Miyakogusa Predicted Gene

Lj1g3v4763720.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4763720.1 Non Chatacterized Hit- tr|I3TA70|I3TA70_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,95.35,0,Ribosomal_S8,Ribosomal protein S8; 30S RIBOSOMAL PROTEIN
S8,Ribosomal protein S8; no description,NUL,CUFF.33157.1
         (157 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G29430.1 | Symbols: rps15ae | ribosomal protein S15A E | chr4...   226   6e-60
AT2G19720.1 | Symbols: rps15ab | ribosomal protein S15A B | chr2...   223   3e-59
AT5G59850.1 | Symbols:  | Ribosomal protein S8 family protein | ...   136   5e-33
AT1G07770.2 | Symbols: RPS15A | ribosomal protein S15A | chr1:24...   136   5e-33
AT1G07770.1 | Symbols: RPS15A | ribosomal protein S15A | chr1:24...   136   5e-33
AT2G39590.1 | Symbols:  | Ribosomal protein S8 family protein | ...   135   8e-33
AT3G46040.1 | Symbols: RPS15AD | ribosomal protein S15A D | chr3...   134   3e-32

>AT4G29430.1 | Symbols: rps15ae | ribosomal protein S15A E |
           chr4:14472440-14473383 FORWARD LENGTH=129
          Length = 129

 Score =  226 bits (575), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 102/129 (79%), Positives = 121/129 (93%)

Query: 29  MGRRILNDALRTMVNAEKRGKAAVELSHISTVISSFLQIMKNRGYVKNFQVYDPHRVGRI 88
           MGRRILNDALRT+VNAE+RGKA+VEL  ISTV+SSFL+IMK +GY+KNFQVYDPHRVGRI
Sbjct: 1   MGRRILNDALRTIVNAERRGKASVELKPISTVMSSFLRIMKEKGYIKNFQVYDPHRVGRI 60

Query: 89  TVELQGRINDCKALTYRQDLKARDIEAYRLNTLPTNQWGYVVISTPDGVLDHEEAIRKNV 148
           TV+LQGR+NDCKALTYRQD++A++IE Y   TLPT QWGYVVI+TPDG+LDHEEAI++NV
Sbjct: 61  TVDLQGRVNDCKALTYRQDVRAKEIEKYTERTLPTRQWGYVVITTPDGILDHEEAIKRNV 120

Query: 149 GGQVLGYFH 157
           GGQVLG+F+
Sbjct: 121 GGQVLGFFY 129


>AT2G19720.1 | Symbols: rps15ab | ribosomal protein S15A B |
           chr2:8510223-8511258 REVERSE LENGTH=129
          Length = 129

 Score =  223 bits (569), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 101/129 (78%), Positives = 119/129 (92%)

Query: 29  MGRRILNDALRTMVNAEKRGKAAVELSHISTVISSFLQIMKNRGYVKNFQVYDPHRVGRI 88
           MGRRILNDALRT+VNAEKRGKA+VEL  +STV+SSFL+IMK +GY+KNFQV+DPHRVGRI
Sbjct: 1   MGRRILNDALRTIVNAEKRGKASVELKPVSTVMSSFLKIMKEKGYIKNFQVHDPHRVGRI 60

Query: 89  TVELQGRINDCKALTYRQDLKARDIEAYRLNTLPTNQWGYVVISTPDGVLDHEEAIRKNV 148
           TV+LQGR+NDCKALTYRQD+KA +I  Y   TLPT QWGY+VI+TPDG+LDHEEAI++NV
Sbjct: 61  TVDLQGRVNDCKALTYRQDVKANEIGQYTERTLPTRQWGYIVITTPDGILDHEEAIKRNV 120

Query: 149 GGQVLGYFH 157
           GGQVLG+FH
Sbjct: 121 GGQVLGFFH 129


>AT5G59850.1 | Symbols:  | Ribosomal protein S8 family protein |
           chr5:24112499-24113084 REVERSE LENGTH=130
          Length = 130

 Score =  136 bits (343), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 62/125 (49%), Positives = 88/125 (70%)

Query: 33  ILNDALRTMVNAEKRGKAAVELSHISTVISSFLQIMKNRGYVKNFQVYDPHRVGRITVEL 92
           +LNDAL++M NAEKRGK  V +   S VI  FL +M+  GY+  F+  D HR G+I VEL
Sbjct: 6   VLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYVDDHRSGKIVVEL 65

Query: 93  QGRINDCKALTYRQDLKARDIEAYRLNTLPTNQWGYVVISTPDGVLDHEEAIRKNVGGQV 152
            GR+N C  ++ R D+  ++IE +    LP+ Q+GY+V++T  G++DHEEA RKNVGG+V
Sbjct: 66  NGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKV 125

Query: 153 LGYFH 157
           LG+F+
Sbjct: 126 LGFFY 130


>AT1G07770.2 | Symbols: RPS15A | ribosomal protein S15A |
           chr1:2408413-2409065 REVERSE LENGTH=130
          Length = 130

 Score =  136 bits (343), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 62/125 (49%), Positives = 88/125 (70%)

Query: 33  ILNDALRTMVNAEKRGKAAVELSHISTVISSFLQIMKNRGYVKNFQVYDPHRVGRITVEL 92
           +LNDAL++M NAEKRGK  V +   S VI  FL +M+  GY+  F+  D HR G+I VEL
Sbjct: 6   VLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYVDDHRSGKIVVEL 65

Query: 93  QGRINDCKALTYRQDLKARDIEAYRLNTLPTNQWGYVVISTPDGVLDHEEAIRKNVGGQV 152
            GR+N C  ++ R D+  ++IE +    LP+ Q+GY+V++T  G++DHEEA RKNVGG+V
Sbjct: 66  NGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKV 125

Query: 153 LGYFH 157
           LG+F+
Sbjct: 126 LGFFY 130


>AT1G07770.1 | Symbols: RPS15A | ribosomal protein S15A |
           chr1:2408413-2409065 REVERSE LENGTH=130
          Length = 130

 Score =  136 bits (343), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 62/125 (49%), Positives = 88/125 (70%)

Query: 33  ILNDALRTMVNAEKRGKAAVELSHISTVISSFLQIMKNRGYVKNFQVYDPHRVGRITVEL 92
           +LNDAL++M NAEKRGK  V +   S VI  FL +M+  GY+  F+  D HR G+I VEL
Sbjct: 6   VLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYVDDHRSGKIVVEL 65

Query: 93  QGRINDCKALTYRQDLKARDIEAYRLNTLPTNQWGYVVISTPDGVLDHEEAIRKNVGGQV 152
            GR+N C  ++ R D+  ++IE +    LP+ Q+GY+V++T  G++DHEEA RKNVGG+V
Sbjct: 66  NGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKV 125

Query: 153 LGYFH 157
           LG+F+
Sbjct: 126 LGFFY 130


>AT2G39590.1 | Symbols:  | Ribosomal protein S8 family protein |
           chr2:16517588-16518265 REVERSE LENGTH=136
          Length = 136

 Score =  135 bits (341), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 60/125 (48%), Positives = 88/125 (70%)

Query: 33  ILNDALRTMVNAEKRGKAAVELSHISTVISSFLQIMKNRGYVKNFQVYDPHRVGRITVEL 92
           +LND L++M NAEK+GK  V +   S VI  FL +M+  GY+  F+  D HR G+I VEL
Sbjct: 12  VLNDCLKSMSNAEKQGKRQVMIRPSSKVIIKFLTVMQKHGYIAEFEYVDDHRSGKIVVEL 71

Query: 93  QGRINDCKALTYRQDLKARDIEAYRLNTLPTNQWGYVVISTPDGVLDHEEAIRKNVGGQV 152
            GR+N+C  ++ R DL  ++IE +    LP+ Q+GY+V++T  G++DHEEA +KNVGG+V
Sbjct: 72  NGRLNNCGVISPRYDLGVKEIEGWTAKLLPSRQFGYIVLTTSAGIMDHEEARKKNVGGKV 131

Query: 153 LGYFH 157
           LG+F+
Sbjct: 132 LGFFY 136


>AT3G46040.1 | Symbols: RPS15AD | ribosomal protein S15A D |
           chr3:16914891-16915529 FORWARD LENGTH=130
          Length = 130

 Score =  134 bits (336), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 60/125 (48%), Positives = 87/125 (69%)

Query: 33  ILNDALRTMVNAEKRGKAAVELSHISTVISSFLQIMKNRGYVKNFQVYDPHRVGRITVEL 92
           +LND L++M NAEKRGK  V +   S VI  FL +M+  GY+  F+  D HR G+I VEL
Sbjct: 6   VLNDGLKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYVDDHRSGKIVVEL 65

Query: 93  QGRINDCKALTYRQDLKARDIEAYRLNTLPTNQWGYVVISTPDGVLDHEEAIRKNVGGQV 152
            GR+N C  ++ R D+  ++IE +    LP+ Q+G++V++T  G++DHEEA RKNVGG+V
Sbjct: 66  NGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKNVGGKV 125

Query: 153 LGYFH 157
           LG+F+
Sbjct: 126 LGFFY 130