Miyakogusa Predicted Gene
- Lj1g3v4807560.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v4807560.1 tr|G4TKH3|G4TKH3_PIRID Related to G-patch-domain
Zn-finger DNA-binding protein-Laccaria bicolor
OS=P,37.06,6e-18,ZINC_FINGER_C2H2_1,Zinc finger, C2H2; G-patch,G-patch
domain; zf-C2H2_jaz,Zinc finger,
double-strand,NODE_61527_length_1387_cov_30.786591.path2.1
(304 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G26610.3 | Symbols: | D111/G-patch domain-containing protein... 313 8e-86
AT5G26610.2 | Symbols: | D111/G-patch domain-containing protein... 313 8e-86
AT5G26610.1 | Symbols: | D111/G-patch domain-containing protein... 313 8e-86
AT2G42330.2 | Symbols: | GC-rich sequence DNA-binding factor-li... 57 1e-08
AT2G42330.1 | Symbols: | GC-rich sequence DNA-binding factor-li... 57 1e-08
AT3G52350.1 | Symbols: | D111/G-patch domain-containing protein... 55 6e-08
AT1G17070.1 | Symbols: | GC-rich sequence DNA-binding factor-li... 55 7e-08
AT3G54230.2 | Symbols: SUA | suppressor of abi3-5 | chr3:2007387... 51 1e-06
AT3G54230.1 | Symbols: SUA | suppressor of abi3-5 | chr3:2007387... 51 1e-06
AT3G57910.1 | Symbols: | D111/G-patch domain-containing protein... 50 3e-06
AT5G08535.1 | Symbols: | D111/G-patch domain-containing protein... 49 4e-06
AT5G08535.2 | Symbols: | D111/G-patch domain-containing protein... 48 7e-06
>AT5G26610.3 | Symbols: | D111/G-patch domain-containing protein |
chr5:9375456-9376991 FORWARD LENGTH=301
Length = 301
Score = 313 bits (803), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 172/288 (59%), Positives = 213/288 (73%), Gaps = 9/288 (3%)
Query: 20 FKKEEAHQDSLIGDLAEDFRLPINHRPTENVDLENVEQASLDTQLTSSNIGFKLLQKMGW 79
++K++ +Q+S I LAE+FRLPI HR TENVDLE+VEQASLD +++SSN+GF+LLQKMGW
Sbjct: 20 YEKDQMNQESFIEGLAEEFRLPITHRVTENVDLEDVEQASLDVKISSSNVGFRLLQKMGW 79
Query: 80 KGKGLGKDEQGIIEPIKSGMRDPRLGLGKQEEDDFFTAEENIQRKKLDVELEETEENVRK 139
KGKGLGK EQGI EPIKSG+RD RLGLGKQEEDD+FTAEENIQRKKLD+E+EETEE +K
Sbjct: 80 KGKGLGKQEQGITEPIKSGIRDRRLGLGKQEEDDYFTAEENIQRKKLDIEIEETEEIAKK 139
Query: 140 REVLAEREQKIQTEVKEIRKVFYCDLCNKQYKLAMEFEAHLSSYDHNHRKRFKQMKEMHG 199
REVLAEREQKIQ++VKEIRKVFYC+LC+KQY+ MEFE HLSSYDHNH+KRFK+MKEMHG
Sbjct: 140 REVLAEREQKIQSDVKEIRKVFYCELCSKQYRTVMEFEGHLSSYDHNHKKRFKEMKEMHG 199
Query: 200 GSSRDDXXXXXXXXXXXXIAKFAQIADAQKQQRLQLLQESGSE--PVSSETRTAT-PLTD 256
S RD+ + K +ADA+KQ ++Q Q+ E PVS+ +T PL
Sbjct: 200 ASGRDERKKREQQRQEREMTK---MADARKQHQMQQSQQEVPENVPVSAPAKTTVAPLAV 256
Query: 257 QEQRNALXXXXXXXXXXXXNVIGPKRQMVAKKQNIPVSSIFNNDSDEE 304
Q+QR L P + KK + ++S+F NDSDE+
Sbjct: 257 QDQRKTLKFGFSSKSGIISKS-QPTSSI--KKPKVAIASVFGNDSDED 301
>AT5G26610.2 | Symbols: | D111/G-patch domain-containing protein |
chr5:9375456-9376991 FORWARD LENGTH=301
Length = 301
Score = 313 bits (803), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 172/288 (59%), Positives = 213/288 (73%), Gaps = 9/288 (3%)
Query: 20 FKKEEAHQDSLIGDLAEDFRLPINHRPTENVDLENVEQASLDTQLTSSNIGFKLLQKMGW 79
++K++ +Q+S I LAE+FRLPI HR TENVDLE+VEQASLD +++SSN+GF+LLQKMGW
Sbjct: 20 YEKDQMNQESFIEGLAEEFRLPITHRVTENVDLEDVEQASLDVKISSSNVGFRLLQKMGW 79
Query: 80 KGKGLGKDEQGIIEPIKSGMRDPRLGLGKQEEDDFFTAEENIQRKKLDVELEETEENVRK 139
KGKGLGK EQGI EPIKSG+RD RLGLGKQEEDD+FTAEENIQRKKLD+E+EETEE +K
Sbjct: 80 KGKGLGKQEQGITEPIKSGIRDRRLGLGKQEEDDYFTAEENIQRKKLDIEIEETEEIAKK 139
Query: 140 REVLAEREQKIQTEVKEIRKVFYCDLCNKQYKLAMEFEAHLSSYDHNHRKRFKQMKEMHG 199
REVLAEREQKIQ++VKEIRKVFYC+LC+KQY+ MEFE HLSSYDHNH+KRFK+MKEMHG
Sbjct: 140 REVLAEREQKIQSDVKEIRKVFYCELCSKQYRTVMEFEGHLSSYDHNHKKRFKEMKEMHG 199
Query: 200 GSSRDDXXXXXXXXXXXXIAKFAQIADAQKQQRLQLLQESGSE--PVSSETRTAT-PLTD 256
S RD+ + K +ADA+KQ ++Q Q+ E PVS+ +T PL
Sbjct: 200 ASGRDERKKREQQRQEREMTK---MADARKQHQMQQSQQEVPENVPVSAPAKTTVAPLAV 256
Query: 257 QEQRNALXXXXXXXXXXXXNVIGPKRQMVAKKQNIPVSSIFNNDSDEE 304
Q+QR L P + KK + ++S+F NDSDE+
Sbjct: 257 QDQRKTLKFGFSSKSGIISKS-QPTSSI--KKPKVAIASVFGNDSDED 301
>AT5G26610.1 | Symbols: | D111/G-patch domain-containing protein |
chr5:9375456-9376991 FORWARD LENGTH=301
Length = 301
Score = 313 bits (803), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 172/288 (59%), Positives = 213/288 (73%), Gaps = 9/288 (3%)
Query: 20 FKKEEAHQDSLIGDLAEDFRLPINHRPTENVDLENVEQASLDTQLTSSNIGFKLLQKMGW 79
++K++ +Q+S I LAE+FRLPI HR TENVDLE+VEQASLD +++SSN+GF+LLQKMGW
Sbjct: 20 YEKDQMNQESFIEGLAEEFRLPITHRVTENVDLEDVEQASLDVKISSSNVGFRLLQKMGW 79
Query: 80 KGKGLGKDEQGIIEPIKSGMRDPRLGLGKQEEDDFFTAEENIQRKKLDVELEETEENVRK 139
KGKGLGK EQGI EPIKSG+RD RLGLGKQEEDD+FTAEENIQRKKLD+E+EETEE +K
Sbjct: 80 KGKGLGKQEQGITEPIKSGIRDRRLGLGKQEEDDYFTAEENIQRKKLDIEIEETEEIAKK 139
Query: 140 REVLAEREQKIQTEVKEIRKVFYCDLCNKQYKLAMEFEAHLSSYDHNHRKRFKQMKEMHG 199
REVLAEREQKIQ++VKEIRKVFYC+LC+KQY+ MEFE HLSSYDHNH+KRFK+MKEMHG
Sbjct: 140 REVLAEREQKIQSDVKEIRKVFYCELCSKQYRTVMEFEGHLSSYDHNHKKRFKEMKEMHG 199
Query: 200 GSSRDDXXXXXXXXXXXXIAKFAQIADAQKQQRLQLLQESGSE--PVSSETRTAT-PLTD 256
S RD+ + K +ADA+KQ ++Q Q+ E PVS+ +T PL
Sbjct: 200 ASGRDERKKREQQRQEREMTK---MADARKQHQMQQSQQEVPENVPVSAPAKTTVAPLAV 256
Query: 257 QEQRNALXXXXXXXXXXXXNVIGPKRQMVAKKQNIPVSSIFNNDSDEE 304
Q+QR L P + KK + ++S+F NDSDE+
Sbjct: 257 QDQRKTLKFGFSSKSGIISKS-QPTSSI--KKPKVAIASVFGNDSDED 301
>AT2G42330.2 | Symbols: | GC-rich sequence DNA-binding factor-like
protein with Tuftelin interacting domain |
chr2:17631831-17634089 REVERSE LENGTH=752
Length = 752
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 45/73 (61%), Gaps = 4/73 (5%)
Query: 66 SSNIGFKLLQKMGWKGKGLGKDEQGIIEPIKSGMRDPRLGLG----KQEEDDFFTAEENI 121
S IG KLL+KMG+KG+GLGK++QGI+ PI+ +R +G+G K++ F +
Sbjct: 103 SGGIGMKLLEKMGYKGRGLGKNQQGIVAPIEVQLRPKNMGMGYNDFKEKNAPLFPCLNKV 162
Query: 122 QRKKLDVELEETE 134
+ KK V + +E
Sbjct: 163 EEKKKSVVVTVSE 175
>AT2G42330.1 | Symbols: | GC-rich sequence DNA-binding factor-like
protein with Tuftelin interacting domain |
chr2:17631831-17634089 REVERSE LENGTH=752
Length = 752
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 45/73 (61%), Gaps = 4/73 (5%)
Query: 66 SSNIGFKLLQKMGWKGKGLGKDEQGIIEPIKSGMRDPRLGLG----KQEEDDFFTAEENI 121
S IG KLL+KMG+KG+GLGK++QGI+ PI+ +R +G+G K++ F +
Sbjct: 103 SGGIGMKLLEKMGYKGRGLGKNQQGIVAPIEVQLRPKNMGMGYNDFKEKNAPLFPCLNKV 162
Query: 122 QRKKLDVELEETE 134
+ KK V + +E
Sbjct: 163 EEKKKSVVVTVSE 175
>AT3G52350.1 | Symbols: | D111/G-patch domain-containing protein |
chr3:19409606-19410148 REVERSE LENGTH=180
Length = 180
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 42/60 (70%), Gaps = 1/60 (1%)
Query: 49 NVDLENVEQASLDTQLTSSNIGFKLLQKMGWK-GKGLGKDEQGIIEPIKSGMRDPRLGLG 107
NV ++ E ++ T ++SSNIGF+LL+K GWK G GLG EQGI+ P+++ + + GLG
Sbjct: 62 NVIGDSSESSNPSTAISSSNIGFQLLKKHGWKEGTGLGITEQGILVPLQAEPKHNKQGLG 121
>AT1G17070.1 | Symbols: | GC-rich sequence DNA-binding factor-like
protein with Tuftelin interacting domain |
chr1:5837653-5840202 FORWARD LENGTH=849
Length = 849
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 34/43 (79%)
Query: 65 TSSNIGFKLLQKMGWKGKGLGKDEQGIIEPIKSGMRDPRLGLG 107
++ IG KLL+KMG+KG GLGK++QGI+ PI++ +R +G+G
Sbjct: 199 STKGIGMKLLEKMGYKGGGLGKNQQGIVAPIEAQLRPKNMGMG 241
>AT3G54230.2 | Symbols: SUA | suppressor of abi3-5 |
chr3:20073872-20080142 FORWARD LENGTH=1008
Length = 1008
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 38/66 (57%), Gaps = 14/66 (21%)
Query: 67 SNIGFKLLQKMGW-KGKGLGKDEQGIIEPIKSGMRDPRLGLGKQEEDDFFTAEENIQRKK 125
SN+G ++L+ MGW +G GLGKD G+ EP+++ D R GLG Q+ KK
Sbjct: 930 SNVGNRMLRNMGWHEGSGLGKDGSGMKEPVQAQGVDRRAGLGSQQ-------------KK 976
Query: 126 LDVELE 131
+D E E
Sbjct: 977 VDAEFE 982
>AT3G54230.1 | Symbols: SUA | suppressor of abi3-5 |
chr3:20073872-20080142 FORWARD LENGTH=1007
Length = 1007
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 38/66 (57%), Gaps = 14/66 (21%)
Query: 67 SNIGFKLLQKMGW-KGKGLGKDEQGIIEPIKSGMRDPRLGLGKQEEDDFFTAEENIQRKK 125
SN+G ++L+ MGW +G GLGKD G+ EP+++ D R GLG Q+ KK
Sbjct: 929 SNVGNRMLRNMGWHEGSGLGKDGSGMKEPVQAQGVDRRAGLGSQQ-------------KK 975
Query: 126 LDVELE 131
+D E E
Sbjct: 976 VDAEFE 981
>AT3G57910.1 | Symbols: | D111/G-patch domain-containing protein |
chr3:21442771-21443968 FORWARD LENGTH=265
Length = 265
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 60 LDTQLTSSNIGFKLLQKMGWK-GKGLGKDEQGIIEPIKSGMRDPRLGLGKQE 110
+DT + SNIGFKLL++MG+K G LGK G EP+ +R R G+G+++
Sbjct: 87 VDTPIGESNIGFKLLKQMGYKPGSALGKQGSGRAEPVTMDIRRSRAGVGRED 138
>AT5G08535.1 | Symbols: | D111/G-patch domain-containing protein |
chr5:2762455-2763320 FORWARD LENGTH=141
Length = 141
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 60/104 (57%), Gaps = 6/104 (5%)
Query: 64 LTSSNIGFKLLQKMGWK-GKGLGKDEQGIIEPIKSGMRDPRLGLGKQEEDDFFTAEENIQ 122
+ SSNIGF+LL+K GWK G GLG EQGI+ P+++ + + G+G ++ A+ +
Sbjct: 39 INSSNIGFQLLKKHGWKEGTGLGIAEQGILVPLQAEPKHNKRGVGAKQPAKRKVAQPQAK 98
Query: 123 RKKLDVELEETEENVRKREVLAEREQKIQTEVKEIRKVFYCDLC 166
+++ + ++ + +RK + E E+ +Q KE + F+ +
Sbjct: 99 DEEVSKQSKKLSKKMRK---MMEHEKHLQE--KEFERAFFREFW 137
>AT5G08535.2 | Symbols: | D111/G-patch domain-containing protein |
chr5:2762722-2763320 FORWARD LENGTH=116
Length = 116
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 60/104 (57%), Gaps = 6/104 (5%)
Query: 64 LTSSNIGFKLLQKMGWK-GKGLGKDEQGIIEPIKSGMRDPRLGLGKQEEDDFFTAEENIQ 122
+ SSNIGF+LL+K GWK G GLG EQGI+ P+++ + + G+G ++ A+ +
Sbjct: 14 INSSNIGFQLLKKHGWKEGTGLGIAEQGILVPLQAEPKHNKRGVGAKQPAKRKVAQPQAK 73
Query: 123 RKKLDVELEETEENVRKREVLAEREQKIQTEVKEIRKVFYCDLC 166
+++ + ++ + +RK + E E+ +Q KE + F+ +
Sbjct: 74 DEEVSKQSKKLSKKMRK---MMEHEKHLQE--KEFERAFFREFW 112