Miyakogusa Predicted Gene

Lj1g3v4763600.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4763600.1 CUFF.33164.1
         (597 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G54720.1 | Symbols: AMP1, COP2, HPT, PT, MFO1 | Peptidase M28...   672   0.0  
AT5G19740.1 | Symbols:  | Peptidase M28 family protein | chr5:66...   470   e-132
AT4G07670.1 | Symbols:  | protease-associated (PA) domain-contai...   188   1e-47
AT4G07670.2 | Symbols:  | protease-associated (PA) domain-contai...   181   9e-46

>AT3G54720.1 | Symbols: AMP1, COP2, HPT, PT, MFO1 | Peptidase M28
           family protein | chr3:20254852-20257815 REVERSE
           LENGTH=705
          Length = 705

 Score =  672 bits (1734), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 328/575 (57%), Positives = 424/575 (73%), Gaps = 17/575 (2%)

Query: 15  KPSPLSTWVVILVLCILGFYAVYFPRSNAPFPTPL-------NSSNLQTLFLSTSSNSTI 67
           +P PL +++ ++VL +  FY ++ P +  P   PL       N+  L+ LFLS++SN+TI
Sbjct: 21  QPPPLCSFLFVIVLFVATFYTLHHPDAVTP---PLLFSRNAYNALRLRRLFLSSASNATI 77

Query: 68  ASYLRALTLHPHLAGTEPAADTTRYVLSHFTSLGLQTHTATYRALLSYPLSSSLTAHFSD 127
           +SYLR LT HPHLAGT+P+ DT  YV +HF SLGL+TH A Y ALLSYP   S+TA FS+
Sbjct: 78  SSYLRELTRHPHLAGTKPSLDTLHYVFNHFQSLGLETHVAEYEALLSYPTHISVTASFSN 137

Query: 128 GSSVDLPLTEPAGGPGVVQPYHAYSPSGSVQARVVFVNYGREKDYREL---GVNVSGCIV 184
            ++++  L +  G   VV+PYHAYSPSGS Q  VVFVN+G E+DY  L   GV+V GC+V
Sbjct: 138 TTTLEFDLNDVPGDSPVVRPYHAYSPSGSAQGNVVFVNHGEERDYHALESIGVSVKGCVV 197

Query: 185 IARKGGEFGRGAVVETAEKNGAAAVLIYGDGETWRNG-FERGNVMRGIGDPLSPGWAXXX 243
           +ARKG   GRGA+V+ AE  GA  VLIY + +    G  ERG VMRGIGDP+SPGW    
Sbjct: 198 LARKGENLGRGAIVKIAEAKGALGVLIYAENDGGGFGGIERGTVMRGIGDPVSPGWPGVV 257

Query: 244 XXXXXXXXXXXXXKRFPKIPSMPLSAEVADSILSSLGGAPVPLEWRGALR-SKVSHVGPG 302
                        +RFPKIPS+PLS   A+ IL+SLGGA  PLEWR + R      VGPG
Sbjct: 258 GGEKLSLDDELVTRRFPKIPSLPLSLRNAEIILASLGGARAPLEWRNSGRVGPGQRVGPG 317

Query: 303 PTVLNFTYQGEKKMATIQNVFAVIKGSEEPDRYVLLGNHRDAWTYGAVDPSSGTAALLDI 362
             V+N T+QGE KM  I NV   I+GSEE DRYV+LGNHRDAWTYGAVDP+SGT+ALLDI
Sbjct: 318 RMVINMTFQGEMKMKKINNVVVTIRGSEEADRYVILGNHRDAWTYGAVDPNSGTSALLDI 377

Query: 363 ARRYSILLGLGWKPRRTIILCSWDAEEFGMIGSTEWVEQNLINLGSKTVAYLNVDCAVQG 422
           +RR+++LL  GW+PRRTI+LCSWDAEEFGMIGSTEW+E+N++NLG+  VAYLNVDCAVQG
Sbjct: 378 SRRFALLLKSGWRPRRTILLCSWDAEEFGMIGSTEWIEENVLNLGASAVAYLNVDCAVQG 437

Query: 423 PGFFVGSTPQLDSLILEVTKKVKDPDSEDVSVYESWAAADGGNNIQRLSGVDSDFASFVQ 482
            GFF G+TPQLD L+++V K V+DPD+  ++V E++ + +  N IQRLS VDSDF+ F+ 
Sbjct: 438 SGFFAGATPQLDGLLVDVLKLVQDPDAVGLTVEETFKSQN--NIIQRLSRVDSDFSGFLH 495

Query: 483 HAGIPSIDIYYGRDFPVYHTAFDSYNWMAEHGDPFFQRHVAVTGVWGLLALHLADDSILP 542
           HAGIPSID+YYG D+PVYHTAFDSY+WM  + DP F RHVA+ G+WGLL + LAD+ ++P
Sbjct: 496 HAGIPSIDMYYGADYPVYHTAFDSYDWMIHNADPLFHRHVAMAGIWGLLGILLADEPLIP 555

Query: 543 FNYVSYANELQLYNNRLSNLLDQKTSLHPLAMSIQ 577
           F+Y+SYA++LQ + ++LS LL+ K S++PL+M+IQ
Sbjct: 556 FDYISYADQLQAHRDKLSKLLEGKVSVNPLSMAIQ 590


>AT5G19740.1 | Symbols:  | Peptidase M28 family protein |
           chr5:6673986-6676767 FORWARD LENGTH=681
          Length = 681

 Score =  470 bits (1209), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 254/547 (46%), Positives = 338/547 (61%), Gaps = 39/547 (7%)

Query: 51  SSNLQTLFLSTS--SNSTIASYLRALTLHPHLAGTEPAADTTRYVLSHFTSLGLQTHTAT 108
            S+   LF+STS   N+++A  L  LT  PH+AGT   A+   YV S FTS  L++H   
Sbjct: 27  KSHYHELFISTSFSDNASVALNLHTLTRRPHVAGTVANAEAAEYVRSVFTSSALKSHVVA 86

Query: 109 YRALLSYPLSSSLTAHFSDGSS-VDLPLTEPAGGPG-----VVQPYHAYSPSGSVQARVV 162
           Y+  L+YP+  SL    +D +  +   L +   G       V+  +H Y+ SG+V   VV
Sbjct: 87  YQVSLTYPVHRSLVLTPTDSAKPITFLLEQEKLGDNPYANEVMPTFHGYAKSGNVSGPVV 146

Query: 163 FVNYGREKDY----RELGVNVSGCIVIARKGGEFGRGAVVETAEKNGAAAVLIYGD---- 214
           + NYGR +D+    +++GVNVSG +VIAR G +  RG +V+ A + GA  V+IY D    
Sbjct: 147 YANYGRVEDFVRLKKDMGVNVSGAVVIARYG-QIYRGDIVKNAYEAGAVGVVIYTDKRDY 205

Query: 215 -GETW--------RNGFERGNVMRGIGDPLSPGWAXXXXXXXXXXXXXXXXKRFPKIPSM 265
            G+ W         +G + G V  G+GDP +PGWA                   P IPS+
Sbjct: 206 GGDEWFPASKWMPPSGVQVGTVYNGLGDPTTPGWASVDGCERLSDEAVELSGDVPLIPSL 265

Query: 266 PLSAEVADSILSSLGGAPVPLEWRGALRSKVSHVGPGPTVLNFTYQGEKKMATIQNVFAV 325
           P+SA  A+ IL ++ G              V  VGPGP VLN +Y GE  +A I+NV  V
Sbjct: 266 PVSAADAEVILKTVVG--------DVSDGDVYPVGPGPGVLNLSYIGETVIAKIENVIGV 317

Query: 326 IKGSEEPDRYVLLGNHRDAWTYGAVDPSSGTAALLDIARRYSILLGLGWKPRRTIILCSW 385
           I+G EEPDRYV+LGNHRDAWT+GAVDP+SGTA L++IA+R   L   GWKPRRTIILC+W
Sbjct: 318 IEGEEEPDRYVILGNHRDAWTFGAVDPNSGTAVLMEIAQRLDKLQKRGWKPRRTIILCNW 377

Query: 386 DAEEFGMIGSTEWVEQNLINLGSKTVAYLNVDCAVQGPGFFVGSTPQLDSLILEVTKKVK 445
           DAEE+G+IGSTEWVE+N   L S+ VAYLNVDCAV GPGF   +TPQLD LI    ++V+
Sbjct: 378 DAEEYGLIGSTEWVEENREMLSSRAVAYLNVDCAVSGPGFHASATPQLDELIKVAAQEVR 437

Query: 446 DPDSEDVSVYESWAAADGGNNIQRLSGVDSDFASFVQHAGIPSIDIYYGRDFPVYHTAFD 505
           DPD+   ++YESW  +     I+RL G  SD+ASFVQH G+P +D+ +GR +PVYH+ +D
Sbjct: 438 DPDNATQTIYESWIGSSDSVVIRRLGGGGSDYASFVQHVGVPGVDMSFGRGYPVYHSMYD 497

Query: 506 SYNWMAEHGDPFFQRHVAVTGVWGLLALHLADDSILPFNYVSYANELQ-----LYNNRLS 560
            + WM + GDP FQRHVA+  V GL+AL LAD+ I+PFNY SYA EL+     L N +L 
Sbjct: 498 DFTWMEKFGDPMFQRHVAMASVLGLVALRLADEEIIPFNYTSYALELKKSAEDLENEKLG 557

Query: 561 NLLDQKT 567
           + +D  T
Sbjct: 558 HNIDVST 564


>AT4G07670.1 | Symbols:  | protease-associated (PA)
           domain-containing protein | chr4:4462911-4464256 FORWARD
           LENGTH=280
          Length = 280

 Score =  188 bits (477), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 111/260 (42%), Positives = 147/260 (56%), Gaps = 46/260 (17%)

Query: 161 VVFVNYGREKDY----RELGVNVSGCIVIARKGGEFGRGAVVETAEKNGAAAVLIYGD-- 214
           VV+ NYGR +D+    +++GVNVSG +VIAR G +  +  +V  A + GA  V+IY +  
Sbjct: 10  VVYANYGRVEDFVRLKKDMGVNVSGAVVIARYG-QIYKVDIVNNAYEAGAVGVVIYTNKR 68

Query: 215 ---GETWR--------NGFERGNVMRGIGDPLSPGWAXXXXXXXXXXXXXXXXKRFPKIP 263
              G+ W         +GF+ G V  G+GDP +PGWA                   P IP
Sbjct: 69  DYGGDEWFPASKWMPPSGFQVGTVYNGLGDPTTPGWASVDGCERLSDEAVELSGDVPLIP 128

Query: 264 SMPLSAEVADSILSSLGGAPVPLEWRGALRSKVSHVGPGPTVLNFTYQGEKKMATIQNVF 323
           S+P+SA  A+ IL ++                V  VGPGP +LN +Y   K    IQNV 
Sbjct: 129 SLPVSAADAEVILKTI----------------VGDVGPGPGILNLSYIVTK----IQNVI 168

Query: 324 AVIKGSEEPDRYVLLGNHRDAWTYGAVDPSSGTAALLD--------IARRYSILLGLGWK 375
            VI+G EEPDRYV+L NHRD WT+ AVDP+SGTA L++        IA+R   L   GWK
Sbjct: 169 GVIEGEEEPDRYVILRNHRDTWTFRAVDPNSGTAVLMEASKSYLQHIAQRLDKLQKRGWK 228

Query: 376 PRRTIILCSWDAEEFGMIGS 395
           PRRTIILC+WDAEE+G++ S
Sbjct: 229 PRRTIILCNWDAEEYGLVSS 248


>AT4G07670.2 | Symbols:  | protease-associated (PA)
           domain-containing protein | chr4:4462992-4464256 FORWARD
           LENGTH=245
          Length = 245

 Score =  181 bits (460), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 103/234 (44%), Positives = 135/234 (57%), Gaps = 34/234 (14%)

Query: 175 LGVNVSGCIVIARKGGEFGRGAVVETAEKNGAAAVLIYGD-----GETW--------RNG 221
           +GVNVSG +VIAR G +  +  +V  A + GA  V+IY +     G+ W         +G
Sbjct: 1   MGVNVSGAVVIARYG-QIYKVDIVNNAYEAGAVGVVIYTNKRDYGGDEWFPASKWMPPSG 59

Query: 222 FERGNVMRGIGDPLSPGWAXXXXXXXXXXXXXXXXKRFPKIPSMPLSAEVADSILSSLGG 281
           F+ G V  G+GDP +PGWA                   P IPS+P+SA  A+ IL ++  
Sbjct: 60  FQVGTVYNGLGDPTTPGWASVDGCERLSDEAVELSGDVPLIPSLPVSAADAEVILKTI-- 117

Query: 282 APVPLEWRGALRSKVSHVGPGPTVLNFTYQGEKKMATIQNVFAVIKGSEEPDRYVLLGNH 341
                         V  VGPGP +LN +Y     +  IQNV  VI+G EEPDRYV+L NH
Sbjct: 118 --------------VGDVGPGPGILNLSY----IVTKIQNVIGVIEGEEEPDRYVILRNH 159

Query: 342 RDAWTYGAVDPSSGTAALLDIARRYSILLGLGWKPRRTIILCSWDAEEFGMIGS 395
           RD WT+ AVDP+SGTA L++IA+R   L   GWKPRRTIILC+WDAEE+G++ S
Sbjct: 160 RDTWTFRAVDPNSGTAVLMEIAQRLDKLQKRGWKPRRTIILCNWDAEEYGLVSS 213