Miyakogusa Predicted Gene

Lj1g3v4763790.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4763790.1 Non Chatacterized Hit- tr|J0XGV8|J0XGV8_LOALO
Uncharacterized protein OS=Loa loa PE=4 SV=1,32.64,2e-17,no
description,NULL; UBA,Ubiquitin-associated/translation elongation
factor EF1B, N-terminal, eukary,CUFF.33165.1
         (402 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G58460.1 | Symbols: ATRBL15, RBL15 | RHOMBOID-like protein 15...   550   e-157
AT3G58460.2 | Symbols: RBL15 | RHOMBOID-like protein 15 | chr3:2...   536   e-152
AT3G17611.1 | Symbols: ATRBL14, RBL14 | RHOMBOID-like protein 14...    71   1e-12
AT3G59520.1 | Symbols: ATRBL13, RBL13 | RHOMBOID-like protein 13...    65   7e-11
AT3G17611.2 | Symbols: ATRBL14, RBL14 | RHOMBOID-like protein 14...    54   3e-07

>AT3G58460.1 | Symbols: ATRBL15, RBL15 | RHOMBOID-like protein 15 |
           chr3:21623374-21626348 REVERSE LENGTH=403
          Length = 403

 Score =  550 bits (1417), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 271/405 (66%), Positives = 314/405 (77%), Gaps = 11/405 (2%)

Query: 7   MRPNIVSEAGVSTRVNQWWESIPFLTSAVVVVCGAIYLVCLLVGYDSFAEICFLPSAVVS 66
           MRPNIV+EAGV TRV QWW +IPFLTS+VVVVCG IYL+CLL GYD+F E+CFLPSA++S
Sbjct: 1   MRPNIVTEAGVQTRVGQWWNAIPFLTSSVVVVCGVIYLICLLTGYDTFYEVCFLPSAIIS 60

Query: 67  RFQVYRIYTAILFHGSLLHVLFNMMALVPLGSELERIMGSVRLLYVTILLATSNAIFHVL 126
           RFQVYR YTAI+FHGSLLHVLFNMMALVP+GSELERIMGSVRLLY+T+LLAT+NA+ H+L
Sbjct: 61  RFQVYRFYTAIIFHGSLLHVLFNMMALVPMGSELERIMGSVRLLYLTVLLATTNAVLHLL 120

Query: 127 IALLVTYNPFVKFDYLMNECAIGFSGVLFSMIVIETSLSGVQSRSVFGLFNVPAKWYAXX 186
           IA L  YNPF ++D+LMNECAIGFSG+LFSMIVIETSLSGV SRSVFGLFNVPAK Y   
Sbjct: 121 IASLAGYNPFYQYDHLMNECAIGFSGILFSMIVIETSLSGVTSRSVFGLFNVPAKLYPWI 180

Query: 187 XXXXXXXXMQNVSLLGHLCGILSGFAYTYGLFNFLIPGTXXXXXXXXXXXXXXCVRRPKF 246
                   M NVSLLGHLCGILSGF+Y+YGLFNFL+PG+               +RRPKF
Sbjct: 181 LLIVFQLLMTNVSLLGHLCGILSGFSYSYGLFNFLMPGSSFFTTIESASWMSSFIRRPKF 240

Query: 247 IVCTGGNPSGYIPTHTSQNSTTSGLLSGNIWRNLSSLMPQREVSAQSAEDSRFPGAGRTL 306
           I+CTGGNPS YIPT+++QN+T+SG  +GN WR+LSS +PQRE S QS+EDSRFPG GRTL
Sbjct: 241 IMCTGGNPSSYIPTYSAQNTTSSGFSTGNAWRSLSSWLPQREASNQSSEDSRFPGRGRTL 300

Query: 307 GSSQGQMASGIQSNSNLQARLLEDSSPNQPSEGRHAVDNXXXXXXGVPHHQAAVV----- 361
            +++   A   +++ NL ARLLEDSS   P     A  N        P   AAV+     
Sbjct: 301 STARDPTAPAGETDPNLHARLLEDSS--SPDRLSDATVNTVADSRQAPIANAAVLPQSQG 358

Query: 362 ----SEEEIKKLVAMGFDRTQVEVALAAADGDLNVAVEILMSQQG 402
               SEE+I+KLVAMGFDRTQVEVALAAAD DL VAVEILMSQQ 
Sbjct: 359 RVAASEEQIQKLVAMGFDRTQVEVALAAADDDLTVAVEILMSQQA 403


>AT3G58460.2 | Symbols: RBL15 | RHOMBOID-like protein 15 |
           chr3:21623374-21626642 REVERSE LENGTH=426
          Length = 426

 Score =  536 bits (1380), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 264/397 (66%), Positives = 306/397 (77%), Gaps = 11/397 (2%)

Query: 15  AGVSTRVNQWWESIPFLTSAVVVVCGAIYLVCLLVGYDSFAEICFLPSAVVSRFQVYRIY 74
           AGV TRV QWW +IPFLTS+VVVVCG IYL+CLL GYD+F E+CFLPSA++SRFQVYR Y
Sbjct: 32  AGVQTRVGQWWNAIPFLTSSVVVVCGVIYLICLLTGYDTFYEVCFLPSAIISRFQVYRFY 91

Query: 75  TAILFHGSLLHVLFNMMALVPLGSELERIMGSVRLLYVTILLATSNAIFHVLIALLVTYN 134
           TAI+FHGSLLHVLFNMMALVP+GSELERIMGSVRLLY+T+LLAT+NA+ H+LIA L  YN
Sbjct: 92  TAIIFHGSLLHVLFNMMALVPMGSELERIMGSVRLLYLTVLLATTNAVLHLLIASLAGYN 151

Query: 135 PFVKFDYLMNECAIGFSGVLFSMIVIETSLSGVQSRSVFGLFNVPAKWYAXXXXXXXXXX 194
           PF ++D+LMNECAIGFSG+LFSMIVIETSLSGV SRSVFGLFNVPAK Y           
Sbjct: 152 PFYQYDHLMNECAIGFSGILFSMIVIETSLSGVTSRSVFGLFNVPAKLYPWILLIVFQLL 211

Query: 195 MQNVSLLGHLCGILSGFAYTYGLFNFLIPGTXXXXXXXXXXXXXXCVRRPKFIVCTGGNP 254
           M NVSLLGHLCGILSGF+Y+YGLFNFL+PG+               +RRPKFI+CTGGNP
Sbjct: 212 MTNVSLLGHLCGILSGFSYSYGLFNFLMPGSSFFTTIESASWMSSFIRRPKFIMCTGGNP 271

Query: 255 SGYIPTHTSQNSTTSGLLSGNIWRNLSSLMPQREVSAQSAEDSRFPGAGRTLGSSQGQMA 314
           S YIPT+++QN+T+SG  +GN WR+LSS +PQRE S QS+EDSRFPG GRTL +++   A
Sbjct: 272 SSYIPTYSAQNTTSSGFSTGNAWRSLSSWLPQREASNQSSEDSRFPGRGRTLSTARDPTA 331

Query: 315 SGIQSNSNLQARLLEDSSPNQPSEGRHAVDNXXXXXXGVPHHQAAVV---------SEEE 365
              +++ NL ARLLEDSS   P     A  N        P   AAV+         SEE+
Sbjct: 332 PAGETDPNLHARLLEDSS--SPDRLSDATVNTVADSRQAPIANAAVLPQSQGRVAASEEQ 389

Query: 366 IKKLVAMGFDRTQVEVALAAADGDLNVAVEILMSQQG 402
           I+KLVAMGFDRTQVEVALAAAD DL VAVEILMSQQ 
Sbjct: 390 IQKLVAMGFDRTQVEVALAAADDDLTVAVEILMSQQA 426


>AT3G17611.1 | Symbols: ATRBL14, RBL14 | RHOMBOID-like protein 14 |
           chr3:6024946-6026173 FORWARD LENGTH=334
          Length = 334

 Score = 71.2 bits (173), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 56/163 (34%), Positives = 84/163 (51%), Gaps = 11/163 (6%)

Query: 55  AEICFLPSAVVSRFQVYRIYTAILFHGSLLHVLFNMMALVPLGSELERIMGSVRLL-YVT 113
           +E+ F P  +     + R++ +  +H +  H+++NMM+L+  G +LE  MGS      V 
Sbjct: 61  SEVWFNPHLIFKHKDLKRLFLSAFYHVNEPHLVYNMMSLLWKGIKLETSMGSSEFASMVF 120

Query: 114 ILLATSNAIFHVLIALLVTYNPFVKFDY---LMNECAIGFSGVLFSMIVIETSLSGVQSR 170
            L+  S  +  +L   L+       FDY     NE A+GFSGVLF+M V+  S +   S 
Sbjct: 121 TLIGMSQGVTLLLAKSLLL-----LFDYDRAYYNEYAVGFSGVLFAMKVVLNSQAEDYS- 174

Query: 171 SVFGLFNVPAKWYAXXXXXXXXXXMQNVSLLGHLCGILSGFAY 213
           SV+G+  VP K+ A          + N S LGHL GIL+G  Y
Sbjct: 175 SVYGIL-VPTKYAAWAELILVQMFVPNASFLGHLGGILAGIIY 216


>AT3G59520.1 | Symbols: ATRBL13, RBL13 | RHOMBOID-like protein 13 |
           chr3:21992054-21992863 FORWARD LENGTH=269
          Length = 269

 Score = 65.5 bits (158), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 58/196 (29%), Positives = 92/196 (46%), Gaps = 21/196 (10%)

Query: 32  TSAVVVVCGAIYLVCLL--VGYDSFAEICFLPSAVVSRFQVYRIYTAILFHGSLLHVLFN 89
           TS +V +C  I+ V     +GY        L          +R+ T+ L H S+LH++FN
Sbjct: 15  TSCIVTLCSVIWFVIQKKSIGYSQVG----LSYETAIEGHYWRMITSALSHISVLHLVFN 70

Query: 90  MMALVPLG--SELERI-MGSVRLLYVTILLATSNA-----IFHVLIALLVTYNPFVKFDY 141
           M AL  LG   +L  + +G+   L+ T++L   +      I+H+LIA         K DY
Sbjct: 71  MSALWSLGVVEQLGHVGLGTAYYLHYTLVLVVFSGVLVIGIYHLLIARF-------KIDY 123

Query: 142 LMNECAIGFSGVLFSMIVIETSLSGVQSRSVFGLFNVPAKWYAXXXXXXXXXXMQNVSLL 201
                A+G+S V+F  + I +        ++FGL ++P  +            +   S L
Sbjct: 124 FRRVTAVGYSCVVFGWMTILSVKQPSSKLNLFGLLSLPISFAPFESLIFTSIIVPQASFL 183

Query: 202 GHLCGILSGFAYTYGL 217
           GHL GIL G+A ++GL
Sbjct: 184 GHLSGILVGYAISWGL 199


>AT3G17611.2 | Symbols: ATRBL14, RBL14 | RHOMBOID-like protein 14 |
           chr3:6025454-6026173 FORWARD LENGTH=239
          Length = 239

 Score = 53.5 bits (127), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 49/128 (38%), Positives = 65/128 (50%), Gaps = 11/128 (8%)

Query: 90  MMALVPLGSELERIMGSVRLL-YVTILLATSNAIFHVLIALLVTYNPFVKFDY---LMNE 145
           MM+L+  G +LE  MGS      V  L+  S  +  +L   L+       FDY     NE
Sbjct: 1   MMSLLWKGIKLETSMGSSEFASMVFTLIGMSQGVTLLLAKSLLL-----LFDYDRAYYNE 55

Query: 146 CAIGFSGVLFSMIVIETSLSGVQSRSVFGLFNVPAKWYAXXXXXXXXXXMQNVSLLGHLC 205
            A+GFSGVLF+M V+  S +   S SV+G+  VP K+ A          + N S LGHL 
Sbjct: 56  YAVGFSGVLFAMKVVLNSQAEDYS-SVYGIL-VPTKYAAWAELILVQMFVPNASFLGHLG 113

Query: 206 GILSGFAY 213
           GIL+G  Y
Sbjct: 114 GILAGIIY 121