Miyakogusa Predicted Gene
- Lj1g3v4819930.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v4819930.1 Non Chatacterized Hit- tr|I1JQZ9|I1JQZ9_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.3106
PE=,75.98,0,DEAD,DNA/RNA helicase, DEAD/DEAH box type, N-terminal;
GUCT,GUCT; Helicase_C,Helicase, C-terminal; z,CUFF.33351.1
(768 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G26742.2 | Symbols: emb1138 | DEAD box RNA helicase (RH3) | c... 889 0.0
AT5G26742.1 | Symbols: emb1138 | DEAD box RNA helicase (RH3) | c... 889 0.0
AT5G26742.3 | Symbols: emb1138 | DEAD box RNA helicase (RH3) | c... 828 0.0
AT3G22330.1 | Symbols: PMH2, ATRH53 | putative mitochondrial RNA... 494 e-140
AT3G22310.1 | Symbols: PMH1, ATRH9 | putative mitochondrial RNA ... 484 e-137
AT5G62190.1 | Symbols: PRH75 | DEAD box RNA helicase (PRH75) | c... 337 2e-92
AT3G01540.1 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 | ... 256 4e-68
AT3G01540.4 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 | ... 256 4e-68
AT3G01540.3 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 | ... 256 4e-68
AT3G01540.2 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 | ... 256 4e-68
AT1G55150.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 253 5e-67
AT5G14610.2 | Symbols: | DEAD box RNA helicase family protein |... 251 2e-66
AT3G06480.1 | Symbols: | DEAD box RNA helicase family protein |... 247 2e-65
AT5G14610.1 | Symbols: | DEAD box RNA helicase family protein |... 245 9e-65
AT5G63120.2 | Symbols: | P-loop containing nucleoside triphosph... 241 2e-63
AT2G42520.1 | Symbols: | P-loop containing nucleoside triphosph... 240 2e-63
AT3G58510.3 | Symbols: | DEA(D/H)-box RNA helicase family prote... 237 2e-62
AT3G58510.2 | Symbols: | DEA(D/H)-box RNA helicase family prote... 237 2e-62
AT3G58510.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 237 2e-62
AT3G58570.1 | Symbols: | P-loop containing nucleoside triphosph... 237 3e-62
AT1G31970.1 | Symbols: STRS1 | DEA(D/H)-box RNA helicase family ... 236 4e-62
AT1G20920.2 | Symbols: | P-loop containing nucleoside triphosph... 228 9e-60
AT1G20920.1 | Symbols: | P-loop containing nucleoside triphosph... 228 2e-59
AT2G33730.1 | Symbols: | P-loop containing nucleoside triphosph... 222 7e-58
AT1G72730.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 221 2e-57
AT2G47330.1 | Symbols: | P-loop containing nucleoside triphosph... 219 6e-57
AT5G51280.1 | Symbols: | DEAD-box protein abstrakt, putative | ... 215 1e-55
AT1G16280.1 | Symbols: RH36, AtRH36, SWA3 | RNA helicase 36 | ch... 213 5e-55
AT1G51380.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 213 5e-55
AT4G16630.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 212 7e-55
AT3G13920.1 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translat... 212 1e-54
AT3G13920.2 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translat... 211 1e-54
AT3G13920.3 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translat... 211 2e-54
AT4G33370.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 211 2e-54
AT3G13920.4 | Symbols: EIF4A1 | eukaryotic translation initiatio... 209 5e-54
AT3G09620.1 | Symbols: | P-loop containing nucleoside triphosph... 208 9e-54
AT1G54270.1 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-2026201... 208 1e-53
AT3G19760.1 | Symbols: EIF4A-III | eukaryotic initiation factor ... 207 3e-53
AT1G54270.2 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-2026201... 206 7e-53
AT5G60990.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 203 4e-52
AT4G00660.1 | Symbols: RH8, ATRH8 | RNAhelicase-like 8 | chr4:27... 203 5e-52
AT4G00660.2 | Symbols: RH8, ATRH8 | RNAhelicase-like 8 | chr4:27... 203 5e-52
AT1G77030.1 | Symbols: | hydrolases, acting on acid anhydrides,... 200 3e-51
AT5G63120.1 | Symbols: | P-loop containing nucleoside triphosph... 197 3e-50
AT2G45810.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 192 5e-49
AT1G28180.1 | Symbols: | P-loop containing nucleoside triphosph... 192 9e-49
AT3G18600.1 | Symbols: | P-loop containing nucleoside triphosph... 191 1e-48
AT3G61240.2 | Symbols: | DEA(D/H)-box RNA helicase family prote... 190 4e-48
AT3G61240.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 190 4e-48
AT5G65900.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 189 7e-48
AT5G08610.1 | Symbols: | P-loop containing nucleoside triphosph... 183 5e-46
AT5G05450.1 | Symbols: | P-loop containing nucleoside triphosph... 182 8e-46
AT5G11170.1 | Symbols: | DEAD/DEAH box RNA helicase family prot... 181 2e-45
AT5G11200.1 | Symbols: | DEAD/DEAH box RNA helicase family prot... 181 2e-45
AT5G08620.1 | Symbols: STRS2, ATRH25 | DEA(D/H)-box RNA helicase... 180 4e-45
AT1G71370.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 179 1e-44
AT5G63630.1 | Symbols: | P-loop containing nucleoside triphosph... 175 1e-43
AT3G02065.3 | Symbols: | P-loop containing nucleoside triphosph... 173 3e-43
AT3G02065.2 | Symbols: | P-loop containing nucleoside triphosph... 173 3e-43
AT1G63250.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 173 4e-43
AT1G12770.1 | Symbols: ISE1, EMB1586 | P-loop containing nucleos... 171 2e-42
AT5G11170.2 | Symbols: | DEAD/DEAH box RNA helicase family prot... 170 3e-42
AT2G07750.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 169 6e-42
AT3G16840.1 | Symbols: | P-loop containing nucleoside triphosph... 165 1e-40
AT5G11200.3 | Symbols: | DEAD/DEAH box RNA helicase family prot... 164 3e-40
AT4G09730.1 | Symbols: RH39 | RH39 | chr4:6136333-6139510 FORWAR... 158 1e-38
AT4G15850.1 | Symbols: ATRH1, RH1 | RNA helicase 1 | chr4:900142... 157 4e-38
AT3G02065.1 | Symbols: | P-loop containing nucleoside triphosph... 156 5e-38
AT3G09720.1 | Symbols: | P-loop containing nucleoside triphosph... 154 2e-37
AT2G40700.1 | Symbols: | P-loop containing nucleoside triphosph... 150 2e-36
AT5G11200.2 | Symbols: | DEAD/DEAH box RNA helicase family prot... 150 3e-36
AT5G54910.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 149 8e-36
AT4G34910.1 | Symbols: | P-loop containing nucleoside triphosph... 148 1e-35
AT3G06980.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 137 4e-32
AT3G53110.1 | Symbols: LOS4 | P-loop containing nucleoside triph... 135 1e-31
AT1G71280.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 121 2e-27
AT5G19210.2 | Symbols: | P-loop containing nucleoside triphosph... 86 7e-17
AT1G59990.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 68 2e-11
AT1G27880.1 | Symbols: | DEAD/DEAH box RNA helicase family prot... 62 2e-09
AT5G19210.1 | Symbols: | P-loop containing nucleoside triphosph... 62 2e-09
AT4G35740.1 | Symbols: RecQl3, ATRECQ3 | DEAD/DEAH box RNA helic... 60 5e-09
AT4G35740.2 | Symbols: RecQl3, ATRECQ3 | DEAD/DEAH box RNA helic... 59 9e-09
AT1G31360.1 | Symbols: RECQL2, ATRECQ2, MED34 | RECQ helicase L2... 58 2e-08
AT1G31360.2 | Symbols: RECQL2, MED34 | RECQ helicase L2 | chr1:1... 58 2e-08
AT1G35530.2 | Symbols: | DEAD/DEAH box RNA helicase family prot... 55 2e-07
AT1G35530.1 | Symbols: | DEAD/DEAH box RNA helicase family prot... 53 1e-06
AT3G02060.2 | Symbols: | DEAD/DEAH box helicase, putative | chr... 52 2e-06
AT3G02060.1 | Symbols: | DEAD/DEAH box helicase, putative | chr... 52 2e-06
AT5G27680.1 | Symbols: RECQSIM | RECQ helicase SIM | chr5:979424... 51 4e-06
>AT5G26742.2 | Symbols: emb1138 | DEAD box RNA helicase (RH3) |
chr5:9285540-9288871 REVERSE LENGTH=748
Length = 748
Score = 889 bits (2296), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 449/645 (69%), Positives = 527/645 (81%), Gaps = 11/645 (1%)
Query: 4 ITTVVGVSSAYQPPSLK--RPTTATISPSPASVKLLPCLVDTTKVSRSIR-HPT--FVPS 58
+ + VGV S YQ P L+ +P + S + P + V R+ R H + VPS
Sbjct: 1 MASTVGVPSLYQVPHLEISKPNSKKRSNCLSLSLDKPFFTPLSLVRRTRRIHSSSLLVPS 60
Query: 59 AIATPNXXXXXXXXDQAFRGIAQNNND--DDSGNGFLSDSPTADELDVTKLGLPPRLVES 116
A+ATPN ++AF+ + +++D D G+ ++ +EL ++KL LP RL ES
Sbjct: 61 AVATPNSVLS----EEAFKSLGLSDHDEYDLDGDNNNVEADDGEELAISKLSLPQRLEES 116
Query: 117 LHNRSITHLFPIQRAVLIPALEGRDIIARAKTGTGKTLAFGIPIIKHITEDEHAVSHRRS 176
L R ITHLFPIQRAVL+PAL+GRDIIARAKTGTGKTLAFGIPIIK +TE+ + R
Sbjct: 117 LEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRLTEEAGDYTAFRR 176
Query: 177 AGRLPRVLVLAPTRELARQVEKEIKESAPYLSTVCVYGGVSYVTQQSALTRGVDVVVGTP 236
+GRLP+ LVLAPTRELA+QVEKEIKESAPYLSTVCVYGGVSY QQSALTRGVDVVVGTP
Sbjct: 177 SGRLPKFLVLAPTRELAKQVEKEIKESAPYLSTVCVYGGVSYTIQQSALTRGVDVVVGTP 236
Query: 237 GRIIDLINGNSLKLSEVQYLVLDEADQMLAVGFEEDVETILETVPSQRQTMLFSATMPGW 296
GRIIDLI G SLKL EV+YLVLDEADQMLAVGFEE VE+ILE +P++RQ+MLFSATMP W
Sbjct: 237 GRIIDLIEGRSLKLGEVEYLVLDEADQMLAVGFEEAVESILENLPTKRQSMLFSATMPTW 296
Query: 297 VKKLSRKYLNNPLTIDLVGDEEEKLAEGIKLYALSATSTSKRTILTDLITVYAKGGKTIV 356
VKKL+RKYL+NPL IDLVGD++EKLAEGIKLYA++ TSTSKRTIL+DLITVYAKGGKTIV
Sbjct: 297 VKKLARKYLDNPLNIDLVGDQDEKLAEGIKLYAIATTSTSKRTILSDLITVYAKGGKTIV 356
Query: 357 FTQTKRDADEVSLALTSSITSEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDI 416
FTQTKRDADEVSLAL++SI +EALHGDISQHQRERTLN FRQGKFTVLVATDVA+RGLDI
Sbjct: 357 FTQTKRDADEVSLALSNSIATEALHGDISQHQRERTLNAFRQGKFTVLVATDVASRGLDI 416
Query: 417 PNVDLIIHYELPNDPETFVHRSGRTGRAGKLGNAILMYTNSQRRTVRSLERDVGCKFEFV 476
PNVDL+IHYELPNDPETFVHRSGRTGRAGK G+AILM+T+SQ+RTVRSLERDVGC FEF+
Sbjct: 417 PNVDLVIHYELPNDPETFVHRSGRTGRAGKEGSAILMHTSSQKRTVRSLERDVGCHFEFI 476
Query: 477 NPPAMEEVLAASADQVVATLNGVHPESIEFFTPTAQKLIEEQGTSXXXXXXXHLSGFSKP 536
+PP + ++L +SADQVVATLNGVHP+SI+FF+ TAQKL EE+GT HLSGFS+P
Sbjct: 477 SPPTVGDLLESSADQVVATLNGVHPDSIKFFSATAQKLYEEKGTDALAAALAHLSGFSQP 536
Query: 537 PSSRSLITHEQGWXXXXXXXXXXXXRRYFSARNVTGFLSDVYSTAADEIGKIHLLADERV 596
PSSRSL++HE+GW R + SAR+VTGFLSD+Y TAADE+GKI L+AD+R+
Sbjct: 537 PSSRSLLSHEKGWVTLQLIRDPTNARGFLSARSVTGFLSDLYRTAADEVGKIFLIADDRI 596
Query: 597 QGAVFDLPEEIAKELLNKDVPAGHTISKITKLPPLQDDGPASDFY 641
QGAVFDLPEEIAKELL KDVP G+++S ITKLPPLQDDGP+SD Y
Sbjct: 597 QGAVFDLPEEIAKELLEKDVPEGNSLSMITKLPPLQDDGPSSDNY 641
>AT5G26742.1 | Symbols: emb1138 | DEAD box RNA helicase (RH3) |
chr5:9285540-9288871 REVERSE LENGTH=747
Length = 747
Score = 889 bits (2296), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 449/645 (69%), Positives = 527/645 (81%), Gaps = 11/645 (1%)
Query: 4 ITTVVGVSSAYQPPSLK--RPTTATISPSPASVKLLPCLVDTTKVSRSIR-HPT--FVPS 58
+ + VGV S YQ P L+ +P + S + P + V R+ R H + VPS
Sbjct: 1 MASTVGVPSLYQVPHLEISKPNSKKRSNCLSLSLDKPFFTPLSLVRRTRRIHSSSLLVPS 60
Query: 59 AIATPNXXXXXXXXDQAFRGIAQNNND--DDSGNGFLSDSPTADELDVTKLGLPPRLVES 116
A+ATPN ++AF+ + +++D D G+ ++ +EL ++KL LP RL ES
Sbjct: 61 AVATPNSVLS----EEAFKSLGLSDHDEYDLDGDNNNVEADDGEELAISKLSLPQRLEES 116
Query: 117 LHNRSITHLFPIQRAVLIPALEGRDIIARAKTGTGKTLAFGIPIIKHITEDEHAVSHRRS 176
L R ITHLFPIQRAVL+PAL+GRDIIARAKTGTGKTLAFGIPIIK +TE+ + R
Sbjct: 117 LEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRLTEEAGDYTAFRR 176
Query: 177 AGRLPRVLVLAPTRELARQVEKEIKESAPYLSTVCVYGGVSYVTQQSALTRGVDVVVGTP 236
+GRLP+ LVLAPTRELA+QVEKEIKESAPYLSTVCVYGGVSY QQSALTRGVDVVVGTP
Sbjct: 177 SGRLPKFLVLAPTRELAKQVEKEIKESAPYLSTVCVYGGVSYTIQQSALTRGVDVVVGTP 236
Query: 237 GRIIDLINGNSLKLSEVQYLVLDEADQMLAVGFEEDVETILETVPSQRQTMLFSATMPGW 296
GRIIDLI G SLKL EV+YLVLDEADQMLAVGFEE VE+ILE +P++RQ+MLFSATMP W
Sbjct: 237 GRIIDLIEGRSLKLGEVEYLVLDEADQMLAVGFEEAVESILENLPTKRQSMLFSATMPTW 296
Query: 297 VKKLSRKYLNNPLTIDLVGDEEEKLAEGIKLYALSATSTSKRTILTDLITVYAKGGKTIV 356
VKKL+RKYL+NPL IDLVGD++EKLAEGIKLYA++ TSTSKRTIL+DLITVYAKGGKTIV
Sbjct: 297 VKKLARKYLDNPLNIDLVGDQDEKLAEGIKLYAIATTSTSKRTILSDLITVYAKGGKTIV 356
Query: 357 FTQTKRDADEVSLALTSSITSEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDI 416
FTQTKRDADEVSLAL++SI +EALHGDISQHQRERTLN FRQGKFTVLVATDVA+RGLDI
Sbjct: 357 FTQTKRDADEVSLALSNSIATEALHGDISQHQRERTLNAFRQGKFTVLVATDVASRGLDI 416
Query: 417 PNVDLIIHYELPNDPETFVHRSGRTGRAGKLGNAILMYTNSQRRTVRSLERDVGCKFEFV 476
PNVDL+IHYELPNDPETFVHRSGRTGRAGK G+AILM+T+SQ+RTVRSLERDVGC FEF+
Sbjct: 417 PNVDLVIHYELPNDPETFVHRSGRTGRAGKEGSAILMHTSSQKRTVRSLERDVGCHFEFI 476
Query: 477 NPPAMEEVLAASADQVVATLNGVHPESIEFFTPTAQKLIEEQGTSXXXXXXXHLSGFSKP 536
+PP + ++L +SADQVVATLNGVHP+SI+FF+ TAQKL EE+GT HLSGFS+P
Sbjct: 477 SPPTVGDLLESSADQVVATLNGVHPDSIKFFSATAQKLYEEKGTDALAAALAHLSGFSQP 536
Query: 537 PSSRSLITHEQGWXXXXXXXXXXXXRRYFSARNVTGFLSDVYSTAADEIGKIHLLADERV 596
PSSRSL++HE+GW R + SAR+VTGFLSD+Y TAADE+GKI L+AD+R+
Sbjct: 537 PSSRSLLSHEKGWVTLQLIRDPTNARGFLSARSVTGFLSDLYRTAADEVGKIFLIADDRI 596
Query: 597 QGAVFDLPEEIAKELLNKDVPAGHTISKITKLPPLQDDGPASDFY 641
QGAVFDLPEEIAKELL KDVP G+++S ITKLPPLQDDGP+SD Y
Sbjct: 597 QGAVFDLPEEIAKELLEKDVPEGNSLSMITKLPPLQDDGPSSDNY 641
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 26/40 (65%)
Query: 725 LIGGXXXXXXXXXDRAGFGGACFSCGESGHRASDCPNKLG 764
LIGG R FGG+CF CG+SGHRA+DCP+K G
Sbjct: 707 LIGGRSSSSSRAPSRESFGGSCFICGKSGHRATDCPDKRG 746
>AT5G26742.3 | Symbols: emb1138 | DEAD box RNA helicase (RH3) |
chr5:9285540-9288618 REVERSE LENGTH=655
Length = 655
Score = 828 bits (2140), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/512 (78%), Positives = 456/512 (89%)
Query: 130 RAVLIPALEGRDIIARAKTGTGKTLAFGIPIIKHITEDEHAVSHRRSAGRLPRVLVLAPT 189
RAVL+PAL+GRDIIARAKTGTGKTLAFGIPIIK +TE+ + R +GRLP+ LVLAPT
Sbjct: 37 RAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRLTEEAGDYTAFRRSGRLPKFLVLAPT 96
Query: 190 RELARQVEKEIKESAPYLSTVCVYGGVSYVTQQSALTRGVDVVVGTPGRIIDLINGNSLK 249
RELA+QVEKEIKESAPYLSTVCVYGGVSY QQSALTRGVDVVVGTPGRIIDLI G SLK
Sbjct: 97 RELAKQVEKEIKESAPYLSTVCVYGGVSYTIQQSALTRGVDVVVGTPGRIIDLIEGRSLK 156
Query: 250 LSEVQYLVLDEADQMLAVGFEEDVETILETVPSQRQTMLFSATMPGWVKKLSRKYLNNPL 309
L EV+YLVLDEADQMLAVGFEE VE+ILE +P++RQ+MLFSATMP WVKKL+RKYL+NPL
Sbjct: 157 LGEVEYLVLDEADQMLAVGFEEAVESILENLPTKRQSMLFSATMPTWVKKLARKYLDNPL 216
Query: 310 TIDLVGDEEEKLAEGIKLYALSATSTSKRTILTDLITVYAKGGKTIVFTQTKRDADEVSL 369
IDLVGD++EKLAEGIKLYA++ TSTSKRTIL+DLITVYAKGGKTIVFTQTKRDADEVSL
Sbjct: 217 NIDLVGDQDEKLAEGIKLYAIATTSTSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSL 276
Query: 370 ALTSSITSEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPN 429
AL++SI +EALHGDISQHQRERTLN FRQGKFTVLVATDVA+RGLDIPNVDL+IHYELPN
Sbjct: 277 ALSNSIATEALHGDISQHQRERTLNAFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPN 336
Query: 430 DPETFVHRSGRTGRAGKLGNAILMYTNSQRRTVRSLERDVGCKFEFVNPPAMEEVLAASA 489
DPETFVHRSGRTGRAGK G+AILM+T+SQ+RTVRSLERDVGC FEF++PP + ++L +SA
Sbjct: 337 DPETFVHRSGRTGRAGKEGSAILMHTSSQKRTVRSLERDVGCHFEFISPPTVGDLLESSA 396
Query: 490 DQVVATLNGVHPESIEFFTPTAQKLIEEQGTSXXXXXXXHLSGFSKPPSSRSLITHEQGW 549
DQVVATLNGVHP+SI+FF+ TAQKL EE+GT HLSGFS+PPSSRSL++HE+GW
Sbjct: 397 DQVVATLNGVHPDSIKFFSATAQKLYEEKGTDALAAALAHLSGFSQPPSSRSLLSHEKGW 456
Query: 550 XXXXXXXXXXXXRRYFSARNVTGFLSDVYSTAADEIGKIHLLADERVQGAVFDLPEEIAK 609
R + SAR+VTGFLSD+Y TAADE+GKI L+AD+R+QGAVFDLPEEIAK
Sbjct: 457 VTLQLIRDPTNARGFLSARSVTGFLSDLYRTAADEVGKIFLIADDRIQGAVFDLPEEIAK 516
Query: 610 ELLNKDVPAGHTISKITKLPPLQDDGPASDFY 641
ELL KDVP G+++S ITKLPPLQDDGP+SD Y
Sbjct: 517 ELLEKDVPEGNSLSMITKLPPLQDDGPSSDNY 548
>AT3G22330.1 | Symbols: PMH2, ATRH53 | putative mitochondrial RNA
helicase 2 | chr3:7892641-7895145 FORWARD LENGTH=616
Length = 616
Score = 494 bits (1272), Expect = e-140, Method: Compositional matrix adjust.
Identities = 243/389 (62%), Positives = 300/389 (77%), Gaps = 4/389 (1%)
Query: 94 SDSPTADELDVTKLGLPPRLVESLHNRSITHLFPIQRAVLIPALEGRDIIARAKTGTGKT 153
S+S D L +++LG+ P +V++L ++ I LFPIQ+AVL PA+EGRD+I RA+TGTGKT
Sbjct: 96 SESVGGDGLAISELGISPEIVKALSSKGIEKLFPIQKAVLEPAMEGRDMIGRARTGTGKT 155
Query: 154 LAFGIPIIKHITEDEHAVSHRRSAGRLPRVLVLAPTRELARQVEKEIKESAPYLSTVCVY 213
LAFGIPII I + + H R GR P LVLAPTRELARQVEKE +ESAP L T+C+Y
Sbjct: 156 LAFGIPIIDKIIK--YNAKHGR--GRNPLCLVLAPTRELARQVEKEFRESAPSLDTICLY 211
Query: 214 GGVSYVTQQSALTRGVDVVVGTPGRIIDLINGNSLKLSEVQYLVLDEADQMLAVGFEEDV 273
GG Q L GVDV VGTPGR+IDL+ +L LSEVQ++VLDEADQML VGF EDV
Sbjct: 212 GGTPIGQQMRQLDYGVDVAVGTPGRVIDLMKRGALNLSEVQFVVLDEADQMLQVGFAEDV 271
Query: 274 ETILETVPSQRQTMLFSATMPGWVKKLSRKYLNNPLTIDLVGDEEEKLAEGIKLYALSAT 333
E ILE +P +RQ+M+FSATMP W++ L++KYLNNPLT+DLVGD ++KLA+GI Y++ A
Sbjct: 272 EIILEKLPEKRQSMMFSATMPSWIRSLTKKYLNNPLTVDLVGDSDQKLADGITTYSIIAD 331
Query: 334 STSKRTILTDLITVYAKGGKTIVFTQTKRDADEVSLALTSSITSEALHGDISQHQRERTL 393
S + +I+ L+T +AKGGK IVFTQTKRDAD +S AL S EALHGDISQ QRERTL
Sbjct: 332 SYGRASIIGPLVTEHAKGGKCIVFTQTKRDADRLSYALARSFKCEALHGDISQSQRERTL 391
Query: 394 NGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKLGNAILM 453
GFR G F +LVATDVAARGLD+PNVDLIIHYELPN+ ETFVHR+GRTGRAGK G+AIL+
Sbjct: 392 AGFRDGHFNILVATDVAARGLDVPNVDLIIHYELPNNTETFVHRTGRTGRAGKKGSAILI 451
Query: 454 YTNSQRRTVRSLERDVGCKFEFVNPPAME 482
Y+ Q R V+ +ER+VG +F + A+E
Sbjct: 452 YSQDQSRAVKIIEREVGSRFTELPSIAVE 480
>AT3G22310.1 | Symbols: PMH1, ATRH9 | putative mitochondrial RNA
helicase 1 | chr3:7887382-7889806 FORWARD LENGTH=610
Length = 610
Score = 484 bits (1246), Expect = e-137, Method: Compositional matrix adjust.
Identities = 231/381 (60%), Positives = 293/381 (76%), Gaps = 4/381 (1%)
Query: 102 LDVTKLGLPPRLVESLHNRSITHLFPIQRAVLIPALEGRDIIARAKTGTGKTLAFGIPII 161
L + LG+ P +V++L R I LFPIQ+AVL PA+EGRD+I RA+TGTGKTLAFGIPII
Sbjct: 116 LAIADLGISPEIVKALKGRGIEKLFPIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIPII 175
Query: 162 KHITEDEHAVSHRRSAGRLPRVLVLAPTRELARQVEKEIKESAPYLSTVCVYGGVSYVTQ 221
I + + + G+ P+ LVLAPTRELARQVEKE +ESAP L T+C+YGG Q
Sbjct: 176 DKIIK----FNAKHGRGKNPQCLVLAPTRELARQVEKEFRESAPSLDTICLYGGTPIGQQ 231
Query: 222 QSALTRGVDVVVGTPGRIIDLINGNSLKLSEVQYLVLDEADQMLAVGFEEDVETILETVP 281
L G+DV VGTPGRIIDL+ +L LSEVQ++VLDEADQML VGF EDVE IL+ +P
Sbjct: 232 MRELNYGIDVAVGTPGRIIDLMKRGALNLSEVQFVVLDEADQMLQVGFAEDVEIILQKLP 291
Query: 282 SQRQTMLFSATMPGWVKKLSRKYLNNPLTIDLVGDEEEKLAEGIKLYALSATSTSKRTIL 341
++RQ+M+FSATMP W++ L++KYLNNPLTIDLVGD ++KLA+GI +Y+++A S + +I+
Sbjct: 292 AKRQSMMFSATMPSWIRSLTKKYLNNPLTIDLVGDSDQKLADGITMYSIAADSYGRASII 351
Query: 342 TDLITVYAKGGKTIVFTQTKRDADEVSLALTSSITSEALHGDISQHQRERTLNGFRQGKF 401
L+ + KGGK IVFTQTKRDAD ++ L S EALHGDISQ QRERTL GFR G F
Sbjct: 352 GPLVKEHGKGGKCIVFTQTKRDADRLAFGLAKSYKCEALHGDISQAQRERTLAGFRDGNF 411
Query: 402 TVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKLGNAILMYTNSQRRT 461
++LVATDVAARGLD+PNVDL+IHYELPN+ ETFVHR+GRTGRAGK G+AIL++ Q R
Sbjct: 412 SILVATDVAARGLDVPNVDLVIHYELPNNTETFVHRTGRTGRAGKKGSAILIHGQDQTRA 471
Query: 462 VRSLERDVGCKFEFVNPPAME 482
V+ +E++VG +F + A+E
Sbjct: 472 VKMIEKEVGSRFNELPSIAVE 492
>AT5G62190.1 | Symbols: PRH75 | DEAD box RNA helicase (PRH75) |
chr5:24980542-24983879 REVERSE LENGTH=671
Length = 671
Score = 337 bits (864), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 216/553 (39%), Positives = 311/553 (56%), Gaps = 26/553 (4%)
Query: 95 DSPTADELDVTKLGLPPRLVESLHNRSITHLFPIQRAVLIPALEGRDIIARAKTGTGKTL 154
D+P A V+K + L E L I LFPIQ + L+G D++ RA+TG GKTL
Sbjct: 93 DNPNA----VSKFRISAPLREKLKANGIEALFPIQASTFDMVLDGADLVGRARTGQGKTL 148
Query: 155 AFGIPIIKHITEDEHAVSHRRSAGRLPRVLVLAPTRELARQVEKEIKE--SAPYLSTVCV 212
AF +PI++ + + GR P VLVL PTRELA+QV + + LS+ C+
Sbjct: 149 AFVLPILESLVNGPAKSKRKMGYGRSPSVLVLLPTRELAKQVAADFDAYGGSLGLSSCCL 208
Query: 213 YGGVSYVTQQSALTRGVDVVVGTPGRIIDLINGNSLKLSEVQYLVLDEADQMLAVGFEED 272
YGG SY Q+ L RGVD+VVGTPGRI D I +L S +Q+ VLDEAD+ML +GF ED
Sbjct: 209 YGGDSYPVQEGKLKRGVDIVVGTPGRIKDHIERQNLDFSYLQFRVLDEADEMLRMGFVED 268
Query: 273 VETILETV--PSQRQTMLFSATMPGWVKKLSRKYLN-NPLTIDLVGDEEEKLAEGIKLYA 329
VE IL V ++ QT+LFSAT+P WVK +S ++L + TIDLVG+++ K + ++ A
Sbjct: 269 VELILGKVEDSTKVQTLLFSATLPSWVKNISNRFLKRDQKTIDLVGNDKMKASNSVRHIA 328
Query: 330 LSATSTSKRTILTDLITVYAKGGKTIVFTQTKRDADEVSLALTSSITSEALHGDISQHQR 389
+ + ++ D+I+ Y+ GG+TI+F +TK E+S L S ALHG+I Q QR
Sbjct: 329 IPCNKAAMARLIPDIISCYSSGGQTIIFAETKVQVSELSGLLDGS---RALHGEIPQSQR 385
Query: 390 ERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKLGN 449
E TL GFR GKF LVAT+VAARGLDI +V LII E P + E ++HRSGRTGRAG G
Sbjct: 386 EVTLAGFRNGKFATLVATNVAARGLDINDVQLIIQCEPPREVEAYIHRSGRTGRAGNTGV 445
Query: 450 AILMYTNSQRRTVRSLERDVGCKFEFVNPPAMEEVLAASADQVVATLNGVHPESIEFFTP 509
A+ +Y +S++ +V +E++ G KFE + P +E+ + + + V + F
Sbjct: 446 AVTLY-DSRKSSVSRIEKEAGIKFEHLAAPQPDEIARSGGMEAAEKVKQVCDSVVPAFLE 504
Query: 510 TAQKLIEEQGTSXXXXXXXHL---SGFSKPPSSRSLITHEQGWXXXXXXXXXXXXRRYFS 566
A++L+E G S L +GF++ RSL+T + + + +S
Sbjct: 505 AAKELLETSGLSAEVLLAKALAKTAGFTE-IKKRSLLTSMENY----VTLHLEAGKPIYS 559
Query: 567 ARNVTGFLSDVY-STAADEIGKIHLLADERVQGAVFDLPE-EIAKELLNKDVPAGHTISK 624
V G L V + I + L AD+ GAVFD+ + ++ + AG +
Sbjct: 560 PSFVYGLLRRVLPDDKVEMIEGLSLTADK--TGAVFDVKQSDLDLFIAGAQKSAGSMSLE 617
Query: 625 ITK-LPPLQDDGP 636
+ K +P LQ+ P
Sbjct: 618 VVKVMPKLQEREP 630
>AT3G01540.1 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 |
chr3:213077-216142 REVERSE LENGTH=618
Length = 618
Score = 256 bits (654), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 137/350 (39%), Positives = 207/350 (59%), Gaps = 10/350 (2%)
Query: 108 GLPPRLVESLHNRSITHLFPIQRAVLIPALEGRDIIARAKTGTGKTLAFGIPIIKHITED 167
G PP L+ + + + PIQ A++GRDI+A AKTG+GKTL + IP H+
Sbjct: 164 GFPPELLREVLSAGFSAPTPIQAQSWPIAMQGRDIVAIAKTGSGKTLGYLIPGFLHL--- 220
Query: 168 EHAVSHRRSAGRL-PRVLVLAPTRELARQVEKEIKE--SAPYLSTVCVYGGVSYVTQQSA 224
R+ R+ P +LVL+PTRELA Q+++E + + +S C+YGG Q
Sbjct: 221 ----QRIRNDSRMGPTILVLSPTRELATQIQEEAVKFGRSSRISCTCLYGGAPKGPQLRD 276
Query: 225 LTRGVDVVVGTPGRIIDLINGNSLKLSEVQYLVLDEADQMLAVGFEEDVETILETVPSQR 284
L RG D+VV TPGR+ D++ + L ++ YLVLDEAD+ML +GFE + I++ +P++R
Sbjct: 277 LERGADIVVATPGRLNDILEMRRISLRQISYLVLDEADRMLDMGFEPQIRKIVKEIPTKR 336
Query: 285 QTMLFSATMPGWVKKLSRKYLNNPLTIDLVGDEEEKLAEGIKLYALSATSTSKRTILTDL 344
QT++++AT P V+K++ L NP +++ +E + I + K+ L +
Sbjct: 337 QTLMYTATWPKGVRKIAADLLVNPAQVNIGNVDELVANKSITQHIEVVAPMEKQRRLEQI 396
Query: 345 ITVYAKGGKTIVFTQTKRDADEVSLALTSSITSEALHGDISQHQRERTLNGFRQGKFTVL 404
+ G K I+F TKR D+++ LT + A+HGD SQ +R+ LN FR G+ VL
Sbjct: 397 LRSQEPGSKVIIFCSTKRMCDQLTRNLTRQFGAAAIHGDKSQPERDNVLNQFRSGRTPVL 456
Query: 405 VATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKLGNAILMY 454
VATDVAARGLD+ ++ +++Y+ PN E +VHR GRTGRAG G A +
Sbjct: 457 VATDVAARGLDVKDIRAVVNYDFPNGVEDYVHRIGRTGRAGATGQAFTFF 506
>AT3G01540.4 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 |
chr3:213077-216142 REVERSE LENGTH=619
Length = 619
Score = 256 bits (654), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 137/350 (39%), Positives = 207/350 (59%), Gaps = 10/350 (2%)
Query: 108 GLPPRLVESLHNRSITHLFPIQRAVLIPALEGRDIIARAKTGTGKTLAFGIPIIKHITED 167
G PP L+ + + + PIQ A++GRDI+A AKTG+GKTL + IP H+
Sbjct: 164 GFPPELLREVLSAGFSAPTPIQAQSWPIAMQGRDIVAIAKTGSGKTLGYLIPGFLHL--- 220
Query: 168 EHAVSHRRSAGRL-PRVLVLAPTRELARQVEKEIKE--SAPYLSTVCVYGGVSYVTQQSA 224
R+ R+ P +LVL+PTRELA Q+++E + + +S C+YGG Q
Sbjct: 221 ----QRIRNDSRMGPTILVLSPTRELATQIQEEAVKFGRSSRISCTCLYGGAPKGPQLRD 276
Query: 225 LTRGVDVVVGTPGRIIDLINGNSLKLSEVQYLVLDEADQMLAVGFEEDVETILETVPSQR 284
L RG D+VV TPGR+ D++ + L ++ YLVLDEAD+ML +GFE + I++ +P++R
Sbjct: 277 LERGADIVVATPGRLNDILEMRRISLRQISYLVLDEADRMLDMGFEPQIRKIVKEIPTKR 336
Query: 285 QTMLFSATMPGWVKKLSRKYLNNPLTIDLVGDEEEKLAEGIKLYALSATSTSKRTILTDL 344
QT++++AT P V+K++ L NP +++ +E + I + K+ L +
Sbjct: 337 QTLMYTATWPKGVRKIAADLLVNPAQVNIGNVDELVANKSITQHIEVVAPMEKQRRLEQI 396
Query: 345 ITVYAKGGKTIVFTQTKRDADEVSLALTSSITSEALHGDISQHQRERTLNGFRQGKFTVL 404
+ G K I+F TKR D+++ LT + A+HGD SQ +R+ LN FR G+ VL
Sbjct: 397 LRSQEPGSKVIIFCSTKRMCDQLTRNLTRQFGAAAIHGDKSQPERDNVLNQFRSGRTPVL 456
Query: 405 VATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKLGNAILMY 454
VATDVAARGLD+ ++ +++Y+ PN E +VHR GRTGRAG G A +
Sbjct: 457 VATDVAARGLDVKDIRAVVNYDFPNGVEDYVHRIGRTGRAGATGQAFTFF 506
>AT3G01540.3 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 |
chr3:213077-216142 REVERSE LENGTH=619
Length = 619
Score = 256 bits (654), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 137/350 (39%), Positives = 207/350 (59%), Gaps = 10/350 (2%)
Query: 108 GLPPRLVESLHNRSITHLFPIQRAVLIPALEGRDIIARAKTGTGKTLAFGIPIIKHITED 167
G PP L+ + + + PIQ A++GRDI+A AKTG+GKTL + IP H+
Sbjct: 164 GFPPELLREVLSAGFSAPTPIQAQSWPIAMQGRDIVAIAKTGSGKTLGYLIPGFLHL--- 220
Query: 168 EHAVSHRRSAGRL-PRVLVLAPTRELARQVEKEIKE--SAPYLSTVCVYGGVSYVTQQSA 224
R+ R+ P +LVL+PTRELA Q+++E + + +S C+YGG Q
Sbjct: 221 ----QRIRNDSRMGPTILVLSPTRELATQIQEEAVKFGRSSRISCTCLYGGAPKGPQLRD 276
Query: 225 LTRGVDVVVGTPGRIIDLINGNSLKLSEVQYLVLDEADQMLAVGFEEDVETILETVPSQR 284
L RG D+VV TPGR+ D++ + L ++ YLVLDEAD+ML +GFE + I++ +P++R
Sbjct: 277 LERGADIVVATPGRLNDILEMRRISLRQISYLVLDEADRMLDMGFEPQIRKIVKEIPTKR 336
Query: 285 QTMLFSATMPGWVKKLSRKYLNNPLTIDLVGDEEEKLAEGIKLYALSATSTSKRTILTDL 344
QT++++AT P V+K++ L NP +++ +E + I + K+ L +
Sbjct: 337 QTLMYTATWPKGVRKIAADLLVNPAQVNIGNVDELVANKSITQHIEVVAPMEKQRRLEQI 396
Query: 345 ITVYAKGGKTIVFTQTKRDADEVSLALTSSITSEALHGDISQHQRERTLNGFRQGKFTVL 404
+ G K I+F TKR D+++ LT + A+HGD SQ +R+ LN FR G+ VL
Sbjct: 397 LRSQEPGSKVIIFCSTKRMCDQLTRNLTRQFGAAAIHGDKSQPERDNVLNQFRSGRTPVL 456
Query: 405 VATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKLGNAILMY 454
VATDVAARGLD+ ++ +++Y+ PN E +VHR GRTGRAG G A +
Sbjct: 457 VATDVAARGLDVKDIRAVVNYDFPNGVEDYVHRIGRTGRAGATGQAFTFF 506
>AT3G01540.2 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 |
chr3:213077-216142 REVERSE LENGTH=619
Length = 619
Score = 256 bits (654), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 137/350 (39%), Positives = 207/350 (59%), Gaps = 10/350 (2%)
Query: 108 GLPPRLVESLHNRSITHLFPIQRAVLIPALEGRDIIARAKTGTGKTLAFGIPIIKHITED 167
G PP L+ + + + PIQ A++GRDI+A AKTG+GKTL + IP H+
Sbjct: 164 GFPPELLREVLSAGFSAPTPIQAQSWPIAMQGRDIVAIAKTGSGKTLGYLIPGFLHL--- 220
Query: 168 EHAVSHRRSAGRL-PRVLVLAPTRELARQVEKEIKE--SAPYLSTVCVYGGVSYVTQQSA 224
R+ R+ P +LVL+PTRELA Q+++E + + +S C+YGG Q
Sbjct: 221 ----QRIRNDSRMGPTILVLSPTRELATQIQEEAVKFGRSSRISCTCLYGGAPKGPQLRD 276
Query: 225 LTRGVDVVVGTPGRIIDLINGNSLKLSEVQYLVLDEADQMLAVGFEEDVETILETVPSQR 284
L RG D+VV TPGR+ D++ + L ++ YLVLDEAD+ML +GFE + I++ +P++R
Sbjct: 277 LERGADIVVATPGRLNDILEMRRISLRQISYLVLDEADRMLDMGFEPQIRKIVKEIPTKR 336
Query: 285 QTMLFSATMPGWVKKLSRKYLNNPLTIDLVGDEEEKLAEGIKLYALSATSTSKRTILTDL 344
QT++++AT P V+K++ L NP +++ +E + I + K+ L +
Sbjct: 337 QTLMYTATWPKGVRKIAADLLVNPAQVNIGNVDELVANKSITQHIEVVAPMEKQRRLEQI 396
Query: 345 ITVYAKGGKTIVFTQTKRDADEVSLALTSSITSEALHGDISQHQRERTLNGFRQGKFTVL 404
+ G K I+F TKR D+++ LT + A+HGD SQ +R+ LN FR G+ VL
Sbjct: 397 LRSQEPGSKVIIFCSTKRMCDQLTRNLTRQFGAAAIHGDKSQPERDNVLNQFRSGRTPVL 456
Query: 405 VATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKLGNAILMY 454
VATDVAARGLD+ ++ +++Y+ PN E +VHR GRTGRAG G A +
Sbjct: 457 VATDVAARGLDVKDIRAVVNYDFPNGVEDYVHRIGRTGRAGATGQAFTFF 506
>AT1G55150.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:20574634-20577141 FORWARD LENGTH=501
Length = 501
Score = 253 bits (645), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 140/362 (38%), Positives = 214/362 (59%), Gaps = 9/362 (2%)
Query: 107 LGLPPRLVESLHNRSITHLFPIQRAVLIPALEGRDIIARAKTGTGKTLAFGIPIIKHITE 166
+G P ++E + T PIQ A++GRD+I A+TG+GKTL++ +P I H+
Sbjct: 104 VGFPDYVLEEVKKAGFTEPTPIQSQGWPMAMKGRDLIGIAETGSGKTLSYLLPAIVHVNA 163
Query: 167 DEHAVSHRRSAGRLPRVLVLAPTRELARQVEKEIKE--SAPYLSTVCVYGGVSYVTQQSA 224
+ ++H G P VLVLAPTRELA Q+++E + S+ + T C+YGGV Q
Sbjct: 164 -QPMLAH----GDGPIVLVLAPTRELAVQIQQEASKFGSSSKIKTTCIYGGVPKGPQVRD 218
Query: 225 LTRGVDVVVGTPGRIIDLINGNSLKLSEVQYLVLDEADQMLAVGFEEDVETILETVPSQR 284
L +GV++V+ TPGR+ID++ N+ L V YLVLDEAD+ML +GF+ + I+ + R
Sbjct: 219 LQKGVEIVIATPGRLIDMMESNNTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSHIRPDR 278
Query: 285 QTMLFSATMPGWVKKLSRKYLNNPLTIDLVGDEEEKLAEGIKLYALSATSTSKRTILTDL 344
QT+ +SAT P V++LS+K+L NP + ++G + K I+ + + K L L
Sbjct: 279 QTLYWSATWPKEVEQLSKKFLYNPYKV-IIGSSDLKANRAIRQIVDVISESQKYNKLVKL 337
Query: 345 ITVYAKGGKTIVFTQTKRDADEVSLAL-TSSITSEALHGDISQHQRERTLNGFRQGKFTV 403
+ G + +VF TK+ D+++ L + ++HGD SQ +R+ L+ FR GK +
Sbjct: 338 LEDIMDGSRILVFLDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPI 397
Query: 404 LVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKLGNAILMYTNSQRRTVR 463
+ ATDVAARGLD+ +V +I+Y+ P E +VHR GRTGRAG G A +T + R +
Sbjct: 398 MTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTVANARFAK 457
Query: 464 SL 465
L
Sbjct: 458 EL 459
>AT5G14610.2 | Symbols: | DEAD box RNA helicase family protein |
chr5:4711271-4714713 FORWARD LENGTH=645
Length = 645
Score = 251 bits (640), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 137/349 (39%), Positives = 206/349 (59%), Gaps = 8/349 (2%)
Query: 108 GLPPRLVESLHNRSITHLFPIQRAVLIPALEGRDIIARAKTGTGKTLAFGIPIIKHITED 167
GLP L+ +++ + PIQ A++ RDI+A AKTG+GKTL + IP H+
Sbjct: 167 GLPNELLREVYSAGFSAPSPIQAQSWPIAMQNRDIVAIAKTGSGKTLGYLIPGFMHL--- 223
Query: 168 EHAVSHRRSAGRLPRVLVLAPTRELARQVEKEIKE--SAPYLSTVCVYGGVSYVTQQSAL 225
+ + G P +LVL+PTRELA Q++ E + + +S C+YGG Q +
Sbjct: 224 -QRIHNDSRMG--PTILVLSPTRELATQIQVEALKFGKSSKISCACLYGGAPKGPQLKEI 280
Query: 226 TRGVDVVVGTPGRIIDLINGNSLKLSEVQYLVLDEADQMLAVGFEEDVETILETVPSQRQ 285
RGVD+VV TPGR+ D++ + L +V YLVLDEAD+ML +GFE + I+ VP++RQ
Sbjct: 281 ERGVDIVVATPGRLNDILEMKRISLHQVSYLVLDEADRMLDMGFEPQIRKIVNEVPTKRQ 340
Query: 286 TMLFSATMPGWVKKLSRKYLNNPLTIDLVGDEEEKLAEGIKLYALSATSTSKRTILTDLI 345
T++++AT P V+K++ L NP +++ +E + I K + L ++
Sbjct: 341 TLMYTATWPKEVRKIAADLLVNPAQVNIGNVDELVANKSITQTIEVLAPMEKHSRLEQIL 400
Query: 346 TVYAKGGKTIVFTQTKRDADEVSLALTSSITSEALHGDISQHQRERTLNGFRQGKFTVLV 405
G K I+F TKR D+++ LT + + A+HGD SQ +R+ LN FR G+ VLV
Sbjct: 401 RSQEPGSKIIIFCSTKRMCDQLARNLTRTFGAAAIHGDKSQAERDDVLNQFRSGRTPVLV 460
Query: 406 ATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKLGNAILMY 454
ATDVAARGLD+ ++ ++++Y+ PN E +VHR GRTGRAG G A +
Sbjct: 461 ATDVAARGLDVKDIRVVVNYDFPNGVEDYVHRIGRTGRAGATGLAYTFF 509
>AT3G06480.1 | Symbols: | DEAD box RNA helicase family protein |
chr3:1985697-1989666 REVERSE LENGTH=1088
Length = 1088
Score = 247 bits (631), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 137/353 (38%), Positives = 201/353 (56%), Gaps = 14/353 (3%)
Query: 108 GLPPRLVESLHNRSITHLFPIQRAVLIPALEGRDIIARAKTGTGKTLAFGIP---IIKHI 164
GLPP ++ L + PIQ AL+ RDI+A AKTG+GKTL + IP +++H
Sbjct: 441 GLPPEILRELLSAGFPSPTPIQAQTWPIALQSRDIVAIAKTGSGKTLGYLIPAFILLRHC 500
Query: 165 TEDEHAVSHRRSAGRLPRVLVLAPTRELARQVEKEIKE--SAPYLSTVCVYGGVSYVTQQ 222
D R+ P VL+LAPTRELA Q++ E + +S C+YGG Q
Sbjct: 501 RNDS------RNG---PTVLILAPTRELATQIQDEALRFGRSSRISCTCLYGGAPKGPQL 551
Query: 223 SALTRGVDVVVGTPGRIIDLINGNSLKLSEVQYLVLDEADQMLAVGFEEDVETILETVPS 282
L RG D+VV TPGR+ D++ + +V LVLDEAD+ML +GFE + I+ +P
Sbjct: 552 KELERGADIVVATPGRLNDILEMKMIDFQQVSLLVLDEADRMLDMGFEPQIRKIVNEIPP 611
Query: 283 QRQTMLFSATMPGWVKKLSRKYLNNPLTIDLVGDEEEKLAEGIKLYALSATSTSKRTILT 342
+RQT++++AT P V+K++ L NP+ +++ +E + I Y K L
Sbjct: 612 RRQTLMYTATWPKEVRKIASDLLVNPVQVNIGRVDELAANKAITQYVEVVPQMEKERRLE 671
Query: 343 DLITVYAKGGKTIVFTQTKRDADEVSLALTSSITSEALHGDISQHQRERTLNGFRQGKFT 402
++ +G K I+F TKR D ++ ++ + +HGD +Q +R+ LN FR GK
Sbjct: 672 QILRSQERGSKVIIFCSTKRLCDHLARSVGRHFGAVVIHGDKTQGERDWVLNQFRSGKSC 731
Query: 403 VLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKLGNAILMYT 455
VL+ATDVAARGLDI ++ ++I+Y+ P E +VHR GRTGRAG G A +T
Sbjct: 732 VLIATDVAARGLDIKDIRVVINYDFPTGVEDYVHRIGRTGRAGATGVAFTFFT 784
>AT5G14610.1 | Symbols: | DEAD box RNA helicase family protein |
chr5:4711271-4714713 FORWARD LENGTH=712
Length = 712
Score = 245 bits (625), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 133/330 (40%), Positives = 197/330 (59%), Gaps = 8/330 (2%)
Query: 127 PIQRAVLIPALEGRDIIARAKTGTGKTLAFGIPIIKHITEDEHAVSHRRSAGRLPRVLVL 186
PIQ A++ RDI+A AKTG+GKTL + IP H+ + + G P +LVL
Sbjct: 254 PIQAQSWPIAMQNRDIVAIAKTGSGKTLGYLIPGFMHLQR----IHNDSRMG--PTILVL 307
Query: 187 APTRELARQVEKEIKE--SAPYLSTVCVYGGVSYVTQQSALTRGVDVVVGTPGRIIDLIN 244
+PTRELA Q++ E + + +S C+YGG Q + RGVD+VV TPGR+ D++
Sbjct: 308 SPTRELATQIQVEALKFGKSSKISCACLYGGAPKGPQLKEIERGVDIVVATPGRLNDILE 367
Query: 245 GNSLKLSEVQYLVLDEADQMLAVGFEEDVETILETVPSQRQTMLFSATMPGWVKKLSRKY 304
+ L +V YLVLDEAD+ML +GFE + I+ VP++RQT++++AT P V+K++
Sbjct: 368 MKRISLHQVSYLVLDEADRMLDMGFEPQIRKIVNEVPTKRQTLMYTATWPKEVRKIAADL 427
Query: 305 LNNPLTIDLVGDEEEKLAEGIKLYALSATSTSKRTILTDLITVYAKGGKTIVFTQTKRDA 364
L NP +++ +E + I K + L ++ G K I+F TKR
Sbjct: 428 LVNPAQVNIGNVDELVANKSITQTIEVLAPMEKHSRLEQILRSQEPGSKIIIFCSTKRMC 487
Query: 365 DEVSLALTSSITSEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIH 424
D+++ LT + + A+HGD SQ +R+ LN FR G+ VLVATDVAARGLD+ ++ ++++
Sbjct: 488 DQLARNLTRTFGAAAIHGDKSQAERDDVLNQFRSGRTPVLVATDVAARGLDVKDIRVVVN 547
Query: 425 YELPNDPETFVHRSGRTGRAGKLGNAILMY 454
Y+ PN E +VHR GRTGRAG G A +
Sbjct: 548 YDFPNGVEDYVHRIGRTGRAGATGLAYTFF 577
>AT5G63120.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:25318967-25322071
REVERSE LENGTH=591
Length = 591
Score = 241 bits (615), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 134/360 (37%), Positives = 206/360 (57%), Gaps = 9/360 (2%)
Query: 109 LPPRLVESLHNRSITHLFPIQRAVLIPALEGRDIIARAKTGTGKTLAFGIPIIKHITEDE 168
P ++E++ T PIQ AL+GRD+I A+TG+GKTLA+ +P + H++
Sbjct: 172 FPDNILEAIAKLGFTEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPALVHVS--- 228
Query: 169 HAVSHRRSAGRLPRVLVLAPTRELARQVEKEIKESA--PYLSTVCVYGGVSYVTQQSALT 226
R P VL+LAPTRELA Q+++E ++ + + C+YGG Q L
Sbjct: 229 --AQPRLGQDDGPIVLILAPTRELAVQIQEESRKFGLRSGVRSTCIYGGAPKGPQIRDLR 286
Query: 227 RGVDVVVGTPGRIIDLINGNSLKLSEVQYLVLDEADQMLAVGFEEDVETILETVPSQRQT 286
RGV++V+ TPGR+ID++ L V YLVLDEAD+ML +GFE + I+ + RQT
Sbjct: 287 RGVEIVIATPGRLIDMLECQHTNLKRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQT 346
Query: 287 MLFSATMPGWVKKLSRKYLNNPLTIDLVGDEEEKLAEGIKLYALSATSTSKRTILTDLIT 346
+L+SAT P V+ L+R++L +P ++G + K + I + K L L+
Sbjct: 347 LLWSATWPREVETLARQFLRDPYKA-IIGSTDLKANQSINQVIEIVPTPEKYNRLLTLLK 405
Query: 347 VYAKGGKTIVFTQTKRDADEVSLAL-TSSITSEALHGDISQHQRERTLNGFRQGKFTVLV 405
G K ++F +TKR D+V+ L + A+HGD +Q +R+R L F+ G+ ++
Sbjct: 406 QLMDGSKILIFVETKRGCDQVTRQLRMDGWPALAIHGDKTQSERDRVLAEFKSGRSPIMT 465
Query: 406 ATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKLGNAILMYTNSQRRTVRSL 465
ATDVAARGLD+ ++ +++Y+ PN E ++HR GRTGRAG G A +T+ + R L
Sbjct: 466 ATDVAARGLDVKDIKCVVNYDFPNTLEDYIHRIGRTGRAGAKGMAFTFFTHDNAKFAREL 525
>AT2G42520.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:17705382-17708744
FORWARD LENGTH=633
Length = 633
Score = 240 bits (613), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 140/354 (39%), Positives = 208/354 (58%), Gaps = 19/354 (5%)
Query: 127 PIQRAVLIPALEGRDIIARAKTGTGKTLAFGIPIIKHITEDEHAVSHRRSAGRLPRVLVL 186
P+QR + LEGRD++A A+TG+GKT AF PII I +D+H R S P ++L
Sbjct: 184 PVQRHAIPILLEGRDLMACAQTGSGKTAAFCFPIISGIMKDQHVQRPRGSRTVYPLAVIL 243
Query: 187 APTRELARQVEKEIKESAPY--LSTVCVYGGVSYVTQQSALTRGVDVVVGTPGRIIDLIN 244
+PTRELA Q+ E K+ + + V YGG Q L RGVD++V TPGR+ DL+
Sbjct: 244 SPTRELASQIHDEAKKFSYQTGVKVVVAYGGTPINQQLRELERGVDILVATPGRLNDLLE 303
Query: 245 GNSLKLSEVQYLVLDEADQMLAVGFEEDVETILETV--PSQ--RQTMLFSATMPGWVKKL 300
+ + +++L LDEAD+ML +GFE + I+E + P + RQT+LFSAT P +++L
Sbjct: 304 RARVSMQMIRFLALDEADRMLDMGFEPQIRKIVEQMDMPPRGVRQTLLFSATFPREIQRL 363
Query: 301 SRKYLNNP--LTIDLVGDEEEKLAEGIKLYALSATSTSKRTILTDLIT------VYAKGG 352
+ +L N L + VG + + + ++ + KR+ L DL+ + K
Sbjct: 364 AADFLANYIFLAVGRVGSSTDLIVQRVEF----VLDSDKRSHLMDLLHAQRENGIQGKQA 419
Query: 353 KTIVFTQTKRDADEVSLALT-SSITSEALHGDISQHQRERTLNGFRQGKFTVLVATDVAA 411
T+VF +TKR AD + L + + ++HGD +Q +RE L F+ G+ +LVATDVAA
Sbjct: 420 LTLVFVETKRGADSLENWLCINGFPATSIHGDRTQQEREVALKAFKSGRTPILVATDVAA 479
Query: 412 RGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKLGNAILMYTNSQRRTVRSL 465
RGLDIP+V +++++LPND + +VHR GRTGRAGK G A + + R L
Sbjct: 480 RGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNDGNTSLARPL 533
>AT3G58510.3 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:21640608-21643464 FORWARD LENGTH=612
Length = 612
Score = 237 bits (604), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 138/352 (39%), Positives = 207/352 (58%), Gaps = 17/352 (4%)
Query: 127 PIQRAVLIPALEGRDIIARAKTGTGKTLAFGIPIIKHITEDEHAVSHRRSAGRLPRVLVL 186
P+QR + L RD++A A+TG+GKT AF PII I +D+H R S P ++L
Sbjct: 176 PVQRHAIPILLAERDLMACAQTGSGKTAAFCFPIISGIMKDQHVERPRGSRAVYPFAVIL 235
Query: 187 APTRELARQVEKEIKESAPY--LSTVCVYGGVSYVTQQSALTRGVDVVVGTPGRIIDLIN 244
+PTRELA Q+ E K+ + + V YGG Q L RG D++V TPGR+ DL+
Sbjct: 236 SPTRELACQIHDEAKKFSYQTGVKVVVAYGGTPIHQQLRELERGCDILVATPGRLNDLLE 295
Query: 245 GNSLKLSEVQYLVLDEADQMLAVGFEEDVETILETV--PSQ--RQTMLFSATMPGWVKKL 300
+ + +++L LDEAD+ML +GFE + I+E + P + RQTMLFSAT P +++L
Sbjct: 296 RARVSMQMIRFLALDEADRMLDMGFEPQIRKIVEQMDMPPRGVRQTMLFSATFPSQIQRL 355
Query: 301 SRKYLNNP--LTIDLVGDEEEKLAEGIKLYALSATSTSKRTILTDLI----TVYAKGGKT 354
+ +++N L + VG + + + ++ + KR+ L DL+ K T
Sbjct: 356 AADFMSNYIFLAVGRVGSSTDLITQRVEF----VQESDKRSHLMDLLHAQRETQDKQSLT 411
Query: 355 IVFTQTKRDADEVSLALT-SSITSEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARG 413
+VF +TKR AD + L + + ++HGD +Q +RE L F+ G+ +LVATDVAARG
Sbjct: 412 LVFVETKRGADTLENWLCMNEFPATSIHGDRTQQEREVALRSFKTGRTPILVATDVAARG 471
Query: 414 LDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKLGNAILMYTNSQRRTVRSL 465
LDIP+V +++++LPND + +VHR GRTGRAGK G A + + + RSL
Sbjct: 472 LDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGIATAFFNENNAQLARSL 523
>AT3G58510.2 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:21640608-21643464 FORWARD LENGTH=612
Length = 612
Score = 237 bits (604), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 138/352 (39%), Positives = 207/352 (58%), Gaps = 17/352 (4%)
Query: 127 PIQRAVLIPALEGRDIIARAKTGTGKTLAFGIPIIKHITEDEHAVSHRRSAGRLPRVLVL 186
P+QR + L RD++A A+TG+GKT AF PII I +D+H R S P ++L
Sbjct: 176 PVQRHAIPILLAERDLMACAQTGSGKTAAFCFPIISGIMKDQHVERPRGSRAVYPFAVIL 235
Query: 187 APTRELARQVEKEIKESAPY--LSTVCVYGGVSYVTQQSALTRGVDVVVGTPGRIIDLIN 244
+PTRELA Q+ E K+ + + V YGG Q L RG D++V TPGR+ DL+
Sbjct: 236 SPTRELACQIHDEAKKFSYQTGVKVVVAYGGTPIHQQLRELERGCDILVATPGRLNDLLE 295
Query: 245 GNSLKLSEVQYLVLDEADQMLAVGFEEDVETILETV--PSQ--RQTMLFSATMPGWVKKL 300
+ + +++L LDEAD+ML +GFE + I+E + P + RQTMLFSAT P +++L
Sbjct: 296 RARVSMQMIRFLALDEADRMLDMGFEPQIRKIVEQMDMPPRGVRQTMLFSATFPSQIQRL 355
Query: 301 SRKYLNNP--LTIDLVGDEEEKLAEGIKLYALSATSTSKRTILTDLI----TVYAKGGKT 354
+ +++N L + VG + + + ++ + KR+ L DL+ K T
Sbjct: 356 AADFMSNYIFLAVGRVGSSTDLITQRVEF----VQESDKRSHLMDLLHAQRETQDKQSLT 411
Query: 355 IVFTQTKRDADEVSLALT-SSITSEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARG 413
+VF +TKR AD + L + + ++HGD +Q +RE L F+ G+ +LVATDVAARG
Sbjct: 412 LVFVETKRGADTLENWLCMNEFPATSIHGDRTQQEREVALRSFKTGRTPILVATDVAARG 471
Query: 414 LDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKLGNAILMYTNSQRRTVRSL 465
LDIP+V +++++LPND + +VHR GRTGRAGK G A + + + RSL
Sbjct: 472 LDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGIATAFFNENNAQLARSL 523
>AT3G58510.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:21640608-21643464 FORWARD LENGTH=612
Length = 612
Score = 237 bits (604), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 138/352 (39%), Positives = 207/352 (58%), Gaps = 17/352 (4%)
Query: 127 PIQRAVLIPALEGRDIIARAKTGTGKTLAFGIPIIKHITEDEHAVSHRRSAGRLPRVLVL 186
P+QR + L RD++A A+TG+GKT AF PII I +D+H R S P ++L
Sbjct: 176 PVQRHAIPILLAERDLMACAQTGSGKTAAFCFPIISGIMKDQHVERPRGSRAVYPFAVIL 235
Query: 187 APTRELARQVEKEIKESAPY--LSTVCVYGGVSYVTQQSALTRGVDVVVGTPGRIIDLIN 244
+PTRELA Q+ E K+ + + V YGG Q L RG D++V TPGR+ DL+
Sbjct: 236 SPTRELACQIHDEAKKFSYQTGVKVVVAYGGTPIHQQLRELERGCDILVATPGRLNDLLE 295
Query: 245 GNSLKLSEVQYLVLDEADQMLAVGFEEDVETILETV--PSQ--RQTMLFSATMPGWVKKL 300
+ + +++L LDEAD+ML +GFE + I+E + P + RQTMLFSAT P +++L
Sbjct: 296 RARVSMQMIRFLALDEADRMLDMGFEPQIRKIVEQMDMPPRGVRQTMLFSATFPSQIQRL 355
Query: 301 SRKYLNNP--LTIDLVGDEEEKLAEGIKLYALSATSTSKRTILTDLI----TVYAKGGKT 354
+ +++N L + VG + + + ++ + KR+ L DL+ K T
Sbjct: 356 AADFMSNYIFLAVGRVGSSTDLITQRVEF----VQESDKRSHLMDLLHAQRETQDKQSLT 411
Query: 355 IVFTQTKRDADEVSLALT-SSITSEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARG 413
+VF +TKR AD + L + + ++HGD +Q +RE L F+ G+ +LVATDVAARG
Sbjct: 412 LVFVETKRGADTLENWLCMNEFPATSIHGDRTQQEREVALRSFKTGRTPILVATDVAARG 471
Query: 414 LDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKLGNAILMYTNSQRRTVRSL 465
LDIP+V +++++LPND + +VHR GRTGRAGK G A + + + RSL
Sbjct: 472 LDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGIATAFFNENNAQLARSL 523
>AT3G58570.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:21657099-21660352
FORWARD LENGTH=646
Length = 646
Score = 237 bits (604), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 137/354 (38%), Positives = 205/354 (57%), Gaps = 19/354 (5%)
Query: 127 PIQRAVLIPALEGRDIIARAKTGTGKTLAFGIPIIKHITEDEHAVSHRRSAGRLPRVLVL 186
P+QR + GRD++A A+TG+GKT AF PII I +D+H R G P ++L
Sbjct: 171 PVQRNAIPILAAGRDLMACAQTGSGKTAAFCFPIISGIMKDQHIERPRGVRGVYPLAVIL 230
Query: 187 APTRELARQVEKEIKESAPY--LSTVCVYGGVSYVTQQSALTRGVDVVVGTPGRIIDLIN 244
+PTRELA Q+ E ++ + + V YGG Q L RGVD++V TPGR+ DL+
Sbjct: 231 SPTRELACQIHDEARKFSYQTGVKVVVAYGGTPVNQQIRELERGVDILVATPGRLNDLLE 290
Query: 245 GNSLKLSEVQYLVLDEADQMLAVGFEEDVETILETV----PSQRQTMLFSATMPGWVKKL 300
+ L V++L LDEAD+ML +GFE + I++ + P RQTMLFSAT P +++L
Sbjct: 291 RGRVSLQMVRFLALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPREIQRL 350
Query: 301 SRKYLNNP--LTIDLVGDEEEKLAEGIKLYALSATSTSKRTILTDLITVYAKGGK----- 353
+ +L+N L + VG + + + ++ + KR+ L DL+ + G
Sbjct: 351 ASDFLSNYIFLAVGRVGSSTDLIVQRVEF----VHDSDKRSHLMDLLHAQRENGNQGKQA 406
Query: 354 -TIVFTQTKRDADEVSLALT-SSITSEALHGDISQHQRERTLNGFRQGKFTVLVATDVAA 411
T+VF +TK+ AD + L + + +HGD SQ +RE L F+ G+ +LVATDVAA
Sbjct: 407 LTLVFVETKKGADSLENWLCINGFPATTIHGDRSQQEREVALRSFKTGRTPILVATDVAA 466
Query: 412 RGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKLGNAILMYTNSQRRTVRSL 465
RGLDIP+V +++++LPND + +VHR GRTGRAG G A + ++ + L
Sbjct: 467 RGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGNSGLATAFFNDNNTTMAKPL 520
>AT1G31970.1 | Symbols: STRS1 | DEA(D/H)-box RNA helicase family
protein | chr1:11479921-11482707 FORWARD LENGTH=537
Length = 537
Score = 236 bits (603), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 142/335 (42%), Positives = 204/335 (60%), Gaps = 8/335 (2%)
Query: 127 PIQRAVLIPALEGRDIIARAKTGTGKTLAFGIPIIKHITEDEHAVSHRRSAGRLPRVLVL 186
PIQ L+GRD+I AKTG+GKTLAFGIP I H+ + + S P LVL
Sbjct: 139 PIQSHTWPFLLDGRDLIGIAKTGSGKTLAFGIPAIMHVLKKNKKIGGG-SKKVNPTCLVL 197
Query: 187 APTRELARQVEKEIKESAP--YLSTVCVYGGVSYVTQQSALTRGVDVVVGTPGRIIDLIN 244
+PTRELA Q+ ++E+ L ++CVYGG S Q SA+ GVD+V+GTPGR+ DLI
Sbjct: 198 SPTRELAVQISDVLREAGEPCGLKSICVYGGSSKGPQISAIRSGVDIVIGTPGRLRDLIE 257
Query: 245 GNSLKLSEVQYLVLDEADQMLAVGFEEDVETILETVPSQRQTMLFSATMPGWVKKLSRKY 304
N L+LS+V ++VLDEAD+ML +GFEE V IL RQ ++FSAT P V KL++++
Sbjct: 258 SNVLRLSDVSFVVLDEADRMLDMGFEEPVRFILSNTNKVRQMVMFSATWPLDVHKLAQEF 317
Query: 305 LN-NPLTIDLVGDEEEKLAEGIKLYALSATSTSKRTILTDLITVYAKGGKT--IVFTQTK 361
++ NP+ + ++G + + ++ L L+ Y K K +VF K
Sbjct: 318 MDPNPIKV-IIGSVDLAANHDVMQIIEVLDERARDQRLIALLEKYHKSQKNRVLVFALYK 376
Query: 362 RDADEVSLALTS-SITSEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVD 420
+A+ + L + ++HG+ +Q +R R+L+ F++G +LVATDVAARGLDIP+V+
Sbjct: 377 VEAERLERFLQQRGWKAVSIHGNKAQSERTRSLSLFKEGSCPLLVATDVAARGLDIPDVE 436
Query: 421 LIIHYELPNDPETFVHRSGRTGRAGKLGNAILMYT 455
++I+Y P E +VHR GRTGRAGK G A +T
Sbjct: 437 VVINYTFPLTTEDYVHRIGRTGRAGKKGVAHTFFT 471
>AT1G20920.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:7286356-7288842
FORWARD LENGTH=828
Length = 828
Score = 228 bits (582), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 133/350 (38%), Positives = 206/350 (58%), Gaps = 13/350 (3%)
Query: 108 GLPPRLVESLHNRSITHLFPIQRAVLIPALEGRDIIARAKTGTGKTLAFGIPIIKHITED 167
GL ++++++ + PIQ L + GRD I AKTG+GKTL F +P+++HI +D
Sbjct: 197 GLTSKILDTMKKLNYEKPMPIQTQALPIIMSGRDCIGVAKTGSGKTLGFVLPMLRHI-KD 255
Query: 168 EHAVSHRRSAGRLPRVLVLAPTRELARQVEKEIKESAPYLSTVCV--YGGVSYVTQQSAL 225
+ V AG P LV+APTREL +Q+ +I++ + L CV YGG Q S L
Sbjct: 256 QPPVE----AGDGPIGLVMAPTRELVQQIHSDIRKFSKPLGIRCVPVYGGSGVAQQISEL 311
Query: 226 TRGVDVVVGTPGRIIDLI---NGNSLKLSEVQYLVLDEADQMLAVGFEEDVETILETVPS 282
RG ++VV TPGR+ID++ +G L V +LV+DEAD+M +GFE + I++ +
Sbjct: 312 KRGTEIVVCTPGRMIDILCTSSGKITNLRRVTFLVMDEADRMFDMGFEPQITRIIQNIRP 371
Query: 283 QRQTMLFSATMPGWVKKLSRKYLNNPLTIDLVGDEEEKLAEGIKLYALSATSTSKRTILT 342
+RQT+LFSAT P V+ L+RK LN P+ I + G + + I + + L
Sbjct: 372 ERQTVLFSATFPRQVETLARKVLNKPVEIQVGG--RSVVNKDITQLVEVRPESDRFLRLL 429
Query: 343 DLITVYAKGGKTIVFTQTKRDADEVSL-ALTSSITSEALHGDISQHQRERTLNGFRQGKF 401
+L+ +++ GK +VF Q++ D + + SS +LHG Q RE T++ F+
Sbjct: 430 ELLGEWSEKGKILVFVQSQEKCDALYRDMIKSSYPCLSLHGGKDQTDRESTISDFKNDVC 489
Query: 402 TVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKLGNAI 451
+L+AT VAARGLD+ ++L+++++ PN E +VHR GRTGRAG+ G A+
Sbjct: 490 NLLIATSVAARGLDVKELELVVNFDAPNHYEDYVHRVGRTGRAGRKGCAV 539
>AT1G20920.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:7285342-7288842
FORWARD LENGTH=1166
Length = 1166
Score = 228 bits (580), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 133/350 (38%), Positives = 206/350 (58%), Gaps = 13/350 (3%)
Query: 108 GLPPRLVESLHNRSITHLFPIQRAVLIPALEGRDIIARAKTGTGKTLAFGIPIIKHITED 167
GL ++++++ + PIQ L + GRD I AKTG+GKTL F +P+++HI +D
Sbjct: 535 GLTSKILDTMKKLNYEKPMPIQTQALPIIMSGRDCIGVAKTGSGKTLGFVLPMLRHI-KD 593
Query: 168 EHAVSHRRSAGRLPRVLVLAPTRELARQVEKEIKESAPYLSTVCV--YGGVSYVTQQSAL 225
+ V AG P LV+APTREL +Q+ +I++ + L CV YGG Q S L
Sbjct: 594 QPPVE----AGDGPIGLVMAPTRELVQQIHSDIRKFSKPLGIRCVPVYGGSGVAQQISEL 649
Query: 226 TRGVDVVVGTPGRIIDLI---NGNSLKLSEVQYLVLDEADQMLAVGFEEDVETILETVPS 282
RG ++VV TPGR+ID++ +G L V +LV+DEAD+M +GFE + I++ +
Sbjct: 650 KRGTEIVVCTPGRMIDILCTSSGKITNLRRVTFLVMDEADRMFDMGFEPQITRIIQNIRP 709
Query: 283 QRQTMLFSATMPGWVKKLSRKYLNNPLTIDLVGDEEEKLAEGIKLYALSATSTSKRTILT 342
+RQT+LFSAT P V+ L+RK LN P+ I + G + + I + + L
Sbjct: 710 ERQTVLFSATFPRQVETLARKVLNKPVEIQVGG--RSVVNKDITQLVEVRPESDRFLRLL 767
Query: 343 DLITVYAKGGKTIVFTQTKRDADEVSLAL-TSSITSEALHGDISQHQRERTLNGFRQGKF 401
+L+ +++ GK +VF Q++ D + + SS +LHG Q RE T++ F+
Sbjct: 768 ELLGEWSEKGKILVFVQSQEKCDALYRDMIKSSYPCLSLHGGKDQTDRESTISDFKNDVC 827
Query: 402 TVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKLGNAI 451
+L+AT VAARGLD+ ++L+++++ PN E +VHR GRTGRAG+ G A+
Sbjct: 828 NLLIATSVAARGLDVKELELVVNFDAPNHYEDYVHRVGRTGRAGRKGCAV 877
>AT2G33730.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:14265679-14267880
REVERSE LENGTH=733
Length = 733
Score = 222 bits (566), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 137/352 (38%), Positives = 200/352 (56%), Gaps = 31/352 (8%)
Query: 127 PIQRAVLIPALEGRDIIARAKTGTGKTLAFGIPIIKHITEDEHAVSHRRSAGRLPRVLVL 186
PIQ A + L+ RD+I A+TG+GKT AF +P++ +I+ + G P +V+
Sbjct: 338 PIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLAYISRLPPMSEENETEG--PYAVVM 395
Query: 187 APTRELARQVEKEIKESAPYL--STVCVYGGVSYVTQQSALTRGVDVVVGTPGRIIDLIN 244
APTRELA+Q+E+E + A YL + GG S Q +T+G ++V+ TPGR+ID +
Sbjct: 396 APTRELAQQIEEETVKFAHYLGFRVTSIVGGQSIEEQGLKITQGCEIVIATPGRLIDCLE 455
Query: 245 GNSLKLSEVQYLVLDEADQMLAVGFEEDVETILETVPSQ-----------------RQTM 287
L++ Y+VLDEAD+M+ +GFE V +L+ +PS R T
Sbjct: 456 RRYAVLNQCNYVVLDEADRMIDMGFEPQVAGVLDAMPSSNLKPENEEEELDEKKIYRTTY 515
Query: 288 LFSATMPGWVKKLSRKYLNNPL--TIDLVGDEEEKLAEGIKLYALSATSTSKRTILTDLI 345
+FSATMP V++L+RKYL NP+ TI G + +++ + + S + +L +L
Sbjct: 516 MFSATMPPGVERLARKYLRNPVVVTIGTAGKTTDLISQHVIMMKESEKFFRLQKLLDEL- 574
Query: 346 TVYAKGGKT-IVFTQTKRDADEVSLALTSS-ITSEALHGDISQHQRERTLNGFRQGKFTV 403
G KT IVF TK++ D ++ L + LHG SQ QRE +L GFR ++ V
Sbjct: 575 -----GEKTAIVFVNTKKNCDSIAKNLDKAGYRVTTLHGGKSQEQREISLEGFRAKRYNV 629
Query: 404 LVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKLGNAILMYT 455
LVATDV RG+DIP+V +I+Y++P E + HR GRTGRAGK G A T
Sbjct: 630 LVATDVVGRGIDIPDVAHVINYDMPKHIEMYTHRIGRTGRAGKSGVATSFLT 681
>AT1G72730.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:27378040-27379593 REVERSE LENGTH=414
Length = 414
Score = 221 bits (562), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 136/366 (37%), Positives = 209/366 (57%), Gaps = 19/366 (5%)
Query: 107 LGLPPRLVESLHNRSITHLFPIQRAVLIPALEGRDIIARAKTGTGKTLAFGIPIIKHITE 166
+ L P L+ ++ IQ+ +IP +G D+I +A++GTGKT F +++ +
Sbjct: 46 MELQPDLLRGIYAYGFEKPSAIQQRGIIPFCKGLDVIQQAQSGTGKTATFCSGVLQQL-- 103
Query: 167 DEHAVSHRRSAGRLPRVLVLAPTRELARQVEKEIKESAPYL---STVCVYGGVSYVTQQS 223
D V + LVLAPTRELA+Q+EK ++ YL + CV GG S Q
Sbjct: 104 DISLVQ--------CQALVLAPTRELAQQIEKVMRALGDYLGVKAQACV-GGTSVREDQR 154
Query: 224 ALTRGVDVVVGTPGRIIDLINGNSLKLSEVQYLVLDEADQMLAVGFEEDVETILETVPSQ 283
L GV VVVGTPGR+ DL+ SL+ ++ VLDEAD+ML+ GF++ + I + +PS+
Sbjct: 155 VLQSGVHVVVGTPGRVFDLLRRQSLRADAIKMFVLDEADEMLSRGFKDQIYDIFQLLPSK 214
Query: 284 RQTMLFSATMPGWVKKLSRKYLNNPLTIDLVGDEEEKLAEGIKLYALSATSTS-KRTILT 342
Q +FSATMP +++RK++N P+ I LV +E L EGIK + ++ K L
Sbjct: 215 VQVGVFSATMPPEALEITRKFMNKPVRI-LVKRDELTL-EGIKQFYVNVDKEEWKLETLC 272
Query: 343 DLITVYAKGGKTIVFTQTKRDADEVSLALTS-SITSEALHGDISQHQRERTLNGFRQGKF 401
DL A ++++F T+R D ++ + S T A HGD+ Q+ R+ + FR G
Sbjct: 273 DLYETLAI-TQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSS 331
Query: 402 TVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKLGNAILMYTNSQRRT 461
VL+ TD+ ARG+D+ V L+I+++LP PE ++HR GR+GR G+ G AI T+ R
Sbjct: 332 RVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFMTSEDERM 391
Query: 462 VRSLER 467
+ ++R
Sbjct: 392 MADIQR 397
>AT2G47330.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:19429083-19431617
REVERSE LENGTH=760
Length = 760
Score = 219 bits (558), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 141/359 (39%), Positives = 201/359 (55%), Gaps = 14/359 (3%)
Query: 108 GLPPRLVESLHNRSITHLFPIQRAVLIPALEGRDIIARAKTGTGKTLAFGIPIIKHITED 167
G +++ ++ ++ IQ L L GRD+I AKTG+GKT AF +P+I HI +
Sbjct: 234 GFSSQIMSAIKKQAYEKPTAIQCQALPIVLSGRDVIGIAKTGSGKTAAFVLPMIVHIMDQ 293
Query: 168 EHAVSHRRSAGRLPRVLVLAPTRELARQVEKEIKE-SAPY-LSTVCVYGGVSYVTQQSAL 225
+R G P ++ APTRELA Q+ E K+ S Y L VYGG+S Q L
Sbjct: 294 PEL---QRDEG--PIGVICAPTRELAHQIFLEAKKFSKAYGLRVSAVYGGMSKHEQFKEL 348
Query: 226 TRGVDVVVGTPGRIIDLINGNSLKLSEVQYLVLDEADQMLAVGFEEDVETILETVPSQRQ 285
G ++VV TPGR+ID++ +L + YLVLDEAD+M +GFE V +I+ + RQ
Sbjct: 349 KAGCEIVVATPGRLIDMLKMKALTMMRASYLVLDEADRMFDLGFEPQVRSIVGQIRPDRQ 408
Query: 286 TMLFSATMPGWVKKLSRKYLNNPL--TIDLVGDEEEKLAEGIKLYALSATSTSKRTILTD 343
T+LFSATMP V+KL+R+ L++P+ T+ VG E + + + + A K L +
Sbjct: 409 TLLFSATMPWKVEKLAREILSDPIRVTVGEVGMANEDITQVVNVIPSDA---EKLPWLLE 465
Query: 344 LITVYAKGGKTIVFTQTKRDADEVSLALT-SSITSEALHGDISQHQRERTLNGFRQGKFT 402
+ G +VF K DE+ LT +S ALHGD Q R TL F+ G
Sbjct: 466 KLPGMIDEGDVLVFASKKATVDEIEAQLTLNSFKVAALHGDKDQASRMETLQKFKSGVHH 525
Query: 403 VLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAG-KLGNAILMYTNSQRR 460
VL+ATDVAARGLDI ++ +++Y++ D + VHR GRTGRAG + G A + T + R
Sbjct: 526 VLIATDVAARGLDIKSLKTVVNYDIAKDMDMHVHRIGRTGRAGDRDGVAYTLVTQREAR 584
>AT5G51280.1 | Symbols: | DEAD-box protein abstrakt, putative |
chr5:20841456-20843645 FORWARD LENGTH=591
Length = 591
Score = 215 bits (547), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 128/375 (34%), Positives = 201/375 (53%), Gaps = 37/375 (9%)
Query: 107 LGLPPRLVESLHNRSITHLFPIQRAVLIPALEGRDIIARAKTGTGKTLAFGIPIIKHITE 166
+ P ++++L + I PIQ L L GRD+I A TG+GKTL F +P+I +
Sbjct: 151 MKFPRPVLDTLKEKGIVQPTPIQVQGLPVILAGRDMIGIAFTGSGKTLVFVLPMIMIALQ 210
Query: 167 DEHAVSHRRSAGRLPRVLVLAPTRELARQVEKEIKESA---------PYLSTVCVYGGVS 217
+E + +AG P L++ P+RELARQ + +++ P S +C+ GG+
Sbjct: 211 EEMMMPI--AAGEGPIGLIVCPSRELARQTYEVVEQFVAPLVEAGYPPLRSLLCI-GGID 267
Query: 218 YVTQQSALTRGVDVVVGTPGRIIDLINGNSLKLSEVQYLVLDEADQMLAVGFEEDVETIL 277
+Q + RGV +VV TPGR+ D++ + L +YL LDEAD+++ +GFE+D+ +
Sbjct: 268 MRSQLEVVKRGVHIVVATPGRLKDMLAKKKMSLDACRYLTLDEADRLVDLGFEDDIREVF 327
Query: 278 ETVPSQRQTMLFSATMPGWVKKLSRKYLNNPLTI----------DLVGDEEEKLAEGIKL 327
+ SQRQT+LFSATMP ++ +R L P+T+ D++ + E E +
Sbjct: 328 DHFKSQRQTLLFSATMPTKIQIFARSALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIV 387
Query: 328 YALSATSTSKRTILTDLITVYAKGGKTIVFTQTKRDADEV-SLALTSSITSEALHGDISQ 386
Y L + +L +F + K D D++ L + + A+HG Q
Sbjct: 388 YLLECLQKTSPPVL--------------IFCENKADVDDIHEYLLLKGVEAVAIHGGKDQ 433
Query: 387 HQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGK 446
RE ++ F+ GK VLVATDVA++GLD P++ +I+Y++P + E +VHR GRTGR GK
Sbjct: 434 EDREYAISSFKAGKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYVHRIGRTGRCGK 493
Query: 447 LGNAILMYTNSQRRT 461
G A +Q T
Sbjct: 494 TGIATTFINKNQSET 508
>AT1G16280.1 | Symbols: RH36, AtRH36, SWA3 | RNA helicase 36 |
chr1:5568482-5570487 REVERSE LENGTH=491
Length = 491
Score = 213 bits (542), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 138/408 (33%), Positives = 214/408 (52%), Gaps = 23/408 (5%)
Query: 92 FLSDSPTADELDVTK---LGLPPRLVESLHNRSITHLFPIQRAVLIPALEGRDIIARAKT 148
F + +P++D T LGL VE+ + P+Q + L GRD++ A+T
Sbjct: 45 FTNPNPSSDTTSATNFEGLGLAEWAVETCKELGMRKPTPVQTHCVPKILAGRDVLGLAQT 104
Query: 149 GTGKTLAFGIPIIKHITEDEHAVSHRRSAGRLPRVLVLAPTRELARQVEKEIKESAPYLS 208
G+GKT AF +PI+ + ED + V LV+ PTRELA Q+ ++ K L+
Sbjct: 105 GSGKTAAFALPILHRLAEDPYGVF----------ALVVTPTRELAFQLAEQFKALGSCLN 154
Query: 209 TVC--VYGGVSYVTQQSALTRGVDVVVGTPGRIIDLINGNS---LKLSEVQYLVLDEADQ 263
C + GG+ +TQ +L +V+ TPGRI L+ N S ++LVLDEAD+
Sbjct: 155 LRCSVIVGGMDMLTQTMSLVSRPHIVITTPGRIKVLLENNPDVPPVFSRTKFLVLDEADR 214
Query: 264 MLAVGFEEDVETILETVPSQRQTMLFSATMPGWVKKLSRKYLNNPLTIDLVGDEEEKLAE 323
+L VGF++++ TI + +P RQT+LFSATM ++ L N + E K +
Sbjct: 215 VLDVGFQDELRTIFQCLPKSRQTLLFSATMTSNLQALLEHSSNKAYFYE--AYEGLKTVD 272
Query: 324 GIKLYALSATSTSKRTILTDLITVYAKGG--KTIVFTQTKRDADEVSLALTS-SITSEAL 380
+ + +K L +++ G ++F T R +SL L + + A+
Sbjct: 273 TLTQQFIFEDKDAKELYLVHILSQMEDKGIRSAMIFVSTCRTCQRLSLMLDELEVENIAM 332
Query: 381 HGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGR 440
H SQ R L+ F+ GK +L+ATDVA+RGLDIP VDL+I+Y++P DP +VHR GR
Sbjct: 333 HSLNSQSMRLSALSKFKSGKVPILLATDVASRGLDIPTVDLVINYDIPRDPRDYVHRVGR 392
Query: 441 TGRAGKLGNAILMYTNSQRRTVRSLERDVGCKFEFVNPPAMEEVLAAS 488
T RAG+ G A+ + T + + + +E +VG K E N + + L +
Sbjct: 393 TARAGRGGLAVSIITETDVKLIHKIEEEVGKKMEPYNKKVITDSLEVT 440
>AT1G51380.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:19047960-19049967 FORWARD LENGTH=392
Length = 392
Score = 213 bits (541), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 131/375 (34%), Positives = 212/375 (56%), Gaps = 25/375 (6%)
Query: 107 LGLPPRLVESLHNRSITHLFPIQRAVLIPALEGRDIIARAKTGTGKTLAFGIPIIKHITE 166
+G+ +++ +++ IQ+ L+P L+GRD+IA+A++GTGKT I + + +
Sbjct: 27 MGMNDKVLRGVYDYGYKKPSEIQQRALVPILKGRDVIAQAQSGTGKTSMIAISVCQIVN- 85
Query: 167 DEHAVSHRRSAGRLPRVLVLAPTRELARQVEKEIKESAPYLST---VCVYGGVSYVTQQS 223
+S R+ +VLVL+P+RELA Q EK I+ + + C+ GG S
Sbjct: 86 ----ISSRKV-----QVLVLSPSRELASQTEKTIQAIGAHTNIQAHACI-GGKSIGEDIK 135
Query: 224 ALTRGVDVVVGTPGRIIDLINGNSLKLSEVQYLVLDEADQMLAVGFEEDVETILETVPSQ 283
L RGV V GTPGR+ D+I SL+ V+ LVLDE+D+ML+ G ++ + + +P
Sbjct: 136 KLERGVHAVSGTPGRVYDMIKRGSLQTKAVKLLVLDESDEMLSKGLKDQIYDVYRALPHD 195
Query: 284 RQTMLFSATMPGWVKKLSRKYLNNPLTIDLVGDEEEKLAEGIKLYALSATSTS-KRTILT 342
Q L SAT+P + +++ K++ +P+ I LV +E L EGIK Y + K L
Sbjct: 196 IQVCLISATLPQEILEMTEKFMTDPVRI-LVKPDELTL-EGIKQYYVDVDKEEWKFDTLC 253
Query: 343 DL---ITVYAKGGKTIVFTQTKRDADEVSLALTSS-ITSEALHGDISQHQRERTLNGFRQ 398
DL +T+ + I+F T++ D ++ + SS ++HGD Q +R+ +N FR
Sbjct: 254 DLYGRLTI----NQAIIFCNTRQKVDWLTEKMRSSNFIVSSMHGDKRQKERDDIMNQFRS 309
Query: 399 GKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKLGNAILMYTNSQ 458
K VL+A+DV ARG+D+ V +I+Y++PN+PE ++HR GR GR G+ G AI +S
Sbjct: 310 FKSRVLIASDVWARGIDVQTVSHVINYDIPNNPELYIHRIGRAGRFGREGVAINFVKSSD 369
Query: 459 RRTVRSLERDVGCKF 473
+ ++ +ER G K
Sbjct: 370 MKDLKDIERHYGTKI 384
>AT4G16630.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr4:9362176-9366449 REVERSE LENGTH=789
Length = 789
Score = 212 bits (540), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 135/355 (38%), Positives = 199/355 (56%), Gaps = 17/355 (4%)
Query: 127 PIQRAVLIPALEGRDIIARAKTGTGKTLAFGIPIIKHITEDEHAVSHRRSAGRLPRVLVL 186
PIQ A + AL GRD+ A A TG+GKT AF +P ++ + R RVL+L
Sbjct: 192 PIQAACIPLALTGRDLCASAITGSGKTAAFALPTLERLL-------FRPKRVFATRVLIL 244
Query: 187 APTRELARQVEKEIKESAPYLSTVC--VYGGVSYVTQQSALTRGVDVVVGTPGRIID-LI 243
PTRELA Q+ I+ A + C + GG+S Q+ L D+VV TPGR+ID L
Sbjct: 245 TPTRELAVQIHSMIQNLAQFTDIKCGLIVGGLSVREQEVVLRSMPDIVVATPGRMIDHLR 304
Query: 244 NGNSLKLSEVQYLVLDEADQMLAVGFEEDVETILETVPSQRQTMLFSATMPGWVKKLSRK 303
N S+ L ++ L+LDEAD++L GF ++ ++ P +RQTMLFSATM VK+L +
Sbjct: 305 NSMSVDLDDLAVLILDEADRLLQTGFATEITELVRLCPKRRQTMLFSATMTEEVKELVKL 364
Query: 304 YLNNPLTIDLVGDEEEKLAEGIKLYALSATST---SKRTILTDLITVYAKGGKTIVFTQT 360
LN PL L D + G+ + T ++ +L L T K K I+F+ T
Sbjct: 365 SLNKPLR--LSADPSARRPPGLTEEVVRIRRTREANQEAVLLSLCTRTFKS-KVIIFSGT 421
Query: 361 KRDADEVSLAL-TSSITSEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNV 419
K+ A + + + + + LHG+++Q QR +L FR+ + L+ATDVAARGLDI V
Sbjct: 422 KQAAHRLKILFGLAGLKAAELHGNLTQAQRLDSLELFRKQEVDFLIATDVAARGLDIIGV 481
Query: 420 DLIIHYELPNDPETFVHRSGRTGRAGKLGNAILMYTNSQRRTVRSLERDVGCKFE 474
+I+Y P + +++VHR GRT RAG+ G A+ T+S R ++ + + VG K +
Sbjct: 482 QTVINYACPREIDSYVHRVGRTARAGREGYAVTFVTDSDRSLLKVIAKKVGSKLK 536
>AT3G13920.1 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translation
initiation factor 4A1 | chr3:4592635-4594128 REVERSE
LENGTH=412
Length = 412
Score = 212 bits (539), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 130/366 (35%), Positives = 206/366 (56%), Gaps = 19/366 (5%)
Query: 107 LGLPPRLVESLHNRSITHLFPIQRAVLIPALEGRDIIARAKTGTGKTLAFGIPIIKHITE 166
+GL L+ ++ IQ+ ++P +G D+I +A++GTGKT F +++ +
Sbjct: 44 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQL-- 101
Query: 167 DEHAVSHRRSAGRLPRVLVLAPTRELARQVEKEIKESAPYLST---VCVYGGVSYVTQQS 223
D + + LVLAPTRELA+Q+EK ++ YL CV GG S Q
Sbjct: 102 DFSLIQ--------CQALVLAPTRELAQQIEKVMRALGDYLGVKVHACV-GGTSVREDQR 152
Query: 224 ALTRGVDVVVGTPGRIIDLINGNSLKLSEVQYLVLDEADQMLAVGFEEDVETILETVPSQ 283
L GV VVVGTPGR+ D++ SL+ ++ VLDEAD+ML+ GF++ + I + +P +
Sbjct: 153 ILQAGVHVVVGTPGRVFDMLKRQSLRADNIKMFVLDEADEMLSRGFKDQIYDIFQLLPPK 212
Query: 284 RQTMLFSATMPGWVKKLSRKYLNNPLTIDLVGDEEEKLAEGIKLYALSATSTS-KRTILT 342
Q +FSATMP +++RK+++ P+ I LV +E L EGIK + ++ K L
Sbjct: 213 IQVGVFSATMPPEALEITRKFMSKPVRI-LVKRDELTL-EGIKQFYVNVEKEEWKLETLC 270
Query: 343 DLITVYAKGGKTIVFTQTKRDADEVSLALTS-SITSEALHGDISQHQRERTLNGFRQGKF 401
DL A ++++F T+R D ++ + S T A HGD+ Q+ R+ + FR G
Sbjct: 271 DLYETLAI-TQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSS 329
Query: 402 TVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKLGNAILMYTNSQRRT 461
VL+ TD+ ARG+D+ V L+I+++LP PE ++HR GR+GR G+ G AI T R
Sbjct: 330 RVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERM 389
Query: 462 VRSLER 467
+ +++
Sbjct: 390 LFDIQK 395
>AT3G13920.2 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translation
initiation factor 4A1 | chr3:4592586-4594128 REVERSE
LENGTH=415
Length = 415
Score = 211 bits (538), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 130/361 (36%), Positives = 203/361 (56%), Gaps = 19/361 (5%)
Query: 107 LGLPPRLVESLHNRSITHLFPIQRAVLIPALEGRDIIARAKTGTGKTLAFGIPIIKHITE 166
+GL L+ ++ IQ+ ++P +G D+I +A++GTGKT F +++ +
Sbjct: 44 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQL-- 101
Query: 167 DEHAVSHRRSAGRLPRVLVLAPTRELARQVEKEIKESAPYLST---VCVYGGVSYVTQQS 223
D + + LVLAPTRELA+Q+EK ++ YL CV GG S Q
Sbjct: 102 DFSLIQ--------CQALVLAPTRELAQQIEKVMRALGDYLGVKVHACV-GGTSVREDQR 152
Query: 224 ALTRGVDVVVGTPGRIIDLINGNSLKLSEVQYLVLDEADQMLAVGFEEDVETILETVPSQ 283
L GV VVVGTPGR+ D++ SL+ ++ VLDEAD+ML+ GF++ + I + +P +
Sbjct: 153 ILQAGVHVVVGTPGRVFDMLKRQSLRADNIKMFVLDEADEMLSRGFKDQIYDIFQLLPPK 212
Query: 284 RQTMLFSATMPGWVKKLSRKYLNNPLTIDLVGDEEEKLAEGIKLYALSATSTS-KRTILT 342
Q +FSATMP +++RK+++ P+ I LV +E L EGIK + ++ K L
Sbjct: 213 IQVGVFSATMPPEALEITRKFMSKPVRI-LVKRDELTL-EGIKQFYVNVEKEEWKLETLC 270
Query: 343 DLITVYAKGGKTIVFTQTKRDADEVSLALTS-SITSEALHGDISQHQRERTLNGFRQGKF 401
DL A ++++F T+R D ++ + S T A HGD+ Q+ R+ + FR G
Sbjct: 271 DLYETLAI-TQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSS 329
Query: 402 TVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKLGNAILMYTNSQRRT 461
VL+ TD+ ARG+D+ V L+I+++LP PE ++HR GR+GR G+ G AI T R
Sbjct: 330 RVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERM 389
Query: 462 V 462
+
Sbjct: 390 L 390
>AT3G13920.3 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translation
initiation factor 4A1 | chr3:4592635-4594094 REVERSE
LENGTH=402
Length = 402
Score = 211 bits (537), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 130/366 (35%), Positives = 206/366 (56%), Gaps = 19/366 (5%)
Query: 107 LGLPPRLVESLHNRSITHLFPIQRAVLIPALEGRDIIARAKTGTGKTLAFGIPIIKHITE 166
+GL L+ ++ IQ+ ++P +G D+I +A++GTGKT F +++ +
Sbjct: 34 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQL-- 91
Query: 167 DEHAVSHRRSAGRLPRVLVLAPTRELARQVEKEIKESAPYLST---VCVYGGVSYVTQQS 223
D + + LVLAPTRELA+Q+EK ++ YL CV GG S Q
Sbjct: 92 DFSLIQ--------CQALVLAPTRELAQQIEKVMRALGDYLGVKVHACV-GGTSVREDQR 142
Query: 224 ALTRGVDVVVGTPGRIIDLINGNSLKLSEVQYLVLDEADQMLAVGFEEDVETILETVPSQ 283
L GV VVVGTPGR+ D++ SL+ ++ VLDEAD+ML+ GF++ + I + +P +
Sbjct: 143 ILQAGVHVVVGTPGRVFDMLKRQSLRADNIKMFVLDEADEMLSRGFKDQIYDIFQLLPPK 202
Query: 284 RQTMLFSATMPGWVKKLSRKYLNNPLTIDLVGDEEEKLAEGIKLYALSATSTS-KRTILT 342
Q +FSATMP +++RK+++ P+ I LV +E L EGIK + ++ K L
Sbjct: 203 IQVGVFSATMPPEALEITRKFMSKPVRI-LVKRDELTL-EGIKQFYVNVEKEEWKLETLC 260
Query: 343 DLITVYAKGGKTIVFTQTKRDADEVSLALTS-SITSEALHGDISQHQRERTLNGFRQGKF 401
DL A ++++F T+R D ++ + S T A HGD+ Q+ R+ + FR G
Sbjct: 261 DLYETLAI-TQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSS 319
Query: 402 TVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKLGNAILMYTNSQRRT 461
VL+ TD+ ARG+D+ V L+I+++LP PE ++HR GR+GR G+ G AI T R
Sbjct: 320 RVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERM 379
Query: 462 VRSLER 467
+ +++
Sbjct: 380 LFDIQK 385
>AT4G33370.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr4:16069669-16071405 REVERSE LENGTH=542
Length = 542
Score = 211 bits (537), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 126/371 (33%), Positives = 197/371 (53%), Gaps = 35/371 (9%)
Query: 107 LGLPPRLVESLHNRSITHLFPIQRAVLIPALEGRDIIARAKTGTGKTLAFGIPIIKHITE 166
+ P L+ L ++ I H PIQ L L GRD+I A TG+GKTL F +P+I +
Sbjct: 102 MKFPSPLLRMLKDKGIMHPTPIQVQGLPVVLSGRDMIGIAFTGSGKTLVFVLPMIILALQ 161
Query: 167 DEHAVSHRRSAGRLPRVLVLAPTRELARQ--------VEKEIKESAPYLSTVCVYGGVSY 218
+E + +AG P LV+ P+RELA+Q V +++ P L ++ GGV
Sbjct: 162 EE--IMMPIAAGEGPIALVICPSRELAKQTYDVVEQFVASLVEDGYPRLRSLLCIGGVDM 219
Query: 219 VTQQSALTRGVDVVVGTPGRIIDLINGNSLKLSEVQYLVLDEADQMLAVGFEEDVETILE 278
+Q + +GV +VV TPGR+ D++ + L + L LDEAD+++ +GFE+D+ + +
Sbjct: 220 RSQLDVVKKGVHIVVATPGRLKDILAKKKMSLDACRLLTLDEADRLVDLGFEDDIRHVFD 279
Query: 279 TVPSQRQTMLFSATMPGWVKKLSRKYLNNPLTI----------DLVGDEEEKLAEGIKLY 328
SQRQT+LFSATMP ++ + L P+T+ D++ + E E +Y
Sbjct: 280 HFKSQRQTLLFSATMPAKIQIFATSALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVY 339
Query: 329 ALSATSTSKRTILTDLITVYAKGGKTIVFTQTKRDADEV-SLALTSSITSEALHGDISQH 387
L + +L +F + K D D++ L + + A+HG Q
Sbjct: 340 LLECLQKTTPPVL--------------IFCENKADVDDIHEYLLLKGVEAVAIHGGKDQE 385
Query: 388 QRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKL 447
R+ ++ F+ GK VLVATDVA++GLD P++ +I+Y++P + E +VHR GRTGR GK
Sbjct: 386 DRDYAISLFKAGKKDVLVATDVASKGLDFPDIQHVINYDMPGEIENYVHRIGRTGRCGKT 445
Query: 448 GNAILMYTNSQ 458
G A +Q
Sbjct: 446 GIATTFINKNQ 456
>AT3G13920.4 | Symbols: EIF4A1 | eukaryotic translation initiation
factor 4A1 | chr3:4592635-4594128 REVERSE LENGTH=407
Length = 407
Score = 209 bits (533), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 131/366 (35%), Positives = 205/366 (56%), Gaps = 24/366 (6%)
Query: 107 LGLPPRLVESLHNRSITHLFPIQRAVLIPALEGRDIIARAKTGTGKTLAFGIPIIKHITE 166
+GL L+ S IQ+ ++P +G D+I +A++GTGKT F +++ +
Sbjct: 44 MGLQENLLRGFEKPS-----AIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQL-- 96
Query: 167 DEHAVSHRRSAGRLPRVLVLAPTRELARQVEKEIKESAPYLST---VCVYGGVSYVTQQS 223
D + + LVLAPTRELA+Q+EK ++ YL CV GG S Q
Sbjct: 97 DFSLIQ--------CQALVLAPTRELAQQIEKVMRALGDYLGVKVHACV-GGTSVREDQR 147
Query: 224 ALTRGVDVVVGTPGRIIDLINGNSLKLSEVQYLVLDEADQMLAVGFEEDVETILETVPSQ 283
L GV VVVGTPGR+ D++ SL+ ++ VLDEAD+ML+ GF++ + I + +P +
Sbjct: 148 ILQAGVHVVVGTPGRVFDMLKRQSLRADNIKMFVLDEADEMLSRGFKDQIYDIFQLLPPK 207
Query: 284 RQTMLFSATMPGWVKKLSRKYLNNPLTIDLVGDEEEKLAEGIKLYALSATSTS-KRTILT 342
Q +FSATMP +++RK+++ P+ I LV +E L EGIK + ++ K L
Sbjct: 208 IQVGVFSATMPPEALEITRKFMSKPVRI-LVKRDELTL-EGIKQFYVNVEKEEWKLETLC 265
Query: 343 DLITVYAKGGKTIVFTQTKRDADEVSLALTS-SITSEALHGDISQHQRERTLNGFRQGKF 401
DL A ++++F T+R D ++ + S T A HGD+ Q+ R+ + FR G
Sbjct: 266 DLYETLAI-TQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSS 324
Query: 402 TVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKLGNAILMYTNSQRRT 461
VL+ TD+ ARG+D+ V L+I+++LP PE ++HR GR+GR G+ G AI T R
Sbjct: 325 RVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERM 384
Query: 462 VRSLER 467
+ +++
Sbjct: 385 LFDIQK 390
>AT3G09620.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:2949152-2952205
REVERSE LENGTH=989
Length = 989
Score = 208 bits (530), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 125/349 (35%), Positives = 196/349 (56%), Gaps = 40/349 (11%)
Query: 108 GLPPRLVESLHNRSITHLFPIQRAVLIPALEGRDIIARAKTGTGKTLAFGIPIIKHITED 167
GL +++++L + PIQ L + GRD I AKTG+GKTL F +P+++HI +D
Sbjct: 402 GLTSKILDTLKKLNYEKPMPIQAQALPIIMSGRDCIGVAKTGSGKTLGFVLPMLRHI-KD 460
Query: 168 EHAVSHRRSAGRLPRVLVLAPTRELARQVEKEIKESAPYLSTVCV--YGGVSYVTQQSAL 225
+ V AG P LV+APTREL +Q+ +I++ + L +CV YGG Q S L
Sbjct: 461 QPPVE----AGDGPIGLVMAPTRELVQQIYSDIRKFSKALGIICVPVYGGSGVAQQISEL 516
Query: 226 TRGVDVVVGTPGRIIDLI---NGNSLKLSEVQYLVLDEADQMLAVGFEEDVETILETVPS 282
RG ++VV TPGR+ID++ +G L V YLV+DEAD+M +GFE + I++ +
Sbjct: 517 KRGTEIVVCTPGRMIDILCTSSGKITNLRRVTYLVMDEADRMFDMGFEPQITRIVQNIRP 576
Query: 283 QRQTMLFSATMPGWVKKLSRKYLNNPLTIDLVGDEEEKLAEGIKLYALSATSTSKRTILT 342
RQT+LFSAT P V+ L+RK LN P+ I + G + + I + + + L
Sbjct: 577 DRQTVLFSATFPRQVETLARKVLNKPVEIQVGG--RSVVNKDITQLVEIRPESERFSRLL 634
Query: 343 DLITVYAKGGKTIVFTQTKRDADEVSLALTSSITSEALHGDISQHQRERTLNGFRQGKFT 402
+L+ + + GK +VF +++ E++++ F+
Sbjct: 635 ELLGEWYEKGKVLVFVRSQ----------------------------EKSISDFKSDVCN 666
Query: 403 VLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKLGNAI 451
+L+AT VAARGLD+ ++L+++++ PN E +VHR GRTGRAG+ G A+
Sbjct: 667 LLIATSVAARGLDVKELELVVNFDAPNHYEDYVHRVGRTGRAGRKGCAV 715
>AT1G54270.1 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-20262018
FORWARD LENGTH=412
Length = 412
Score = 208 bits (529), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 129/366 (35%), Positives = 209/366 (57%), Gaps = 19/366 (5%)
Query: 107 LGLPPRLVESLHNRSITHLFPIQRAVLIPALEGRDIIARAKTGTGKTLAFGIPIIKHITE 166
+GL L+ ++ IQ+ ++P +G D+I +A++GTGKT F +++ +
Sbjct: 44 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQL-- 101
Query: 167 DEHAVSHRRSAGRLPRVLVLAPTRELARQVEKEIKESAPYLST---VCVYGGVSYVTQQS 223
++A+ ++ LVLAPTRELA+Q+EK ++ Y CV GG S Q
Sbjct: 102 -DYALLQCQA-------LVLAPTRELAQQIEKVMRALGDYQGVKVHACV-GGTSVREDQR 152
Query: 224 ALTRGVDVVVGTPGRIIDLINGNSLKLSEVQYLVLDEADQMLAVGFEEDVETILETVPSQ 283
L GV VVVGTPGR+ D++ SL+ ++ VLDEAD+ML+ GF++ + I + +P +
Sbjct: 153 ILQAGVHVVVGTPGRVFDMLRRQSLRPDCIKMFVLDEADEMLSRGFKDQIYDIFQLLPPK 212
Query: 284 RQTMLFSATMPGWVKKLSRKYLNNPLTIDLVGDEEEKLAEGIKLYALSATSTS-KRTILT 342
Q +FSATMP +++RK+++ P+ I LV +E L EGIK + ++ K L
Sbjct: 213 IQVGVFSATMPPEALEITRKFMSKPVRI-LVKRDELTL-EGIKQFYVNVEKEDWKLETLC 270
Query: 343 DLITVYAKGGKTIVFTQTKRDADEVSLALTS-SITSEALHGDISQHQRERTLNGFRQGKF 401
DL A ++++F T+R D ++ + S T A HGD+ Q+ R+ + FR G
Sbjct: 271 DLYETLAI-TQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSS 329
Query: 402 TVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKLGNAILMYTNSQRRT 461
VL+ TD+ ARG+D+ V L+I+++LP PE ++HR GR+GR G+ G AI T +R
Sbjct: 330 RVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFVTLDDQRM 389
Query: 462 VRSLER 467
+ +++
Sbjct: 390 LFDIQK 395
>AT3G19760.1 | Symbols: EIF4A-III | eukaryotic initiation factor
4A-III | chr3:6863790-6866242 FORWARD LENGTH=408
Length = 408
Score = 207 bits (526), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 124/345 (35%), Positives = 198/345 (57%), Gaps = 19/345 (5%)
Query: 128 IQRAVLIPALEGRDIIARAKTGTGKTLAFGIPIIKHITEDEHAVSHRRSAGRLPRVLVLA 187
IQ+ ++P L+GRD+IA+A++GTGKT + + + + ++ R + L+L+
Sbjct: 61 IQQRAVMPILQGRDVIAQAQSGTGKTSMIALSVCQVVD----------TSSREVQALILS 110
Query: 188 PTRELARQVEKEIKE---SAPYLSTVCVYGGVSYVTQQSALTRGVDVVVGTPGRIIDLIN 244
PTRELA Q EK I+ A + C+ GG S L GV VV GTPGR+ D+I
Sbjct: 111 PTRELATQTEKTIQAIGLHANIQAHACI-GGNSVGEDIRKLEHGVHVVSGTPGRVCDMIK 169
Query: 245 GNSLKLSEVQYLVLDEADQMLAVGFEEDVETILETVPSQRQTMLFSATMPGWVKKLSRKY 304
SL+ ++ L+LDE+D+ML+ GF++ + + +P Q L SAT+P + +++ K+
Sbjct: 170 RRSLRTRAIKLLILDESDEMLSRGFKDQIYDVYRYLPPDLQVCLVSATLPHEILEMTSKF 229
Query: 305 LNNPLTIDLVGDEEEKLAEGIKLYALSATSTS-KRTILTDLITVYAKGGKTIVFTQTKRD 363
+ P+ I LV +E L EGIK + ++ K L DL + ++F TKR
Sbjct: 230 MTEPVKI-LVKRDELTL-EGIKQFFVAVEKEEWKFDTLCDLYDTLTIT-QAVIFCNTKRK 286
Query: 364 ADEVSLALTS-SITSEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLI 422
D +S + S + T ++HGD+ Q +R+ +N FR G VL+ TDV ARG+D+ V L+
Sbjct: 287 VDYLSEKMRSHNFTVSSMHGDMPQKERDAIMNEFRSGDSRVLITTDVWARGIDVQQVSLV 346
Query: 423 IHYELPNDPETFVHRSGRTGRAGKLGNAILMYTNSQRRTVRSLER 467
I+Y+LPN+ E ++HR GR+GR G+ G AI + + +R +E+
Sbjct: 347 INYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDIKILRDIEQ 391
>AT1G54270.2 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-20262018
FORWARD LENGTH=407
Length = 407
Score = 206 bits (523), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 126/345 (36%), Positives = 202/345 (58%), Gaps = 19/345 (5%)
Query: 128 IQRAVLIPALEGRDIIARAKTGTGKTLAFGIPIIKHITEDEHAVSHRRSAGRLPRVLVLA 187
IQ+ ++P +G D+I +A++GTGKT F +++ + ++A+ ++ LVLA
Sbjct: 60 IQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQL---DYALLQCQA-------LVLA 109
Query: 188 PTRELARQVEKEIKESAPYLST---VCVYGGVSYVTQQSALTRGVDVVVGTPGRIIDLIN 244
PTRELA+Q+EK ++ Y CV GG S Q L GV VVVGTPGR+ D++
Sbjct: 110 PTRELAQQIEKVMRALGDYQGVKVHACV-GGTSVREDQRILQAGVHVVVGTPGRVFDMLR 168
Query: 245 GNSLKLSEVQYLVLDEADQMLAVGFEEDVETILETVPSQRQTMLFSATMPGWVKKLSRKY 304
SL+ ++ VLDEAD+ML+ GF++ + I + +P + Q +FSATMP +++RK+
Sbjct: 169 RQSLRPDCIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKF 228
Query: 305 LNNPLTIDLVGDEEEKLAEGIKLYALSATSTS-KRTILTDLITVYAKGGKTIVFTQTKRD 363
++ P+ I LV +E L EGIK + ++ K L DL A ++++F T+R
Sbjct: 229 MSKPVRI-LVKRDELTL-EGIKQFYVNVEKEDWKLETLCDLYETLAI-TQSVIFVNTRRK 285
Query: 364 ADEVSLALTS-SITSEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLI 422
D ++ + S T A HGD+ Q+ R+ + FR G VL+ TD+ ARG+D+ V L+
Sbjct: 286 VDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLV 345
Query: 423 IHYELPNDPETFVHRSGRTGRAGKLGNAILMYTNSQRRTVRSLER 467
I+++LP PE ++HR GR+GR G+ G AI T +R + +++
Sbjct: 346 INFDLPTQPENYLHRIGRSGRFGRKGVAINFVTLDDQRMLFDIQK 390
>AT5G60990.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr5:24546601-24549148 REVERSE LENGTH=456
Length = 456
Score = 203 bits (516), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 135/392 (34%), Positives = 214/392 (54%), Gaps = 20/392 (5%)
Query: 106 KLGLPPRLVESLHNRSITHLFPIQRAVLIPALEGRDIIARAKTGTGKTLAFGIPIIKHIT 165
+LG+ LV++ + IQ L ALEG+D+I A+TG+GKT AF IPI++ +
Sbjct: 13 ELGVREELVKACERLGWKNPSKIQAEALPFALEGKDVIGLAQTGSGKTGAFAIPILQALL 72
Query: 166 EDEHAVSHRRSAGRLPR----VLVLAPTRELARQVEKEIKESAPYLSTVC--VYGGVSYV 219
E + GR P VL+PTRELA Q+ ++ + +S C + GG+ +
Sbjct: 73 E--YVYDSEPKKGRRPDPAFFACVLSPTRELAIQIAEQFEALGADISLRCAVLVGGIDRM 130
Query: 220 TQQSALTRGVDVVVGTPGRIID-LINGNSLKLSEVQYLVLDEADQMLAVGFEEDVETILE 278
Q AL + V+V TPGR+ D + + L ++YLVLDEAD++L FE+ + ILE
Sbjct: 131 QQTIALGKRPHVIVATPGRLWDHMSDTKGFSLKSLKYLVLDEADRLLNEDFEKSLNQILE 190
Query: 279 TVPSQRQTMLFSATMPGWVKKLSRKYLNNPLTIDLVGDEE--EKLAEGIKLYALSATSTS 336
+P +R+T LFSATM V+KL R L NP+ I+ + L + + A
Sbjct: 191 EIPLERKTFLFSATMTKKVRKLQRACLRNPVKIEAASKYSTVDTLKQQYRFVAAKYKDCY 250
Query: 337 KRTILTDLITVYAKGGKTIVFTQTKRDADEVSLALTS-SITSEALHGDISQHQRERTLNG 395
IL+++ +++FT+T ++L L S + + G ++Q +R LN
Sbjct: 251 LVYILSEMPE-----STSMIFTRTCDGTRFLALVLRSLGFRAIPISGQMTQSKRLGALNK 305
Query: 396 FRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKLGNAILMYT 455
F+ G+ +LV TDVA+RGLDIP+VD++I+Y++P + + ++HR GRT RAG+ G I +
Sbjct: 306 FKAGECNILVCTDVASRGLDIPSVDVVINYDIPTNSKDYIHRVGRTARAGRSGVGISLVN 365
Query: 456 NSQRRTVRSLERDVGCKF-EFVNPPAMEEVLA 486
+ +E+ +G K E+ P +EVL+
Sbjct: 366 QYELEWYIQIEKLIGKKLPEY--PAEEDEVLS 395
>AT4G00660.1 | Symbols: RH8, ATRH8 | RNAhelicase-like 8 |
chr4:274638-277438 FORWARD LENGTH=505
Length = 505
Score = 203 bits (516), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 124/386 (32%), Positives = 208/386 (53%), Gaps = 24/386 (6%)
Query: 109 LPPRLVESLHNRSITHLFPIQRAVLIPALEGRDIIARAKTGTGKTLAFGIPIIKHITEDE 168
L L+ ++ + PIQ + AL GRDI+ARAK GTGKT AF IP+++ I +D
Sbjct: 138 LKRELLMGIYEKGFERPSPIQEESIPIALTGRDILARAKNGTGKTAAFCIPVLEKIDQDN 197
Query: 169 HAVSHRRSAGRLPRVLVLAPTRELARQVEKEIKESAPYL--STVCVYGGVSYVTQQSALT 226
+ + + +++ PTRELA Q + KE +L + GG S L
Sbjct: 198 NVI----------QAVIIVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLY 247
Query: 227 RGVDVVVGTPGRIIDLINGNSLKLSEVQYLVLDEADQMLAVGFEEDVETILETVPSQRQT 286
+ V ++VGTPGRI+DL L + LV+DEAD++L+ F+ VE ++ +P RQ
Sbjct: 248 QPVHLLVGTPGRILDLTKKGVCVLKDCSVLVMDEADKLLSQEFQPSVEHLISFLPESRQI 307
Query: 287 MLFSATMPGWVKKLSRKYLNNPLTIDLVGDEEEKLAEGI-KLYALSATSTSKRTILTDLI 345
++FSAT P VK ++L NP I+L+ +E +GI + YA +R + L
Sbjct: 308 LMFSATFPVTVKDFKDRFLTNPYVINLM---DELTLKGITQFYAF----VEERQKIHCLN 360
Query: 346 TVYAKG--GKTIVFTQTKRDADEVSLALTS-SITSEALHGDISQHQRERTLNGFRQGKFT 402
T+++K ++I+F + + ++ +T + +H + Q R R + FR G
Sbjct: 361 TLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACR 420
Query: 403 VLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKLGNAILMYTNSQRRTV 462
LV TD+ RG+DI V+++I+++ P + ET++HR GR+GR G LG A+ + T R +
Sbjct: 421 NLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRFGHLGLAVNLITYEDRFNL 480
Query: 463 RSLERDVGCKFEFVNPPAMEEVLAAS 488
+E+++G + + + PP +++ +
Sbjct: 481 YRIEQELGTEIKQI-PPHIDQAIYCQ 505
>AT4G00660.2 | Symbols: RH8, ATRH8 | RNAhelicase-like 8 |
chr4:274638-277438 FORWARD LENGTH=505
Length = 505
Score = 203 bits (516), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 124/386 (32%), Positives = 208/386 (53%), Gaps = 24/386 (6%)
Query: 109 LPPRLVESLHNRSITHLFPIQRAVLIPALEGRDIIARAKTGTGKTLAFGIPIIKHITEDE 168
L L+ ++ + PIQ + AL GRDI+ARAK GTGKT AF IP+++ I +D
Sbjct: 138 LKRELLMGIYEKGFERPSPIQEESIPIALTGRDILARAKNGTGKTAAFCIPVLEKIDQDN 197
Query: 169 HAVSHRRSAGRLPRVLVLAPTRELARQVEKEIKESAPYL--STVCVYGGVSYVTQQSALT 226
+ + + +++ PTRELA Q + KE +L + GG S L
Sbjct: 198 NVI----------QAVIIVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLY 247
Query: 227 RGVDVVVGTPGRIIDLINGNSLKLSEVQYLVLDEADQMLAVGFEEDVETILETVPSQRQT 286
+ V ++VGTPGRI+DL L + LV+DEAD++L+ F+ VE ++ +P RQ
Sbjct: 248 QPVHLLVGTPGRILDLTKKGVCVLKDCSVLVMDEADKLLSQEFQPSVEHLISFLPESRQI 307
Query: 287 MLFSATMPGWVKKLSRKYLNNPLTIDLVGDEEEKLAEGI-KLYALSATSTSKRTILTDLI 345
++FSAT P VK ++L NP I+L+ +E +GI + YA +R + L
Sbjct: 308 LMFSATFPVTVKDFKDRFLTNPYVINLM---DELTLKGITQFYAF----VEERQKIHCLN 360
Query: 346 TVYAKG--GKTIVFTQTKRDADEVSLALTS-SITSEALHGDISQHQRERTLNGFRQGKFT 402
T+++K ++I+F + + ++ +T + +H + Q R R + FR G
Sbjct: 361 TLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACR 420
Query: 403 VLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKLGNAILMYTNSQRRTV 462
LV TD+ RG+DI V+++I+++ P + ET++HR GR+GR G LG A+ + T R +
Sbjct: 421 NLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRFGHLGLAVNLITYEDRFNL 480
Query: 463 RSLERDVGCKFEFVNPPAMEEVLAAS 488
+E+++G + + + PP +++ +
Sbjct: 481 YRIEQELGTEIKQI-PPHIDQAIYCQ 505
>AT1G77030.1 | Symbols: | hydrolases, acting on acid anhydrides, in
phosphorus-containing anhydrides;ATP-dependent
helicases;nucleic acid binding;ATP binding;RNA
binding;helicases | chr1:28947887-28951526 REVERSE
LENGTH=845
Length = 845
Score = 200 bits (509), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 129/384 (33%), Positives = 201/384 (52%), Gaps = 37/384 (9%)
Query: 107 LGLPPRLVESLHNRSITHLFPIQRAVLIPALEGRDIIARAKTGTGKTLAFGIPIIKHITE 166
L L P + ++ + PIQR + L G D++A A+TG+GKT AF IP+++ + +
Sbjct: 33 LNLGPNVFNAIKKKGYKVPTPIQRKTMPLILSGVDVVAMARTGSGKTAAFLIPMLEKLKQ 92
Query: 167 DEHAVSHRRSAGRLPRVLVLAPTRELARQVEKEIKESAPY--LSTVCVYGGVSYVTQQSA 224
H G R L+L+PTR+LA Q K KE + L + GG S Q
Sbjct: 93 ------HVPQGG--VRALILSPTRDLAEQTLKFTKELGKFTDLRVSLLVGGDSMEDQFEE 144
Query: 225 LTRGVDVVVGTPGRIIDLING-NSLKLSEVQYLVLDEADQMLAVGFEEDVETILETVPSQ 283
LT+G DV++ TPGR++ L++ + + L V+Y+V DEAD + +GF E + IL +
Sbjct: 145 LTKGPDVIIATPGRLMHLLSEVDDMTLRTVEYVVFDEADSLFGMGFAEQLHQILTQLSEN 204
Query: 284 RQTMLFSATMPGWVKKLSRKYLNNPLTIDLVGDEEEKLAEGIKLYALSATSTSKRTILTD 343
RQT+LFSAT+P + + ++ L P + L D E K++ +KL L+ K + L
Sbjct: 205 RQTLLFSATLPSALAEFAKAGLREPQLVRL--DVENKISPDLKLSFLTVRPEEKYSALLY 262
Query: 344 LITVY-AKGGKTIVFTQTKRDADEV-SLALTSSITSEALHGDISQHQRERTLNGFRQGKF 401
L+ + + +T++F TK + V SL +I +GD+ Q R+ ++ FR K
Sbjct: 263 LVREHISSDQQTLIFVSTKHHVEFVNSLFKLENIEPSVCYGDMDQDARKIHVSRFRARKT 322
Query: 402 TVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKLGNAILMYTNSQRRT 461
+L+ TD+AARG+DIP +D +I+++ P P+ FVHR GR RAG+
Sbjct: 323 MLLIVTDIAARGIDIPLLDNVINWDFPPRPKIFVHRVGRAARAGR--------------- 367
Query: 462 VRSLERDVGCKFEFVNPPAMEEVL 485
GC + FV P M +L
Sbjct: 368 -------TGCAYSFVTPEDMPYML 384
>AT5G63120.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:25319798-25322071
REVERSE LENGTH=484
Length = 484
Score = 197 bits (500), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 115/309 (37%), Positives = 175/309 (56%), Gaps = 9/309 (2%)
Query: 109 LPPRLVESLHNRSITHLFPIQRAVLIPALEGRDIIARAKTGTGKTLAFGIPIIKHITEDE 168
P ++E++ T PIQ AL+GRD+I A+TG+GKTLA+ +P + H++
Sbjct: 172 FPDNILEAIAKLGFTEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPALVHVS--- 228
Query: 169 HAVSHRRSAGRLPRVLVLAPTRELARQVEKEIKESAPY--LSTVCVYGGVSYVTQQSALT 226
R P VL+LAPTRELA Q+++E ++ + + C+YGG Q L
Sbjct: 229 --AQPRLGQDDGPIVLILAPTRELAVQIQEESRKFGLRSGVRSTCIYGGAPKGPQIRDLR 286
Query: 227 RGVDVVVGTPGRIIDLINGNSLKLSEVQYLVLDEADQMLAVGFEEDVETILETVPSQRQT 286
RGV++V+ TPGR+ID++ L V YLVLDEAD+ML +GFE + I+ + RQT
Sbjct: 287 RGVEIVIATPGRLIDMLECQHTNLKRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQT 346
Query: 287 MLFSATMPGWVKKLSRKYLNNPLTIDLVGDEEEKLAEGIKLYALSATSTSKRTILTDLIT 346
+L+SAT P V+ L+R++L +P ++G + K + I + K L L+
Sbjct: 347 LLWSATWPREVETLARQFLRDPYKA-IIGSTDLKANQSINQVIEIVPTPEKYNRLLTLLK 405
Query: 347 VYAKGGKTIVFTQTKRDADEVSLAL-TSSITSEALHGDISQHQRERTLNGFRQGKFTVLV 405
G K ++F +TKR D+V+ L + A+HGD +Q +R+R L F+ G+ ++
Sbjct: 406 QLMDGSKILIFVETKRGCDQVTRQLRMDGWPALAIHGDKTQSERDRVLAEFKSGRSPIMT 465
Query: 406 ATDVAARGL 414
ATDVAARGL
Sbjct: 466 ATDVAARGL 474
>AT2G45810.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr2:18859836-18862318 FORWARD LENGTH=528
Length = 528
Score = 192 bits (489), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 118/363 (32%), Positives = 193/363 (53%), Gaps = 21/363 (5%)
Query: 113 LVESLHNRSITHLFPIQRAVLIPALEGRDIIARAKTGTGKTLAFGIPIIKHITEDEHAVS 172
L+ ++ + PIQ + AL G DI+ARAK GTGKT AF IP ++ I + + +
Sbjct: 165 LLRGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTGAFCIPTLEKIDPENNVI- 223
Query: 173 HRRSAGRLPRVLVLAPTRELARQVEKEIKESAPYLS--TVCVYGGVSYVTQQSALTRGVD 230
+ ++L PTRELA Q + KE + YL + GG S L + V
Sbjct: 224 ---------QAVILVPTRELALQTSQVCKELSKYLKIEVMVTTGGTSLRDDIMRLYQPVH 274
Query: 231 VVVGTPGRIIDLINGNSLKLSEVQYLVLDEADQMLAVGFEEDVETILETVPSQRQTMLFS 290
++VGTPGRI+DL L + LV+DEAD++L+V F+ +E +++ +P RQ ++FS
Sbjct: 275 LLVGTPGRILDLAKKGVCVLKDCAMLVMDEADKLLSVEFQPSIEELIQFLPESRQILMFS 334
Query: 291 ATMPGWVKKLSRKYLNNPLTIDLVGDEEEKLAEGIKLYALSATSTSKRTILTDLITVYAK 350
AT P VK +YL P I+L+ ++ L + YA +R + L T+++K
Sbjct: 335 ATFPVTVKSFKDRYLKKPYIINLM--DQLTLMGVTQYYAF----VEERQKVHCLNTLFSK 388
Query: 351 G--GKTIVFTQTKRDADEVSLALTS-SITSEALHGDISQHQRERTLNGFRQGKFTVLVAT 407
++I+F + + ++ +T + +H + Q R R + FR G LV T
Sbjct: 389 LQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMVQDHRNRVFHDFRNGACRNLVCT 448
Query: 408 DVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKLGNAILMYTNSQRRTVRSLER 467
D+ RG+DI V+++I+++ P E+++HR GR+GR G LG A+ + T R + E+
Sbjct: 449 DLFTRGIDIQAVNVVINFDFPRTSESYLHRVGRSGRFGHLGLAVNLVTYEDRFKMYQTEQ 508
Query: 468 DVG 470
++G
Sbjct: 509 ELG 511
>AT1G28180.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:9843084-9845002
REVERSE LENGTH=614
Length = 614
Score = 192 bits (487), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 120/344 (34%), Positives = 185/344 (53%), Gaps = 29/344 (8%)
Query: 134 IP-ALEGRDIIARAKTGTGKTLAFGIPIIKHITEDEHAVSHRRSAGRLPRVLVLAPTREL 192
IP LE RD+I + TG+GKT AF +P++ +I+ ++ G P LV+ PTREL
Sbjct: 233 IPLGLEQRDVIGISATGSGKTAAFVLPMLAYISRLPPMREENQTEG--PYALVMVPTREL 290
Query: 193 ARQVEKEIKESAPYL--STVCVYGGVSYVTQQSALTRGVDVVVGTPGRIIDLINGNSLKL 250
A Q+E+E + + YL V + G S Q L++G ++V+ TPGR++D + + L
Sbjct: 291 AHQIEEETVKFSRYLGFKAVSITGWESIEKQALKLSQGCEIVIATPGRLLDCLERRYVVL 350
Query: 251 SEVQYLVLDEADQMLAVGFEEDVETILETVPSQ-----------------RQTMLFSATM 293
++ YLVLDEAD+M+ + FE V +L+ +P R T +FSATM
Sbjct: 351 NQCNYLVLDEADRMIDMDFEPQVSEVLDVMPCSNLKPEKEDEELEEKKIYRTTYMFSATM 410
Query: 294 PGWVKKLSRKYLNNPLTIDLVGDEEEKLAEGIKLYALSATSTSKRTILTDLITVYAKGGK 353
V++L+RK+L NP+ + +G+ + + + + + + K + L LI
Sbjct: 411 LLSVERLARKFLRNPVVV-TIGETTKFITQQV----IMTKESDKFSRLKKLIDDLGDDKT 465
Query: 354 TIVFTQTKRDADEV--SLALTSSITSEALHGDISQHQRERTLNGFRQGKFTVLVATDVAA 411
IVF T+ D + +L LH SQ QR+ +L F++ +F VLV TDV
Sbjct: 466 AIVFVNTRNKVDYIVKNLEKVGRCRVTTLHAGKSQEQRDYSLEEFKKKRFNVLVTTDVLG 525
Query: 412 RGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKLGNAILMYT 455
RGLDI ++ +I+Y++PN + + HR GRTGRAGK G A T
Sbjct: 526 RGLDILDLAQVINYDMPNTMDLYTHRIGRTGRAGKTGVATTFLT 569
>AT3G18600.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:6399724-6403007
REVERSE LENGTH=568
Length = 568
Score = 191 bits (486), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 131/385 (34%), Positives = 207/385 (53%), Gaps = 22/385 (5%)
Query: 89 GNGFLSDSPTADELDVTKLGLPPRLVESLHNRSITHLFPIQRAVLIPALEGRDIIARAKT 148
G G +++ T D LD L + ++ ++ IQ + P LEG+D++ A+T
Sbjct: 82 GKGIMTNV-TFDSLD-----LSEQTSIAIKEMGFQYMTQIQAGSIQPLLEGKDVLGAART 135
Query: 149 GTGKTLAFGIPIIKHITEDEHAVSHRRSAGRLPRVLVLAPTRELARQVEKEIKESAPYLS 208
G+GKTLAF IP ++ + ++ S R G V+V+ PTRELA Q + +E + S
Sbjct: 136 GSGKTLAFLIPAVELLFKER--FSPRNGTG----VIVICPTRELAIQTKNVAEELLKHHS 189
Query: 209 TVC--VYGGVSYVTQQSALTRGVDVVVGTPGRIID-LINGNSLKLSEVQYLVLDEADQML 265
V GG + ++ + G ++V+ TPGR++D L N + ++ LV+DEAD++L
Sbjct: 190 QTVSMVIGGNNRRSEAQRIASGSNLVIATPGRLLDHLQNTKAFIYKHLKCLVIDEADRIL 249
Query: 266 AVGFEEDVETILETVPSQRQTMLFSATMPGWVKKLSRKYLNNPLTIDLVGDEEEKLAEGI 325
FEED+ IL+ +P RQT LFSAT VK L+R L +P+ +D+ + EG+
Sbjct: 250 EENFEEDMNKILKILPKTRQTALFSATQTSKVKDLARVSLTSPVHVDVDDGRRKVTNEGL 309
Query: 326 KLYALSATSTSKRTILTDLITVYAKG--GKTIVFTQTKRDAD-EVSLALTSSITSEALHG 382
+ + +R IL LI+ K K +VF T + + S + +HG
Sbjct: 310 E-QGYCVVPSKQRLIL--LISFLKKNLNKKIMVFFSTCKSVQFHTEIMKISDVDVSDIHG 366
Query: 383 DISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTG 442
+ Q++R +T F + K +L+ TDVAARGLDIP+VD II Y+ P+ P ++HR GRT
Sbjct: 367 GMDQNRRTKTFFDFMKAKKGILLCTDVAARGLDIPSVDWIIQYDPPDKPTEYIHRVGRTA 426
Query: 443 RA-GKLGNAILMYTNSQRRTVRSLE 466
R G G A+L+ + + +R L+
Sbjct: 427 RGEGAKGKALLVLIPEELQFIRYLK 451
>AT3G61240.2 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:22666590-22669154 FORWARD LENGTH=498
Length = 498
Score = 190 bits (482), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 116/363 (31%), Positives = 195/363 (53%), Gaps = 21/363 (5%)
Query: 113 LVESLHNRSITHLFPIQRAVLIPALEGRDIIARAKTGTGKTLAFGIPIIKHITEDEHAVS 172
L++ ++ + PIQ + AL G DI+ARAK GTGKT AF IP+++ I + + +
Sbjct: 135 LLKGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTGAFCIPVLEKIDPNNNVI- 193
Query: 173 HRRSAGRLPRVLVLAPTRELARQVEKEIKESAPYLS--TVCVYGGVSYVTQQSALTRGVD 230
+ ++L PTRELA Q + KE + YL+ + GG S L + V
Sbjct: 194 ---------QAMILVPTRELALQTSQVCKELSKYLNIQVMVTTGGTSLRDDIMRLHQPVH 244
Query: 231 VVVGTPGRIIDLINGNSLKLSEVQYLVLDEADQMLAVGFEEDVETILETVPSQRQTMLFS 290
++VGTPGRI+DL L + LV+DEAD++L+ F+ +E +++ +P RQ ++FS
Sbjct: 245 LLVGTPGRILDLTKKGVCVLKDCAMLVMDEADKLLSAEFQPSLEELIQFLPQNRQFLMFS 304
Query: 291 ATMPGWVKKLSRKYLNNPLTIDLVGDEEEKLAEGIKLYALSATSTSKRTILTDLITVYAK 350
AT P VK ++L P I+L+ ++ L + YA +R + L T+++K
Sbjct: 305 ATFPVTVKAFKDRHLRKPYVINLM--DQLTLMGVTQYYAF----VEERQKVHCLNTLFSK 358
Query: 351 G--GKTIVFTQTKRDADEVSLALTS-SITSEALHGDISQHQRERTLNGFRQGKFTVLVAT 407
++I+F + + ++ +T + +H + Q R R + FR G LV T
Sbjct: 359 LQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMVQDHRNRVFHEFRNGACRNLVCT 418
Query: 408 DVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKLGNAILMYTNSQRRTVRSLER 467
D+ RG+DI V+++I+++ P E+++HR GR+GR G LG A+ + T R + E+
Sbjct: 419 DLFTRGIDIQAVNVVINFDFPRTSESYLHRVGRSGRFGHLGLAVNLVTYEDRFKMYQTEQ 478
Query: 468 DVG 470
++G
Sbjct: 479 ELG 481
>AT3G61240.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:22666590-22669154 FORWARD LENGTH=498
Length = 498
Score = 190 bits (482), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 116/363 (31%), Positives = 195/363 (53%), Gaps = 21/363 (5%)
Query: 113 LVESLHNRSITHLFPIQRAVLIPALEGRDIIARAKTGTGKTLAFGIPIIKHITEDEHAVS 172
L++ ++ + PIQ + AL G DI+ARAK GTGKT AF IP+++ I + + +
Sbjct: 135 LLKGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTGAFCIPVLEKIDPNNNVI- 193
Query: 173 HRRSAGRLPRVLVLAPTRELARQVEKEIKESAPYLS--TVCVYGGVSYVTQQSALTRGVD 230
+ ++L PTRELA Q + KE + YL+ + GG S L + V
Sbjct: 194 ---------QAMILVPTRELALQTSQVCKELSKYLNIQVMVTTGGTSLRDDIMRLHQPVH 244
Query: 231 VVVGTPGRIIDLINGNSLKLSEVQYLVLDEADQMLAVGFEEDVETILETVPSQRQTMLFS 290
++VGTPGRI+DL L + LV+DEAD++L+ F+ +E +++ +P RQ ++FS
Sbjct: 245 LLVGTPGRILDLTKKGVCVLKDCAMLVMDEADKLLSAEFQPSLEELIQFLPQNRQFLMFS 304
Query: 291 ATMPGWVKKLSRKYLNNPLTIDLVGDEEEKLAEGIKLYALSATSTSKRTILTDLITVYAK 350
AT P VK ++L P I+L+ ++ L + YA +R + L T+++K
Sbjct: 305 ATFPVTVKAFKDRHLRKPYVINLM--DQLTLMGVTQYYAF----VEERQKVHCLNTLFSK 358
Query: 351 G--GKTIVFTQTKRDADEVSLALTS-SITSEALHGDISQHQRERTLNGFRQGKFTVLVAT 407
++I+F + + ++ +T + +H + Q R R + FR G LV T
Sbjct: 359 LQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMVQDHRNRVFHEFRNGACRNLVCT 418
Query: 408 DVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKLGNAILMYTNSQRRTVRSLER 467
D+ RG+DI V+++I+++ P E+++HR GR+GR G LG A+ + T R + E+
Sbjct: 419 DLFTRGIDIQAVNVVINFDFPRTSESYLHRVGRSGRFGHLGLAVNLVTYEDRFKMYQTEQ 478
Query: 468 DVG 470
++G
Sbjct: 479 ELG 481
>AT5G65900.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr5:26358328-26361244 FORWARD LENGTH=633
Length = 633
Score = 189 bits (480), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 125/365 (34%), Positives = 192/365 (52%), Gaps = 11/365 (3%)
Query: 107 LGLPPRLVESLHNRSITHLFPIQRAVLIPALEGRDIIARAKTGTGKTLAFGIPIIKHITE 166
L L +S+ + IQ + P + G D++ A+TG+GKTLAF IP ++ +
Sbjct: 159 LSLSDNTYKSIKEMGFARMTQIQAKAIPPLMMGEDVLGAARTGSGKTLAFLIPAVELLYR 218
Query: 167 DEHAVSHRRSAGRLPRVLVLAPTRELARQVEKEIKESAPYLSTVC--VYGGVSYVTQQSA 224
+ + R G VLV+ PTRELA Q KE Y S V GG T+
Sbjct: 219 VK--FTPRNGTG----VLVICPTRELAIQSYGVAKELLKYHSQTVGKVIGGEKRKTEAEI 272
Query: 225 LTRGVDVVVGTPGRIID-LINGNSLKLSEVQYLVLDEADQMLAVGFEEDVETILETVPSQ 283
L +GV+++V TPGR++D L N N +++LV+DEAD++L FEED++ IL +P
Sbjct: 273 LAKGVNLLVATPGRLLDHLENTNGFIFKNLKFLVMDEADRILEQNFEEDLKKILNLLPKT 332
Query: 284 RQTMLFSATMPGWVKKLSRKYLNNPLTIDLVGDEEEKLAEGIKL-YALSATSTSKRTILT 342
RQT LFSAT V+ L+R L +P+ ID+ +E EG++ Y + ++ +LT
Sbjct: 333 RQTSLFSATQSAKVEDLARVSLTSPVYIDVDEGRKEVTNEGLEQGYCVVPSAMRLLFLLT 392
Query: 343 DLITVYAKGGKTIVFTQTKRDADEVSLALTSSITSEALHGDISQHQRERTLNGFRQGKFT 402
L K + F+ K L + G I Q++R T F + +
Sbjct: 393 FLKRFQGKKKIMVFFSTCKSTKFHAELFRYIKFDCLEIRGGIDQNKRTPTFLQFIKAETG 452
Query: 403 VLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRA-GKLGNAILMYTNSQRRT 461
+L+ T+VAARGLD P+VD I+ Y+ P++P ++HR GRT R G G A+L+ T + +
Sbjct: 453 ILLCTNVAARGLDFPHVDWIVQYDPPDNPTDYIHRVGRTARGEGAKGKALLVLTPQELKF 512
Query: 462 VRSLE 466
++ L+
Sbjct: 513 IQYLK 517
>AT5G08610.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:2790341-2794059
FORWARD LENGTH=850
Length = 850
Score = 183 bits (464), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 125/358 (34%), Positives = 193/358 (53%), Gaps = 16/358 (4%)
Query: 109 LPPRLVESLHNRSITHLFPIQRAVLIPALEGRDIIARAKTGTGKTLAFGIPIIKHITEDE 168
L P ++++ + + +Q A L L+G+D++A+AKTGTGKT+AF +P I+ + +
Sbjct: 389 LSPLSLKAIKDAGFETMTVVQEATLPIILQGKDVLAKAKTGTGKTVAFLLPAIEAVIKSP 448
Query: 169 HAVSHRRSAGRLPRVLVLAPTRELARQVEKE---IKESAPYLSTVCVYGGVSYVTQQSAL 225
A R + VLV+ PTRELA Q E + + P + V GG T+Q +
Sbjct: 449 PASRDSRQPPII--VLVVCPTRELASQAAAEANTLLKYHPSIGVQVVIGGTKLPTEQRRM 506
Query: 226 -TRGVDVVVGTPGRIIDLI---NGNSLKLSEVQYLVLDEADQMLAVGFEEDVETILETVP 281
T ++V TPGR+ D I +G + +L V+ LVLDEAD +L +GF D+E I+ VP
Sbjct: 507 QTNPCQILVATPGRLKDHIENTSGFATRLMGVKVLVLDEADHLLDMGFRRDIERIIAAVP 566
Query: 282 SQRQTMLFSATMPGWVKKLSRKYLNNPLT-IDLV----GDEEEKLAEGIKLYALSATSTS 336
QRQT LFSAT+P V+++ L I+ V G+ +K+ + + +L +
Sbjct: 567 KQRQTFLFSATVPEEVRQICHVALKRDHEFINCVQEGSGETHQKVTQMYMIASLDRHFSL 626
Query: 337 KRTILTDLITVYAKGGKTIVFTQTKRDADEVSLALTS-SITSEALHGDISQHQRERTLNG 395
+L + I K I+F T V+ L+ S+ +H Q R R +
Sbjct: 627 LHVLLKEHIADNVDY-KVIIFCTTAMVTRLVADLLSQLSLNVREIHSRKPQSYRTRVSDE 685
Query: 396 FRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKLGNAILM 453
FR+ K +LV +DV+ARG+D P+V L++ LP+D E ++HR GRTGR GK G +L+
Sbjct: 686 FRKSKAIILVTSDVSARGVDYPDVSLVVQMGLPSDREQYIHRLGRTGRKGKEGEGVLL 743
>AT5G05450.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:1612077-1615195
FORWARD LENGTH=593
Length = 593
Score = 182 bits (462), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 118/368 (32%), Positives = 191/368 (51%), Gaps = 40/368 (10%)
Query: 113 LVESLHNRSITHLFPIQRAVLIPALEGRDIIARAKTGTGKTLAFGIPIIKHITEDEHAVS 172
++E+L+ P+Q A + +D+ A TG+GKTLAF +P+++ +
Sbjct: 27 IIEALNQSDFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEIL-------- 78
Query: 173 HRRSAGRLPRV-----LVLAPTRELARQVEKEIKESAPYLST------VCVYGGVSYVTQ 221
RRS P+ ++++PTREL+ Q+ + P++ST V + GG
Sbjct: 79 -RRSTSFPPKPHQVMGVIISPTRELSTQI---YNVAQPFVSTLANVNSVLLVGGREVKAD 134
Query: 222 QSALTR-GVDVVVGTPGRIIDLINGNS-LKLSEVQYLVLDEADQMLAVGFEEDVETILET 279
+ G +V++GTPGR+ D++ L ++ L+LDEAD++L +GF+ V I+
Sbjct: 135 MKIIEEEGCNVLIGTPGRLSDIMERMEILDFRNLEILILDEADRLLEMGFQRQVNYIISR 194
Query: 280 VPSQRQTMLFSATMPGWVKKLSRKYLNNPLTIDLVGDEEE---------KLAEGIKLYAL 330
+P QR+T LFSAT V++L++ L NP+ +++ + K G+ L +
Sbjct: 195 LPKQRRTGLFSATQTEGVEELAKAGLRNPVRVEVRAKSKSESSQQLTNSKTPSGLHLEYM 254
Query: 331 SATSTSKRTILTDLITVYAKGGKTIVFTQTKRDADEVSLALTS-----SITSEALHGDIS 385
+ K + L DL+ + K IVF T D L L+ SI+ +HGD+
Sbjct: 255 ECEADKKSSQLVDLL-IKNSDKKLIVFFMTCASVDYWGLVLSKIPALKSISLIPIHGDMK 313
Query: 386 QHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAG 445
Q+ R++ L F + L+ TDVAARGLDIP +D ++ Y+ P DP F HR+GRT R G
Sbjct: 314 QNARDKALASFTKASSGALLCTDVAARGLDIPGIDYVVQYDPPQDPNMFNHRAGRTARLG 373
Query: 446 KLGNAILM 453
+ G AI+
Sbjct: 374 RQGRAIVF 381
>AT5G11170.1 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3553334-3556646 FORWARD LENGTH=427
Length = 427
Score = 181 bits (458), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 110/348 (31%), Positives = 176/348 (50%), Gaps = 16/348 (4%)
Query: 109 LPPRLVESLHNRSITHLFPIQRAVLIPALEGRDIIARAKTGTGKTLAFGIPIIKHITEDE 168
L P L+ ++ + H +Q + A+ G D+I +AK+G GKT F + ++ I
Sbjct: 53 LKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPSP 112
Query: 169 HAVSHRRSAGRLPRVLVLAPTRELARQVEKEIKESAPYLSTVCV---YGGVSYVTQQSAL 225
VS LVL TRELA Q+ E + YL V YGGV+ + L
Sbjct: 113 GQVS----------ALVLCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNIKIHKDLL 162
Query: 226 TRGV-DVVVGTPGRIIDLINGNSLKLSEVQYLVLDEADQML-AVGFEEDVETILETVPSQ 283
+VVGTPGR++ L L L V++ +LDE D+ML ++ DV+ I + P
Sbjct: 163 KNECPHIVVGTPGRVLALAREKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHD 222
Query: 284 RQTMLFSATMPGWVKKLSRKYLNNPLTIDLVGDEEEKLAEGIKLYALSATSTSKRTILTD 343
+Q M+FSAT+ ++ + +K++ +P+ I V DE + G+ + + + K L D
Sbjct: 223 KQVMMFSATLSKEIRPVCKKFMQDPMEI-YVDDEAKLTLHGLVQHYIKLSEMEKNRKLND 281
Query: 344 LITVYAKGGKTIVFTQTKRDADEVSLALTSSITSEALHGDISQHQRERTLNGFRQGKFTV 403
L+ I R A+ L + + S +H +SQ +R F++G +
Sbjct: 282 LLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKSFKEGHKRI 341
Query: 404 LVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKLGNAI 451
LVATD+ RG+DI V+++I+Y++P+ +T++HR GR GR G G AI
Sbjct: 342 LVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAI 389
>AT5G11200.1 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3567389-3570686 FORWARD LENGTH=427
Length = 427
Score = 181 bits (458), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 110/348 (31%), Positives = 176/348 (50%), Gaps = 16/348 (4%)
Query: 109 LPPRLVESLHNRSITHLFPIQRAVLIPALEGRDIIARAKTGTGKTLAFGIPIIKHITEDE 168
L P L+ ++ + H +Q + A+ G D+I +AK+G GKT F + ++ I
Sbjct: 53 LKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPSP 112
Query: 169 HAVSHRRSAGRLPRVLVLAPTRELARQVEKEIKESAPYLSTVCV---YGGVSYVTQQSAL 225
VS LVL TRELA Q+ E + YL V YGGV+ + L
Sbjct: 113 GQVS----------ALVLCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNIKIHKDLL 162
Query: 226 TRGV-DVVVGTPGRIIDLINGNSLKLSEVQYLVLDEADQML-AVGFEEDVETILETVPSQ 283
+VVGTPGR++ L L L V++ +LDE D+ML ++ DV+ I + P
Sbjct: 163 KNECPHIVVGTPGRVLALAREKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHD 222
Query: 284 RQTMLFSATMPGWVKKLSRKYLNNPLTIDLVGDEEEKLAEGIKLYALSATSTSKRTILTD 343
+Q M+FSAT+ ++ + +K++ +P+ I V DE + G+ + + + K L D
Sbjct: 223 KQVMMFSATLSKEIRPVCKKFMQDPMEI-YVDDEAKLTLHGLVQHYIKLSEMEKNRKLND 281
Query: 344 LITVYAKGGKTIVFTQTKRDADEVSLALTSSITSEALHGDISQHQRERTLNGFRQGKFTV 403
L+ I R A+ L + + S +H +SQ +R F++G +
Sbjct: 282 LLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKSFKEGHKRI 341
Query: 404 LVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKLGNAI 451
LVATD+ RG+DI V+++I+Y++P+ +T++HR GR GR G G AI
Sbjct: 342 LVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAI 389
>AT5G08620.1 | Symbols: STRS2, ATRH25 | DEA(D/H)-box RNA helicase
family protein | chr5:2794540-2797548 FORWARD LENGTH=563
Length = 563
Score = 180 bits (456), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 125/358 (34%), Positives = 191/358 (53%), Gaps = 16/358 (4%)
Query: 109 LPPRLVESLHNRSITHLFPIQRAVLIPALEGRDIIARAKTGTGKTLAFGIPIIKHITEDE 168
L P ++ + + + +Q A L L+G+DI+A+AKTGTGKT+AF +P I+ + +
Sbjct: 87 LSPLTLKGIEDAGFKTMTVVQEATLPLILQGKDILAKAKTGTGKTVAFLLPSIEAVIKAP 146
Query: 169 HAVSHRRSAGRLPRVLVLAPTRELARQVEKE---IKESAPYLSTVCVYGGVSYVTQQSAL 225
A R + VLV+ PTRELA Q E + + P + V GG T+Q L
Sbjct: 147 PASRDNRHPPII--VLVVCPTRELACQAAAEANILLKYHPSIGVQVVIGGTKLPTEQRRL 204
Query: 226 TRG-VDVVVGTPGRI---IDLINGNSLKLSEVQYLVLDEADQMLAVGFEEDVETILETVP 281
+ ++V TPGR+ ID +G + +L V+ LVLDEAD +L +GF ++E I+ VP
Sbjct: 205 QKSPCQILVATPGRLKDHIDNTSGFATRLMGVKVLVLDEADHLLDMGFRREIERIIAAVP 264
Query: 282 SQRQTMLFSATMPGWVKK-----LSRKYLNNPLTIDLVGDEEEKLAEGIKLYALSATSTS 336
QRQT LFSAT+ V++ L R + + G+ +K+++ + +L +
Sbjct: 265 KQRQTFLFSATVSDEVRQICHVALKRDHEFVNCVQEGAGETHQKVSQMYMIASLDRHFSL 324
Query: 337 KRTILTDLITVYAKGGKTIVFTQTKRDADEVSLALTS-SITSEALHGDISQHQRERTLNG 395
+L IT G K I+F T V+ L S+ +H Q R R +
Sbjct: 325 LYGLLKKHITDNV-GYKVIIFCTTAMVTRLVADLLGKLSLNVREIHSRKPQSYRTRVSDE 383
Query: 396 FRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKLGNAILM 453
FR+ K +LV +DV+ARG+D P+V L++ LP+D E ++HR GRTGR GK G +L+
Sbjct: 384 FRKSKSIILVTSDVSARGVDYPDVSLVVQMGLPSDREQYIHRLGRTGRKGKEGEGVLL 441
>AT1G71370.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:26897235-26899381 REVERSE LENGTH=558
Length = 558
Score = 179 bits (453), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 119/357 (33%), Positives = 189/357 (52%), Gaps = 27/357 (7%)
Query: 113 LVESLHNRSITHLFPIQRAVLIPAL-EGRDIIARAKTGTGKTLAFGIPIIKHITEDEHAV 171
++E+L P+Q A IP L +D++ A TG+GKTLAF +P I+ I
Sbjct: 27 IIEALDRSGFEVCTPVQ-AETIPFLCSHKDVVVDAATGSGKTLAFLLPFIEII------- 78
Query: 172 SHRRSAGRLPRV-----LVLAPTRELARQVEKEIK---ESAPYLSTVCVYGGVSYVTQQS 223
RRS P+ ++++PTREL+ Q+ K + + P +++V + GG +
Sbjct: 79 --RRSNSYPPKPHQVMGVIISPTRELSAQIHKVAEPFVSTLPNVNSVLLVGGREVEADMN 136
Query: 224 ALTR-GVDVVVGTPGRIIDLINGNS-LKLSEVQYLVLDEADQMLAVGFEEDVETILETVP 281
L G ++++GTPGR+ D++ L ++ L+LDEAD++L +GF++ V I+ +P
Sbjct: 137 TLEEEGANLLIGTPGRLSDMMKRMEFLDFRNLEILILDEADRLLDMGFQKQVNYIISRLP 196
Query: 282 SQRQTMLFSATMPGWVKKLSRKYLNNPLTIDLVGDEEEKLAEGIKLYALSATSTSKRTIL 341
QR+T LFSAT V L++ L N + + + + K + G+ L + K + L
Sbjct: 197 KQRRTGLFSATQTQAVADLAKAGLRNAMEVISGAESKSKTSSGLYCEYLKCEADQKSSQL 256
Query: 342 TDLITVYAKGGKTIVFTQTKRDADEVSLALTS-----SITSEALHGDISQHQRERTLNGF 396
L+ + K K +VF T D L L+ SI+ + HG + Q R+ L F
Sbjct: 257 VHLL-IENKNKKLVVFFMTCACVDYWGLVLSKIPTLKSISFFSTHGKMDQKGRDTALASF 315
Query: 397 RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKLGNAILM 453
+ VL+ TDVAARGLDIP +D ++ Y+ P DP+ F+HR GRT R + G AI+
Sbjct: 316 TEASSGVLLCTDVAARGLDIPGIDYVVQYDPPQDPDVFIHRVGRTARMERQGRAIVF 372
>AT5G63630.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:25472598-25476402
REVERSE LENGTH=788
Length = 788
Score = 175 bits (443), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 121/357 (33%), Positives = 189/357 (52%), Gaps = 14/357 (3%)
Query: 109 LPPRLVESLHNRSITHLFPIQRAVLIPALEGRDIIARAKTGTGKTLAFGIPIIKHITEDE 168
L P ++++ + + +Q A L L+G+D++A+AKTGTGKT+AF +P I+ + +
Sbjct: 327 LSPLSLKAIKDAGYETMTVVQEATLPIILKGKDVLAKAKTGTGKTVAFLLPSIEVVVKSP 386
Query: 169 HAVSHRRSAGRLPRVLVLAPTRELARQVEKE---IKESAPYLSTVCVYGGVSYVTQQSAL 225
+ L LV+ PTRELA Q E + + P + V GG +Q +
Sbjct: 387 PTSPDNKRPPIL--ALVICPTRELANQAATEANTLLKYHPSIGVQVVIGGTRLGLEQKRM 444
Query: 226 -TRGVDVVVGTPGRIIDLIN---GNSLKLSEVQYLVLDEADQMLAVGFEEDVETILETVP 281
T ++V TPGR+ D I G + +L V+ LVLDEAD +L +GF +D+E I+ VP
Sbjct: 445 QTNPCQILVATPGRLKDHIENTPGFATRLKGVKVLVLDEADHLLDMGFRKDIERIISAVP 504
Query: 282 SQRQTMLFSATMPGWVKKLSRKYLNNPLT-IDLVGDEEEKLAEGIKLYALSATSTSKRTI 340
+RQT LFSAT+P V+++ L ++ V + + + ++ + A+ ++
Sbjct: 505 KERQTFLFSATVPEEVRQICLVALRRDHEFVNCVHEGTIETHQQVRQMHMIASLDRHFSL 564
Query: 341 LTDLITVYAKGG---KTIVFTQTKRDADEVSLALTS-SITSEALHGDISQHQRERTLNGF 396
L L+ + G K IVF T V+ L ++ +H Q R R N F
Sbjct: 565 LYTLLREHIMGNVDYKVIVFCTTAMVTKLVADLLGELNLNVREIHSRKPQSYRTRVSNEF 624
Query: 397 RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKLGNAILM 453
R+ K +LV +DV+ARG+D P+V L++ LP D E ++HR GRTGR GK G IL+
Sbjct: 625 RKSKGLILVTSDVSARGVDYPDVTLVLQVGLPKDREQYIHRLGRTGRKGKEGEGILL 681
>AT3G02065.3 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:359136-360734
FORWARD LENGTH=505
Length = 505
Score = 173 bits (439), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 115/366 (31%), Positives = 191/366 (52%), Gaps = 16/366 (4%)
Query: 102 LDVTKLGLPPRLVESLHNRSITHLFPIQRAVLIPALEGRDIIARAKTGTGKTLAFGIPII 161
L T GLPP+L+ +L PIQ + AL G+ ++A A TG+GKT +F +PII
Sbjct: 110 LTFTSCGLPPKLLLNLETAGYDFPTPIQMQAIPAALTGKSLLASADTGSGKTASFLVPII 169
Query: 162 KHIT--EDEHAVSHRRSAGRLPRVLVLAPTRELARQVEKEIK---ESAPYLSTVCVYGGV 216
T EH RR+ P +VLAPTREL QVE + K + P+ T V GG
Sbjct: 170 SRCTTYHSEHPSDQRRN----PLAMVLAPTRELCVQVEDQAKMLGKGLPF-KTALVVGGD 224
Query: 217 SYVTQQSALTRGVDVVVGTPGRIIDLINGNSLKLSEVQYLVLDEADQMLAVGFEEDVETI 276
Q + +GV++++GTPGR++DL++ ++++L + VLDE D ML GF + V I
Sbjct: 225 PMSGQLYRIQQGVELIIGTPGRVVDLLSKHTIELDNIMTFVLDEVDCMLQRGFRDQVMQI 284
Query: 277 LETVPSQRQTMLFSATMPGWVKKLSRKYLNNPLTIDLVGDEEEKLAEGIKLYALSATSTS 336
+ + SQ Q +LFSAT+ V+K+ + + + K + + A+ +
Sbjct: 285 FQAL-SQPQVLLFSATISREVEKVGGSLAKEIILVSI--GNPNKPNKAVNQLAIWVDAKQ 341
Query: 337 KRTILTDLITVYAK-GGKTIVFTQTKRDADEVSLALT--SSITSEALHGDISQHQRERTL 393
K+ L D++ +V+ ++ AD ++ A+T + + + ++HG+ +R +
Sbjct: 342 KKQKLFDILRSQNHFKPPAVVYVSSRVGADLLANAITVVTGVKALSIHGEKPMKERRDVM 401
Query: 394 NGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKLGNAILM 453
F G+ VLV+T V RG+D+ V +I +++P+ + ++H GR R G+ G AI+
Sbjct: 402 GSFLGGEVPVLVSTGVLGRGVDLLVVRQVIVFDMPSTIKEYIHVIGRASRMGEKGTAIVF 461
Query: 454 YTNSQR 459
R
Sbjct: 462 VNEDDR 467
>AT3G02065.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:359136-360734
FORWARD LENGTH=505
Length = 505
Score = 173 bits (439), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 115/366 (31%), Positives = 191/366 (52%), Gaps = 16/366 (4%)
Query: 102 LDVTKLGLPPRLVESLHNRSITHLFPIQRAVLIPALEGRDIIARAKTGTGKTLAFGIPII 161
L T GLPP+L+ +L PIQ + AL G+ ++A A TG+GKT +F +PII
Sbjct: 110 LTFTSCGLPPKLLLNLETAGYDFPTPIQMQAIPAALTGKSLLASADTGSGKTASFLVPII 169
Query: 162 KHIT--EDEHAVSHRRSAGRLPRVLVLAPTRELARQVEKEIK---ESAPYLSTVCVYGGV 216
T EH RR+ P +VLAPTREL QVE + K + P+ T V GG
Sbjct: 170 SRCTTYHSEHPSDQRRN----PLAMVLAPTRELCVQVEDQAKMLGKGLPF-KTALVVGGD 224
Query: 217 SYVTQQSALTRGVDVVVGTPGRIIDLINGNSLKLSEVQYLVLDEADQMLAVGFEEDVETI 276
Q + +GV++++GTPGR++DL++ ++++L + VLDE D ML GF + V I
Sbjct: 225 PMSGQLYRIQQGVELIIGTPGRVVDLLSKHTIELDNIMTFVLDEVDCMLQRGFRDQVMQI 284
Query: 277 LETVPSQRQTMLFSATMPGWVKKLSRKYLNNPLTIDLVGDEEEKLAEGIKLYALSATSTS 336
+ + SQ Q +LFSAT+ V+K+ + + + K + + A+ +
Sbjct: 285 FQAL-SQPQVLLFSATISREVEKVGGSLAKEIILVSI--GNPNKPNKAVNQLAIWVDAKQ 341
Query: 337 KRTILTDLITVYAK-GGKTIVFTQTKRDADEVSLALT--SSITSEALHGDISQHQRERTL 393
K+ L D++ +V+ ++ AD ++ A+T + + + ++HG+ +R +
Sbjct: 342 KKQKLFDILRSQNHFKPPAVVYVSSRVGADLLANAITVVTGVKALSIHGEKPMKERRDVM 401
Query: 394 NGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKLGNAILM 453
F G+ VLV+T V RG+D+ V +I +++P+ + ++H GR R G+ G AI+
Sbjct: 402 GSFLGGEVPVLVSTGVLGRGVDLLVVRQVIVFDMPSTIKEYIHVIGRASRMGEKGTAIVF 461
Query: 454 YTNSQR 459
R
Sbjct: 462 VNEDDR 467
>AT1G63250.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:23463284-23466451 REVERSE LENGTH=798
Length = 798
Score = 173 bits (439), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 124/449 (27%), Positives = 228/449 (50%), Gaps = 25/449 (5%)
Query: 109 LPPRLVESLHNRSITHLFPIQRAVLIPALEGRDIIARAKTGTGKTLAFGIPIIKHITEDE 168
+ P +++L I + +Q A L L+G+D + +AKTGTGK++AF +P I+ + +
Sbjct: 335 ISPLTLKALSASGILKMTRVQDATLSECLDGKDALVKAKTGTGKSMAFLLPAIETVLK-- 392
Query: 169 HAVSHRRSAGRLPRV--LVLAPTRELARQVEKEIKESAPYLSTVCV---YGGVSY-VTQQ 222
A++ + ++ + L+L PTRELA Q+ E K + + V GG + + QQ
Sbjct: 393 -AMNSGKGVNKVAPIFALILCPTRELASQIAAEGKALLKFHDGIGVQTLIGGTRFKLDQQ 451
Query: 223 SALTRGVDVVVGTPGRIIDLI---NGNSLKLSEVQYLVLDEADQMLAVGFEEDVETILET 279
+ +++ TPGR++D I +G + +L ++ ++DEAD +L +GF DVE I++
Sbjct: 452 RLESEPCQILIATPGRLLDHIENKSGLTSRLMALKLFIVDEADLLLDLGFRRDVEKIIDC 511
Query: 280 VPSQRQTMLFSATMPGWVKKLSRKYLNNPLT-IDLVGDEEEKLAEGIKLYALSATSTSKR 338
+P QRQ++LFSAT+P V+++S+ L + ID +G + + ++ + A S
Sbjct: 512 LPRQRQSLLFSATIPKEVRRVSQLVLKRDHSYIDTIGLGCVETHDKVRQSCIVAPHESHF 571
Query: 339 TILTDLITVYAKGG---KTIVFTQTKRDADEV-SLALTSSITSEALHGDISQHQRERTLN 394
++ L+ + K IVF T + +L + +H Q R R +
Sbjct: 572 HLVPHLLKEHINNTPDYKIIVFCSTGMVTSLMYTLLREMKLNVREIHARKPQLHRTRVSD 631
Query: 395 GFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKLGNAILMY 454
F++ +LV +DV+ARG++ P+V L+I +P+D E ++HR GRTGR GK G +L+
Sbjct: 632 EFKESNRLILVTSDVSARGMNYPDVTLVIQVGIPSDREQYIHRLGRTGREGKGGEGLLLI 691
Query: 455 TNSQRRTVRSLERDVGCKFEFVNPPAMEEVLAASADQVVATLNGVHPES-----IEFFTP 509
+R + L+ E + P ++ ++ DQ +A ++ E+ + ++
Sbjct: 692 APWERYFLDELK---DLPLEPIPAPDLDSIVKHQVDQSMAKIDTSIKEAAYHAWLGYYNS 748
Query: 510 TAQKLIEEQGTSXXXXXXXHLSGFSKPPS 538
+ ++ + H G KPP+
Sbjct: 749 VRETGRDKTTLAELANRFCHSIGLEKPPA 777
>AT1G12770.1 | Symbols: ISE1, EMB1586 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr1:4351888-4353543 FORWARD LENGTH=551
Length = 551
Score = 171 bits (432), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 125/436 (28%), Positives = 211/436 (48%), Gaps = 56/436 (12%)
Query: 96 SPTADELDVTKLGLPPRLVESLHNRSITHLFPIQRAVLIPALEGRDIIARAKTGTGKTLA 155
SP +LGLP L++SL + +Q A + ++G D + ++ TG+GKTLA
Sbjct: 104 SPLFSAKSFEELGLPDSLLDSLEREGFSVPTDVQSAAVPAIIKGHDAVIQSYTGSGKTLA 163
Query: 156 FGIPIIKHI--TEDEHAVSHRRSAGRLP-RVLVLAPTRELARQVEKEI-KESAPYLSTVC 211
+ +PI+ I ++ SH + R + +++AP+REL Q+ +E+ K P +
Sbjct: 164 YLLPILSEIGPLAEKSRSSHSENDKRTEIQAMIVAPSRELGMQIVREVEKLLGPVHRRMV 223
Query: 212 --VYGGVSYVTQQSALTRGV-DVVVGTPGRIIDLINGNSLKLSEVQYLVLDEADQMLAVG 268
+ GG + + Q+ AL + +VVGTPGRI ++ G L ++LVLDE D++L+
Sbjct: 224 QQLVGGANRMRQEEALKKNKPAIVVGTPGRIAEISKGGKLHTHGCRFLVLDEVDELLSFN 283
Query: 269 FEEDVETILETV--------------PSQRQTMLFSATMPGWVKKLSRKYLNNPLTIDL- 313
F ED+ ILE V + RQT+L SAT+P V + ++ + + P+ +
Sbjct: 284 FREDIHRILEHVGKRSGAGPKGEVDERANRQTILVSATVPFSVIRAAKSWSHEPVLVQAN 343
Query: 314 ---------------------------VGDEEEKLAEGIKLYALSATSTSKRTILTDLIT 346
+ + L +K Y S + + T
Sbjct: 344 KVTPLDTVQPSAPVMSLTPTTSEADGQIQTTIQSLPPALKHY--YCISKHQHKVDTLRRC 401
Query: 347 VYAKGGKTIV-FTQTKRDADEVSLALTS-SITSEALHGDISQHQRERTLNGFRQGKFTVL 404
V+A ++++ F R +V L + + S +HGD+ + R L F+ G+ VL
Sbjct: 402 VHALDAQSVIAFMNHSRQLKDVVYKLEARGMNSAEMHGDLGKLGRSTVLKKFKNGEIKVL 461
Query: 405 VATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKLGNAILMYTNSQRRTVRS 464
V +++ARGLD+ DL+++ ELP D + HR+GRTGR G+ G + + SQ V+
Sbjct: 462 VTNELSARGLDVAECDLVVNLELPTDAVHYAHRAGRTGRLGRKGTVVTVCEESQVFIVKK 521
Query: 465 LERDVGCKF---EFVN 477
+E+ +G F EFV+
Sbjct: 522 MEKQLGLPFLYCEFVD 537
>AT5G11170.2 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3554272-3556646 FORWARD LENGTH=344
Length = 344
Score = 170 bits (431), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 103/316 (32%), Positives = 162/316 (51%), Gaps = 16/316 (5%)
Query: 141 DIIARAKTGTGKTLAFGIPIIKHITEDEHAVSHRRSAGRLPRVLVLAPTRELARQVEKEI 200
D+I +AK+G GKT F + ++ I VS LVL TRELA Q+ E
Sbjct: 2 DVICQAKSGMGKTAVFVLSTLQQIEPSPGQVS----------ALVLCHTRELAYQICNEF 51
Query: 201 KESAPYLSTVCV---YGGVSYVTQQSALTRGV-DVVVGTPGRIIDLINGNSLKLSEVQYL 256
+ YL V YGGV+ + L +VVGTPGR++ L L L V++
Sbjct: 52 VRFSTYLPDTKVSVFYGGVNIKIHKDLLKNECPHIVVGTPGRVLALAREKDLSLKNVRHF 111
Query: 257 VLDEADQML-AVGFEEDVETILETVPSQRQTMLFSATMPGWVKKLSRKYLNNPLTIDLVG 315
+LDE D+ML ++ DV+ I + P +Q M+FSAT+ ++ + +K++ +P+ I V
Sbjct: 112 ILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEI-YVD 170
Query: 316 DEEEKLAEGIKLYALSATSTSKRTILTDLITVYAKGGKTIVFTQTKRDADEVSLALTSSI 375
DE + G+ + + + K L DL+ I R A+ L + +
Sbjct: 171 DEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNF 230
Query: 376 TSEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFV 435
S +H +SQ +R F++G +LVATD+ RG+DI V+++I+Y++P+ +T++
Sbjct: 231 PSICIHSGMSQEERLTRYKSFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYL 290
Query: 436 HRSGRTGRAGKLGNAI 451
HR GR GR G G AI
Sbjct: 291 HRVGRAGRFGTKGLAI 306
>AT2G07750.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr2:3576483-3580396 FORWARD LENGTH=845
Length = 845
Score = 169 bits (428), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 124/449 (27%), Positives = 228/449 (50%), Gaps = 25/449 (5%)
Query: 109 LPPRLVESLHNRSITHLFPIQRAVLIPALEGRDIIARAKTGTGKTLAFGIPIIKHITEDE 168
+ P +++L I + +Q A L L+G+D + +AKTGTGK++AF +P I+ + +
Sbjct: 382 ISPLTLKALSASGIVKMTRVQDATLSECLDGKDALVKAKTGTGKSMAFLLPAIETVLK-- 439
Query: 169 HAVSHRRSAGRLP--RVLVLAPTRELARQVEKEIK---ESAPYLSTVCVYGGVSY-VTQQ 222
A++ + ++ VL+L PTRELA Q+ E K ++ + + GG + + QQ
Sbjct: 440 -AMNSGKGVHKVAPIFVLILCPTRELASQIAAEGKALLKNHDGIGVQTLIGGTRFRLDQQ 498
Query: 223 SALTRGVDVVVGTPGRIIDLI---NGNSLKLSEVQYLVLDEADQMLAVGFEEDVETILET 279
+ +++ TPGR++D I +G + +L ++ ++DEAD +L +GF+ DVE I++
Sbjct: 499 RLESEPCQILIATPGRLLDHIENKSGLTSRLMALKLFIVDEADLLLDLGFKRDVEKIIDC 558
Query: 280 VPSQRQTMLFSATMPGWVKKLSRKYLNNPLT-IDLVGDEEEKLAEGIKLYALSATSTSKR 338
+P QRQ++LFSAT+P V+++S+ L + ID +G + + +K + A S
Sbjct: 559 LPRQRQSLLFSATIPKEVRRVSQLVLKRDHSYIDTIGLGCVETHDKVKQSCIVAPHESHF 618
Query: 339 TILTDLITVYAKGG---KTIVFTQTKRDADEV-SLALTSSITSEALHGDISQHQRERTLN 394
++ L+ + K IVF T + +L + +H Q R +
Sbjct: 619 HLVPHLLKEHINNMPDYKIIVFCSTGMVTSLMYTLLREMKLNVREIHARKPQLHRTCVSD 678
Query: 395 GFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKLGNAILMY 454
F++ +LV +DV+ARG++ P+V L+I +P+D E ++HR GRTGR GK G +L+
Sbjct: 679 EFKESNRLILVTSDVSARGMNYPDVTLVIQVGIPSDREQYIHRLGRTGREGKGGKGLLLI 738
Query: 455 TNSQRRTVRSLERDVGCKFEFVNPPAMEEVLAASADQVVATLNGVHPES-----IEFFTP 509
+R + L+ E + P ++ + DQ +A ++ E+ + ++
Sbjct: 739 APWERYFLDELK---DLPLEPIPAPDLDSRVKHQVDQSMAKIDTSIKEAAYHAWLGYYNS 795
Query: 510 TAQKLIEEQGTSXXXXXXXHLSGFSKPPS 538
+ ++ + H G KPP+
Sbjct: 796 VRETGRDKTTLAELANRFCHSIGLEKPPA 824
>AT3G16840.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:5738020-5743042
REVERSE LENGTH=826
Length = 826
Score = 165 bits (417), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 125/414 (30%), Positives = 203/414 (49%), Gaps = 70/414 (16%)
Query: 107 LGLPPRLVESLHNRSITHLFPIQRAVL-IPALEGRDIIARAKTGTGKTLAFGIPIIKHIT 165
+ L P L++S++ IQ+A + A +G+D+I A+TG+GKTLAFG+PI++ +
Sbjct: 195 MRLHPLLMKSIYRLDFKEPTKIQKACFNVAAYQGKDVIGAAETGSGKTLAFGLPILQRLL 254
Query: 166 EDEHAV----------SHRRSAGRLPRVLVLAPTRELARQVEKEIKESAPYLST--VCVY 213
++ V + + +A R L++ PTRELA QV + ++ +A LS V +
Sbjct: 255 DEREKVGKLYALKGEEAQKYAADGYLRALIITPTRELALQVTEHLENAAKNLSVKVVPIV 314
Query: 214 GGVSYVTQQSALTRGVDVVVGTPGRIIDLINGNSLKLSEVQ---YLVLDEADQMLAVGFE 270
GG+ Q+ L ++VV TPGR+ +L++ L E+ + VLDEAD+M+ G
Sbjct: 315 GGMFSEKQERRLKEKPEIVVATPGRLWELMSAGEKHLVELHSLSFFVLDEADRMVERGHF 374
Query: 271 EDVETILETVP------------------------SQRQTMLFSATMP---GWVKKLSRK 303
++++IL+ +P +RQT +FSAT+ + KKL R
Sbjct: 375 RELQSILDLLPVTDKPNEGKTQTVKSNDTVLNVPKKKRQTFVFSATIALSSDFRKKLKRG 434
Query: 304 YL-----------------------NNPLTIDLVGDEEEKLAEGIKLYALSATSTSKRTI 340
+N IDL LA I+ + K
Sbjct: 435 SSKSKQSSSGEVNSIEVLSERAGMRDNVAIIDLTTTS--ILAPKIEESFIKCEEKEKDAY 492
Query: 341 LTDLITVYAKGGKTIVFTQTKRDADEVS-LALTSSITSEALHGDISQHQRERTLNGFRQG 399
L +++V+ +G +TIVF + D +S L + L ++ Q R ++++ FR
Sbjct: 493 LYYILSVHGQG-RTIVFCTSVTDLRHISGLLKILGLDVCTLFSEMKQRARLKSIDRFRAS 551
Query: 400 KFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKLGNAILM 453
+ +L+ATD+ ARG+DI NV IIHY+LP+ E +VHR GRT RA G +I +
Sbjct: 552 ENGILIATDLVARGIDIKNVRTIIHYKLPHSAEVYVHRCGRTARAFADGCSIAL 605
>AT5G11200.3 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3567389-3570686 FORWARD LENGTH=468
Length = 468
Score = 164 bits (414), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 113/388 (29%), Positives = 176/388 (45%), Gaps = 55/388 (14%)
Query: 109 LPPRLVESLHNRSITHLFPIQRAVLIPALEGRDIIARAKTGTGKTLAFGIPIIKHITEDE 168
L P L+ ++ + H +Q + A+ G D+I +AK+G GKT F + ++ I
Sbjct: 53 LKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPSP 112
Query: 169 HAVSHRRSAGRLPRVLVLAPTRELARQVEKEIKESAPYLSTVCV---YGGVSYVTQQSAL 225
VS LVL TRELA Q+ E + YL V YGGV+ + L
Sbjct: 113 GQVS----------ALVLCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNIKIHKDLL 162
Query: 226 TRGV-DVVVGTPGRIIDLINGNSLKLSEVQYLVLDEADQML-AVGFEEDVETILETVPSQ 283
+VVGTPGR++ L L L V++ +LDE D+ML ++ DV+ I + P
Sbjct: 163 KNECPHIVVGTPGRVLALAREKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHD 222
Query: 284 RQTMLFSATMPGWVKKLSRKY------------------------------------LNN 307
+Q M+FSAT+ ++ + +K+ LN
Sbjct: 223 KQVMMFSATLSKEIRPVCKKFMQDGLRTLSGDSVALWWVGFGSGYCVFPRFHRARMGLNV 282
Query: 308 PLTID----LVGDEEEKLAEGIKLYALSATSTSKRTILTDLITVYAKGGKTIVFTQTKRD 363
P ID V DE + G+ + + + K L DL+ I R
Sbjct: 283 PSNIDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVSRA 342
Query: 364 ADEVSLALTSSITSEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLII 423
A+ L + + S +H +SQ +R F++G +LVATD+ RG+DI V+++I
Sbjct: 343 AELNKLLVECNFPSICIHSGMSQEERLTRYKSFKEGHKRILVATDLVGRGIDIERVNIVI 402
Query: 424 HYELPNDPETFVHRSGRTGRAGKLGNAI 451
+Y++P+ +T++HR GR GR G G AI
Sbjct: 403 NYDMPDSADTYLHRVGRAGRFGTKGLAI 430
>AT4G09730.1 | Symbols: RH39 | RH39 | chr4:6136333-6139510 FORWARD
LENGTH=621
Length = 621
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 121/364 (33%), Positives = 190/364 (52%), Gaps = 23/364 (6%)
Query: 103 DVTKLGLPPRLVESLHNRSITHLFPIQRAVLIPA-LEGRDIIARAKTGTGKTLAFGIPII 161
+ +LGL ++ +L +I IQ + IPA +E + ++ + TG+GKTLA+ +PI+
Sbjct: 113 NFQELGLSEEVMGALQELNIEVPTEIQ-CIGIPAVMERKSVVLGSHTGSGKTLAYLLPIV 171
Query: 162 KHITEDEHAVSHRRSAGRLPRVLVLAPTRELARQV---EKEIKESAPYLSTVCVYGGVSY 218
+ + EDE + +++ R PR +VL PTREL+ QV K I A + S + V GG
Sbjct: 172 QLMREDEANLG-KKTKPRRPRTVVLCPTRELSEQVYRVAKSISHHARFRS-ILVSGGSRI 229
Query: 219 VTQQSALTRGVDVVVGTPGRIIDLINGNSLKLSEVQYLVLDEADQMLAVGFEEDVETILE 278
Q+ +L +D+VVGTPGRI+ I ++ ++ YLVLDEAD M GF ++ L
Sbjct: 230 RPQEDSLNNAIDMVVGTPGRILQHIEEGNMVYGDIAYLVLDEADTMFDRGFGPEIRKFLA 289
Query: 279 TVPSQR---------QTMLFSATMPGWVKKLSRKYLNNPLTIDLVGDEEEKLAEGIKLY- 328
+ +QR QT+L +ATM V+KL + + +K+A +
Sbjct: 290 PL-NQRALKTNDQGFQTVLVTATMTMAVQKLVDEEFQGIEHLR-TSTLHKKIANARHDFI 347
Query: 329 ALSATSTSKRTILTDLITVYAKGGKTIVFTQTKRDADEVSLALT-SSITSEALHGDISQH 387
LS +L L AKG K +VF T + V L+ + I++ HG++
Sbjct: 348 KLSGGEDKLEALLQVLEPSLAKGSKVMVFCNTLNSSRAVDHYLSENQISTVNYHGEVPAE 407
Query: 388 QRERTLNGFR--QGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAG 445
QR L F+ +G LV TD+AARGLD+ +VD ++ ++ P + ++HR+GRT R G
Sbjct: 408 QRVENLKKFKDEEGDCPTLVCTDLAARGLDL-DVDHVVMFDFPKNSIDYLHRTGRTARMG 466
Query: 446 KLGN 449
G
Sbjct: 467 AKGK 470
>AT4G15850.1 | Symbols: ATRH1, RH1 | RNA helicase 1 |
chr4:9001426-9004534 FORWARD LENGTH=522
Length = 522
Score = 157 bits (396), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 130/451 (28%), Positives = 210/451 (46%), Gaps = 84/451 (18%)
Query: 109 LPPRLVESLHNRSITHLFPIQRAV----LIPALEGRDIIARAKTGTGKTLAFGIPIIKHI 164
L P+L ++L N I+ LFP+Q AV + P RDI + TG+GKTL++ +PI++ +
Sbjct: 38 LNPKLKKALENMGISSLFPVQVAVWHETIGPGGFERDICVNSPTGSGKTLSYALPIVQLL 97
Query: 165 TEDEHAVSHRRSAGRLPRVLVLAPTRELARQVEKEIKESAPYL-----STV---CVYGGV 216
R R LV+ PTR+LA QV+ AP + S V + G +
Sbjct: 98 AS---------RPVRCLRALVVLPTRDLALQVKDVFDAIAPAVGLSVGSAVGQSSIAGEI 148
Query: 217 SYVTQQSALTRG---------------VDVVVGTPGRIIDLINGNS-LKLSEVQYLVLDE 260
S + + L G VD++V TPGR++D IN L ++YLV+DE
Sbjct: 149 SQLIKTPKLDAGICYDPDDLSQNLESAVDILVATPGRLMDHINNTKGFTLEHLRYLVVDE 208
Query: 261 ADQMLAVGFEEDVETILET---------------VPS--------QRQT----------- 286
D++L ++ + T+L+ VPS +RQ+
Sbjct: 209 TDRLLREAYQSWLPTVLQLTQTSDDSLFPSFTPFVPSAFGSLQTVRRQSVERGFKGKPYP 268
Query: 287 ----MLFSATMPGWVKKLSRKYLNNPLTIDLVGDEEEKLAEGIKLYALSATSTSKRTILT 342
M+ SAT+ KL + L++PL + G +L E ++ L + K L
Sbjct: 269 RLVKMVLSATLTQDPSKLIQLDLHHPLFMT-TGGSRYRLPEKLECLRLICETGMKPVYLV 327
Query: 343 DLITVYAKGGKTIVFTQ----TKRDADEVSLALTSSITSEALHGDISQHQRERTLNGFRQ 398
L+ + +G K I+FT T+R ++ I ++ G ++Q R + L FR+
Sbjct: 328 ALLKSW-EGEKCIIFTSSVETTRRLCKLLNFFGDPKIKAKEYSGGLNQSLRSKELKAFRK 386
Query: 399 GKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKLGNAILMYTNSQ 458
G VLVA+D RG+D+ V +I+Y++P +TF+HR+GRT RAG+ G + +N +
Sbjct: 387 GDIQVLVASDALTRGMDVKGVTNVINYDMPPFAKTFIHRAGRTARAGQAGRCFTLLSNHE 446
Query: 459 RRTVRSLERDVG---CKFEFVNPPAMEEVLA 486
R L VG C + P +++ + A
Sbjct: 447 VRRFSKLLEKVGSDSCPIYPIPPTSLDSIRA 477
>AT3G02065.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:359628-360734
FORWARD LENGTH=368
Length = 368
Score = 156 bits (395), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 104/332 (31%), Positives = 176/332 (53%), Gaps = 16/332 (4%)
Query: 136 ALEGRDIIARAKTGTGKTLAFGIPIIKHIT--EDEHAVSHRRSAGRLPRVLVLAPTRELA 193
AL G+ ++A A TG+GKT +F +PII T EH RR+ P +VLAPTREL
Sbjct: 7 ALTGKSLLASADTGSGKTASFLVPIISRCTTYHSEHPSDQRRN----PLAMVLAPTRELC 62
Query: 194 RQVEKEIK---ESAPYLSTVCVYGGVSYVTQQSALTRGVDVVVGTPGRIIDLINGNSLKL 250
QVE + K + P+ T V GG Q + +GV++++GTPGR++DL++ ++++L
Sbjct: 63 VQVEDQAKMLGKGLPF-KTALVVGGDPMSGQLYRIQQGVELIIGTPGRVVDLLSKHTIEL 121
Query: 251 SEVQYLVLDEADQMLAVGFEEDVETILETVPSQRQTMLFSATMPGWVKKLSRKYLNNPLT 310
+ VLDE D ML GF + V I + + SQ Q +LFSAT+ V+K+ +
Sbjct: 122 DNIMTFVLDEVDCMLQRGFRDQVMQIFQAL-SQPQVLLFSATISREVEKVGGSLAKEIIL 180
Query: 311 IDLVGDEEEKLAEGIKLYALSATSTSKRTILTDLITVYAK-GGKTIVFTQTKRDADEVSL 369
+ + K + + A+ + K+ L D++ +V+ ++ AD ++
Sbjct: 181 VSI--GNPNKPNKAVNQLAIWVDAKQKKQKLFDILRSQNHFKPPAVVYVSSRVGADLLAN 238
Query: 370 ALT--SSITSEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYEL 427
A+T + + + ++HG+ +R + F G+ VLV+T V RG+D+ V +I +++
Sbjct: 239 AITVVTGVKALSIHGEKPMKERRDVMGSFLGGEVPVLVSTGVLGRGVDLLVVRQVIVFDM 298
Query: 428 PNDPETFVHRSGRTGRAGKLGNAILMYTNSQR 459
P+ + ++H GR R G+ G AI+ R
Sbjct: 299 PSTIKEYIHVIGRASRMGEKGTAIVFVNEDDR 330
>AT3G09720.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:2980483-2983268
REVERSE LENGTH=541
Length = 541
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 102/337 (30%), Positives = 181/337 (53%), Gaps = 25/337 (7%)
Query: 127 PIQRAVLIPALEGRDIIARAKTGTGKTLAFGIPIIKHITEDEHAVSHRRSAGRLPRVLVL 186
PIQR + L GR+ A A TG+GKT AF P++ + +R + R ++L
Sbjct: 166 PIQRQAIPILLSGRECFACAPTGSGKTFAFICPML---------IKLKRPSTDGIRAVIL 216
Query: 187 APTRELARQVEKE----IKESAPYLSTVCVYGGVSYVTQQSALTR-GVDVVVGTPGRIID 241
+P RELA Q +E IK S ++ + + + + ++ DV++ TP R+
Sbjct: 217 SPARELAAQTAREGKKLIKGSNFHIRLM-----TKPLVKTADFSKLWCDVLISTPMRLKR 271
Query: 242 LINGNSLKLSEVQYLVLDEADQMLAVGFEEDVETILETV--PSQRQTMLFSATMPGWVKK 299
I + LS+V+YLVLDE+D++ + ++ +++ PS ++ LFSAT+P V++
Sbjct: 272 AIKAKKIDLSKVEYLVLDESDKLFEQSLLKQIDCVVKACSNPSIIRS-LFSATLPDSVEE 330
Query: 300 LSRKYLNNPLTIDLVGDEEEKLAEGIKLYALSATSTSKRTILTDLITVYAKGGKTIVFTQ 359
L+R +++ + + ++G + +E +K + A S + + + ++F Q
Sbjct: 331 LARSIMHDAVRV-IIG-RKNTASETVKQKLVFAGSEEGKLLALRQSFAESLNPPVLIFVQ 388
Query: 360 TKRDADEVSLAL-TSSITSEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPN 418
+K A E+ L +I + +H D+ +RE ++ FR G+ VL+ATDV ARG+D
Sbjct: 389 SKERAKELYDELKCENIRAGVIHSDLPPGERENAVDQFRAGEKWVLIATDVIARGMDFKG 448
Query: 419 VDLIIHYELPNDPETFVHRSGRTGRAGKLGNAILMYT 455
++ +I+Y+ P+ ++HR GR+GRAG+ G AI YT
Sbjct: 449 INCVINYDFPDSASAYIHRIGRSGRAGRSGEAITFYT 485
>AT2G40700.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:16976783-16979392
FORWARD LENGTH=609
Length = 609
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 122/429 (28%), Positives = 198/429 (46%), Gaps = 88/429 (20%)
Query: 105 TKLGLPPRLVESLHNRSITHLFPIQRAVLIPA-LEGRDIIARAKTGTGKTLAFGIPIIKH 163
+ LGL +L + L R + +A IP L GRD++ A TGTGKT+A+ P+I H
Sbjct: 32 SSLGLDTKLSDQLKERMGFEAPTLVQAQAIPVILSGRDVLVNAPTGTGKTIAYLAPLIHH 91
Query: 164 ITEDEHAVSHRRSAGRLPRVLVLAPTRELARQVEKEIKESAPYLSTVC---VYGGVSYVT 220
+ H+ RS G LV+ PTREL QV + +++ + V GG
Sbjct: 92 L--QGHSPKVDRSHGTF--ALVIVPTRELCLQVYETLEKLLHRFHWIVPGYVMGGEKKAK 147
Query: 221 QQSALTRGVDVVVGTPGRIID-LINGNSLKLSEVQYLVLDEADQMLAVGFEEDVETILET 279
+++ L +G+ +++ TPGR++D L N S +++++ DEAD +L +G+ +++E I++
Sbjct: 148 EKARLRKGISILIATPGRLLDHLKNTASFVHKNLRWVIFDEADSILELGYGKEIEQIIKL 207
Query: 280 VPS----------------QRQTMLFSATMPGWVKKLSRKYLNNPLTIDLVGDEEEKLAE 323
+ S Q+Q +L SAT+ V L++ L++P+ ++G + KL +
Sbjct: 208 LGSGQNEQGEEDDIVPKGIQKQNLLLSATLNDKVNDLAKLSLDDPV---MIGLDNTKLQQ 264
Query: 324 GIKLYALSATSTSKRTIL-----------------TDLITVYAK---------------- 350
+ + + +A + ++ + L+ Y +
Sbjct: 265 NLSIESPAAPDSDAEDMVIHVNKSANPLSEDYGIPSQLVQRYLRVPCGARLVALLSVLKN 324
Query: 351 ------GGKTIVFTQTKRDADEVSLALTS-------SITSEA-------------LHGDI 384
K +VF T RDA + +L S S T E LHG +
Sbjct: 325 LFEREASQKVVVFFST-RDAVDFHYSLLSEFQWPPNSETEEEGTKELFLKCKTFRLHGSM 383
Query: 385 SQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRA 444
Q R F+ K VL++TDVAARGLD P V II Y+ P + +VHR GRT R
Sbjct: 384 EQEDRRSAFGTFKTEKQAVLLSTDVAARGLDFPKVRCIIQYDCPGEATEYVHRVGRTARI 443
Query: 445 GKLGNAILM 453
G+ G A+L
Sbjct: 444 GEKGEALLF 452
>AT5G11200.2 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3567389-3570686 FORWARD LENGTH=486
Length = 486
Score = 150 bits (379), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 113/406 (27%), Positives = 177/406 (43%), Gaps = 73/406 (17%)
Query: 109 LPPRLVESLHNRSITHLFPIQRAVLIPALEGRDIIARAKTGTGKTLAFGIPIIKHITEDE 168
L P L+ ++ + H +Q + A+ G D+I +AK+G GKT F + ++ I
Sbjct: 53 LKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPSP 112
Query: 169 HAVSHRRSAGRLPRVLVLAPTRELARQVEKEIKESAPYLSTVCV---YGGVSYVTQQSAL 225
VS LVL TRELA Q+ E + YL V YGGV+ + L
Sbjct: 113 GQVS----------ALVLCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNIKIHKDLL 162
Query: 226 TRGV-DVVVGTPGRIIDLINGNSLKLSEVQYLVLDEADQML-AVGFEEDVETILETVPSQ 283
+VVGTPGR++ L L L V++ +LDE D+ML ++ DV+ I + P
Sbjct: 163 KNECPHIVVGTPGRVLALAREKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHD 222
Query: 284 RQTMLFSATMPGWV----KKLSRKYL-NNPLTIDLVG----------------------- 315
+Q M+FSAT+ + KK + +L N +++ L
Sbjct: 223 KQVMMFSATLSKEIRPVCKKFMQDFLENETVSVRLFSFGVENSEWRLCSFGFIVLVWVSM 282
Query: 316 -----------------------------DEEEKLA-EGIKLYALSATSTSKRTILTDLI 345
D+E KL G+ + + + K L DL+
Sbjct: 283 FRAILMFHSKTHIFEEKRWTRISPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLL 342
Query: 346 TVYAKGGKTIVFTQTKRDADEVSLALTSSITSEALHGDISQHQRERTLNGFRQGKFTVLV 405
I R A+ L + + S +H +SQ +R F++G +LV
Sbjct: 343 DALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKSFKEGHKRILV 402
Query: 406 ATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKLGNAI 451
ATD+ RG+DI V+++I+Y++P+ +T++HR GR GR G G AI
Sbjct: 403 ATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAI 448
>AT5G54910.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr5:22298668-22301719 REVERSE LENGTH=739
Length = 739
Score = 149 bits (376), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 117/376 (31%), Positives = 192/376 (51%), Gaps = 38/376 (10%)
Query: 128 IQRAVLIPALEGRDIIARAKTGTGKTLAFGIPIIKHITEDEHAVSHRRSAGRLPRVLVLA 187
+Q A + AL GRDI+ A+TG+GKTLAF IPI++ + + R S ++++
Sbjct: 97 VQSAAIPHALCGRDILGAARTGSGKTLAFVIPILEKLHRE------RWSPEDGVGCIIIS 150
Query: 188 PTRELARQVEKEIKESAPY--LSTVCVYGGVSYVTQQSALTRGVDVVVGTPGRIIDLING 245
PTRELA Q + + + S + GG V + ++++V PGR++ ++
Sbjct: 151 PTRELAAQTFGVLNKVGKFHKFSAGLLIGGREGVDVEKERVHEMNILVCAPGRLLQHMDE 210
Query: 246 N-SLKLSEVQYLVLDEADQMLAVGFEEDVETILETVPSQRQTMLFSATMPGWVKKLSRKY 304
+ + ++Q L+LDEAD++L F+ ++ I+ +P RQT+LFSAT VK L+R
Sbjct: 211 TPNFECPQLQILILDEADRVLDSAFKGQLDPIISQLPKHRQTLLFSATQTKKVKDLARLS 270
Query: 305 LNNPLTIDLVGDEEEKLAEGIKLYALSATSTS-KRTILT-------DLITVYAK---GGK 353
L +P I + + A++AT TS +T++ D++ + K +
Sbjct: 271 LRDPEYISVHAE------------AVTATPTSLMQTVMIVPVEKKLDMLWSFIKTHLNSR 318
Query: 354 TIVFTQTKRDADEVSLA---LTSSITSEALHGDISQHQRERTLNGFRQGKFTVLVATDVA 410
+VF TK+ V A L I ++LHG +SQ +R + F + + +VL TDV
Sbjct: 319 ILVFLSTKKQVKFVHEAFNKLRPGIPLKSLHGKMSQEKRMGVYSQFIERQ-SVLFCTDVL 377
Query: 411 ARGLDIPN-VDLIIHYELPNDPETFVHRSGRTGRAGKLGNAILMYTNSQRRTVRSL-ERD 468
ARGLD VD ++ + P D +++HR GRT R G ++L T S+ + + L E
Sbjct: 378 ARGLDFDKAVDWVVQVDCPEDVASYIHRVGRTARFYTQGKSLLFLTPSEEKMIEKLQEAK 437
Query: 469 VGCKFEFVNPPAMEEV 484
V K N ++EV
Sbjct: 438 VPIKLIKANNQKLQEV 453
>AT4G34910.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr4:16631661-16634834
FORWARD LENGTH=626
Length = 626
Score = 148 bits (374), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 111/385 (28%), Positives = 188/385 (48%), Gaps = 50/385 (12%)
Query: 106 KLGLPPRLVESLHNRSITHLFPIQRAVLIPALEGRDIIARAKTGTGKTLAFGIPIIKHIT 165
+LGL RL+ +L + I IQ++ + LEG+D++ARAKTG+GKTLA+ +P+++ +
Sbjct: 50 ELGLDSRLIRALTKKGIEKPTLIQQSAIPYILEGKDVVARAKTGSGKTLAYLLPLLQKLF 109
Query: 166 EDEHAVSHRRSAGRLPRVLVLAPTRELARQVEKE----IKESAPYLSTVCVYGGVSYVTQ 221
+ +VS ++ A P +L P+REL +QV E I+ L V + +S
Sbjct: 110 SAD-SVSKKKLA---PSAFILVPSRELCQQVYTEVSSLIELCRVQLKAVQLTSSMSASDM 165
Query: 222 QSALTRGVDVVVGTPGRIIDLINGNSLKLSEVQ----YLVLDEADQMLAVGFEEDVETIL 277
++AL +++V TP I L+ + V LVLDEAD +L+ G+E+++ ++
Sbjct: 166 RNALAGLPEILVSTPACIPKCFAAGVLEPTAVSESLSILVLDEADLLLSYGYEDNLRSVT 225
Query: 278 ETVPSQRQTMLFSATMPGWVKKLSRKYLNNPLTIDLV--GDEEEKLAEGIKLYALSATST 335
+P + Q +L SAT V+KL + L+NP+ + L D+EE + ++ + +S ++
Sbjct: 226 SIIPRRCQCLLMSATTSSDVEKLKKLILHNPIVLTLTEDNDKEEAVPSNVQQFWISCSAQ 285
Query: 336 SKRTILTDLITVYAKGGKTIVFTQTKRDADEVSLALTS-SITSEALHGDISQHQRERTLN 394
K + L+ + K ++F T + L L I S L+G++ Q+ R L
Sbjct: 286 DKLLHILALLKLEVVQKKILIFINTIDMGFRLKLFLEKFGIKSAILNGELPQNSRLHILE 345
Query: 395 GFRQGKFTVLVATDV-----------------------------------AARGLDIPNV 419
F G F L+ATD RG+D V
Sbjct: 346 QFNAGLFDYLIATDDNSQTKKQKEEAKGEANKENKKNNKRSKPKLDAEFGVVRGIDFKKV 405
Query: 420 DLIIHYELPNDPETFVHRSGRTGRA 444
+I++++P ++HR GRTGRA
Sbjct: 406 HTVINFDMPQSVTGYIHRIGRTGRA 430
>AT3G06980.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:2201531-2204662 FORWARD LENGTH=781
Length = 781
Score = 137 bits (344), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 116/431 (26%), Positives = 194/431 (45%), Gaps = 46/431 (10%)
Query: 81 QNNNDDDSGNGFLSDSPTADELDVTKLGLPPRLVESLHNRSITHLFPIQRAVLIPALEGR 140
+N D GF S A+ +G ++++L ++ IQ P ++G+
Sbjct: 359 RNKTKDTRETGFFSRKTFAE------IGCSEDMMKALKEQNFDRPAHIQAMAFSPVIDGK 412
Query: 141 DIIARAKTGTGKTLAFGIPIIKHITEDEHAVSHRRSAGRLPRVLVLAPTRELARQV---E 197
I ++G+GKTLA+ +P+I+ + E+E H +S+ PRV+VL PT ELA QV
Sbjct: 413 SCIIADQSGSGKTLAYLVPVIQRLREEE-LQGHSKSSPGCPRVIVLVPTAELASQVLANC 471
Query: 198 KEIKESAPYLSTVCVYGGVSYVTQQSALTRGVDVVVGTPGRIIDLINGNSLKLSEVQYLV 257
+ I +S ++ V GG TQ L +GVDV++ TPGR L+N L LS ++ +
Sbjct: 472 RSISKSGVPFRSMVVTGGFRQRTQLENLEQGVDVLIATPGRFTYLMNEGILGLSNLRCAI 531
Query: 258 LDEADQMLAVG-FEEDVETILETVPSQRQTMLFSATMPGWV-KKLSRKYLNNPLTIDLVG 315
LDE D + FE ++ ++ + P Q + +AT+P + KL + P ++G
Sbjct: 532 LDEVDILFGDDEFEAALQNLINSSPVTAQYLFVTATLPLEIYNKLVEVF---PDCEVVMG 588
Query: 316 DEEEKLAEGIKLYALSAT---------STSKRTILTDLITVYAKG--GKTIVFTQTKRDA 364
+++ ++ + + + T+ + T L+ + + KTI+F
Sbjct: 589 PRVHRVSNALEEFLVDCSGDDNAEKTPETAFQNKKTALLQIMEENPVSKTIIFCNKIETC 648
Query: 365 DEVSLALTSSITSEA------LHGDISQHQRERTLNGFRQGK----FTVLVATDVAARGL 414
+V E H +SQ R + F + LV TD A+RG+
Sbjct: 649 RKVENIFKRVDRKERQLHVLPFHAALSQESRLTNMQEFTSSQPEENSLFLVCTDRASRGI 708
Query: 415 DIPNVDLIIHYELPNDPETFVHRSGRTGRAGK-LGNAILMYTNSQ----RRTVRSLER-- 467
D VD ++ ++ P DP +V R GRT R + G A + Q RR + E+
Sbjct: 709 DFSGVDHVVLFDFPRDPSEYVRRVGRTARGARGKGKAFIFVVGKQVGLARRIIERNEKGH 768
Query: 468 ---DVGCKFEF 475
DV +EF
Sbjct: 769 PVHDVPNAYEF 779
>AT3G53110.1 | Symbols: LOS4 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr3:19687968-19690423 FORWARD LENGTH=496
Length = 496
Score = 135 bits (340), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 110/376 (29%), Positives = 176/376 (46%), Gaps = 36/376 (9%)
Query: 95 DSPTADELDVTKLGLPPRLVESLHNRSITHLFPIQRAVLIPALEG---RDIIARAKTGTG 151
D+P L L P L++ L+ +A+ +P + + +IA+A G+G
Sbjct: 84 DTPYTSASRFEDLNLSPELMKGLYVEMKFEKPSKIQAISLPMIMTPPHKHLIAQAHNGSG 143
Query: 152 KTLAFGIPIIKHITEDEHAVSHRRSAGRLPRVLVLAPTRELARQVEKEIKESAPYLSTVC 211
KT F + ++ + R P+ L + PTRELA Q + +++ +
Sbjct: 144 KTTCFVLGMLSRVD----------PTLREPQALCICPTRELANQNMEVLQKMGKFTGITA 193
Query: 212 VYGGVSYVTQQSALTRGV----DVVVGTPGRIIDLINGNSLKLSEVQYLVLDEADQMLAV 267
A TRG VV+GTPG + + L L+ ++ LV DEAD MLA
Sbjct: 194 ELAVPDSTRGAPAATRGAPVSAHVVIGTPGTLKKWMAFKRLGLNHLKILVFDEADHMLAT 253
Query: 268 -GFEEDVETILET---VPSQRQTMLFSATMPGWVKKLSRKYLNNPLTIDLVGDEEEKLAE 323
GF +D I++ V Q +LFSAT VK + + +P L E+ +
Sbjct: 254 DGFRDDSLKIMKDIGRVNPNFQVLLFSATFNETVKDFVARTVKDP--NQLFVKREDLALD 311
Query: 324 GIKLY-ALSATSTSKRTILTDLITVYAKGGKTIVFTQTKRDADEVSLALTS---SITSEA 379
+K Y + +K ++ D I G+TI+F +TK A +V AL +TS
Sbjct: 312 SVKQYKVVCPKEQNKIEVIKDQIMELGDIGQTIIFVKTKASAQKVHKALAEMGYDVTS-- 369
Query: 380 LHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPN-------DPE 432
+HG++++ R++ + F++ VL+ATDV ARG D V+L+++Y LP D E
Sbjct: 370 VHGNLTESDRDKIVKEFKECLTQVLIATDVIARGFDQQRVNLVVNYNLPTKYETGEPDYE 429
Query: 433 TFVHRSGRTGRAGKLG 448
++HR GR GR G+ G
Sbjct: 430 VYLHRVGRAGRFGRKG 445
>AT1G71280.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:26870262-26872152 REVERSE LENGTH=465
Length = 465
Score = 121 bits (304), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 100/324 (30%), Positives = 157/324 (48%), Gaps = 51/324 (15%)
Query: 113 LVESLHNRSITHLFPIQRAVLIPAL-EGRDIIARAKTGTGKTLAFGIPIIKHITEDEHAV 171
++E+L P+Q A IP L +D++ A TG+GKTLAF +P I+ I
Sbjct: 28 IIEALDRSGFEVCTPVQ-AETIPFLCSHKDVVVDAATGSGKTLAFLLPFIEII------- 79
Query: 172 SHRRSAGRLPRV-----LVLAPTRELARQVEKEIKESAPYLSTVC--VYGGVSYVTQQSA 224
RRS P+ ++++PTREL+ Q+ K + + C V ++ + ++
Sbjct: 80 --RRSNSYPPKPHQVMGVIISPTRELSAQIHK-VARAVRLDFAKCREVEADMNTLEEE-- 134
Query: 225 LTRGVDVVVGTPGRIIDLINGNS-LKLSEVQYLVLDEADQMLAVGFEEDVETILETVPSQ 283
G ++++GTPGR+ D++ L ++ L+LDEAD++L +GF++ V I+ +P Q
Sbjct: 135 ---GANLLIGTPGRLSDMMKRMEFLDFRNLEILILDEADRLLDMGFQKQVNYIISRLPKQ 191
Query: 284 RQTMLFSATMPGWVKKLSRKYLNNPLTIDLVGDEEEKLAEGIKLYALSATSTSKRTILTD 343
R+T LFSAT V L++ L NP L + K + L
Sbjct: 192 RRTGLFSATQTQAVADLAKAGLRNPY--------------------LKCEADQKSSQLVH 231
Query: 344 LITVYAKGGKTIVFTQTKRDADEVSLALT-----SSITSEALHGDISQHQRERTLNGFRQ 398
L+ + K K +VF T D L ++ SI+ HG + Q R+ L F +
Sbjct: 232 LL-IENKNKKLVVFFMTCACVDYWGLVISKIPSLKSISFFPTHGKMDQKGRDTALASFTE 290
Query: 399 GKFTVLVATDVAARGLDIPNVDLI 422
VL+ TDVAARGLDIP + I
Sbjct: 291 ASSGVLLCTDVAARGLDIPGIVYI 314
>AT5G19210.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:6461444-6463687
FORWARD LENGTH=472
Length = 472
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 94/365 (25%), Positives = 160/365 (43%), Gaps = 67/365 (18%)
Query: 122 ITHLFP--IQRAVLIPALEGRDIIARAKTGTGKTLAFGIPIIKHITEDEHAVSHRRSAGR 179
I +FP IQR L GRD I A+TG+GKTL + + I I +V
Sbjct: 94 IGFVFPTDIQREALPTLFTGRDCILHAQTGSGKTLTYLLLIFSLINPQRSSV-------- 145
Query: 180 LPRVLVLAPTRELARQVEKEIKESAPY-------LSTVCVYGGVSYVTQQSAL-TRGVDV 231
+ +++ PTREL QV K + A + + + G + +S L +
Sbjct: 146 --QAVIVVPTRELGMQVTKVARMLAAKSEIDVKGCTVMALLDGGTLRRHKSWLKAEPPAI 203
Query: 232 VVGTPGRIIDLINGNSLKLSEVQYLVLDEADQML----AVGFEEDVETILETVPS--QRQ 285
+V T + ++ + ++ V+ LV+DE D + VG V +L + S +RQ
Sbjct: 204 LVATVASLCHMLEKHIFRIDSVRVLVVDEVDFLFYSSKQVG---SVRKLLTSFSSCDKRQ 260
Query: 286 TMLFSATMP------------GWVKK-LSRKYLNNPLTIDLVGDEEEKLAEGIKLYALSA 332
T+ SA++P W K+ + +++ + + L + E
Sbjct: 261 TVFASASIPQHKHFVHDCIQQKWTKRDVVHVHVSAIMPMPLCLLHRFVMCE--------- 311
Query: 333 TSTSKRTILTDLITVYAKGGKTIVFT-----QTKRDADEVSLAL---------TSSITSE 378
T+K +L L+ A I+F ++K+ ++ S L S+
Sbjct: 312 -KTNKHQVLLALLESDAPES-AIIFVGEQSEKSKKAGNDPSTTLLMEFLKTSYKGSLEIL 369
Query: 379 ALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRS 438
L GD++ + R +L RQG +LV+TD+AARG+D+P I +++LP ++HR+
Sbjct: 370 LLEGDMNFNSRAASLTEIRQGGGFLLVSTDIAARGIDLPETTHIFNFDLPQTVTDYLHRA 429
Query: 439 GRTGR 443
GR GR
Sbjct: 430 GRAGR 434
>AT1G59990.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:22090369-22092885 REVERSE LENGTH=581
Length = 581
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 60/118 (50%), Gaps = 2/118 (1%)
Query: 353 KTIVFTQTKRDADEVSLAL-TSSITSEALHGDISQHQRERTLNGFRQGKFTVLVATDVAA 411
+T+VF T + V+ L +SI H + +R L FR+ V V TD AA
Sbjct: 426 RTMVFANTVEAVEAVADILEKASIQCYRYHKNHKLDERANILADFRETG-GVFVCTDAAA 484
Query: 412 RGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKLGNAILMYTNSQRRTVRSLERDV 469
RG+D+PNV +I + + F+HR GRT RAG+ G +YT + R V ++ V
Sbjct: 485 RGVDVPNVSHVIQADFASSAVDFLHRIGRTARAGQYGTVTSLYTEANRDLVEAIREAV 542
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 88/199 (44%), Gaps = 30/199 (15%)
Query: 128 IQRAVLIPA-LEGRDIIARAKTGTGKTLAFGIPIIKHITE---DEHAVSHRRSAGRLPRV 183
+ +AV IP+ L G+D+I A+TG+GKT + PII +T D + L +
Sbjct: 105 LTQAVCIPSILSGKDVIVAAETGSGKTHGYLAPIIDQLTNTALDSEVTNREERPFPLKNI 164
Query: 184 -LVLAPTRELARQVEKEI-----KESAPYLSTVCVYGGVSYVTQQSALTRGVDVVVGTPG 237
L+L P L QV + + ++ P L V G Q R D++V TP
Sbjct: 165 SLILCPNVMLCEQVVRMVNGLVDEDGNPLLRVEAVCGS------QGWPDRLPDIIVSTPA 218
Query: 238 RIIDLI----NGNSLKLSEVQYLVLDEADQMLAVGFEEDVETILETVPSQRQTMLFSATM 293
+++ I N L V+Y+V DEAD +L F+ + ++ + +
Sbjct: 219 ALLNNIEPKRNRRLEFLRCVKYVVFDEADMLLCGSFQNQIIRLINMLRFDEKQ------- 271
Query: 294 PGWVKKLSRKYLNNPLTID 312
V +L++ L P+ ID
Sbjct: 272 ---VSRLAKSNLGRPMEID 287
>AT1G27880.1 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr1:9708940-9713901 FORWARD LENGTH=911
Length = 911
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 57/124 (45%), Gaps = 1/124 (0%)
Query: 348 YAKGGKTIVFTQTKRDADEVSLALT-SSITSEALHGDISQHQRERTLNGFRQGKFTVLVA 406
Y + IV+ + + + D +S L ++I ++ H + R R F K V+VA
Sbjct: 483 YKEIRSIIVYCKFQYETDMISKYLRDNNINAKGYHSGLPAKDRVRIQESFCSNKIRVVVA 542
Query: 407 TDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKLGNAILMYTNSQRRTVRSLE 466
T GLD +V +IH+ +P E +V GR GR G+L L Y N +RSL
Sbjct: 543 TVAFGMGLDKGDVGAVIHFSVPGSMEEYVQEIGRAGRDGRLSYCHLFYDNDTYLKLRSLA 602
Query: 467 RDVG 470
G
Sbjct: 603 HSDG 606
>AT5G19210.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:6462100-6463687
FORWARD LENGTH=315
Length = 315
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 111/246 (45%), Gaps = 47/246 (19%)
Query: 231 VVVGTPGRIIDLINGNSLKLSEVQYLVLDEADQML----AVGFEEDVETILETVPS--QR 284
++V T + ++ + ++ V+ LV+DE D + VG V +L + S +R
Sbjct: 46 ILVATVASLCHMLEKHIFRIDSVRVLVVDEVDFLFYSSKQVG---SVRKLLTSFSSCDKR 102
Query: 285 QTMLFSATMP------------GWVKK-LSRKYLNNPLTIDLVGDEEEKLAEGIKLYALS 331
QT+ SA++P W K+ + +++ + + L + E
Sbjct: 103 QTVFASASIPQHKHFVHDCIQQKWTKRDVVHVHVSAIMPMPLCLLHRFVMCE-------- 154
Query: 332 ATSTSKRTILTDLITVYAKGGKTIVFT-----QTKRDADEVSLAL---------TSSITS 377
T+K +L L+ A I+F ++K+ ++ S L S+
Sbjct: 155 --KTNKHQVLLALLESDAPES-AIIFVGEQSEKSKKAGNDPSTTLLMEFLKTSYKGSLEI 211
Query: 378 EALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHR 437
L GD++ + R +L RQG +LV+TD+AARG+D+P I +++LP ++HR
Sbjct: 212 LLLEGDMNFNSRAASLTEIRQGGGFLLVSTDIAARGIDLPETTHIFNFDLPQTVTDYLHR 271
Query: 438 SGRTGR 443
+GR GR
Sbjct: 272 AGRAGR 277
>AT4G35740.1 | Symbols: RecQl3, ATRECQ3 | DEAD/DEAH box RNA helicase
family protein | chr4:16936233-16940172 FORWARD
LENGTH=713
Length = 713
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 63/130 (48%), Gaps = 3/130 (2%)
Query: 342 TDLITVYAKGGK--TIVFTQTKRDADEVSLALTS-SITSEALHGDISQHQRERTLNGFRQ 398
TDL + G I++ + D++S+ L+S I+S A H ++ R L+ +
Sbjct: 245 TDLGNLLKSCGNICAIIYCLERTTCDDLSVHLSSIGISSAAYHAGLNSKMRSTVLDDWLS 304
Query: 399 GKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKLGNAILMYTNSQ 458
K ++VAT G+D +V ++ H+ +P E+F SGR GR ++L Y
Sbjct: 305 SKKQIIVATVAFGMGIDKKDVRMVCHFNIPKSMESFYQESGRAGRDQLPSRSVLYYGVDD 364
Query: 459 RRTVRSLERD 468
R+ + L R+
Sbjct: 365 RKKMEYLLRN 374
>AT4G35740.2 | Symbols: RecQl3, ATRECQ3 | DEAD/DEAH box RNA helicase
family protein | chr4:16936788-16940172 FORWARD
LENGTH=620
Length = 620
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 63/130 (48%), Gaps = 3/130 (2%)
Query: 342 TDLITVYAKGGK--TIVFTQTKRDADEVSLALTS-SITSEALHGDISQHQRERTLNGFRQ 398
TDL + G I++ + D++S+ L+S I+S A H ++ R L+ +
Sbjct: 152 TDLGNLLKSCGNICAIIYCLERTTCDDLSVHLSSIGISSAAYHAGLNSKMRSTVLDDWLS 211
Query: 399 GKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKLGNAILMYTNSQ 458
K ++VAT G+D +V ++ H+ +P E+F SGR GR ++L Y
Sbjct: 212 SKKQIIVATVAFGMGIDKKDVRMVCHFNIPKSMESFYQESGRAGRDQLPSRSVLYYGVDD 271
Query: 459 RRTVRSLERD 468
R+ + L R+
Sbjct: 272 RKKMEYLLRN 281
>AT1G31360.1 | Symbols: RECQL2, ATRECQ2, MED34 | RECQ helicase L2 |
chr1:11232422-11237412 FORWARD LENGTH=705
Length = 705
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 57/111 (51%), Gaps = 1/111 (0%)
Query: 348 YAKGGKTIVFTQTKRDADEVSLALTS-SITSEALHGDISQHQRERTLNGFRQGKFTVLVA 406
Y+ IV+ ++++ ++++ L I+++ H D+ + RE+ + + K V+V
Sbjct: 310 YSNNESGIVYCFSRKECEQIAGDLRERGISADYYHADMDANMREKVHMRWSKNKLQVIVG 369
Query: 407 TDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKLGNAILMYTNS 457
T G++ P+V +IH+ L ET+ SGR GR G IL + ++
Sbjct: 370 TVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECILFFRSA 420
>AT1G31360.2 | Symbols: RECQL2, MED34 | RECQ helicase L2 |
chr1:11233174-11237412 FORWARD LENGTH=580
Length = 580
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 57/111 (51%), Gaps = 1/111 (0%)
Query: 348 YAKGGKTIVFTQTKRDADEVSLALTSS-ITSEALHGDISQHQRERTLNGFRQGKFTVLVA 406
Y+ IV+ ++++ ++++ L I+++ H D+ + RE+ + + K V+V
Sbjct: 185 YSNNESGIVYCFSRKECEQIAGDLRERGISADYYHADMDANMREKVHMRWSKNKLQVIVG 244
Query: 407 TDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKLGNAILMYTNS 457
T G++ P+V +IH+ L ET+ SGR GR G IL + ++
Sbjct: 245 TVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECILFFRSA 295
>AT1G35530.2 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr1:13089994-13097078 FORWARD LENGTH=1390
Length = 1390
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 63/149 (42%), Gaps = 21/149 (14%)
Query: 385 SQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRA 444
SQ ++ L FR G F V+VAT + GLDI VDL+I ++ P + R GRTGR
Sbjct: 512 SQKIQQAVLEKFRAGGFNVIVATSIGEEGLDIMEVDLVICFDANVSPLRMIQRMGRTGRK 571
Query: 445 GKLGNAIL------------MYTNSQRRTVRSLERDVGCK-FEFVNPPAMEEVLAASADQ 491
G +L M + R ++ R+ G F F P M + Q
Sbjct: 572 NN-GRPLLVLACEGSEKNSYMRKQASGRAIKKHMRNGGTNSFNFHPSPRMIPHVYKPEVQ 630
Query: 492 VVATLNGVHPESIEFFTPTAQKLIEEQGT 520
V SI+ F P +KL EE T
Sbjct: 631 HVEF-------SIKQFVPRGKKLQEEYAT 652
>AT1G35530.1 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr1:13089994-13097078 FORWARD LENGTH=1324
Length = 1324
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 34/59 (57%)
Query: 385 SQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGR 443
SQ ++ L FR G F V+VAT + GLDI VDL+I ++ P + R GRTGR
Sbjct: 512 SQKIQQAVLEKFRAGGFNVIVATSIGEEGLDIMEVDLVICFDANVSPLRMIQRMGRTGR 570
>AT3G02060.2 | Symbols: | DEAD/DEAH box helicase, putative |
chr3:354412-358319 FORWARD LENGTH=822
Length = 822
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 44/92 (47%), Gaps = 9/92 (9%)
Query: 381 HGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETF-----V 435
HG Q E T+ F QGK +L+ T++ GLDI N + II D + F
Sbjct: 512 HGKQYSKQLEETMERFAQGKIKILICTNIVESGLDIQNANTII----IQDVQQFGLAQLY 567
Query: 436 HRSGRTGRAGKLGNAILMYTNSQRRTVRSLER 467
GR GRA K +A L Y + + ++LER
Sbjct: 568 QLRGRVGRADKEAHAYLFYPDKSLLSDQALER 599
>AT3G02060.1 | Symbols: | DEAD/DEAH box helicase, putative |
chr3:354409-358319 FORWARD LENGTH=823
Length = 823
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 44/92 (47%), Gaps = 9/92 (9%)
Query: 381 HGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETF-----V 435
HG Q E T+ F QGK +L+ T++ GLDI N + II D + F
Sbjct: 513 HGKQYSKQLEETMERFAQGKIKILICTNIVESGLDIQNANTII----IQDVQQFGLAQLY 568
Query: 436 HRSGRTGRAGKLGNAILMYTNSQRRTVRSLER 467
GR GRA K +A L Y + + ++LER
Sbjct: 569 QLRGRVGRADKEAHAYLFYPDKSLLSDQALER 600
>AT5G27680.1 | Symbols: RECQSIM | RECQ helicase SIM |
chr5:9794244-9798637 REVERSE LENGTH=858
Length = 858
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 48/102 (47%), Gaps = 1/102 (0%)
Query: 352 GKTIVFTQTKRDADEVSLALTS-SITSEALHGDISQHQRERTLNGFRQGKFTVLVATDVA 410
G TI++ T++++ ++ L + + A + + + + F K V+VAT
Sbjct: 498 GLTIIYVPTRKESVNIAKYLCGVGLKAAAYNASLPKKHLRQVHQDFHDNKLQVVVATIAF 557
Query: 411 ARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKLGNAIL 452
G+D NV IIHY E + +GR GR G+L +L
Sbjct: 558 GMGIDKKNVRKIIHYGWLQSLEAYYQEAGRAGRDGELAECVL 599