Miyakogusa Predicted Gene
- Lj1g3v4753250.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v4753250.1 tr|F4QAI2|F4QAI2_DICFS Transcription factor
jumonji OS=Dictyostelium fasciculatum (strain SH3)
GN=jc,39.09,1e-17,Clavaminate synthase-like,NULL; F-box domain,F-box
domain, cyclin-like; TRANSCRIPTION FACTOR JUMONJI,CUFF.33131.1
(524 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G06550.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Transcript... 699 0.0
AT1G78280.1 | Symbols: | transferases, transferring glycosyl gr... 251 7e-67
AT5G63080.1 | Symbols: | 2-oxoglutarate (2OG) and Fe(II)-depend... 94 2e-19
AT3G20810.2 | Symbols: JMJD5 | 2-oxoglutarate (2OG) and Fe(II)-d... 60 4e-09
AT3G20810.1 | Symbols: JMJD5 | 2-oxoglutarate (2OG) and Fe(II)-d... 60 5e-09
AT3G20810.3 | Symbols: JMJD5 | 2-oxoglutarate (2OG) and Fe(II)-d... 56 8e-08
AT5G19840.2 | Symbols: | 2-oxoglutarate (2OG) and Fe(II)-depend... 55 1e-07
AT5G19840.1 | Symbols: | 2-oxoglutarate (2OG) and Fe(II)-depend... 52 7e-07
>AT5G06550.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Transcription
factor jumonji/aspartyl beta-hydroxylase
(InterPro:IPR003347), F-box domain, Skp2-like
(InterPro:IPR022364), Transcription factor jumonji
(InterPro:IPR013129); BEST Arabidopsis thaliana protein
match is: transferases, transferring glycosyl groups
(TAIR:AT1G78280.1); Has 1762 Blast hits to 1747 proteins
in 292 species: Archae - 0; Bacteria - 297; Metazoa -
877; Fungi - 168; Plants - 221; Viruses - 0; Other
Eukaryotes - 199 (source: NCBI BLink). |
chr5:2001246-2003068 REVERSE LENGTH=502
Length = 502
Score = 699 bits (1804), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/459 (72%), Positives = 376/459 (81%), Gaps = 4/459 (0%)
Query: 67 FSIKSSAPSHTHGVQPLGNLYFNPGSTNSRNTGLGNLRTLTDELVLEILGFLDATSLGVL 126
F +K +APS HGVQPLGNLYFNPG+ N RNTGLGNL+ L+DELVL+ILG L A LGVL
Sbjct: 47 FKLKIAAPSQEHGVQPLGNLYFNPGAVNVRNTGLGNLQILSDELVLDILGLLGANHLGVL 106
Query: 127 ASVSKSFYVFTNHEPLWRNLVLENLLGGFQFNGSWKSTYVAACYPSFDISVSALGGFKVR 186
A+V+KSFY+F NHEPLWRNLVLE L G F FNGSW+STYVAA +P F + K+
Sbjct: 107 ATVTKSFYIFANHEPLWRNLVLEELKGDFLFNGSWRSTYVAAYHPKFKFAGDGESNLKII 166
Query: 187 DFYSDYLFQSWLCANLEMKPEWLERDNIVRKRGISVEEFVLKFEEPNKPVLLEGCIDNWD 246
DFYSDYLFQSWLCANLEMKP+WL RDNI R RGISVE+F+ KFEEPNKPVLLEGC+D W
Sbjct: 167 DFYSDYLFQSWLCANLEMKPKWLRRDNITRVRGISVEDFITKFEEPNKPVLLEGCLDGWP 226
Query: 247 ALKNWDRDYLVDLCGDVKFSVGPVEMKLVEYFGYSDQVREERPLYLFDPKFAEKVPKFGS 306
A++ W RDYL + GDV+F+VGPVEMKL +YF YSD REERPLYLFDPKFAEKVP S
Sbjct: 227 AIEKWSRDYLTKVVGDVEFAVGPVEMKLEKYFRYSDGAREERPLYLFDPKFAEKVPVLDS 286
Query: 307 EYEVPVYFQEDLFGVLGNDRPDYRWIIMGPAGSGSSFHVDPNSTSAWNAVIKGSKKWILF 366
EY+VPVYF+EDLFGVLGN+RPDYRWII+GPAGSGSSFH+DPNSTSAWNAVI GSKKW+LF
Sbjct: 287 EYDVPVYFREDLFGVLGNERPDYRWIIIGPAGSGSSFHIDPNSTSAWNAVITGSKKWVLF 346
Query: 367 PPDVIPPGVHPSPDGAEVASPVSIMEWFMNFYGATKSWKKRPIECICKAGEVIFVPNGWW 426
PPDV+PPGVHPSPDGAEVA PVSI+EWFMNFY TK W+K+PIECICKAGEV+FVPNGWW
Sbjct: 347 PPDVVPPGVHPSPDGAEVACPVSIIEWFMNFYDDTKDWEKKPIECICKAGEVMFVPNGWW 406
Query: 427 HLVINLEESIAITQNYVSRRNLLNVLDFLKRPNACTLVSGTRDRVNLYDKFKNAIEASFP 486
HLVINLEESIAITQNY SR NLLNVL+FLK+PNA LVSGT DR NL+DKFK AIE ++P
Sbjct: 407 HLVINLEESIAITQNYASRSNLLNVLEFLKKPNAKELVSGTTDRENLHDKFKKAIEEAYP 466
Query: 487 GEIDELTXXXXXXX-XXXXXLSYWDSVTDPSMGAFKFSF 524
G I EL +S+WDS FKFSF
Sbjct: 467 GTIQELEKKAEEAKRAEEQRVSFWDSA---KTDTFKFSF 502
>AT1G78280.1 | Symbols: | transferases, transferring glycosyl
groups | chr1:29452823-29457118 FORWARD LENGTH=943
Length = 943
Score = 251 bits (642), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 138/369 (37%), Positives = 204/369 (55%), Gaps = 16/369 (4%)
Query: 91 GSTNSRNTGLGNLRTLTDELVLEILGFLDATSLGVLASVSKSFYVFTNHEPLWRNLVLEN 150
G + R LG+L L DE + +L +L + LA VS Y+ N EPLW +L L
Sbjct: 5 GQRDRRPDALGSLSVLPDETICVLLEYLAPRDIAHLACVSSVMYILCNEEPLWMSLCLRR 64
Query: 151 LLGGFQFNGSWKST--YVAACYPSFDISVSALGGFKVRDFYSDYLFQSWLCANLEMKPEW 208
G ++ GSWK T ++ D F F S YL++ + N +
Sbjct: 65 AKGPLEYKGSWKKTTLHLEGVTQENDAYRKC---FHFDGFMSLYLYKRFYRCNTSLDGFS 121
Query: 209 LERDNIVRKRGISVEEFVLKFEEPNKPVLLEGCIDNWDALKNWDRDYLVDLCGDVKFSVG 268
+ N+ R+R IS++EF +++ KPVLL G D+W A W D L + G+V F +
Sbjct: 122 FDNGNVERRRNISLDEFSKEYD-AKKPVLLSGLADSWPASNTWTIDQLSEKYGEVPFRIS 180
Query: 269 -----PVEMKLVEYFGYSDQVREERPLYLFDPKFAEKVPKFGSEYEVPVYFQEDLFGVLG 323
+ MK +Y Y R+E PLY+FD KF E P+ +Y VP FQED F +L
Sbjct: 181 QRSPNKISMKFKDYIAYMKTQRDEDPLYVFDDKFGEAAPELLKDYSVPHLFQEDWFEILD 240
Query: 324 ND-RPDYRWIIMGPAGSGSSFHVDPNSTSAWNAVIKGSKKWILFPPDVIPPG--VHPSPD 380
+ RP YRW+I+GP SG+S+HVDP TSAWN ++ G K+W L+PP +P G VH + D
Sbjct: 241 KESRPPYRWLIVGPERSGASWHVDPALTSAWNTLLCGRKRWALYPPGKVPLGVTVHVNED 300
Query: 381 GAEVASPV-SIMEWFMNFYGATKSWKKRPIECICKAGEVIFVPNGWWHLVINLEESIAIT 439
+V+ S ++W++++Y + +PIEC GE I+VP+GWWH ++NLE ++A+T
Sbjct: 301 DGDVSIDTPSSLQWWLDYYPLLAD-EDKPIECTLLPGETIYVPSGWWHCILNLEPTVAVT 359
Query: 440 QNYVSRRNL 448
QN+V++ N
Sbjct: 360 QNFVNKENF 368
>AT5G63080.1 | Symbols: | 2-oxoglutarate (2OG) and Fe(II)-dependent
oxygenase superfamily protein | chr5:25300026-25302321
REVERSE LENGTH=462
Length = 462
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 128/283 (45%), Gaps = 53/283 (18%)
Query: 215 VRKRGISVEEFVLKFEEPNKPVLLEGCIDNWDALKNW------------------DRDYL 256
+ + +S +F ++ N+PV++ ++W A ++W R +
Sbjct: 12 INGKELSYGDFAERYLAKNQPVVISDLTEDWRAREDWVSENGNPNLHVFATHFGKSRVQV 71
Query: 257 VDLCGDVKFS-VGPVEM---KLVEYFGYSDQVREERPLYLFDPKFAEKVPKFGSEYEVPV 312
D C +F+ +EM + VE + D + EE LYL D F ++ P + + Y+ P
Sbjct: 72 AD-CDTREFTDQKRLEMSVTEFVEQWTNKDSI-EESVLYLKDWHFVKEYPDYTA-YQTPP 128
Query: 313 YFQEDLFGV------LGNDR-----------PDYRWIIMGPAGSGSSFHVDPNSTSAWNA 355
F +D V + DR DYR++ MG GS + H D + +W+A
Sbjct: 129 LFSDDWLNVYLDNYQMHEDRDSFQKYDQISCSDYRFVYMGGKGSWTPLHADVFRSYSWSA 188
Query: 356 VIKGSKKWILFPPDVIPPGVHPSPDGAEVASPVSIMEWF--MNFYGATKS-WKKRPIECI 412
+ G K+W+ PP P H D I E F G K+ W +ECI
Sbjct: 189 NVCGKKRWLFLPP----PQSHLVYDRYMKNCVYDIFEEVNETKFPGFKKTTW----LECI 240
Query: 413 CKAGEVIFVPNGWWHLVINLEESIAITQNYVSRRNLLNVLDFL 455
+ GE+IFVP+GW H V NLE++I+I N+++ NL V D L
Sbjct: 241 QEPGEIIFVPSGWHHQVYNLEDTISINHNWLNAYNLSWVWDLL 283
>AT3G20810.2 | Symbols: JMJD5 | 2-oxoglutarate (2OG) and
Fe(II)-dependent oxygenase superfamily protein |
chr3:7275814-7278144 FORWARD LENGTH=429
Length = 429
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 110/243 (45%), Gaps = 30/243 (12%)
Query: 214 IVRKRGISVEEFVLKFEEPNKPVLLEGCIDNWDALKNWDR-DYLVDLCGDVKFSVGPVEM 272
+ ++ G+S+E F+ + P PV++ + +W A W+ DYL + G+ PVE+
Sbjct: 188 VEKRSGLSLEGFLRDYYLPGTPVVITNSMAHWPARTKWNHLDYLNAVAGNRTV---PVEV 244
Query: 273 KLVEYFGYSDQVREERPLYLFDPKFAEKVPKFGSEYEVPVYF-QEDLFGVLGNDR----- 326
+ + SD +E L F KF E++ S P Y Q LF + R
Sbjct: 245 G--KNYLCSDWKQE---LVTFS-KFLERMRTNKSSPMEPTYLAQHPLFDQINELRDDICI 298
Query: 327 PDYRWI----------IMGPAGSGSSFHVDPNSTSAWNAVIKGSKKWILFPPDVIPPGVH 376
PDY ++ GPAG+ + H DP+ V KK+I P + ++
Sbjct: 299 PDYCFVGGGELQSLNAWFGPAGTVTPLHHDPHHNILAQVV---GKKYIRLYPSFLQDELY 355
Query: 377 PSPDGAEVASPVSIMEWFMNFYGATKSWKKRPIECICKAGEVIFVPNGWWHLVINLEESI 436
P + S ++ ++ K+ + ++CI + GE++++P WWH V +L S+
Sbjct: 356 PYSETMLCNSSQVDLD-NIDETEFPKAMELEFMDCILEEGEMLYIPPKWWHYVRSLTMSL 414
Query: 437 AIT 439
+++
Sbjct: 415 SVS 417
>AT3G20810.1 | Symbols: JMJD5 | 2-oxoglutarate (2OG) and
Fe(II)-dependent oxygenase superfamily protein |
chr3:7275814-7278144 FORWARD LENGTH=418
Length = 418
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 110/243 (45%), Gaps = 30/243 (12%)
Query: 214 IVRKRGISVEEFVLKFEEPNKPVLLEGCIDNWDALKNWDR-DYLVDLCGDVKFSVGPVEM 272
+ ++ G+S+E F+ + P PV++ + +W A W+ DYL + G+ PVE+
Sbjct: 177 VEKRSGLSLEGFLRDYYLPGTPVVITNSMAHWPARTKWNHLDYLNAVAGNRTV---PVEV 233
Query: 273 KLVEYFGYSDQVREERPLYLFDPKFAEKVPKFGSEYEVPVYF-QEDLFGVLGNDR----- 326
+ + SD +E L F KF E++ S P Y Q LF + R
Sbjct: 234 G--KNYLCSDWKQE---LVTFS-KFLERMRTNKSSPMEPTYLAQHPLFDQINELRDDICI 287
Query: 327 PDYRWI----------IMGPAGSGSSFHVDPNSTSAWNAVIKGSKKWILFPPDVIPPGVH 376
PDY ++ GPAG+ + H DP+ V KK+I P + ++
Sbjct: 288 PDYCFVGGGELQSLNAWFGPAGTVTPLHHDPHHNILAQVV---GKKYIRLYPSFLQDELY 344
Query: 377 PSPDGAEVASPVSIMEWFMNFYGATKSWKKRPIECICKAGEVIFVPNGWWHLVINLEESI 436
P + S ++ ++ K+ + ++CI + GE++++P WWH V +L S+
Sbjct: 345 PYSETMLCNSSQVDLD-NIDETEFPKAMELEFMDCILEEGEMLYIPPKWWHYVRSLTMSL 403
Query: 437 AIT 439
+++
Sbjct: 404 SVS 406
>AT3G20810.3 | Symbols: JMJD5 | 2-oxoglutarate (2OG) and
Fe(II)-dependent oxygenase superfamily protein |
chr3:7275814-7278182 FORWARD LENGTH=398
Length = 398
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 103/233 (44%), Gaps = 30/233 (12%)
Query: 214 IVRKRGISVEEFVLKFEEPNKPVLLEGCIDNWDALKNWDR-DYLVDLCGDVKFSVGPVEM 272
+ ++ G+S+E F+ + P PV++ + +W A W+ DYL + G+ PVE+
Sbjct: 177 VEKRSGLSLEGFLRDYYLPGTPVVITNSMAHWPARTKWNHLDYLNAVAGNRTV---PVEV 233
Query: 273 KLVEYFGYSDQVREERPLYLFDPKFAEKVPKFGSEYEVPVYF-QEDLFGVLGNDR----- 326
+ + SD +E L F KF E++ S P Y Q LF + R
Sbjct: 234 G--KNYLCSDWKQE---LVTFS-KFLERMRTNKSSPMEPTYLAQHPLFDQINELRDDICI 287
Query: 327 PDYRWII----------MGPAGSGSSFHVDPNSTSAWNAVIKGSKKWILFPPDVIPPGVH 376
PDY ++ GPAG+ + H DP+ V KK+I P + ++
Sbjct: 288 PDYCFVGGGELQSLNAWFGPAGTVTPLHHDPHHNILAQVV---GKKYIRLYPSFLQDELY 344
Query: 377 PSPDGAEVASPVSIMEWFMNFYGATKSWKKRPIECICKAGEVIFVPNGWWHLV 429
P + S ++ ++ K+ + ++CI + GE++++P WWH V
Sbjct: 345 PYSETMLCNSSQVDLD-NIDETEFPKAMELEFMDCILEEGEMLYIPPKWWHYV 396
>AT5G19840.2 | Symbols: | 2-oxoglutarate (2OG) and Fe(II)-dependent
oxygenase superfamily protein | chr5:6705372-6709063
FORWARD LENGTH=549
Length = 549
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 119/302 (39%), Gaps = 60/302 (19%)
Query: 217 KRGISVEEFVLKFEEPNKPVLLEGCIDNWDALKNWD-----RDYLVDLCGDVKF------ 265
+ ++ +F E N P + GC WDA W+ DYL + G V+
Sbjct: 14 ENALTAADFESTVELTNFPAVFRGCASVWDAYSKWNPFNSGLDYLEERAGSVEVEAMLSR 73
Query: 266 ----------SVGPVEMKLVEYFGYSDQ-VREERPLYLFDPKFAEKVPKFGSEYEVPVYF 314
S V + ++ + Q +R + D K A+ P +Y
Sbjct: 74 TAPVFNGDIRSHERVSLPFSDFIRFCKQHMRGKGNGSGVDAKSADLNPMCEDYRPGQIYL 133
Query: 315 QEDLFGVLGNDRPD------YRWIIMGP-----------------AGSGSSFHVDPNSTS 351
+ F +L +++ + R I P A + SS H DP+
Sbjct: 134 AQ--FPILNDEKEEKVLLKILRQDIQTPTFLDAKSLSSINFWMNSAEARSSTHYDPHHN- 190
Query: 352 AWNAVIKGSKKWILFPPDVIPPGVHPSPDGAEVA--SPVSIMEWFMNFYGATKSWKKRPI 409
V+ G KK +L+PP P ++P P E + S V + ++ Y + K+
Sbjct: 191 -LLCVVSGRKKVVLWPPSA-SPSLYPMPIYGEASNHSSVGLENPNLSDYPRAEHSLKQSQ 248
Query: 410 ECICKAGEVIFVPNGWWHLVINLEESIAIT----QNYVSRRNLLNVLD--FLKRPNACTL 463
E AG+ +F+P GW+H V + E ++A+ NY+S N+ +D +L+R L
Sbjct: 249 EITLNAGDAVFIPEGWFHQVDSDELTVAVNFWWQSNYMS--NMPEHMDSYYLRRITRSLL 306
Query: 464 VS 465
VS
Sbjct: 307 VS 308
>AT5G19840.1 | Symbols: | 2-oxoglutarate (2OG) and Fe(II)-dependent
oxygenase superfamily protein | chr5:6705372-6709382
FORWARD LENGTH=505
Length = 505
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 108/279 (38%), Gaps = 56/279 (20%)
Query: 217 KRGISVEEFVLKFEEPNKPVLLEGCIDNWDALKNWD-----RDYLVDLCGDVKF------ 265
+ ++ +F E N P + GC WDA W+ DYL + G V+
Sbjct: 14 ENALTAADFESTVELTNFPAVFRGCASVWDAYSKWNPFNSGLDYLEERAGSVEVEAMLSR 73
Query: 266 ----------SVGPVEMKLVEYFGYSDQ-VREERPLYLFDPKFAEKVPKFGSEYEVPVYF 314
S V + ++ + Q +R + D K A+ P +Y
Sbjct: 74 TAPVFNGDIRSHERVSLPFSDFIRFCKQHMRGKGNGSGVDAKSADLNPMCEDYRPGQIYL 133
Query: 315 QEDLFGVLGNDRPD------YRWIIMGP-----------------AGSGSSFHVDPNSTS 351
+ F +L +++ + R I P A + SS H DP+
Sbjct: 134 AQ--FPILNDEKEEKVLLKILRQDIQTPTFLDAKSLSSINFWMNSAEARSSTHYDPHHNL 191
Query: 352 AWNAVIKGSKKWILFPPDVIPPGVHPSPDGAEVA--SPVSIMEWFMNFYGATKSWKKRPI 409
V+ G KK +L+PP P ++P P E + S V + ++ Y + K+
Sbjct: 192 L--CVVSGRKKVVLWPPSA-SPSLYPMPIYGEASNHSSVGLENPNLSDYPRAEHSLKQSQ 248
Query: 410 ECICKAGEVIFVPNGWWHLVINLEESIAIT----QNYVS 444
E AG+ +F+P GW+H V + E ++A+ NY+S
Sbjct: 249 EITLNAGDAVFIPEGWFHQVDSDELTVAVNFWWQSNYMS 287