Miyakogusa Predicted Gene
- Lj1g3v4790660.3
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v4790660.3 Non Chatacterized Hit- tr|I1NBR0|I1NBR0_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.19278
PE,84.12,0,HAD-like,HAD-like domain; NHL repeat,NULL;
Thioredoxin-like,Thioredoxin-like fold; seg,NULL; NHL,NHL,CUFF.33254.3
(1089 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G56500.1 | Symbols: | haloacid dehalogenase-like hydrolase f... 1498 0.0
AT3G07060.1 | Symbols: emb1974 | NHL domain-containing protein |... 76 1e-13
AT4G21470.1 | Symbols: ATFMN/FHY, FMN/FHY | riboflavin kinase/FM... 63 1e-09
AT3G48420.1 | Symbols: | Haloacid dehalogenase-like hydrolase (... 62 2e-09
AT2G38740.1 | Symbols: | Haloacid dehalogenase-like hydrolase (... 52 2e-06
AT3G14860.1 | Symbols: | NHL domain-containing protein | chr3:4... 51 6e-06
AT3G14860.2 | Symbols: | NHL domain-containing protein | chr3:4... 51 6e-06
>AT1G56500.1 | Symbols: | haloacid dehalogenase-like hydrolase family
protein | chr1:21159775-21167092 FORWARD LENGTH=1055
Length = 1055
Score = 1498 bits (3878), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 723/1056 (68%), Positives = 846/1056 (80%), Gaps = 35/1056 (3%)
Query: 35 PTSLPSRFFHCRSKRLVFTPRLITRACAVKV----EEKDVAGKSGEWGRVSAVLFDMDGV 90
P S F RS+ V+ + + K+ E + +WG+VSAVLFDMDGV
Sbjct: 25 PIRSKSTFTGFRSRTGVYLSKTTALQSSTKLSVAAESPAATIATDDWGKVSAVLFDMDGV 84
Query: 91 LCNSEEPSRRAGVDVFAEIGVQVTVDDFVPFMGTGEANFLGGVASVKGVKGFDPEAAKKR 150
LCNSE+ SRRA VDVF E+GV+VTVDDFVPFMGTGEA FLGGVASVK VKGFDP+AAK+R
Sbjct: 85 LCNSEDLSRRAAVDVFTEMGVEVTVDDFVPFMGTGEAKFLGGVASVKEVKGFDPDAAKER 144
Query: 151 FFEIYLEKYAKPDSGIGFPGALELISQCKSKGLKVAVASSADRIKVDANLAAAGLPLSLF 210
FFEIYL+KYAKP+SGIGFPGALEL+++CK+KGLKVAVASSADRIKVDANL AAGL L++F
Sbjct: 145 FFEIYLDKYAKPESGIGFPGALELVTECKNKGLKVAVASSADRIKVDANLKAAGLSLTMF 204
Query: 211 DAIVSADAFENLKPAPDIFLAASRILNVPPSECIVIEDXXXXXXXXXXXQMRCIAVRTTL 270
DAIVSADAFENLKPAPDIFLAA++IL VP SEC+VIED MRCIAV+TTL
Sbjct: 205 DAIVSADAFENLKPAPDIFLAAAKILGVPTSECVVIEDALAGVQAAQAANMRCIAVKTTL 264
Query: 271 SDEALEPAGPTFIRDDIGSVSLDEILNGGSDGYNKRMQGSQSLNNFAQTSTTMLAGKTDD 330
S+ L+ AGP+ IRDDIG++S+++IL GGSD + ST ML T
Sbjct: 265 SEAILKDAGPSMIRDDIGNISINDILTGGSDS--------------TRNSTAMLEENT-- 308
Query: 331 GVEKSSNGTDEGIFTTTGLQGSRRDILRFGSLGIAISCLVFTVSNWKAMQYTSPKAVWNL 390
S+ T + G QGSRRDILR+GSLGIA+SC+ F +NWKAMQY SPKA+WN
Sbjct: 309 ----VSDKT-----SANGFQGSRRDILRYGSLGIALSCVYFAATNWKAMQYASPKALWNA 359
Query: 391 LFGVTQPPLGQKEGNSRSDRIQQFVNYIADLESRGNTQVVPEFPSKLDWLNTAPLQFRRD 450
L G P Q +G R +QQFV+YIADLES+ VPEFPSKLDWLNTAPLQFRRD
Sbjct: 360 LVGAKSPSFTQNQGEGR---VQQFVDYIADLESKQTATTVPEFPSKLDWLNTAPLQFRRD 416
Query: 451 LKGKVVLLDFWTYCCINCMHVLPDLDFLEKKYKNMPFLVVGVHSAKFDNEKDSEAIRNAV 510
LKGKVV+LDFWTYCCINCMHVLPDL+FLEKKYK+MPF VVGVHSAKFDNEKD +AIRNAV
Sbjct: 417 LKGKVVILDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLDAIRNAV 476
Query: 511 LRYDITHPVVNDGDMYLWQKLGISSWPTFAIIGPNGKLLAQLAGEGRKKDLDDFVEAALL 570
LRYDI+HPVVNDGDMY+W++LGI+SWPTFA++ PNGK++AQ+AGEG +KDLDD V AAL
Sbjct: 477 LRYDISHPVVNDGDMYMWRELGINSWPTFAVVSPNGKVIAQIAGEGHRKDLDDVVAAALT 536
Query: 571 FYGKQNMLDDTPITLSLEKDNDPRLLTSPLKFPGKLAIDVLNNRLFISDSNHNRIVVTDL 630
+YG +N+LD TP+ LEKDNDPRL TSPLKFPGKLAID LNNRLFISDSNHNRI+VTDL
Sbjct: 537 YYGGKNVLDSTPLPTRLEKDNDPRLATSPLKFPGKLAIDTLNNRLFISDSNHNRIIVTDL 596
Query: 631 NGNFIVQIGSSGEEGLQDGSFDDATFNRPQGLAYNAKKNILYVADTENHALREIDFVNDK 690
GNFIVQIGSSGEEG QDGSF+DA FNRPQGLAYNAKKN+LYVADTENHALREIDFVN++
Sbjct: 597 EGNFIVQIGSSGEEGFQDGSFEDAAFNRPQGLAYNAKKNLLYVADTENHALREIDFVNER 656
Query: 691 VRTLAGNGTKGSDYIGGGKGDTQLLNSPWDVCFHPLEEKIYIAMAGQHQIWEHNILNGIT 750
V+TLAGNGTKGSDY GG KG QLLNSPWDVCF P+ EK+YIAMAGQHQIWE+++L+GIT
Sbjct: 657 VQTLAGNGTKGSDYQGGRKGTKQLLNSPWDVCFEPVNEKVYIAMAGQHQIWEYSVLDGIT 716
Query: 751 RAFSGDGYERNLNGXXXXXXXFAQPSGLSLSRDLTEIYVADSESSSIRAVDLKTGGSRLL 810
R FSG+GYERNLNG FAQPSG+SL DL E Y+ADSESSSIRA+DL+TGGSRLL
Sbjct: 717 RVFSGNGYERNLNGSTPQTTSFAQPSGISLGPDLKEAYIADSESSSIRALDLQTGGSRLL 776
Query: 811 AGGDPVFSDNLFKFGDQDGIGSEVLLQHPLGVLCGKDGEIYITDSYNHKIKKFDPTSKRV 870
AGGDP FS+NLFKFGD DG+G+EVLLQHPLGVLC DG+IY+TDSYNHKIKK DP +KRV
Sbjct: 777 AGGDPYFSENLFKFGDNDGVGAEVLLQHPLGVLCANDGQIYLTDSYNHKIKKLDPVTKRV 836
Query: 871 STIAGTGKAGFRDGTAVTAQLSEPSGIIEGNSGRLFIADTNNSIIRYLDLNTDE-FELHT 929
T+AGTGKAGF+DG AQLSEP+G+ +GRLF+ADTNNS+IRY+DLN E E+ T
Sbjct: 837 VTLAGTGKAGFKDGKVKGAQLSEPAGLAITENGRLFVADTNNSLIRYIDLNKGEDSEILT 896
Query: 930 LELKGFQPPKPKSRSFKRLRRRPSADTVPITIDAISSEEGNLSIDISLPNEYHFSKEARS 989
LELKG QPP PK++S KRLR+R SADT + +D+++S EG+L++ ISLP+ YHFSKEARS
Sbjct: 897 LELKGVQPPTPKAKSLKRLRKRASADTKIVKVDSVTSREGDLNLKISLPDGYHFSKEARS 956
Query: 990 RFSVDIESEGSVDIDPLDGLLSPEGSATLHFKRSSTSAAVGRINCKIYYCKEDAVCLYQS 1049
+F VD+E E +V IDP +G LSPEGS LHF +SSTSA+VG+I+CK+YYCKED VCLYQS
Sbjct: 957 KFVVDVEPENAVAIDPTEGTLSPEGSTMLHFIQSSTSASVGKISCKVYYCKEDEVCLYQS 1016
Query: 1050 LLFEVPFREGVSDSTRANVTLAHLVKPKTSASSLLQ 1085
+ FEVPF+ V A+ T+ V P+ + LQ
Sbjct: 1017 VQFEVPFK--VESELSASPTITFTVTPRAPDAGGLQ 1050
>AT3G07060.1 | Symbols: emb1974 | NHL domain-containing protein |
chr3:2232760-2236913 FORWARD LENGTH=774
Length = 774
Score = 76.3 bits (186), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 59/92 (64%), Gaps = 3/92 (3%)
Query: 600 LKFPGKLAIDVLNNRLFISDSNHNRIVVTDLNGNFIVQIGSSGEEGLQDGSFDDATFNRP 659
L FPG ++ D + +RLF+SD+NH+RI++ + +G + IG G +DG F+ A RP
Sbjct: 269 LYFPGCISADEVGDRLFLSDTNHHRIIIFENSGKIVDSIGCF--PGFEDGDFESAKMLRP 326
Query: 660 QGLAYNAKKNILYVADTENHALREIDFVNDKV 691
G Y+ ++ LY+ D+ENHA+R + +N +V
Sbjct: 327 TGTLYDEAEDCLYIVDSENHAIRRAN-INSRV 357
>AT4G21470.1 | Symbols: ATFMN/FHY, FMN/FHY | riboflavin kinase/FMN
hydrolase | chr4:11431284-11433197 FORWARD LENGTH=379
Length = 379
Score = 63.2 bits (152), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 81/187 (43%), Gaps = 6/187 (3%)
Query: 81 SAVLFDMDGVLCNSEEPSRRAGVDVFAEIGVQVTVDDFVPFMGTGEANFLGGVASVKGVK 140
S VL D+DG L N++ + G Q + + +G A+ V+
Sbjct: 12 SCVLIDLDGTLINTDGVVGDILRKYLCKYGKQWDGRESLKIVGKTPVE-----AATTIVE 66
Query: 141 GFDPEAAKKRF-FEIYLEKYAKPDSGIGFPGALELISQCKSKGLKVAVASSADRIKVDAN 199
++ F E Y A+ D PGA LI K G+ VA+AS++ R +++
Sbjct: 67 DYELPCKVDEFNSEFYPLFSAQMDKIKSLPGANRLIRHLKCHGVPVALASNSSRANIESK 126
Query: 200 LAAAGLPLSLFDAIVSADAFENLKPAPDIFLAASRILNVPPSECIVIEDXXXXXXXXXXX 259
++ F IV +D KP+PDIFL A++ L P++C+VIED
Sbjct: 127 ISYHEGWKECFSVIVGSDEVSKGKPSPDIFLEAAKRLKKDPADCLVIEDSVPGVMAGKAA 186
Query: 260 QMRCIAV 266
+ IAV
Sbjct: 187 GTKVIAV 193
>AT3G48420.1 | Symbols: | Haloacid dehalogenase-like hydrolase
(HAD) superfamily protein | chr3:17929743-17931551
FORWARD LENGTH=319
Length = 319
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 99/232 (42%), Gaps = 35/232 (15%)
Query: 81 SAVLFDMDGVLCNSEEPSRRAGV-DVFAEIGVQVT--VDDFVPFMGTGEANFLGGVASVK 137
SA+LFD DGVL ++E+ R D F E + VT VD + + G GG +
Sbjct: 77 SALLFDCDGVLVDTEKDGHRISFNDTFKERDLNVTWDVDLYGELLKIG-----GGKERMT 131
Query: 138 GV--------KGFDPEAAKKRF-----------FEIYLEKYAKPDSGIGFPGALELISQC 178
K EA +K F F + +EK P PG +L+ Q
Sbjct: 132 AYFNKVGWPEKAPKDEAERKEFIAGLHKQKTELFMVLIEKKLLPLR----PGVAKLVDQA 187
Query: 179 KSKGLKVAVASSADRIKVDANLAAA-GLPLSLFDAIVSADAFENLKPAPDIFLAASRILN 237
+ G+KVAV S+++ V A ++ G + I + D KP P I+ A+ L
Sbjct: 188 LTNGVKVAVCSTSNEKAVSAIVSCLLGPERAEKIKIFAGDVVPKKKPDPAIYNLAAETLG 247
Query: 238 VPPSECIVIEDXXXXXXXXXXXQMRCIAVRTTLS-DEALEPAGPTFIRDDIG 288
V PS+C+V+ED M CI ++ + DE E A F D IG
Sbjct: 248 VDPSKCVVVEDSAIGLAAAKAAGMTCIVTKSGYTADEDFENADAVF--DCIG 297
>AT2G38740.1 | Symbols: | Haloacid dehalogenase-like hydrolase
(HAD) superfamily protein | chr2:16194639-16195995
REVERSE LENGTH=244
Length = 244
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 95/225 (42%), Gaps = 17/225 (7%)
Query: 80 VSAVLFDMDGVLCNSEEPSRRAGVDVFAEIGVQ--VTVDD--FVPFMG---TGEANFLGG 132
+ A+LFD+DG LC+S+ A ++ EIG V +D+ FV + E L
Sbjct: 22 LEAILFDVDGTLCDSDPIHLIAFQELLQEIGFNNGVPIDEKFFVENIAGKHNSEIALLLF 81
Query: 133 VASV-KGVKGFDPEAAKKRFFEIYLEKYAKPDSGIGFPGALELISQCKSKGLKVAVASSA 191
V +G+K D + A R +I EK D G ++L + +GLK A ++A
Sbjct: 82 PDDVSRGLKFCDEKEALYR--KIVAEKIKPLD------GLIKLTKWIEDRGLKRAAVTNA 133
Query: 192 DRIKVDANLAAAGLPLSLFDAIVSADAFENLKPAPDIFLAASRILNVPPSECIVIEDXXX 251
+ + ++ GL F A++ E KP P +L A +LNV +V ED
Sbjct: 134 PKENAELMISKLGL-TDFFQAVILGSECEFPKPHPGPYLKALEVLNVSKEHTLVFEDSIS 192
Query: 252 XXXXXXXXQMRCIAVRTTLSDEALEPAGPTFIRDDIGSVSLDEIL 296
M I + T L A P F+ ++ L +L
Sbjct: 193 GIKAGVAAGMPVIGLTTGNPASLLMQAKPAFLIENYADPKLWAVL 237
>AT3G14860.1 | Symbols: | NHL domain-containing protein |
chr3:4998591-5000894 REVERSE LENGTH=492
Length = 492
Score = 50.8 bits (120), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 70/146 (47%), Gaps = 16/146 (10%)
Query: 786 EIYVADSESSSIRAVD---LKTGGSRLLAGGDPVFSDNLFKFGDQDGIGSEVLLQHPLGV 842
E+Y D +S+I + + RL+AG F K G DG SE HP GV
Sbjct: 102 ELYAVDELNSNIMKITPPLSQYSRGRLVAGS---FQG---KTGHADGKPSEARFNHPRGV 155
Query: 843 LCGKDGEIYITDSYNHKIKKFDPTSKRVSTIAGTGK---AGFRDGTAVTAQLSEPSGIIE 899
G +Y+ D+ N I+K + V+TIAG GK AG+RDG + A+ S ++
Sbjct: 156 TMDDKGNVYVADTLNLAIRKIGDSG--VTTIAG-GKSNIAGYRDGPSEDAKFSNDFDVVY 212
Query: 900 GN-SGRLFIADTNNSIIRYLDLNTDE 924
+ L + D N+ +R + L+ ++
Sbjct: 213 VRPTCSLLVIDRGNAALRQISLSEED 238
>AT3G14860.2 | Symbols: | NHL domain-containing protein |
chr3:4998591-5000894 REVERSE LENGTH=493
Length = 493
Score = 50.8 bits (120), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 70/146 (47%), Gaps = 16/146 (10%)
Query: 786 EIYVADSESSSIRAVD---LKTGGSRLLAGGDPVFSDNLFKFGDQDGIGSEVLLQHPLGV 842
E+Y D +S+I + + RL+AG F K G DG SE HP GV
Sbjct: 102 ELYAVDELNSNIMKITPPLSQYSRGRLVAGS---FQG---KTGHADGKPSEARFNHPRGV 155
Query: 843 LCGKDGEIYITDSYNHKIKKFDPTSKRVSTIAGTGK---AGFRDGTAVTAQLSEPSGIIE 899
G +Y+ D+ N I+K + V+TIAG GK AG+RDG + A+ S ++
Sbjct: 156 TMDDKGNVYVADTLNLAIRKIGDSG--VTTIAG-GKSNIAGYRDGPSEDAKFSNDFDVVY 212
Query: 900 GN-SGRLFIADTNNSIIRYLDLNTDE 924
+ L + D N+ +R + L+ ++
Sbjct: 213 VRPTCSLLVIDRGNAALRQISLSEED 238