Miyakogusa Predicted Gene

Lj1g3v4764980.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4764980.1 Non Chatacterized Hit- tr|I1NB13|I1NB13_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,90.14,0,no
description,NULL; A Receptor for Ubiquitination Targets,F-box domain,
cyclin-like; Leucine-rich r,CUFF.33309.1
         (585 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G62980.1 | Symbols: TIR1 | F-box/RNI-like superfamily protein...   974   0.0  
AT4G03190.1 | Symbols: GRH1, ATGRH1, AFB1 | GRR1-like protein 1 ...   804   0.0  
AT1G12820.1 | Symbols: AFB3 | auxin signaling F-box 3 | chr1:436...   708   0.0  
AT3G26810.1 | Symbols: AFB2 | auxin signaling F-box 2 | chr3:986...   693   0.0  
AT5G49980.1 | Symbols: AFB5 | auxin F-box protein 5 | chr5:20334...   558   e-159
AT4G24390.1 | Symbols:  | RNI-like superfamily protein | chr4:12...   547   e-156
AT4G24390.2 | Symbols:  | RNI-like superfamily protein | chr4:12...   547   e-156
AT2G39940.1 | Symbols: COI1 | RNI-like superfamily protein | chr...   310   3e-84
AT4G15475.1 | Symbols:  | F-box/RNI-like superfamily protein | c...    83   6e-16
AT1G47056.1 | Symbols: VFB1 | VIER F-box proteine 1 | chr1:17276...    81   2e-15
AT5G67250.1 | Symbols: SKIP2, VFB4 | SKP1/ASK1-interacting prote...    71   2e-12
AT2G36370.1 | Symbols:  | ubiquitin-protein ligases | chr2:15247...    61   2e-09
AT5G25350.1 | Symbols: EBF2 | EIN3-binding F box protein 2 | chr...    58   1e-08
AT5G23340.1 | Symbols:  | RNI-like superfamily protein | chr5:78...    56   8e-08
AT2G25490.1 | Symbols: EBF1, FBL6 | EIN3-binding F box protein 1...    53   5e-07
AT1G21410.1 | Symbols: SKP2A | F-box/RNI-like superfamily protei...    50   6e-06

>AT3G62980.1 | Symbols: TIR1 | F-box/RNI-like superfamily protein |
           chr3:23273479-23276181 REVERSE LENGTH=594
          Length = 594

 Score =  974 bits (2519), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 468/583 (80%), Positives = 536/583 (91%), Gaps = 1/583 (0%)

Query: 2   KRMVCSFPEEVLEHVFSFIQVDTDRNAISLVCKSWYEIERWCRRKVFVGNCYAVSPMIVI 61
           KR+  SFPEEVLEHVFSFIQ+D DRN++SLVCKSWYEIERWCRRKVF+GNCYAVSP  VI
Sbjct: 3   KRIALSFPEEVLEHVFSFIQLDKDRNSVSLVCKSWYEIERWCRRKVFIGNCYAVSPATVI 62

Query: 62  KRFPEVRSIALKGKPHFADFNLVPEGWGGYVCTWIAAMSRAFPWLEEIRLKRMVISDESL 121
           +RFP+VRS+ LKGKPHFADFNLVP+GWGGYV  WI AMS ++ WLEEIRLKRMV++D+ L
Sbjct: 63  RRFPKVRSVELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTWLEEIRLKRMVVTDDCL 122

Query: 122 ELIAKSFKNFKVLVLTSCEGFTTDGLAAIAANCRNLRELDLQESEVEDLSGHWLSHFPDS 181
           ELIAKSFKNFKVLVL+SCEGF+TDGLAAIAA CRNL+ELDL+ES+V+D+SGHWLSHFPD+
Sbjct: 123 ELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDT 182

Query: 182 YTSLVSLNISCLSNEVSLSALERLLGRCPNMKTLRLNRAVPLDRLPNLLRQCPQLVELGT 241
           YTSLVSLNISCL++EVS SALERL+ RCPN+K+L+LNRAVPL++L  LL++ PQL ELGT
Sbjct: 183 YTSLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLEKLATLLQRAPQLEELGT 242

Query: 242 GVYSAEMRPDVFSNLAAAFSGCKQLKSLSGFWDVLPSYLPAVYPVCSGLTSLNLSYATVQ 301
           G Y+AE+RPDV+S L+ A SGCK+L+ LSGFWD +P+YLPAVY VCS LT+LNLSYATVQ
Sbjct: 243 GGYTAEVRPDVYSGLSVALSGCKELRCLSGFWDAVPAYLPAVYSVCSRLTTLNLSYATVQ 302

Query: 302 SSDLVKLISQCPSLQRLWVLDFIEDAGLDVLAASCKDLRELRVFPSDPFGFEPNVALTER 361
           S DLVKL+ QCP LQRLWVLD+IEDAGL+VLA++CKDLRELRVFPS+PF  EPNVALTE+
Sbjct: 303 SYDLVKLLCQCPKLQRLWVLDYIEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQ 362

Query: 362 GLVSVSEGCPKLQSVLYFCRQMSNAALHTIARNRPNFTCFRLCIIEPQAPDYLTLQPLDS 421
           GLVSVS GCPKL+SVLYFCRQM+NAAL TIARNRPN T FRLCIIEP+APDYLTL+PLD 
Sbjct: 363 GLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDI 422

Query: 422 GFGAIVEHCKGLQRLSLSGLLTDRVFEYIGTYGKKLEMLSLAFAGDSDLGLHHVLSGCDN 481
           GFGAIVEHCK L+RLSLSGLLTD+VFEYIGTY KK+EMLS+AFAGDSDLG+HHVLSGCD+
Sbjct: 423 GFGAIVEHCKDLRRLSLSGLLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDS 482

Query: 482 LKKLEIRDCPFGDKALLANAAKLETMRSLWMSSCSVSYGACKLLGLKMPKLNVEVIDERG 541
           L+KLEIRDCPFGDKALLANA+KLETMRSLWMSSCSVS+GACKLLG KMPKLNVEVIDERG
Sbjct: 483 LRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSVSFGACKLLGQKMPKLNVEVIDERG 542

Query: 542 PPDSRPDSCPVEKLYIYRTIAGPRMDMPGFVYRMEDDDSALRL 584
            PDSRP+SCPVE+++IYRT+AGPR DMPGFV+ M D DS +R 
Sbjct: 543 APDSRPESCPVERVFIYRTVAGPRFDMPGFVWNM-DQDSTMRF 584


>AT4G03190.1 | Symbols: GRH1, ATGRH1, AFB1 | GRR1-like protein 1 |
           chr4:1405108-1407057 REVERSE LENGTH=585
          Length = 585

 Score =  804 bits (2077), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 388/575 (67%), Positives = 470/575 (81%), Gaps = 1/575 (0%)

Query: 4   MVCSFPEEVLEHVFSFIQVDTDRNAISLVCKSWYEIERWCRRKVFVGNCYAVSPMIVIKR 63
           M   FP +VLEH+ SFI  + DRN++SLVCKSW+E ER  R++VFVGNCYAVSP  V +R
Sbjct: 1   MGLRFPPKVLEHILSFIDSNEDRNSVSLVCKSWFETERKTRKRVFVGNCYAVSPAAVTRR 60

Query: 64  FPEVRSIALKGKPHFADFNLVPEGWGGYVCTWIAAMSRAFPWLEEIRLKRMVISDESLEL 123
           FPE+RS+ LKGKPHFAD+NLVP+GWGGY   WI AM+     LEEIR+KRMV++DE LE 
Sbjct: 61  FPEMRSLTLKGKPHFADYNLVPDGWGGYAWPWIEAMAAKSSSLEEIRMKRMVVTDECLEK 120

Query: 124 IAKSFKNFKVLVLTSCEGFTTDGLAAIAANCRNLRELDLQESEVEDLSGHWLSHFPDSYT 183
           IA SFK+FKVLVLTSCEGF+TDG+AAIAA CRNLR L+L+E  VEDL G WLS+FP+S T
Sbjct: 121 IAASFKDFKVLVLTSCEGFSTDGIAAIAATCRNLRVLELRECIVEDLGGDWLSYFPESST 180

Query: 184 SLVSLNISCLSNEVSLSALERLLGRCPNMKTLRLNRAVPLDRLPNLLRQCPQLVELGTGV 243
           SLVSL+ SCL +EV +S LERL+ R PN+K+L+LN AV LD L +LLR  PQL ELGTG 
Sbjct: 181 SLVSLDFSCLDSEVKISDLERLVSRSPNLKSLKLNPAVTLDGLVSLLRCAPQLTELGTGS 240

Query: 244 YSAEMRPDVFSNLAAAFSGCKQLKSLSGFWDVLPSYLPAVYPVCSGLTSLNLSYATVQSS 303
           ++A+++P+ FS L+ AFS CKQL+SLSG WDVLP YLPA+Y VC GLTSLNLSYATV+  
Sbjct: 241 FAAQLKPEAFSKLSEAFSNCKQLQSLSGLWDVLPEYLPALYSVCPGLTSLNLSYATVRMP 300

Query: 304 DLVKLISQCPSLQRLWVLDFIEDAGLDVLAASCKDLRELRVFPSDPFGFEPNVALTERGL 363
           DLV+L+ +C  LQ+LWV+D IED GL+ +A+ CK+LRELRVFPS+P     N+ LTE+GL
Sbjct: 301 DLVELLRRCSKLQKLWVMDLIEDKGLEAVASYCKELRELRVFPSEPDLDATNIPLTEQGL 360

Query: 364 VSVSEGCPKLQSVLYFCRQMSNAALHTIARNRPNFTCFRLCIIEPQAPDYLTLQPLDSGF 423
           V VS+GC KL+SVLYFC Q +NAAL TIAR RPN  CFRLC+IEP APDY T +PLD GF
Sbjct: 361 VFVSKGCRKLESVLYFCVQFTNAALFTIARKRPNLKCFRLCVIEPFAPDYKTNEPLDKGF 420

Query: 424 GAIVEHCKGLQRLSLSGLLTDRVFEYIGTYGKKLEMLSLAFAGDSDLGLHHVLSGCDNLK 483
            AI E C+ L+RLS+SGLL+D+ F+YIG + KK+ MLS+AFAGDSDL LHH+LSGC++LK
Sbjct: 421 KAIAEGCRDLRRLSVSGLLSDKAFKYIGKHAKKVRMLSIAFAGDSDLMLHHLLSGCESLK 480

Query: 484 KLEIRDCPFGDKALLANAAKLETMRSLWMSSCSVSYGACKLLGLKMPKLNVEVIDERGPP 543
           KLEIRDCPFGD ALL +AAKLETMRSLWMSSC VS+GACKLL  KMP+LNVEVIDE  PP
Sbjct: 481 KLEIRDCPFGDTALLEHAAKLETMRSLWMSSCFVSFGACKLLSQKMPRLNVEVIDEH-PP 539

Query: 544 DSRPDSCPVEKLYIYRTIAGPRMDMPGFVYRMEDD 578
           +SRP+S PVE++YIYRT+AGPRMD P FV+ +  +
Sbjct: 540 ESRPESSPVERIYIYRTVAGPRMDTPEFVWTIHKN 574


>AT1G12820.1 | Symbols: AFB3 | auxin signaling F-box 3 |
           chr1:4368879-4370780 REVERSE LENGTH=577
          Length = 577

 Score =  708 bits (1828), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 344/571 (60%), Positives = 439/571 (76%), Gaps = 6/571 (1%)

Query: 8   FPEEVLEHVFSFIQVDTDRNAISLVCKSWYEIERWCRRKVFVGNCYAVSPMIVIKRFPEV 67
           FP+EV+EHVF F+    DRN+ISLVCKSW++IER+ R++VF+GNCYA++P  +I+RFP +
Sbjct: 4   FPDEVIEHVFDFVASHKDRNSISLVCKSWHKIERFSRKEVFIGNCYAINPERLIRRFPCL 63

Query: 68  RSIALKGKPHFADFNLVPEGWGGYVCTWIAAMSRAFPWLEEIRLKRMVISDESLELIAKS 127
           +S+ LKGKPHFADFNLVP  WGG+V  WI A++R+   LEE+RLKRMV++DESL+L+++S
Sbjct: 64  KSLTLKGKPHFADFNLVPHEWGGFVHPWIEALARSRVGLEELRLKRMVVTDESLDLLSRS 123

Query: 128 FKNFKVLVLTSCEGFTTDGLAAIAANCRNLRELDLQESEVEDLSGHWLSHFPDSYTSLVS 187
           F NFK LVL SCEGFTTDGLA+IAANCR+LRELDLQE+E++D  G WL+ FPDS T+L+S
Sbjct: 124 FANFKSLVLVSCEGFTTDGLASIAANCRHLRELDLQENEIDDHRGQWLNCFPDSCTTLMS 183

Query: 188 LNISCLSNEVSLSALERLLGRCPNMKTLRLNRAVPLDRLPNLLRQCPQLVELGTGVYSAE 247
           LN +CL  E +++ALERL+ R PN+K+L+LNRAVPLD L  L+   PQLV+LG G Y  E
Sbjct: 184 LNFACLKGETNVAALERLVARSPNLKSLKLNRAVPLDALARLMSCAPQLVDLGVGSYENE 243

Query: 248 MRPDVFSNLAAAFSGCKQLKSLSGFWDVLPSYLPAVYPVCSGLTSLNLSYAT-VQSSDLV 306
             P+ F+ L  A      L+SLSGF +V P  LPA YP+C  L SLNLSYA  +Q + L+
Sbjct: 244 PDPESFAKLMTAIKKYTSLRSLSGFLEVAPLCLPAFYPICQNLISLNLSYAAEIQGNHLI 303

Query: 307 KLISQCPSLQRLWVLDFIEDAGLDVLAASCKDLRELRVFPSDPFGFEPNVA-LTERGLVS 365
           KLI  C  LQRLW+LD I D GL V+AA+CK+L+ELRVFPSD  G E N A +TE GLV+
Sbjct: 304 KLIQLCKRLQRLWILDSIGDKGLAVVAATCKELQELRVFPSDVHGEEDNNASVTEVGLVA 363

Query: 366 VSEGCPKLQSVLYFCRQMSNAALHTIARNRPNFTCFRLCIIEPQAPDYLTLQPLDSGFGA 425
           +S GCPKL S+LYFC+QM+NAAL  +A+N PNF  FRLCI+EP  PD++T Q LD GFGA
Sbjct: 364 ISAGCPKLHSILYFCKQMTNAALIAVAKNCPNFIRFRLCILEPHKPDHITFQSLDEGFGA 423

Query: 426 IVEHCKGLQRLSLSGLLTDRVFEYIGTYGKKLEMLSLAFAGDSDLGLHHVLSGCDNLKKL 485
           IV+ CKGL+RLS+SGLLTD+VF YIG Y ++LEMLS+AFAGD+D G+ +VL+GC  ++KL
Sbjct: 424 IVQACKGLRRLSVSGLLTDQVFLYIGMYAEQLEMLSIAFAGDTDKGMLYVLNGCKKMRKL 483

Query: 486 EIRDCPFGDKALLANAAKLETMRSLWMSSCSVSYGACKLLGLKMPKLNVEVIDE---RGP 542
           EIRD PFG+ ALLA+  + ETMRSLWMSSC V+ G CK L    P+LNVE+I+E    G 
Sbjct: 484 EIRDSPFGNAALLADVGRYETMRSLWMSSCEVTLGGCKRLAQNSPRLNVEIINENENNGM 543

Query: 543 PDSRPDSC-PVEKLYIYRTIAGPRMDMPGFV 572
             +  D    V+KLY+YRT+ G R D P +V
Sbjct: 544 EQNEEDEREKVDKLYLYRTVVGTRKDAPPYV 574


>AT3G26810.1 | Symbols: AFB2 | auxin signaling F-box 2 |
           chr3:9868342-9870464 FORWARD LENGTH=575
          Length = 575

 Score =  693 bits (1789), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 346/571 (60%), Positives = 436/571 (76%), Gaps = 6/571 (1%)

Query: 8   FPEEVLEHVFSFIQVDTDRNAISLVCKSWYEIERWCRRKVFVGNCYAVSPMIVIKRFPEV 67
           FP+EV+EHVF F+    DRNAISLVCKSWY+IER+ R+KVF+GNCYA++P  +++RFP +
Sbjct: 4   FPDEVIEHVFDFVTSHKDRNAISLVCKSWYKIERYSRQKVFIGNCYAINPERLLRRFPCL 63

Query: 68  RSIALKGKPHFADFNLVPEGWGGYVCTWIAAMSRAFPWLEEIRLKRMVISDESLELIAKS 127
           +S+ LKGKPHFADFNLVP  WGG+V  WI A++R+   LEE+RLKRMV++DESLEL+++S
Sbjct: 64  KSLTLKGKPHFADFNLVPHEWGGFVLPWIEALARSRVGLEELRLKRMVVTDESLELLSRS 123

Query: 128 FKNFKVLVLTSCEGFTTDGLAAIAANCRNLRELDLQESEVEDLSGHWLSHFPDSYTSLVS 187
           F NFK LVL SCEGFTTDGLA+IAANCR+LR+LDLQE+E++D  G WLS FPD+ T+LV+
Sbjct: 124 FVNFKSLVLVSCEGFTTDGLASIAANCRHLRDLDLQENEIDDHRGQWLSCFPDTCTTLVT 183

Query: 188 LNISCLSNEVSLSALERLLGRCPNMKTLRLNRAVPLDRLPNLLRQCPQLVELGTGVYSAE 247
           LN +CL  E +L ALERL+ R PN+K+L+LNRAVPLD L  L+   PQ+V+LG G Y  +
Sbjct: 184 LNFACLEGETNLVALERLVARSPNLKSLKLNRAVPLDALARLMACAPQIVDLGVGSYEND 243

Query: 248 MRPDVFSNLAAAFSGCKQLKSLSGFWDVLPSYLPAVYPVCSGLTSLNLSYAT-VQSSDLV 306
              + +  L A    C  L+SLSGF +  P  L A +P+C  LTSLNLSYA  +  S L+
Sbjct: 244 PDSESYLKLMAVIKKCTSLRSLSGFLEAAPHCLSAFHPICHNLTSLNLSYAAEIHGSHLI 303

Query: 307 KLISQCPSLQRLWVLDFIEDAGLDVLAASCKDLRELRVFPSDPFGFEPNVALTERGLVSV 366
           KLI  C  LQRLW+LD I D GL+V+A++CK+L+ELRVFPSD  G   N A+TE GLV++
Sbjct: 304 KLIQHCKKLQRLWILDSIGDKGLEVVASTCKELQELRVFPSDLLG-GGNTAVTEEGLVAI 362

Query: 367 SEGCPKLQSVLYFCRQMSNAALHTIARNRPNFTCFRLCIIEPQAPDYLTLQPLDSGFGAI 426
           S GCPKL S+LYFC+QM+NAAL T+A+N PNF  FRLCI+EP  PD++T QPLD GFGAI
Sbjct: 363 SAGCPKLHSILYFCQQMTNAALVTVAKNCPNFIRFRLCILEPNKPDHVTSQPLDEGFGAI 422

Query: 427 VEHCKGLQRLSLSGLLTDRVFEYIGTYGKKLEMLSLAFAGDSDLGLHHVLSGCDNLKKLE 486
           V+ CK L+RLSLSGLLTD+VF YIG Y  +LEMLS+AFAGD+D G+ +VL+GC  +KKLE
Sbjct: 423 VKACKSLRRLSLSGLLTDQVFLYIGMYANQLEMLSIAFAGDTDKGMLYVLNGCKKMKKLE 482

Query: 487 IRDCPFGDKALLANAAKLETMRSLWMSSCSVSYGACKLLGLKMPKLNVEVIDE----RGP 542
           IRD PFGD ALLA+ +K ETMRSLWMSSC V+   CK L  K P LNVE+I+E    R  
Sbjct: 483 IRDSPFGDTALLADVSKYETMRSLWMSSCEVTLSGCKRLAEKAPWLNVEIINENDNNRME 542

Query: 543 PDSRPDSCPVEKLYIYRTIAGPRMDMPGFVY 573
            +       V+KLY+YRT+ G RMD P FV+
Sbjct: 543 ENGHEGRQKVDKLYLYRTVVGTRMDAPPFVW 573


>AT5G49980.1 | Symbols: AFB5 | auxin F-box protein 5 |
           chr5:20334420-20336531 REVERSE LENGTH=619
          Length = 619

 Score =  558 bits (1437), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 285/565 (50%), Positives = 374/565 (66%), Gaps = 6/565 (1%)

Query: 10  EEVLEHVFSFIQVDTDRNAISLVCKSWYEIERWCRRKVFVGNCYAVSPMIVIKRFPEVRS 69
           E VLE+V  F+    DRNA SLVCKSW+ +E   R +VF+GNCYA+SP  + +RF  VRS
Sbjct: 56  ENVLENVLQFLDSRCDRNAASLVCKSWWRVEALTRSEVFIGNCYALSPARLTQRFKRVRS 115

Query: 70  IALKGKPHFADFNLVPEGWGGYVCTWIAAMSRAFPWLEEIRLKRMVISDESLELIAKSFK 129
           + LKGKP FADFNL+P  WG     W++ M++A+P LE++ LKRM ++D+ L L+A SF 
Sbjct: 116 LVLKGKPRFADFNLMPPDWGANFAPWVSTMAQAYPCLEKVDLKRMFVTDDDLALLADSFP 175

Query: 130 NFKVLVLTSCEGFTTDGLAAIAANCRNLRELDLQESEVEDLSGHWLSHFPDSYTSLVSLN 189
            FK L+L  CEGF T G++ +A  CR L+ LDL ESEV D    W+S FP+  T L SL 
Sbjct: 176 GFKELILVCCEGFGTSGISIVANKCRKLKVLDLIESEVTDDEVDWISCFPEDVTCLESLA 235

Query: 190 ISCLSNEVSLSALERLLGRCPNMKTLRLNRAVPLDRLPNLLRQCPQLVELGTGVYSAEMR 249
             C+   ++  ALE L+ R P +K LRLNR V L  L  LL   PQL  LGTG +S +  
Sbjct: 236 FDCVEAPINFKALEGLVARSPFLKKLRLNRFVSLVELHRLLLGAPQLTSLGTGSFSHDEE 295

Query: 250 P--DVFSNLAAAFSGCKQLKSLSGFWDVLPSYLPAVYPVCSGLTSLNLSYATVQSSDLVK 307
           P  +   + AAAF  CK +  LSGF +++P YLPA++PVC+ LTSLN SYA +       
Sbjct: 296 PQSEQEPDYAAAFRACKSVVCLSGFRELMPEYLPAIFPVCANLTSLNFSYANISPDMFKP 355

Query: 308 LISQCPSLQRLWVLDFIEDAGLDVLAASCKDLRELRVFPSDPFGFEPNVALTERGLVSVS 367
           +I  C  LQ  W LD I D GL  +AA+CK+LRELR+FP DP   +    ++E GL ++S
Sbjct: 356 IILNCHKLQVFWALDSICDEGLQAVAATCKELRELRIFPFDPRE-DSEGPVSELGLQAIS 414

Query: 368 EGCPKLQSVLYFCRQMSNAALHTIARNRPNFTCFRLCIIEPQAPDYLTLQPLDSGFGAIV 427
           EGC KL+S+LYFC++M+NAA+  ++ N P  T FRLCI+    PD++T +P+D GFGAIV
Sbjct: 415 EGCRKLESILYFCQRMTNAAVIAMSENCPELTVFRLCIMGRHRPDHVTGKPMDEGFGAIV 474

Query: 428 EHCKGLQRLSLSGLLTDRVFEYIGTYGKKLEMLSLAFAGDSDLGLHHVLSGCDNLKKLEI 487
           ++CK L RL++SGLLTD+ F Y+G YGK +  LS+AFAGDSD+ L HVL GC  L+KLEI
Sbjct: 475 KNCKKLTRLAVSGLLTDQAFRYMGEYGKLVRTLSVAFAGDSDMALRHVLEGCPRLQKLEI 534

Query: 488 RDCPFGDKALLANAAKLETMRSLWMSSCSVSYGACKLLGLKMPKLNVEVIDERGPPDSRP 547
           RD PFGD AL +   +   MR +WMS+CS+S G CK +   MP L VEVI      D+R 
Sbjct: 535 RDSPFGDVALRSGMHRYYNMRFVWMSACSLSKGCCKDIARAMPNLVVEVIGSDDDDDNRD 594

Query: 548 DSCPVEKLYIYRTIAGPRMDMPGFV 572
               VE LY+YR++ GPR D P FV
Sbjct: 595 ---YVETLYMYRSLDGPRNDAPKFV 616


>AT4G24390.1 | Symbols:  | RNI-like superfamily protein |
           chr4:12613909-12615966 REVERSE LENGTH=623
          Length = 623

 Score =  547 bits (1410), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 277/570 (48%), Positives = 369/570 (64%), Gaps = 12/570 (2%)

Query: 10  EEVLEHVFSFIQVDTDRNAISLVCKSWYEIERWCRRKVFVGNCYAVSPMIVIKRFPEVRS 69
           E VLE+V  F+    DRNA+SLVC+SWY +E   R +VF+GNCY++SP  +I RF  VRS
Sbjct: 56  ENVLENVLQFLTSRCDRNAVSLVCRSWYRVEAQTRLEVFIGNCYSLSPARLIHRFKRVRS 115

Query: 70  IALKGKPHFADFNLVPEGWGGYVCTWIAAMSRAFPWLEEIRLKRMVISDESLELIAKSFK 129
           + LKGKP FADFNL+P  WG     W+AA ++A+PWLE++ LKRM ++D+ L L+A+SF 
Sbjct: 116 LVLKGKPRFADFNLMPPNWGAQFSPWVAATAKAYPWLEKVHLKRMFVTDDDLALLAESFP 175

Query: 130 NFKVLVLTSCEGFTTDGLAAIAANCRNLRELDLQESEVEDLSGHWLSHFPDSYTSLVSLN 189
            FK L L  CEGF T G+A +A  CR L+ LDL ESEV D    W+S FP+  T L SL+
Sbjct: 176 GFKELTLVCCEGFGTSGIAIVANKCRQLKVLDLMESEVTDDELDWISCFPEGETHLESLS 235

Query: 190 ISCLSNEVSLSALERLLGRCPNMKTLRLNRAVPLDRLPNLLRQCPQLVELGTGVYS---- 245
             C+ + ++  ALE L+ R P +K LR NR V L+ L  L+ + PQL  LGTG +S    
Sbjct: 236 FDCVESPINFKALEELVVRSPFLKKLRTNRFVSLEELHRLMVRAPQLTSLGTGSFSPDNV 295

Query: 246 --AEMRPDVFSNLAAAFSGCKQLKSLSGFWDVLPSYLPAVYPVCSGLTSLNLSYATVQSS 303
              E +PD     AAAF  CK +  LSGF +  P YL A+  VC+ LTSLN SYA +   
Sbjct: 296 PQGEQQPD----YAAAFRACKSIVCLSGFREFRPEYLLAISSVCANLTSLNFSYANISPH 351

Query: 304 DLVKLISQCPSLQRLWVLDFIEDAGLDVLAASCKDLRELRVFPSDPFGFEPNVALTERGL 363
            L  +IS C +++  W LD I D GL  +AA+CK+LRELR+FP DP   +    ++  GL
Sbjct: 352 MLKPIISNCHNIRVFWALDSIRDEGLQAVAATCKELRELRIFPFDPRE-DSEGPVSGVGL 410

Query: 364 VSVSEGCPKLQSVLYFCRQMSNAALHTIARNRPNFTCFRLCIIEPQAPDYLTLQPLDSGF 423
            ++SEGC KL+S+LYFC+ M+N A+  ++ N P  T FRLCI+    PD++T +P+D GF
Sbjct: 411 QAISEGCRKLESILYFCQNMTNGAVTAMSENCPQLTVFRLCIMGRHRPDHVTGKPMDDGF 470

Query: 424 GAIVEHCKGLQRLSLSGLLTDRVFEYIGTYGKKLEMLSLAFAGDSDLGLHHVLSGCDNLK 483
           GAIV++CK L RL++SGLLTD  F YIG YGK +  LS+AFAG+SD  L +VL GC  L+
Sbjct: 471 GAIVKNCKKLTRLAVSGLLTDEAFSYIGEYGKLIRTLSVAFAGNSDKALRYVLEGCPKLQ 530

Query: 484 KLEIRDCPFGDKALLANAAKLETMRSLWMSSCSVSYGACKLLGLKMPKLNVEVIDERGPP 543
           KLEIRD PFGD  L +   +   MR +W+SSC +S G C+ +   +P + VEV    G  
Sbjct: 531 KLEIRDSPFGDVGLRSGMHRYSNMRFVWLSSCLISRGGCRGVSHALPNVVVEVFGADGDD 590

Query: 544 DSRPDSCP-VEKLYIYRTIAGPRMDMPGFV 572
           D    +   VE LY+YR++ GPR D P FV
Sbjct: 591 DEDTVTGDYVETLYLYRSLDGPRKDAPKFV 620


>AT4G24390.2 | Symbols:  | RNI-like superfamily protein |
           chr4:12613909-12615966 REVERSE LENGTH=623
          Length = 623

 Score =  547 bits (1410), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 277/570 (48%), Positives = 369/570 (64%), Gaps = 12/570 (2%)

Query: 10  EEVLEHVFSFIQVDTDRNAISLVCKSWYEIERWCRRKVFVGNCYAVSPMIVIKRFPEVRS 69
           E VLE+V  F+    DRNA+SLVC+SWY +E   R +VF+GNCY++SP  +I RF  VRS
Sbjct: 56  ENVLENVLQFLTSRCDRNAVSLVCRSWYRVEAQTRLEVFIGNCYSLSPARLIHRFKRVRS 115

Query: 70  IALKGKPHFADFNLVPEGWGGYVCTWIAAMSRAFPWLEEIRLKRMVISDESLELIAKSFK 129
           + LKGKP FADFNL+P  WG     W+AA ++A+PWLE++ LKRM ++D+ L L+A+SF 
Sbjct: 116 LVLKGKPRFADFNLMPPNWGAQFSPWVAATAKAYPWLEKVHLKRMFVTDDDLALLAESFP 175

Query: 130 NFKVLVLTSCEGFTTDGLAAIAANCRNLRELDLQESEVEDLSGHWLSHFPDSYTSLVSLN 189
            FK L L  CEGF T G+A +A  CR L+ LDL ESEV D    W+S FP+  T L SL+
Sbjct: 176 GFKELTLVCCEGFGTSGIAIVANKCRQLKVLDLMESEVTDDELDWISCFPEGETHLESLS 235

Query: 190 ISCLSNEVSLSALERLLGRCPNMKTLRLNRAVPLDRLPNLLRQCPQLVELGTGVYS---- 245
             C+ + ++  ALE L+ R P +K LR NR V L+ L  L+ + PQL  LGTG +S    
Sbjct: 236 FDCVESPINFKALEELVVRSPFLKKLRTNRFVSLEELHRLMVRAPQLTSLGTGSFSPDNV 295

Query: 246 --AEMRPDVFSNLAAAFSGCKQLKSLSGFWDVLPSYLPAVYPVCSGLTSLNLSYATVQSS 303
              E +PD     AAAF  CK +  LSGF +  P YL A+  VC+ LTSLN SYA +   
Sbjct: 296 PQGEQQPD----YAAAFRACKSIVCLSGFREFRPEYLLAISSVCANLTSLNFSYANISPH 351

Query: 304 DLVKLISQCPSLQRLWVLDFIEDAGLDVLAASCKDLRELRVFPSDPFGFEPNVALTERGL 363
            L  +IS C +++  W LD I D GL  +AA+CK+LRELR+FP DP   +    ++  GL
Sbjct: 352 MLKPIISNCHNIRVFWALDSIRDEGLQAVAATCKELRELRIFPFDPRE-DSEGPVSGVGL 410

Query: 364 VSVSEGCPKLQSVLYFCRQMSNAALHTIARNRPNFTCFRLCIIEPQAPDYLTLQPLDSGF 423
            ++SEGC KL+S+LYFC+ M+N A+  ++ N P  T FRLCI+    PD++T +P+D GF
Sbjct: 411 QAISEGCRKLESILYFCQNMTNGAVTAMSENCPQLTVFRLCIMGRHRPDHVTGKPMDDGF 470

Query: 424 GAIVEHCKGLQRLSLSGLLTDRVFEYIGTYGKKLEMLSLAFAGDSDLGLHHVLSGCDNLK 483
           GAIV++CK L RL++SGLLTD  F YIG YGK +  LS+AFAG+SD  L +VL GC  L+
Sbjct: 471 GAIVKNCKKLTRLAVSGLLTDEAFSYIGEYGKLIRTLSVAFAGNSDKALRYVLEGCPKLQ 530

Query: 484 KLEIRDCPFGDKALLANAAKLETMRSLWMSSCSVSYGACKLLGLKMPKLNVEVIDERGPP 543
           KLEIRD PFGD  L +   +   MR +W+SSC +S G C+ +   +P + VEV    G  
Sbjct: 531 KLEIRDSPFGDVGLRSGMHRYSNMRFVWLSSCLISRGGCRGVSHALPNVVVEVFGADGDD 590

Query: 544 DSRPDSCP-VEKLYIYRTIAGPRMDMPGFV 572
           D    +   VE LY+YR++ GPR D P FV
Sbjct: 591 DEDTVTGDYVETLYLYRSLDGPRKDAPKFV 620


>AT2G39940.1 | Symbols: COI1 | RNI-like superfamily protein |
           chr2:16672848-16675486 REVERSE LENGTH=592
          Length = 592

 Score =  310 bits (793), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 186/576 (32%), Positives = 305/576 (52%), Gaps = 21/576 (3%)

Query: 10  EEVLEHVFSFIQVDTDRNAISLVCKSWYEIERWCRRKVFVGNCYAVSPMIVIKRFPEVRS 69
           ++V+E V ++I    DR++ SLVC+ W++I+   R  V +  CY  +P  + +RFP +RS
Sbjct: 18  DDVIEQVMTYITDPKDRDSASLVCRRWFKIDSETREHVTMALCYTATPDRLSRRFPNLRS 77

Query: 70  IALKGKPHFADFNLVPEGWGGYVCTWIAAMSRAFPWLEEIRLKRMVISDESLELIAKS-F 128
           + LKGKP  A FNL+PE WGGYV  W+  +S     L+ +  +RM++SD  L+ +AK+  
Sbjct: 78  LKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQLKSVHFRRMIVSDLDLDRLAKARA 137

Query: 129 KNFKVLVLTSCEGFTTDGLAAIAANCRNLRELDLQESEVEDLSGHWLSHFPDSYTSLVSL 188
            + + L L  C GFTTDGL +I  +CR ++ L ++ES   +  G WL       TSL  L
Sbjct: 138 DDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVL 197

Query: 189 NISCLS-NEVSLSALERLLGRCPNMKTLRLNRAVPLDRLPNLLRQCPQLVELGTGVYSAE 247
           N       ++S   LE +   C ++ ++++     L+ L    +    L E   G  + +
Sbjct: 198 NFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNED 256

Query: 248 M-RPDVFSNLAAAFSGCKQLKSLSGFWDVLPSYLPAVYPVCSGLTSLNLSYATVQSSDLV 306
           +  P+ + NL      C+   S  G     P+ +P ++P  + +  L+L YA +++ D  
Sbjct: 257 IGMPEKYMNLVFPRKLCRLGLSYMG-----PNEMPILFPFAAQIRKLDLLYALLETEDHC 311

Query: 307 KLISQCPSLQRLWVLDFIEDAGLDVLAASCKDLRELRV-FPSDPFGFEPNVAL-TERGLV 364
            LI +CP+L+ L   + I D GL+VLA  CK L+ LR+   +D  G E    L ++RGL+
Sbjct: 312 TLIQKCPNLEVLETRNVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLI 371

Query: 365 SVSEGCPKLQSVLYFCRQMSNAALHTIARNRPNFTCFRLCIIEPQAPDYLTLQPLDSGFG 424
           ++++GC +L+ +  +   ++N +L +I     N   FRL +++ +  + +T  PLD+G  
Sbjct: 372 ALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDRE--ERITDLPLDNGVR 429

Query: 425 AIVEHCKGLQRLSL---SGLLTDRVFEYIGTYGKKLEMLSLAFAGDSDLGLHHVLSGCDN 481
           +++  CK L+R +     G LTD    YIG Y   +  + L + G+SD GL     GC N
Sbjct: 430 SLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPN 489

Query: 482 LKKLEIRDCPFGDKALLANAAKLETMRSLWMSSCSVSYGACKLLGLKMPKLNVEVIDERG 541
           L+KLE+R C F ++A+ A   KL ++R LW+     S     L+ +  P  N+E+I  R 
Sbjct: 490 LQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASMTGQDLMQMARPYWNIELIPSRR 549

Query: 542 PPDSRPDSCPVE-----KLYIYRTIAGPRMDMPGFV 572
            P+        E      +  Y ++AG R D P  V
Sbjct: 550 VPEVNQQGEIREMEHPAHILAYYSLAGQRTDCPTTV 585


>AT4G15475.1 | Symbols:  | F-box/RNI-like superfamily protein |
           chr4:8845927-8848701 FORWARD LENGTH=610
          Length = 610

 Score = 82.8 bits (203), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 133/593 (22%), Positives = 233/593 (39%), Gaps = 130/593 (21%)

Query: 8   FPEEVLEHVFSFIQVDTDRNAISLVCKSWYEIERWCRRKVFVGNCYAVSPMIVI--KRFP 65
            PEE++  +F  ++   +R+A SLVCK W  +ER+ R  + +G  ++    I +  +RF 
Sbjct: 11  LPEELILEIFRRLESKPNRDACSLVCKRWLSLERFSRTTLRIGASFSPDDFISLLSRRFL 70

Query: 66  EVRSI----------------------------------ALKGKPHFADFNLVPEGWGGY 91
            + SI                                   L  K H    N+        
Sbjct: 71  YITSIHVDERISVSLPSLSPSPKRKRGRDSSSPSSSKRKKLTDKTHSGAENVESSSLTD- 129

Query: 92  VCTWIAAMSRAFPWLEEIRLKRM-VISDESLELIAKSFKNFKVLVLTSCEGFTTD-GLAA 149
             T + A++  FP +E + L     +S   L  +A+   + K L L  C  +  D GLAA
Sbjct: 130 --TGLTALANGFPRIENLSLIWCPNVSSVGLCSLAQKCTSLKSLDLQGC--YVGDQGLAA 185

Query: 150 IAANCRNLRELDLQESE-VEDLSGHWLSHFPDSYTSLVSLNISCLSNEVSLSALERLLGR 208
           +   C+ L EL+L+  E + D+    +        SL S+ ++  +    LS LE +   
Sbjct: 186 VGKFCKQLEELNLRFCEGLTDVG--VIDLVVGCSKSLKSIGVAASAKITDLS-LEAVGSH 242

Query: 209 CPNMKTLRLNRAVPLD-----------RLPNLLRQCPQLVELG----------------- 240
           C  ++ L L+     D           RL NL  QC  + ++                  
Sbjct: 243 CKLLEVLYLDSEYIHDKGLIAVAQGCHRLKNLKLQCVSVTDVAFAAVGELCTSLERLALY 302

Query: 241 ------------TGVYSAEMRPDVFSN--------LAAAFSGCKQLK--SLSGFWDVLPS 278
                        G  S +++    S+        L A   GCK+L+   ++G  ++   
Sbjct: 303 SFQHFTDKGMRAIGKGSKKLKDLTLSDCYFVSCKGLEAIAHGCKELERVEINGCHNIGTR 362

Query: 279 YLPAVYPVCSGLTSLNLSYAT-VQSSDLVKLISQCPSLQRLWVLDF--IEDAGLDVLAAS 335
            + A+   C  L  L L Y   + +S L ++   C SL+ L ++D   I D  +  +A  
Sbjct: 363 GIEAIGKSCPRLKELALLYCQRIGNSALQEIGKGCKSLEILHLVDCSGIGDIAMCSIAKG 422

Query: 336 CKDLRELRVFPSDPFGFEPNVA-------LTE-----------RGLVSVSEGCPKLQSVL 377
           C++L++L +      G +  ++       LTE           + L+++ +GC   Q  +
Sbjct: 423 CRNLKKLHIRRCYEIGNKGIISIGKHCKSLTELSLRFCDKVGNKALIAIGKGCSLQQLNV 482

Query: 378 YFCRQMSNAALHTIARNRPNFTCFRLCIIEPQAPDYLTLQPLDSGFGAIVEHCKGLQRLS 437
             C Q+S+A +  IAR  P  T   + +++            D     + E C  L+ L 
Sbjct: 483 SGCNQISDAGITAIARGCPQLTHLDISVLQNIG---------DMPLAELGEGCPMLKDLV 533

Query: 438 LSGL--LTDRVFEYIGTYGKKLEMLSLAFA-GDSDLGLHHVLSGCDNLKKLEI 487
           LS    +TD    ++    K LE   + +  G +  G+  V+S C ++KK+ I
Sbjct: 534 LSHCHHITDNGLNHLVQKCKLLETCHMVYCPGITSAGVATVVSSCPHIKKVLI 586


>AT1G47056.1 | Symbols: VFB1 | VIER F-box proteine 1 |
           chr1:17276103-17277659 REVERSE LENGTH=518
          Length = 518

 Score = 81.3 bits (199), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 128/565 (22%), Positives = 219/565 (38%), Gaps = 161/565 (28%)

Query: 7   SFPEEVLEHVFSFIQVDTDRNAISLVCKSWYEIERWCRRKVFVGNCYAVSPMI-----VI 61
           S P+E L  VF F+    +R   +LVC+ W  +E   R ++ +   +A S +I     + 
Sbjct: 42  SLPDECLALVFQFLN-SGNRKRCALVCRRWMIVEGQNRYRLSL---HARSDLITSIPSLF 97

Query: 62  KRFPEVRSIALKGKPHFADFNLVPEGWGGYVCTWIAAMSRAFPWLEEIRLKRMVISDESL 121
            RF  V  ++LK                                      + + I DE+L
Sbjct: 98  SRFDSVTKLSLK-----------------------------------CDRRSVSIGDEAL 122

Query: 122 ELIAKSFKNFKVLVLTSCEGFTTDGLAAIAANCRNLRELDLQESEVEDLSGHWLSHFPDS 181
             I+   +N K L L +C   T  G+AA A NC++L+                       
Sbjct: 123 VKISLRCRNLKRLKLRACRELTDVGMAAFAENCKDLKIF--------------------- 161

Query: 182 YTSLVSLNISCLSNEVSLSALERLLGRCPNMKTLRLNRAVPLDRLPNLLRQCPQLVELGT 241
                    SC S +     ++ +L  C N++ L       + RL       P+++  G 
Sbjct: 162 ---------SCGSCDFGAKGVKAVLDHCSNLEEL------SIKRLRGFTDIAPEMI--GP 204

Query: 242 GVYSAEMRPDVFSNL------AAAFSGCKQLKSL-----SGFWDVLPSYLPAVYPVCSGL 290
           GV ++ ++      L           G K LKSL     SG WD+L   L  +     G+
Sbjct: 205 GVAASSLKSICLKELYNGQCFGPVIVGAKNLKSLKLFRCSGDWDLL---LQEMSGKDHGV 261

Query: 291 TSLNLSYATVQSSDL-VKLISQCPSLQRLWVLDFIE--DAGLDVLAASCKDLRELRVFPS 347
             ++L    +Q SD+ +  IS C SL+ L ++   E  + GL  +A  CK LR+L +   
Sbjct: 262 VEIHLER--MQVSDVALSAISYCSSLESLHLVKTPECTNFGLAAIAEKCKRLRKLHID-- 317

Query: 348 DPFGFEPNVALTERGLVSVSEGCPKLQSVLYFCRQMSNAALHTIARNRPNFTCFRLCIIE 407
              G++ N+ + + GLV+V++ C +LQ ++                              
Sbjct: 318 ---GWKANL-IGDEGLVAVAKFCSQLQELVL----------------------------- 344

Query: 408 PQAPDYLTLQPLDSGFGAIVEHCKGLQRLSLSGLLT--DRVFEYIGTYGKKLEMLSLAFA 465
                 + + P     G +   C  L+RL+L G  T  D     I      L  L +   
Sbjct: 345 ------IGVNPTTLSLGMLAAKCLNLERLALCGCDTFGDPELSCIAAKCPALRKLCIKNC 398

Query: 466 GDSDLGLHHVLSGCDNLKKLEIRDCPFGDKALLANAAK-LETMRSLWM------------ 512
             SD+G+ ++ +GC  L K++I+ C    K +L   A  L T+R +              
Sbjct: 399 PISDVGIENLANGCPGLTKVKIKKC----KGVLGGCADWLRTVRPMLSVNADTMEQEHEE 454

Query: 513 SSCSVSYGACKLLGLKMPKLNVEVI 537
           ++ +   G  +  G++ P+LN +++
Sbjct: 455 AASNDVVGGSQENGIEFPQLNSQIM 479


>AT5G67250.1 | Symbols: SKIP2, VFB4 | SKP1/ASK1-interacting protein
           2 | chr5:26831677-26833260 REVERSE LENGTH=527
          Length = 527

 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 108/451 (23%), Positives = 180/451 (39%), Gaps = 92/451 (20%)

Query: 8   FPEEVLEHVFSFIQVDTDRNAISLVCKSWYEIERWCRRKVFVGNCYAVSPMI--VIKRFP 65
            P+E L HVF F+    DR   SLVCK W  ++   R ++ +     +S  +  +  RF 
Sbjct: 46  LPDECLAHVFQFLGAG-DRKRCSLVCKRWLLVDGQSRHRLSLDAKDEISSFLTSMFNRFD 104

Query: 66  EVRSIALKGKPHFADFNLVPEGWGGYVCTWIAAMSRAFPWLEEIRLKR-MVISDESLELI 124
            V  +AL+        +L  E         +A +S     L  ++L+    I+D  +E  
Sbjct: 105 SVTKLALRCDRK--SVSLSDEA--------LAMISVRCLNLTRVKLRGCREITDLGMEDF 154

Query: 125 AKSFKNFKVLVLTSCEGFTTDGLAAIAANCRNLRELDLQESEVEDLSGHWLSHFPDSYTS 184
           AK+ KN K L + SC  F   G+ A+  +C+ L EL ++       +   L H PD  +S
Sbjct: 155 AKNCKNLKKLSVGSCN-FGAKGVNAMLEHCKLLEELSVKRLRGIHEAAE-LIHLPDDASS 212

Query: 185 LVSLNISCLSNEVSLSALERLLGRCPNMKTLRLNRAVPLDRLPNLLRQCPQLVELGTGVY 244
             SL   CL   V+    E LL     +KTL++ R +                       
Sbjct: 213 -SSLRSICLKELVNGQVFEPLLATTRTLKTLKIIRCL----------------------- 248

Query: 245 SAEMRPDVFSNLAAAFSGCKQLKSLSGFWDVLPSYLPAVYPVCSGLTSLN-LSYATVQSS 303
                                     G WD        +  + +G +SL+ +    +Q S
Sbjct: 249 --------------------------GDWD------KVLQMIANGKSSLSEIHLERLQVS 276

Query: 304 DL-VKLISQCPSLQRLWVLDFIE--DAGLDVLAASCKDLRELRVFPSDPFGFEPNVALTE 360
           D+ +  IS+C +++ L ++   E  + GL  +A  CK LR+L +      G+  N  + +
Sbjct: 277 DIGLSAISKCSNVETLHIVKTPECSNFGLIYVAERCKLLRKLHI-----DGWRTN-RIGD 330

Query: 361 RGLVSVSEGCPKLQSVLYFCRQMSNAALHTIARNRPNFTCFRLCIIEPQAPDYLTLQPLD 420
            GL+SV++ C  LQ ++      ++ +L  IA N        LC               D
Sbjct: 331 EGLLSVAKHCLNLQELVLIGVNATHMSLAAIASNCEKLERLALCGSGTIG---------D 381

Query: 421 SGFGAIVEHCKGLQRLSLSGL-LTDRVFEYI 450
           +    I   C  L++  + G  ++DR  E +
Sbjct: 382 TEIACIARKCGALRKFCIKGCPVSDRGIEAL 412


>AT2G36370.1 | Symbols:  | ubiquitin-protein ligases |
           chr2:15247894-15252800 FORWARD LENGTH=898
          Length = 898

 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 78/281 (27%), Positives = 124/281 (44%), Gaps = 47/281 (16%)

Query: 130 NFKVLVLTSCEGFTTDGLAAIAANCRNLRELDLQESEVEDLSGHWLSHFPDSYTSLVSLN 189
           N + L ++ CEG +   L  +  + + ++ L L++++V D     L  FP S  +L +L+
Sbjct: 505 NLQTLHMSKCEGISETSLLNLITHSQKMKSLCLRDTKVSD---SVLCEFPGS--TLEALD 559

Query: 190 ISCLSNEVSLSALERLLGRCPNMKTLRLNRAVPLDRLPNLLRQCPQLVELGTGVYSAEMR 249
           IS  +  +S  AL R++ R PN+KTL+              R C  L++L       + R
Sbjct: 560 IS--NTTISWMALARVISRNPNLKTLK-------------ARGCKNLLQL-----EVDGR 599

Query: 250 PDVFSNLAAAFSGCKQLKSLSGF------WDVLPSYLPAVYPVCSGLTSLNLSYATVQSS 303
            D FS L +     K L   SG       W        ++ P  S L  +++        
Sbjct: 600 TDNFSPLVSGQEVFKCLSKGSGLEELEIGWGFSYFSFESLRPAASFLRVISVGLGASLGE 659

Query: 304 DLVKLI-SQCPSLQRLWVLDF--IEDAGLDVLAASCKDLRELRVFPSDPFGFEPNVALTE 360
           D++KL+ S CP L+ + VL F  I D+ L  +  S K L+EL +  S  FG        E
Sbjct: 660 DVLKLLPSTCPLLESI-VLHFQEISDSALTSVLTSLKHLQELAL--SYCFG--------E 708

Query: 361 RGLVSVSEGCPKLQSVLY--FCRQMSNAALHTIARNRPNFT 399
             L S     P L+ +      R M+N  L  + ++ PN T
Sbjct: 709 ISLQSFKFSMPNLRKLRLERVTRWMTNDDLLVLTQSCPNLT 749


>AT5G25350.1 | Symbols: EBF2 | EIN3-binding F box protein 2 |
           chr5:8794842-8796882 REVERSE LENGTH=623
          Length = 623

 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 70/230 (30%), Positives = 108/230 (46%), Gaps = 34/230 (14%)

Query: 312 CPSLQ--RLWVLDFIEDAGLDVLAASCKDLRELRVFPSDPFGFEPNVALTERGLVSVSEG 369
           CPSL+   LW L  + D GL  +A SC  + +L +             +T+ GLV+++E 
Sbjct: 166 CPSLRIVSLWNLPAVSDLGLSEIARSCPMIEKLDLSRCP--------GITDSGLVAIAEN 217

Query: 370 CPKLQSV-LYFCRQMSNAALHTIARNRPNF------TCFRL-----CIIEPQAPDYLT-- 415
           C  L  + +  C  + N  L  IAR   N       +C R+       +  QA  YLT  
Sbjct: 218 CVNLSDLTIDSCSGVGNEGLRAIARRCVNLRSISIRSCPRIGDQGVAFLLAQAGSYLTKV 277

Query: 416 -LQPLD-SGFG-AIVEH-CKGLQRLSLSGL--LTDRVFEYIGTYG--KKLEMLS-LAFAG 466
            LQ L+ SG   A++ H    +  L L GL  + ++ F  +G     KKL+ LS ++  G
Sbjct: 278 KLQMLNVSGLSLAVIGHYGAAVTDLVLHGLQGVNEKGFWVMGNAKGLKKLKSLSVMSCRG 337

Query: 467 DSDLGLHHVLSGCDNLKKLEIRDCPF-GDKALLANAAKLETMRSLWMSSC 515
            +D+GL  V +GC +LK + +  C     K L+A A    ++ SL +  C
Sbjct: 338 MTDVGLEAVGNGCPDLKHVSLNKCLLVSGKGLVALAKSALSLESLKLEEC 387


>AT5G23340.1 | Symbols:  | RNI-like superfamily protein |
           chr5:7856314-7857983 FORWARD LENGTH=405
          Length = 405

 Score = 55.8 bits (133), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 80/352 (22%), Positives = 142/352 (40%), Gaps = 59/352 (16%)

Query: 7   SFPEEVLEHVFSFIQVDTDRNAISLVCKSWYEIERWCRRKVFVGNCYAVSPMIVIKRFPE 66
           +  ++ L  V S +  D D+    LVCK W  ++   R+K                    
Sbjct: 9   ALTDDELRWVLSRLDSDKDKEVFGLVCKRWLNLQSTDRKK-------------------- 48

Query: 67  VRSIALKGKPHFADFNLVPEGWGGYVCTWIAAMSRAFPWLEEIRLKRMV-------ISDE 119
              +A +  PH                  +  ++  F  + E+ L + +       ++D 
Sbjct: 49  ---LAARAGPHM-----------------LRRLASRFTQIVELDLSQSISRSFYPGVTDS 88

Query: 120 SLELIAKSFKNFKVLVLTSCEGFTTDGLAAIAANCRNLRELDLQESEVEDLSGHWLSHFP 179
            L +I++ FK  +VL L +C+G T  GLA+I      L+ LD+  S    LS   LS   
Sbjct: 89  DLAVISEGFKFLRVLNLHNCKGITDTGLASIGRCLSLLQFLDV--SYCRKLSDKGLSAVA 146

Query: 180 DSYTSLVSLNISCLSNEVSLSALERLLGRCPNMKTLRLNRAVPLDR--LPNLLRQCPQLV 237
           +    L +L+++     ++  +L+ L  RC +++ L L     +    L +L++ C ++ 
Sbjct: 147 EGCHDLRALHLA-GCRFITDESLKSLSERCRDLEALGLQGCTNITDSGLADLVKGCRKIK 205

Query: 238 ELGTGVYSAEMRPDVFSNLAAAFSGCKQLKSLSGFWDVLPSYLPAVYPVCSGLTSLNLSY 297
            L     S      V S   A  S  K LK L   + V    + ++   C  L +L +  
Sbjct: 206 SLDINKCSNVGDAGVSSVAKACASSLKTLKLLD-CYKVGNESISSLAQFCKNLETLIIGG 264

Query: 298 ATVQSSDLVKLISQC--PSLQRL---WVLDFIEDAGLDVLAASCKDLRELRV 344
               S + + L++     SL+ L   W L+ I D+ L  +   CK+L  L +
Sbjct: 265 CRDISDESIMLLADSCKDSLKNLRMDWCLN-ISDSSLSCILKQCKNLEALDI 315



 Score = 49.7 bits (117), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 50/177 (28%), Positives = 81/177 (45%), Gaps = 17/177 (9%)

Query: 332 LAASCKDLRELRVFPSDPFGFEPNVALTERGLVSVSEGCPKLQSV-LYFCRQMSNAALHT 390
           LA+    + EL +  S    F P V  T+  L  +SEG   L+ + L+ C+ +++  L +
Sbjct: 61  LASRFTQIVELDLSQSISRSFYPGV--TDSDLAVISEGFKFLRVLNLHNCKGITDTGLAS 118

Query: 391 IARNRPNFTCFRLCIIEPQAPDYLTLQPL-DSGFGAIVEHCKGLQRLSLSG--LLTDRVF 447
           I R          C+   Q  D    + L D G  A+ E C  L+ L L+G   +TD   
Sbjct: 119 IGR----------CLSLLQFLDVSYCRKLSDKGLSAVAEGCHDLRALHLAGCRFITDESL 168

Query: 448 EYIGTYGKKLEMLSLAFAGD-SDLGLHHVLSGCDNLKKLEIRDCPFGDKALLANAAK 503
           + +    + LE L L    + +D GL  ++ GC  +K L+I  C     A +++ AK
Sbjct: 169 KSLSERCRDLEALGLQGCTNITDSGLADLVKGCRKIKSLDINKCSNVGDAGVSSVAK 225


>AT2G25490.1 | Symbols: EBF1, FBL6 | EIN3-binding F box protein 1 |
           chr2:10848018-10850275 REVERSE LENGTH=628
          Length = 628

 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 136/600 (22%), Positives = 230/600 (38%), Gaps = 95/600 (15%)

Query: 8   FPEEVLEHVFSFIQVDTDRNAISLVCKSWYEIERWCRRKVF---------VGNCYA-VSP 57
            P+E L  +F  +    +R+A + V K W  +    R+K             +C   +S 
Sbjct: 67  LPDECLFEIFRRLSGPQERSACAFVSKQWLTLVSSIRQKEIDVPSKITEDGDDCEGCLSR 126

Query: 58  MIVIKRFPEVR----SIALKGKPHFADFNLVPEGWGGYVCTWIAAMSRAFPWLEEIRLKR 113
            +  K+  +VR    ++   G+      ++            + ++ R+ P L  + L  
Sbjct: 127 SLDGKKATDVRLAAIAVGTAGRGGLGKLSIRGSNSAKVSDLGLRSIGRSCPSLGSLSLWN 186

Query: 114 M-VISDESLELIAKSFKNFKVLVLTSCEGFTTDGLAAIAANCRNLRELDLQE-SEVEDLS 171
           +  I+D  L  IA+     + L L  C   T  GL AIA +C NL EL L+  S + D  
Sbjct: 187 VSTITDNGLLEIAEGCAQLEKLELNRCSTITDKGLVAIAKSCPNLTELTLEACSRIGD-- 244

Query: 172 GHWLSHFPDSYTSLVSLNISCLSNEVSLSALERLLGRCPNMKTLRLNRAVPLDRLPNLLR 231
                        L+++  SC S   S+S     L R   + +L  N    L +L   + 
Sbjct: 245 -----------EGLLAIARSC-SKLKSVSIKNCPLVRDQGIASLLSNTTCSLAKLKLQML 292

Query: 232 QCPQLVELGTGVYSAEMRPDVFSNLAAAFSGCKQLKSLSGFWDV-----LPSYLPAVYPV 286
               +     G Y   +   V + L+          S  GFW +     L          
Sbjct: 293 NVTDVSLAVVGHYGLSITDLVLAGLSHV--------SEKGFWVMGNGVGLQKLNSLTITA 344

Query: 287 CSGLTSLNLSYATVQSSDLVK-LISQCPSLQRLWVLDFIEDAGLDVLAASCKDLRELRV- 344
           C G+T + L        ++ K +IS+ P          + D GL   A +   L  L++ 
Sbjct: 345 CQGVTDMGLESVGKGCPNMKKAIISKSP---------LLSDNGLVSFAKASLSLESLQLE 395

Query: 345 --FPSDPFGFEPNV--------------ALTERGLVS---VSEGCPKLQSV-LYFCRQMS 384
                  FGF  ++               L+ R L +    S  C  L+S+ +  C    
Sbjct: 396 ECHRVTQFGFFGSLLNCGEKLKAFSLVNCLSIRDLTTGLPASSHCSALRSLSIRNCPGFG 455

Query: 385 NAALHTIARNRPNFTCFRLCIIEPQAPDYLTLQPLDSGFGAIVEHCKGLQRLSLSGL--L 442
           +A L  I +  P      LC ++            +SGF  +++    L +++ SG   L
Sbjct: 456 DANLAAIGKLCPQLEDIDLCGLKGIT---------ESGFLHLIQS--SLVKINFSGCSNL 504

Query: 443 TDRVFEYI-GTYGKKLEMLSLAFAGD-SDLGLHHVLSGCDNLKKLEIRDCPFGDKAL--L 498
           TDRV   I    G  LE+L++    + +D  L  + + C  L  L+I  C   D  +  L
Sbjct: 505 TDRVISAITARNGWTLEVLNIDGCSNITDASLVSIAANCQILSDLDISKCAISDSGIQAL 564

Query: 499 ANAAKLETMRSLWMSSCSVSYGAC--KLLGLKMPKLNVEVIDERGPPDSRPDSCPVEKLY 556
           A++ KL+ ++ L ++ CS+        ++GL    L + +   R   +S  D   VE+LY
Sbjct: 565 ASSDKLK-LQILSVAGCSMVTDKSLPAIVGLGSTLLGLNLQQCRSISNSTVDFL-VERLY 622


>AT1G21410.1 | Symbols: SKP2A | F-box/RNI-like superfamily protein |
           chr1:7497479-7499386 FORWARD LENGTH=360
          Length = 360

 Score = 49.7 bits (117), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 60/228 (26%), Positives = 108/228 (47%), Gaps = 51/228 (22%)

Query: 182 YTSLVSLNISCLSNEVSLSALERLLGRCPNMKTLRLNRAVPL-DR-LPNLLRQCPQLVEL 239
           +  L +LN+     ++  +A+E +   C  ++ L L++++ + DR L  L   CP L +L
Sbjct: 89  FVKLQTLNLRQDKPQLEDNAVEAIANHCHELQELDLSKSLKITDRSLYALAHGCPDLTKL 148

Query: 240 G-TGVYSAEMRPDVFSNLAAAFSG--CKQLKSLS---GFWDVLPSYLPAVYPVCSGLTSL 293
             +G  S       FS+ A A+    C++LK L+       V  + L A+   C+ + SL
Sbjct: 149 NLSGCTS-------FSDTAIAYLTRFCRKLKVLNLCGCVKAVTDNALEAIGNNCNQMQSL 201

Query: 294 NLSYATVQSSDLVKLISQCPSLQRLWVLDFIEDAGLDVLAASCKDLRELRVFPSDPFGFE 353
           NL +                        + I D G+  LA  C DLR L     D  G  
Sbjct: 202 NLGWC-----------------------ENISDDGVMSLAYGCPDLRTL-----DLCGC- 232

Query: 354 PNVALTERGLVSVSEGCPKLQSV-LYFCRQMSNAALHTIA----RNRP 396
             V +T+  +V++++ C  L+S+ LY+CR +++ A++++A    +N+P
Sbjct: 233 --VLITDESVVALADWCVHLRSLGLYYCRNITDRAMYSLAQSGVKNKP 278