Miyakogusa Predicted Gene

Lj1g3v4752830.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4752830.1 tr|G7KD19|G7KD19_MEDTR Anaphase-promoting complex
subunit OS=Medicago truncatula GN=MTR_5g091030
PE=,81.03,1e-18,SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL,BP035449.path1.1
         (105 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G06590.1 | Symbols:  | unknown protein; Has 380 Blast hits to...   129   3e-31

>AT1G06590.1 | Symbols:  | unknown protein; Has 380 Blast hits to
           268 proteins in 109 species: Archae - 0; Bacteria - 0;
           Metazoa - 245; Fungi - 73; Plants - 49; Viruses - 0;
           Other Eukaryotes - 13 (source: NCBI BLink). |
           chr1:2016504-2024505 REVERSE LENGTH=916
          Length = 916

 Score =  129 bits (325), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 66/96 (68%), Positives = 81/96 (84%)

Query: 1   MILGHGGLELRSRAYIVEAKCYLCNTNFNIFEDYNIVIDPLRQASEELQLLEFHELAAEA 60
           MILGHGGLELR+RAYI EA CYL + + ++  D + V+D LRQAS+ELQ LE+HELAAEA
Sbjct: 815 MILGHGGLELRARAYIFEANCYLSDPSSSVSTDSDTVLDSLRQASDELQALEYHELAAEA 874

Query: 61  FYLMAMVYDKLGQYEEREEAAASFQKHTLALDNPQD 96
            YLMAMVYDKLG+ +EREEAA+ F+KH +AL+NPQD
Sbjct: 875 SYLMAMVYDKLGRLDEREEAASLFKKHIIALENPQD 910