Miyakogusa Predicted Gene
- Lj1g3v4752500.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v4752500.1 Non Chatacterized Hit- tr|K4ASD3|K4ASD3_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,37.84,8e-17,seg,NULL; FAMILY NOT NAMED,NULL,CUFF.33068.1
(302 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G05675.1 | Symbols: | BTB/POZ domain-containing protein | ch... 321 4e-88
AT3G05675.2 | Symbols: | BTB/POZ domain-containing protein | ch... 321 4e-88
AT4G10800.1 | Symbols: | BEST Arabidopsis thaliana protein matc... 69 3e-12
AT3G50780.1 | Symbols: | BEST Arabidopsis thaliana protein matc... 50 2e-06
AT1G63850.1 | Symbols: | BTB/POZ domain-containing protein | ch... 49 3e-06
>AT3G05675.1 | Symbols: | BTB/POZ domain-containing protein |
chr3:1658425-1659859 REVERSE LENGTH=441
Length = 441
Score = 321 bits (822), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 160/287 (55%), Positives = 216/287 (75%), Gaps = 7/287 (2%)
Query: 17 GDRSTSDVVVRLRTKEGRDDWLYCHSEILVKNSKFFAERLSESWPTLAIIDSRNCVDVYC 76
GDRS+SD+VVRLR +EGRDDW+YCHS+IL + S++FA+RLS+ WPT I+DSR CV+V C
Sbjct: 15 GDRSSSDIVVRLRNEEGRDDWIYCHSKILSEKSQYFADRLSDKWPTCKILDSRYCVEVIC 74
Query: 77 QESNFDHHVNLVRLLYVVIDG-SVDDLWHGVRNALGIIQVAVELGCQQIVTACVSYLXXX 135
QES++DHH+NL+RLLYVV D D+L H V++ALGI+ VA EL C QIVTACV+YL
Sbjct: 75 QESDYDHHINLLRLLYVVSDDVHEDNLCHNVKSALGILSVAKELSCPQIVTACVNYLEAV 134
Query: 136 XXXXXXXXXILKIVPQMGLQAEPILARLQPVKHSALVNVFLSAVRFATSSPPPSMNDLKS 195
IL+IVP++G +AEPILARLQPV SA++ +F+SA RFATSSPP + D+KS
Sbjct: 135 PWEEGEEEEILRIVPRIGSEAEPILARLQPVDQSAVLEIFVSAFRFATSSPPLLLGDIKS 194
Query: 196 SVQEQLEYMLTEDDDDSPLVTADDSIKIEVKECVNKLISRFNSSL--IALFCGSTESLSE 253
S QEQ+EYM+TE DDD+PL+ AD+ +K+EVK+CV L RF L I L +E +++
Sbjct: 195 SAQEQIEYMITE-DDDAPLLIADEEVKLEVKQCVKSLFVRFFQCLEEITLKPVESEVINK 253
Query: 254 AGNTQLFQSYLTDLLWACQILSKLEIMREFVEYWFDASEKIIRVLEQ 300
G+ F+ L+D+ W QIL+K+E++R+FV W D SEK+++V+EQ
Sbjct: 254 KGS---FRMVLSDMCWVFQILTKMEVVRDFVITWADISEKLVKVVEQ 297
>AT3G05675.2 | Symbols: | BTB/POZ domain-containing protein |
chr3:1658425-1659859 REVERSE LENGTH=441
Length = 441
Score = 321 bits (822), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 160/287 (55%), Positives = 216/287 (75%), Gaps = 7/287 (2%)
Query: 17 GDRSTSDVVVRLRTKEGRDDWLYCHSEILVKNSKFFAERLSESWPTLAIIDSRNCVDVYC 76
GDRS+SD+VVRLR +EGRDDW+YCHS+IL + S++FA+RLS+ WPT I+DSR CV+V C
Sbjct: 15 GDRSSSDIVVRLRNEEGRDDWIYCHSKILSEKSQYFADRLSDKWPTCKILDSRYCVEVIC 74
Query: 77 QESNFDHHVNLVRLLYVVIDG-SVDDLWHGVRNALGIIQVAVELGCQQIVTACVSYLXXX 135
QES++DHH+NL+RLLYVV D D+L H V++ALGI+ VA EL C QIVTACV+YL
Sbjct: 75 QESDYDHHINLLRLLYVVSDDVHEDNLCHNVKSALGILSVAKELSCPQIVTACVNYLEAV 134
Query: 136 XXXXXXXXXILKIVPQMGLQAEPILARLQPVKHSALVNVFLSAVRFATSSPPPSMNDLKS 195
IL+IVP++G +AEPILARLQPV SA++ +F+SA RFATSSPP + D+KS
Sbjct: 135 PWEEGEEEEILRIVPRIGSEAEPILARLQPVDQSAVLEIFVSAFRFATSSPPLLLGDIKS 194
Query: 196 SVQEQLEYMLTEDDDDSPLVTADDSIKIEVKECVNKLISRFNSSL--IALFCGSTESLSE 253
S QEQ+EYM+TE DDD+PL+ AD+ +K+EVK+CV L RF L I L +E +++
Sbjct: 195 SAQEQIEYMITE-DDDAPLLIADEEVKLEVKQCVKSLFVRFFQCLEEITLKPVESEVINK 253
Query: 254 AGNTQLFQSYLTDLLWACQILSKLEIMREFVEYWFDASEKIIRVLEQ 300
G+ F+ L+D+ W QIL+K+E++R+FV W D SEK+++V+EQ
Sbjct: 254 KGS---FRMVLSDMCWVFQILTKMEVVRDFVITWADISEKLVKVVEQ 297
>AT4G10800.1 | Symbols: | BEST Arabidopsis thaliana protein match
is: BTB/POZ domain-containing protein
(TAIR:AT3G05675.1); Has 1807 Blast hits to 1807 proteins
in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736;
Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes
- 339 (source: NCBI BLink). | chr4:6643678-6644529
FORWARD LENGTH=283
Length = 283
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 81/136 (59%), Gaps = 17/136 (12%)
Query: 173 NVFLSAVRFATS-----SPPPSMNDLKSSVQEQLEYMLTEDDDDSPLVTADDS---IKIE 224
NVFLSA+ FA S + P +++LK+S QEQ+E+ML+ED++ L++ ++ +++
Sbjct: 14 NVFLSALHFAMSIDTLKNSPELVDELKTSAQEQVEFMLSEDEEVRLLISEEEVKSVVRLG 73
Query: 225 VKECVNKLISRFNSSLIALFCGSTESLSEAGNTQLFQSYLTDLLWACQILSKLEIMREFV 284
+ ++ L+ R +S L+ L E + ++ L D+ W C++L ++E+M++ V
Sbjct: 74 ISNVISMLLDRLSSLLVIL--------PECTEFSVLKT-LYDIEWLCKVLPRMELMKDLV 124
Query: 285 EYWFDASEKIIRVLEQ 300
W DAS +I+ + ++
Sbjct: 125 VKWTDASSEILVIAQK 140
>AT3G50780.1 | Symbols: | BEST Arabidopsis thaliana protein match
is: BTB/POZ domain-containing protein
(TAIR:AT1G63850.1); Has 298 Blast hits to 298 proteins
in 22 species: Archae - 0; Bacteria - 0; Metazoa - 10;
Fungi - 0; Plants - 287; Viruses - 0; Other Eukaryotes -
1 (source: NCBI BLink). | chr3:18875662-18877341 REVERSE
LENGTH=520
Length = 520
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 124/292 (42%), Gaps = 35/292 (11%)
Query: 11 KIACVIGDRSTSDVVVRLRTKEGRDDWLYCHSEILVKNSKFFAERLSESWPTLAIIDSRN 70
K+A G+ +SD V L K+G L H ++LV +S FFA++L+E A ++ +
Sbjct: 114 KVAIEFGEPGSSDAKVILVGKQGFCVKLSVHKKVLVDHSCFFAKKLAEKDSVFACLEIES 173
Query: 71 CVDVYCQESNFDHHVNLVRLLYVVIDGSVDDLWHGVRNALGIIQVAVELGCQQIVTACVS 130
C D + +V + L+Y D + V L +++VA LG + +C+
Sbjct: 174 CEDA-------ELYVETIGLMYCK-DMKQRLMKQNVSRVLRVLKVAELLGFSSCIQSCLD 225
Query: 131 YLXX-----XXXXXXXXXXILKIVPQMGLQAEPILAR-----LQPVKHSALVNVFLSAVR 180
YL IL++ + G+ P+L R + P K + L + +R
Sbjct: 226 YLEAVPWVGEEEEEKVISSILRLKTE-GVGVTPVLKRVASNAVDPPKET-LSRIIELVLR 283
Query: 181 FATSSPPPSMNDLKSSVQEQLEYMLTEDDDDSPLVTADDSIKIEVKECVNKLISRFNSSL 240
S S ++KS V + +L E + + +D+I + C++ S+
Sbjct: 284 ---SKEEKSRREMKSIVLK----LLREQNGANVADNFNDTIYSSCQTCLD--------SV 328
Query: 241 IALFCGSTESLSEAGNTQLFQSYLTDLLWACQILSKLEIMREFVEYWFDASE 292
++LF ++E +T+ +L W +L++ + EF W + E
Sbjct: 329 LSLFKQASEGEKPETDTKQIAVEADNLTWLLDVLAERQAAEEFSVTWANQKE 380
>AT1G63850.1 | Symbols: | BTB/POZ domain-containing protein |
chr1:23696962-23698708 FORWARD LENGTH=548
Length = 548
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 64/125 (51%), Gaps = 16/125 (12%)
Query: 16 IGDRSTSDVVVRLRTKEGRDDWLYCHSEILVKNSKFFAERLSESW------PTLA--IID 67
D ++SDV + L +K+G + H +ILV +S+FFA +LS+ W P+ + I++
Sbjct: 135 FNDPNSSDVKLTLSSKDGISITMCVHRQILVAHSRFFAMKLSDRWSKQQLPPSSSPYIVE 194
Query: 68 SRNCVDVYCQESNFDHHVNLVRLLYVVIDGSVDDLWHGVRNALGIIQVAVELGCQQIVTA 127
+C DV ++ + L+Y D + H V LGI++V+ +G V +
Sbjct: 195 ISDCDDVEV-------YIETLMLMYCR-DLRKKMMRHDVSRVLGILKVSAAIGFDAGVLS 246
Query: 128 CVSYL 132
C+ YL
Sbjct: 247 CLEYL 251