + K + VF M +R N +++ LI G Q G C+
Sbjct: 390 KHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDM 449
Query: 237 ALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVY 296
A +F++M GV PN +T+ +L G +E+ F+ ++ MEP ++ Y ++
Sbjct: 450 AQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIE 509
Query: 297 LVGKSGRLEEAYEIIKTMK---VEPNVVVFGSFLSA-CKEHKQFE 337
+ K+G++E+ +++ + V+P+VV + + +S C++ + E
Sbjct: 510 GMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEE 554
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 73/344 (21%), Positives = 152/344 (44%), Gaps = 47/344 (13%)
Query: 13 PFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLLNAYVLLSFLD-A 71
PF S L S + ++ ++ L + LG H + + L+N + S L A
Sbjct: 77 PFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNH-YTYSILINCFCRRSQLPLA 135
Query: 72 CILFDEMPN----RNTVTWNTMIVGYSRSGDVQRA----REVFEEAPQRDSVSLSSMISA 123
+ +M N VT ++++ GY S + A ++F Q ++V+ +++I
Sbjct: 136 LAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHG 195
Query: 124 YNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGW 183
+ + ++L R ++ +G +PD VT G V++G G
Sbjct: 196 LFLHNKASEAMALIDR-MVAKGCQPDLVTYGVVVNGLCKRG------------------- 235
Query: 184 ELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEK 243
+ +L L+N +G + E VL + +I G ++ ++AL +F++
Sbjct: 236 --DTDLAFNLLNKMEQGKL------------EPGVLIYNTIIDGLCKYKHMDDALNLFKE 281
Query: 244 MRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGR 303
M G+RPN +T++ ++S + G + R + + + P V +++L+ K G+
Sbjct: 282 METKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGK 341
Query: 304 LEEAYEIIKTM---KVEPNVVVFGSFLSACKEHKQFEMAERVIE 344
L EA ++ M ++P++V + S ++ H + + A+++ E
Sbjct: 342 LVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFE 385
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/337 (20%), Positives = 147/337 (43%), Gaps = 47/337 (13%)
Query: 22 TLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLLNAYVLL-SFLDACILFDEMPN 80
+L SC + + L + +I+ P + + L++A+V ++A L+DEM
Sbjct: 296 SLISCLCNYGRWSDASRLLSDMIERKINP-DVFTFSALIDAFVKEGKLVEAEKLYDEMVK 354
Query: 81 RNT----VTWNTMIVGYSRSGDVQRAREVFEEAPQR----DSVSLSSMISAYNNIGSSKQ 132
R+ VT++++I G+ + A+++FE + D V+ +++I + ++
Sbjct: 355 RSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEE 414
Query: 133 GLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGAT 192
G+ +FR + G+ + VT ++ G G + + + +V +G
Sbjct: 415 GMEVFRE-MSQRGLVGNTVTYNILIQGLFQAGDCDM--AQEIFKEMVSDG---------- 461
Query: 193 LVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPN 252
V N++++ L+ G + G E+A+VVFE ++ + + P
Sbjct: 462 ---------------------VPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPT 500
Query: 253 ELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIK 312
T+ ++ AG VE+G F + G++P V Y +++ + G EEA + K
Sbjct: 501 IYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFK 560
Query: 313 TMKVE---PNVVVFGSFLSACKEHKQFEMAERVIEQV 346
MK + PN + + + A E + +I+++
Sbjct: 561 EMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEM 597
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 129/288 (44%), Gaps = 24/288 (8%)
Query: 37 QHLHAHIIKLGFAPTHLHVANCLLNAYVLLSFLD-ACILFDEMPNR----NTVTWNTMIV 91
+ L+ ++K P+ + ++ L+N + + LD A +F+ M ++ + VT+NT+I
Sbjct: 346 EKLYDEMVKRSIDPSIVTYSS-LINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIK 404
Query: 92 GYSRSGDVQRAREVFEEAPQR----DSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIK 147
G+ + V+ EVF E QR ++V+ + +I G +F+ ++ +G+
Sbjct: 405 GFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKE-MVSDGVP 463
Query: 148 PDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAA 207
P+ +T +L G G L V ++ ++ E ++ K G + +
Sbjct: 464 PNIMTYNTLLDGLCKNGKLE--KAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGW 521
Query: 208 MVFELM----VERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSAC 263
+F + V+ +V+++ +I G + G EEA +F++M+ G PN + ++ A
Sbjct: 522 DLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRAR 581
Query: 264 AHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGK---SGRLEEAY 308
G E K + G AS + LV GRL++++
Sbjct: 582 LRDGDREASAELIKEMRSCGFAGD----ASTIGLVTNMLHDGRLDKSF 625
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/247 (21%), Positives = 110/247 (44%), Gaps = 22/247 (8%)
Query: 145 GIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLR 204
G +P+ VT ++L+G H + F+ G++ N TL++ G L
Sbjct: 146 GYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT--GYQPNTVTFNTLIH----GLFLH 199
Query: 205 NAAMVFELMVER--------NVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTF 256
N A +++R +++++ ++ G + G + A + KM + P L +
Sbjct: 200 NKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIY 259
Query: 257 TGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTM-- 314
++ +++ FK +E G+ P V Y+SL+ + GR +A ++ M
Sbjct: 260 NTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIE 319
Query: 315 -KVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPEDDRGI--YRLIHDLYVMGEK 371
K+ P+V F + + A + + AE++ ++ MVK D I Y + + + M ++
Sbjct: 320 RKINPDVFTFSALIDAFVKEGKLVEAEKLYDE---MVKRSIDPSIVTYSSLINGFCMHDR 376
Query: 372 WEEAAKL 378
+EA ++
Sbjct: 377 LDEAKQM 383
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/352 (22%), Positives = 164/352 (46%), Gaps = 23/352 (6%)
Query: 16 SFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLLNAYVLLSFLDACI-L 74
++ + T + H HSL L + + K G P + + N ++NA LD + +
Sbjct: 356 TYTTLVTALTRQKHFHSLL---SLISKVEKNGLKPDTI-LFNAIINASSESGNLDQAMKI 411
Query: 75 FDEMPNR----NTVTWNTMIVGYSRSGDVQRAREVFE-----EAPQRDSVSLSSMISAYN 125
F++M T+NT+I GY + G ++ + + + E Q + + + ++ A+
Sbjct: 412 FEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWC 471
Query: 126 NIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWEL 185
N ++ ++ ++ + G+KPD VT + A +GS A + ++ N +
Sbjct: 472 NQRKIEEAWNIVYKMQSY-GVKPDVVTFNTLAKAYARIGST-CTAEDMIIPRMLHNKVKP 529
Query: 186 NAELGATLVNMYAKGGVLRNAAMVF----ELMVERNVLSWTALICGAAQWGFCEEALVVF 241
N T+VN Y + G + A F EL V N+ + +LI G + V
Sbjct: 530 NVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVV 589
Query: 242 EKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKS 301
+ M GV+P+ +TF+ +++A + G ++ + + + G++P +H ++ L ++
Sbjct: 590 DLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARA 649
Query: 302 GRLEEAYEIIKTMK---VEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMV 350
G E+A +I+ M+ V PNVV++ +S + + A +V +++ +V
Sbjct: 650 GEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIV 701
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 81/364 (22%), Positives = 160/364 (43%), Gaps = 52/364 (14%)
Query: 1 MHLYSKLHRTGVPFDSFCIVFT-LKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCL 59
+ L SK+ + G+ D+ I+F + + +S +L + + + G PT N L
Sbjct: 374 LSLISKVEKNGLKPDT--ILFNAIINASSESGNLDQAMKIFEKMKESGCKPTA-STFNTL 430
Query: 60 LNAYVLLSFLDAC------ILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAP--- 110
+ Y + L+ +L DEM N T N ++ + ++ A + +
Sbjct: 431 IKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYG 490
Query: 111 -QRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSL--- 166
+ D V+ +++ AY IGS+ + +L +KP+ T G +++G G +
Sbjct: 491 VKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEA 550
Query: 167 --------------GLLAGKS-VHGFIVKNGWE-------LNAELG--------ATLVNM 196
L S + GF+ N + L E G +TL+N
Sbjct: 551 LRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNA 610
Query: 197 YAKGGVLRNAAMVFELMVE----RNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPN 252
++ G ++ ++ M+E ++ +++ L G A+ G E+A + +MR GVRPN
Sbjct: 611 WSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPN 670
Query: 253 ELTFTGVLSACAHAGLVEEGRR-YFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEII 311
+ +T ++S AG +++ + Y KM G+ P + Y +L++ G++ + +A E++
Sbjct: 671 VVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELL 730
Query: 312 KTMK 315
K M+
Sbjct: 731 KDME 734
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/287 (21%), Positives = 128/287 (44%), Gaps = 21/287 (7%)
Query: 82 NTVTWNTMIVGYSRSGDVQRAREVFEEAPQR----DSVSLSSMISAYNNIGSSKQGLSLF 137
+T+ +N +I S SG++ +A ++FE+ + + + +++I Y IG ++ L
Sbjct: 388 DTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLL 447
Query: 138 RRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVK---NGWELNAELGATLV 194
+L E ++P+ T ++ + + + + K G + + TL
Sbjct: 448 DMMLRDEMLQPNDRTCNILVQAWCNQRKI-----EEAWNIVYKMQSYGVKPDVVTFNTLA 502
Query: 195 NMYAK-GGVLRNAAMVFELM----VERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGV 249
YA+ G M+ M V+ NV + ++ G + G EEAL F +M+ GV
Sbjct: 503 KAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGV 562
Query: 250 RPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYL---VGKSGRLEE 306
PN F ++ + ++ ++E++G++P V +++L+ VG R EE
Sbjct: 563 HPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEE 622
Query: 307 AYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRM-VKP 352
Y + ++P++ F + E AE+++ Q+ + V+P
Sbjct: 623 IYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRP 669
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/170 (20%), Positives = 84/170 (49%), Gaps = 9/170 (5%)
Query: 193 LVNMYAKGGVLRNAAMVFELMVER----NVLSWTALICGAAQWGFCEEALVVFEKMRVAG 248
L+N + G + A +F ++E +++++T L+ + L + K+ G
Sbjct: 325 LMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNG 384
Query: 249 VRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAY 308
++P+ + F +++A + +G +++ + F+ +++ G +P + +L+ GK G+LEE+
Sbjct: 385 LKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESS 444
Query: 309 EIIKTM----KVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRM-VKPE 353
++ M ++PN + A ++ E A ++ ++ VKP+
Sbjct: 445 RLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPD 494
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 129/279 (46%), Gaps = 18/279 (6%)
Query: 47 GFAPTHLHVANCLLNAYVLLSFLD-ACILFDEMPNRNTV----TWNTMIVGYSRSGDVQR 101
G P+ + + NC+L V L ++ A +FDEM R V ++ M++G R G +Q
Sbjct: 177 GLTPSSITM-NCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQE 235
Query: 102 AREVFEEAPQR----DSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVL 157
A QR D+ + + +++A G + + FR+++ G KP+ + +++
Sbjct: 236 ADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDL-GFKPNLINFTSLI 294
Query: 158 SGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVER- 216
G GS+ + +V+NGW+ N L++ K G A +F +V
Sbjct: 295 DGLCKKGSIK--QAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSD 352
Query: 217 ----NVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEG 272
NV ++T++I G + A ++F +M+ G+ PN T+T +++ AG
Sbjct: 353 TYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRA 412
Query: 273 RRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEII 311
++ D G P ++ Y + + + K R EAYE++
Sbjct: 413 YELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELL 451
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 79/370 (21%), Positives = 151/370 (40%), Gaps = 32/370 (8%)
Query: 7 LHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLLNAYVLL 66
+ R +P ++ C + C + L + I +I LGF P ++ + +
Sbjct: 244 IQRGFIPDNATCTLILTALCENGLVNRAI--WYFRKMIDLGFKPNLINFTSLIDGLCKKG 301
Query: 67 SFLDACILFDEMPNR----NTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSV-----SL 117
S A + +EM N T +I G + G ++A +F + + D+ +
Sbjct: 302 SIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTY 361
Query: 118 SSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLG----LLAGKS 173
+SMI Y + LF R + +G+ P+ T +++G GS G L+
Sbjct: 362 TSMIGGYCKEDKLNRAEMLFSR-MKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMG 420
Query: 174 VHGFIVKNGWELNAELGATLVNMYAKGGV-LRNAAMVFELMVERNVLSWTALICGAAQWG 232
GF+ N + NA + + A L N A F +E + +++T LI +
Sbjct: 421 DEGFM-PNIYTYNAAIDSLCKKSRAPEAYELLNKA--FSCGLEADGVTYTILIQEQCKQN 477
Query: 233 FCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYA 292
+AL F +M G + +++A ++E R F+++ G+ P Y
Sbjct: 478 DINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYT 537
Query: 293 SLVYLVGKSGRLEEAYEIIKTMK---VEPNVVVFGSFLSA-CKEHKQFEMAERVIEQVLR 348
S++ K G ++ A + MK P+ +GS +S CK+ ++++ +
Sbjct: 538 SMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKS--------MVDEACK 589
Query: 349 MVKPEDDRGI 358
+ + DRG+
Sbjct: 590 LYEAMIDRGL 599
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 76/155 (49%), Gaps = 7/155 (4%)
Query: 201 GVLRNAAMVFELMVERNVL----SWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTF 256
G++ A VF+ M R V+ S+ ++ G + G +EA M G P+ T
Sbjct: 196 GLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATC 255
Query: 257 TGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKV 316
T +L+A GLV YF+ + D G +P + ++ SL+ + K G +++A+E+++ M
Sbjct: 256 TLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVR 315
Query: 317 ---EPNVVVFGSFLSACKEHKQFEMAERVIEQVLR 348
+PNV + + + E A R+ +++R
Sbjct: 316 NGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVR 350
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/343 (23%), Positives = 145/343 (42%), Gaps = 49/343 (14%)
Query: 82 NTVTWNTMIVGYSRSGDVQRAREVF----EEAPQRDSVSLSSMISAYNNIGSSKQGLSLF 137
+ ++ ++I ++ SG + A VF E+ + ++ + +++ + +G+ ++
Sbjct: 207 DVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSL 266
Query: 138 RRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLA--------------------------G 171
+ +GI PD T +++ C GSL A G
Sbjct: 267 VEKMKSDGIAPDAYTYNTLIT-CCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYG 325
Query: 172 KS--------VHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVER----NVL 219
KS V +V NG+ + +L++ YA+ G+L A + M E+ +V
Sbjct: 326 KSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVF 385
Query: 220 SWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMI 279
++T L+ G + G E A+ +FE+MR AG +PN TF + + G E + F I
Sbjct: 386 TYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEI 445
Query: 280 EDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVE---PNVVVFGSFLSACKEHKQF 336
G+ P + + +L+ + G++G E + K MK P F + +SA F
Sbjct: 446 NVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSF 505
Query: 337 EMAERVIEQVLRM-VKPEDDRGIYRLIHDLYVMGEKWEEAAKL 378
E A V ++L V P D Y + G WE++ K+
Sbjct: 506 EQAMTVYRRMLDAGVTP--DLSTYNTVLAALARGGMWEQSEKV 546
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 135/294 (45%), Gaps = 22/294 (7%)
Query: 70 DACILFDEMP----NRNTVTWNTMIVGYSRSGDVQRAREVFEE------APQRDSVSLSS 119
+A +F+EM + + VT+N ++ Y +S + A +V E +P V+ +S
Sbjct: 297 EAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPS--IVTYNS 354
Query: 120 MISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIV 179
+ISAY G + + L + + +G KPD T +LSG G + + S+ +
Sbjct: 355 LISAYARDGMLDEAMEL-KNQMAEKGTKPDVFTYTTLLSGFERAGKVE--SAMSIFEEMR 411
Query: 180 KNGWELNAELGATLVNMYAKGGVLRNAAMVFELM----VERNVLSWTALICGAAQWGFCE 235
G + N + MY G +F+ + + ++++W L+ Q G
Sbjct: 412 NAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDS 471
Query: 236 EALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLV 295
E VF++M+ AG P TF ++SA + G E+ ++ + D G+ P + Y +++
Sbjct: 472 EVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVL 531
Query: 296 YLVGKSGRLEEAYEIIKTM---KVEPNVVVFGSFLSACKEHKQFEMAERVIEQV 346
+ + G E++ +++ M + +PN + + S L A K+ + + E+V
Sbjct: 532 AALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEV 585
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/311 (21%), Positives = 146/311 (46%), Gaps = 27/311 (8%)
Query: 58 CLLNAYVLL-----SFLDACILFDEMP----NRNTVTWNTMIVGYSRSGDVQRAREVFEE 108
C NA++ + F + +FDE+ + + VTWNT++ + ++G VF+E
Sbjct: 420 CTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKE 479
Query: 109 ------APQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAH 162
P+R++ +++ISAY+ GS +Q ++++RR +L G+ PD T VL+ A
Sbjct: 480 MKRAGFVPERET--FNTLISAYSRCGSFEQAMTVYRR-MLDAGVTPDLSTYNTVLAALAR 536
Query: 163 MGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKG---GVLRN-AAMVFELMVERNV 218
G + V + + N +L++ YA G G++ + A V+ ++E
Sbjct: 537 GGMWE--QSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRA 594
Query: 219 LSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKM 278
+ L+ ++ EA F +++ G P+ T ++S +V +
Sbjct: 595 VLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDY 654
Query: 279 IEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTM---KVEPNVVVFGSFLSACKEHKQ 335
+++ G P + Y SL+Y+ +S ++ EI++ + ++P+++ + + + A + +
Sbjct: 655 MKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTR 714
Query: 336 FEMAERVIEQV 346
A R+ ++
Sbjct: 715 MRDASRIFSEM 725
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/318 (22%), Positives = 131/318 (41%), Gaps = 59/318 (18%)
Query: 87 NTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGI 146
N +G SR ++ + +PQ V L S+I + G LS LFE
Sbjct: 74 NRTRIGKSRDPNLGKPWSYHGLSPQGQQV-LRSLIEPNFDSGQLDSVLSE-----LFEPF 127
Query: 147 KPDQVTAGAVLSGCAHMGSLGL-----LAGKSVHGFIVKNGWE--LNAELGATLVNMYAK 199
K + + L A + LG LA ++ F+ + ++ L+ + A +++M K
Sbjct: 128 KDKPESTSSEL--LAFLKGLGFHKKFDLALRAFDWFMKQKDYQSMLDNSVVAIIISMLGK 185
Query: 200 GGVLRNAAMVFELMVER----NVLSWTALICGAAQWGFCEEALVVF-------------- 241
G + +AA +F + E +V S+T+LI A G EA+ VF
Sbjct: 186 EGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLIT 245
Query: 242 ----------------------EKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMI 279
EKM+ G+ P+ T+ +++ C L +E + F+ +
Sbjct: 246 YNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEM 305
Query: 280 EDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVE---PNVVVFGSFLSACKEHKQF 336
+ G Y +L+ + GKS R +EA +++ M + P++V + S +SA
Sbjct: 306 KAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGML 365
Query: 337 EMAERVIEQVL-RMVKPE 353
+ A + Q+ + KP+
Sbjct: 366 DEAMELKNQMAEKGTKPD 383
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/327 (22%), Positives = 144/327 (44%), Gaps = 54/327 (16%)
Query: 79 PNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQR----DSVSLSSMISAYNNIGSSKQGL 134
P+R + +N + + +S D++++ ++F+E +R D+ + +++IS G K+ +
Sbjct: 171 PSREVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAV 230
Query: 135 SLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLV 194
F ++ F G +PD VT A++ G++ + S++ W ++A +TL+
Sbjct: 231 EWFEKMSSF-GCEPDNVTMAAMIDAYGRAGNVDM--ALSLYDRARTEKWRIDAVTFSTLI 287
Query: 195 NMYAKGGVLRNAAMVFELM----VERNVL--------------SWTALIC---------- 226
+Y G ++E M V+ N++ W A I
Sbjct: 288 RIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFT 347
Query: 227 -------------GAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGR 273
G A++G ++AL ++ +M+ G+ + + +LS CA V+E
Sbjct: 348 PNWSTYAALVRAYGRARYG--DDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAF 405
Query: 274 RYFKMIED-YGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMK---VEPNVVVFGSFLSA 329
F+ +++ +P ++SL+ + SGR+ EA + M+ EP + V S +
Sbjct: 406 EIFQDMKNCETCDPDSWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQC 465
Query: 330 CKEHKQFEMAERVIEQVLRMVKPEDDR 356
+ KQ + R +QVL + DDR
Sbjct: 466 YGKAKQVDDVVRTFDQVLELGITPDDR 492
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/347 (21%), Positives = 149/347 (42%), Gaps = 61/347 (17%)
Query: 74 LFDEMPNR----NTVTWNTMIVGYSRSGDVQRAREVFEEAP----QRDSVSLSSMISAYN 125
LFDEM R + T+ T+I ++G +RA E FE+ + D+V++++MI AY
Sbjct: 197 LFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYG 256
Query: 126 NIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVL---------SGCAH----MGSLGL---- 168
G+ LSL+ R E + D VT ++ GC + M +LG+
Sbjct: 257 RAGNVDMALSLYDRART-EKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNL 315
Query: 169 ----------------LAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFEL 212
K ++ ++ NG+ N A LV Y + +A ++
Sbjct: 316 VIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRARYGDDALAIYRE 375
Query: 213 MVER----NVLSWTALICGAAQWGFCEEALVVFEKMR-VAGVRPNELTFTGVLSACAHAG 267
M E+ V+ + L+ A + +EA +F+ M+ P+ TF+ +++ A +G
Sbjct: 376 MKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMKNCETCDPDSWTFSSLITVYACSG 435
Query: 268 LVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEE---AYEIIKTMKVEPNVVVFG 324
V E + + G EP + S++ GK+ ++++ ++ + + + P+ G
Sbjct: 436 RVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVVRTFDQVLELGITPDDRFCG 495
Query: 325 SFLSACKEHKQFEM---------AERVIEQVLRMVKPED--DRGIYR 360
L+ + E+ A+ + QV++M+ E + G+++
Sbjct: 496 CLLNVMTQTPSEEIGKLIGCVEKAKPKLGQVVKMLVEEQNCEEGVFK 542
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/352 (22%), Positives = 158/352 (44%), Gaps = 33/352 (9%)
Query: 1 MHLYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLT------IIQHLHAHIIKLGFAPTHLH 54
+ S+L ++ D F +C H+H L + A+++ G+ P H
Sbjct: 6 LQFLSRLRKSSNLPDPF-------TCNKHIHQLINSNCGILSLKFLAYLVSRGYTP-HRS 57
Query: 55 VANCLLNAYVLLSFLD-ACILFDEMP----NRNTVTWNTMIVGYSRSGDVQRAREVFEEA 109
N +++ L + A + MP + +++N++I G+ R+GD++ A V E
Sbjct: 58 SFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESL 117
Query: 110 PQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGI-----KPDQVTAGAVLSGCAHMG 164
I ++N++ + + + V ++ G+ P+ VT + G
Sbjct: 118 RASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSG 177
Query: 165 SLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELM----VERNVLS 220
L L A KS H + ++ N L++ Y K G L A +++ M + NV++
Sbjct: 178 ELQL-ALKSFHS-MKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVT 235
Query: 221 WTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIE 280
+TALI G + G + A ++ +M V PN L +T ++ G + ++ +
Sbjct: 236 YTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKML 295
Query: 281 DYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMK---VEPNVVVFGSFLSA 329
+ GM + Y ++ + +G+L+EA EI++ M+ + P++V+F + ++A
Sbjct: 296 NQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNA 347
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 149/321 (46%), Gaps = 33/321 (10%)
Query: 15 DSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLLNAYVLLSFLDACI- 73
D+FC L+ HS+ + +P ++ CL++ Y L+ +
Sbjct: 171 DTFCKSGELQLALKSFHSMK----------RDALSP-NVVTFTCLIDGYCKAGDLEVAVS 219
Query: 74 LFDEMP----NRNTVTWNTMIVGYSRSGDVQRAREVF----EEAPQRDSVSLSSMISAYN 125
L+ EM + N VT+ +I G+ + G++QRA E++ E+ + +S+ +++I +
Sbjct: 220 LYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFF 279
Query: 126 NIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWEL 185
G S + + +L +G++ D G ++SG G L + + K+
Sbjct: 280 QRGDSDNAMKFLAK-MLNQGMRLDITAYGVIISGLCGNGKLK--EATEIVEDMEKSDLVP 336
Query: 186 NAELGATLVNMYAKGGVLRNAAMVFELMVER----NVLSWTALICGAAQWGFCEEALVVF 241
+ + T++N Y K G ++ A ++ ++ER +V++ + +I G A+ G EA+V F
Sbjct: 337 DMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYF 396
Query: 242 EKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKS 301
+ N++ +T ++ A G E R F I + G+ P Y S + + K
Sbjct: 397 -----CIEKANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQ 451
Query: 302 GRLEEAYEIIKTMKVEPNVVV 322
G L +A++ +KT V+ +++
Sbjct: 452 GNLVDAFK-LKTRMVQEGLLL 471
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 148/307 (48%), Gaps = 27/307 (8%)
Query: 57 NCLLNAYVLLSFLDACILFD----EMPNRNTVTWNTMIVGYSRSGDVQRAREVF----EE 108
N L N + + LD ++ + + N VT++T I + +SG++Q A + F +
Sbjct: 133 NSLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRD 192
Query: 109 APQRDSVSLSSMISAYNNIGSSKQGLSLF---RRVLLFEGIKPDQVTAGAVLSGCAHMGS 165
A + V+ + +I Y G + +SL+ RRV + + VT A++ G G
Sbjct: 193 ALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNV----VTYTALIDGFCKKGE 248
Query: 166 LGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVER----NVLSW 221
+ + ++ +V++ E N+ + T+++ + + G NA M+ + ++ ++
Sbjct: 249 MQ--RAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAY 306
Query: 222 TALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEG-RRYFKMIE 280
+I G G +EA + E M + + P+ + FT +++A +G ++ Y K+IE
Sbjct: 307 GVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIE 366
Query: 281 DYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSA-CKEHKQFEMA 339
G EP V ++++ + K+G+L EA I+ + N V++ + A CKE E+
Sbjct: 367 -RGFEPDVVALSTMIDGIAKNGQLHEA--IVYFCIEKANDVMYTVLIDALCKEGDFIEV- 422
Query: 340 ERVIEQV 346
ER+ ++
Sbjct: 423 ERLFSKI 429
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 114/251 (45%), Gaps = 20/251 (7%)
Query: 109 APQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMG---- 164
P R S +S++S +G K + + F G +PD ++ +++ G G
Sbjct: 53 TPHRSS--FNSVVSFVCKLGQVKFAEDIVHSMPRF-GCEPDVISYNSLIDGHCRNGDIRS 109
Query: 165 -SLGLLAGKSVHGFIVK-NGWELNAELGATLVNMYAKGGVLRNAAMVFELMVE---RNVL 219
SL L + ++ HGFI K + N +L N ++K +L + +M++ NV+
Sbjct: 110 ASLVLESLRASHGFICKPDIVSFN-----SLFNGFSKMKMLDEVFVYMGVMLKCCSPNVV 164
Query: 220 SWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMI 279
+++ I + G + AL F M+ + PN +TFT ++ AG +E +K +
Sbjct: 165 TYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEM 224
Query: 280 EDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTM---KVEPNVVVFGSFLSACKEHKQF 336
M V Y +L+ K G ++ A E+ M +VEPN +V+ + + +
Sbjct: 225 RRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDS 284
Query: 337 EMAERVIEQVL 347
+ A + + ++L
Sbjct: 285 DNAMKFLAKML 295
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 83/341 (24%), Positives = 156/341 (45%), Gaps = 21/341 (6%)
Query: 38 HLHAHIIKLGFAPTHLHVANCLLNAYVLLSFL-DACILFDEMPNR----NTVTWNTMIVG 92
L ++++G PT L N L+N L + DA +L D M N VT+ ++
Sbjct: 163 ELVDRMVEMGHKPT-LITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKV 221
Query: 93 YSRSGDVQRAREVFEEAPQR----DSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKP 148
+SG A E+ + +R D+V S +I GS +LF + + +G K
Sbjct: 222 MCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEI-KGFKA 280
Query: 149 DQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAM 208
D + ++ G + G G + ++K + + L++ + K G LR A
Sbjct: 281 DIIIYTTLIRGFCYAGRWD--DGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEE 338
Query: 209 VFELMVERNV----LSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACA 264
+ + M++R + +++T+LI G + ++A + + M G PN TF +++
Sbjct: 339 LHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYC 398
Query: 265 HAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTM---KVEPNVV 321
A L+++G F+ + G+ Y +L+ + G+LE A E+ + M +V P++V
Sbjct: 399 KANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIV 458
Query: 322 VFGSFLSACKEHKQFEMAERVIEQVLRMVKPEDDRGIYRLI 362
+ L ++ + E A + E++ + K E D GIY +I
Sbjct: 459 SYKILLDGLCDNGEPEKALEIFEKIEK-SKMELDIGIYNII 498
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 116/243 (47%), Gaps = 18/243 (7%)
Query: 113 DSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLG---LL 169
D+V+ S++I+ G + L L R++ G KP +T A+++G G + LL
Sbjct: 141 DTVTFSTLINGLCLEGRVSEALELVDRMVEM-GHKPTLITLNALVNGLCLNGKVSDAVLL 199
Query: 170 AGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNV----LSWTALI 225
+ +V+ G++ N ++ + K G A + M ER + + ++ +I
Sbjct: 200 IDR-----MVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIII 254
Query: 226 CGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGME 285
G + G + A +F +M + G + + + +T ++ +AG ++G + + + +
Sbjct: 255 DGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKIT 314
Query: 286 PKVHHYASLVYLVGKSGRLEEAYEIIKTM---KVEPNVVVFGSFLSA-CKEHKQFEMAER 341
P V +++L+ K G+L EA E+ K M + P+ V + S + CKE+ Q + A
Sbjct: 315 PDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKEN-QLDKANH 373
Query: 342 VIE 344
+++
Sbjct: 374 MLD 376
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/297 (20%), Positives = 130/297 (43%), Gaps = 13/297 (4%)
Query: 90 IVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPD 149
IV V +E+ P+ + S + S L L +++ L +GI +
Sbjct: 48 IVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMEL-KGIAHN 106
Query: 150 QVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMV 209
T +++ C L L S G I+K G+E + +TL+N G + A +
Sbjct: 107 LYTLSIMINCCCRCRKLSL--AFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALEL 164
Query: 210 FELMVER----NVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAH 265
+ MVE +++ AL+ G G +A+++ ++M G +PNE+T+ VL
Sbjct: 165 VDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCK 224
Query: 266 AGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKV---EPNVVV 322
+G + +E+ ++ Y+ ++ + K G L+ A+ + M++ + ++++
Sbjct: 225 SGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIII 284
Query: 323 FGSFLSA-CKEHKQFEMAERVIEQVLRMVKPEDDRGIYRLIHDLYVMGEKWEEAAKL 378
+ + + C + + A+ + + + R + P D + + D +V K EA +L
Sbjct: 285 YTTLIRGFCYAGRWDDGAKLLRDMIKRKITP--DVVAFSALIDCFVKEGKLREAEEL 339
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 119/260 (45%), Gaps = 28/260 (10%)
Query: 37 QHLHAHIIKLGFAPTHLHVANCLLNAYVLLSFLD-ACILFDEMPNR----NTVTWNTMIV 91
+ LH +I+ G +P + + L++ + + LD A + D M ++ N T+N +I
Sbjct: 337 EELHKEMIQRGISPDTVTYTS-LIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILIN 395
Query: 92 GYSRSGDVQRAREVFEEAPQR----DSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIK 147
GY ++ + E+F + R D+V+ +++I + +G + LF+ ++ ++
Sbjct: 396 GYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQE-MVSRRVR 454
Query: 148 PDQVTAGAVLSGCAHMGSLGLLAGKSVHGF--IVKNGWELNAELGATLVNMYAKGGVLRN 205
PD V+ +L G G K++ F I K+ EL+ + +++ + +
Sbjct: 455 PDIVSYKILLDGLCDNGE----PEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDD 510
Query: 206 AAMVFELM----VERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFT---- 257
A +F + V+ +V ++ +I G + G EA ++F KM G PN T+
Sbjct: 511 AWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIR 570
Query: 258 ---GVLSACAHAGLVEEGRR 274
G A A L+EE +R
Sbjct: 571 AHLGEGDATKSAKLIEEIKR 590
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 87/383 (22%), Positives = 165/383 (43%), Gaps = 68/383 (17%)
Query: 25 SCTSHLHSLTIIQ-----HLHAHIIKLGFAPTHLHVANCLLNAYVLLSFLD-ACILFDEM 78
SC L L++ Q L + ++ G AP + L+N + +D A LF M
Sbjct: 254 SCNKVLKGLSVDQIEVASRLLSLVLDCGPAPNVVTFCT-LINGFCKRGEMDRAFDLFKVM 312
Query: 79 PNR----NTVTWNTMIVGYSRSGDVQRAREVFEEAPQR----DSVSLSSMISAYNNIGSS 130
R + + ++T+I GY ++G + ++F +A + D V SS I Y G
Sbjct: 313 EQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDL 372
Query: 131 KQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELG 190
+++R +L +GI P+ VT ++ G G + G ++G I+K G E +
Sbjct: 373 ATASVVYKR-MLCQGISPNVVTYTILIKGLCQDGRIYEAFG--MYGQILKRGMEPSIVTY 429
Query: 191 ATLVNMYAKGGVLRNAAMVFELMVER---------------------------------- 216
++L++ + K G LR+ ++E M++
Sbjct: 430 SSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLG 489
Query: 217 -----NVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSA-------CA 264
NV+ + +LI G + +EAL VF M + G++P+ TFT V+ C
Sbjct: 490 QSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCK 549
Query: 265 HAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTM---KVEPNVV 321
H G + F +++ + + +++L+ K R+E+A + + K+EP++V
Sbjct: 550 HMK-PTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIV 608
Query: 322 VFGSFLSACKEHKQFEMAERVIE 344
+ + + ++ + AER+ E
Sbjct: 609 TYNTMICGYCSLRRLDEAERIFE 631
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/284 (18%), Positives = 127/284 (44%), Gaps = 22/284 (7%)
Query: 82 NTVTWNTMIVGYSRSGDVQRAR----EVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLF 137
+ V + ++ G S+ G + A ++ ++ + + V +S+I + + + L +F
Sbjct: 460 DVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVF 519
Query: 138 RRVLLFEGIKPDQVTAGAVL-------SGCAHMGSLGLLAGKSVHGFIVKNGWELNAELG 190
R + ++ GIKPD T V+ + C HM G + + +N + +
Sbjct: 520 RLMGIY-GIKPDVATFTTVMRVSIMEDAFCKHMKPT---IGLQLFDLMQRNKISADIAVC 575
Query: 191 ATLVNMYAKGGVLRNAAMVFELMVE----RNVLSWTALICGAAQWGFCEEALVVFEKMRV 246
++++ K + +A+ F ++E +++++ +ICG +EA +FE ++V
Sbjct: 576 NVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKV 635
Query: 247 AGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEE 306
PN +T T ++ ++ R F ++ + G +P Y L+ KS +E
Sbjct: 636 TPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEG 695
Query: 307 AYEIIKTMK---VEPNVVVFGSFLSACKEHKQFEMAERVIEQVL 347
++++ + M+ + P++V + + + + + A + Q +
Sbjct: 696 SFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAI 739
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 116/261 (44%), Gaps = 27/261 (10%)
Query: 95 RSGDVQRAREVFEEAPQRDSV----SLSSMISAYNNIGSSKQGL--SLFRRVLLFEGIKP 148
R G V +A E+F + Q V S+ M+++ IGS + L F + L GI+P
Sbjct: 158 RYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSL--IGSDRVDLIADHFDK-LCRGGIEP 214
Query: 149 DQVTA-GAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVL---- 203
V+A G VL G + H +++ G+ + G N KG +
Sbjct: 215 SGVSAHGFVLDALFCKGEV--TKALDFHRLVMERGFRV----GIVSCNKVLKGLSVDQIE 268
Query: 204 ---RNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVL 260
R ++V + NV+++ LI G + G + A +F+ M G+ P+ + ++ ++
Sbjct: 269 VASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLI 328
Query: 261 SACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTM---KVE 317
AG++ G + F G++ V ++S + + KSG L A + K M +
Sbjct: 329 DGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGIS 388
Query: 318 PNVVVFGSFLSA-CKEHKQFE 337
PNVV + + C++ + +E
Sbjct: 389 PNVVTYTILIKGLCQDGRIYE 409
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 145/320 (45%), Gaps = 58/320 (18%)
Query: 84 VTWNTMIVGYSRSGDVQRAREVF----EEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRR 139
VT+ +I Y++ G + +A EV EE + + + S MI+ + + ++F
Sbjct: 485 VTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFED 544
Query: 140 VLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWEL----NAELGATLVN 195
++ EG+KPD + ++S MG++ +++ VK +L +++
Sbjct: 545 -MVKEGMKPDVILYNNIISAFCGMGNMD----RAIQ--TVKEMQKLRHRPTTRTFMPIIH 597
Query: 196 MYAKGGVLRNAAMVFELMVE----RNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRP 251
YAK G +R + VF++M V ++ LI G + E+A+ + ++M +AGV
Sbjct: 598 GYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSA 657
Query: 252 NELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLE------ 305
NE T+T ++ A G + YF +++ G++ + Y +L+ KSGR++
Sbjct: 658 NEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVT 717
Query: 306 -----------------------------EAYEIIKTMK---VEPNVVVFGSFLSACKEH 333
EA ++I+ MK V+P++ + SF+SAC +
Sbjct: 718 KEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKA 777
Query: 334 KQFEMAERVIEQVLRM-VKP 352
A + IE++ + VKP
Sbjct: 778 GDMNRATQTIEEMEALGVKP 797
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 150/305 (49%), Gaps = 24/305 (7%)
Query: 43 IIKLGFAPTHLHVANCLLNAYVLLSFLDACIL----FDEMPNRNTV-TWNTMIVGYSRSG 97
++K G P + + N +++A+ + +D I ++ +R T T+ +I GY++SG
Sbjct: 545 MVKEGMKPDVI-LYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSG 603
Query: 98 DVQRAREVFEEAPQRDSV----SLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTA 153
D++R+ EVF+ + V + + +I+ ++ + + + L G+ ++ T
Sbjct: 604 DMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTL-AGVSANEHTY 662
Query: 154 GAVLSGCAHMGSLGLLAGKSVHGF--IVKNGWELNAELGATLVNMYAKGGVLRNAAMVFE 211
++ G A +G GK+ F + G +++ L+ K G +++A V +
Sbjct: 663 TKIMQGYASVGD----TGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTK 718
Query: 212 LM----VERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAG 267
M + RN + LI G A+ G EA + ++M+ GV+P+ T+T +SAC+ AG
Sbjct: 719 EMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAG 778
Query: 268 LVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEA---YEIIKTMKVEPNVVVFG 324
+ + + +E G++P + Y +L+ ++ E+A YE +K M ++P+ V+
Sbjct: 779 DMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYH 838
Query: 325 SFLSA 329
L++
Sbjct: 839 CLLTS 843
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/305 (19%), Positives = 129/305 (42%), Gaps = 24/305 (7%)
Query: 75 FDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLS----SMISAYNNIGSS 130
F+++ + + M+ Y R GD+ RARE FE R S S+I AY
Sbjct: 301 FEKISKPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDM 360
Query: 131 KQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMG-----SLGLLAGKSVHGFIVKNGWEL 185
+ LS R+ + EGI+ VT ++ G + G K +H L
Sbjct: 361 DEALSCVRK-MKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHK-------TL 412
Query: 186 NAELGATLVNMYAKGGVLRNAAMVFELMVERNVLS----WTALICGAAQWGFCEEALVVF 241
NA + ++ + + + A + M E + + + ++ G ++ LVVF
Sbjct: 413 NASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVF 472
Query: 242 EKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKS 301
++++ G P +T+ +++ G + + +++++ G++ + Y+ ++ K
Sbjct: 473 KRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKL 532
Query: 302 GRLEEAYEIIKTMKVE---PNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPEDDRGI 358
A+ + + M E P+V+++ + +SA + A + ++++ ++ R
Sbjct: 533 KDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTF 592
Query: 359 YRLIH 363
+IH
Sbjct: 593 MPIIH 597
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 87/353 (24%), Positives = 151/353 (42%), Gaps = 31/353 (8%)
Query: 49 APTHLHVANCLLNAYVLLSFLDACILFDEMPNR-NTVTWNTMIVGYSRSGDVQRAREVFE 107
AP + +CL + D + DE+ R + VT +I +S V A EVFE
Sbjct: 294 APPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFE 353
Query: 108 EAPQR----------DSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVL 157
+ + DS+ +++I +G K+ L R+ L E P+ VT ++
Sbjct: 354 KMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLI 413
Query: 158 SGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLR----NAAMVFELM 213
G G L K V + ++ + N T+V GG+ R N A+VF +
Sbjct: 414 DGYCRAGKLE--TAKEVVSRMKEDEIKPNVVTVNTIV-----GGMCRHHGLNMAVVFFMD 466
Query: 214 VER-----NVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGL 268
+E+ NV+++ LI E+A+ +EKM AG P+ + ++S
Sbjct: 467 MEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRR 526
Query: 269 VEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVE---PNVVVFGS 325
+ R + +++ G + Y L+ L E+ YE++ M+ E P+ + + +
Sbjct: 527 DHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNT 586
Query: 326 FLSACKEHKQFEMAERVIEQVLRMVKPEDDRGIYRLIHDLYVMGEKWEEAAKL 378
+S +HK FE ER++EQ +R + Y + D Y + +EA KL
Sbjct: 587 LISFFGKHKDFESVERMMEQ-MREDGLDPTVTTYGAVIDAYCSVGELDEALKL 638
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 135/287 (47%), Gaps = 22/287 (7%)
Query: 82 NTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVL 141
N VT+N +I GY R+G ++ A+EV + D + ++++ +G + L V+
Sbjct: 405 NAVTYNCLIDGYCRAGKLETAKEVVSRM-KEDEIK-PNVVTVNTIVGGMCRHHGLNMAVV 462
Query: 142 LF-----EGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGF--IVKNGWELNAELGATLV 194
F EG+K + VT ++ C + ++ K+++ + +++ G +A++ L+
Sbjct: 463 FFMDMEKEGVKGNVVTYMTLIHACCSVSNVE----KAMYWYEKMLEAGCSPDAKIYYALI 518
Query: 195 NMYAKGGVLRNAAMVFELMVE----RNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVR 250
+ + +A V E + E ++L++ LI E+ + M G +
Sbjct: 519 SGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKK 578
Query: 251 PNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEI 310
P+ +T+ ++S E R + + + G++P V Y +++ G L+EA ++
Sbjct: 579 PDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKL 638
Query: 311 IKTM----KVEPNVVVFGSFLSACKEHKQFEMAERVIEQV-LRMVKP 352
K M KV PN V++ ++A + F A + E++ ++MV+P
Sbjct: 639 FKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRP 685
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 87/353 (24%), Positives = 151/353 (42%), Gaps = 31/353 (8%)
Query: 49 APTHLHVANCLLNAYVLLSFLDACILFDEMPNR-NTVTWNTMIVGYSRSGDVQRAREVFE 107
AP + +CL + D + DE+ R + VT +I +S V A EVFE
Sbjct: 294 APPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFE 353
Query: 108 EAPQR----------DSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVL 157
+ + DS+ +++I +G K+ L R+ L E P+ VT ++
Sbjct: 354 QMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLI 413
Query: 158 SGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLR----NAAMVFELM 213
G G L K V + ++ + N T+V GG+ R N A+VF +
Sbjct: 414 DGYCRAGKLE--TAKEVVSRMKEDEIKPNVVTVNTIV-----GGMCRHHGLNMAVVFFMD 466
Query: 214 VER-----NVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGL 268
+E+ NV+++ LI E+A+ +EKM AG P+ + ++S
Sbjct: 467 MEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRR 526
Query: 269 VEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVE---PNVVVFGS 325
+ R + +++ G + Y L+ L E+ YE++ M+ E P+ + + +
Sbjct: 527 DHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNT 586
Query: 326 FLSACKEHKQFEMAERVIEQVLRMVKPEDDRGIYRLIHDLYVMGEKWEEAAKL 378
+S +HK FE ER++EQ +R + Y + D Y + +EA KL
Sbjct: 587 LISFFGKHKDFESVERMMEQ-MREDGLDPTVTTYGAVIDAYCSVGELDEALKL 638
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 135/287 (47%), Gaps = 22/287 (7%)
Query: 82 NTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVL 141
N VT+N +I GY R+G ++ A+EV + D + ++++ +G + L V+
Sbjct: 405 NAVTYNCLIDGYCRAGKLETAKEVVSRMKE-DEIK-PNVVTVNTIVGGMCRHHGLNMAVV 462
Query: 142 LF-----EGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGF--IVKNGWELNAELGATLV 194
F EG+K + VT ++ C + ++ K+++ + +++ G +A++ L+
Sbjct: 463 FFMDMEKEGVKGNVVTYMTLIHACCSVSNVE----KAMYWYEKMLEAGCSPDAKIYYALI 518
Query: 195 NMYAKGGVLRNAAMVFELMVE----RNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVR 250
+ + +A V E + E ++L++ LI E+ + M G +
Sbjct: 519 SGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKK 578
Query: 251 PNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEI 310
P+ +T+ ++S E R + + + G++P V Y +++ G L+EA ++
Sbjct: 579 PDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKL 638
Query: 311 IKTM----KVEPNVVVFGSFLSACKEHKQFEMAERVIEQV-LRMVKP 352
K M KV PN V++ ++A + F A + E++ ++MV+P
Sbjct: 639 FKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRP 685
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 87/353 (24%), Positives = 151/353 (42%), Gaps = 31/353 (8%)
Query: 49 APTHLHVANCLLNAYVLLSFLDACILFDEMPNR-NTVTWNTMIVGYSRSGDVQRAREVFE 107
AP + +CL + D + DE+ R + VT +I +S V A EVFE
Sbjct: 294 APPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFE 353
Query: 108 EAPQR----------DSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVL 157
+ + DS+ +++I +G K+ L R+ L E P+ VT ++
Sbjct: 354 QMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLI 413
Query: 158 SGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLR----NAAMVFELM 213
G G L K V + ++ + N T+V GG+ R N A+VF +
Sbjct: 414 DGYCRAGKLE--TAKEVVSRMKEDEIKPNVVTVNTIV-----GGMCRHHGLNMAVVFFMD 466
Query: 214 VER-----NVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGL 268
+E+ NV+++ LI E+A+ +EKM AG P+ + ++S
Sbjct: 467 MEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRR 526
Query: 269 VEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVE---PNVVVFGS 325
+ R + +++ G + Y L+ L E+ YE++ M+ E P+ + + +
Sbjct: 527 DHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNT 586
Query: 326 FLSACKEHKQFEMAERVIEQVLRMVKPEDDRGIYRLIHDLYVMGEKWEEAAKL 378
+S +HK FE ER++EQ +R + Y + D Y + +EA KL
Sbjct: 587 LISFFGKHKDFESVERMMEQ-MREDGLDPTVTTYGAVIDAYCSVGELDEALKL 638
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 135/287 (47%), Gaps = 22/287 (7%)
Query: 82 NTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVL 141
N VT+N +I GY R+G ++ A+EV + D + ++++ +G + L V+
Sbjct: 405 NAVTYNCLIDGYCRAGKLETAKEVVSRM-KEDEIK-PNVVTVNTIVGGMCRHHGLNMAVV 462
Query: 142 LF-----EGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGF--IVKNGWELNAELGATLV 194
F EG+K + VT ++ C + ++ K+++ + +++ G +A++ L+
Sbjct: 463 FFMDMEKEGVKGNVVTYMTLIHACCSVSNVE----KAMYWYEKMLEAGCSPDAKIYYALI 518
Query: 195 NMYAKGGVLRNAAMVFELMVE----RNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVR 250
+ + +A V E + E ++L++ LI E+ + M G +
Sbjct: 519 SGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKK 578
Query: 251 PNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEI 310
P+ +T+ ++S E R + + + G++P V Y +++ G L+EA ++
Sbjct: 579 PDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKL 638
Query: 311 IKTM----KVEPNVVVFGSFLSACKEHKQFEMAERVIEQV-LRMVKP 352
K M KV PN V++ ++A + F A + E++ ++MV+P
Sbjct: 639 FKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRP 685
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 134/288 (46%), Gaps = 18/288 (6%)
Query: 74 LFDEMPNR----NTVTWNTMIVGYSRSGDVQRAREVF----EEAPQRDSVSLSSMISAYN 125
+F +M N N T+ +I G +R+G V +A + + + D V +++ISA
Sbjct: 524 VFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISACG 583
Query: 126 NIGSSKQGLSLFRRVLL-FEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWE 184
G+ + + + I PD ++ GA++ C + G + K V+ I K G
Sbjct: 584 QSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVE--RAKEVYQMIHKYGIR 641
Query: 185 LNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLS----WTALICGAAQWGFCEEALVV 240
E+ VN +K G A +++ M E++V ++ALI A +EA +
Sbjct: 642 GTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGI 701
Query: 241 FEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGK 300
+ + G+R ++++ ++ AC +A ++ ++ I+ + P + +L+ + +
Sbjct: 702 LQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALITALCE 761
Query: 301 SGRLEEAYEI---IKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQ 345
+L +A E IKT+ ++PN + + + A + FE++ +++ Q
Sbjct: 762 GNQLPKAMEYLDEIKTLGLKPNTITYSMLMLASERKDDFEVSFKLLSQ 809
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 123/286 (43%), Gaps = 21/286 (7%)
Query: 70 DACILFDEMPNRNTVTWNTMI-VGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYN--- 125
D L +++ R+ + + + + ++ QRA +EA + + L+ +S +N
Sbjct: 418 DCISLLEDLDQRDLLDMDKIYHASFFKACKKQRA---VKEAFRFTKLILNPTMSTFNMLM 474
Query: 126 NIGSSKQGLSLFRRVLLF---EGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNG 182
++ +S Q + R VL G+ D ++S CA G + + V + +G
Sbjct: 475 SVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDAMF--EVFHQMSNSG 532
Query: 183 WELNAELGATLVNMYAKGGVLRNAAMVFELMVERNV----LSWTALICGAAQWGFCEEAL 238
E N L++ A+ G + A + ++ +NV + + ALI Q G + A
Sbjct: 533 VEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISACGQSGAVDRAF 592
Query: 239 VVFEKMRVAG--VRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVY 296
V +M+ + P+ ++ ++ AC +AG VE + ++MI YG+ Y V
Sbjct: 593 DVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTPEVYTIAVN 652
Query: 297 LVGKSGRLEEAYEIIKTMK---VEPNVVVFGSFLSACKEHKQFEMA 339
KSG + A I K MK V P+ V F + + K + A
Sbjct: 653 SCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEA 698
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 74/151 (49%), Gaps = 8/151 (5%)
Query: 201 GVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVL 260
GVLR +V E + + +T LI A+ G + VF +M +GV N TF ++
Sbjct: 488 GVLR---LVQESGMTADCKLYTTLISSCAKSGKVDAMFEVFHQMSNSGVEANLHTFGALI 544
Query: 261 SACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVE--- 317
CA AG V + + ++ ++P + +L+ G+SG ++ A++++ MK E
Sbjct: 545 DGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHP 604
Query: 318 --PNVVVFGSFLSACKEHKQFEMAERVIEQV 346
P+ + G+ + AC Q E A+ V + +
Sbjct: 605 IDPDHISIGALMKACCNAGQVERAKEVYQMI 635
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 82/167 (49%), Gaps = 3/167 (1%)
Query: 191 ATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVR 250
A+ K ++ A +L++ + ++ L+ A E A V ++ +G+
Sbjct: 440 ASFFKACKKQRAVKEAFRFTKLILNPTMSTFNMLMSVCASSQDIEGARGVLRLVQESGMT 499
Query: 251 PNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEA--- 307
+ +T ++S+CA +G V+ F + + G+E +H + +L+ ++G++ +A
Sbjct: 500 ADCKLYTTLISSCAKSGKVDAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGA 559
Query: 308 YEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPED 354
Y I+++ V+P+ VVF + +SAC + + A V+ ++ P D
Sbjct: 560 YGILRSKNVKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHPID 606
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 129/292 (44%), Gaps = 52/292 (17%)
Query: 37 QHLHAHIIKLGFAPTHLHVANCLLNAYVLLSFLD-ACILFDEMPNR----NTVTWNTMIV 91
+ L+ +IK P + + L+N + + LD A +F+ M ++ N VT+NT+I
Sbjct: 345 EKLYDEMIKRSIDP-DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIK 403
Query: 92 GYSRSGDVQRAREVFEEAPQR----DSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIK 147
G+ ++ V+ E+F E QR ++V+ +++I G +F++ ++ +G+
Sbjct: 404 GFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKK-MVSDGVP 462
Query: 148 PDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAA 207
PD +T +L G K G L A
Sbjct: 463 PDIITYSILLDG-------------------------------------LCKYGKLEKAL 485
Query: 208 MVFELM----VERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSAC 263
+VFE + +E ++ ++ +I G + G E+ +F + + GV+PN + +T ++S
Sbjct: 486 VVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGF 545
Query: 264 AHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMK 315
GL EE F+ +++ G P Y +L+ + G + E+IK M+
Sbjct: 546 CRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMR 597
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 136/308 (44%), Gaps = 49/308 (15%)
Query: 70 DACILFDEMPNR----NTVTWNTMI---VGYSRSGDVQRA-REVFEEAPQRDSVSLSSMI 121
DA LF EM N+ N VT+N++I Y R D R ++ E + V+ S++I
Sbjct: 273 DALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALI 332
Query: 122 SAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSG-CAH------MGSLGLLAGKS- 173
A+ G + L+ ++ I PD T ++++G C H L+ K
Sbjct: 333 DAFVKEGKLVEAEKLYDE-MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDC 391
Query: 174 ----------VHGFI----VKNGWELNAELGA-----------TLVNMYAKGGVLRNAAM 208
+ GF V+ G EL E+ TL+ + G A
Sbjct: 392 FPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQK 451
Query: 209 VFELMVER----NVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACA 264
+F+ MV ++++++ L+ G ++G E+ALVVFE ++ + + P+ T+ ++
Sbjct: 452 IFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMC 511
Query: 265 HAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVE---PNVV 321
AG VE+G F + G++P V Y +++ + G EEA + + MK + PN
Sbjct: 512 KAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSG 571
Query: 322 VFGSFLSA 329
+ + + A
Sbjct: 572 TYNTLIRA 579
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/333 (22%), Positives = 145/333 (43%), Gaps = 25/333 (7%)
Query: 61 NAYVLLSFLDACILFDEM----PNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVS 116
N + L DA LF EM P + V +N ++ ++ + + V + ++
Sbjct: 54 NVLLDLKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAK---MNKFDLVISLGERMQNLR 110
Query: 117 LSSMISAYN---NIGSSKQGLSLFRRVL---LFEGIKPDQVTAGAVLSGCAHMGSLGLLA 170
+S + +YN N + L L VL + G +PD VT ++L+G H +
Sbjct: 111 ISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAV 170
Query: 171 GKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVER----NVLSWTALIC 226
F+++ ++ N TL++ A + + MV R ++ ++ ++
Sbjct: 171 ALVDQMFVME--YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVN 228
Query: 227 GAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEP 286
G + G + AL + +KM + + + +T ++ A + V + F +++ G+ P
Sbjct: 229 GLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRP 288
Query: 287 KVHHYASLVYLVGKSGRLEEAYEIIKTM---KVEPNVVVFGSFLSA-CKEHKQFEMAERV 342
V Y SL+ + GR +A ++ M K+ PNVV F + + A KE K E +
Sbjct: 289 NVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLY 348
Query: 343 IEQVLRMVKPEDDRGIYRLIHDLYVMGEKWEEA 375
E + R + P D Y + + + M ++ +EA
Sbjct: 349 DEMIKRSIDP--DIFTYSSLINGFCMHDRLDEA 379
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/270 (19%), Positives = 116/270 (42%), Gaps = 41/270 (15%)
Query: 82 NTVTWNTMIVGYSRSGDVQRA----REVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLF 137
+ VT ++++ GY + A ++F Q ++V+ +++I + + ++L
Sbjct: 149 DIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALI 208
Query: 138 RRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMY 197
R ++ G +PD T G V++G G + +L +L+
Sbjct: 209 DR-MVARGCQPDLFTYGTVVNGLCKRGDI---------------------DLALSLLKKM 246
Query: 198 AKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFT 257
KG + E +V+ +T +I + +AL +F +M G+RPN +T+
Sbjct: 247 EKGKI------------EADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYN 294
Query: 258 GVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTM--- 314
++ + G + R + + + P V +++L+ K G+L EA ++ M
Sbjct: 295 SLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 354
Query: 315 KVEPNVVVFGSFLSACKEHKQFEMAERVIE 344
++P++ + S ++ H + + A+ + E
Sbjct: 355 SIDPDIFTYSSLINGFCMHDRLDEAKHMFE 384
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 127/276 (46%), Gaps = 14/276 (5%)
Query: 85 TWNTMIVGYSRSGDVQRAREVFEEAPQR----DSVSLSSMISAYNNIGSSKQGLSLFRRV 140
T+N +I G + ++ A++VF + D + + ++ AY G + L++ +
Sbjct: 787 TYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEM 846
Query: 141 LLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKG 200
E + + +T V+SG G++ A + + + A L++ +K
Sbjct: 847 STHE-CEANTITHNIVISGLVKAGNVDD-ALDLYYDLMSDRDFSPTACTYGPLIDGLSKS 904
Query: 201 GVLRNAAMVFELMVE----RNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTF 256
G L A +FE M++ N + LI G + G + A +F++M GVRP+ T+
Sbjct: 905 GRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTY 964
Query: 257 TGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMK- 315
+ ++ G V+EG YFK +++ G+ P V Y ++ +GKS RLEEA + MK
Sbjct: 965 SVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKT 1024
Query: 316 ---VEPNVVVFGSFLSACKEHKQFEMAERVIEQVLR 348
+ P++ + S + E A ++ ++ R
Sbjct: 1025 SRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQR 1060
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 121/258 (46%), Gaps = 14/258 (5%)
Query: 82 NTVTWNTMIVGYSRSGDVQRAREVFEEAP----QRDSVSLSSMISAYNNIGSSKQGLSLF 137
+ T+N ++ Y +SG + E+++E + ++++ + +IS G+ L L+
Sbjct: 819 DVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLY 878
Query: 138 RRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMY 197
++ P T G ++ G + G L K + ++ G N + L+N +
Sbjct: 879 YDLMSDRDFSPTACTYGPLIDGLSKSGR--LYEAKQLFEGMLDYGCRPNCAIYNILINGF 936
Query: 198 AKGGVLRNAAMVFELMVERNVL----SWTALICGAAQWGFCEEALVVFEKMRVAGVRPNE 253
K G A +F+ MV+ V +++ L+ G +E L F++++ +G+ P+
Sbjct: 937 GKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDV 996
Query: 254 LTFTGVLSACAHAGLVEEGRRYF-KMIEDYGMEPKVHHYASLVYLVGKSGRLEEA---YE 309
+ + +++ + +EE F +M G+ P ++ Y SL+ +G +G +EEA Y
Sbjct: 997 VCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYN 1056
Query: 310 IIKTMKVEPNVVVFGSFL 327
I+ +EPNV F + +
Sbjct: 1057 EIQRAGLEPNVFTFNALI 1074
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 135/297 (45%), Gaps = 19/297 (6%)
Query: 33 LTIIQHLHAHIIKLGFAPTHLHVANCLLNAYVLLSFLDACI-LFDEMPNR----NTVTWN 87
+ I Q + + G P + N LL+AY +D L+ EM NT+T N
Sbjct: 801 IEIAQDVFLQVKSTGCIP-DVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHN 859
Query: 88 TMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGI- 146
+I G ++G+V A +++ + S ++ G SK G L+ LFEG+
Sbjct: 860 IVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSG-RLYEAKQLFEGML 918
Query: 147 ----KPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGV 202
+P+ +++G G A ++ +VK G + + + LV+ G
Sbjct: 919 DYGCRPNCAIYNILINGFGKAGEAD--AACALFKRMVKEGVRPDLKTYSVLVDCLCMVGR 976
Query: 203 LRNAAMVFELMVER----NVLSWTALICGAAQWGFCEEALVVFEKMRVA-GVRPNELTFT 257
+ F+ + E +V+ + +I G + EEALV+F +M+ + G+ P+ T+
Sbjct: 977 VDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYN 1036
Query: 258 GVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTM 314
++ AG+VEE + + I+ G+EP V + +L+ SG+ E AY + +TM
Sbjct: 1037 SLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTM 1093
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 143/317 (45%), Gaps = 21/317 (6%)
Query: 47 GFAPTHLHVANCLLNAYVLLSFLDACI-LFDEMPN----RNTVTWNTMIVGYSRSGDVQR 101
G P +LH N L+ + + LD + LF M + T+ I Y +SGD
Sbjct: 393 GILP-NLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVS 451
Query: 102 AREVFEEAPQR----DSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVL 157
A E FE+ + + V+ ++ + + G ++ +F L G+ PD VT ++
Sbjct: 452 ALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYG-LKDIGLVPDSVTYNMMM 510
Query: 158 SGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVF----ELM 213
+ +G + + +++NG E + + +L+N K + A +F E+
Sbjct: 511 KCYSKVGEID--EAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMK 568
Query: 214 VERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSA-CAHAGLVEEG 272
++ V+++ L+ G + G +EA+ +FE M G PN +TF + C + +
Sbjct: 569 LKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLAL 628
Query: 273 RRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMK--VEPNVVVFGSFLSAC 330
+ FKM+ D G P V Y ++++ + K+G+++EA MK V P+ V + L
Sbjct: 629 KMLFKMM-DMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGV 687
Query: 331 KEHKQFEMAERVIEQVL 347
+ E A ++I L
Sbjct: 688 VKASLIEDAYKIITNFL 704
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 96/199 (48%), Gaps = 16/199 (8%)
Query: 195 NMYAKGGVLRNAAMVFELMVE----RNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVR 250
++ KGG L+ A M E N S+ LI + FC EA+ V+ +M + G R
Sbjct: 162 SLSVKGG-LKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFR 220
Query: 251 PNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEI 310
P+ T++ ++ ++ K +E G++P V+ + + ++G++G++ EAYEI
Sbjct: 221 PSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEI 280
Query: 311 IKTMKVE---PNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPEDDRGIYRLI----- 362
+K M E P+VV + + A ++ + A+ V E+ ++ + + DR Y +
Sbjct: 281 LKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEK-MKTGRHKPDRVTYITLLDRFS 339
Query: 363 --HDLYVMGEKWEEAAKLG 379
DL + + W E K G
Sbjct: 340 DNRDLDSVKQFWSEMEKDG 358
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 129/306 (42%), Gaps = 26/306 (8%)
Query: 62 AYVLLSFLDACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEE------APQRDS- 114
AY +L +D DE + VT+ +I + + A+EVFE+ P R +
Sbjct: 277 AYEILKRMD-----DEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTY 331
Query: 115 VSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSV 174
++L S ++ S KQ S + +G PD VT ++ G+ G
Sbjct: 332 ITLLDRFSDNRDLDSVKQFWSEMEK----DGHVPDVVTFTILVDALCKAGNFG--EAFDT 385
Query: 175 HGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVF----ELMVERNVLSWTALICGAAQ 230
+ G N TL+ + L +A +F L V+ ++ I +
Sbjct: 386 LDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGK 445
Query: 231 WGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHH 290
G AL FEKM+ G+ PN + L + A AG E ++ F ++D G+ P
Sbjct: 446 SGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVT 505
Query: 291 YASLVYLVGKSGRLEEAYEIIKTMK---VEPNVVVFGSFLSACKEHKQFEMAERVIEQVL 347
Y ++ K G ++EA +++ M EP+V+V S ++ + + + A ++ ++
Sbjct: 506 YNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMK 565
Query: 348 RM-VKP 352
M +KP
Sbjct: 566 EMKLKP 571
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 120/259 (46%), Gaps = 22/259 (8%)
Query: 51 THLHVANCLLNAYVLLSFLDACILFDEMPNRN----TVTWNTMIVGYSRSGDVQRAREVF 106
TH V + L+ A + LD + +D M +R+ T+ +I G S+SG + A+++F
Sbjct: 857 THNIVISGLVKAGNVDDALD--LYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLF 914
Query: 107 E---EAPQRDSVSLSS-MISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAH 162
E + R + ++ + +I+ + G + +LF+R ++ EG++PD T ++
Sbjct: 915 EGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKR-MVKEGVRPDLKTYSVLVDCLCM 973
Query: 163 MGSLGLLAGKSVHGF--IVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELM-----VE 215
+G + + +H F + ++G + ++N K L A ++F M +
Sbjct: 974 VGRVD----EGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGIT 1029
Query: 216 RNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRY 275
++ ++ +LI G EEA ++ +++ AG+ PN TF ++ + +G E
Sbjct: 1030 PDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAV 1089
Query: 276 FKMIEDYGMEPKVHHYASL 294
++ + G P Y L
Sbjct: 1090 YQTMVTGGFSPNTGTYEQL 1108
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/320 (19%), Positives = 144/320 (45%), Gaps = 57/320 (17%)
Query: 79 PNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQR----DSVSLSSMISAY---NNIGSSK 131
P+R VT+ T++ +S + D+ ++ + E + D V+ + ++ A N G +
Sbjct: 326 PDR--VTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAF 383
Query: 132 QGLSLFRRVLLFEGIKPDQVTAGAVLSGC-------------AHMGSLGLLAGKSVHGFI 178
L + R +GI P+ T ++ G +M SLG+ + + +I
Sbjct: 384 DTLDVMRD----QGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGV--KPTAYTYI 437
Query: 179 V------KNGWELNA--------------ELGATLVNMY--AKGGVLRNAAMVF----EL 212
V K+G ++A + A ++Y AK G R A +F ++
Sbjct: 438 VFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDI 497
Query: 213 MVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEG 272
+ + +++ ++ ++ G +EA+ + +M G P+ + +++ A V+E
Sbjct: 498 GLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEA 557
Query: 273 RRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTM---KVEPNVVVFGSFLSA 329
+ F +++ ++P V Y +L+ +GK+G+++EA E+ + M PN + F +
Sbjct: 558 WKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDC 617
Query: 330 CKEHKQFEMAERVIEQVLRM 349
++ + +A +++ +++ M
Sbjct: 618 LCKNDEVTLALKMLFKMMDM 637
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 133/305 (43%), Gaps = 47/305 (15%)
Query: 47 GFAPTHLHVANCLLNAYVLLSFLDAC-ILFDEMPN----RNTVTWNTMIVGYSRSGDVQR 101
G PT L+ N L+N V F+D+ +F+ M + + VT+NTMI GY ++G Q+
Sbjct: 217 GIEPT-LYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQK 275
Query: 102 AREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCA 161
A E + R G + D++T ++ C
Sbjct: 276 AMEKLRDMETR--------------------------------GHEADKITYMTMIQACY 303
Query: 162 HMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVER----N 217
G +++ + + G ++ + ++ K G L VFE M+ + N
Sbjct: 304 ADSDFGSCV--ALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPN 361
Query: 218 VLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFK 277
V +T LI G A+ G E+A+ + +M G +P+ +T++ V++ G VEE YF
Sbjct: 362 VAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFH 421
Query: 278 MIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMK---VEPNVVVFGSFLSACKEHK 334
G+ Y+SL+ +GK+GR++EA + + M + + + + A +H+
Sbjct: 422 TCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHR 481
Query: 335 QFEMA 339
+ + A
Sbjct: 482 KVDEA 486
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 135/289 (46%), Gaps = 22/289 (7%)
Query: 73 ILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRD----SVSLSSMISAYNNIG 128
++ E + + T+N++I G + G+V+ A EV ++ RD +V+ +++IS
Sbjct: 320 VMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKEN 379
Query: 129 SSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCA----HMGSLGLLAGKSVHGFIVKNGWE 184
++ L RVL +GI PD T +++ G H ++ L + G E
Sbjct: 380 QVEEATEL-ARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEE------MRSKGCE 432
Query: 185 LNAELGATLVNMYAKGGVLRNAAMVFELM----VERNVLSWTALICGAAQWGFCEEALVV 240
+ L++ G L A + + M R+V+++ LI G + EA +
Sbjct: 433 PDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEI 492
Query: 241 FEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGK 300
F++M V GV N +T+ ++ + VE+ + + G +P + Y SL+ +
Sbjct: 493 FDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCR 552
Query: 301 SGRLEEAYEIIKTMK---VEPNVVVFGSFLSACKEHKQFEMAERVIEQV 346
G +++A +I++ M EP++V +G+ +S + + E+A +++ +
Sbjct: 553 GGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSI 601
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 123/261 (47%), Gaps = 21/261 (8%)
Query: 69 LDACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQR----DSVSLSSMISAY 124
LD I D PN TVT+NT+I + V+ A E+ + D + +S+I
Sbjct: 353 LDQMITRDCSPN--TVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGL 410
Query: 125 NNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMG----SLGLLAGKSVHGFIVK 180
+ + + LF + +G +PD+ T ++ G +L +L + G +
Sbjct: 411 CLTRNHRVAMELFEE-MRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSG-CAR 468
Query: 181 NGWELNAELGATLVNMYAKGGVLRNAAMVFELM----VERNVLSWTALICGAAQWGFCEE 236
+ N TL++ + K R A +F+ M V RN +++ LI G + E+
Sbjct: 469 SVITYN-----TLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVED 523
Query: 237 ALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVY 296
A + ++M + G +P++ T+ +L+ G +++ + + G EP + Y +L+
Sbjct: 524 AAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLIS 583
Query: 297 LVGKSGRLEEAYEIIKTMKVE 317
+ K+GR+E A +++++++++
Sbjct: 584 GLCKAGRVEVASKLLRSIQMK 604
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 77/371 (20%), Positives = 154/371 (41%), Gaps = 69/371 (18%)
Query: 31 HSLTIIQHLHAHIIKLGFAPTHLHVANCLLNAYVLLSFLDACIL-FDEMPNRNTV----T 85
+SL +++ HA + G P + N L+ A L IL ++MP+ V T
Sbjct: 168 NSLKLVEISHAKMSVWGIKP-DVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKT 226
Query: 86 WNTMIVGYSRSGDVQRAREVFEEAPQR----DSVSLSSMISAYNNIGSSKQGLSLFRRVL 141
+ T++ GY GD+ A + E+ + +VS++ ++ + G + L+ + +
Sbjct: 227 FTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMS 286
Query: 142 LFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGG 201
+G PDQ T TLVN K G
Sbjct: 287 NQDGFFPDQYTFN-------------------------------------TLVNGLCKAG 309
Query: 202 VLRNAAMVFELMVER----NVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFT 257
+++A + ++M++ +V ++ ++I G + G +EA+ V ++M PN +T+
Sbjct: 310 HVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYN 369
Query: 258 GVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLV--YLVGKSGRLE-EAYEIIKTM 314
++S VEE +++ G+ P V + SL+ + ++ R+ E +E +++
Sbjct: 370 TLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSK 429
Query: 315 KVEPNVVVFGSFL-SACKEHKQFEMAERVIEQVLRMVKPEDDRG------IYRLIHDLYV 367
EP+ + + S C + K +++ L M+K + G Y + D +
Sbjct: 430 GCEPDEFTYNMLIDSLCSKGK--------LDEALNMLKQMELSGCARSVITYNTLIDGFC 481
Query: 368 MGEKWEEAAKL 378
K EA ++
Sbjct: 482 KANKTREAEEI 492
>AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14510482-14511891 FORWARD
LENGTH=469
Length = 469
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 91/184 (49%), Gaps = 5/184 (2%)
Query: 167 GLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALIC 226
L + VH I L+A T++ MY+ +A VF M +RN +W +I
Sbjct: 127 ALEEARVVHDCITP----LDARSYHTVIEMYSGCRSTDDALNVFNEMPKRNSETWGTMIR 182
Query: 227 GAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFK-MIEDYGME 285
A+ G E A+ +F + G +P++ F V AC G + EG +F+ M DYGM
Sbjct: 183 CLAKNGEGERAIDMFTRFIEEGNKPDKEIFKAVFFACVSIGDINEGLLHFESMYRDYGMV 242
Query: 286 PKVHHYASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQ 345
+ Y +++ ++ G L+EA + ++ M VEP+V ++ + ++ C E+ +R E
Sbjct: 243 LSMEDYVNVIEMLAACGHLDEALDFVERMTVEPSVEMWETLMNLCWVQGYLELGDRFAEL 302
Query: 346 VLRM 349
+ ++
Sbjct: 303 IKKL 306
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 105/224 (46%), Gaps = 13/224 (5%)
Query: 70 DACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGS 129
+A ++ D + + +++T+I YS A VF E P+R+S + +MI G
Sbjct: 130 EARVVHDCITPLDARSYHTVIEMYSGCRSTDDALNVFNEMPKRNSETWGTMIRCLAKNGE 189
Query: 130 SKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSL--GLLAGKSVHGFIVKNGWELNA 187
++ + +F R + EG KPD+ AV C +G + GLL +S++ G L+
Sbjct: 190 GERAIDMFTR-FIEEGNKPDKEIFKAVFFACVSIGDINEGLLHFESMYR---DYGMVLSM 245
Query: 188 ELGATLVNMYAKGGVLRNAAMVFELM-VERNVLSWTALICGAAQWGFCEEALVVFEKM-R 245
E ++ M A G L A E M VE +V W L+ G+ E E + +
Sbjct: 246 EDYVNVIEMLAACGHLDEALDFVERMTVEPSVEMWETLMNLCWVQGYLELGDRFAELIKK 305
Query: 246 VAGVRPNELTFTGVLSACAHAGLVEEGR--RYFKMIEDYGMEPK 287
+ R ++ + G+++A A +E+ + RY +MI D +PK
Sbjct: 306 LDASRMSKESNAGLVAAKASDSAMEKLKELRYCQMIRD---DPK 346
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 112/287 (39%), Gaps = 27/287 (9%)
Query: 70 DACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVF----EEAPQRDSVSLSSMISAYN 125
DA +F+EMP RN+ TW TMI +++G+ +RA ++F EE + D ++ A
Sbjct: 161 DALNVFNEMPKRNSETWGTMIRCLAKNGEGERAIDMFTRFIEEGNKPDKEIFKAVFFACV 220
Query: 126 NIGSSKQGLSLFRRVLLFEGI---KPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNG 182
+IG +GL F + G+ D V +L+ C H+ F+ +
Sbjct: 221 SIGDINEGLLHFESMYRDYGMVLSMEDYVNVIEMLAACGHLD--------EALDFVERMT 272
Query: 183 WELNAELGATLVNMYAKGGVL----RNAAMVFELMVERNVLSWTALICGAAQWGFCEEAL 238
E + E+ TL+N+ G L R A ++ +L R A + A E L
Sbjct: 273 VEPSVEMWETLMNLCWVQGYLELGDRFAELIKKLDASRMSKESNAGLVAAKASDSAMEKL 332
Query: 239 VVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEP-------KVHHY 291
++ P + +H G V R + D G P V
Sbjct: 333 KELRYCQMIRDDPKKRMHEFRAGDTSHLGTVSAFRSLKVQMLDIGFVPATRVCFVTVEEE 392
Query: 292 ASLVYLVGKSGRLEEAYEIIKTMKVEPNVVVFGSFLSACKEHKQFEM 338
L+ +S +L A+ II + P + V + + H F+M
Sbjct: 393 EKEEQLLFRSNKLAFAHAIINSEARRP-LTVLQNMRTCIDGHNTFKM 438
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 81/341 (23%), Positives = 154/341 (45%), Gaps = 21/341 (6%)
Query: 38 HLHAHIIKLGFAPTHLHVANCLLNAYVLL-SFLDACILFDEMP----NRNTVTWNTMIVG 92
L ++++G P + + N L+N L +A +L D+M N VT+ ++
Sbjct: 179 ELVDRMVEMGHKPDLITI-NTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNV 237
Query: 93 YSRSGDVQRAREVFEEAPQR----DSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKP 148
+SG A E+ + +R D+V S +I GS +LF + + +GI
Sbjct: 238 MCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEM-KGITT 296
Query: 149 DQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAM 208
+ +T ++ G + G G + ++K N + L++ + K G LR A
Sbjct: 297 NIITYNILIGGFCNAGRWD--DGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEE 354
Query: 209 VFELMVERNV----LSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACA 264
+ + M+ R + +++T+LI G + ++A + + M G PN TF +++
Sbjct: 355 LHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYC 414
Query: 265 HAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTM---KVEPNVV 321
A +++G F+ + G+ Y +L+ + G+L A E+ + M KV PN+V
Sbjct: 415 KANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIV 474
Query: 322 VFGSFLSACKEHKQFEMAERVIEQVLRMVKPEDDRGIYRLI 362
+ L ++ + E A + E++ + K E D GIY +I
Sbjct: 475 TYKILLDGLCDNGESEKALEIFEKIEK-SKMELDIGIYNII 514
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 111/236 (47%), Gaps = 21/236 (8%)
Query: 111 QRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLA 170
+ ++++ S++I+ G + L L R++ G KPD +T +++G L+
Sbjct: 155 EPNTITFSTLINGLCLEGRVSEALELVDRMVEM-GHKPDLITINTLVNGLC-------LS 206
Query: 171 GKSVHGFI-----VKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNV----LSW 221
GK + V+ G + NA ++N+ K G A + M ERN+ + +
Sbjct: 207 GKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKY 266
Query: 222 TALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIED 281
+ +I G + G + A +F +M + G+ N +T+ ++ +AG ++G + + +
Sbjct: 267 SIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIK 326
Query: 282 YGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTM---KVEPNVVVFGSFLSA-CKEH 333
+ P V ++ L+ K G+L EA E+ K M + P+ + + S + CKE+
Sbjct: 327 RKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKEN 382
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 115/246 (46%), Gaps = 15/246 (6%)
Query: 70 DACILFDEMPNR----NTVTWNTMI---VGYSRSGDVQRA-REVFEEAPQRDSVSLSSMI 121
DA LF EM N+ N +T++++I Y R D R ++ E + V+ S++I
Sbjct: 271 DALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALI 330
Query: 122 SAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKN 181
A+ G + L+ ++ I P+ T ++++G + LG K + +++
Sbjct: 331 DAFVKKGKLVKAEKLYEE-MIKRSIDPNIFTYSSLINGFCMLDRLG--EAKQMLELMIRK 387
Query: 182 GWELNAELGATLVNMYAKGGVLRNAAMVFELMVER----NVLSWTALICGAAQWGFCEEA 237
N TL+N + K + +F M +R N +++T LI G Q C+ A
Sbjct: 388 DCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNA 447
Query: 238 LVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYL 297
+VF++M GV PN LT+ +L G + + F+ ++ MEP ++ Y ++
Sbjct: 448 QMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEG 507
Query: 298 VGKSGR 303
+ K+G+
Sbjct: 508 MCKAGK 513
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/274 (20%), Positives = 123/274 (44%), Gaps = 41/274 (14%)
Query: 82 NTVTWNTMIVGYSRSGDVQRA----REVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLF 137
+ VT N+++ G+ + A ++ E + D+V+ +++I + + ++L
Sbjct: 147 DIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALI 206
Query: 138 RRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMY 197
R ++ G +PD VT GAV++G G + +L L+N
Sbjct: 207 DR-MVQRGCQPDLVTYGAVVNGLCKRG---------------------DTDLALNLLNKM 244
Query: 198 AKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFT 257
+ E NV+ ++ +I ++ ++AL +F +M GVRPN +T++
Sbjct: 245 EAAKI------------EANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYS 292
Query: 258 GVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRL---EEAYEIIKTM 314
++S + G + R + + + P + +++L+ K G+L E+ YE +
Sbjct: 293 SLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKR 352
Query: 315 KVEPNVVVFGSFLSACKEHKQFEMAERVIEQVLR 348
++PN+ + S ++ + A++++E ++R
Sbjct: 353 SIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIR 386
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/265 (21%), Positives = 119/265 (44%), Gaps = 15/265 (5%)
Query: 82 NTVTWNTMIVGYSRSGDVQRAREVFEEAPQR----DSVSLSSMISAYNNIGSSKQGLSLF 137
N V ++T+I + A +F E + + ++ SS+IS N G L
Sbjct: 252 NVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLL 311
Query: 138 RRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMY 197
++ I P+ VT A++ G L + + ++ ++K + N ++L+N +
Sbjct: 312 SD-MIERKINPNLVTFSALIDAFVKKGKL--VKAEKLYEEMIKRSIDPNIFTYSSLINGF 368
Query: 198 AKGGVLRNAAMVFELMVER----NVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNE 253
L A + ELM+ + NV+++ LI G + ++ + +F +M G+ N
Sbjct: 369 CMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNT 428
Query: 254 LTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEA---YEI 310
+T+T ++ A + + FK + G+ P + Y L+ + K+G+L +A +E
Sbjct: 429 VTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEY 488
Query: 311 IKTMKVEPNVVVFGSFLSA-CKEHK 334
++ +EP++ + + CK K
Sbjct: 489 LQRSTMEPDIYTYNIMIEGMCKAGK 513
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 106/222 (47%), Gaps = 21/222 (9%)
Query: 70 DACILFDEMPNR----NTVTWNTMIVGYSRSGDVQRAREVFEEAPQR----DSVSLSSMI 121
DA L +M R N VT++ +I + + G + +A +++EE +R + + SS+I
Sbjct: 306 DASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLI 365
Query: 122 SAY---NNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFI 178
+ + + +G +KQ L L R + P+ VT +++G + G + +
Sbjct: 366 NGFCMLDRLGEAKQMLELMIR----KDCLPNVVTYNTLINGFCKAKRVD--KGMELFREM 419
Query: 179 VKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVE----RNVLSWTALICGAAQWGFC 234
+ G N TL++ + + NA MVF+ MV N+L++ L+ G + G
Sbjct: 420 SQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKL 479
Query: 235 EEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYF 276
+A+VVFE ++ + + P+ T+ ++ AG + G YF
Sbjct: 480 AKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWKMGGIYF 521
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 138/305 (45%), Gaps = 19/305 (6%)
Query: 43 IIKLGFAPTHLHVANCLLNAYVLLSFLDACILFDEMPNR----NTVTWNTMIVGYSRSGD 98
+I+ G P + N + F +A + +M N ++ T+NT+I GY + G
Sbjct: 277 LIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGM 336
Query: 99 VQRAREVFEEAPQR----DSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAG 154
VQ A + +A D + S+I + G + + L+LF L +GIKP+ +
Sbjct: 337 VQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEA-LGKGIKPNVILYN 395
Query: 155 AVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMV 214
++ G ++ G +L + + + G + LVN K G + +A + ++M+
Sbjct: 396 TLIKGLSNQGM--ILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMI 453
Query: 215 ER----NVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVE 270
+ ++ ++ LI G + E AL + + M GV P+ T+ +L+ E
Sbjct: 454 SKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFE 513
Query: 271 EGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMK---VEPNVVVFGSFL 327
+ +K + + G P + + L+ + + +L+EA +++ MK V P+ V FG+ +
Sbjct: 514 DVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLI 573
Query: 328 SA-CK 331
CK
Sbjct: 574 DGFCK 578
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/275 (20%), Positives = 120/275 (43%), Gaps = 16/275 (5%)
Query: 85 TWNTMIVGYSRSGDVQRAREVFEEAPQR----DSVSLSSMISAYNNIGSSKQGLSLFRRV 140
T+N ++ + GDV+ ++ ++ +R + + + I G + +
Sbjct: 218 TFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVG-C 276
Query: 141 LLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKG 200
L+ +G KPD +T ++ G + G +V G E ++ TL+ Y KG
Sbjct: 277 LIEQGPKPDVITYNNLIYGLCKNSKFQ--EAEVYLGKMVNEGLEPDSYTYNTLIAGYCKG 334
Query: 201 GVLRNAA-----MVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELT 255
G+++ A VF V + ++ +LI G G AL +F + G++PN +
Sbjct: 335 GMVQLAERIVGDAVFNGFVP-DQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVIL 393
Query: 256 FTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMK 315
+ ++ ++ G++ E + + + G+ P+V + LV + K G + +A ++K M
Sbjct: 394 YNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMI 453
Query: 316 VE---PNVVVFGSFLSACKEHKQFEMAERVIEQVL 347
+ P++ F + + E A +++ +L
Sbjct: 454 SKGYFPDIFTFNILIHGYSTQLKMENALEILDVML 488
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 109/247 (44%), Gaps = 10/247 (4%)
Query: 82 NTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLFRRVL 141
N V +NT++ ++G V RAR + E + + V+ + +ISAY N Q + L +
Sbjct: 216 NAVVYNTLLHALCKNGKVGRARSLMSEMKEPNDVTFNILISAYCNEQKLIQSMVLLEKCF 275
Query: 142 LFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGG 201
G PD VT V+ + G + V + G +++ TLV Y G
Sbjct: 276 SL-GFVPDVVTVTKVMEVLCNEGRVS--EALEVLERVESKGGKVDVVACNTLVKGYCALG 332
Query: 202 VLRNAAMVFELMVER----NVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFT 257
+R A F M + NV ++ LI G G + AL F M+ +R N TF
Sbjct: 333 KMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFN 392
Query: 258 GVLSACAHAGLVEEGRRYFKMIEDYGM--EPKVHHYASLVYLVGKSGRLEEAYE-IIKTM 314
++ + G ++G + +M++D ++ Y ++Y K R E+A E ++K
Sbjct: 393 TLIRGLSIGGRTDDGLKILEMMQDSDTVHGARIDPYNCVIYGFYKENRWEDALEFLLKME 452
Query: 315 KVEPNVV 321
K+ P V
Sbjct: 453 KLFPRAV 459
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 134/281 (47%), Gaps = 12/281 (4%)
Query: 80 NRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNIGSS----KQGLS 135
N T T+NT+I GY +G +R+ E+ + + +V + I +N + + K+
Sbjct: 147 NPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEE 206
Query: 136 LFRRVLLFE--GIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATL 193
+ V E G++PD VT + + G + V ++K + N +
Sbjct: 207 AWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIV 266
Query: 194 VNMYAKGGVLRNA----AMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGV 249
V Y + G +R+ + E+ VE N++ + +LI G + + V M+ V
Sbjct: 267 VGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVLTLMKECNV 326
Query: 250 RPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYE 309
+ + +T++ V++A + AG +E+ + FK + G++P H Y+ L ++ ++A E
Sbjct: 327 KADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEE 386
Query: 310 IIKTMKVE--PNVVVFGSFLSACKEHKQFEMAERVIEQVLR 348
+++T+ VE PNVV+F + +S + + A RV ++ +
Sbjct: 387 LLETLIVESRPNVVIFTTVISGWCSNGSMDDAMRVFNKMCK 427
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/304 (22%), Positives = 142/304 (46%), Gaps = 46/304 (15%)
Query: 68 FLDACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNI 127
FL + +P+ TV++NT+I G+ + G+ RA+ + +E + + ++ + ++S+Y N+
Sbjct: 183 FLSEMVKMGILPD--TVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTILLSSYYNL 240
Query: 128 GSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSL---GLLAGK------------ 172
+ ++ R ++ G PD VT ++++ G + GLL +
Sbjct: 241 HAIEEAY----RDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVT 296
Query: 173 ------------------SVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMV 214
+++ +V G ++ + L++ K G LR A F++++
Sbjct: 297 YTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLL 356
Query: 215 ERN----VLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVE 270
E N V+++TAL+ G + G A + +M V PN +T++ +++ G++E
Sbjct: 357 EDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLE 416
Query: 271 EGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMK---VEPNVVVFGSFL 327
E + +ED + P Y +++ + K+G+ E A E+ K M+ VE N + + +
Sbjct: 417 EAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALV 476
Query: 328 SACK 331
+ K
Sbjct: 477 NHLK 480
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/321 (22%), Positives = 145/321 (45%), Gaps = 50/321 (15%)
Query: 73 ILFDEMPNRNTVTWNTMIVGYSRSGDVQRAR----EVFEEAPQRDSVSLSSMISAYNNIG 128
+L ++ N VT+ ++ G ++GD+ A ++ E++ + V+ SSMI+ Y G
Sbjct: 354 MLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKG 413
Query: 129 SSKQGLSLFRRVLLFEGIKPDQVTAGAVLSG----------------------------- 159
++ +SL R+ + + + P+ T G V+ G
Sbjct: 414 MLEEAVSLLRK-MEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYIL 472
Query: 160 ---CAHMGSLGLLAGKSVHGFI---VKNGWELNAELGATLVNMYAKGGVLRNAAMVFELM 213
H+ +G + K V G + V G L+ +L++++ KGG A E M
Sbjct: 473 DALVNHLKRIGRI--KEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEM 530
Query: 214 VER----NVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLV 269
ER +V+S+ LI G ++G A ++ MR G+ P+ TF ++++ G
Sbjct: 531 QERGMPWDVVSYNVLISGMLKFGKVG-ADWAYKGMREKGIEPDIATFNIMMNSQRKQGDS 589
Query: 270 EEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTM---KVEPNVVVFGSF 326
E + + ++ G++P + +V ++ ++G++EEA I+ M ++ PN+ + F
Sbjct: 590 EGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIF 649
Query: 327 LSACKEHKQFEMAERVIEQVL 347
L +HK+ + + E +L
Sbjct: 650 LDTSSKHKRADAIFKTHETLL 670
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 71/321 (22%), Positives = 152/321 (47%), Gaps = 24/321 (7%)
Query: 39 LHAHIIKLGFAPTHLHVANCLLNAYVLLSFLDACI--LFDEMPNRNTVTWNTMIVGYSRS 96
+++ +I G +P + N L++++ + L I L + + + +TVT+NT+I G
Sbjct: 116 IYSKMIACGVSP-DVFALNVLIHSFCKVGRLSFAISLLRNRVISIDTVTYNTVISGLCEH 174
Query: 97 GDVQRAREVFEEAPQR----DSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVT 152
G A + E + D+VS +++I + +G+ + + L+ E + + +T
Sbjct: 175 GLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRA-----KALVDEISELNLIT 229
Query: 153 AGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFEL 212
+LS ++ ++ + + +V +G++ + ++++N KGG + ++
Sbjct: 230 HTILLSSYYNLHAI-----EEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLRE 284
Query: 213 MVERNV----LSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGL 268
M E +V +++T L+ + AL ++ +M V G+ + + +T ++ AG
Sbjct: 285 MEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGD 344
Query: 269 VEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTM---KVEPNVVVFGS 325
+ E + FKM+ + P V Y +LV + K+G L A II M V PNVV + S
Sbjct: 345 LREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSS 404
Query: 326 FLSACKEHKQFEMAERVIEQV 346
++ + E A ++ ++
Sbjct: 405 MINGYVKKGMLEEAVSLLRKM 425
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/238 (20%), Positives = 108/238 (45%), Gaps = 13/238 (5%)
Query: 82 NTVTWNTMIVGYSRSGDVQRAREVFEEAP----QRDSVSLSSMISAYNNIGSSKQGLSLF 137
+ T+N M+ + GD + +++++ + +S + ++ G ++ + +
Sbjct: 572 DIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHIL 631
Query: 138 RRVLLFEGIKPDQVTAGAVL-SGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNM 196
+++L E I P+ T L + H + + H ++ G +L+ ++ TL+
Sbjct: 632 NQMMLME-IHPNLTTYRIFLDTSSKHKRADAIF---KTHETLLSYGIKLSRQVYNTLIAT 687
Query: 197 YAKGGVLRNAAMVFELMVER----NVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPN 252
K G+ + AAMV M R + +++ +L+ G +AL + M AG+ PN
Sbjct: 688 LCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPN 747
Query: 253 ELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEI 310
T+ ++ + AGL++E ++ ++ GM P Y +L+ K G ++ + I
Sbjct: 748 VATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTI 805
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 81/376 (21%), Positives = 153/376 (40%), Gaps = 52/376 (13%)
Query: 1 MHLYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLL 60
++L+ ++ G+P + C L +C L++ +IKLG P+ + + LL
Sbjct: 101 IYLWEQMQMLGIPHN-LCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGS-LL 158
Query: 61 NAYVLLS-FLDACILFDEMP----NRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQR--- 112
N + DA +FD+M N V +NT+I G +S V A ++ +
Sbjct: 159 NGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIG 218
Query: 113 -DSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLG---- 167
D V+ +S+IS + G + + E I PD T A++ C G +
Sbjct: 219 PDVVTYNSLISGLCSSGRWSDATRMVSCMTKRE-IYPDVFTFNALIDACVKEGRVSEAEE 277
Query: 168 -----------------------------LLAGKSVHGFIVKNGWELNAELGATLVNMYA 198
L + + GF+V G + + L+N Y
Sbjct: 278 FYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYC 337
Query: 199 KGGVLRNAAMVFELM----VERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNEL 254
K + + +F M V RN +++T LI G + G A +F +M GV PN +
Sbjct: 338 KSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNII 397
Query: 255 TFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTM 314
T+ +L G +E+ ++ GM+ + Y ++ + K+G + +A++I ++
Sbjct: 398 TYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSL 457
Query: 315 KVE---PNVVVFGSFL 327
+ P++ + + +
Sbjct: 458 NCQGLMPDIWTYTTMM 473
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 109/244 (44%), Gaps = 22/244 (9%)
Query: 145 GIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGF--IVKNGWELNAELGATLVNMYAKGGV 202
G +P VT G++L+G G +++ F +V G++ N + T+++ K
Sbjct: 146 GHEPSIVTFGSLLNGFCR----GDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQ 201
Query: 203 LRNAAMVFELM----VERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTG 258
+ NA + M + +V+++ +LI G G +A + M + P+ TF
Sbjct: 202 VDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNA 261
Query: 259 VLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMKVE- 317
++ AC G V E +++ + ++P + Y+ L+Y + RL+EA E+ M +
Sbjct: 262 LIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKG 321
Query: 318 --PNVVVFGSFLSA-CKEHKQFEMAERVIEQVLRMVKPEDDRGIYRLIHDLYVMGEKWEE 374
P+VV + ++ CK K +E +++ RG+ R ++ + +
Sbjct: 322 CFPDVVTYSILINGYCKSKK--------VEHGMKLFCEMSQRGVVRNTVTYTILIQGYCR 373
Query: 375 AAKL 378
A KL
Sbjct: 374 AGKL 377
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 86/180 (47%), Gaps = 11/180 (6%)
Query: 82 NTVTWNTMIVGYSRSGDVQRAREVFEEAPQR----DSVSLSSMISAYNNIGSSKQGLSLF 137
+ VT++ +I GY +S V+ ++F E QR ++V+ + +I Y G +F
Sbjct: 325 DVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIF 384
Query: 138 RRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMY 197
RR ++F G+ P+ +T +L G G + + + KNG + + ++
Sbjct: 385 RR-MVFCGVHPNIITYNVLLHGLCDNGKIE--KALVILADMQKNGMDADIVTYNIIIRGM 441
Query: 198 AKGGVLRNAAMVFELM----VERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNE 253
K G + +A ++ + + ++ ++T ++ G + G EA +F KM+ G+ PNE
Sbjct: 442 CKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPNE 501
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 108/205 (52%), Gaps = 10/205 (4%)
Query: 178 IVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVER-----NVLSWTALICGAAQWG 232
I+K G+ L++ +G +L+ + +G LR+A VF++M + N +S++ LI G + G
Sbjct: 221 ILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVG 280
Query: 233 FCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYA 292
EEA + ++M G +P+ T+T ++ A GL+++ F + G +P VH Y
Sbjct: 281 RLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYT 340
Query: 293 SLVYLVGKSGRLEEAYEIIKTM---KVEPNVVVFGSFLSA-CKEHKQFEMAERVIEQVLR 348
L+ + + G++EEA + + M ++ P+V+ + + ++ CK+ + E + R
Sbjct: 341 VLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKR 400
Query: 349 MVKPEDDRGIYRLIHDLYVMGEKWE 373
KP + R L+ L +G+ ++
Sbjct: 401 ACKP-NVRTFNELMEGLCRVGKPYK 424
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 64/301 (21%), Positives = 135/301 (44%), Gaps = 15/301 (4%)
Query: 82 NTVTWNTMIVGYSRSGDVQRA----REVFEEAPQRDSVSLSSMISAYNNIGSSKQGLSLF 137
N T+N ++ G R G +A + + + D VS + +I G L
Sbjct: 405 NVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLL 464
Query: 138 RRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMY 197
+ F+ I+PD +T A+++ G + + G +++ G L+ G TL++
Sbjct: 465 SSMNCFD-IEPDCLTFTAIINAFCKQGKADV--ASAFLGLMLRKGISLDEVTGTTLIDGV 521
Query: 198 AKGGVLRNAAMVFELMVERNVL----SWTALICGAAQWGFCEEALVVFEKMRVAGVRPNE 253
K G R+A + E +V+ +L S ++ ++ +E L + K+ G+ P+
Sbjct: 522 CKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSV 581
Query: 254 LTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKT 313
+T+T ++ +G + R ++++ G P V+ Y ++ + + GR+EEA +++
Sbjct: 582 VTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSA 641
Query: 314 MK---VEPNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPEDDRGIYRLIHDLYVMGE 370
M+ V PN V + + + + + A + ++ +DR IY + +V+ +
Sbjct: 642 MQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDR-IYSSLLQGFVLSQ 700
Query: 371 K 371
K
Sbjct: 701 K 701
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 135/299 (45%), Gaps = 27/299 (9%)
Query: 74 LFDEMPNRNTVTWNTMIVGYSRSGDVQRAREV------FEEAPQRDSVSLSSMISAYNNI 127
+ D + + V++N +I G R G + A ++ F+ P D ++ +++I+A+
Sbjct: 432 MLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEP--DCLTFTAIINAFCKQ 489
Query: 128 GSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLG---LLAGKSVHGFIVKNGWE 184
G + S F ++L +GI D+VT ++ G +G + V I+
Sbjct: 490 GKADVA-SAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHS 548
Query: 185 LNAELGATLVNMYAKG-GVLRNAAM---VFELMVERNVLSWTALICGAAQWGFCEEALVV 240
LN +++M +KG V AM + +L + +V+++T L+ G + G + +
Sbjct: 549 LNV-----ILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRI 603
Query: 241 FEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGK 300
E M+++G PN +T +++ G VEE + ++D G+ P Y +V
Sbjct: 604 LELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVN 663
Query: 301 SGRLEEAYEIIKTM---KVEPNVVVFGSFLSA-CKEHKQFEMAER--VIEQVLRMVKPE 353
+G+L+ A E ++ M E N ++ S L K + +E V + LR PE
Sbjct: 664 NGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALRETDPE 722
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 117/263 (44%), Gaps = 20/263 (7%)
Query: 87 NTMIVGYSRSGDVQRAREVFEEAPQR-----DSVSLSSMISAYNNIGSSKQGLSLFRRVL 141
++++G+ R +++ A +VF+ + +SVS S +I +G ++ L + +
Sbjct: 234 TSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGL-KDQM 292
Query: 142 LFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGF--IVKNGWELNAELGATLVNMYAK 199
+G +P T ++ G L K+ + F ++ G + N L++ +
Sbjct: 293 GEKGCQPSTRTYTVLIKALCDRG----LIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCR 348
Query: 200 GGVLRNAAMVFELMVER----NVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELT 255
G + A V MV+ +V+++ ALI G + G A + M +PN T
Sbjct: 349 DGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRT 408
Query: 256 FTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMK 315
F ++ G + K + D G+ P + Y L+ + + G + AY+++ +M
Sbjct: 409 FNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMN 468
Query: 316 ---VEPNVVVFGSFLSA-CKEHK 334
+EP+ + F + ++A CK+ K
Sbjct: 469 CFDIEPDCLTFTAIINAFCKQGK 491
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/276 (22%), Positives = 126/276 (45%), Gaps = 16/276 (5%)
Query: 82 NTVTWNTMIVGYSRSGDVQRAREVFEEAPQR----DSVSLSSMISAYNNIGSSKQGLSLF 137
+ +T+ T++ G+ ++G++ A EV++E ++ D + ++ +G S + L
Sbjct: 443 DVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLH 502
Query: 138 RRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMY 197
++ + PD + G +G+L + I + G + T++ Y
Sbjct: 503 EEMVATDHHAPDLTIYNVRIDGLCKVGNL--VKAIEFQRKIFRVGLVPDHVTYTTVIRGY 560
Query: 198 AKGGVLRNAAMVFELMVER----NVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNE 253
+ G + A +++ M+ + +V+++ LI G A+ G E+A +M+ GVRPN
Sbjct: 561 LENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNV 620
Query: 254 LTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKT 313
+T +L AG ++E RY +E+ G+ P + Y L+ + EE ++ K
Sbjct: 621 MTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKE 680
Query: 314 M---KVEPNVVVFGSF---LSACKEHKQFEMAERVI 343
M ++EP+ + L E ++ E ER++
Sbjct: 681 MLDKEIEPDGYTHRALFKHLEKDHESREVEFLERLL 716
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 76/330 (23%), Positives = 135/330 (40%), Gaps = 34/330 (10%)
Query: 70 DACILFDEMPNRNTVTWNTMIVGYSRSGDVQRAREVFEEAPQRDSVSLSSMISAYNNI-- 127
DA L M + V++NT++ GY + G A +F++ D + I YN +
Sbjct: 361 DARELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGD---IHPSIVTYNTLID 417
Query: 128 ----GSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGW 183
+ +G + + + I PD +T ++ G G+L + V+ +++ G
Sbjct: 418 GLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSM--ATEVYDEMLRKGI 475
Query: 184 ELNAELGATLVNMYAKGGVLRNAAMVFELMVER-----NVLSWTALICGAAQWGFCEEAL 238
+ + T + G A + E MV ++ + I G + G +A+
Sbjct: 476 KPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAI 535
Query: 239 VVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLV 298
K+ G+ P+ +T+T V+ G + R + + + P V Y L+Y
Sbjct: 536 EFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGH 595
Query: 299 GKSGRLEEAYEIIKTMK---VEPNVVVFGSFL-SACKEHKQFEMAERVIEQVLRMVKPED 354
K+GRLE+A++ MK V PNV+ + L CK I++ R + +
Sbjct: 596 AKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGN--------IDEAYRYLCKME 647
Query: 355 DRGI------YRLIHDLYVMGEKWEEAAKL 378
+ GI Y ++ EKWEE KL
Sbjct: 648 EEGIPPNKYSYTMLISKNCDFEKWEEVVKL 677
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 74/327 (22%), Positives = 142/327 (43%), Gaps = 54/327 (16%)
Query: 3 LYSKLHRTGVPFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLLNA 62
L++K+ G+ D F L SC + + L + +++ P L N L++A
Sbjct: 272 LFNKMETKGIKPDVF-TYNPLISCLCNYGRWSDASRLLSDMLEKNINP-DLVFFNALIDA 329
Query: 63 YVLL-SFLDACILFDEMPNR-----NTVTWNTMIVGYSRSGDVQRAREVFEEAPQR---- 112
+V ++A L+DEM + V +NT+I G+ + V+ EVF E QR
Sbjct: 330 FVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVG 389
Query: 113 DSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGK 172
++V+ +++I + +F++ ++ +G+ PD +T +L G + G++
Sbjct: 390 NTVTYTTLIHGFFQARDCDNAQMVFKQ-MVSDGVHPDIMTYNILLDGLCNNGNV------ 442
Query: 173 SVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERN----VLSWTALICGA 228
A +VFE M +R+ ++++T +I
Sbjct: 443 -------------------------------ETALVVFEYMQKRDMKLDIVTYTTMIEAL 471
Query: 229 AQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKV 288
+ G E+ +F + + GV+PN +T+T ++S GL EE F +++ G P
Sbjct: 472 CKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNS 531
Query: 289 HHYASLVYLVGKSGRLEEAYEIIKTMK 315
Y +L+ + G + E+IK M+
Sbjct: 532 GTYNTLIRARLRDGDEAASAELIKEMR 558
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/347 (19%), Positives = 148/347 (42%), Gaps = 48/347 (13%)
Query: 13 PFDSFCIVFTLKSCTSHLHSLTIIQHLHAHIIKLGFAPTHLHVANCLLNAYVLLSFLD-A 71
PF S L S + ++ ++ L + LG + +L+ + +N + S L A
Sbjct: 71 PFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGIS-HNLYTYSIFINYFCRRSQLSLA 129
Query: 72 CILFDEMPN----RNTVTWNTMIVGYSRSGDVQRA----REVFEEAPQRDSVSLSSMISA 123
+ +M + VT N+++ G+ + A ++ E Q D+V+ ++++
Sbjct: 130 LAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHG 189
Query: 124 YNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGW 183
+ + ++L R+++ +G +PD VT GAV++G G
Sbjct: 190 LFQHNKASEAVALVERMVV-KGCQPDLVTYGAVINGLCKRGE------------------ 230
Query: 184 ELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEK 243
+L L+N KG + E +V+ + +I G ++ ++A +F K
Sbjct: 231 ---PDLALNLLNKMEKGKI------------EADVVIYNTIIDGLCKYKHMDDAFDLFNK 275
Query: 244 MRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGR 303
M G++P+ T+ ++S + G + R + + + P + + +L+ K G+
Sbjct: 276 METKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGK 335
Query: 304 LEEAY----EIIKTMKVEPNVVVFGSFLSACKEHKQFEMAERVIEQV 346
L EA E++K+ P+VV + + + ++K+ E V ++
Sbjct: 336 LVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREM 382
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 124/275 (45%), Gaps = 17/275 (6%)
Query: 70 DACILFDEMPNR----NTVTWNTMI---VGYSRSGDVQRA-REVFEEAPQRDSVSLSSMI 121
DA LF++M + + T+N +I Y R D R ++ E+ D V +++I
Sbjct: 268 DAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALI 327
Query: 122 SAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKN 181
A+ G + L+ ++ + PD V ++ G + G V + +
Sbjct: 328 DAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVE--EGMEVFREMSQR 385
Query: 182 GWELNAELGATLVNMYAKGGVLRNAAMVFELMVER----NVLSWTALICGAAQWGFCEEA 237
G N TL++ + + NA MVF+ MV +++++ L+ G G E A
Sbjct: 386 GLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETA 445
Query: 238 LVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYL 297
LVVFE M+ ++ + +T+T ++ A AG VE+G F + G++P V Y +++
Sbjct: 446 LVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSG 505
Query: 298 VGKSGRLEEAYEIIKTMKVE---PNVVVFGSFLSA 329
+ G EEA + MK + PN + + + A
Sbjct: 506 FCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRA 540
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 76/339 (22%), Positives = 152/339 (44%), Gaps = 47/339 (13%)
Query: 45 KLGFAPTHLHVANCLLNAYVLL-SFLDACILFDEMP----NRNTVTWNTMIVGYSRSGDV 99
K G +P H + L++AYV + A I+ EM N+ ++ ++ G+ G+
Sbjct: 367 KRGVSPDE-HTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEW 425
Query: 100 QRAREVFEE------APQRDSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTA 153
Q+ +V +E P R ++ +I + ++ F R +L EGI+PD+VT
Sbjct: 426 QKTFQVLKEMKSIGVKPDRQFYNV--VIDTFGKFNCLDHAMTTFDR-MLSEGIEPDRVTW 482
Query: 154 GAVLS-GCAH------------MGSLGLLAGKSVHGFIVKN--GWELNAELGATLVNMYA 198
++ C H M G L + + ++ + E ++ L M +
Sbjct: 483 NTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKS 542
Query: 199 KGGVLRNAAMVFELMVERNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTG 258
+G + NV++ T L+ + G +A+ E+M+ G++P+ +
Sbjct: 543 QG-------------ILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNA 589
Query: 259 VLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMK--- 315
+++A A GL E+ F+++ G++P + SL+ G+ R EA+ +++ MK
Sbjct: 590 LINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENG 649
Query: 316 VEPNVVVFGSFLSACKEHKQFEMAERVIEQ-VLRMVKPE 353
V+P+VV + + + A +F+ V E+ ++ KP+
Sbjct: 650 VKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCKPD 688
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 106/231 (45%), Gaps = 10/231 (4%)
Query: 144 EGIKPDQVTAGAVLSGCAHMGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVL 203
+G + D V V+ + + ++ I ++ EL+ +L ++ +AK G
Sbjct: 226 DGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSGDP 285
Query: 204 RNAAMVFELMVERNVLSWTA----LICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGV 259
A + + + + TA +I A G EA +FE++R +G++P + +
Sbjct: 286 SKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNAL 345
Query: 260 LSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTMK---V 316
L G +++ +E G+ P H Y+ L+ +GR E A ++K M+ V
Sbjct: 346 LKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDV 405
Query: 317 EPNVVVFGSFLSACKEHKQFEMAERVIEQVLRM-VKPEDDRGIYRLIHDLY 366
+PN VF L+ ++ +++ +V++++ + VKP DR Y ++ D +
Sbjct: 406 QPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKP--DRQFYNVVIDTF 454
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 86/372 (23%), Positives = 145/372 (38%), Gaps = 75/372 (20%)
Query: 43 IIKLGFAPTHLHVANCLLNAYVLLSFLDACILFDEMPNR--------------------- 81
I KL P +A CL LS D ++F E R
Sbjct: 80 INKLSSLPPRGSIARCLDIFKNKLSLNDFALVFKEFAGRGDWQRSLRLFKYMQRQIWCKP 139
Query: 82 NTVTWNTMIVGYSRSGDVQRAREVFEEAP----QRDSVSLSSMISAYNNIGSSKQGLSLF 137
N + MI R G + + EVF+E P R S +++I+AY G + L L
Sbjct: 140 NEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELL 199
Query: 138 RRV-----------------------------------LLFEGIKPDQVTAGAVLSGCAH 162
R+ + EGI+PD VT +LS CA
Sbjct: 200 DRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAI 259
Query: 163 MGSLGLLAGKSVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVE------- 215
G L ++ F N + +L T ++ G LR V +L+ E
Sbjct: 260 RG----LGDEAEMVFRTMNDGGIVPDL-TTYSHLVETFGKLRRLEKVCDLLGEMASGGSL 314
Query: 216 RNVLSWTALICGAAQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRY 275
++ S+ L+ A+ G +EA+ VF +M+ AG PN T++ +L+ +G ++ R+
Sbjct: 315 PDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQL 374
Query: 276 FKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAYEIIKTM---KVEPNVVVFGSFLSACKE 332
F ++ +P Y L+ + G+ G +E + M +EP++ + + AC +
Sbjct: 375 FLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGK 434
Query: 333 HKQFEMAERVIE 344
E A ++++
Sbjct: 435 GGLHEDARKILQ 446
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 95/194 (48%), Gaps = 9/194 (4%)
Query: 193 LVNMYAKGGVLRNAAMVFELM----VERNVLSWTALICGAAQWGFCEEALV-VFEKMRVA 247
L+N Y + G + + + M + ++L++ +I A+ G E L+ +F +MR
Sbjct: 182 LINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHE 241
Query: 248 GVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEA 307
G++P+ +T+ +LSACA GL +E F+ + D G+ P + Y+ LV GK RLE+
Sbjct: 242 GIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKV 301
Query: 308 YEIIKTMKVE---PNVVVFGSFLSACKEHKQFEMAERVIEQVLRMVKPEDDRGIYRLIHD 364
+++ M P++ + L A + + A V Q ++ + Y ++ +
Sbjct: 302 CDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQ-MQAAGCTPNANTYSVLLN 360
Query: 365 LYVMGEKWEEAAKL 378
L+ ++++ +L
Sbjct: 361 LFGQSGRYDDVRQL 374
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/253 (21%), Positives = 111/253 (43%), Gaps = 10/253 (3%)
Query: 113 DSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCAHMGSLGLLAGK 172
D S + ++ AY GS K+ + +F + + G P+ T +L+ G + +
Sbjct: 316 DITSYNVLLEAYAKSGSIKEAMGVFHQ-MQAAGCTPNANTYSVLLNLFGQSGRYDDV--R 372
Query: 173 SVHGFIVKNGWELNAELGATLVNMYAKGGVLRNAAMVFELMVERNVL----SWTALICGA 228
+ + + + +A L+ ++ +GG + +F MVE N+ ++ +I
Sbjct: 373 QLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFAC 432
Query: 229 AQWGFCEEALVVFEKMRVAGVRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKV 288
+ G E+A + + M + P+ +TGV+ A A L EE F + + G P +
Sbjct: 433 GKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSI 492
Query: 289 HHYASLVYLVGKSGRLEEAYEIIKTM---KVEPNVVVFGSFLSACKEHKQFEMAERVIEQ 345
+ SL+Y + G ++E+ I+ + + N F + + A K+ +FE A +
Sbjct: 493 ETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVD 552
Query: 346 VLRMVKPEDDRGI 358
+ + D+R +
Sbjct: 553 MEKSRCDPDERTL 565
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 136/306 (44%), Gaps = 51/306 (16%)
Query: 57 NCLLNAYVLL-SFLDACILFDEM------PNRNTVTWNTMIVGYSRSGDVQRAREVFEEA 109
N LL AY S +A +F +M PN NT ++ ++ + +SG R++F E
Sbjct: 321 NVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANT--YSVLLNLFGQSGRYDDVRQLFLEM 378
Query: 110 PQR----DSVSLSSMISAYNNIGSSKQGLSLFRRVLLFEGIKPDQVTAGAVLSGCA---- 161
D+ + + +I + G K+ ++LF ++ E I+PD T ++ C
Sbjct: 379 KSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHD-MVEENIEPDMETYEGIIFACGKGGL 437
Query: 162 HMGSLGLL----------AGKSVHGFIVKNG-----------WELNAELGA--------T 192
H + +L + K+ G I G + E+G+ +
Sbjct: 438 HEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHS 497
Query: 193 LVNMYAKGGVLRNAAMVFELMVE----RNVLSWTALICGAAQWGFCEEALVVFEKMRVAG 248
L+ +A+GG+++ + + +V+ RN ++ A I Q G EEA+ + M +
Sbjct: 498 LLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSR 557
Query: 249 VRPNELTFTGVLSACAHAGLVEEGRRYFKMIEDYGMEPKVHHYASLVYLVGKSGRLEEAY 308
P+E T VLS + A LV+E R F+ ++ + P + Y ++ + GK+ R ++
Sbjct: 558 CDPDERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCMMLAVYGKTERWDDVN 617
Query: 309 EIIKTM 314
E+++ M
Sbjct: 618 ELLEEM 623