Miyakogusa Predicted Gene

Lj1g3v4794010.3

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4794010.3 Non Chatacterized Hit- tr|I1I2P8|I1I2P8_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,26.26,0.00000000000001,seg,NULL; DDT,DDT domain superfamily;
coiled-coil,NULL,CUFF.33277.3
         (420 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G67270.1 | Symbols:  | Zinc-finger domain of monoamine-oxidas...   155   6e-38
AT1G67780.1 | Symbols:  | Zinc-finger domain of monoamine-oxidas...   154   1e-37
AT5G38690.1 | Symbols:  | Zinc-finger domain of monoamine-oxidas...   154   1e-37

>AT1G67270.1 | Symbols:  | Zinc-finger domain of monoamine-oxidase A
           repressor R1 protein | chr1:25183177-25185793 REVERSE
           LENGTH=541
          Length = 541

 Score =  155 bits (391), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 112/332 (33%), Positives = 162/332 (48%), Gaps = 19/332 (5%)

Query: 93  GKKSKEVKDEISEEVLLPPGTDLTEVLGIEFPHEDVGNVVQFLQFCRVFGKNLNMKEGEA 152
            K S ++K+EI  E  LP G  LT V  I+ P E+ GNV Q  +FC  FGK L +KEG A
Sbjct: 184 AKPSDKLKEEIQLEAQLPEGISLTCVSRIDIPTEEAGNVCQLFEFCSAFGKALALKEGHA 243

Query: 153 KTILRELDRKQNLRSGENTLAVEFQXXXXXXXX---XAAGHKSPSLATADGNFSWLKALG 209
           +TI+REL        G NT   ++              +  +  SL+ +  + SW  A+G
Sbjct: 244 ETIVREL-----FICGRNTRRQQYCSITQMMIQLLDLISKDREMSLSLSATDSSWFTAIG 298

Query: 210 DLALQSPLLLKDFPVEMLNEGLSGYCNLSLSDKLRLLTFICDEVLNSEKVRSYIEKENSK 269
           ++  +S +L  + P+E    G++ Y  ++ S KL+LL F+CDE L++  +R+YI  +  +
Sbjct: 299 EILSKSEVLSDELPLETFVGGVAAYEKMNASRKLKLLNFLCDESLSTWAMRNYINSQTEE 358

Query: 270 IXXXXXXXXXXXXXXXXXVNSLKQKLQEETAKRIHSSGDPGSSTEQDAAVLKLLTTEVAQ 329
                                LKQK+Q E AK I        S E+  +++  +  E  +
Sbjct: 359 CGERKKEAKQKAAAAKQKEKQLKQKMQGEVAKSIMEKNGAPLSIEEHNSIVSQIRDEAKE 418

Query: 330 AHSEMLEAKEKIPKRK-ISDATRIEPHFVDGRK-VFWKFKCFEGEDTLLLQDIKVQEGDG 387
           AH EM+EAK    K   I DA R EP  +D    V WK KCFE E   LLQD+      G
Sbjct: 419 AHEEMMEAKGMKSKMTLICDARRTEPIMLDDNGFVLWKLKCFEEEQFFLLQDL------G 472

Query: 388 T---AATDERWFFYGPEKKNDIDKYIASRAKR 416
           T       ERW  + PE+K +I+     R K+
Sbjct: 473 TFDDLCPHERWLAFKPEQKPEIENISLVRGKK 504


>AT1G67780.1 | Symbols:  | Zinc-finger domain of monoamine-oxidase A
           repressor R1 protein | chr1:25412816-25415530 FORWARD
           LENGTH=512
          Length = 512

 Score =  154 bits (389), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/328 (32%), Positives = 163/328 (49%), Gaps = 18/328 (5%)

Query: 96  SKEVKDEISEEVLLPPGTDLTEVLGIEFPHEDVGNVVQFLQFCRVFGKNLNMKEGEAKTI 155
           + ++K+EI  E  LP G  L  V G+  P E+ GNV Q  +FC  FGK L +KEG+A+T+
Sbjct: 184 THKLKEEIQFEAQLPQGISLISVSGVVIPTEEAGNVFQLFEFCSAFGKALELKEGQAETV 243

Query: 156 LRELDRKQNLRSGENTLAVEFQXXXXXXXX-----XAAGHKSPSLATADGNFSWLKALGD 210
           +REL        G NT   ++                    S SL+ +D   +W  ALG+
Sbjct: 244 VREL-----FSCGRNTRRQQYCSIIQLMIQLLDLISKDREMSLSLSVSD---NWFTALGE 295

Query: 211 LALQSPLLLKDFPVEMLNEGLSGYCNLSLSDKLRLLTFICDEVLNSEKVRSYIEKENSKI 270
           + LQS +L  +FP E    G++ Y  +  S +L+LL F+CDE L++  +R+ I+ ++++ 
Sbjct: 296 ILLQSEVLSDEFPPETFETGVAEYEKMDASRRLKLLNFVCDESLSTWAMRNCIKSQSTEC 355

Query: 271 XXXXXXXXXXXXXXXXXVNSLKQKLQEETAKRIHSSGDPGSSTEQDAAVLKLLTTEVAQA 330
                               LKQKLQ + AK I        S E+   +L  +  E  +A
Sbjct: 356 KANNNEAKRKAAAAKEKEKQLKQKLQGDLAKAIMKKNGAPLSIEEHNEILSQIRAEAKEA 415

Query: 331 HSEMLEAKEKIP-KRKISDATRIEPHFV-DGRKVFWKFKCFEGEDTLLLQDIKVQEGDGT 388
           H  M+EAK       +I DA R EP  V D   V WK  C++ E   LLQD+   +G   
Sbjct: 416 HDGMMEAKGITSGMTRICDARRTEPIMVEDNGLVLWKLNCYDEEPKFLLQDLGTFDG--- 472

Query: 389 AATDERWFFYGPEKKNDIDKYIASRAKR 416
             + E+W  + PE+K DI+ YI+ + ++
Sbjct: 473 LCSHEKWLAFKPEQKPDIENYISYKRRK 500


>AT5G38690.1 | Symbols:  | Zinc-finger domain of monoamine-oxidase A
           repressor R1 protein | chr5:15479424-15482992 REVERSE
           LENGTH=572
          Length = 572

 Score =  154 bits (388), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 104/323 (32%), Positives = 163/323 (50%), Gaps = 13/323 (4%)

Query: 100 KDEISEEVLLPPGTDLTEVLGIEFPHEDVGNVVQFLQFCRVFGKNLNMKEGEAKTILREL 159
           K+E   E+ +P G     V GI+   ED GNV QFL+FC  FGK L++++G+A+ ++RE+
Sbjct: 245 KEEDQVEIKIPQGNISITVSGIDLAPEDAGNVFQFLEFCSAFGKALDLRKGQAECVIREM 304

Query: 160 DRKQNLRSGENTLAVEFQXXXXXXXXXAAGHKSPSLATADGNFSWLKALGDLALQSPLLL 219
              ++ R  + +   +             G  S  L+  D   SW   +G+   +S + L
Sbjct: 305 LSGRSKRRQQYSTLTQMIIQLLTVILEDRGETSVCLSATDP--SWFTTIGECLSESEVKL 362

Query: 220 KDFPVEMLNEGLSGYCNLSLSDKLRLLTFICDEVLNSEKVRSYIEKENSKIXXXXXXXXX 279
            DFP EM  +G+S Y  L+ S +L+LL F+CDE L +  +R+ I+ +N +          
Sbjct: 363 DDFPPEMFEKGISQYEKLNSSKRLKLLNFLCDETLGTLVMRNCIDSQNIESVERKKEAKE 422

Query: 280 XXXXXXXXVNSLKQKLQEETAKRIHS-SGDPGSSTEQDAAVLKLLTTEVAQAHSEMLEAK 338
                      LKQKLQ+E A+ + + +G P   TE DA V + +  E  + +SEM  A 
Sbjct: 423 KINAAKDKEKQLKQKLQDELAQAVKAKNGIPLLITEHDAIVSR-INAETQEVYSEMQNAI 481

Query: 339 EKIPKRK--ISDATRIEP-HFVDGRKVFWKFKCFEGEDTLLLQDIKVQEGD-GTAATDER 394
           + + K+     DA R  P    D   +FW+ K +  E  +LLQD+    G        E+
Sbjct: 482 DMLSKKSQGSDDAVRTNPVELDDNGLIFWRLKSYNDEQNILLQDL----GSWNEVCPHEK 537

Query: 395 WFFYGPEKKNDIDKYIA-SRAKR 416
           WF +  E+K +I+KYI+  R KR
Sbjct: 538 WFSFSSEQKPEIEKYISFIRMKR 560