Miyakogusa Predicted Gene
- Lj1g3v4727880.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v4727880.2 Non Chatacterized Hit- tr|I1NAS0|I1NAS0_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.7035
PE=,85.99,0,TLD,TLDc; SUBFAMILY NOT NAMED,NULL; NUCLEOLAR PROTEIN
7/ESTROGEN RECEPTOR COACTIVATOR-RELATED,NULL; ,CUFF.33046.2
(223 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G06260.1 | Symbols: | TLD-domain containing nucleolar protei... 310 6e-85
AT4G34070.1 | Symbols: | Calcium-binding EF-hand family protein... 85 3e-17
AT2G05590.2 | Symbols: | TLD-domain containing nucleolar protei... 64 6e-11
AT4G39870.2 | Symbols: | TLD-domain containing nucleolar protei... 59 2e-09
AT4G39870.1 | Symbols: | TLD-domain containing nucleolar protei... 59 2e-09
AT2G05590.1 | Symbols: | TLD-domain containing nucleolar protei... 53 2e-07
>AT5G06260.1 | Symbols: | TLD-domain containing nucleolar protein |
chr5:1902755-1904835 REVERSE LENGTH=424
Length = 424
Score = 310 bits (793), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 141/209 (67%), Positives = 176/209 (84%), Gaps = 3/209 (1%)
Query: 18 RPGSQIPKLLTSKGVDSNITLLREEYAWHIGGALSQQELEDWKILYHSAVNGLSFNTFLG 77
RPG Q+P LL V S+ LL++EYAWHIGGAL EL +WK+LYHS+V+G SFNTFLG
Sbjct: 197 RPGYQVPHLLYEDSVSSDRLLLKKEYAWHIGGALPHHELVEWKLLYHSSVHGQSFNTFLG 256
Query: 78 NISSH-EGPTVLIIKDTEGYIYGGYASQPWERHAEFYGDMKSYLFQLYPKASIFRPTGAN 136
+ S+ +VLIIKDTEGY+YGGYASQPWER+++FYGDMKS+LFQL PKA+I+RPTGAN
Sbjct: 257 HTSNTGMSASVLIIKDTEGYVYGGYASQPWERYSDFYGDMKSFLFQLNPKAAIYRPTGAN 316
Query: 137 NNLQWCAANFSSEDIPNGIGFGGRVHHFGLFISANFDQGHTFSCSTFGSPCLTKTNRILP 196
N+QWCA NF+SE+IPNGIGFGG+++HFGLFISA+FDQG TF C+TFGSP L+KT+RI P
Sbjct: 317 TNIQWCATNFTSENIPNGIGFGGKINHFGLFISASFDQGQTFECTTFGSPSLSKTSRIQP 376
Query: 197 EVIECWGVTQGAVQ--GKNDAVKGTILER 223
EVIECWG+ Q + + K++A+KGT+LER
Sbjct: 377 EVIECWGIVQASNEQDTKHNAMKGTVLER 405
>AT4G34070.1 | Symbols: | Calcium-binding EF-hand family protein |
chr4:16323341-16325253 REVERSE LENGTH=313
Length = 313
Score = 85.1 bits (209), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 49/67 (73%)
Query: 18 RPGSQIPKLLTSKGVDSNITLLREEYAWHIGGALSQQELEDWKILYHSAVNGLSFNTFLG 77
RPG Q+P LL V S+ LL++EYAWHIGGAL EL +WK+LY S+++G SFNTFLG
Sbjct: 243 RPGYQVPDLLYEDSVSSDRLLLKKEYAWHIGGALPHHELVEWKLLYRSSLHGQSFNTFLG 302
Query: 78 NISSHEG 84
+ S EG
Sbjct: 303 HTSGMEG 309
>AT2G05590.2 | Symbols: | TLD-domain containing nucleolar protein |
chr2:2067196-2068951 FORWARD LENGTH=303
Length = 303
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 69/153 (45%), Gaps = 12/153 (7%)
Query: 59 WKILYHSAVNGLSFNTFLGNISSHEGPTVLIIKDTEGYIYGGYASQPWE--RHAEFYGDM 116
W +LY + +G+S T L GP +L+ D +G ++G P + ++ G
Sbjct: 156 WILLYSTLKHGISLRTLLRRSGELPGPCLLVAGDKQGAVFGALLECPLQPTPKRKYQGTS 215
Query: 117 KSYLF-QLYPKASIFRPTGANNNLQWCAANFSSEDIPNGIGFGGRVHHFGLFISANFDQG 175
+++LF +Y + IFRPTGAN C F + FGG +F L + + +
Sbjct: 216 QTFLFTTIYGEPRIFRPTGANRYYLMCMNEF--------LAFGGG-GNFALCLDEDLLKA 266
Query: 176 HTFSCSTFGSPCLTKTNRILPEVIECWGVTQGA 208
+ TFG+ CL + + +E WG +
Sbjct: 267 TSGPSETFGNECLASSTEFELKNVELWGFAHAS 299
>AT4G39870.2 | Symbols: | TLD-domain containing nucleolar protein |
chr4:18502234-18504275 FORWARD LENGTH=394
Length = 394
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 72/152 (47%), Gaps = 11/152 (7%)
Query: 59 WKILYHSAVNGLSFNTFLGNISSHEGPTVLIIKDTEGYIYGGYASQPW-ERHAEFYGDMK 117
W +LY + +G+S +T G ++L++ D +G ++GG P ++ G
Sbjct: 232 WILLYSTWRHGISLSTLYRKSLLWPGLSLLVVGDRKGSVFGGLVEAPLIPTDKKYQGTNS 291
Query: 118 SYLFQLYP-KASIFRPTGANNNLQWCAANFSSEDIPNGIGFGGRVHHFGLFISANFDQGH 176
+++F + +I+RPTGAN C+ F + +G GGR F L++ + G
Sbjct: 292 TFVFTNKSGQPTIYRPTGANRFYTLCSKEFLA------LGGGGR---FALYLDSELLSGS 342
Query: 177 TFSCSTFGSPCLTKTNRILPEVIECWGVTQGA 208
+ T+G+ CL + + +E WG G+
Sbjct: 343 SAYSETYGNSCLADSQDFDVKEVELWGFVYGS 374
>AT4G39870.1 | Symbols: | TLD-domain containing nucleolar protein |
chr4:18502234-18504275 FORWARD LENGTH=394
Length = 394
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 72/152 (47%), Gaps = 11/152 (7%)
Query: 59 WKILYHSAVNGLSFNTFLGNISSHEGPTVLIIKDTEGYIYGGYASQPW-ERHAEFYGDMK 117
W +LY + +G+S +T G ++L++ D +G ++GG P ++ G
Sbjct: 232 WILLYSTWRHGISLSTLYRKSLLWPGLSLLVVGDRKGSVFGGLVEAPLIPTDKKYQGTNS 291
Query: 118 SYLFQLYP-KASIFRPTGANNNLQWCAANFSSEDIPNGIGFGGRVHHFGLFISANFDQGH 176
+++F + +I+RPTGAN C+ F + +G GGR F L++ + G
Sbjct: 292 TFVFTNKSGQPTIYRPTGANRFYTLCSKEFLA------LGGGGR---FALYLDSELLSGS 342
Query: 177 TFSCSTFGSPCLTKTNRILPEVIECWGVTQGA 208
+ T+G+ CL + + +E WG G+
Sbjct: 343 SAYSETYGNSCLADSQDFDVKEVELWGFVYGS 374
>AT2G05590.1 | Symbols: | TLD-domain containing nucleolar protein |
chr2:2067196-2068650 FORWARD LENGTH=263
Length = 263
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 49/104 (47%), Gaps = 11/104 (10%)
Query: 59 WKILYHSAVNGLSFNTFLGNISSHEGPTVLIIKDTEGYIYGGYASQPWE--RHAEFYGDM 116
W +LY + +G+S T L GP +L+ D +G ++G P + ++ G
Sbjct: 156 WILLYSTLKHGISLRTLLRRSGELPGPCLLVAGDKQGAVFGALLECPLQPTPKRKYQGTS 215
Query: 117 KSYLF-QLYPKASIFRPTGANNNLQWCAANFSSEDIPNGIGFGG 159
+++LF +Y + IFRPTGAN C F + FGG
Sbjct: 216 QTFLFTTIYGEPRIFRPTGANRYYLMCMNEF--------LAFGG 251