Miyakogusa Predicted Gene

Lj1g3v4752940.3

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4752940.3 Non Chatacterized Hit- tr|D8T3B2|D8T3B2_SELML
Putative uncharacterized protein OS=Selaginella moelle,40.83,5e-18,Bet
v1-like,NULL; seg,NULL; no description,START-like domain,CUFF.33129.3
         (437 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G06440.3 | Symbols:  | BEST Arabidopsis thaliana protein matc...   176   3e-44
AT5G06440.2 | Symbols:  | BEST Arabidopsis thaliana protein matc...   176   3e-44
AT5G06440.1 | Symbols:  | BEST Arabidopsis thaliana protein matc...   175   7e-44
AT5G06440.4 | Symbols:  | FUNCTIONS IN: molecular_function unkno...   172   5e-43
AT3G11720.2 | Symbols:  | Polyketide cyclase/dehydrase and lipid...   149   3e-36
AT3G11720.1 | Symbols:  | Polyketide cyclase/dehydrase and lipid...   149   3e-36
AT3G11720.3 | Symbols:  | Polyketide cyclase/dehydrase and lipid...   149   5e-36

>AT5G06440.3 | Symbols:  | BEST Arabidopsis thaliana protein match
           is: Polyketide cyclase/dehydrase and lipid transport
           superfamily protein (TAIR:AT3G11720.3); Has 157 Blast
           hits to 155 proteins in 41 species: Archae - 0; Bacteria
           - 6; Metazoa - 5; Fungi - 6; Plants - 99; Viruses - 0;
           Other Eukaryotes - 41 (source: NCBI BLink). |
           chr5:1964641-1966807 REVERSE LENGTH=479
          Length = 479

 Score =  176 bits (446), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 85/172 (49%), Positives = 123/172 (71%), Gaps = 9/172 (5%)

Query: 1   MKVPWPLSKREAIVHYYLVEYFQEDLTIVLIKSVSESESMDGAIDGINRDAIPEAKDVVR 60
           MKVPWPL++RE I+HY+  EYF++ L ++L+ ++S+  S+  +   I    IPE+ D VR
Sbjct: 160 MKVPWPLTEREMILHYFSFEYFKDGLVVILLNTISDLNSIGVSSTDI---IIPESPDAVR 216

Query: 61  IDFVGGYVLQKVTSERSYFRTMANLDIKLDFVPPTLINFISRQLIGSGFRLYQKAVSSMM 120
           +D VGG+VLQKVT +RSYFRT+ ++DIKLD +PP+L+NFISRQLIG+GFRLY+K+V+S+ 
Sbjct: 217 MDLVGGFVLQKVTPQRSYFRTIGDMDIKLDLMPPSLMNFISRQLIGNGFRLYKKSVASVA 276

Query: 121 NNDKEIIKTLGDSLYVGIREALYNTSGS----NAMDGEELNIVSSILPAEEH 168
             D++  + L D LY  IR ALY+T  +      ++  E+N V+  LP  EH
Sbjct: 277 KFDEDYSRALTDPLYTKIRRALYSTDEAVEEEPKLETNEVNGVT--LPKHEH 326


>AT5G06440.2 | Symbols:  | BEST Arabidopsis thaliana protein match
           is: Polyketide cyclase/dehydrase and lipid transport
           superfamily protein (TAIR:AT3G11720.3); Has 157 Blast
           hits to 155 proteins in 41 species: Archae - 0; Bacteria
           - 6; Metazoa - 5; Fungi - 6; Plants - 99; Viruses - 0;
           Other Eukaryotes - 41 (source: NCBI BLink). |
           chr5:1964641-1966807 REVERSE LENGTH=479
          Length = 479

 Score =  176 bits (446), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 85/172 (49%), Positives = 123/172 (71%), Gaps = 9/172 (5%)

Query: 1   MKVPWPLSKREAIVHYYLVEYFQEDLTIVLIKSVSESESMDGAIDGINRDAIPEAKDVVR 60
           MKVPWPL++RE I+HY+  EYF++ L ++L+ ++S+  S+  +   I    IPE+ D VR
Sbjct: 160 MKVPWPLTEREMILHYFSFEYFKDGLVVILLNTISDLNSIGVSSTDI---IIPESPDAVR 216

Query: 61  IDFVGGYVLQKVTSERSYFRTMANLDIKLDFVPPTLINFISRQLIGSGFRLYQKAVSSMM 120
           +D VGG+VLQKVT +RSYFRT+ ++DIKLD +PP+L+NFISRQLIG+GFRLY+K+V+S+ 
Sbjct: 217 MDLVGGFVLQKVTPQRSYFRTIGDMDIKLDLMPPSLMNFISRQLIGNGFRLYKKSVASVA 276

Query: 121 NNDKEIIKTLGDSLYVGIREALYNTSGS----NAMDGEELNIVSSILPAEEH 168
             D++  + L D LY  IR ALY+T  +      ++  E+N V+  LP  EH
Sbjct: 277 KFDEDYSRALTDPLYTKIRRALYSTDEAVEEEPKLETNEVNGVT--LPKHEH 326


>AT5G06440.1 | Symbols:  | BEST Arabidopsis thaliana protein match
           is: Polyketide cyclase/dehydrase and lipid transport
           superfamily protein (TAIR:AT3G11720.3); Has 155 Blast
           hits to 153 proteins in 39 species: Archae - 0; Bacteria
           - 4; Metazoa - 5; Fungi - 6; Plants - 101; Viruses - 0;
           Other Eukaryotes - 39 (source: NCBI BLink). |
           chr5:1964641-1966475 REVERSE LENGTH=405
          Length = 405

 Score =  175 bits (443), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 85/172 (49%), Positives = 123/172 (71%), Gaps = 9/172 (5%)

Query: 1   MKVPWPLSKREAIVHYYLVEYFQEDLTIVLIKSVSESESMDGAIDGINRDAIPEAKDVVR 60
           MKVPWPL++RE I+HY+  EYF++ L ++L+ ++S+  S+  +   I    IPE+ D VR
Sbjct: 86  MKVPWPLTEREMILHYFSFEYFKDGLVVILLNTISDLNSIGVSSTDI---IIPESPDAVR 142

Query: 61  IDFVGGYVLQKVTSERSYFRTMANLDIKLDFVPPTLINFISRQLIGSGFRLYQKAVSSMM 120
           +D VGG+VLQKVT +RSYFRT+ ++DIKLD +PP+L+NFISRQLIG+GFRLY+K+V+S+ 
Sbjct: 143 MDLVGGFVLQKVTPQRSYFRTIGDMDIKLDLMPPSLMNFISRQLIGNGFRLYKKSVASVA 202

Query: 121 NNDKEIIKTLGDSLYVGIREALYNTSGS----NAMDGEELNIVSSILPAEEH 168
             D++  + L D LY  IR ALY+T  +      ++  E+N V+  LP  EH
Sbjct: 203 KFDEDYSRALTDPLYTKIRRALYSTDEAVEEEPKLETNEVNGVT--LPKHEH 252


>AT5G06440.4 | Symbols:  | FUNCTIONS IN: molecular_function unknown;
           INVOLVED IN: biological_process unknown; LOCATED IN:
           mitochondrion; EXPRESSED IN: 22 plant structures;
           EXPRESSED DURING: 12 growth stages; BEST Arabidopsis
           thaliana protein match is: Polyketide cyclase/dehydrase
           and lipid transport superfamily protein
           (TAIR:AT3G11720.3). | chr5:1964641-1966807 REVERSE
           LENGTH=486
          Length = 486

 Score =  172 bits (435), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 83/171 (48%), Positives = 122/171 (71%), Gaps = 9/171 (5%)

Query: 2   KVPWPLSKREAIVHYYLVEYFQEDLTIVLIKSVSESESMDGAIDGINRDAIPEAKDVVRI 61
           +VPWPL++RE I+HY+  EYF++ L ++L+ ++S+  S+  +   I    IPE+ D VR+
Sbjct: 168 EVPWPLTEREMILHYFSFEYFKDGLVVILLNTISDLNSIGVSSTDI---IIPESPDAVRM 224

Query: 62  DFVGGYVLQKVTSERSYFRTMANLDIKLDFVPPTLINFISRQLIGSGFRLYQKAVSSMMN 121
           D VGG+VLQKVT +RSYFRT+ ++DIKLD +PP+L+NFISRQLIG+GFRLY+K+V+S+  
Sbjct: 225 DLVGGFVLQKVTPQRSYFRTIGDMDIKLDLMPPSLMNFISRQLIGNGFRLYKKSVASVAK 284

Query: 122 NDKEIIKTLGDSLYVGIREALYNTSGS----NAMDGEELNIVSSILPAEEH 168
            D++  + L D LY  IR ALY+T  +      ++  E+N V+  LP  EH
Sbjct: 285 FDEDYSRALTDPLYTKIRRALYSTDEAVEEEPKLETNEVNGVT--LPKHEH 333


>AT3G11720.2 | Symbols:  | Polyketide cyclase/dehydrase and lipid
           transport superfamily protein | chr3:3705991-3708310
           REVERSE LENGTH=542
          Length = 542

 Score =  149 bits (377), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 71/151 (47%), Positives = 106/151 (70%), Gaps = 13/151 (8%)

Query: 1   MKVPWPLSKREAIVHYYLVEYFQEDLTIVLIKSVSESESMDGAIDGINRDAIPEAKDVVR 60
           +K PWPL+ REA++ +++ EYF++DL I+L+ S+ E ES  G++  +N          VR
Sbjct: 164 VKAPWPLTDREAVLQFFVFEYFKDDLVIILLNSI-EVES--GSVAEVN---------AVR 211

Query: 61  IDFVGGYVLQKVTSERSYFRTMANLDIKLDFVPPTLINFISRQLIGSGFRLYQKAVSSMM 120
           IDFVGG  +QKVT E+SY R +A +DIKLD VPP+LINF+SRQL+G+GF+L++K + S+ 
Sbjct: 212 IDFVGGVAIQKVTPEKSYIRFIAEVDIKLDLVPPSLINFMSRQLLGNGFKLFKKTIGSVA 271

Query: 121 NNDKEIIKTLGDSLYVGIREALYNTSGSNAM 151
            +D +    L D LY  IREALY++  ++ +
Sbjct: 272 ESD-DYKTVLADPLYTHIREALYSSDKTDEI 301


>AT3G11720.1 | Symbols:  | Polyketide cyclase/dehydrase and lipid
           transport superfamily protein | chr3:3705991-3708310
           REVERSE LENGTH=542
          Length = 542

 Score =  149 bits (377), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 71/151 (47%), Positives = 106/151 (70%), Gaps = 13/151 (8%)

Query: 1   MKVPWPLSKREAIVHYYLVEYFQEDLTIVLIKSVSESESMDGAIDGINRDAIPEAKDVVR 60
           +K PWPL+ REA++ +++ EYF++DL I+L+ S+ E ES  G++  +N          VR
Sbjct: 164 VKAPWPLTDREAVLQFFVFEYFKDDLVIILLNSI-EVES--GSVAEVN---------AVR 211

Query: 61  IDFVGGYVLQKVTSERSYFRTMANLDIKLDFVPPTLINFISRQLIGSGFRLYQKAVSSMM 120
           IDFVGG  +QKVT E+SY R +A +DIKLD VPP+LINF+SRQL+G+GF+L++K + S+ 
Sbjct: 212 IDFVGGVAIQKVTPEKSYIRFIAEVDIKLDLVPPSLINFMSRQLLGNGFKLFKKTIGSVA 271

Query: 121 NNDKEIIKTLGDSLYVGIREALYNTSGSNAM 151
            +D +    L D LY  IREALY++  ++ +
Sbjct: 272 ESD-DYKTVLADPLYTHIREALYSSDKTDEI 301


>AT3G11720.3 | Symbols:  | Polyketide cyclase/dehydrase and lipid
           transport superfamily protein | chr3:3705991-3708721
           REVERSE LENGTH=596
          Length = 596

 Score =  149 bits (375), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 71/151 (47%), Positives = 106/151 (70%), Gaps = 13/151 (8%)

Query: 1   MKVPWPLSKREAIVHYYLVEYFQEDLTIVLIKSVSESESMDGAIDGINRDAIPEAKDVVR 60
           +K PWPL+ REA++ +++ EYF++DL I+L+ S+ E ES  G++  +N          VR
Sbjct: 218 VKAPWPLTDREAVLQFFVFEYFKDDLVIILLNSI-EVES--GSVAEVN---------AVR 265

Query: 61  IDFVGGYVLQKVTSERSYFRTMANLDIKLDFVPPTLINFISRQLIGSGFRLYQKAVSSMM 120
           IDFVGG  +QKVT E+SY R +A +DIKLD VPP+LINF+SRQL+G+GF+L++K + S+ 
Sbjct: 266 IDFVGGVAIQKVTPEKSYIRFIAEVDIKLDLVPPSLINFMSRQLLGNGFKLFKKTIGSVA 325

Query: 121 NNDKEIIKTLGDSLYVGIREALYNTSGSNAM 151
            +D +    L D LY  IREALY++  ++ +
Sbjct: 326 ESD-DYKTVLADPLYTHIREALYSSDKTDEI 355