Miyakogusa Predicted Gene

Lj1g3v4794010.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4794010.2 Non Chatacterized Hit- tr|I1N6P3|I1N6P3_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.47847 PE,57.65,6e-16,
,CUFF.33277.2
         (87 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G67780.1 | Symbols:  | Zinc-finger domain of monoamine-oxidas...    53   5e-08
AT1G67270.1 | Symbols:  | Zinc-finger domain of monoamine-oxidas...    50   3e-07

>AT1G67780.1 | Symbols:  | Zinc-finger domain of monoamine-oxidase A
           repressor R1 protein | chr1:25412816-25415530 FORWARD
           LENGTH=512
          Length = 512

 Score = 52.8 bits (125), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 31/85 (36%), Positives = 46/85 (54%), Gaps = 5/85 (5%)

Query: 1   MLEAKEKIP-KRKISDATRIEPHFV-DGRKVFWKFKCFEGEDTLLLQDIKVQEGDGTAAT 58
           M+EAK       +I DA R EP  V D   V WK  C++ E   LLQD+   +G     +
Sbjct: 419 MMEAKGITSGMTRICDARRTEPIMVEDNGLVLWKLNCYDEEPKFLLQDLGTFDG---LCS 475

Query: 59  DERWFFYGPEKKNDIDKYIASRAKR 83
            E+W  + PE+K DI+ YI+ + ++
Sbjct: 476 HEKWLAFKPEQKPDIENYISYKRRK 500


>AT1G67270.1 | Symbols:  | Zinc-finger domain of monoamine-oxidase A
           repressor R1 protein | chr1:25183177-25185793 REVERSE
           LENGTH=541
          Length = 541

 Score = 50.4 bits (119), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 35/88 (39%), Positives = 43/88 (48%), Gaps = 11/88 (12%)

Query: 1   MLEAKEKIPKRK-ISDATRIEPHFVDGRK-VFWKFKCFEGEDTLLLQDIKVQEGDGT--- 55
           M+EAK    K   I DA R EP  +D    V WK KCFE E   LLQD+      GT   
Sbjct: 423 MMEAKGMKSKMTLICDARRTEPIMLDDNGFVLWKLKCFEEEQFFLLQDL------GTFDD 476

Query: 56  AATDERWFFYGPEKKNDIDKYIASRAKR 83
               ERW  + PE+K +I+     R K+
Sbjct: 477 LCPHERWLAFKPEQKPEIENISLVRGKK 504