Miyakogusa Predicted Gene
- Lj1g3v4752550.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v4752550.1 Non Chatacterized Hit- tr|I1JQ95|I1JQ95_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,76.29,0,Modified RING
finger domain,U box domain; U-box,U box domain; seg,NULL; SUBFAMILY
NOT NAMED,NULL; FA,CUFF.33070.1
(423 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G52450.1 | Symbols: PUB22 | plant U-box 22 | chr3:19440943-19... 483 e-137
AT2G35930.1 | Symbols: PUB23 | plant U-box 23 | chr2:15083101-15... 466 e-131
AT3G11840.1 | Symbols: PUB24 | plant U-box 24 | chr3:3736578-373... 269 2e-72
AT3G19380.1 | Symbols: PUB25 | plant U-box 25 | chr3:6714602-671... 205 5e-53
AT1G49780.1 | Symbols: PUB26 | plant U-box 26 | chr1:18429024-18... 182 5e-46
AT5G37490.1 | Symbols: | ARM repeat superfamily protein | chr5:... 166 4e-41
AT1G66160.1 | Symbols: ATCMPG1, CMPG1 | CYS, MET, PRO, and GLY p... 162 5e-40
AT1G66160.2 | Symbols: ATCMPG1, CMPG1 | CYS, MET, PRO, and GLY p... 127 1e-29
AT3G18710.1 | Symbols: PUB29, ATPUB29 | plant U-box 29 | chr3:64... 125 6e-29
AT1G23030.1 | Symbols: | ARM repeat superfamily protein | chr1:... 121 8e-28
AT3G46510.1 | Symbols: PUB13, ATPUB13 | plant U-box 13 | chr3:17... 116 3e-26
AT3G49810.1 | Symbols: | ARM repeat superfamily protein | chr3:... 115 6e-26
AT5G09800.1 | Symbols: | ARM repeat superfamily protein | chr5:... 112 5e-25
AT5G64660.1 | Symbols: ATCMPG2, CMPG2 | CYS, MET, PRO, and GLY p... 111 9e-25
AT1G71020.2 | Symbols: | ARM repeat superfamily protein | chr1:... 110 1e-24
AT1G71020.1 | Symbols: | ARM repeat superfamily protein | chr1:... 110 2e-24
AT5G65920.1 | Symbols: | ARM repeat superfamily protein | chr5:... 108 8e-24
AT2G28830.1 | Symbols: PUB12, AtPUB12 | PLANT U-BOX 12 | chr2:12... 106 2e-23
AT3G54850.1 | Symbols: ATPUB14, PUB14 | plant U-box 14 | chr3:20... 103 2e-22
AT5G42340.1 | Symbols: PUB15 | Plant U-Box 15 | chr5:16928086-16... 98 1e-20
AT4G21350.1 | Symbols: B80, PUB8 | plant U-box 8 | chr4:11356143... 95 1e-19
AT3G02840.1 | Symbols: | ARM repeat superfamily protein | chr3:... 91 1e-18
AT1G29340.1 | Symbols: PUB17, ATPUB17 | plant U-box 17 | chr1:10... 86 5e-17
AT5G01830.1 | Symbols: | ARM repeat superfamily protein | chr5:... 82 9e-16
AT3G07360.1 | Symbols: PUB9, ATPUB9 | plant U-box 9 | chr3:23548... 81 2e-15
AT5G18320.1 | Symbols: | ARM repeat superfamily protein | chr5:... 81 2e-15
AT1G10560.1 | Symbols: PUB18, ATPUB18 | plant U-box 18 | chr1:34... 75 8e-14
AT5G18340.1 | Symbols: | ARM repeat superfamily protein | chr5:... 75 9e-14
AT1G27910.1 | Symbols: PUB45, ATPUB45 | plant U-box 45 | chr1:97... 74 2e-13
AT1G67530.2 | Symbols: | ARM repeat superfamily protein | chr1:... 74 2e-13
AT1G67530.1 | Symbols: | ARM repeat superfamily protein | chr1:... 74 2e-13
AT1G24330.1 | Symbols: | ARM repeat superfamily protein | chr1:... 73 3e-13
AT1G68940.2 | Symbols: | Armadillo/beta-catenin-like repeat fam... 73 4e-13
AT1G68940.3 | Symbols: | Armadillo/beta-catenin-like repeat fam... 73 4e-13
AT1G68940.1 | Symbols: | Armadillo/beta-catenin-like repeat fam... 73 4e-13
AT3G54790.2 | Symbols: | ARM repeat superfamily protein | chr3:... 71 1e-12
AT2G23140.1 | Symbols: | RING/U-box superfamily protein with AR... 71 1e-12
AT2G23140.2 | Symbols: | RING/U-box superfamily protein with AR... 71 1e-12
AT5G18330.1 | Symbols: | ARM repeat superfamily protein | chr5:... 71 2e-12
AT3G54790.1 | Symbols: | ARM repeat superfamily protein | chr3:... 71 2e-12
AT5G65500.1 | Symbols: | U-box domain-containing protein kinase... 70 3e-12
AT1G60190.1 | Symbols: | ARM repeat superfamily protein | chr1:... 70 3e-12
AT5G67340.1 | Symbols: | ARM repeat superfamily protein | chr5:... 70 3e-12
AT1G01660.1 | Symbols: | RING/U-box superfamily protein | chr1:... 70 3e-12
AT3G49060.1 | Symbols: | U-box domain-containing protein kinase... 67 2e-11
AT3G49060.2 | Symbols: | U-box domain-containing protein kinase... 67 2e-11
AT1G01680.1 | Symbols: ATPUB54, PUB54 | plant U-box 54 | chr1:24... 67 3e-11
AT2G45920.1 | Symbols: | U-box domain-containing protein | chr2... 65 7e-11
AT5G51270.1 | Symbols: | U-box domain-containing protein kinase... 65 9e-11
AT2G45910.1 | Symbols: | U-box domain-containing protein kinase... 65 1e-10
AT5G57035.1 | Symbols: | U-box domain-containing protein kinase... 64 2e-10
AT2G19410.1 | Symbols: | U-box domain-containing protein kinase... 64 2e-10
AT4G36550.1 | Symbols: | ARM repeat superfamily protein | chr4:... 63 3e-10
AT1G76390.2 | Symbols: | ARM repeat superfamily protein | chr1:... 63 4e-10
AT1G76390.1 | Symbols: | ARM repeat superfamily protein | chr1:... 63 4e-10
AT1G56040.1 | Symbols: | HEAT/U-box domain-containing protein |... 62 8e-10
AT1G20780.1 | Symbols: PUB44, ATPUB44, SAUL1 | senescence-associ... 62 8e-10
AT4G25160.1 | Symbols: | U-box domain-containing protein kinase... 59 4e-09
AT5G61550.1 | Symbols: | U-box domain-containing protein kinase... 59 4e-09
AT5G61550.2 | Symbols: | U-box domain-containing protein kinase... 59 5e-09
AT3G61390.2 | Symbols: | RING/U-box superfamily protein | chr3:... 58 1e-08
AT5G61560.2 | Symbols: | U-box domain-containing protein kinase... 55 7e-08
AT5G61560.1 | Symbols: | U-box domain-containing protein kinase... 55 7e-08
AT5G40140.1 | Symbols: | RING/U-box superfamily protein with AR... 52 1e-06
AT5G65200.1 | Symbols: PUB38, ATPUB38 | plant U-box 38 | chr5:26... 50 4e-06
>AT3G52450.1 | Symbols: PUB22 | plant U-box 22 |
chr3:19440943-19442250 REVERSE LENGTH=435
Length = 435
Score = 483 bits (1244), Expect = e-137, Method: Compositional matrix adjust.
Identities = 245/433 (56%), Positives = 326/433 (75%), Gaps = 28/433 (6%)
Query: 1 MD-EVDVPSYFLCPISLEIMKDPVTVTTGITYDRESIEKWLFSKNNTKTITCPVTKQPLS 59
MD E+++PS+FLCPISL+IMKDPV V+TGITYDRESIEKWLFS K +CPVTKQ ++
Sbjct: 1 MDQEIEIPSFFLCPISLDIMKDPVIVSTGITYDRESIEKWLFSG---KKNSCPVTKQVIT 57
Query: 60 DCSADLTLTPNHTLRRLIQAWCTMNASHGVERIPTPKPPVNKTQISKLLKDASRSPLMQI 119
+ LTPNHTLRRLIQ+WCT+NAS+G+ERIPTPKPP+ K++I KL+K++S S L Q+
Sbjct: 58 ETD----LTPNHTLRRLIQSWCTLNASYGIERIPTPKPPICKSEIEKLIKESSSSHLNQV 113
Query: 120 KCLQRLKSIASGSETNKRCIEAAGGVEFLASIVMNSIDSAVTSPE--------------- 164
KCL+RL+ I S + TNKRC+EAA EFLA+IV NS+D+ +
Sbjct: 114 KCLKRLRQIVSENTTNKRCLEAAEVPEFLANIVSNSVDTYNSPSSSLSSSNLNDMCQSNM 173
Query: 165 -DNGFELRTSAGDEALSILHHLNLSEPGLKTLLSFKNG-DFIASLTRVMQKGFFESRAYA 222
+N F+ S DEALS+L+HL+ SE LK+LL+ K G + + +LT++MQ+G +ESRAYA
Sbjct: 174 LENRFDSSRSLMDEALSVLYHLDTSETALKSLLNNKKGTNLVKTLTKIMQRGIYESRAYA 233
Query: 223 VFLLKSMSGIADSVQLFNLKTEFFVELVQVLRDEISLKATKATIQTLIQVCPLGRNRVKA 282
LLK + +AD +Q+ L+ E F E++Q+L D+IS KAT++ +Q L+ CP GRNR KA
Sbjct: 234 ALLLKKLLEVADPMQIILLERELFGEVIQILHDQISHKATRSAMQILVITCPWGRNRHKA 293
Query: 283 VDAGSVFVLTELLLN---CKERKPCEMMLVLLDLLCQCAEGRAELLSHAAGLAVVSKKIL 339
V+ G++ ++ ELL++ ER+ EM +V+LD+LCQCAEGRAE L+H A +AVVSKKIL
Sbjct: 294 VEGGTISMIIELLMDDTFSSERRNSEMAMVVLDMLCQCAEGRAEFLNHGAAIAVVSKKIL 353
Query: 340 RVSTVANDRAVRILLSVCRFSASPSVLQEMLKLGVVAKLCLVLQVDSGSKAKEKAREILK 399
RVS + ++RAVR+LLSV RF A+PS+LQEML+LGVVAKLCLVLQV G+K KEKA+E+LK
Sbjct: 354 RVSQITSERAVRVLLSVGRFCATPSLLQEMLQLGVVAKLCLVLQVSCGNKTKEKAKELLK 413
Query: 400 LHGKAWRHSPCIP 412
LH + WR SPC+P
Sbjct: 414 LHARVWRESPCVP 426
>AT2G35930.1 | Symbols: PUB23 | plant U-box 23 |
chr2:15083101-15084336 REVERSE LENGTH=411
Length = 411
Score = 466 bits (1199), Expect = e-131, Method: Compositional matrix adjust.
Identities = 242/415 (58%), Positives = 312/415 (75%), Gaps = 24/415 (5%)
Query: 2 DEVDVPSYFLCPISLEIMKDPVTVTTGITYDRESIEKWLFSKNNTKTITCPVTKQPLSDC 61
+E+++P +FLCPISLEIMKDPV V+TGITYDR+SIEKWLF+ K +CPVTKQ ++D
Sbjct: 8 EEIEIPPFFLCPISLEIMKDPVIVSTGITYDRDSIEKWLFA---GKKNSCPVTKQDITD- 63
Query: 62 SADLTLTPNHTLRRLIQAWCTMNASHGVERIPTPKPPVNKTQISKLLKDASRSPLMQIKC 121
ADLT PNHTLRRLIQ+WCT+NAS+GVERIPTP+PP+ K++I KL++D++ S Q+KC
Sbjct: 64 -ADLT--PNHTLRRLIQSWCTLNASYGVERIPTPRPPICKSEIEKLIRDSASSHENQVKC 120
Query: 122 LQRLKSIASGSETNKRCIEAAGGVEFLASIVMNSIDSAVTSPEDNGFELRTSAGDEALSI 181
L+RL+ I S + TNKRC+EAAG EFLA+IV N DS +NG S DEAL++
Sbjct: 121 LKRLRQIVSENATNKRCLEAAGVPEFLANIVSN--DS------ENG-----SLTDEALNL 167
Query: 182 LHHLNLSEP-GLKTLLSFKNGDFIASLTRVMQKGFFESRAYAVFLLKSMSGIADSVQLFN 240
L+HL SE L + K+ + + SLT++MQ+G +ESR YA LLK++ +AD +Q
Sbjct: 168 LYHLETSETVLKNLLNNKKDNNIVKSLTKIMQRGMYESRVYATLLLKNILEVADPMQSMT 227
Query: 241 LKTEFFVELVQVLRDEISLKATKATIQTLIQVCPLGRNRVKAVDAGSVFVLTELLLN--- 297
LK E F E+VQ+L D IS KATKA + L+ +CP GRNR KAV+AG + V+ ELL++
Sbjct: 228 LKPEVFTEVVQILDDRISQKATKAAMHILVNICPWGRNRHKAVEAGVISVIIELLMDESF 287
Query: 298 CKERKPCEMMLVLLDLLCQCAEGRAELLSHAAGLAVVSKKILRVSTVANDRAVRILLSVC 357
ER+ EM +V+LDLLCQCAEGRAE L+H A +AVV KKILRVS A+DRAVR+LLSV
Sbjct: 288 TSERRGPEMAMVVLDLLCQCAEGRAEFLNHGAAIAVVCKKILRVSQTASDRAVRVLLSVG 347
Query: 358 RFSASPSVLQEMLKLGVVAKLCLVLQVDSGSKAKEKAREILKLHGKAWRHSPCIP 412
RF A+P++L EML+LGVVAKLCLVLQV G K KEKA+E+LKLH + W+ SPC+P
Sbjct: 348 RFCATPALLHEMLQLGVVAKLCLVLQVSCGGKTKEKAKELLKLHARVWKDSPCLP 402
>AT3G11840.1 | Symbols: PUB24 | plant U-box 24 |
chr3:3736578-3738250 REVERSE LENGTH=470
Length = 470
Score = 269 bits (688), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 171/449 (38%), Positives = 244/449 (54%), Gaps = 55/449 (12%)
Query: 2 DEVDVPSYFLCPISLEIMKDPVTVTTGITYDRESIEKWLFSKNNTKTITCPVTKQPLSDC 61
+E+++P+YF+CPISLEIMKDPVT +GITYDR++I KWL K +CPVTKQPL
Sbjct: 20 EEIEIPNYFICPISLEIMKDPVTTVSGITYDRQNIVKWL-----EKVPSCPVTKQPL--- 71
Query: 62 SADLTLTPNHTLRRLIQAWCTMNASHGVERIPTPKPPVNKTQIS---KLLKDASRSPLMQ 118
D LTPNH LRRLIQ WC N + GV RI TP+ P K + K LK + L +
Sbjct: 72 PLDSDLTPNHMLRRLIQHWCVENETRGVVRISTPRVPPGKLNVVEEIKNLKKFGQEALGR 131
Query: 119 IKCLQRLKSIASGSETNKRCIEAAGGVEFLASIVMNSIDSAVTSPEDNGFELRTSAGDEA 178
+ LQ+L+ +A N+R + G + L V+ + ED R DE+
Sbjct: 132 EETLQKLEVLAMDG-NNRRLMCECGVHKSLILFVVKC------TSEDEDGRRRIKGLDES 184
Query: 179 LSILHHLNLSEPGLKTLLSFKNGDFIASLTRVMQKGFFESRAYAVFLLKSMSGIADSVQL 238
L +LH + + KT+L +N + SLT V+ + F S+AY + LL++++ S +
Sbjct: 185 LRLLHLIGIPSNDAKTIL-MENDRVMESLTWVLHQEDFLSKAYTIVLLRNLTEYTSSHIV 243
Query: 239 FNLKTEFFVELVQVLRDEIS-----------------------------------LKATK 263
L E F ++ L+D ++ +A
Sbjct: 244 ERLNPEIFKGIIGFLKDVVNSVNRTSPTVRETVQSSSRPSLGKTEPSKLDHSLVIKQAVT 303
Query: 264 ATIQTLIQVCPLGRNRVKAVDAGSVFVLTELLLN-CKERKPCEMMLVLLDLLCQCAEGRA 322
A + L++ RNR VD G+V L EL ++ E++ E+ML +L LC CA GRA
Sbjct: 304 AALMILLETSSWSRNRSLLVDLGAVSELIELEISYTGEKRITELMLGVLSRLCCCANGRA 363
Query: 323 ELLSHAAGLAVVSKKILRVSTVANDRAVRILLSVCRFSASPSVLQEMLKLGVVAKLCLVL 382
E+L+H G+AVV+K++LRVS A+DRA+ IL +V +FS V++EM+ +G V KLC VL
Sbjct: 364 EILAHRGGIAVVTKRLLRVSPAADDRAISILTTVSKFSPENMVVEEMVNVGTVEKLCSVL 423
Query: 383 QVDSGSKAKEKAREILKLHGKAWRHSPCI 411
+D G KEKA+EILK H W+ PCI
Sbjct: 424 GMDCGLNLKEKAKEILKDHFDEWKKFPCI 452
>AT3G19380.1 | Symbols: PUB25 | plant U-box 25 |
chr3:6714602-6715867 REVERSE LENGTH=421
Length = 421
Score = 205 bits (521), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 147/390 (37%), Positives = 207/390 (53%), Gaps = 33/390 (8%)
Query: 4 VDVPSYFLCPISLEIMKDPVTVTTGITYDRESIEKWLFSKNNTKTITCPVTKQPLSDCSA 63
+ +P +F CPISLE+M+DPVTV TG TYDR SIE W+ NNT TCPVT+ PLSD
Sbjct: 12 IQIPYHFRCPISLELMQDPVTVCTGQTYDRASIESWVSIGNNT---TCPVTRAPLSD--- 65
Query: 64 DLTLTPNHTLRRLIQAWCTMNASHGVERIPTPKPPVNKTQISKLLKDASR------SPLM 117
TL PNHTLRRLIQ WC N S+GVERIPTPK P + T + LL AS S
Sbjct: 66 -FTLIPNHTLRRLIQEWCVANRSNGVERIPTPKQPADPTSVRALLSQASAITGTHVSVRS 124
Query: 118 QIKCLQRLKSIASGSETNKRCIEAAGGVEFLASIVMNSIDSAVTSPEDNGFELRTSAGDE 177
+ L+RL+ A S+ N+ I A E L I+ + S+ EL + E
Sbjct: 125 RAAALRRLRGFARDSDKNRVLIAAHNATEILIKILFSETTSS---------ELVS----E 171
Query: 178 ALSILHHLNLSEPGLKTLLSFKNGDFIASLTRVMQKGFFESRAYAVFLLKSMSGIADSVQ 237
+L++L L ++EP +S G + LTR++ E+R A L++ +S S
Sbjct: 172 SLALLVMLPITEPNQFVSISSDPGR-VEFLTRLLFDSSIETRVNAAALIEIVSTGTKSAD 230
Query: 238 L---FNLKTEFFVELVQVLRDEI-SLKATKATIQTLIQVCPLGRNRVKAVDAGSVFVLTE 293
L + F ++ +LR+ I S +A K I+TL +C + R A+ AG+ +L +
Sbjct: 231 LKGSISNSESVFEGVLDLLRNPISSRRALKIGIKTLFALCSVKSTRHIAITAGAPEILID 290
Query: 294 LLLNCKERKPCEMMLVLLDLLCQCAEGRAELLSHAAGLAVVSKKILRVSTVANDRAVRIL 353
L +R E L ++LLC+ EG A HA + ++ K ILRVS A + A L
Sbjct: 291 RLAADFDRCDTERALATVELLCRTPEGCAAFGEHALTVPLLVKTILRVSDRATEYAAGAL 350
Query: 354 LSVCRFSASPSVLQEMLKLGVVAKLCLVLQ 383
L++C +A +E GVV +L L++Q
Sbjct: 351 LALC--TAEERWREEAAGAGVVVQLLLMVQ 378
>AT1G49780.1 | Symbols: PUB26 | plant U-box 26 |
chr1:18429024-18430289 REVERSE LENGTH=421
Length = 421
Score = 182 bits (461), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 140/412 (33%), Positives = 210/412 (50%), Gaps = 31/412 (7%)
Query: 4 VDVPSYFLCPISLEIMKDPVTVTTGITYDRESIEKWLFSKNNTKTITCPVTKQPLSDCSA 63
+ +P +F CPISL++M DPVT++TG TYDR SI+ W+ N T CPVT+ LSD
Sbjct: 12 IQIPYHFRCPISLDLMSDPVTISTGQTYDRTSIDSWIAMGNTT----CPVTRVALSD--- 64
Query: 64 DLTLTPNHTLRRLIQAWCTMNASHGVERIPTPKPPVNKTQISKLLKDASR------SPLM 117
TL PNHTLRRLIQ WC N S+GVERIPTPK P + + LL AS S
Sbjct: 65 -FTLIPNHTLRRLIQEWCVANRSNGVERIPTPKQPADPISVRSLLSQASAITGTHVSVRS 123
Query: 118 QIKCLQRLKSIASGSETNKRCIEAAGGVEFLASIVMNSIDSAVTSPEDNGFELRTSAGDE 177
+ ++RL+ +A SE N+ I E L I+ I E +
Sbjct: 124 RAAAIRRLRGLARDSEKNRVLIAGHNAREILVRILFADI-------ETTSLSSELVSESL 176
Query: 178 ALSILHHLNLSEPGLKTLLSFKNGDFIASLTRVMQKGFFESRAYAVFLLKSMSGIADSVQ 237
AL +L H+ +E + + S + + +TR++ E R A L++ + A S+
Sbjct: 177 ALLVLLHMTETE--CEAVAS--DPSRVGFMTRLLFDSSIEIRVNAAALIEMVLTGAKSMD 232
Query: 238 L---FNLKTEFFVELVQVLRDEI-SLKATKATIQTLIQVCPLGRNRVKAVDAGSVFVLTE 293
L + F ++ +L++ I S +A K I+ + +C + + R A+ AG+ +L +
Sbjct: 233 LKLIISGSDSIFEGVLDLLKNPISSRRALKIGIKAIFALCLVKQTRHLAISAGAPGILID 292
Query: 294 LLLNCKERKPCEMMLVLLDLLCQCAEGRAELLSHAAGLAVVSKKILRVSTVANDRAVRIL 353
L +R E L ++LLC+ EG A HA + ++ K ILRVS A + A L
Sbjct: 293 RLAADFDRCDTERGLATVELLCRLPEGCAAFGEHALTVPLMVKTILRVSDRATEYAAGAL 352
Query: 354 LSVCRFSASPSVLQEMLKLGVVAKLCLVLQVDSGSKAKEKAREILKLHGKAW 405
L++C +A E G+V +L L++Q D +AK KA+ +LKL +W
Sbjct: 353 LALC--TAEERCRDEAAAAGLVTQLLLLVQSDCTERAKRKAQMLLKLLRDSW 402
>AT5G37490.1 | Symbols: | ARM repeat superfamily protein |
chr5:14887744-14889051 FORWARD LENGTH=435
Length = 435
Score = 166 bits (419), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 127/410 (30%), Positives = 220/410 (53%), Gaps = 39/410 (9%)
Query: 3 EVDVPSYFLCPISLEIMKDPVTVTTGITYDRESIEKWLFSKNNTKTITCPVTKQPLSDCS 62
E+ +P F CPIS+++MKDPV ++TGITYDR SIE W+ S N TCPVT L+
Sbjct: 28 EITIPPEFQCPISIDLMKDPVIISTGITYDRVSIETWINSGNK----TCPVTNTVLT--- 80
Query: 63 ADLTLTPNHTLRRLIQAWCTMNASHGVERIPTPKPPV---NKTQISKLLKDASRSPLMQI 119
PNHT+R++IQ WC S ++RIPTP+ P+ +IS+ L A+R +
Sbjct: 81 -TFDQIPNHTIRKMIQGWCVEKGSPLIQRIPTPRVPLMPCEVYEISRKLSSATRRGDYE- 138
Query: 120 KC---LQRLKSIASGSETNKRCIEAAGGVEFLASIVMNSIDSAVTSPED--NGFELRTSA 174
KC ++++K + SE N++C+ NS+ + D +G E T
Sbjct: 139 KCGVIIEKIKKLGDESEKNRKCVNE------------NSVGWVLCDCFDKFSGDEKLTFM 186
Query: 175 GDEALSILHHL-NLSEPGLKTLLSFKNGDFIASLTRVMQKGFFESRAYAVFLLKSMSGIA 233
+E LS+L + + G+ L S + +A L + R A F++K + +
Sbjct: 187 LNEILSLLTWMFPIGLEGISKLASATSFRCVAGLLKSTDDSV---RQNAAFIMKEILSLD 243
Query: 234 DS-VQLFNLKTEFFVELVQVLRDEISLKATKATIQTLIQVCPLGRNRVKA--VDAGSVFV 290
++ V F ++ LV+++RD +S +TK+++ + Q+ L + + + ++ G V +
Sbjct: 244 ETRVHSFAVENGVAEALVKLIRDSVSSSSTKSSLIAIYQMV-LQKPEIASEFLEIGLVSI 302
Query: 291 LTELLLNCKERKPCEMMLVLLDLLCQCAEGRAELLSHAAGLAVVSKKILRVSTVANDRAV 350
E++++ E CE L +LD +C+ GR E+ +A + ++ KKI +VS +A ++
Sbjct: 303 TVEMIVDA-ENSVCEKALAVLDAICETEHGREEVRKNALVMPLLVKKIAKVSELATRSSM 361
Query: 351 RILLSVCRFSASPSVLQEMLKLGVVAKLCLVLQVDSGSKAKEKAREILKL 400
++L + + + +V ++ ++LG K+ LVLQV G + KEKA E+LK+
Sbjct: 362 SMILKLWKTGNTVAV-EDAVRLGAFQKVLLVLQVGYGEETKEKATELLKM 410
>AT1G66160.1 | Symbols: ATCMPG1, CMPG1 | CYS, MET, PRO, and GLY
protein 1 | chr1:24637218-24638513 FORWARD LENGTH=431
Length = 431
Score = 162 bits (410), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 126/421 (29%), Positives = 204/421 (48%), Gaps = 58/421 (13%)
Query: 3 EVDVPSYFLCPISLEIMKDPVTVTTGITYDRESIEKWLFSKNNTKTITCPVTKQPLSDCS 62
E+ +PS F CPIS E+MKDPV + +GITYDRE+IEKW S TCPVT L+
Sbjct: 30 EITIPSQFQCPISYELMKDPVIIASGITYDRENIEKWFESGYQ----TCPVTNTVLT--- 82
Query: 63 ADLTLTPNHTLRRLIQAWCTMNASHGVERIPTPKPPVNKTQISKL---LKDASRSPLMQ- 118
L PNHT+RR+IQ WC + G+ERIPTP+ PV Q+S++ L A+R
Sbjct: 83 -SLEQIPNHTIRRMIQGWCGSSLGGGIERIPTPRVPVTSHQVSEICERLSAATRRGDYAA 141
Query: 119 -IKCLQRLKSIASGSETNKRCIEAAGGVEFL------------ASIVMNSIDSAVTSPED 165
++ + ++ + SE N++C++ G L AS+++ S +T
Sbjct: 142 CMEMVTKMTRLGKESERNRKCVKENGAGLVLCVCFDAFSENANASLLLEETVSVLTWMLP 201
Query: 166 NGFELRTSAGDEALSILHHLNLSEPGLKTLLSFKNGDFIASLTRVMQKGFFESRAYAVFL 225
G E G L+ N + + +NGD A+ + K E V
Sbjct: 202 IGLE-----GQSKLTTTSSFN------RLVELLRNGDQNAAF---LIKELLELNVTHVHA 247
Query: 226 LKSMSGIADSVQLFNLKTEFFVELVQVLRDEISLKATKATIQTLIQVCPLGRNRVKAVDA 285
L ++G+ ++ + + RD + + +I +I +R +D
Sbjct: 248 LTKINGVQEAF------------MKSINRDSTCVNSL-ISIHHMILTNQETVSRFLELDL 294
Query: 286 GSVFVLTELLLNCKERKPCEMMLVLLDLLCQCAEGRAELLSHAAGLAVVSKKILRVSTVA 345
V + E+L++ E CE L +L+++C+ EGR ++ + + ++ KKIL++S
Sbjct: 295 --VNITVEMLVD-SENSVCEKALTVLNVICETKEGREKVRRNKLVIPILVKKILKISEKK 351
Query: 346 NDRAVRILLSVCRFSASPSVLQEMLKLGVVAKLCLVLQVDSGSKAKEKAREILKLHGKAW 405
+ V ++ VC+ S S ++E L+LG KL ++LQV G KEK E+LK+ K
Sbjct: 352 D--LVSVMWKVCK-SGDGSEVEEALRLGAFKKLVVMLQVGCGEGTKEKVTELLKMMNKVM 408
Query: 406 R 406
+
Sbjct: 409 K 409
>AT1G66160.2 | Symbols: ATCMPG1, CMPG1 | CYS, MET, PRO, and GLY
protein 1 | chr1:24637218-24638513 FORWARD LENGTH=415
Length = 415
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 116/423 (27%), Positives = 192/423 (45%), Gaps = 78/423 (18%)
Query: 3 EVDVPSYFLCPISLEIMKDPVTVTTGITYDRESIEKWLFSKNNTKTITCPVTKQPLSDCS 62
E+ +PS F CPIS E+MKDP W S T CPVT L+
Sbjct: 30 EITIPSQFQCPISYELMKDP----------------WFESGYQT----CPVTNTVLTS-- 67
Query: 63 ADLTLTPNHTLRRLIQAWCTMNASHGVERIPTPKPPVNKTQISKL---LKDASR----SP 115
L PNHT+RR+IQ WC + G+ERIPTP+ PV Q+S++ L A+R +
Sbjct: 68 --LEQIPNHTIRRMIQGWCGSSLGGGIERIPTPRVPVTSHQVSEICERLSAATRRGDYAA 125
Query: 116 LMQIKCLQRLKSIASGSETNKRCIEAAGGVEFL------------ASIVMNSIDSAVTSP 163
M++ + ++ + SE N++C++ G L AS+++ S +T
Sbjct: 126 CMEM--VTKMTRLGKESERNRKCVKENGAGLVLCVCFDAFSENANASLLLEETVSVLTWM 183
Query: 164 EDNGFELRTSAGDEALSILHHLNLSEPGLKTLLSFKNGDFIASLTRVMQKGFFESRAYAV 223
G E G L+ N + + +NGD A+ + K E V
Sbjct: 184 LPIGLE-----GQSKLTTTSSFN------RLVELLRNGDQNAAF---LIKELLELNVTHV 229
Query: 224 FLLKSMSGIADSVQLFNLKTEFFVELVQVLRDEISLKATKATIQTLIQVCPLGRNRVKAV 283
L ++G+ ++ + + RD + + +I +I +R +
Sbjct: 230 HALTKINGVQEAF------------MKSINRDSTCVNSL-ISIHHMILTNQETVSRFLEL 276
Query: 284 DAGSVFVLTELLLNCKERKPCEMMLVLLDLLCQCAEGRAELLSHAAGLAVVSKKILRVST 343
D V + E+L++ E CE L +L+++C+ EGR ++ + + ++ KKIL++S
Sbjct: 277 DL--VNITVEMLVD-SENSVCEKALTVLNVICETKEGREKVRRNKLVIPILVKKILKISE 333
Query: 344 VANDRAVRILLSVCRFSASPSVLQEMLKLGVVAKLCLVLQVDSGSKAKEKAREILKLHGK 403
+ V ++ VC+ S S ++E L+LG KL ++LQV G KEK E+LK+ K
Sbjct: 334 KKD--LVSVMWKVCK-SGDGSEVEEALRLGAFKKLVVMLQVGCGEGTKEKVTELLKMMNK 390
Query: 404 AWR 406
+
Sbjct: 391 VMK 393
>AT3G18710.1 | Symbols: PUB29, ATPUB29 | plant U-box 29 |
chr3:6434234-6435481 REVERSE LENGTH=415
Length = 415
Score = 125 bits (313), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 119/413 (28%), Positives = 200/413 (48%), Gaps = 44/413 (10%)
Query: 4 VDVPSYFLCPISLEIMKDPVTVTTGITYDRESIEKWLFSKNNTKTITCPVTKQPLSDCSA 63
+ VPS+F CPISL++M+ PV++ TG+TYDR SI++WL NN TCP T Q L +
Sbjct: 10 ITVPSFFKCPISLDVMRSPVSLCTGVTYDRASIQRWLDGGNN----TCPATMQLLK--TK 63
Query: 64 DLTLTPNHTLRRLIQAWC-TMNASHGVERIPTPKPPVNKTQISKLLKDASRSPLMQIKCL 122
D PN TL+RLI W ++ H + P PP + +K + LM ++ L
Sbjct: 64 D--FVPNLTLQRLINIWSDSIGRRHNGDS-PVLNPPSGREVPTKEEVNVLLERLMSLENL 120
Query: 123 QRLKSIASGSETNKRCIEAAGGVEFLASIVMNSIDSAVTSPEDNGFELRTSAGDEALSIL 182
++ S++N+ + + +EF+ +V + + EL A+ IL
Sbjct: 121 MKIVRFVKDSDSNREFL--SKKMEFVPMLV------DIIRTKKTKIELVIM----AIRIL 168
Query: 183 HHLNLSEPGLKTL-LSFKNGDFIASLTRVMQKGFFESRAYAVFLLKSMSGIADSVQLFNL 241
+ + L L L+ GD + ++ +Q+G ES+ +V +L +S A S +
Sbjct: 169 DSIKVDRERLSNLMLANDGGDCLTAILLAIQRGNLESKIESVRVLDWISFDAKSKLMIAE 228
Query: 242 KTEFFVELVQVLRDEISLKAT------KATIQTLIQVCPLGRNRVKAVDAGSV-----FV 290
+ E+++ IS+ + +A++ LI + R R K + A ++ +
Sbjct: 229 RDGVLTEMMK----SISITESSDPSLIEASLSFLITISKSKRVRSKLIAAKAITKIKDIL 284
Query: 291 LTELLLNCKERKPCEMMLVLLDLLCQCAEGRAELLSHAAGLAV--VSKKILRVSTVANDR 348
LTE L N E L LL+ L EGR E+ G V V KK+L+VST A +
Sbjct: 285 LTETLTNV---AVTEKSLKLLETLSSKREGRLEICGDDNGRCVEGVVKKLLKVSTTATEH 341
Query: 349 AVRILLSVCR-FSASPSVLQEMLKLGVVAKLCLVLQVDSGSKAKEKAREILKL 400
AV IL +C F +V + + + V KL +V+Q + + ++ A++++K+
Sbjct: 342 AVTILWCLCYVFREDKTVEETVERSNGVTKLLVVIQSNCSAMVRQMAKDLIKV 394
>AT1G23030.1 | Symbols: | ARM repeat superfamily protein |
chr1:8156745-8158842 FORWARD LENGTH=612
Length = 612
Score = 121 bits (304), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 116/413 (28%), Positives = 200/413 (48%), Gaps = 49/413 (11%)
Query: 2 DEVDVPSYFLCPISLEIMKDPVTVTTGITYDRESIEKWLFSKNNTKTITCPVTKQPLSDC 61
D++ +P FLCP+SLE+MKDPV V TG TY+R I++W+ N +TCP T+Q L
Sbjct: 237 DKLTIPVDFLCPVSLELMKDPVIVATGQTYERAYIQRWIDCGN----LTCPKTQQKLE-- 290
Query: 62 SADLTLTPNHTLRRLIQAWCTMNASHGVERIPTPKPPVN-KTQISKLL--------KDAS 112
+ TLTPN+ LR LI WC A H +E+ P +N +T+ S + + +S
Sbjct: 291 --NFTLTPNYVLRSLISRWC---AEHNIEQ---PAGYINGRTKNSGDMSVIRALVQRLSS 342
Query: 113 RSPLMQIKCLQRLKSIASGSETNKRCIEAAGGVEFLASIVMNSIDSAVTSPEDNGFELRT 172
RS + + ++S++ S N+ I AG + L +++ + ED
Sbjct: 343 RSTEDRRNAVSEIRSLSKRSTDNRILIAEAGAIPVLVNLL---------TSED------V 387
Query: 173 SAGDEALSILHHLNLSEPGLKTLLSFKNGDFIASLTRVMQKGFFESRAYAVFLLKSMSGI 232
+ + A++ + +L++ E K L+ F + S+ +V++ G E+R A L S+S +
Sbjct: 388 ATQENAITCVLNLSIYENN-KELIMFAGA--VTSIVQVLRAGTMEARENAAATLFSLS-L 443
Query: 233 ADSVQLFNLKTEFFVELVQVLRDEISLKATKATIQTLIQVCPLGRNRVKAVDAGSVFVLT 292
AD ++ + LV +L + + K L +C N+ +AV AG V L
Sbjct: 444 ADENKIIIGGSGAIPALVDLLENGTP-RGKKDAATALFNLCIYHGNKGRAVRAGIVTALV 502
Query: 293 ELLLNCKERKPCEMMLVLLDLLCQCAEGRAELLSHAAGLAVVSKKILRVSTVAN-DRAVR 351
++L + + + L +L +L + ++ ++ A++ IL+ N + A
Sbjct: 503 KMLSDSTRHRMVDEALTILSVLANNQDAKSAIVKANTLPALIG--ILQTDQTRNRENAAA 560
Query: 352 ILLSVCRFSASPSVLQEMLKLGVVAKLCLVLQVDSGSKAKEKAREILKLHGKA 404
ILLS+C+ L + +LG V L + L + + K KA +L+L KA
Sbjct: 561 ILLSLCKRDTEK--LITIGRLGAVVPL-MDLSKNGTERGKRKAISLLELLRKA 610
>AT3G46510.1 | Symbols: PUB13, ATPUB13 | plant U-box 13 |
chr3:17124106-17126539 REVERSE LENGTH=660
Length = 660
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 121/410 (29%), Positives = 194/410 (47%), Gaps = 56/410 (13%)
Query: 6 VPSYFLCPISLEIMKDPVTVTTGITYDRESIEKWLFSKNNTKTITCPVTKQPLSDCSADL 65
+P F CPISLE+M+DPV V++G TY+R IEKW+ ++ TCP T+Q L+
Sbjct: 256 IPDDFRCPISLEMMRDPVIVSSGQTYERTCIEKWIEGGHS----TCPKTQQALTST---- 307
Query: 66 TLTPNHTLRRLIQAWCTMNASHGVERIPTPKPP--VNKTQISKLLKDASRSPLMQIKCLQ 123
TLTPN+ LR LI WC N I PKPP + ++S SP K
Sbjct: 308 TLTPNYVLRSLIAQWCEAN------DIEPPKPPSSLRPRKVSSF-----SSPAEANKIED 356
Query: 124 RLKSIASGSETNKRCIEAAGGVEFLASIVMNSIDSAVTSPEDNGFEL--------RTSAG 175
+ +A G+ ++R AAG + LA + D+ V E L +
Sbjct: 357 LMWRLAYGNPEDQRS--AAGEIRLLAK---RNADNRVAIAEAGAIPLLVGLLSTPDSRIQ 411
Query: 176 DEALSILHHLNLSEPGLKTLLSFKNGDFIASLTRVMQKGFFESRAYAVFLLKSMSGIADS 235
+ +++ L +L++ E ++S I + +V++KG E+R A L S+S I ++
Sbjct: 412 EHSVTALLNLSICENNKGAIVS---AGAIPGIVQVLKKGSMEARENAAATLFSLSVIDEN 468
Query: 236 -VQLFNLKTEFFVELVQVLRDEISLKATKATIQTLIQVCPLGRNRVKAVDAGSVFVLTEL 294
V + L + + VL +E + + K L +C N+ KA+ AG + LT L
Sbjct: 469 KVTIGALGA---IPPLVVLLNEGTQRGKKDAATALFNLCIYQGNKGKAIRAGVIPTLTRL 525
Query: 295 LLNCKERKPCEMM----LVLLDLLCQCAEGRAELLSHAAGLAVVSKKILRVSTVAN-DRA 349
L +P M L +L +L EG+A + S A ++V + +R + N + A
Sbjct: 526 LT-----EPGSGMVDEALAILAILSSHPEGKAIIGSSDAVPSLV--EFIRTGSPRNRENA 578
Query: 350 VRILLSVCRFSASPSVLQEMLKLGVVAKLCLVLQVDSGSKAKEKAREILK 399
+L+ +C S P L E KLG++ L + L + + K KA ++L+
Sbjct: 579 AAVLVHLC--SGDPQHLVEAQKLGLMGPL-IDLAGNGTDRGKRKAAQLLE 625
>AT3G49810.1 | Symbols: | ARM repeat superfamily protein |
chr3:18474936-18476282 REVERSE LENGTH=448
Length = 448
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 112/414 (27%), Positives = 185/414 (44%), Gaps = 59/414 (14%)
Query: 1 MDEVDVPSYFLCPISLEIMKDPVTVTTGITYDRESIEKWLFSKNNTKTITCPVTKQPLSD 60
+D D+PS F+CPISLE M+DPVT+ TG TY+R +I KW N +TCP T Q L D
Sbjct: 59 LDLQDIPSVFICPISLEPMQDPVTLCTGQTYERLNIHKWF----NLGHLTCPTTMQELWD 114
Query: 61 CSADLTLTPNHTLRRLIQAWCTMNASHGVERIPTPKPPVNKTQISKLLKDASRSPLMQIK 120
T+TPN TL LI W + + + + + +I LK A ++
Sbjct: 115 D----TVTPNKTLHHLIYTW--FSQKYVLMKKRSEDVQGRAIEILGTLKKAKGQA--RVH 166
Query: 121 CLQRLKSIASGSETNKRCIEAAGGVEFLASIVMNSIDSAVTSPEDNGFELRTSAGDEALS 180
L LK I ++ + GGV ++S++ AV G E ++
Sbjct: 167 ALSELKQIVIAHLMARKTVVEEGGVSVISSLLGPFTSHAV--------------GSEVVA 212
Query: 181 ILHHLNLSEPGLKTLLSFKNGDFIASL-------TRV----MQKGFFESRAYAVFLLKSM 229
IL L+L L+ I + T++ + +G E + + L+ S
Sbjct: 213 ILVSLDLDSDSKSGLMQPAKVSLIVDMLNDGSNETKINCARLIRGLVEEKGFRAELVSSH 272
Query: 230 SGIADSVQLFNLKTEFFVELVQVLRDEISLKATKATIQTLIQVCPLGRNRVKAVDAGSVF 289
S V L+++++D+ ++ L + + R V G+V
Sbjct: 273 S--------------LLVGLMRLVKDKRHRNGVSPALRLLKPISVHKQVRSLMVSIGAVP 318
Query: 290 VLTELLLNCKERKPCEMMLVLLDLLCQCAEGRAELLSHAAGLAVVSKKILRVSTVANDRA 349
L ++L + + + E+ L +LD LC EGR + A + + ++RVS + A
Sbjct: 319 QLVDILPSL-DPECLELALFVLDALCTDVEGRVAVKDSANTIPYTVRVLMRVSENCTNYA 377
Query: 350 VRILLSVCRFS---ASPSVLQEMLKLGVVAKLCLVLQVDSGSKAKEKAREILKL 400
+ IL SVC+ + SP ++ +G+ AKL LV+Q + K+++ E+LKL
Sbjct: 378 LSILWSVCKLAPEECSPLAVE----VGLAAKLLLVIQSGCDAALKQRSAELLKL 427
>AT5G09800.1 | Symbols: | ARM repeat superfamily protein |
chr5:3043123-3044352 REVERSE LENGTH=409
Length = 409
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 107/396 (27%), Positives = 183/396 (46%), Gaps = 20/396 (5%)
Query: 6 VPSYFLCPISLEIMKDPVTVTTGITYDRESIEKWLFSKNNTKTITCPVTKQPLSDCSADL 65
VP +F CPISL++MK PV+++TG+TYDR SI++WL NN TCP T Q L +
Sbjct: 11 VPCFFKCPISLDVMKSPVSLSTGVTYDRVSIQRWLDDGNN----TCPATMQILQNKE--- 63
Query: 66 TLTPNHTLRRLIQAWCTMNASHGVERIPTPKPPVNKTQISKLLKDASRSPLMQIKCLQRL 125
PN TL RLI W S + R + P + T + A ++ ++
Sbjct: 64 -FVPNLTLHRLIDHW-----SDSINRRADSESPESDTPTRDEINAAIERFRIENDARSKI 117
Query: 126 KSIASGSETNKRCIEAAGGVEFLASIVMNSIDSAVTSPEDNGFELRTSAGDEALSILHHL 185
A S+ N+ + AG +F+A +V DS S D+ L A + LS++
Sbjct: 118 LRFARESDENREFL--AGKDDFVAMLVDLISDSRNFS--DSQLLLVGEAV-KILSMIRRK 172
Query: 186 NLSEPGLKTLLSFKNGDFIASLTRVMQKGFFESRAYAVFLLKSMSGIADSVQLFNLKTEF 245
L L+ GD + S ++++G + + +L+ ++ A+S +
Sbjct: 173 IFDRRRLSNLILTNGGDCLTSFFLLIKRGNPKLKIDCSAVLEFIAVDAESKLIIAKGEGL 232
Query: 246 FVELVQVLRDEISLKATKATIQTLIQVCPLGRNRVKAVDAGSVFVLTELLLN-CKERKPC 304
E+++++ + +A + LI + R ++ + V LT LL +
Sbjct: 233 VTEIIKLISSDSDSSLIEANLSLLIAIASSKRVKLALIREKLVTKLTSLLTDPTTSVSVT 292
Query: 305 EMMLVLLDLLCQCAEGRAELLSHAAGLAVVSKKILRVSTVANDRAVRILLSVCRFSASPS 364
E L LL+ + C EGR+E+ VV+ K+++VST A + AV +L SVC
Sbjct: 293 EKCLKLLEAISSCKEGRSEICDGVCVETVVN-KLMKVSTAATEHAVTVLWSVCYLFKEKK 351
Query: 365 VLQEMLKLGVVAKLCLVLQVDSGSKAKEKAREILKL 400
++++ V K+ L+LQ + + ++LK+
Sbjct: 352 AQDAVIRINGVTKILLLLQSNCSLTVRHMLTDLLKV 387
>AT5G64660.1 | Symbols: ATCMPG2, CMPG2 | CYS, MET, PRO, and GLY
protein 2 | chr5:25842119-25843381 REVERSE LENGTH=420
Length = 420
Score = 111 bits (278), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 112/414 (27%), Positives = 189/414 (45%), Gaps = 40/414 (9%)
Query: 4 VDVPSYFLCPISLEIMKDPVTVTTGITYDRESIEKWLFSKNNTKTITCPVTKQPLSDCSA 63
+ VP++F CPISL++MK PV++ TG+TYDR SI++WL NN TCP T Q L +
Sbjct: 8 ITVPTFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDGGNN----TCPATMQILQNKD- 62
Query: 64 DLTLTPNHTLRRLIQAW--------CTMNASHGVERIPTPKPPVNKTQISKLLKDASRSP 115
PN TL+RLI+ W C +A +++ +I K +D R
Sbjct: 63 ---FIPNRTLQRLIEIWSDSVRRRTCVESAELAAPTRDEIADAIDRVKIEKEERD-DREV 118
Query: 116 LMQIKCLQRLKSIASGSETNKRCIEAAGGVEFLASIV--MNSIDSAVTSPEDNGFELRTS 173
L +I + G E++ AG +F+ +V +N +D TS ++
Sbjct: 119 LSKI--------VRFGRESDDNRGFLAGKDDFVKLLVDLINQVDFETTSAA------KSL 164
Query: 174 AGDEALSILHHL--NLSEPGLKTLLSFKNG-DFIASLTRVMQKGFFESRAYAVFLLKSMS 230
EA+ IL + +S+ + L NG D ++ + + + G E + LL+ ++
Sbjct: 165 VVQEAVKILSTIRSKVSDRRRFSNLILTNGRDRLSVIVYLFKTGNVELKIDCAGLLEFIA 224
Query: 231 GIADSVQLFNLKTEFFVELVQVLRDEISLKATKATIQTLIQVCPLGR---NRVKAVDAGS 287
A+S L + EL++ + + L ++++ LI + R N ++ G
Sbjct: 225 VDAESKLLIAERDGLITELMKSISKDSDLSLIESSLSCLIAISSPKRVKLNLLREKLIGD 284
Query: 288 VFVLTELLLNCKERKPCEMMLVLLDLLCQCAEGRAELL-SHAAGLAVVSKKILRVSTVAN 346
V L + E L LL++L EGR+E+ L V KK+++VST A
Sbjct: 285 VTKLLSDSTSSLSVSVTEKCLKLLEILASTKEGRSEICGGDGECLKTVVKKLMKVSTAAT 344
Query: 347 DRAVRILLSVCRFSASPSVLQEMLKLGVVAKLCLVLQVDSGSKAKEKAREILKL 400
+ AV +L SV L+ + + V K+ L+LQ + + ++LK+
Sbjct: 345 EHAVTVLWSVSYLFKEDKALEAVTSVNGVTKILLLLQSNCSPAVRRMLTDLLKV 398
>AT1G71020.2 | Symbols: | ARM repeat superfamily protein |
chr1:26790825-26792357 REVERSE LENGTH=480
Length = 480
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 114/422 (27%), Positives = 195/422 (46%), Gaps = 54/422 (12%)
Query: 2 DEVDVPSYFLCPISLEIMKDPVTVTTGITYDRESIEKWLFSKNNTKTITCPVTKQPLSDC 61
D + +P FLCPISLE+MKDP V+TG TY+R I++W+ N ++CP T+Q L
Sbjct: 91 DNLTIPEDFLCPISLELMKDPAIVSTGQTYERSFIQRWIDCGN----LSCPKTQQKLE-- 144
Query: 62 SADLTLTPNHTLRRLIQAWCTMNASHGVERIPTPKPPVN-KTQISK-------------- 106
+ TLTPN+ LR LI WCT H +E+ P +N +T+ S
Sbjct: 145 --NFTLTPNYVLRSLISQWCT---KHNIEQ---PGGYMNGRTKNSDGSFRDLSGDMSAIR 196
Query: 107 --LLKDASRSPLMQIKCLQRLKSIASGSETNKRCIEAAGGVEFLASIVMNSIDSAVTSPE 164
+ K +S+S + + ++S++ S N+ I AG + L ++ + D
Sbjct: 197 ALVCKLSSQSIEDRRTAVSEIRSLSKRSTDNRILIAEAGAIPVLVKLLTSDGD------- 249
Query: 165 DNGFELRTSAGDEALSILHHLNLSEPGLKTLLSFKNGDFIASLTRVMQKGFFESRAYAVF 224
T + A++ + +L++ E K L+ + S+ V++ G E+R A
Sbjct: 250 -------TETQENAVTCILNLSIYEHN-KELIMLAGA--VTSIVLVLRAGSMEARENAAA 299
Query: 225 LLKSMSGIADSVQLFNLKTEFFVELVQVLRDEISLKATKATIQTLIQVCPLGRNRVKAVD 284
L S+S +AD ++ + + LV +L+ S++ K L +C N+ +AV
Sbjct: 300 TLFSLS-LADENKIIIGASGAIMALVDLLQ-YGSVRGKKDAATALFNLCIYQGNKGRAVR 357
Query: 285 AGSVFVLTELLLNCKERKPCEMMLVLLDLLCQCAEGRAELLSHAAGLAVVSKKILRVSTV 344
AG V L ++L + + + L +L +L + +L A + + + +
Sbjct: 358 AGIVKPLVKMLTDSSSERMADEALTILSVLASNQVAKTAIL-RANAIPPLIDCLQKDQPR 416
Query: 345 ANDRAVRILLSVCRFSASPSVLQEMLKLGVVAKLCLVLQVDSGSKAKEKAREILKLHGKA 404
+ A ILL +C+ L + +LG V L + L D +AK KA +L+L K+
Sbjct: 417 NRENAAAILLCLCKRDTEK--LISIGRLGAVVPL-MELSRDGTERAKRKANSLLELLRKS 473
Query: 405 WR 406
R
Sbjct: 474 SR 475
>AT1G71020.1 | Symbols: | ARM repeat superfamily protein |
chr1:26790825-26793105 REVERSE LENGTH=628
Length = 628
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 114/419 (27%), Positives = 192/419 (45%), Gaps = 48/419 (11%)
Query: 2 DEVDVPSYFLCPISLEIMKDPVTVTTGITYDRESIEKWLFSKNNTKTITCPVTKQPLSDC 61
D + +P FLCPISLE+MKDP V+TG TY+R I++W+ N ++CP T+Q L
Sbjct: 239 DNLTIPEDFLCPISLELMKDPAIVSTGQTYERSFIQRWIDCGN----LSCPKTQQKLE-- 292
Query: 62 SADLTLTPNHTLRRLIQAWCT----------MNA----SHGVERIPTPKPPVNKTQISKL 107
+ TLTPN+ LR LI WCT MN S G R + + + KL
Sbjct: 293 --NFTLTPNYVLRSLISQWCTKHNIEQPGGYMNGRTKNSDGSFRDLSGDMSAIRALVCKL 350
Query: 108 LKDASRSPLMQIKCLQRLKSIASGSETNKRCIEAAGGVEFLASIVMNSIDSAVTSPEDNG 167
+S+S + + ++S++ S N+ I AG + L ++ + D
Sbjct: 351 ---SSQSIEDRRTAVSEIRSLSKRSTDNRILIAEAGAIPVLVKLLTSDGD---------- 397
Query: 168 FELRTSAGDEALSILHHLNLSEPGLKTLLSFKNGDFIASLTRVMQKGFFESRAYAVFLLK 227
T + A++ + +L++ E K L+ + S+ V++ G E+R A L
Sbjct: 398 ----TETQENAVTCILNLSIYEHN-KELIMLAGA--VTSIVLVLRAGSMEARENAAATLF 450
Query: 228 SMSGIADSVQLFNLKTEFFVELVQVLRDEISLKATKATIQTLIQVCPLGRNRVKAVDAGS 287
S+S +AD ++ + + LV +L+ S++ K L +C N+ +AV AG
Sbjct: 451 SLS-LADENKIIIGASGAIMALVDLLQ-YGSVRGKKDAATALFNLCIYQGNKGRAVRAGI 508
Query: 288 VFVLTELLLNCKERKPCEMMLVLLDLLCQCAEGRAELLSHAAGLAVVSKKILRVSTVAND 347
V L ++L + + + L +L +L + +L A + + + + +
Sbjct: 509 VKPLVKMLTDSSSERMADEALTILSVLASNQVAKTAIL-RANAIPPLIDCLQKDQPRNRE 567
Query: 348 RAVRILLSVCRFSASPSVLQEMLKLGVVAKLCLVLQVDSGSKAKEKAREILKLHGKAWR 406
A ILL +C+ L + +LG V L + L D +AK KA +L+L K+ R
Sbjct: 568 NAAAILLCLCKRDTEK--LISIGRLGAVVPL-MELSRDGTERAKRKANSLLELLRKSSR 623
>AT5G65920.1 | Symbols: | ARM repeat superfamily protein |
chr5:26364323-26365657 REVERSE LENGTH=444
Length = 444
Score = 108 bits (269), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 112/402 (27%), Positives = 183/402 (45%), Gaps = 43/402 (10%)
Query: 5 DVPSYFLCPISLEIMKDPVTVTTGITYDRESIEKWLFSKNNTKTITCPVTKQPLSDCSAD 64
++PS F+CPISLE M+DPVT+ TG TY+R +I KW N TCP T Q L D D
Sbjct: 59 EIPSVFICPISLEPMQDPVTLCTGQTYERSNILKWF----NIGHCTCPTTMQELWD---D 111
Query: 65 LTLTPNHTLRRLIQAWCTMNASHGVERIPTPKPPVNKTQISKLLKDASRSPLMQIKCLQR 124
L +TPN TL +LI W + + + + + +I L+ A ++ L
Sbjct: 112 L-VTPNKTLHQLIYTW--FSQKYVLMKKRSEDVQGRAIEILGTLRKAKGKA--KVHALSE 166
Query: 125 LKSIASGSETNKRCIEAAGGVEFLASIVMNSIDSAVTSPEDNGFELRTSAGDEALSILHH 184
LK + K+ + GGV V++S+ S TS + G EA++IL +
Sbjct: 167 LKQVVMAHAIAKKTVVDEGGV-----FVISSLLSPFTS---------HAVGSEAIAILVN 212
Query: 185 LNLSEPGLKTLLSFKNGDFIASLTRVMQKGFFESRAYAVFLLKSMSGIADSVQLFNLKTE 244
L L L+ ++ + ++ G E++ L+ + V+ + E
Sbjct: 213 LELDSDSKAGLMQPAR---VSLMVDMLNDGSIETKINCARLIGRL------VEEKGFRAE 263
Query: 245 ------FFVELVQVLRDEISLKATKATIQTLIQVCPLGRNRVKAVDAGSVFVLTELLLNC 298
V L+++++D + L V + R V G+V L + +L C
Sbjct: 264 LVSSHSLLVGLMRLVKDRRRRNGVSPALTLLKSVSVHKQVRNLLVRIGAVPQLVD-VLPC 322
Query: 299 KERKPCEMMLVLLDLLCQCAEGRAELLSHAAGLAVVSKKILRVSTVANDRAVRILLSVCR 358
+ + E L +LD LC +EGR L + + +++VS + A+ IL SVC+
Sbjct: 323 LDVECLESALFVLDSLCLESEGRIALKDSVNTIPHTVRLLMKVSEKCTNYAISILWSVCK 382
Query: 359 FSASPSVLQEMLKLGVVAKLCLVLQVDSGSKAKEKAREILKL 400
AS +++G+ AKL LV+Q K+++ E+LKL
Sbjct: 383 L-ASEECSSLAVEVGLAAKLLLVIQSGCDPALKQRSAELLKL 423
>AT2G28830.1 | Symbols: PUB12, AtPUB12 | PLANT U-BOX 12 |
chr2:12367001-12370608 REVERSE LENGTH=962
Length = 962
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 114/410 (27%), Positives = 193/410 (47%), Gaps = 55/410 (13%)
Query: 7 PSYFLCPISLEIMKDPVTVTTGITYDRESIEKWLFSKNNTKTITCPVTKQPLSDCSADLT 66
P F CPISLE+M DPV V++G TY+RE I+KWL + +TCP T++ L ++D+
Sbjct: 257 PEEFRCPISLELMTDPVIVSSGQTYERECIKKWLEGGH----LTCPKTQETL---TSDI- 308
Query: 67 LTPNHTLRRLIQAWCTMNASHGVERIPTPKPPV------------------NKTQISKLL 108
+TPN+ LR LI WC S+G+E P +P + NK + LL
Sbjct: 309 MTPNYVLRSLIAQWC---ESNGIE--PPKRPNISQPSSKASSSSSAPDDEHNKIE-ELLL 362
Query: 109 KDASRSPLMQIKCLQRLKSIASGSETNKRCIEAAGGVEFLASIVMNSIDSAVTSPEDNGF 168
K S+ P + ++ +A + N+ I A+G + L +++ S DS
Sbjct: 363 KLTSQQPEDRRSAAGEIRLLAKQNNHNRVAIAASGAIPLLVNLLTISNDS---------- 412
Query: 169 ELRTSAGDEALSILHHLNLSEPGLKTLLSFKNGDFIASLTRVMQKGFFESRAYAVFLLKS 228
RT + A++ + +L++ + K + + +G + + V+QKG E+R A L S
Sbjct: 413 --RTQ--EHAVTSILNLSICQEN-KGKIVYSSG-AVPGIVHVLQKGSMEARENAAATLFS 466
Query: 229 MSGIADSVQLFNLKTEFFVELVQVLRDEISLKATKATIQTLIQVCPLGRNRVKAVDAGSV 288
+S I ++ + + + L E S + K L +C N+ KAV AG V
Sbjct: 467 LSVIDENK--VTIGAAGAIPPLVTLLSEGSQRGKKDAATALFNLCIFQGNKGKAVRAGLV 524
Query: 289 FVLTELLLNCKERKPCEMMLVLLDLLCQCAEGRAELLSHAAGLAVVSKKILRVSTVANDR 348
VL LL E + L +L +L +G++E + A + V+ I S +
Sbjct: 525 PVLMRLLTE-PESGMVDESLSILAILSSHPDGKSE-VGAADAVPVLVDFIRSGSPRNKEN 582
Query: 349 AVRILLSVCRFSASPSVLQEMLKLGVVAKLCLVLQVDSGSKAKEKAREIL 398
+ +L+ +C ++ L E KLG++ L + + + + K KA ++L
Sbjct: 583 SAAVLVHLCSWNQQH--LIEAQKLGIM-DLLIEMAENGTDRGKRKAAQLL 629
>AT3G54850.1 | Symbols: ATPUB14, PUB14 | plant U-box 14 |
chr3:20321524-20323848 FORWARD LENGTH=632
Length = 632
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 103/360 (28%), Positives = 171/360 (47%), Gaps = 36/360 (10%)
Query: 6 VPSYFLCPISLEIMKDPVTVTTGITYDRESIEKWLFSKNNTKTITCPVTKQPLSDCSADL 65
+P YF CPISLE+MKDPV V+TG TY+R SI+KWL + + TCP +++ L
Sbjct: 248 IPEYFRCPISLELMKDPVIVSTGQTYERSSIQKWLDAGHK----TCPKSQETLLHAG--- 300
Query: 66 TLTPNHTLRRLIQAWCTMNASHGVERIPTPKPPVNKTQISKLLKDASRSPLMQIKCLQRL 125
LTPN+ L+ LI WC S+G+E +P + T+I +S S + L L
Sbjct: 301 -LTPNYVLKSLIALWCE---SNGIE-LPQNQGSCRTTKIGG----SSSSDCDRTFVLSLL 351
Query: 126 KSIASGSETNKRCIEAAGGVEFLASIVMNSIDSAVTSPEDNGF----ELRTS----AGDE 177
+ +A+G+ +R AAG + LA ++D+ V E EL +S +
Sbjct: 352 EKLANGTTEQQRA--AAGELRLLAK---RNVDNRVCIAEAGAIPLLVELLSSPDPRTQEH 406
Query: 178 ALSILHHLNLSEPGLKTLLSFKNGDFIASLTRVMQKGFFESRAYAVFLLKSMSGIADSVQ 237
+++ L +L+++E ++ + I + V++ G E+R A L S+S + D +
Sbjct: 407 SVTALLNLSINEGNKGAIV---DAGAITDIVEVLKNGSMEARENAAATLFSLS-VIDENK 462
Query: 238 LFNLKTEFFVELVQVLRDEISLKATKATIQTLIQVCPLGRNRVKAVDAGSVFVLTELLLN 297
+ L+ +L +E + + K + +C N+ +AV G V LT LL +
Sbjct: 463 VAIGAAGAIQALISLL-EEGTRRGKKDAATAIFNLCIYQGNKSRAVKGGIVDPLTRLLKD 521
Query: 298 CKERKPCEMMLVLLDLLCQCAEGRAELLSHAAGLAVVSKKILRVSTVANDRAVRILLSVC 357
E L +L +L EG+ ++ A + V+ + I S + A IL +C
Sbjct: 522 AGGGMVDE-ALAILAILSTNQEGKT-AIAEAESIPVLVEIIRTGSPRNRENAAAILWYLC 579
>AT5G42340.1 | Symbols: PUB15 | Plant U-Box 15 |
chr5:16928086-16930367 REVERSE LENGTH=660
Length = 660
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 142/287 (49%), Gaps = 34/287 (11%)
Query: 6 VPSYFLCPISLEIMKDPVTVTTGITYDRESIEKWLFSKNNTKTITCPVTKQPLSDCSADL 65
+P FLCPI+LEIM DPV + TG TY++ESI+KW + + TCP T+Q L L
Sbjct: 290 LPHEFLCPITLEIMLDPVIIATGQTYEKESIQKWFDAGHK----TCPKTRQELD----HL 341
Query: 66 TLTPNHTLRRLIQAWCTMNASHGVERIPTPKPP-VNKTQISKLLKDASRSPL-MQIKCLQ 123
+L PN L+ LI WC N E+ +P K ++S L++ S S L Q + ++
Sbjct: 342 SLAPNFALKNLIMQWCEKNNFKIPEKEVSPDSQNEQKDEVSLLVEALSSSQLEEQRRSVK 401
Query: 124 RLKSIASGSETNKRCIEAAGGVEFLASIVMNSIDSAVTSPEDNGFELRTSAGDEALSILH 183
+++ +A + N+ I AG + L ++ S D+G + + A++ L
Sbjct: 402 QMRLLARENPENRVLIANAGAIPLLVQLL---------SYPDSGIQ------ENAVTTLL 446
Query: 184 HLNLSEPGLKTLLSFKNGDFIASLTRVMQKGFFESRAYAVFLLKSMSGIADSVQLFNLKT 243
+L++ E K L+S N I ++ +++ G E+R + L S+S + ++ L
Sbjct: 447 NLSIDEVN-KKLIS--NEGAIPNIIEILENGNREARENSAAALFSLSMLDENKVTIGLSN 503
Query: 244 EF--FVELVQVLRDEISLKATKATIQTLIQVCPLGRNRVKAVDAGSV 288
V+L+Q +L+ K + L + N+ +A+DAG V
Sbjct: 504 GIPPLVDLLQ----HGTLRGKKDALTALFNLSLNSANKGRAIDAGIV 546
>AT4G21350.1 | Symbols: B80, PUB8 | plant U-box 8 |
chr4:11356143-11357267 REVERSE LENGTH=374
Length = 374
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 109/398 (27%), Positives = 181/398 (45%), Gaps = 49/398 (12%)
Query: 5 DVPSYFLCPISLEIMKDPVTVTTGITYDRESIEKWLFSKNNTKTITCPVTKQPLSDCSAD 64
D+P+ F CPISLEIM DPV + +G T+DR SI++W+ S N TCP+TK PLS+
Sbjct: 4 DLPNDFRCPISLEIMSDPVILQSGHTFDRVSIQQWIDSGNR----TCPITKLPLSETP-- 57
Query: 65 LTLTPNHTLRRLIQAWCTMNASHGVERIPTPKPPVNKTQ--------ISKLLKDASRSPL 116
L PNH LR LI +N +H V + +P + IS L+ +S S
Sbjct: 58 -YLIPNHALRSLI-----LNFAH-VSLKESSRPRTQQEHSHSQSQALISTLVSQSS-SNA 109
Query: 117 MQIKCLQRLKSIASGSETNKRCIEAAGGVEFLASIVMNSIDSAVTSPEDNGFELRTSAGD 176
+++ L RL + + +R + +G V ++ +DS ++ L +
Sbjct: 110 SKLESLTRLVRLTKRDSSIRRKVTESGAVR----AALDCVDSCNQVLQEKSLSLLLNLSL 165
Query: 177 EALSILHHLNLSEPGLKTLLSFKNGDFIASLTRVMQKGFFESRAYAVFLLKSMSGIADSV 236
E + ++ GL +G I + V++ G + +A A LL S++ + +
Sbjct: 166 E--------DDNKVGL-----VADG-VIRRIVTVLRVGSPDCKAIAATLLTSLAVVEVNK 211
Query: 237 QLFNLKTEFFVELVQVLRDEISLKATKATIQTLIQVCPLGRNRVKAVDAGSVFVLTELLL 296
+ LV +LR + + K + L +C NR + VD GSV +L E
Sbjct: 212 ATIGSYPDAISALVSLLRVG-NDRERKESATALYALCSFPDNRKRVVDCGSVPILVEAAD 270
Query: 297 NCKERKPCEMMLVLLDLLCQCAEGRAELLSHAAGLAVVSKKILRVSTVANDRAVRILLSV 356
+ ER + +L LL +C GR E +S +G V +LR + + +L+
Sbjct: 271 SGLER-----AVEVLGLLVKCRGGREE-MSKVSGFVEVLVNVLRNGNLKGIQYSLFILN- 323
Query: 357 CRFSASPSVLQEMLKLGVVAKLCLVLQVDSGSKAKEKA 394
C S ++ E+ + GVV ++C + + K + A
Sbjct: 324 CLCCCSGEIVDEVKREGVV-EICFGFEDNESEKIRRNA 360
>AT3G02840.1 | Symbols: | ARM repeat superfamily protein |
chr3:618480-619619 FORWARD LENGTH=379
Length = 379
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 92/333 (27%), Positives = 166/333 (49%), Gaps = 43/333 (12%)
Query: 89 VERIPTPK---PPVNKTQISKLLKDAS-RSPLMQ-IKCLQRLKSIASGSETNKRCIEAAG 143
+ERI +P+ P + +IS+ L++A+ R + ++ + ++K++ G +TNK+C+ G
Sbjct: 40 IERIQSPRVLLTPRDAVEISRRLQNAAAREEYAECLEIVSKIKNLGRGGDTNKKCLVQNG 99
Query: 144 GVEFLASIVMNSIDSAVTSPEDNGFELRTSAGDEALSILHH----------LNLSEPGLK 193
V L+S FE +A D + +L LN SE G
Sbjct: 100 SVLALSSC----------------FERFAAARDGHMRLLEEILFVLSSWLPLNRSE-GFN 142
Query: 194 TLLSFKNGDFIASLTRVMQKGFFESRAYAVFLLKSMSGIADSVQLFNL-KTEFFVE-LVQ 251
+ S + + L R + ++R A F ++ + + D ++ L E E LV+
Sbjct: 143 KMGSTAS---LNCLVRFLNGKDAKTRQNAAFCIREVIAV-DKRYVYALTDVEGACEGLVK 198
Query: 252 VLRDEISLKATKATIQTLIQ-VCPLGRNRVKAVDAGSVFVLTELLLNCKERKPCEMMLVL 310
++RD +S +TKA++ + + + + K V G V ++TE+++N E+ CE LV+
Sbjct: 199 IIRDSVSTSSTKASLMVIYRAISSNDKITEKFVKLGLVELITEMMVNNAEKSVCERSLVV 258
Query: 311 LDLLCQCAEGRAELLSHAAGLAVVSKKILRVSTVANDRAVRILLSVCR----FSASPSVL 366
L+ C +G+ ++L +A + ++ KKILRVS +A +V IL + + +L
Sbjct: 259 LNATCDNEQGKEDVLRNALIVPLLVKKILRVSDLATQCSVSILWKLWKNKKDGECDDRLL 318
Query: 367 QEMLKLGVVAKLCLVLQVDSGSKAKEKAREILK 399
E L++G KL ++LQV K KEKA E+L+
Sbjct: 319 VEALQVGAFEKLLVLLQVGCEDKTKEKASELLR 351
>AT1G29340.1 | Symbols: PUB17, ATPUB17 | plant U-box 17 |
chr1:10264412-10266601 FORWARD LENGTH=729
Length = 729
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 104/413 (25%), Positives = 180/413 (43%), Gaps = 47/413 (11%)
Query: 4 VDVPSYFLCPISLEIMKDPVTVTTGITYDRESIEKWLFSKNNTKTITCPVTKQPLSDCSA 63
+ VP F+CPISL++M DPV ++TG TYDR SI +W+ TCP T Q L D
Sbjct: 303 ITVPKDFVCPISLDLMTDPVIISTGQTYDRNSIARWI----EEGHCTCPKTGQMLMDSR- 357
Query: 64 DLTLTPNHTLRRLIQAWCTMNA-SHGVERIPTPKPP------------VNKTQISKLLKD 110
+ PN L+ LI WCT + S+ E +P NK +S L+K
Sbjct: 358 ---IVPNRALKNLIVQWCTASGISYESEFTDSPNESFASALPTKAAVEANKATVSILIKY 414
Query: 111 -ASRSPLMQIKCLQRLKSIASGSETNKRCIEAAGGVEFLASIVMNSIDSAVTSPEDNGFE 169
A S Q + ++ +A + N+ I AG + L ++ + ++A+
Sbjct: 415 LADGSQAAQTVAAREIRLLAKTGKENRAYIAEAGAIPHLCRLLTS--ENAI--------- 463
Query: 170 LRTSAGDEALSILHHLNLSEPGLKTLLSFKNGDFIASLTRVMQKGF-FESRAYAVFLLKS 228
A + +++ + +L++ E ++ + GD + S+ V+ G E++ A L S
Sbjct: 464 ----AQENSVTAMLNLSIYEKNKSRIM--EEGDCLESIVSVLVSGLTVEAQENAAATLFS 517
Query: 229 MSGIADSVQLFNLKTEFFVELVQVLRDEISLKATKATIQTLIQVCPLGRNRVKAVDAGSV 288
+S + + + + + VE + +L + + K + L + N + ++ G V
Sbjct: 518 LSAVHEYKKRIAIVDQ-CVEALALLLQNGTPRGKKDAVTALYNLSTHPDNCSRMIEGGGV 576
Query: 289 FVLTELLLNCKERKPCEMMLVLLDLLCQCAEGRAELLSHAAGLAVVSKKILRVST-VAND 347
L L N + L LL AE + S AGL ++R T +
Sbjct: 577 SSLVGALKNEGVAEEAAGALALLVRQSLGAEAIGKEDSAVAGLM----GMMRCGTPRGKE 632
Query: 348 RAVRILLSVCRFSASPSVLQEMLKLGVVAKLCLVLQVDSGSKAKEKAREILKL 400
AV LL +CR S +V +++L+ +A L L +A+ KA + ++
Sbjct: 633 NAVAALLELCR-SGGAAVAEKVLRAPAIAGLLQTLLFTGTKRARRKAASLARV 684
>AT5G01830.1 | Symbols: | ARM repeat superfamily protein |
chr5:320983-323007 FORWARD LENGTH=674
Length = 674
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 79/159 (49%), Gaps = 30/159 (18%)
Query: 1 MDEVDVPSYFLCPISLEIMKDPVTVTTGITYDRESIEKWLFSKNNTKTITCPVTKQPLSD 60
+ + ++P+ F CPI+LE+M+DPV V TG TYDRESI+ W+ S +N TCP T Q L
Sbjct: 269 LSDANIPADFRCPITLELMRDPVVVATGQTYDRESIDLWIQSGHN----TCPKTGQVLKH 324
Query: 61 CSADLTLTPNHTLRRLIQAWC-------TMNASHGVERIPTP-KPPVNKTQ------ISK 106
S L PN L+ LI WC + G E P P K V T+ I K
Sbjct: 325 TS----LVPNRALKNLIVLWCRDQKIPFELYGDGGGE--PAPCKEAVEFTKMMVSFLIEK 378
Query: 107 LLKDASRSPLMQIKCLQRLKSIASGSETNKRCIEAAGGV 145
L S + +++ L + ++A + CI AG +
Sbjct: 379 LSVADSNGVVFELRALAKSDTVA------RACIAEAGAI 411
>AT3G07360.1 | Symbols: PUB9, ATPUB9 | plant U-box 9 |
chr3:2354884-2356613 FORWARD LENGTH=460
Length = 460
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 115/417 (27%), Positives = 196/417 (47%), Gaps = 45/417 (10%)
Query: 1 MDEVDVPSYFLCPISLEIMKDPVTVTTGITYDRESIEKWLFSKNNTKTITCPVTKQPLSD 60
++ V P F CP+S E+M+DPV + +G TYD+ I+KWL S N TCP T+Q L
Sbjct: 69 LETVSCPEEFRCPLSNELMRDPVVLASGQTYDKLFIQKWLSSGNR----TCPKTQQVLPH 124
Query: 61 CSADLTLTPNHTLRRLIQAWCTMNASHGVERIPTPKPP-VNKTQ-ISKLLKDASRSPLMQ 118
+ LTPN +R +I WC N G+E P VN+ + +++ ++ S L +
Sbjct: 125 TA----LTPNLLIREMISKWCKKN---GLETKSQYHPNLVNEDETVTRSDREIFNSLLCK 177
Query: 119 IKC--LQRLKSIASGSETNKRCIEAAGGVEFLASIVMNSID--SAVTSPEDNGFELRTSA 174
+ LQ KS A R G EF A + S D + + +P +G
Sbjct: 178 VSSSNLQDQKSAAKELRLLTR-----KGTEFRA-LFGESPDEITRLVNPLLHGSNPDEKL 231
Query: 175 GDEALSILHHLNLSEPGLKTLLSFKNGDFIASLTRVMQKGFFESRAYAVFLLKSMSGIAD 234
++ ++ L ++++ + K L+ +N + I L +++G +R+ A + ++S + D
Sbjct: 232 QEDVVTTLLNISIHDDSNKKLVC-ENPNVIPLLIDALRRGTVATRSNAAAAIFTLSAL-D 289
Query: 235 SVQLFNLKTEFFVELVQVLRD--EISLKATKATIQTLIQVCPLGRNRVKAVDAGSVFVLT 292
S ++ K+ L+ +L + +++K A I TL C NR +AV G+V VL
Sbjct: 290 SNKVLIGKSGILKPLIDLLEEGNPLAIKDVAAAIFTL---CIAHENRSRAVRDGAVRVLG 346
Query: 293 ELLLNCKERKPCEMMLVLLDLLCQCAEGRAELLSHAAGLAVVSKKILRVSTVANDR--AV 350
+ + N + +L +L +L + E L G++ + KI R S ++ A+
Sbjct: 347 KKISNGLY---VDELLAILAMLVTHWKA-VEELGELGGVSWLL-KITRESECKRNKENAI 401
Query: 351 RILLSVCRFSAS---PSVLQEMLKLGVVAKLCLVLQVDSGSKAKEKAREILKLHGKA 404
IL ++C FS + +E G + KL + S+A+ KA IL KA
Sbjct: 402 VILHTIC-FSDRTKWKEIKEEENAHGTITKLSR----EGTSRAQRKANGILDRLRKA 453
>AT5G18320.1 | Symbols: | ARM repeat superfamily protein |
chr5:6064431-6066186 REVERSE LENGTH=458
Length = 458
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 144/294 (48%), Gaps = 26/294 (8%)
Query: 4 VDVPSYFLCPISLEIMKDPVTVTTGITYDRESIEKWLFSKNNTKTITCPVTKQPLSDCSA 63
V+VP F+C +S IM +PV + +G TY++ I +WL + TCP TKQ LS
Sbjct: 70 VEVPKEFICTLSNTIMIEPVIIASGQTYEKRYITEWLKHER-----TCPKTKQVLS---- 120
Query: 64 DLTLTPNHTLRRLIQAWCTMNASHGVERIPTPKPPVNKTQISKLLKDASRSPLM--QIKC 121
PNH + LI WC +N + + + I LL+ S S + QI+
Sbjct: 121 HRLWIPNHLISDLITQWCLVNKYDHQKPSDELVAELFTSDIEALLQRVSSSSSVADQIEA 180
Query: 122 LQRLKSIASGSETNKRCIEAAGGVEFLASIV--MNSIDSAVTSPEDNGFELRTSAGDEAL 179
+ L+ + N R AG + + ++ ++++D AV D+ EL+ + +
Sbjct: 181 AKELRH-QTKKFPNVRVFFVAGIHDSITRLLSPLSTLDEAV----DSSLELQ----ENIV 231
Query: 180 SILHHLNLSEPGLKTLLSFKNGDFIASLTRVMQKGFFESRAYAVFLLKSMSGIADSVQLF 239
+ L +L++ E KT+++ +N I LT+ +++G E+R A L S+S I DS ++
Sbjct: 232 TALFNLSILESN-KTVIA-ENCLVIPLLTKSLKQGTDETRRNAAATLSSLSAI-DSNKII 288
Query: 240 NLKTEFFVELVQVLRDEISLKATKATIQTLIQVCPLGRNRVKAVDAGSVFVLTE 293
+E L+ ++ +E L ATK T+ +C + N+ K V AG + T+
Sbjct: 289 IGNSEAVKALIDLI-EEGDLLATKEATSTVFNLCIVLENKGKVVSAGLIHAATK 341
>AT1G10560.1 | Symbols: PUB18, ATPUB18 | plant U-box 18 |
chr1:3484613-3486706 FORWARD LENGTH=697
Length = 697
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 134/304 (44%), Gaps = 48/304 (15%)
Query: 10 FLCPISLEIMKDPVTVTTGITYDRESIEKWLFSKNNTKTITCPVTKQPLSDCSADLTLTP 69
LCPISLEIM DPV + TG TYDR SI KW S N ITCP+T + L+ L
Sbjct: 292 LLCPISLEIMTDPVVIETGHTYDRSSITKWFGSGN----ITCPITGKILTSTE----LVD 343
Query: 70 NHTLRRLIQAWCTMNAS--HGVERIPTPKPPVNKTQIS-----KLLKDASRSPL------ 116
N ++R++I+ C N G+ R V ++ KL+ S L
Sbjct: 344 NVSVRQVIRKHCKTNGIVLAGISRRRKSHDDVVPESLAAKGAGKLIAKFLTSELINGGEE 403
Query: 117 MQIKCLQRLKSIASGSETNKRCIEAAGGVEFLASIVMNSIDSAVTSPEDNGFELRTSAGD 176
M + ++ ++ S N+ C+ AG V L + ++S+D ++ +A
Sbjct: 404 MIYRAVREIRVQTKTSSFNRSCLVKAGAVTPLLKL-LSSVD----------IRIQENAMA 452
Query: 177 EALSILHHLN----LSEPGLKTLLSFKNGDFIASLTRVMQKGFFESRAYAVFLLKSMSGI 232
L++ H+ ++ GLK L+ N + E+R Y+ L +S +
Sbjct: 453 GILNLSKHVTGKSKIAGEGLKILVEILN-----------EGAKTETRLYSASALFYLSSV 501
Query: 233 ADSVQLFNLKTEFFVELVQVLR-DEISLKATKATIQTLIQVCPLGRNRVKAVDAGSVFVL 291
D +L + L+ +++ D+ A ++ + ++ + N + + AG+V +L
Sbjct: 502 EDYSRLIGENPDAIPGLMNIVKGDDYGDSAKRSALLAVMGLLMQSDNHWRVLAAGAVPIL 561
Query: 292 TELL 295
+LL
Sbjct: 562 LDLL 565
>AT5G18340.1 | Symbols: | ARM repeat superfamily protein |
chr5:6070640-6072198 REVERSE LENGTH=456
Length = 456
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 99/370 (26%), Positives = 152/370 (41%), Gaps = 65/370 (17%)
Query: 4 VDVPSYFLCPISLEIMKDPVTVTTGITYDRESIEKWLFSKNNTKTITCPVTKQPLSDCSA 63
V+VP F C +S IM DPV + +G TY++ I +WL +TCP KQ L
Sbjct: 72 VEVPKEFKCTLSKTIMIDPVIIFSGQTYEKRYITEWL-----NHDLTCPTAKQVL----Y 122
Query: 64 DLTLTPNHTLRRLIQAWCTMNASHGVERIPTPKPPVNKTQISKLLKDASRSPLMQIKCLQ 123
+ LTPNH + LI WC N P PKP + +++L D S LQ
Sbjct: 123 RVCLTPNHLINELITRWCLANKYDR----PAPKPS-DIDYVTELFTDGIES------LLQ 171
Query: 124 RLKSIASGSETNKRCIEAAGGVEFLASIVMNSIDSAVTSPEDNGFELRTS---AGDEA-- 178
R I+S S + EAA + +N D + D+ L T GDE
Sbjct: 172 R---ISSPSSSVADQTEAAKELALQTEKFVNVRDFFIKELPDSITRLLTPLSVLGDEVDS 228
Query: 179 --------LSILHHLNLSEPGLKTLLSFKNGDFIASLTRVMQKGFFESRAYAVFLLKSMS 230
++ L +++ E KT+L+ +N I L + M++G +R A L S+S
Sbjct: 229 NPELQENIVTALFNMSTFEKN-KTVLA-ENHQVIPLLAKSMKQGSVVTRRNATLTLASLS 286
Query: 231 GIADSVQLFNLKTEFFVELVQVLRDEISLKATKATIQTLIQVCPLGRNRVKAVDAGSVFV 290
I DS ++ + L+ ++ + L AT + +I +C
Sbjct: 287 DI-DSNKIIIGNSVALKALIDLIGELDDLSATHDALCAVIDLC----------------- 328
Query: 291 LTELLLNCKERKPCE--MMLVLLDLLCQCAEGRAELLSHAAGLAVVSKKILRVSTVANDR 348
C ER+ + + L L + + R L A LA++S + VAN
Sbjct: 329 -------CDERENWKKAISLGLAPAAIKNIKARRNLFESLAALALISPHERVIQEVANLG 381
Query: 349 AVRILLSVCR 358
+ LLS+ R
Sbjct: 382 VIYDLLSILR 391
>AT1G27910.1 | Symbols: PUB45, ATPUB45 | plant U-box 45 |
chr1:9720962-9723975 REVERSE LENGTH=768
Length = 768
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 52/91 (57%), Gaps = 12/91 (13%)
Query: 7 PSYFLCPISLEIMKDPVTVTTGITYDRESIEKWLFSKNNTKTITCPVTKQPLSDCSADLT 66
P CPISL++M DPV + +G TY+R IEKW +N TCP T Q LS L
Sbjct: 280 PEELRCPISLQLMYDPVIIASGQTYERICIEKWFSDGHN----TCPKTHQQLS----HLC 331
Query: 67 LTPNHTLRRLIQAWCTMNASHGVERIPTPKP 97
LTPN+ ++ LI +WC N GV+ +P P
Sbjct: 332 LTPNYCVKALISSWCEQN---GVQ-VPDGPP 358
>AT1G67530.2 | Symbols: | ARM repeat superfamily protein |
chr1:25308229-25311081 FORWARD LENGTH=782
Length = 782
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 53/91 (58%), Gaps = 12/91 (13%)
Query: 7 PSYFLCPISLEIMKDPVTVTTGITYDRESIEKWLFSKNNTKTITCPVTKQPLSDCSADLT 66
P CPISL++M DPV + +G TY+R IEKW +N TCP T+Q L ++
Sbjct: 273 PEELRCPISLQLMCDPVIIASGQTYERVCIEKWFSDGHN----TCPKTQQQL----PHIS 324
Query: 67 LTPNHTLRRLIQAWCTMNASHGVERIPTPKP 97
LTPN+ ++ LI +WC N + +IP+ P
Sbjct: 325 LTPNNCVKGLIASWCEQNGT----QIPSGPP 351
>AT1G67530.1 | Symbols: | ARM repeat superfamily protein |
chr1:25308229-25311081 FORWARD LENGTH=782
Length = 782
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 53/91 (58%), Gaps = 12/91 (13%)
Query: 7 PSYFLCPISLEIMKDPVTVTTGITYDRESIEKWLFSKNNTKTITCPVTKQPLSDCSADLT 66
P CPISL++M DPV + +G TY+R IEKW +N TCP T+Q L ++
Sbjct: 273 PEELRCPISLQLMCDPVIIASGQTYERVCIEKWFSDGHN----TCPKTQQQL----PHIS 324
Query: 67 LTPNHTLRRLIQAWCTMNASHGVERIPTPKP 97
LTPN+ ++ LI +WC N + +IP+ P
Sbjct: 325 LTPNNCVKGLIASWCEQNGT----QIPSGPP 351
>AT1G24330.1 | Symbols: | ARM repeat superfamily protein |
chr1:8631779-8634835 FORWARD LENGTH=771
Length = 771
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 58/109 (53%), Gaps = 12/109 (11%)
Query: 7 PSYFLCPISLEIMKDPVTVTTGITYDRESIEKWLFSKNNTKTITCPVTKQPLSDCSADLT 66
P CPISL++M DPV + +G TY+R IEKW +N +CP T+Q L L+
Sbjct: 276 PEELRCPISLQLMYDPVIIASGQTYERVCIEKWFSDGHN----SCPKTQQQL----PHLS 327
Query: 67 LTPNHTLRRLIQAWCTMNASHGVERIPTPKPPVNKTQISKLLKDASRSP 115
LTPN+ ++ LI +WC N G+ +PT P +L S SP
Sbjct: 328 LTPNYCVKGLIASWCEQN---GI-TVPTGPPESLDLNYWRLAMSDSESP 372
>AT1G68940.2 | Symbols: | Armadillo/beta-catenin-like repeat family
protein | chr1:25921453-25925374 REVERSE LENGTH=1035
Length = 1035
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 72/144 (50%), Gaps = 20/144 (13%)
Query: 7 PSY--FLCPISLEIMKDPVTVTTGITYDRESIEKWLFSKNNTKTITCPVTKQPLSDCSAD 64
P Y F+CP++ EIM+DPVT TG+T +R+++ +W S N+ I CPVT Q L+
Sbjct: 245 PPYQAFICPLTKEIMEDPVTTETGVTCERQAVIEWFDSFGNSDEINCPVTGQKLT----- 299
Query: 65 LTLTPNHTLRRLIQAWCTMNASHGVERIPTPKPPVNKTQISKLLKDASRSPLMQIKCLQR 124
L+ N L+ +IQ W N + RI ++ ++ DA R +Q+ C
Sbjct: 300 TELSANVVLKTIIQEWKVRNEA---ARIKVAHAALSLGGSESMVIDALRD--LQMTC--- 351
Query: 125 LKSIASGSETNKRCIEAAGGVEFL 148
G E NK + AG ++ L
Sbjct: 352 -----EGKEYNKVQVREAGIIQLL 370
>AT1G68940.3 | Symbols: | Armadillo/beta-catenin-like repeat family
protein | chr1:25921453-25925374 REVERSE LENGTH=1061
Length = 1061
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 72/144 (50%), Gaps = 20/144 (13%)
Query: 7 PSY--FLCPISLEIMKDPVTVTTGITYDRESIEKWLFSKNNTKTITCPVTKQPLSDCSAD 64
P Y F+CP++ EIM+DPVT TG+T +R+++ +W S N+ I CPVT Q L+
Sbjct: 245 PPYQAFICPLTKEIMEDPVTTETGVTCERQAVIEWFDSFGNSDEINCPVTGQKLT----- 299
Query: 65 LTLTPNHTLRRLIQAWCTMNASHGVERIPTPKPPVNKTQISKLLKDASRSPLMQIKCLQR 124
L+ N L+ +IQ W N + RI ++ ++ DA R +Q+ C
Sbjct: 300 TELSANVVLKTIIQEWKVRNEA---ARIKVAHAALSLGGSESMVIDALRD--LQMTC--- 351
Query: 125 LKSIASGSETNKRCIEAAGGVEFL 148
G E NK + AG ++ L
Sbjct: 352 -----EGKEYNKVQVREAGIIQLL 370
>AT1G68940.1 | Symbols: | Armadillo/beta-catenin-like repeat family
protein | chr1:25922001-25925374 REVERSE LENGTH=1033
Length = 1033
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 71/144 (49%), Gaps = 20/144 (13%)
Query: 7 PSY--FLCPISLEIMKDPVTVTTGITYDRESIEKWLFSKNNTKTITCPVTKQPLSDCSAD 64
P Y F+CP++ EIM+DPVT TG+T +R+++ +W S N+ I CPVT Q L+
Sbjct: 245 PPYQAFICPLTKEIMEDPVTTETGVTCERQAVIEWFDSFGNSDEINCPVTGQKLT----- 299
Query: 65 LTLTPNHTLRRLIQAWCTMNASHGVERIPTPKPPVNKTQISKLLKDASRSPLMQIKCLQR 124
L+ N L+ +IQ W N + + K + L S S M I L+
Sbjct: 300 TELSANVVLKTIIQEWKVRNEAARI-----------KVAHAALSLGGSES--MVIDALRD 346
Query: 125 LKSIASGSETNKRCIEAAGGVEFL 148
L+ G E NK + AG ++ L
Sbjct: 347 LQMTCEGKEYNKVQVREAGIIQLL 370
>AT3G54790.2 | Symbols: | ARM repeat superfamily protein |
chr3:20281830-20284255 REVERSE LENGTH=724
Length = 724
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 48/81 (59%), Gaps = 8/81 (9%)
Query: 4 VDVPSYFLCPISLEIMKDPVTVTTGITYDRESIEKWLFSKNNTKTITCPVTKQPLSDCSA 63
+ +P YF CP+S E+M DPV V +G T+DR SI+KWL + CP T+Q L+
Sbjct: 200 ISIPPYFRCPLSTELMLDPVIVASGQTFDRTSIKKWL----DNGLAVCPRTRQVLTHQE- 254
Query: 64 DLTLTPNHTLRRLIQAWCTMN 84
L PN+T++ +I +W N
Sbjct: 255 ---LIPNYTVKAMIASWLEAN 272
>AT2G23140.1 | Symbols: | RING/U-box superfamily protein with ARM
repeat domain | chr2:9845696-9849105 REVERSE LENGTH=829
Length = 829
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 56/99 (56%), Gaps = 12/99 (12%)
Query: 10 FLCPISLEIMKDPVTVTTGITYDRESIEKWLFSKNNTKTITCPVTKQPLSDCSADLTLTP 69
F CP+SLE+M DPV V++G TY++ I++W+ + CP T+Q L+ TL P
Sbjct: 237 FFCPLSLEVMTDPVIVSSGQTYEKAFIKRWI----DLGLKVCPKTRQTLTHT----TLIP 288
Query: 70 NHTLRRLIQAWCTMNASHGVERIPTPKPPVNKTQISKLL 108
N+T++ LI WC N ++P P + ++S LL
Sbjct: 289 NYTVKALIANWCETNDV----KLPDPNKSTSLNELSPLL 323
>AT2G23140.2 | Symbols: | RING/U-box superfamily protein with ARM
repeat domain | chr2:9845696-9848762 REVERSE LENGTH=826
Length = 826
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 56/99 (56%), Gaps = 12/99 (12%)
Query: 10 FLCPISLEIMKDPVTVTTGITYDRESIEKWLFSKNNTKTITCPVTKQPLSDCSADLTLTP 69
F CP+SLE+M DPV V++G TY++ I++W+ + CP T+Q L+ TL P
Sbjct: 234 FFCPLSLEVMTDPVIVSSGQTYEKAFIKRWI----DLGLKVCPKTRQTLTHT----TLIP 285
Query: 70 NHTLRRLIQAWCTMNASHGVERIPTPKPPVNKTQISKLL 108
N+T++ LI WC N ++P P + ++S LL
Sbjct: 286 NYTVKALIANWCETNDV----KLPDPNKSTSLNELSPLL 320
>AT5G18330.1 | Symbols: | ARM repeat superfamily protein |
chr5:6068474-6070042 REVERSE LENGTH=445
Length = 445
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 93/367 (25%), Positives = 162/367 (44%), Gaps = 48/367 (13%)
Query: 4 VDVPSYFLCPISLEIMKDPVTVTTGITYDRESIEKWLFSKNNTKTITCPVTKQPLSDCSA 63
V+VP F+C +S +IM +P+ + +G T+++ I +WL + TCP TKQ L
Sbjct: 63 VEVPKEFICTLSNKIMIEPMLIASGQTFEKSYILEWLKHER-----TCPRTKQVL----Y 113
Query: 64 DLTLTPNHTLRRLIQAWCTMNASHGVERIPTPKPPVNKTQISKLLKDASRSPLMQIKCLQ 123
+ PNH + +I+ WC + H +R P ++ L S LQ
Sbjct: 114 HRFMIPNHLINEVIKEWCLI---HNFDR------PKTSDEVIDLFTGDLES------LLQ 158
Query: 124 RLKSIASGSETNKRCIEAAGGVEFLASI-------VMNSIDSAVTS---PEDNGFELRTS 173
R+ S +S + + E A + +S+ + +SI +T ED+ E
Sbjct: 159 RISSPSSVEDQTEAAKELALKAKRFSSVCVYFVAKIPDSITRLLTPLSISEDSNPEFL-- 216
Query: 174 AGDEALSILHHLNLSEPGLKTLLSFKNGDFIASLTRVMQKGFFESRAYAVFLLKSMSGIA 233
+ ++ LH + SE KTL++ +N + L + M++G +R ++ + S+S
Sbjct: 217 --ENIVTALHIFSTSEKN-KTLVA-ENPLVLPLLAKYMKQGTVLTRIHSAATVNSLS-YT 271
Query: 234 DSVQLFNLKTEFFVELVQVLRDEISLKATKATIQTLIQVCPLGRNRVKAVDAGSVFVLTE 293
DS ++ +E L+ V+ + SL AT L +CP+ KAV G ++
Sbjct: 272 DSNKIIIGNSEVLKALIHVIEEGDSL-ATSEAFSALSNLCPVKEISEKAVSEG---LIRA 327
Query: 294 LLLNCKERKPCEMMLVLLDLLCQCAEGRAELLSHAAGLAVVSKKILRVST--VANDRAVR 351
+ K M+L LL + E + + GL ILR S V ++ AV
Sbjct: 328 AIKKIKAGSNVSMLLSLLAFVSTQNHQTTEEMDN-LGLIYDLFSILRNSNSLVNDENAVV 386
Query: 352 ILLSVCR 358
I+ ++C+
Sbjct: 387 IVYNICK 393
>AT3G54790.1 | Symbols: | ARM repeat superfamily protein |
chr3:20281830-20284363 REVERSE LENGTH=760
Length = 760
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 48/81 (59%), Gaps = 8/81 (9%)
Query: 4 VDVPSYFLCPISLEIMKDPVTVTTGITYDRESIEKWLFSKNNTKTITCPVTKQPLSDCSA 63
+ +P YF CP+S E+M DPV V +G T+DR SI+KWL + CP T+Q L+
Sbjct: 236 ISIPPYFRCPLSTELMLDPVIVASGQTFDRTSIKKWL----DNGLAVCPRTRQVLT---- 287
Query: 64 DLTLTPNHTLRRLIQAWCTMN 84
L PN+T++ +I +W N
Sbjct: 288 HQELIPNYTVKAMIASWLEAN 308
>AT5G65500.1 | Symbols: | U-box domain-containing protein kinase
family protein | chr5:26181093-26183997 REVERSE
LENGTH=791
Length = 791
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 50/88 (56%), Gaps = 10/88 (11%)
Query: 2 DEVDVPSYFLCPISLEIMKDPVTVTTGITYDRESIEKWLFSKNNTKTITCPVTKQPLSDC 61
D D+PS F+CPI E+MK+P G +Y+ E+I++WL ++T P+++
Sbjct: 711 DPNDIPSVFMCPILQEVMKNPHVAADGFSYELEAIQEWLSMGHDT---------SPMTNL 761
Query: 62 SADLT-LTPNHTLRRLIQAWCTMNASHG 88
D LTPNHTLR LIQ W + A+
Sbjct: 762 RLDYQMLTPNHTLRSLIQDWHSKRAAQA 789
>AT1G60190.1 | Symbols: | ARM repeat superfamily protein |
chr1:22198403-22200463 FORWARD LENGTH=686
Length = 686
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 136/299 (45%), Gaps = 42/299 (14%)
Query: 12 CPISLEIMKDPVTVTTGITYDRESIEKWLFSKNNTKTITCPVTKQPLSDCSADLTLTPNH 71
CPISLEIM DPV + +G TYDR SI KW S N ITCP T + L L N
Sbjct: 284 CPISLEIMSDPVVLESGHTYDRSSITKWFASGN----ITCPKTGKTL----VSTVLVDNF 335
Query: 72 TLRRLIQAWCTMN----ASHGVERIPTPKPPVNKTQISKLLKDASRSPLMQ------IKC 121
+++++IQ++ N G +++ + + + KL + L++ +K
Sbjct: 336 SVKQVIQSYSKQNGVVMGQKGKKKVDVAE-SLAAEEAGKLTAEFLAGELIKGDEEEMVKA 394
Query: 122 LQRLKSIASGSETNKRCIEAAGGVEFLASIVMNSIDSAVTSPEDNGFELRTSAGDEALSI 181
L ++ + S + C+ AG VE L I + S D + + A++
Sbjct: 395 LVEIRILTKTSTFYRSCLVEAGVVESLMKI-LRSDDPRIQ--------------ENAMAG 439
Query: 182 LHHLNLSEPGLKTLLSFKNGDFIASLTRVMQKGF-FESRAYAVFLLKSMSGIADSVQLFN 240
+ +L+ G KT + ++G + + V+ G ESR YA L +S + D +L
Sbjct: 440 IMNLSKDIAG-KTRIVGEDGGGLRLIVEVLNDGARRESRQYAAAALFYLSSLGDYSRLIG 498
Query: 241 LKTEFFVELVQVLRD----EISLKATKATIQTLIQVCPLGRNRVKAVDAGSVFVLTELL 295
++ LV++++ + + + I++L+ P R+ A AG V VL +L+
Sbjct: 499 EISDAIPGLVRIVKSCDYGDSAKRNALIAIRSLLMNQPDNHWRILA--AGIVPVLLDLV 555
>AT5G67340.1 | Symbols: | ARM repeat superfamily protein |
chr5:26864996-26867450 FORWARD LENGTH=707
Length = 707
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 48/81 (59%), Gaps = 8/81 (9%)
Query: 4 VDVPSYFLCPISLEIMKDPVTVTTGITYDRESIEKWLFSKNNTKTITCPVTKQPLSDCSA 63
V VPS F C +SLE+M DPV V +G T++R I+KW+ + + CP T+Q LS
Sbjct: 238 VRVPSDFRCSLSLELMTDPVIVASGQTFERVFIQKWI----DMGLMVCPKTRQALSHT-- 291
Query: 64 DLTLTPNHTLRRLIQAWCTMN 84
TLTPN +R + +WC N
Sbjct: 292 --TLTPNFIVRAFLASWCETN 310
>AT1G01660.1 | Symbols: | RING/U-box superfamily protein |
chr1:240057-242608 REVERSE LENGTH=568
Length = 568
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 44/79 (55%), Gaps = 8/79 (10%)
Query: 7 PSYFLCPISLEIMKDPVTVTTGITYDRESIEKWLFSKNNTKTITCPVTKQPLSDCSADLT 66
PSYF+CPIS E+M++P G TY+ ES+ +WL + + T P+T L A
Sbjct: 498 PSYFICPISQEVMREPRVAADGFTYEAESLREWLDNGHE----TSPMTNLKL----AHNN 549
Query: 67 LTPNHTLRRLIQAWCTMNA 85
L PNH LR IQ W N+
Sbjct: 550 LVPNHALRSAIQEWLQRNS 568
>AT3G49060.1 | Symbols: | U-box domain-containing protein kinase
family protein | chr3:18187386-18191878 REVERSE
LENGTH=805
Length = 805
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 44/74 (59%), Gaps = 8/74 (10%)
Query: 7 PSYFLCPISLEIMKDPVTVTTGITYDRESIEKWLFSKNNTKTITCPVTKQPLSDCSADLT 66
PS++LCPI E+MKDP+ G TY+ E+I +WL + ++ T P+T + DC+
Sbjct: 736 PSHYLCPIFQEVMKDPLIAADGFTYEAEAIREWLANGHD----TSPMTNLKMEDCN---- 787
Query: 67 LTPNHTLRRLIQAW 80
L PNH L IQ W
Sbjct: 788 LIPNHALHLAIQDW 801
>AT3G49060.2 | Symbols: | U-box domain-containing protein kinase
family protein | chr3:18187054-18191878 REVERSE
LENGTH=795
Length = 795
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 44/74 (59%), Gaps = 8/74 (10%)
Query: 7 PSYFLCPISLEIMKDPVTVTTGITYDRESIEKWLFSKNNTKTITCPVTKQPLSDCSADLT 66
PS++LCPI E+MKDP+ G TY+ E+I +WL + ++ T P+T + DC+
Sbjct: 726 PSHYLCPIFQEVMKDPLIAADGFTYEAEAIREWLANGHD----TSPMTNLKMEDCN---- 777
Query: 67 LTPNHTLRRLIQAW 80
L PNH L IQ W
Sbjct: 778 LIPNHALHLAIQDW 791
>AT1G01680.1 | Symbols: ATPUB54, PUB54 | plant U-box 54 |
chr1:246411-248329 REVERSE LENGTH=308
Length = 308
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 43/78 (55%), Gaps = 8/78 (10%)
Query: 10 FLCPISLEIMKDPVTVTTGITYDRESIEKWLFSKNNTKTITCPVTKQPLSDCSADLTLTP 69
F CPIS+EIM+DP G TY+ E KWL S T P T +PL + + L P
Sbjct: 237 FKCPISMEIMRDPHVAADGFTYEAEEFRKWLRSGGR----TSPKTNKPLENHN----LVP 288
Query: 70 NHTLRRLIQAWCTMNASH 87
NHTLR +I+ W N ++
Sbjct: 289 NHTLRIIIKDWLEKNPNY 306
>AT2G45920.1 | Symbols: | U-box domain-containing protein |
chr2:18899363-18901097 FORWARD LENGTH=400
Length = 400
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 42/82 (51%), Gaps = 8/82 (9%)
Query: 5 DVPSYFLCPISLEIMKDPVTVTTGITYDRESIEKWLFSKNNTKTITCPVTKQPLSDCSAD 64
+ P YF+CPISLE+MKDP G TY+ E+I WL + T P+T L
Sbjct: 324 EAPQYFICPISLEVMKDPQLAADGFTYEAEAISTWLQGGHE----TSPMTNTKLHHTK-- 377
Query: 65 LTLTPNHTLRRLIQAWCTMNAS 86
L PN LR IQ W ++S
Sbjct: 378 --LVPNLALRSAIQEWLHASSS 397
>AT5G51270.1 | Symbols: | U-box domain-containing protein kinase
family protein | chr5:20835137-20838262 REVERSE
LENGTH=819
Length = 819
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 42/78 (53%), Gaps = 9/78 (11%)
Query: 7 PSYFLCPISLEIMKDPVTVTTGITYDRESIEKWLFSKNNTKTITCPVTKQPLSDCSADLT 66
PS+F CP+ ++MK+P G TYDR +IE+W+ + T PVT PL ++
Sbjct: 750 PSHFFCPLLKDVMKEPCIAADGYTYDRRAIEEWMENHR-----TSPVTNSPLQ----NVN 800
Query: 67 LTPNHTLRRLIQAWCTMN 84
L PNHTL I W N
Sbjct: 801 LLPNHTLYAAIVEWRNRN 818
>AT2G45910.1 | Symbols: | U-box domain-containing protein kinase
family protein | chr2:18894520-18898212 FORWARD
LENGTH=834
Length = 834
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 41/75 (54%), Gaps = 8/75 (10%)
Query: 6 VPSYFLCPISLEIMKDPVTVTTGITYDRESIEKWLFSKNNTKTITCPVTKQPLSDCSADL 65
P YF+CPI E+M+DP G TY+ E+I WL S+++ T P+T LS S
Sbjct: 763 APPYFICPIFQEVMQDPHVAADGFTYEAEAIRAWLDSEHD----TSPMTNVKLSHTS--- 815
Query: 66 TLTPNHTLRRLIQAW 80
L NH LR IQ W
Sbjct: 816 -LIANHALRSAIQEW 829
>AT5G57035.1 | Symbols: | U-box domain-containing protein kinase
family protein | chr5:23080743-23083819 FORWARD
LENGTH=789
Length = 789
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 42/74 (56%), Gaps = 8/74 (10%)
Query: 7 PSYFLCPISLEIMKDPVTVTTGITYDRESIEKWLFSKNNTKTITCPVTKQPLSDCSADLT 66
P+++ CPI EIM+DP G TY+R++I++W+ + PVTK L
Sbjct: 709 PTHYYCPILKEIMEDPQIAADGFTYERKAIKEWIQKHQD----VSPVTKHRLKHSD---- 760
Query: 67 LTPNHTLRRLIQAW 80
LTPNHTLR I+ W
Sbjct: 761 LTPNHTLRSAIREW 774
>AT2G19410.1 | Symbols: | U-box domain-containing protein kinase
family protein | chr2:8404901-8409012 REVERSE LENGTH=801
Length = 801
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 41/74 (55%), Gaps = 9/74 (12%)
Query: 7 PSYFLCPISLEIMKDPVTVTTGITYDRESIEKWLFSKNNTKTITCPVTKQPLSDCSADLT 66
PS++ CPI EIM++P G TY+R++I WL N PVT+Q L
Sbjct: 726 PSHYFCPILREIMEEPEIAADGFTYERKAILAWLEKHN-----ISPVTRQKLD----HFK 776
Query: 67 LTPNHTLRRLIQAW 80
LTPNHTLR I+ W
Sbjct: 777 LTPNHTLRSAIRDW 790
>AT4G36550.1 | Symbols: | ARM repeat superfamily protein |
chr4:17245400-17247926 REVERSE LENGTH=718
Length = 718
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 44/80 (55%), Gaps = 8/80 (10%)
Query: 6 VPSYFLCPISLEIMKDPVTVTTGITYDRESIEKWLFSKNNTKTITCPVTKQPLSDCSADL 65
+P F C +S +M DPV +++G T++R I+KW N+ +CP++K+ L D
Sbjct: 219 LPEKFKCTLSRTVMYDPVIISSGNTFERMQIQKWFDEGND----SCPISKRKLD----DF 270
Query: 66 TLTPNHTLRRLIQAWCTMNA 85
TL PN L+ I WC N
Sbjct: 271 TLKPNVELKSQISEWCAKNG 290
>AT1G76390.2 | Symbols: | ARM repeat superfamily protein |
chr1:28655914-28658531 FORWARD LENGTH=811
Length = 811
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 49/81 (60%), Gaps = 5/81 (6%)
Query: 5 DVPSYFLCPISLEIMKDPVTVTTGITYDRESIEKWLFS-KNNTKTITCPVTKQPLSDCSA 63
++ F+CP++ ++M +PVT+ G T++RE+IEKW + N + ++CP+T + LS
Sbjct: 24 NIYEAFICPLTKQVMHNPVTLENGQTFEREAIEKWFQECRENGQPLSCPITSKELSITD- 82
Query: 64 DLTLTPNHTLRRLIQAWCTMN 84
L+P+ LR I+ W N
Sbjct: 83 ---LSPSIALRNTIEEWRARN 100
>AT1G76390.1 | Symbols: | ARM repeat superfamily protein |
chr1:28655914-28658531 FORWARD LENGTH=811
Length = 811
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 49/81 (60%), Gaps = 5/81 (6%)
Query: 5 DVPSYFLCPISLEIMKDPVTVTTGITYDRESIEKWLFS-KNNTKTITCPVTKQPLSDCSA 63
++ F+CP++ ++M +PVT+ G T++RE+IEKW + N + ++CP+T + LS
Sbjct: 24 NIYEAFICPLTKQVMHNPVTLENGQTFEREAIEKWFQECRENGQPLSCPITSKELSITD- 82
Query: 64 DLTLTPNHTLRRLIQAWCTMN 84
L+P+ LR I+ W N
Sbjct: 83 ---LSPSIALRNTIEEWRARN 100
>AT1G56040.1 | Symbols: | HEAT/U-box domain-containing protein |
chr1:20960356-20962334 REVERSE LENGTH=485
Length = 485
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 43/78 (55%), Gaps = 8/78 (10%)
Query: 1 MDEVDVPSYFLCPISLEIMKDPVTVTTGITYDRESIEKWLFSKNNTKTITCPVTKQPLSD 60
M++ PS F CPI+ E+MKDP G TY+ ESI KWL +T T P+T LS
Sbjct: 413 MEKRQPPSSFFCPITQEVMKDPHFAADGFTYEAESIRKWL----STGHQTSPMTNLRLS- 467
Query: 61 CSADLTLTPNHTLRRLIQ 78
LTL PN LR I+
Sbjct: 468 ---HLTLVPNRALRSAIE 482
>AT1G20780.1 | Symbols: PUB44, ATPUB44, SAUL1 |
senescence-associated E3 ubiquitin ligase 1 |
chr1:7217812-7220609 FORWARD LENGTH=801
Length = 801
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 48/78 (61%), Gaps = 9/78 (11%)
Query: 10 FLCPISLEIMKDPVTVTTGITYDRESIEKWLFS-KNNTKTITCPVTKQPL--SDCSADLT 66
F+CP++ E+M DPVT+ G T++RE+IEKW +++ + +CP+T Q L +D SA +
Sbjct: 27 FICPLTKEVMHDPVTLENGRTFEREAIEKWFKECRDSGRPPSCPLTSQELTSTDVSASI- 85
Query: 67 LTPNHTLRRLIQAWCTMN 84
LR I+ W + N
Sbjct: 86 -----ALRNTIEEWRSRN 98
>AT4G25160.1 | Symbols: | U-box domain-containing protein kinase
family protein | chr4:12903360-12906669 REVERSE
LENGTH=835
Length = 835
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 40/74 (54%), Gaps = 9/74 (12%)
Query: 7 PSYFLCPISLEIMKDPVTVTTGITYDRESIEKWLFSKNNTKTITCPVTKQPLSDCSADLT 66
P++F+CP+ ++M +P G TYDR +IE+WL N T P+T PL +
Sbjct: 767 PTHFICPLLKDVMNEPCVAADGYTYDRHAIEEWLKEHN-----TSPMTDSPLHSKN---- 817
Query: 67 LTPNHTLRRLIQAW 80
L PN+TL I W
Sbjct: 818 LLPNYTLYTAIMEW 831
>AT5G61550.1 | Symbols: | U-box domain-containing protein kinase
family protein | chr5:24748325-24751558 FORWARD
LENGTH=845
Length = 845
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 41/74 (55%), Gaps = 9/74 (12%)
Query: 7 PSYFLCPISLEIMKDPVTVTTGITYDRESIEKWLFSKNNTKTITCPVTKQPLSDCSADLT 66
PS+F+CP+ +M +P G TYDRE+IE+WL K+ T PVT PL + +
Sbjct: 776 PSHFICPLLKGVMNEPCVAADGYTYDREAIEEWLRQKD-----TSPVTNLPLPNKN---- 826
Query: 67 LTPNHTLRRLIQAW 80
L N+TL I W
Sbjct: 827 LIANYTLYSAIMEW 840
>AT5G61550.2 | Symbols: | U-box domain-containing protein kinase
family protein | chr5:24748325-24751805 FORWARD
LENGTH=860
Length = 860
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 41/74 (55%), Gaps = 9/74 (12%)
Query: 7 PSYFLCPISLEIMKDPVTVTTGITYDRESIEKWLFSKNNTKTITCPVTKQPLSDCSADLT 66
PS+F+CP+ +M +P G TYDRE+IE+WL K+ T PVT PL + +
Sbjct: 776 PSHFICPLLKGVMNEPCVAADGYTYDREAIEEWLRQKD-----TSPVTNLPLPNKN---- 826
Query: 67 LTPNHTLRRLIQAW 80
L N+TL I W
Sbjct: 827 LIANYTLYSAIMEW 840
>AT3G61390.2 | Symbols: | RING/U-box superfamily protein |
chr3:22716418-22718270 FORWARD LENGTH=435
Length = 435
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 40/74 (54%), Gaps = 8/74 (10%)
Query: 7 PSYFLCPISLEIMKDPVTVTTGITYDRESIEKWLFSKNNTKTITCPVTKQPLSDCSADLT 66
P YF+CPI+ +IM+DP G TY+ E+I +W F + + T P+ + L S
Sbjct: 354 PQYFICPITHDIMEDPHVAADGFTYEGEAISRW-FERGHE---TSPMINKRLPHTS---- 405
Query: 67 LTPNHTLRRLIQAW 80
L PN LR IQ W
Sbjct: 406 LVPNLALRSAIQEW 419
>AT5G61560.2 | Symbols: | U-box domain-containing protein kinase
family protein | chr5:24753476-24756506 FORWARD
LENGTH=794
Length = 794
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 9/76 (11%)
Query: 5 DVPSYFLCPISLEIMKDPVTVTTGITYDRESIEKWLFSKNNTKTITCPVTKQPLSDCSAD 64
+ P++F CPI+ ++M++P + G TY++ +I++WL K P+T P S
Sbjct: 722 NAPTHFYCPITKDVMENPCVASDGYTYEKRAIKEWL-----QKNHKSPMTDLPFPSDS-- 774
Query: 65 LTLTPNHTLRRLIQAW 80
L PNH+L I+ W
Sbjct: 775 --LLPNHSLLSAIKEW 788
>AT5G61560.1 | Symbols: | U-box domain-containing protein kinase
family protein | chr5:24753476-24756506 FORWARD
LENGTH=796
Length = 796
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 9/76 (11%)
Query: 5 DVPSYFLCPISLEIMKDPVTVTTGITYDRESIEKWLFSKNNTKTITCPVTKQPLSDCSAD 64
+ P++F CPI+ ++M++P + G TY++ +I++WL K P+T P S
Sbjct: 724 NAPTHFYCPITKDVMENPCVASDGYTYEKRAIKEWL-----QKNHKSPMTDLPFPSDS-- 776
Query: 65 LTLTPNHTLRRLIQAW 80
L PNH+L I+ W
Sbjct: 777 --LLPNHSLLSAIKEW 790
>AT5G40140.1 | Symbols: | RING/U-box superfamily protein with ARM
repeat domain | chr5:16057347-16058999 FORWARD
LENGTH=550
Length = 550
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 50/109 (45%), Gaps = 25/109 (22%)
Query: 3 EVDVPSYFLCPISLEIMKDPVTVTTGITYDRESIEKWLFSKNNTKTITCPV---TKQPLS 59
+ ++P+ FLCPIS +M DP+ V++G +Y+R + I C T P
Sbjct: 55 KTEIPAEFLCPISGSLMADPIIVSSGHSYERACV------------IACKTLGFTPTPPP 102
Query: 60 DCSADLTLTPNHTLRRLIQAWCTMNASHGVERIPTPKPPVNKTQISKLL 108
D S T+ PN L+ I +WC P PK P+N KL+
Sbjct: 103 DFS---TVIPNLALKSAIHSWCERRC------FPPPK-PLNSAAAEKLI 141
>AT5G65200.1 | Symbols: PUB38, ATPUB38 | plant U-box 38 |
chr5:26048173-26049843 REVERSE LENGTH=556
Length = 556
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 82/182 (45%), Gaps = 40/182 (21%)
Query: 7 PSYFLCPISLEIMKDPVTVTTGITYDRESIE-----KWLFSKNNTKTITCPVTKQPLSDC 61
P FLCPIS +M DPV V++G T++R ++ ++ N+ ++ L D
Sbjct: 34 PVEFLCPISKSVMSDPVVVSSGQTFERVCVQVCRDLNFIPKLND--------DEESLPDF 85
Query: 62 SADLTLTPNHTLRRLIQAWCTMNASHGVERIPTPKPPVNKTQISKLLKDASRSPLMQIKC 121
S + PN ++ I WC + GV R P+PP + + + ++L+ P ++I+
Sbjct: 86 S---NIIPNLNMKSTIDTWCD---TVGVSR---PQPP-DYSTVERILRQQMPPPDVEIRV 135
Query: 122 LQRLKSIASGSETNKRCIEAAGGVEFLASIVMNSIDSAVTSPEDNGFELRTSAGDEALSI 181
++ E V A ++++ DS + D F T++ DE++ +
Sbjct: 136 SEQ---------------ELLRAVAHRAPMIIHHADSELMGRRD--FNNSTTSSDESVIV 178
Query: 182 LH 183
H
Sbjct: 179 AH 180