Miyakogusa Predicted Gene

Lj1g3v4764360.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4764360.1 tr|B9I9Y2|B9I9Y2_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_572763 PE=4
SV=1,24.74,0.0005,seg,NULL; BRCT domain,BRCT domain; BRCT,BRCT domain;
coiled-coil,NULL; no description,NULL; PAX TRAN,CUFF.33192.1
         (859 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G21480.1 | Symbols:  | BRCT domain-containing DNA repair prot...   255   1e-67
AT4G03130.1 | Symbols:  | BRCT domain-containing DNA repair prot...   253   3e-67
AT2G41450.1 | Symbols:  | N-acetyltransferases;N-acetyltransfera...    65   1e-10
AT2G41450.2 | Symbols:  | N-acetyltransferases;N-acetyltransfera...    65   2e-10

>AT3G21480.1 | Symbols:  | BRCT domain-containing DNA repair protein |
            chr3:7567730-7571990 FORWARD LENGTH=1041
          Length = 1041

 Score =  255 bits (651), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 132/246 (53%), Positives = 164/246 (66%), Gaps = 1/246 (0%)

Query: 615  LGVPESSPVLVWRDLRHRRDMAHVRVLFSQHLEDSVIKKQKKILARFNIPIASSSMEATH 674
            L VP + P+   +  R RRD+  + VLFSQHL++ V K QKKILARF+I  ASS  EATH
Sbjct: 794  LTVPVAEPISETKSTRKRRDLGSICVLFSQHLDEDVTKHQKKILARFDISEASSMKEATH 853

Query: 675  FVADKFTRTKNMLEVMALGKIVVTHLWLESCGQANCFIDEKNYILRDMKKEKEIGFSMPA 734
            F+AD FTRT+NMLE +A GK VVT  WLES  Q N ++DE  YILRD KKEKE  F+M  
Sbjct: 854  FIADNFTRTRNMLEAIASGKPVVTTQWLESIDQVNIYVDEDMYILRDSKKEKEFCFNMGV 913

Query: 735  SLARARQKPLLKGRRVYITPHIKPDKEMVTNLVTAVHGQVLDESQICGXXXXXXXXXXXX 794
            SLARARQ PLL+GRRV+ITP+ KP    +T LV AVHG  ++                  
Sbjct: 914  SLARARQFPLLQGRRVFITPNTKPALNTITTLVKAVHGLPVERLGRSSLSEDKVPENLLV 973

Query: 795  XSCEDDYAICCDFLKRGTAVYSSELVLNGIVVQKLEFERHKLFMNQVRRINPSTSNRFGK 854
             SCE+D AIC  FL+RG  VYSSEL+LNGIV Q+LE+ER++LF + VRR   +   + GK
Sbjct: 974  LSCEEDRAICIPFLERGAEVYSSELLLNGIVTQRLEYERYRLFTDHVRRTRSTIWIKDGK 1033

Query: 855  -VYRRR 859
              ++RR
Sbjct: 1034 GKFQRR 1039


>AT4G03130.1 | Symbols:  | BRCT domain-containing DNA repair protein
           | chr4:1387781-1390646 REVERSE LENGTH=766
          Length = 766

 Score =  253 bits (647), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 121/230 (52%), Positives = 161/230 (70%), Gaps = 1/230 (0%)

Query: 615 LGVPESSPVLVWRDLRHRRDMAHVRVLFSQHLEDSVIKKQKKILARFNIPIASSSMEATH 674
           LG P      VW+DLR RR++AHVRVLFSQ+L+D  +K+QKKI+ R  I  ASSS ++TH
Sbjct: 538 LGGPGKIGDFVWKDLRKRRNLAHVRVLFSQNLDDETVKQQKKIMVRLGISPASSSADSTH 597

Query: 675 FVADKFTRTKNMLEVMALGKIVVTHLWLESCGQANCFIDEKNYILRDMKKEKEIGFSMPA 734
           F+AD+F RT+NMLE +ALGK VVT +WLESC Q  C IDEK+YILRD+KKEK+ GF +  
Sbjct: 598 FIADRFARTRNMLEAIALGKFVVTPIWLESCAQTRCLIDEKSYILRDIKKEKD-GFCLLT 656

Query: 735 SLARARQKPLLKGRRVYITPHIKPDKEMVTNLVTAVHGQVLDESQICGXXXXXXXXXXXX 794
           SLARA+Q PLLKG +V ITP IKP + M+T+LV    GQV++ S+I              
Sbjct: 657 SLARAKQHPLLKGFKVCITPSIKPSRGMITDLVKMTQGQVVEASEIIAAEDRNFPEDVLI 716

Query: 795 XSCEDDYAICCDFLKRGTAVYSSELVLNGIVVQKLEFERHKLFMNQVRRI 844
            SC++D   C  F+ +G  +++SEL+LNGIV+QKLE+ R     +Q +R+
Sbjct: 717 LSCKEDRDFCLPFVNQGAVIFTSELLLNGIVIQKLEYARFATHYHQNQRL 766


>AT2G41450.1 | Symbols:  | N-acetyltransferases;N-acetyltransferases
           | chr2:17278190-17281637 FORWARD LENGTH=612
          Length = 612

 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 44/207 (21%), Positives = 92/207 (44%), Gaps = 7/207 (3%)

Query: 628 DLRHRRDMAHVRVLFSQHLEDSVIKKQKKILARFNIPIASSSMEATHFVADKFTRTKNML 687
           D+  R +  H R+L     +++      +++ +    +      +TH V  K  +T N+ 
Sbjct: 403 DMEARPNGQHYRILLMDICDENKRAWLTEVIRKLGGTVTLDGTTSTHIVTGKVRKTLNLC 462

Query: 688 EVMALGKIVVTHLWLESCGQANCFIDEKNYILRDMKKEKEIGFSMPASLARARQKP--LL 745
             +  G  +V+  WL+   +   F +E ++IL D   + +    + +++ RA+ +P  LL
Sbjct: 463 TALCSGAWIVSPSWLKESVREGRFANEASHILHDEDYQLKYDTDLKSTVLRAKARPNSLL 522

Query: 746 KGRRVYITPHIKPDKEMVTNLVTAVHGQVLDESQICGXXXXXXXXXXXXXSCEDDYAICC 805
           KG  + + P+I+   +  + ++ +  G V     I G              CE+D     
Sbjct: 523 KGYDICVGPNIELPIKTSSAIIKSAGGNV-----ISGVNKVKEASKAIYIGCEEDTVGAL 577

Query: 806 DFLKRGTAVYSSELVLNGIVVQKLEFE 832
              K+G   +SSE  +N ++ Q+L+ +
Sbjct: 578 FAAKKGIWTFSSEWFMNCVMKQQLDLQ 604


>AT2G41450.2 | Symbols:  | N-acetyltransferases;N-acetyltransferases
           | chr2:17278670-17281637 FORWARD LENGTH=549
          Length = 549

 Score = 65.1 bits (157), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 44/207 (21%), Positives = 92/207 (44%), Gaps = 7/207 (3%)

Query: 628 DLRHRRDMAHVRVLFSQHLEDSVIKKQKKILARFNIPIASSSMEATHFVADKFTRTKNML 687
           D+  R +  H R+L     +++      +++ +    +      +TH V  K  +T N+ 
Sbjct: 340 DMEARPNGQHYRILLMDICDENKRAWLTEVIRKLGGTVTLDGTTSTHIVTGKVRKTLNLC 399

Query: 688 EVMALGKIVVTHLWLESCGQANCFIDEKNYILRDMKKEKEIGFSMPASLARARQKP--LL 745
             +  G  +V+  WL+   +   F +E ++IL D   + +    + +++ RA+ +P  LL
Sbjct: 400 TALCSGAWIVSPSWLKESVREGRFANEASHILHDEDYQLKYDTDLKSTVLRAKARPNSLL 459

Query: 746 KGRRVYITPHIKPDKEMVTNLVTAVHGQVLDESQICGXXXXXXXXXXXXXSCEDDYAICC 805
           KG  + + P+I+   +  + ++ +  G V     I G              CE+D     
Sbjct: 460 KGYDICVGPNIELPIKTSSAIIKSAGGNV-----ISGVNKVKEASKAIYIGCEEDTVGAL 514

Query: 806 DFLKRGTAVYSSELVLNGIVVQKLEFE 832
              K+G   +SSE  +N ++ Q+L+ +
Sbjct: 515 FAAKKGIWTFSSEWFMNCVMKQQLDLQ 541