Miyakogusa Predicted Gene

Lj1g3v4753230.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4753230.1 Non Chatacterized Hit- tr|E1Z2C1|E1Z2C1_CHLVA
Putative uncharacterized protein OS=Chlorella
variabil,27.04,6e-18,DOWNSTREAM NEIGHBOR OF SON,Donson; DONSON,Donson;
seg,NULL,CUFF.33126.1
         (621 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G54750.3 | Symbols:  | unknown protein; FUNCTIONS IN: molecul...   485   e-137
AT3G54750.1 | Symbols:  | unknown protein; Has 145 Blast hits to...   481   e-136
AT3G54750.2 | Symbols:  | unknown protein; Has 145 Blast hits to...   481   e-136

>AT3G54750.3 | Symbols:  | unknown protein; FUNCTIONS IN:
           molecular_function unknown; INVOLVED IN:
           biological_process unknown; LOCATED IN:
           cellular_component unknown; EXPRESSED IN: 24 plant
           structures; EXPRESSED DURING: 15 growth stages. |
           chr3:20264833-20268416 REVERSE LENGTH=590
          Length = 590

 Score =  485 bits (1248), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 280/615 (45%), Positives = 370/615 (60%), Gaps = 51/615 (8%)

Query: 27  MVKRKTPSELRGEQLKRASAVDLTDESPSSLAGSSNAAEVGNGFRKPGSFKPPRYTETRL 86
           + KRKTPSELRGEQLKR + VD   E+  +L    ++AE  NGF+K    K P+Y E R+
Sbjct: 5   VAKRKTPSELRGEQLKRTAFVDQAKEAFDALRPCKSSAERENGFKKSELSKNPKYIEMRM 64

Query: 87  DEVFTAKKSRFRVVSVKENAKENQTMEKTSTLKNMSLFSTLEAKRPQGASCLESSGTSTE 146
           DE++  KK+R  ++S KEN+KEN   +++S+L N+SL S L A + Q     E +  STE
Sbjct: 65  DELYPVKKARPWMLSGKENSKENGA-KQSSSLINVSLLSNLAATKRQLIR--EENNASTE 121

Query: 147 ARIDGPLQACQTNEKCGQGKFLSVSELSQAADKSSGLAASIDMGKALRGLAAFEPQV--- 203
              D   +A QTNE+C Q  F SV++LS   ++ S L   IDM KAL+GLA  EP +   
Sbjct: 122 VPDDTKAEARQTNERCSQSIFRSVTQLSTRGEELSCLP-DIDMNKALKGLATCEPLLVHP 180

Query: 204 -DNGLADDSSERHGELKSSINGSFFSECHVPGQKAPLDLTLKTSMRIVSSSSVNW---SV 259
            D    DD++        S++GSF SE  V GQK PLDL+LKT  R+VSSS ++W   S+
Sbjct: 181 GDITGEDDTA--------SLSGSFMSEFQVSGQKIPLDLSLKTYARLVSSSPLSWLHRSI 232

Query: 260 MRGT---MSQPAFQQCPIKSPNTRGSQGFKV---------LHSWLYPQXXXXXXXXXXXX 307
           M  T   M Q     C + + +     G  V         LHSW+YPQ            
Sbjct: 233 MGSTYNGMPQLKSLSCNVVNQDNSSGSGASVVSQVLNSMSLHSWVYPQSTLPPFVISAMV 292

Query: 308 XXTAD-AELEFLKKRQVAWEESFRDLYYMLRKNICGLFYVCTSQFVVMFTGGDSTGRSKC 366
              +D  E++FL+KR++AWE++FR LY+M RKN+C +FYVCTSQFV MFTG   +G +K 
Sbjct: 293 ASVSDRGEVDFLQKRKLAWEDAFRSLYFMFRKNLCKVFYVCTSQFVAMFTGSCESGGAKR 352

Query: 367 SCNAYISQSTIGLRSLLKEHDLCFSMPLCHSKVEQAATEDLVELSEIEKQNLGQTRRIRS 426
           SCN YI+QST  LR++LK  D+C+SMPLC +K++Q   EDL ELSE+E  N+GQ RR RS
Sbjct: 353 SCNGYITQSTRRLRAMLKNLDICYSMPLCKTKMDQTTVEDLAELSELENHNIGQIRRSRS 412

Query: 427 FSDIDNSPQSLLVFSGNNNVHGLYDFLLNYRTLLTSLSGVDVPVLCSPVPFQNSALSSPD 486
            S+IDN+P+S L F GN +VHGLYD LLNYR     L   DVPVL SPVPFQN+ALSSP+
Sbjct: 413 VSNIDNTPESFLAFVGNESVHGLYDLLLNYRYSFEFLPTADVPVLSSPVPFQNAALSSPE 472

Query: 487 IKCMETRRAEHFGASYNESIGKDGESAPDGLCYSIEIKDALLPPWIICGMCALIGSEGRS 546
           IKC E  + EH                    CY +EIK   +PPWII  +CA +G+ G++
Sbjct: 473 IKCSEMVKTEHTS------------------CYMVEIKGEYIPPWIISNICANVGANGQN 514

Query: 547 FEASFVAEPSSIGLNVALKPTCXXXXXXXXXXXXLEDCSDTFG-IPEAVVTSSMWSCSVK 605
           FEASFV EP+S+ LN+ L                  + +D    IP +V+   + S  +K
Sbjct: 515 FEASFVTEPTSVNLNIGLPQVPEKTDPESRVIEGTGETNDNASDIPGSVICPQLQSGHLK 574

Query: 606 SLKYCNASYTASLSP 620
           +LKYCN SYT SLSP
Sbjct: 575 NLKYCNKSYTVSLSP 589


>AT3G54750.1 | Symbols:  | unknown protein; Has 145 Blast hits to
           145 proteins in 60 species: Archae - 0; Bacteria - 0;
           Metazoa - 99; Fungi - 0; Plants - 40; Viruses - 0; Other
           Eukaryotes - 6 (source: NCBI BLink). |
           chr3:20264833-20268416 REVERSE LENGTH=589
          Length = 589

 Score =  481 bits (1238), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 280/615 (45%), Positives = 369/615 (60%), Gaps = 52/615 (8%)

Query: 27  MVKRKTPSELRGEQLKRASAVDLTDESPSSLAGSSNAAEVGNGFRKPGSFKPPRYTETRL 86
           + KRKTPSELRGEQLKR + VD   E+  +L     +AE  NGF+K    K P+Y E R+
Sbjct: 5   VAKRKTPSELRGEQLKRTAFVDQAKEAFDALR-PCKSAERENGFKKSELSKNPKYIEMRM 63

Query: 87  DEVFTAKKSRFRVVSVKENAKENQTMEKTSTLKNMSLFSTLEAKRPQGASCLESSGTSTE 146
           DE++  KK+R  ++S KEN+KEN   +++S+L N+SL S L A + Q     E +  STE
Sbjct: 64  DELYPVKKARPWMLSGKENSKENGA-KQSSSLINVSLLSNLAATKRQLIR--EENNASTE 120

Query: 147 ARIDGPLQACQTNEKCGQGKFLSVSELSQAADKSSGLAASIDMGKALRGLAAFEPQV--- 203
              D   +A QTNE+C Q  F SV++LS   ++ S L   IDM KAL+GLA  EP +   
Sbjct: 121 VPDDTKAEARQTNERCSQSIFRSVTQLSTRGEELSCLP-DIDMNKALKGLATCEPLLVHP 179

Query: 204 -DNGLADDSSERHGELKSSINGSFFSECHVPGQKAPLDLTLKTSMRIVSSSSVNW---SV 259
            D    DD++        S++GSF SE  V GQK PLDL+LKT  R+VSSS ++W   S+
Sbjct: 180 GDITGEDDTA--------SLSGSFMSEFQVSGQKIPLDLSLKTYARLVSSSPLSWLHRSI 231

Query: 260 MRGT---MSQPAFQQCPIKSPNTRGSQGFKV---------LHSWLYPQXXXXXXXXXXXX 307
           M  T   M Q     C + + +     G  V         LHSW+YPQ            
Sbjct: 232 MGSTYNGMPQLKSLSCNVVNQDNSSGSGASVVSQVLNSMSLHSWVYPQSTLPPFVISAMV 291

Query: 308 XXTAD-AELEFLKKRQVAWEESFRDLYYMLRKNICGLFYVCTSQFVVMFTGGDSTGRSKC 366
              +D  E++FL+KR++AWE++FR LY+M RKN+C +FYVCTSQFV MFTG   +G +K 
Sbjct: 292 ASVSDRGEVDFLQKRKLAWEDAFRSLYFMFRKNLCKVFYVCTSQFVAMFTGSCESGGAKR 351

Query: 367 SCNAYISQSTIGLRSLLKEHDLCFSMPLCHSKVEQAATEDLVELSEIEKQNLGQTRRIRS 426
           SCN YI+QST  LR++LK  D+C+SMPLC +K++Q   EDL ELSE+E  N+GQ RR RS
Sbjct: 352 SCNGYITQSTRRLRAMLKNLDICYSMPLCKTKMDQTTVEDLAELSELENHNIGQIRRSRS 411

Query: 427 FSDIDNSPQSLLVFSGNNNVHGLYDFLLNYRTLLTSLSGVDVPVLCSPVPFQNSALSSPD 486
            S+IDN+P+S L F GN +VHGLYD LLNYR     L   DVPVL SPVPFQN+ALSSP+
Sbjct: 412 VSNIDNTPESFLAFVGNESVHGLYDLLLNYRYSFEFLPTADVPVLSSPVPFQNAALSSPE 471

Query: 487 IKCMETRRAEHFGASYNESIGKDGESAPDGLCYSIEIKDALLPPWIICGMCALIGSEGRS 546
           IKC E  + EH                    CY +EIK   +PPWII  +CA +G+ G++
Sbjct: 472 IKCSEMVKTEHTS------------------CYMVEIKGEYIPPWIISNICANVGANGQN 513

Query: 547 FEASFVAEPSSIGLNVALKPTCXXXXXXXXXXXXLEDCSDTFG-IPEAVVTSSMWSCSVK 605
           FEASFV EP+S+ LN+ L                  + +D    IP +V+   + S  +K
Sbjct: 514 FEASFVTEPTSVNLNIGLPQVPEKTDPESRVIEGTGETNDNASDIPGSVICPQLQSGHLK 573

Query: 606 SLKYCNASYTASLSP 620
           +LKYCN SYT SLSP
Sbjct: 574 NLKYCNKSYTVSLSP 588


>AT3G54750.2 | Symbols:  | unknown protein; Has 145 Blast hits to
           145 proteins in 60 species: Archae - 0; Bacteria - 0;
           Metazoa - 99; Fungi - 0; Plants - 40; Viruses - 0; Other
           Eukaryotes - 6 (source: NCBI BLink). |
           chr3:20264833-20268416 REVERSE LENGTH=589
          Length = 589

 Score =  481 bits (1238), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 280/615 (45%), Positives = 369/615 (60%), Gaps = 52/615 (8%)

Query: 27  MVKRKTPSELRGEQLKRASAVDLTDESPSSLAGSSNAAEVGNGFRKPGSFKPPRYTETRL 86
           + KRKTPSELRGEQLKR + VD   E+  +L     +AE  NGF+K    K P+Y E R+
Sbjct: 5   VAKRKTPSELRGEQLKRTAFVDQAKEAFDALR-PCKSAERENGFKKSELSKNPKYIEMRM 63

Query: 87  DEVFTAKKSRFRVVSVKENAKENQTMEKTSTLKNMSLFSTLEAKRPQGASCLESSGTSTE 146
           DE++  KK+R  ++S KEN+KEN   +++S+L N+SL S L A + Q     E +  STE
Sbjct: 64  DELYPVKKARPWMLSGKENSKENGA-KQSSSLINVSLLSNLAATKRQLIR--EENNASTE 120

Query: 147 ARIDGPLQACQTNEKCGQGKFLSVSELSQAADKSSGLAASIDMGKALRGLAAFEPQV--- 203
              D   +A QTNE+C Q  F SV++LS   ++ S L   IDM KAL+GLA  EP +   
Sbjct: 121 VPDDTKAEARQTNERCSQSIFRSVTQLSTRGEELSCLP-DIDMNKALKGLATCEPLLVHP 179

Query: 204 -DNGLADDSSERHGELKSSINGSFFSECHVPGQKAPLDLTLKTSMRIVSSSSVNW---SV 259
            D    DD++        S++GSF SE  V GQK PLDL+LKT  R+VSSS ++W   S+
Sbjct: 180 GDITGEDDTA--------SLSGSFMSEFQVSGQKIPLDLSLKTYARLVSSSPLSWLHRSI 231

Query: 260 MRGT---MSQPAFQQCPIKSPNTRGSQGFKV---------LHSWLYPQXXXXXXXXXXXX 307
           M  T   M Q     C + + +     G  V         LHSW+YPQ            
Sbjct: 232 MGSTYNGMPQLKSLSCNVVNQDNSSGSGASVVSQVLNSMSLHSWVYPQSTLPPFVISAMV 291

Query: 308 XXTAD-AELEFLKKRQVAWEESFRDLYYMLRKNICGLFYVCTSQFVVMFTGGDSTGRSKC 366
              +D  E++FL+KR++AWE++FR LY+M RKN+C +FYVCTSQFV MFTG   +G +K 
Sbjct: 292 ASVSDRGEVDFLQKRKLAWEDAFRSLYFMFRKNLCKVFYVCTSQFVAMFTGSCESGGAKR 351

Query: 367 SCNAYISQSTIGLRSLLKEHDLCFSMPLCHSKVEQAATEDLVELSEIEKQNLGQTRRIRS 426
           SCN YI+QST  LR++LK  D+C+SMPLC +K++Q   EDL ELSE+E  N+GQ RR RS
Sbjct: 352 SCNGYITQSTRRLRAMLKNLDICYSMPLCKTKMDQTTVEDLAELSELENHNIGQIRRSRS 411

Query: 427 FSDIDNSPQSLLVFSGNNNVHGLYDFLLNYRTLLTSLSGVDVPVLCSPVPFQNSALSSPD 486
            S+IDN+P+S L F GN +VHGLYD LLNYR     L   DVPVL SPVPFQN+ALSSP+
Sbjct: 412 VSNIDNTPESFLAFVGNESVHGLYDLLLNYRYSFEFLPTADVPVLSSPVPFQNAALSSPE 471

Query: 487 IKCMETRRAEHFGASYNESIGKDGESAPDGLCYSIEIKDALLPPWIICGMCALIGSEGRS 546
           IKC E  + EH                    CY +EIK   +PPWII  +CA +G+ G++
Sbjct: 472 IKCSEMVKTEHTS------------------CYMVEIKGEYIPPWIISNICANVGANGQN 513

Query: 547 FEASFVAEPSSIGLNVALKPTCXXXXXXXXXXXXLEDCSDTFG-IPEAVVTSSMWSCSVK 605
           FEASFV EP+S+ LN+ L                  + +D    IP +V+   + S  +K
Sbjct: 514 FEASFVTEPTSVNLNIGLPQVPEKTDPESRVIEGTGETNDNASDIPGSVICPQLQSGHLK 573

Query: 606 SLKYCNASYTASLSP 620
           +LKYCN SYT SLSP
Sbjct: 574 NLKYCNKSYTVSLSP 588