Miyakogusa Predicted Gene
- Lj1g3v4725830.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v4725830.1 Non Chatacterized Hit- tr|K3Y5Z6|K3Y5Z6_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si009635,26.71,1e-18,PPR: pentatricopeptide repeat
domain,Pentatricopeptide repeat; no
description,Tetratricopeptide-like,CUFF.33039.1
(346 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 452 e-127
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 319 2e-87
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 317 5e-87
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 306 1e-83
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 305 4e-83
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 297 8e-81
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 293 9e-80
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 292 2e-79
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 288 5e-78
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 286 2e-77
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 285 4e-77
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 282 3e-76
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 281 5e-76
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 279 2e-75
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 277 8e-75
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 276 2e-74
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 275 3e-74
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 275 3e-74
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 275 4e-74
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 273 1e-73
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 272 2e-73
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 272 2e-73
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 272 3e-73
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 271 4e-73
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 269 2e-72
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 268 3e-72
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 267 9e-72
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 266 2e-71
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 265 5e-71
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 263 1e-70
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 262 3e-70
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 262 3e-70
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 261 7e-70
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 260 1e-69
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 259 3e-69
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 258 3e-69
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 257 1e-68
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 255 3e-68
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 254 4e-68
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 254 8e-68
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 252 3e-67
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 251 5e-67
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 251 6e-67
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 251 6e-67
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 250 1e-66
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 249 2e-66
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 249 2e-66
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 249 2e-66
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 248 4e-66
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 248 4e-66
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 248 4e-66
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 248 5e-66
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 246 1e-65
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 246 2e-65
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 245 3e-65
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 245 4e-65
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 244 4e-65
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 242 3e-64
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 242 3e-64
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 241 4e-64
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 241 5e-64
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 241 5e-64
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 241 6e-64
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 241 8e-64
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 239 2e-63
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 238 3e-63
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 238 4e-63
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 238 4e-63
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 238 4e-63
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 238 5e-63
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 238 5e-63
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 237 9e-63
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 237 9e-63
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 236 2e-62
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 236 2e-62
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 236 2e-62
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 236 2e-62
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 236 2e-62
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 235 4e-62
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 234 5e-62
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 234 7e-62
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 233 1e-61
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 233 1e-61
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 233 2e-61
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 233 2e-61
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 233 2e-61
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 233 2e-61
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 232 3e-61
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 232 4e-61
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 231 4e-61
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 231 6e-61
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 231 6e-61
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 231 7e-61
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 231 8e-61
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 230 9e-61
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 230 1e-60
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 229 2e-60
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 229 2e-60
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 228 4e-60
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 228 5e-60
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 225 3e-59
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 225 4e-59
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 225 4e-59
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 225 4e-59
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 225 4e-59
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 225 4e-59
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 224 9e-59
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 222 3e-58
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 222 4e-58
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 221 4e-58
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 221 4e-58
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 221 7e-58
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 220 9e-58
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 220 1e-57
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 220 1e-57
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 219 2e-57
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 219 3e-57
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 218 4e-57
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 218 5e-57
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 218 6e-57
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 217 8e-57
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 216 2e-56
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 216 2e-56
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 214 5e-56
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 214 7e-56
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 214 7e-56
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 213 1e-55
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 213 2e-55
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 213 2e-55
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 212 2e-55
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 212 3e-55
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 211 4e-55
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 211 5e-55
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 211 6e-55
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 211 7e-55
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 211 9e-55
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 210 1e-54
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 210 1e-54
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 209 2e-54
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 209 3e-54
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 208 4e-54
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 207 6e-54
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 207 8e-54
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 207 8e-54
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 207 8e-54
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 206 1e-53
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 205 4e-53
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 205 4e-53
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 204 6e-53
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 203 1e-52
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 203 1e-52
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 203 1e-52
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 202 2e-52
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 202 2e-52
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 202 2e-52
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 202 2e-52
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 202 3e-52
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 202 3e-52
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 202 4e-52
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 201 6e-52
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 201 9e-52
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 199 2e-51
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 199 2e-51
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 199 3e-51
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 198 4e-51
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 198 4e-51
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 197 7e-51
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 197 1e-50
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 196 1e-50
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 196 2e-50
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 195 4e-50
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 194 6e-50
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 194 6e-50
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 194 8e-50
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 194 8e-50
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 193 1e-49
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 193 1e-49
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 191 9e-49
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 190 1e-48
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 189 2e-48
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 186 2e-47
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 182 3e-46
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 182 3e-46
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 182 3e-46
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 179 3e-45
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 175 4e-44
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 174 7e-44
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 173 2e-43
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 173 2e-43
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 171 8e-43
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 170 2e-42
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 169 2e-42
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 169 4e-42
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 166 2e-41
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 162 4e-40
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 154 7e-38
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 154 8e-38
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 142 4e-34
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 137 2e-32
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 117 9e-27
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 117 1e-26
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 113 2e-25
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 5e-25
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 109 3e-24
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 4e-24
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 5e-24
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 5e-23
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 2e-22
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 3e-22
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 3e-22
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 102 4e-22
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 102 4e-22
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 5e-22
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 2e-21
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 2e-21
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 2e-21
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 5e-21
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 99 5e-21
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 7e-21
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 1e-20
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 1e-20
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 2e-20
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 97 2e-20
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 97 2e-20
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 96 3e-20
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 96 3e-20
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 4e-20
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 4e-20
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 4e-20
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 4e-20
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 96 5e-20
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 6e-20
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 8e-20
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 9e-20
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 9e-20
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 94 2e-19
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 2e-19
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 3e-19
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 3e-19
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 3e-19
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 3e-19
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 4e-19
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 7e-19
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 8e-19
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 8e-19
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 1e-18
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 1e-18
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 90 2e-18
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 3e-18
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 3e-18
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 89 3e-18
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 1e-17
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 1e-17
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 1e-17
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 1e-17
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 87 2e-17
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 2e-17
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 3e-17
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 86 4e-17
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 4e-17
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 4e-17
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 86 4e-17
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 86 4e-17
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 86 4e-17
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 7e-17
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 1e-16
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 84 2e-16
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 83 3e-16
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 4e-16
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 4e-16
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 8e-16
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 81 8e-16
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 1e-15
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 81 1e-15
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 1e-15
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 1e-15
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 2e-15
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 80 2e-15
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 2e-15
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 80 2e-15
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 79 4e-15
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 4e-15
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 78 9e-15
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 1e-14
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 77 2e-14
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 77 2e-14
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 77 2e-14
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 76 3e-14
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 3e-14
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 4e-14
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 5e-14
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 6e-14
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 6e-14
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 7e-14
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 75 7e-14
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 7e-14
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 75 8e-14
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 75 9e-14
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 74 2e-13
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 2e-13
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 3e-13
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 3e-13
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 3e-13
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 3e-13
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 4e-13
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 4e-13
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 4e-13
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 72 4e-13
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 5e-13
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 6e-13
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 72 6e-13
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 8e-13
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 9e-13
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 2e-12
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 70 3e-12
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 70 3e-12
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 3e-12
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 4e-12
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 5e-12
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 5e-12
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 5e-12
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 6e-12
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 6e-12
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 69 6e-12
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 6e-12
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 7e-12
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 8e-12
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 9e-12
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 9e-12
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 68 9e-12
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 1e-11
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 1e-11
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 1e-11
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 1e-11
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 1e-11
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 2e-11
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 3e-11
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 66 4e-11
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 5e-11
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 65 5e-11
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 9e-11
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 2e-10
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 64 2e-10
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 3e-10
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 3e-10
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 4e-10
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 4e-10
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 4e-10
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 4e-10
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 5e-10
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 7e-10
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 7e-10
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 7e-10
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 7e-10
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 62 8e-10
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 9e-10
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 1e-09
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 61 1e-09
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 1e-09
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 2e-09
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 60 3e-09
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 3e-09
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 59 4e-09
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 6e-09
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 8e-09
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 9e-09
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 4e-08
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 4e-08
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 4e-08
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 4e-08
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 6e-08
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 7e-08
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 7e-08
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 9e-08
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 54 1e-07
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 54 2e-07
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 54 2e-07
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 2e-07
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 3e-07
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 3e-07
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 4e-07
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 4e-07
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 5e-07
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 5e-07
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 6e-07
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 52 8e-07
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 8e-07
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 52 9e-07
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 1e-06
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 1e-06
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 2e-06
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 50 2e-06
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 50 3e-06
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 48 9e-06
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 452 bits (1163), Expect = e-127, Method: Compositional matrix adjust.
Identities = 209/345 (60%), Positives = 272/345 (78%), Gaps = 1/345 (0%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLF 60
MP+RN+ SWNA++ G VK GDL +A+ +FD MP+++++S+T+MIDGYAK GDM +AR LF
Sbjct: 202 MPERNLGSWNALVDGLVKSGDLVNAKKLFDEMPKRDIISYTSMIDGYAKGGDMVSARDLF 261
Query: 61 EQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLE 120
E+A DV AWSALI GY QNGQPN+A KVF EM +KNVKPDEFI+V LMSA SQ+G E
Sbjct: 262 EEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDEFIMVGLMSACSQMGCFE 321
Query: 121 LAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGL 180
L + VDSY+ + +V+ AL+DMNAKCG+MDRA KLF+EMP+RDLVSYCSM++G+
Sbjct: 322 LCEKVDSYLHQRMNKFSSHYVVPALIDMNAKCGHMDRAAKLFEEMPQRDLVSYCSMMEGM 381
Query: 181 SIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPS 240
+IHGCG +A+RLF M+ EG+VPDEVAFT+IL C S LV+EG YF+ M++KY I S
Sbjct: 382 AIHGCGSEAIRLFEKMVDEGIVPDEVAFTVILKVCGQSRLVEEGLRYFELMRKKYSILAS 441
Query: 241 PDHFACMVDLLSRSGHLGDAYELMKSM-HEPHAGAWGALLGACKLHGDSDLGEIVANQLF 299
PDH++C+V+LLSR+G L +AYEL+KSM E HA AWG+LLG C LHG++++ E+VA LF
Sbjct: 442 PDHYSCIVNLLSRTGKLKEAYELIKSMPFEAHASAWGSLLGGCSLHGNTEIAEVVARHLF 501
Query: 300 ELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQKIPGCS 344
ELEPQ+A +Y+LLSNIYAA +RW DV+ +R +M E + KI G S
Sbjct: 502 ELEPQSAGSYVLLSNIYAALDRWTDVAHLRDKMNENGITKICGRS 546
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 120/284 (42%), Gaps = 71/284 (25%)
Query: 34 EKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLE 93
+K+VV T+ +D Y K D+ +AR +F + E++ V+W+AL+ YV++G+ +A +F
Sbjct: 142 DKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVVAYVKSGELEEAKSMFDL 201
Query: 94 MESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCG 153
M +N L W AL+D K G
Sbjct: 202 MPERN----------------------LGSW------------------NALVDGLVKSG 221
Query: 154 NMDRALKLFKEMPKRDLVSYCSMIQGLSI------------------------------- 182
++ A KLF EMPKRD++SY SMI G +
Sbjct: 222 DLVNAKKLFDEMPKRDIISYTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQ 281
Query: 183 HGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPD 242
+G +A ++F+ M + + PDE +++ACS G + + Q+ S
Sbjct: 282 NGQPNEAFKVFSEMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHY 341
Query: 243 HFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHG 286
++D+ ++ GH+ A +L + M + ++ +++ +HG
Sbjct: 342 VVPALIDMNAKCGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHG 385
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 319 bits (817), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 156/345 (45%), Positives = 233/345 (67%), Gaps = 2/345 (0%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLF 60
MP+RN SWNAML G+V+ + A+ +FD MP +NV ++ TMI GYA+ G ++ A+ LF
Sbjct: 307 MPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLF 366
Query: 61 EQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLE 120
++ ++D V+W+A+I+GY Q+G +AL++F++ME + + + S +S + + LE
Sbjct: 367 DKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALE 426
Query: 121 LAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGL 180
L + + + K + V ALL M KCG+++ A LFKEM +D+VS+ +MI G
Sbjct: 427 LGKQLHGRLVKGGYETGC-FVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGY 485
Query: 181 SIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPS 240
S HG GE A+R F SM EGL PD+ +L+ACSH+GLVD+G YF +M Q YG+ P+
Sbjct: 486 SRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPN 545
Query: 241 PDHFACMVDLLSRSGHLGDAYELMKSM-HEPHAGAWGALLGACKLHGDSDLGEIVANQLF 299
H+ACMVDLL R+G L DA+ LMK+M EP A WG LLGA ++HG+++L E A+++F
Sbjct: 546 SQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIF 605
Query: 300 ELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQKIPGCS 344
+EP+N+ Y+LLSN+YA++ RW DV +R RMR++ V+K+PG S
Sbjct: 606 AMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYS 650
Score = 117 bits (294), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 144/298 (48%), Gaps = 49/298 (16%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLF 60
MP+R++ SWN M+ G+V++ +L AR +F+ MPE++V S+ TM+ GYA+ G + AR +F
Sbjct: 121 MPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVF 180
Query: 61 EQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVS----LMSATSQL 116
++ EK+ V+W+AL+S YVQN + +A +F E+ + LVS L +
Sbjct: 181 DRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSREN-------WALVSWNCLLGGFVKKK 233
Query: 117 GHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSM 176
+E Q+ DS + + ++ A+ G +D A +LF E P +D+ ++ +M
Sbjct: 234 KIVEARQFFDSMNVRDVVSWN------TIITGYAQSGKIDEARQLFDESPVQDVFTWTAM 287
Query: 177 IQGLSIHGCGEDAVRLFNSM----------LMEGLVPDE-----------------VAFT 209
+ G + E+A LF+ M ++ G V E +
Sbjct: 288 VSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTWN 347
Query: 210 IILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSM 267
++T + G + E N F M ++ P +A M+ S+SGH +A L M
Sbjct: 348 TMITGYAQCGKISEAKNLFDKMPKR-----DPVSWAAMIAGYSQSGHSFEALRLFVQM 400
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 153/317 (48%), Gaps = 29/317 (9%)
Query: 5 NVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQAT 64
++ WN + +++ G + A VF MP + VS+ MI GY + G+ AR LF++
Sbjct: 63 DIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMP 122
Query: 65 EKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQW 124
E+D+V+W+ +I GYV+N +A ++F M ++V +++S +Q G ++ A+
Sbjct: 123 ERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCS----WNTMLSGYAQNGCVDDARS 178
Query: 125 V-DSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIH 183
V D K+ + ALL + M+ A LFK LVS+ ++ G
Sbjct: 179 VFDRMPEKNDVSWN------ALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKK 232
Query: 184 GCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDH 243
+A + F+SM V D V++ I+T + SG +DE +Q + SP D
Sbjct: 233 KKIVEARQFFDSM----NVRDVVSWNTIITGYAQSGKIDEA-------RQLFDESPVQDV 281
Query: 244 F--ACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHGDSDLGEIVANQLFEL 301
F MV ++ + +A EL M E + +W A+L A + G+ +A +LF++
Sbjct: 282 FTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAML-AGYVQGER---MEMAKELFDV 337
Query: 302 EP-QNAANYILLSNIYA 317
P +N + + + YA
Sbjct: 338 MPCRNVSTWNTMITGYA 354
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 114/239 (47%), Gaps = 22/239 (9%)
Query: 65 EKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQW 124
+ D+ W+ IS Y++ G+ N+AL+VF M + ++S + G ELA+
Sbjct: 61 DSDIKEWNVAISSYMRTGRCNEALRVFKRMP----RWSSVSYNGMISGYLRNGEFELARK 116
Query: 125 VDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHG 184
+ + DL +V ++ + N+ +A +LF+ MP+RD+ S+ +M+ G + +G
Sbjct: 117 L--FDEMPERDLVSWNV---MIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNG 171
Query: 185 CGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHF 244
C +DA +F+ M + ++V++ +L+A + ++E F+S + +S +
Sbjct: 172 CVDDARSVFDRMPEK----NDVSWNALLSAYVQNSKMEEACMLFKSRENWALVS-----W 222
Query: 245 ACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHGDSDLGEIVANQLFELEP 303
C++ + + +A + SM+ +W ++ G D A QLF+ P
Sbjct: 223 NCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKID----EARQLFDESP 277
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 317 bits (813), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 156/344 (45%), Positives = 230/344 (66%), Gaps = 3/344 (0%)
Query: 5 NVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQAT 64
N+ NAML + K G + A+ +FDAM EK+ V++TTM+DGYA + D AAR +
Sbjct: 266 NLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMP 325
Query: 65 EKDVVAWSALISGYVQNGQPNQALKVFLEME-SKNVKPDEFILVSLMSATSQLGHLELAQ 123
+KD+VAW+ALIS Y QNG+PN+AL VF E++ KN+K ++ LVS +SA +Q+G LEL +
Sbjct: 326 QKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGR 385
Query: 124 WVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIH 183
W+ SY+ K I + HV +AL+ M +KCG+++++ ++F + KRD+ + +MI GL++H
Sbjct: 386 WIHSYIKKHGIRMNF-HVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMH 444
Query: 184 GCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDH 243
GCG +AV +F M + P+ V FT + ACSH+GLVDE + F M+ YGI P H
Sbjct: 445 GCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKH 504
Query: 244 FACMVDLLSRSGHLGDAYELMKSMH-EPHAGAWGALLGACKLHGDSDLGEIVANQLFELE 302
+AC+VD+L RSG+L A + +++M P WGALLGACK+H + +L E+ +L ELE
Sbjct: 505 YACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELE 564
Query: 303 PQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQKIPGCSKL 346
P+N ++LLSNIYA +W +VS +R MR ++K PGCS +
Sbjct: 565 PRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSI 608
Score = 131 bits (329), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 163/316 (51%), Gaps = 38/316 (12%)
Query: 36 NVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEME 95
+V ++I Y GD+ +A +F EKDVV+W+++I+G+VQ G P++AL++F +ME
Sbjct: 165 DVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKME 224
Query: 96 SKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNM 155
S++VK +V ++SA +++ +LE + V SY+ ++ +++ + A+LDM KCG++
Sbjct: 225 SEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLT-LANAMLDMYTKCGSI 283
Query: 156 DRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLV------------- 202
+ A +LF M ++D V++ +M+ G +I E A + NSM + +V
Sbjct: 284 EDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNG 343
Query: 203 -PDE------------------VAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDH 243
P+E + L+AC+ G ++ G + S +K+GI +
Sbjct: 344 KPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELG-RWIHSYIKKHGIRMNFHV 402
Query: 244 FACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHGDSDLGEIVANQLFELEP 303
+ ++ + S+ G L + E+ S+ + W A++G +HG G + ++++
Sbjct: 403 TSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHG---CGNEAVDMFYKMQE 459
Query: 304 QNA-ANYILLSNIYAA 318
N N + +N++ A
Sbjct: 460 ANVKPNGVTFTNVFCA 475
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 116/247 (46%), Gaps = 9/247 (3%)
Query: 56 ARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKN-VKPDEFILVSLMSATS 114
AR +F++ + + AW+ LI Y P ++ FL+M S++ P+++ L+ A +
Sbjct: 83 ARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAA 142
Query: 115 QLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYC 174
++ L L Q + KS++ V +L+ CG++D A K+F + ++D+VS+
Sbjct: 143 EVSSLSLGQSLHGMAVKSAVG-SDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWN 201
Query: 175 SMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEG---WNYFQSM 231
SMI G G + A+ LF M E + V +L+AC+ ++ G +Y +
Sbjct: 202 SMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEEN 261
Query: 232 KQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHGDSDLG 291
+ ++ + M+D+ ++ G + DA L +M E W +L + D +
Sbjct: 262 RVNVNLTLA----NAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAA 317
Query: 292 EIVANQL 298
V N +
Sbjct: 318 REVLNSM 324
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 306 bits (784), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 147/349 (42%), Positives = 238/349 (68%), Gaps = 4/349 (1%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLF 60
MPQR++ SWN ML G+ + ++S A +F+ MPE+N VS++TM+ GY+KAGDM AR +F
Sbjct: 211 MPQRDLISWNTMLDGYARCREMSKAFELFEKMPERNTVSWSTMVMGYSKAGDMEMARVMF 270
Query: 61 EQAT--EKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGH 118
++ K+VV W+ +I+GY + G +A ++ +M + +K D ++S+++A ++ G
Sbjct: 271 DKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGL 330
Query: 119 LELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQ 178
L L + S + +S++ +V+ ALLDM AKCGN+ +A +F ++PK+DLVS+ +M+
Sbjct: 331 LSLGMRIHSILKRSNLG-SNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLH 389
Query: 179 GLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGIS 238
GL +HG G++A+ LF+ M EG+ PD+V F +L +C+H+GL+DEG +YF SM++ Y +
Sbjct: 390 GLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLV 449
Query: 239 PSPDHFACMVDLLSRSGHLGDAYELMKSM-HEPHAGAWGALLGACKLHGDSDLGEIVANQ 297
P +H+ C+VDLL R G L +A +++++M EP+ WGALLGAC++H + D+ + V +
Sbjct: 450 PQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGACRMHNEVDIAKEVLDN 509
Query: 298 LFELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQKIPGCSKL 346
L +L+P + NY LLSNIYAAAE W V+ +RS+M+ V+K G S +
Sbjct: 510 LVKLDPCDPGNYSLLSNIYAAAEDWEGVADIRSKMKSMGVEKPSGASSV 558
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 138/281 (49%), Gaps = 45/281 (16%)
Query: 10 NAMLCGFVKDGDLS--SARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKD 67
NA++ + + G L A +F+ M E++ VS+ +M+ G KAG++ AR LF++ ++D
Sbjct: 156 NALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARRLFDEMPQRD 215
Query: 68 VVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDS 127
+++W+ ++ GY + + ++A ++F +M +N ++ +T +G+
Sbjct: 216 LISWNTMLDGYARCREMSKAFELFEKMPERN---------TVSWSTMVMGY--------- 257
Query: 128 YVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEM--PKRDLVSYCSMIQGLSIHGC 185
+K G+M+ A +F +M P +++V++ +I G + G
Sbjct: 258 ----------------------SKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGL 295
Query: 186 GEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFA 245
++A RL + M+ GL D A IL AC+ SGL+ G S+ ++ + +
Sbjct: 296 LKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMR-IHSILKRSNLGSNAYVLN 354
Query: 246 CMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHG 286
++D+ ++ G+L A+++ + + +W +L +HG
Sbjct: 355 ALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHG 395
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 122/275 (44%), Gaps = 52/275 (18%)
Query: 59 LFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGH 118
+F Q E +V ++LI + QN QP QA VF EM+ + D F L+ A S
Sbjct: 73 VFNQVQEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSW 132
Query: 119 LELAQWVDSYVSKSSIDLQQD-HVIAALLDMNAKCGNM--DRALKLFKEMPKRDLVSYCS 175
L + + + +++ K + L D +V AL+D ++CG + A+KLF++M +RD VS+ S
Sbjct: 133 LPVVKMMHNHIEK--LGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNS 190
Query: 176 MIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKY 235
M+ GL G DA RLF+ M L+ WN
Sbjct: 191 MLGGLVKAGELRDARRLFDEMPQRDLI---------------------SWN--------- 220
Query: 236 GISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHGDSDLGEIVA 295
M+D +R + A+EL + M E + +W ++ GD ++ ++
Sbjct: 221 ----------TMLDGYARCREMSKAFELFEKMPERNTVSWSTMVMGYSKAGDMEMARVMF 270
Query: 296 NQLFELEPQNAANYILLSNIYA------AAERWID 324
+++ L +N + ++ YA A+R +D
Sbjct: 271 DKM-PLPAKNVVTWTIIIAGYAEKGLLKEADRLVD 304
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 305 bits (780), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 151/339 (44%), Positives = 218/339 (64%), Gaps = 5/339 (1%)
Query: 10 NAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVV 69
N M+ +VK + AR VFD MPE++V+S+T +I YA+ G+M A LFE KD+V
Sbjct: 188 NTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESLPTKDMV 247
Query: 70 AWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYV 129
AW+A+++G+ QN +P +AL+ F ME ++ DE + +SA +QLG + A
Sbjct: 248 AWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRAVQIA 307
Query: 130 SKSSIDLQQDHVI--AALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGE 187
KS DHV+ +AL+DM +KCGN++ A+ +F M +++ +Y SMI GL+ HG +
Sbjct: 308 QKSGYS-PSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGRAQ 366
Query: 188 DAVRLFNSMLMEGLV-PDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFAC 246
+A+ LF+ M+ + + P+ V F L ACSHSGLVD+G F SM Q +G+ P+ DH+ C
Sbjct: 367 EALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDHYTC 426
Query: 247 MVDLLSRSGHLGDAYELMKSMH-EPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQN 305
MVDLL R+G L +A EL+K+M EPH G WGALLGAC++H + ++ EI A LFELEP
Sbjct: 427 MVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNPEIAEIAAEHLFELEPDI 486
Query: 306 AANYILLSNIYAAAERWIDVSLVRSRMRERSVQKIPGCS 344
NYILLSN+YA+A W V VR ++E+ ++K P S
Sbjct: 487 IGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVS 525
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 124/264 (46%), Gaps = 35/264 (13%)
Query: 56 ARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQ 115
AR + E ++ W+A+I GY G+ ++A+ ++ M + + P F +L+ A
Sbjct: 102 ARRVIEPVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGT 161
Query: 116 LGHLELAQ--------------------WVDSYVSKSSID--------LQQDHVIA--AL 145
+ L L + +D YV SID + + VI+ L
Sbjct: 162 MKDLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTEL 221
Query: 146 LDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDE 205
+ A+ GNM+ A +LF+ +P +D+V++ +M+ G + + ++A+ F+ M G+ DE
Sbjct: 222 IAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADE 281
Query: 206 VAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHF---ACMVDLLSRSGHLGDAYE 262
V ++AC+ G Q + QK G SPS DH + ++D+ S+ G++ +A
Sbjct: 282 VTVAGYISACAQLGASKYADRAVQ-IAQKSGYSPS-DHVVIGSALIDMYSKCGNVEEAVN 339
Query: 263 LMKSMHEPHAGAWGALLGACKLHG 286
+ SM+ + + +++ HG
Sbjct: 340 VFMSMNNKNVFTYSSMILGLATHG 363
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 297 bits (760), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 144/338 (42%), Positives = 214/338 (63%), Gaps = 2/338 (0%)
Query: 10 NAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVV 69
NA++ F K GD+ AR +FD + ++ +VS+TTMI GYA+ G + +R LF+ EKDVV
Sbjct: 296 NALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVV 355
Query: 70 AWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYV 129
W+A+I G VQ + AL +F EM++ N KPDE ++ +SA SQLG L++ W+ Y+
Sbjct: 356 LWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYI 415
Query: 130 SKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDA 189
K S+ L + +L+DM AKCGN+ AL +F + R+ ++Y ++I GL++HG A
Sbjct: 416 EKYSLSLNVA-LGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTA 474
Query: 190 VRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVD 249
+ FN M+ G+ PDE+ F +L+AC H G++ G +YF MK ++ ++P H++ MVD
Sbjct: 475 ISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVD 534
Query: 250 LLSRSGHLGDAYELMKSM-HEPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAAN 308
LL R+G L +A LM+SM E A WGALL C++HG+ +LGE A +L EL+P ++
Sbjct: 535 LLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLELDPSDSGI 594
Query: 309 YILLSNIYAAAERWIDVSLVRSRMRERSVQKIPGCSKL 346
Y+LL +Y A W D R M ER V+KIPGCS +
Sbjct: 595 YVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSI 632
Score = 118 bits (295), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 146/322 (45%), Gaps = 64/322 (19%)
Query: 10 NAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVV 69
NA + F GD+ +AR VFD P +++VS+ +I+GY K
Sbjct: 195 NASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKI------------------- 235
Query: 70 AWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYV 129
G+ +A+ V+ MES+ VKPD+ ++ L+S+ S LG L + YV
Sbjct: 236 ------------GEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYV 283
Query: 130 SKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGC---- 185
++ + + ++ AL+DM +KCG++ A ++F + KR +VS+ +MI G + G
Sbjct: 284 KENGLRMTIP-LVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVS 342
Query: 186 ---------------------------GEDAVRLFNSMLMEGLVPDEVAFTIILTACSHS 218
G+DA+ LF M PDE+ L+ACS
Sbjct: 343 RKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQL 402
Query: 219 GLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGAL 278
G +D G + +KY +S + +VD+ ++ G++ +A + + ++ + A+
Sbjct: 403 GALDVGI-WIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAI 461
Query: 279 LGACKLHGDSDLGEIVANQLFE 300
+G LHGD+ N++ +
Sbjct: 462 IGGLALHGDASTAISYFNEMID 483
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 117/237 (49%), Gaps = 9/237 (3%)
Query: 67 DVVAWSALISGYVQNGQPNQALKVFLEMESKNV---KPDEFILVSLMSATSQLGHLELAQ 123
++ +W+ I G+ ++ P ++ ++ +M +PD F L + L L
Sbjct: 117 NIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGH 176
Query: 124 WVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIH 183
+ +V K ++L HV A + M A CG+M+ A K+F E P RDLVS+ +I G
Sbjct: 177 MILGHVLKLRLELVS-HVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKI 235
Query: 184 GCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDH 243
G E A+ ++ M EG+ PD+V ++++CS G ++ G +++ +K+ G+ +
Sbjct: 236 GEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKEN-GLRMTIPL 294
Query: 244 FACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHGDSDLGEIVANQLFE 300
++D+ S+ G + +A + ++ + +W ++ G D V+ +LF+
Sbjct: 295 VNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLD----VSRKLFD 347
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 293 bits (751), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 146/334 (43%), Positives = 224/334 (67%), Gaps = 4/334 (1%)
Query: 16 FVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALI 75
+ K GD+ SA+ VFD MPE+++VS T MI YAK G++ AAR LF+ E+D+V+W+ +I
Sbjct: 171 YAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMI 230
Query: 76 SGYVQNGQPNQALKVFLEMESK-NVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSI 134
GY Q+G PN AL +F ++ ++ KPDE +V+ +SA SQ+G LE +W+ +V S I
Sbjct: 231 DGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRI 290
Query: 135 DLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFN 194
L V L+DM +KCG+++ A+ +F + P++D+V++ +MI G ++HG +DA+RLFN
Sbjct: 291 RLNVK-VCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFN 349
Query: 195 SML-MEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSR 253
M + GL P ++ F L AC+H+GLV+EG F+SM Q+YGI P +H+ C+V LL R
Sbjct: 350 EMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGR 409
Query: 254 SGHLGDAYELMKSMH-EPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILL 312
+G L AYE +K+M+ + + W ++LG+CKLHGD LG+ +A L L +N+ Y+LL
Sbjct: 410 AGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLL 469
Query: 313 SNIYAAAERWIDVSLVRSRMRERSVQKIPGCSKL 346
SNIYA+ + V+ VR+ M+E+ + K PG S +
Sbjct: 470 SNIYASVGDYEGVAKVRNLMKEKGIVKEPGISTI 503
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 122/275 (44%), Gaps = 38/275 (13%)
Query: 46 GYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFI 105
YA G + + LF Q + D+ ++A I+ NG +QA +++++ S + P+EF
Sbjct: 73 AYASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFT 132
Query: 106 LVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEM 165
SL+ + S + + + ++V K + + +V L+D+ AK G++ A K+F M
Sbjct: 133 FSSLLKSCST----KSGKLIHTHVLKFGLGID-PYVATGLVDVYAKGGDVVSAQKVFDRM 187
Query: 166 PK-------------------------------RDLVSYCSMIQGLSIHGCGEDAVRLFN 194
P+ RD+VS+ MI G + HG DA+ LF
Sbjct: 188 PERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQ 247
Query: 195 SMLMEGL-VPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSR 253
+L EG PDE+ L+ACS G ++ G + + I + ++D+ S+
Sbjct: 248 KLLAEGKPKPDEITVVAALSACSQIGALETG-RWIHVFVKSSRIRLNVKVCTGLIDMYSK 306
Query: 254 SGHLGDAYELMKSMHEPHAGAWGALLGACKLHGDS 288
G L +A + AW A++ +HG S
Sbjct: 307 CGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYS 341
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 292 bits (748), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 146/346 (42%), Positives = 219/346 (63%), Gaps = 3/346 (0%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLF 60
M ++N SWNAM+ G+++ GDL A F P + VV++T MI GY KA + A +F
Sbjct: 181 MMEKNEVSWNAMISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMF 240
Query: 61 EQAT-EKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHL 119
+ T K++V W+A+ISGYV+N +P LK+F M + ++P+ L S + S+L L
Sbjct: 241 KDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSAL 300
Query: 120 ELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQG 179
+L + + VSKS++ + +L+ M KCG + A KLF+ M K+D+V++ +MI G
Sbjct: 301 QLGRQIHQIVSKSTL-CNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISG 359
Query: 180 LSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISP 239
+ HG + A+ LF M+ + PD + F +L AC+H+GLV+ G YF+SM + Y + P
Sbjct: 360 YAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEP 419
Query: 240 SPDHFACMVDLLSRSGHLGDAYELMKSM-HEPHAGAWGALLGACKLHGDSDLGEIVANQL 298
PDH+ CMVDLL R+G L +A +L++SM PHA +G LLGAC++H + +L E A +L
Sbjct: 420 QPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKL 479
Query: 299 FELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQKIPGCS 344
+L QNAA Y+ L+NIYA+ RW DV+ VR RM+E +V K+PG S
Sbjct: 480 LQLNSQNAAGYVQLANIYASKNRWEDVARVRKRMKESNVVKVPGYS 525
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 133/290 (45%), Gaps = 42/290 (14%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLF 60
+P+ + S+N ML +V++ + A+ FD MP K+ S+ TMI GYA+ G+M AR LF
Sbjct: 119 IPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELF 178
Query: 61 EQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLE 120
EK+ V+W+A+ISGY++ G +A F V P G +
Sbjct: 179 YSMMEKNEVSWNAMISGYIECGDLEKASHFF------KVAPVR-------------GVVA 219
Query: 121 LAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMP-KRDLVSYCSMIQG 179
+ Y+ ++L A +FK+M ++LV++ +MI G
Sbjct: 220 WTAMITGYMKAKKVEL---------------------AEAMFKDMTVNKNLVTWNAMISG 258
Query: 180 LSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISP 239
+ ED ++LF +ML EG+ P+ + L CS + G Q + K +
Sbjct: 259 YVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQ-IVSKSTLCN 317
Query: 240 SPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHGDSD 289
++ + + G LGDA++L + M + AW A++ HG++D
Sbjct: 318 DVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNAD 367
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 288 bits (736), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 152/382 (39%), Positives = 230/382 (60%), Gaps = 43/382 (11%)
Query: 5 NVASWNAMLCGFVKDGDLSSARGVFDAM-------PEKNVVSF-----TTMIDG------ 46
NV WN ++ G+ + G+ SA ++ M P+ + F TTM D
Sbjct: 84 NVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETI 143
Query: 47 ----------------------YAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQP 84
YA GD+A+A +F++ EKD+VAW+++I+G+ +NG+P
Sbjct: 144 HSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKP 203
Query: 85 NQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAA 144
+AL ++ EM SK +KPD F +VSL+SA +++G L L + V Y+ K + + H
Sbjct: 204 EEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLT-RNLHSSNV 262
Query: 145 LLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSM-LMEGLVP 203
LLD+ A+CG ++ A LF EM ++ VS+ S+I GL+++G G++A+ LF M EGL+P
Sbjct: 263 LLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLP 322
Query: 204 DEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYEL 263
E+ F IL ACSH G+V EG+ YF+ M+++Y I P +HF CMVDLL+R+G + AYE
Sbjct: 323 CEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEY 382
Query: 264 MKSM-HEPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERW 322
+KSM +P+ W LLGAC +HGDSDL E Q+ +LEP ++ +Y+LLSN+YA+ +RW
Sbjct: 383 IKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRW 442
Query: 323 IDVSLVRSRMRERSVQKIPGCS 344
DV +R +M V+K+PG S
Sbjct: 443 SDVQKIRKQMLRDGVKKVPGHS 464
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/288 (21%), Positives = 133/288 (46%), Gaps = 51/288 (17%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEK------------------------- 35
MP++++ +WN+++ GF ++G A ++ M K
Sbjct: 182 MPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLG 241
Query: 36 --------------NVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQN 81
N+ S ++D YA+ G + A+ LF++ +K+ V+W++LI G N
Sbjct: 242 KRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVN 301
Query: 82 GQPNQALKVFLEMES-KNVKPDEFILVSLMSATSQLGHL-ELAQWVDSYVSKSSIDLQQD 139
G +A+++F MES + + P E V ++ A S G + E ++ + I+ + +
Sbjct: 302 GFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIE 361
Query: 140 HVIAALLDMNAKCGNMDRALKLFKEMP-KRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLM 198
H ++D+ A+ G + +A + K MP + ++V + +++ ++HG + A F + +
Sbjct: 362 H-FGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAE--FARIQI 418
Query: 199 EGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKY---GISPSPDH 243
L P+ ++L+ S ++ W+ Q ++++ G+ P H
Sbjct: 419 LQLEPNHSGDYVLLSNMYAS---EQRWSDVQKIRKQMLRDGVKKVPGH 463
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 286 bits (731), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 137/306 (44%), Positives = 209/306 (68%), Gaps = 3/306 (0%)
Query: 41 TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVK 100
+++ YA GD+A+A +F++ EKD+VAW+++I+G+ +NG+P +AL ++ EM SK +K
Sbjct: 27 NSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIK 86
Query: 101 PDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALK 160
PD F +VSL+SA +++G L L + V Y+ K + + H LLD+ A+CG ++ A
Sbjct: 87 PDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLT-RNLHSSNVLLDLYARCGRVEEAKT 145
Query: 161 LFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSM-LMEGLVPDEVAFTIILTACSHSG 219
LF EM ++ VS+ S+I GL+++G G++A+ LF M EGL+P E+ F IL ACSH G
Sbjct: 146 LFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCG 205
Query: 220 LVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSM-HEPHAGAWGAL 278
+V EG+ YF+ M+++Y I P +HF CMVDLL+R+G + AYE +KSM +P+ W L
Sbjct: 206 MVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTL 265
Query: 279 LGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQ 338
LGAC +HGDSDL E Q+ +LEP ++ +Y+LLSN+YA+ +RW DV +R +M V+
Sbjct: 266 LGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVK 325
Query: 339 KIPGCS 344
K+PG S
Sbjct: 326 KVPGHS 331
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/288 (21%), Positives = 133/288 (46%), Gaps = 51/288 (17%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEK------------------------- 35
MP++++ +WN+++ GF ++G A ++ M K
Sbjct: 49 MPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLG 108
Query: 36 --------------NVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQN 81
N+ S ++D YA+ G + A+ LF++ +K+ V+W++LI G N
Sbjct: 109 KRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVN 168
Query: 82 GQPNQALKVFLEMES-KNVKPDEFILVSLMSATSQLGHL-ELAQWVDSYVSKSSIDLQQD 139
G +A+++F MES + + P E V ++ A S G + E ++ + I+ + +
Sbjct: 169 GFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIE 228
Query: 140 HVIAALLDMNAKCGNMDRALKLFKEMPKR-DLVSYCSMIQGLSIHGCGEDAVRLFNSMLM 198
H ++D+ A+ G + +A + K MP + ++V + +++ ++H G+ + F + +
Sbjct: 229 H-FGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVH--GDSDLAEFARIQI 285
Query: 199 EGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKY---GISPSPDH 243
L P+ ++L+ S ++ W+ Q ++++ G+ P H
Sbjct: 286 LQLEPNHSGDYVLLSNMYAS---EQRWSDVQKIRKQMLRDGVKKVPGH 330
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 82/147 (55%), Gaps = 1/147 (0%)
Query: 140 HVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLME 199
+V +LL + A CG++ A K+F +MP++DLV++ S+I G + +G E+A+ L+ M +
Sbjct: 24 YVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSK 83
Query: 200 GLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGD 259
G+ PD +L+AC+ G + G M K G++ + ++DL +R G + +
Sbjct: 84 GIKPDGFTIVSLLSACAKIGALTLGKRVHVYM-IKVGLTRNLHSSNVLLDLYARCGRVEE 142
Query: 260 AYELMKSMHEPHAGAWGALLGACKLHG 286
A L M + ++ +W +L+ ++G
Sbjct: 143 AKTLFDEMVDKNSVSWTSLIVGLAVNG 169
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 285 bits (728), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 148/347 (42%), Positives = 219/347 (63%), Gaps = 5/347 (1%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLF 60
MP ++ ASWN ++ G+V ++ AR FDAMP+KN VS+ TMI GY K GD+ +A LF
Sbjct: 227 MPLKSPASWNILIGGYVNCREMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELF 286
Query: 61 EQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKN--VKPDEFILVSLMSATSQLGH 118
++KD + + A+I+ Y QNG+P ALK+F +M +N ++PDE L S++SA SQLG+
Sbjct: 287 RLMSKKDKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGN 346
Query: 119 LELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQ 178
WV+SY+++ I + D + +L+D+ K G+ +A K+F + K+D VSY +MI
Sbjct: 347 TSFGTWVESYITEHGIKI-DDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIM 405
Query: 179 GLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGIS 238
G I+G +A LF +M+ + + P+ V FT +L+A SHSGLV EG+ F SMK + +
Sbjct: 406 GCGINGMATEANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMKD-HNLE 464
Query: 239 PSPDHFACMVDLLSRSGHLGDAYELMKSM-HEPHAGAWGALLGACKLHGDSDLGEIVANQ 297
PS DH+ MVD+L R+G L +AYEL+KSM +P+AG WGALL A LH + + GEI +
Sbjct: 465 PSADHYGIMVDMLGRAGRLEEAYELIKSMPMQPNAGVWGALLLASGLHNNVEFGEIACSH 524
Query: 298 LFELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQKIPGCS 344
+LE L+ IY++ RW D VR ++E+ + K GCS
Sbjct: 525 CVKLETDPTGYLSHLAMIYSSVGRWDDARTVRDSIKEKKLCKTLGCS 571
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 155/308 (50%), Gaps = 20/308 (6%)
Query: 16 FVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALI 75
+ + G + A+ FD + EKN VS+ +++ GY ++G++ AR +F++ EKD V+W+ +I
Sbjct: 149 YSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELDEARRVFDKIPEKDAVSWNLII 208
Query: 76 SGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQ-WVDSYVSKSSI 134
S Y + G A +F M K+ P + + L+ ++LA+ + D+ K+ +
Sbjct: 209 SSYAKKGDMGNACSLFSAMPLKS--PASWNI--LIGGYVNCREMKLARTYFDAMPQKNGV 264
Query: 135 DLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFN 194
++ K G++ A +LF+ M K+D + Y +MI + +G +DA++LF
Sbjct: 265 SW------ITMISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIACYTQNGKPKDALKLFA 318
Query: 195 SMLMEG--LVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLS 252
ML + PDE+ + +++A S G G + +S ++GI ++DL
Sbjct: 319 QMLERNSYIQPDEITLSSVVSANSQLGNTSFG-TWVESYITEHGIKIDDLLSTSLIDLYM 377
Query: 253 RSGHLGDAYELMKSMHEPHAGAWGALLGACKLHGDSDLGEIVANQLFE--LEPQNAANYI 310
+ G A+++ ++++ ++ A++ C ++G + AN LF +E + N +
Sbjct: 378 KGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGINGMA----TEANSLFTAMIEKKIPPNVV 433
Query: 311 LLSNIYAA 318
+ + +A
Sbjct: 434 TFTGLLSA 441
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 282 bits (721), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 138/347 (39%), Positives = 225/347 (64%), Gaps = 6/347 (1%)
Query: 1 MPQ-RNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFL 59
MP ++V +NAM+ GFVK GD++SAR +FD M K V+++TTMI GY D+ AAR L
Sbjct: 170 MPHVKDVVIYNAMMDGFVKSGDMTSARRLFDEMTHKTVITWTTMIHGYCNIKDIDAARKL 229
Query: 60 FEQATEKDVVAWSALISGYVQNGQPNQALKVFLEME-SKNVKPDEFILVSLMSATSQLGH 118
F+ E+++V+W+ +I GY QN QP + +++F EM+ + ++ PD+ ++S++ A S G
Sbjct: 230 FDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGA 289
Query: 119 LELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQ 178
L L +W +V + +D ++ V A+LDM +KCG +++A ++F EMP++ + S+ +MI
Sbjct: 290 LSLGEWCHCFVQRKKLD-KKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIH 348
Query: 179 GLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGIS 238
G +++G A+ LF +M++E PDE+ ++TAC+H GLV+EG +F M++ G++
Sbjct: 349 GYALNGNARAALDLFVTMMIEE-KPDEITMLAVITACNHGGLVEEGRKWFHVMRE-MGLN 406
Query: 239 PSPDHFACMVDLLSRSGHLGDAYELMKSM-HEPHAGAWGALLGACKLHGDSDLGEIVANQ 297
+H+ CMVDLL R+G L +A +L+ +M EP+ + L AC + D + E + +
Sbjct: 407 AKIEHYGCMVDLLGRAGSLKEAEDLITNMPFEPNGIILSSFLSACGQYKDIERAERILKK 466
Query: 298 LFELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQKIPGCS 344
ELEPQN NY+LL N+YAA +RW D +V++ MR+ +K GCS
Sbjct: 467 AVELEPQNDGNYVLLRNLYAADKRWDDFGMVKNVMRKNQAKKEVGCS 513
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 129/266 (48%), Gaps = 13/266 (4%)
Query: 41 TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVK 100
T ++D YAK G M AR F++ + V+W+ALISGY++ G+ + A K+F +M +VK
Sbjct: 117 TGVVDMYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQM--PHVK 174
Query: 101 PDEFILVSLMSATSQLGHLELAQWV-DSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRAL 159
D I ++M + G + A+ + D K+ I ++ ++D A
Sbjct: 175 -DVVIYNAMMDGFVKSGDMTSARRLFDEMTHKTVI------TWTTMIHGYCNIKDIDAAR 227
Query: 160 KLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSM-LMEGLVPDEVAFTIILTACSHS 218
KLF MP+R+LVS+ +MI G + ++ +RLF M L PD+V +L A S +
Sbjct: 228 KLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDT 287
Query: 219 GLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGAL 278
G + G + Q+ + ++D+ S+ G + A + M E +W A+
Sbjct: 288 GALSLG-EWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAM 346
Query: 279 LGACKLHGDSDLG-EIVANQLFELEP 303
+ L+G++ ++ + E +P
Sbjct: 347 IHGYALNGNARAALDLFVTMMIEEKP 372
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 105/256 (41%), Gaps = 23/256 (8%)
Query: 34 EKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWS-ALISGYVQNGQPNQALKVFL 92
E NV FT + A A + AR LF+Q ++D S ++I Y++ Q + ++
Sbjct: 7 ETNVQIFTKFLVISASAVGIGYARKLFDQRPQRDDSFLSNSMIKAYLETRQYPDSFALYR 66
Query: 93 EMESKN-VKPDEFILVSLMSATS------QLGHLELAQWVDSYVSKSSIDLQQDHVIAAL 145
++ + PD F +L + S Q L W + + +V +
Sbjct: 67 DLRKETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADM-------YVSTGV 119
Query: 146 LDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDE 205
+DM AK G M A F EMP R VS+ ++I G G + A +LF+ M V D
Sbjct: 120 VDMYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQM---PHVKDV 176
Query: 206 VAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMK 265
V + ++ SG + F M K I+ + M+ + A +L
Sbjct: 177 VIYNAMMDGFVKSGDMTSARRLFDEMTHKTVIT-----WTTMIHGYCNIKDIDAARKLFD 231
Query: 266 SMHEPHAGAWGALLGA 281
+M E + +W ++G
Sbjct: 232 AMPERNLVSWNTMIGG 247
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 281 bits (719), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 133/330 (40%), Positives = 216/330 (65%), Gaps = 2/330 (0%)
Query: 18 KDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISG 77
K G+L +A+ +FD MP+++ V+ T MI+ Y++ G + A LF+ KD V W+A+I G
Sbjct: 170 KSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEALELFQDVKIKDTVCWTAMIDG 229
Query: 78 YVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQ 137
V+N + N+AL++F EM+ +NV +EF V ++SA S LG LEL +WV S+V ++L
Sbjct: 230 LVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLGALELGRWVHSFVENQRMELS 289
Query: 138 QDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSML 197
+ V AL++M ++CG+++ A ++F+ M +D++SY +MI GL++HG +A+ F M+
Sbjct: 290 -NFVGNALINMYSRCGDINEARRVFRVMRDKDVISYNTMISGLAMHGASVEAINEFRDMV 348
Query: 198 MEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHL 257
G P++V +L ACSH GL+D G F SMK+ + + P +H+ C+VDLL R G L
Sbjct: 349 NRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRL 408
Query: 258 GDAYELMKSMH-EPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIY 316
+AY ++++ EP G LL ACK+HG+ +LGE +A +LFE E ++ Y+LLSN+Y
Sbjct: 409 EEAYRFIENIPIEPDHIMLGTLLSACKIHGNMELGEKIAKRLFESENPDSGTYVLLSNLY 468
Query: 317 AAAERWIDVSLVRSRMRERSVQKIPGCSKL 346
A++ +W + + +R MR+ ++K PGCS +
Sbjct: 469 ASSGKWKESTEIRESMRDSGIEKEPGCSTI 498
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 123/261 (47%), Gaps = 37/261 (14%)
Query: 59 LFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGH 118
+F + +V ++A+I G+V +G+ + ++ M +V PD +++ S++ A
Sbjct: 83 VFSYVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKACD---- 138
Query: 119 LELAQWVDSYV------SKSSIDLQ-----------------------QDHVIAA-LLDM 148
L++ + + + V S S+ L+ +DHV A +++
Sbjct: 139 LKVCREIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINC 198
Query: 149 NAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAF 208
++CG + AL+LF+++ +D V + +MI GL + A+ LF M ME + +E
Sbjct: 199 YSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTA 258
Query: 209 TIILTACSHSGLVDEG-WNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSM 267
+L+ACS G ++ G W + Q+ +S + ++++ SR G + +A + + M
Sbjct: 259 VCVLSACSDLGALELGRWVHSFVENQRMELSNFVGN--ALINMYSRCGDINEARRVFRVM 316
Query: 268 HEPHAGAWGALLGACKLHGDS 288
+ ++ ++ +HG S
Sbjct: 317 RDKDVISYNTMISGLAMHGAS 337
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 128/283 (45%), Gaps = 52/283 (18%)
Query: 4 RNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVS--FT-------------------- 41
++ W AM+ G V++ +++ A +F M +NV + FT
Sbjct: 218 KDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLGALELGRWV 277
Query: 42 -----------------TMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQP 84
+I+ Y++ GD+ AR +F +KDV++++ +ISG +G
Sbjct: 278 HSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVISYNTMISGLAMHGAS 337
Query: 85 NQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWV-DSYVSKSSIDLQQDHVIA 143
+A+ F +M ++ +P++ LV+L++A S G L++ V +S +++ Q +H
Sbjct: 338 VEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHY-G 396
Query: 144 ALLDMNAKCGNMDRALKLFKEMP-KRDLVSYCSMIQGLSIHG---CGED-AVRLFNSMLM 198
++D+ + G ++ A + + +P + D + +++ IHG GE A RLF
Sbjct: 397 CIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGNMELGEKIAKRLF----- 451
Query: 199 EGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSP 241
E PD + ++ + SG E +SM+ GI P
Sbjct: 452 ESENPDSGTYVLLSNLYASSGKWKESTEIRESMRDS-GIEKEP 493
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 86/200 (43%), Gaps = 30/200 (15%)
Query: 106 LVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEM 165
L+S++ + + H+ + + + ++ D Q V+ L+ + + ++D A +F +
Sbjct: 32 LISVLRSCKNIAHV---PSIHAKIIRTFHD-QDAFVVFELIRVCSTLDSVDYAYDVFSYV 87
Query: 166 PKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACS-------HS 218
++ Y +MI G G D V L++ M+ ++PD T +L AC H+
Sbjct: 88 SNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKACDLKVCREIHA 147
Query: 219 GLVDEGWNYFQS----MKQKYGIS-------------PSPDHFA--CMVDLLSRSGHLGD 259
++ G+ +S M + YG S P DH A M++ S G + +
Sbjct: 148 QVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKE 207
Query: 260 AYELMKSMHEPHAGAWGALL 279
A EL + + W A++
Sbjct: 208 ALELFQDVKIKDTVCWTAMI 227
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 279 bits (713), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 128/337 (37%), Positives = 224/337 (66%), Gaps = 4/337 (1%)
Query: 10 NAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVV 69
NA++ + G++ A +F +M ++V+S+T+++ GY + G++ AR F+Q +D +
Sbjct: 275 NALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRI 334
Query: 70 AWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYV 129
+W+ +I GY++ G N++L++F EM+S + PDEF +VS+++A + LG LE+ +W+ +Y+
Sbjct: 335 SWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYI 394
Query: 130 SKSSIDLQQDHVIA-ALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGED 188
K+ I + D V+ AL+DM KCG ++A K+F +M +RD ++ +M+ GL+ +G G++
Sbjct: 395 DKNKI--KNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQE 452
Query: 189 AVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMV 248
A+++F M + PD++ + +L+AC+HSG+VD+ +F M+ + I PS H+ CMV
Sbjct: 453 AIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMV 512
Query: 249 DLLSRSGHLGDAYELMKSM-HEPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAA 307
D+L R+G + +AYE+++ M P++ WGALLGA +LH D + E+ A ++ ELEP N A
Sbjct: 513 DMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILELEPDNGA 572
Query: 308 NYILLSNIYAAAERWIDVSLVRSRMRERSVQKIPGCS 344
Y LL NIYA +RW D+ VR ++ + +++K PG S
Sbjct: 573 VYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFS 609
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 123/225 (54%), Gaps = 13/225 (5%)
Query: 36 NVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEME 95
N+ ++ Y+ G M AR +F++ ++DV +W+ +ISGY + + +++++ +EME
Sbjct: 169 NLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEME 228
Query: 96 SKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVS--KSSIDLQQDHVIAALLDMNAKCG 153
V P L+ ++SA S++ +L + V YVS K+ L+ ++ AL++ A CG
Sbjct: 229 RNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLEN---ALVNAYAACG 285
Query: 154 NMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILT 213
MD A+++F+ M RD++S+ S+++G G + A F+ M V D +++TI++
Sbjct: 286 EMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQM----PVRDRISWTIMID 341
Query: 214 ACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLG 258
+G +E F+ M+ I PD F MV +L+ HLG
Sbjct: 342 GYLRAGCFNESLEIFREMQSAGMI---PDEFT-MVSVLTACAHLG 382
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 108/253 (42%), Gaps = 9/253 (3%)
Query: 50 AGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSL 109
G ++ A LF + E DVV W+ +I G+ + + ++++L M + V PD L
Sbjct: 81 GGHVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFL 140
Query: 110 MSATSQ-LGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKR 168
++ + G L + + +V K + +V AL+ M + CG MD A +F K
Sbjct: 141 LNGLKRDGGALACGKKLHCHVVKFGLG-SNLYVQNALVKMYSLCGLMDMARGVFDRRCKE 199
Query: 169 DLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSH---SGLVDEGW 225
D+ S+ MI G + E+++ L M + P V ++L+ACS L
Sbjct: 200 DVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVH 259
Query: 226 NYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLH 285
Y K + PS +V+ + G + A + +SM +W +++
Sbjct: 260 EYVSECKTE----PSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVER 315
Query: 286 GDSDLGEIVANQL 298
G+ L +Q+
Sbjct: 316 GNLKLARTYFDQM 328
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 277 bits (708), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 143/346 (41%), Positives = 222/346 (64%), Gaps = 3/346 (0%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLF 60
MP++++ SWN+M+ G+VK G + A+G+FD MP ++VV++ TMIDGYAK G + A+ LF
Sbjct: 247 MPEKDLISWNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLF 306
Query: 61 EQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESK-NVKPDEFILVSLMSATSQLGHL 119
+Q +DVVA++++++GYVQN +AL++F +ME + ++ PD+ LV ++ A +QLG L
Sbjct: 307 DQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRL 366
Query: 120 ELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQG 179
A + Y+ + L + AL+DM +KCG++ A+ +F+ + + + + +MI G
Sbjct: 367 SKAIDMHLYIVEKQFYLGGK-LGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGG 425
Query: 180 LSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISP 239
L+IHG GE A + + L PD++ F +L ACSHSGLV EG F+ M++K+ I P
Sbjct: 426 LAIHGLGESAFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEP 485
Query: 240 SPDHFACMVDLLSRSGHLGDAYELMKSMH-EPHAGAWGALLGACKLHGDSDLGEIVANQL 298
H+ CMVD+LSRSG + A L++ M EP+ W L AC H + + GE+VA L
Sbjct: 486 RLQHYGCMVDILSRSGSIELAKNLIEEMPVEPNDVIWRTFLTACSHHKEFETGELVAKHL 545
Query: 299 FELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQKIPGCS 344
N ++Y+LLSN+YA+ W DV VR+ M+ER ++KIPGCS
Sbjct: 546 ILQAGYNPSSYVLLSNMYASFGMWKDVRRVRTMMKERKIEKIPGCS 591
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 154/298 (51%), Gaps = 19/298 (6%)
Query: 10 NAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFE--QATEKD 67
N ++ ++K G L +R +FD MP+++ VS+ +MIDGY K G + +AR LF+ K+
Sbjct: 160 NCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSARELFDLMPMEMKN 219
Query: 68 VVAWSALISGYVQNGQ-PNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVD 126
+++W+++ISGY Q + A K+F +M K D S++ + G +E A+ +
Sbjct: 220 LISWNSMISGYAQTSDGVDIASKLFADMPEK----DLISWNSMIDGYVKHGRIEDAKGLF 275
Query: 127 SYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCG 186
+ + + A ++D AK G + A LF +MP RD+V+Y SM+ G +
Sbjct: 276 DVMPRRDVV-----TWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYH 330
Query: 187 EDAVRLFNSMLMEG-LVPDEVAFTIILTACSHSGLVDEGWN-YFQSMKQKYGISPSPDHF 244
+A+ +F+ M E L+PD+ I+L A + G + + + + +++++ +
Sbjct: 331 MEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLG-- 388
Query: 245 ACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHGDSDLGEIVANQLFELE 302
++D+ S+ G + A + + + W A++G +HG LGE + L ++E
Sbjct: 389 VALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHG---LGESAFDMLLQIE 443
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 110/249 (44%), Gaps = 17/249 (6%)
Query: 60 FEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHL 119
F +D W+A+I + P QAL + M V D+F L ++ A S+LG +
Sbjct: 78 FSFGEVEDPFLWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLGFV 137
Query: 120 ELAQWVDSYVSKSSIDLQQDHVIA-ALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQ 178
+ + ++ K+ L D + L+ + KCG + + ++F MPKRD VSY SMI
Sbjct: 138 KGGMQIHGFLKKTG--LWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMID 195
Query: 179 GLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSH-SGLVDEGWNYFQSMKQKYGI 237
G G A LF+ M ME + + +++ +++ + S VD F M +K I
Sbjct: 196 GYVKCGLIVSARELFDLMPME--MKNLISWNSMISGYAQTSDGVDIASKLFADMPEKDLI 253
Query: 238 SPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHGDSDLGEI-VAN 296
S + M+D + G + DA L M W ++ G + LG + A
Sbjct: 254 S-----WNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMID-----GYAKLGFVHHAK 303
Query: 297 QLFELEPQN 305
LF+ P
Sbjct: 304 TLFDQMPHR 312
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 276 bits (705), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 137/341 (40%), Positives = 211/341 (61%), Gaps = 6/341 (1%)
Query: 10 NAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVV 69
NA + + K + AR +FD+MP +NV++ T+MI GYA A AAR +F + E++VV
Sbjct: 293 NAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVV 352
Query: 70 AWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYV 129
+W+ALI+GY QNG+ +AL +F ++ ++V P + +++ A + L L L +V
Sbjct: 353 SWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHV 412
Query: 130 SKSSIDLQ---QDHVIA--ALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHG 184
K Q +D + +L+DM KCG ++ +F++M +RD VS+ +MI G + +G
Sbjct: 413 LKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNG 472
Query: 185 CGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHF 244
G +A+ LF ML G PD + +L+AC H+G V+EG +YF SM + +G++P DH+
Sbjct: 473 YGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHY 532
Query: 245 ACMVDLLSRSGHLGDAYELMKSM-HEPHAGAWGALLGACKLHGDSDLGEIVANQLFELEP 303
CMVDLL R+G L +A +++ M +P + WG+LL ACK+H + LG+ VA +L E+EP
Sbjct: 533 TCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEP 592
Query: 304 QNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQKIPGCS 344
N+ Y+LLSN+YA +W DV VR MR+ V K PGCS
Sbjct: 593 SNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCS 633
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 117/207 (56%), Gaps = 1/207 (0%)
Query: 10 NAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVV 69
N ++ + K G L R VFD MP++N+ ++ +++ G K G + A LF E+D
Sbjct: 59 NRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQC 118
Query: 70 AWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYV 129
W++++SG+ Q+ + +AL F M + +E+ S++SA S L + V S +
Sbjct: 119 TWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLI 178
Query: 130 SKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDA 189
+KS L ++ +AL+DM +KCGN++ A ++F EM R++VS+ S+I +G +A
Sbjct: 179 AKSPF-LSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEA 237
Query: 190 VRLFNSMLMEGLVPDEVAFTIILTACS 216
+ +F ML + PDEV +++AC+
Sbjct: 238 LDVFQMMLESRVEPDEVTLASVISACA 264
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 103/230 (44%), Gaps = 48/230 (20%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVV----SF---------------- 40
M +RNV SWNA++ G+ ++G+ A +F + ++V SF
Sbjct: 346 MAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLG 405
Query: 41 -------------------------TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALI 75
++ID Y K G + +F + E+D V+W+A+I
Sbjct: 406 MQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMI 465
Query: 76 SGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQ-WVDSYVSKSSI 134
G+ QNG N+AL++F EM KPD ++ ++SA G +E + + S +
Sbjct: 466 IGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGV 525
Query: 135 DLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKR-DLVSYCSMIQGLSIH 183
+DH ++D+ + G ++ A + +EMP + D V + S++ +H
Sbjct: 526 APLRDHY-TCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVH 574
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 275 bits (704), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 132/344 (38%), Positives = 217/344 (63%), Gaps = 2/344 (0%)
Query: 2 PQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFE 61
P+ +V + NA++ ++K DL A VFD M E++V+S+ +++ GYA+ G M A+ LF
Sbjct: 140 PRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFH 199
Query: 62 QATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLEL 121
+K +V+W+A+ISGY G +A+ F EM+ ++PDE L+S++ + +QLG LEL
Sbjct: 200 LMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLEL 259
Query: 122 AQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLS 181
+W+ Y + L+Q V AL++M +KCG + +A++LF +M +D++S+ +MI G +
Sbjct: 260 GKWIHLYAERRGF-LKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYA 318
Query: 182 IHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSP 241
HG A+ FN M + P+ + F +L+ACSH G+ EG YF M+Q Y I P
Sbjct: 319 YHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKI 378
Query: 242 DHFACMVDLLSRSGHLGDAYELMKSM-HEPHAGAWGALLGACKLHGDSDLGEIVANQLFE 300
+H+ C++D+L+R+G L A E+ K+M +P + WG+LL +C+ G+ D+ + + L E
Sbjct: 379 EHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLVE 438
Query: 301 LEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQKIPGCS 344
LEP++ NY+LL+NIYA +W DVS +R +R +++K PG S
Sbjct: 439 LEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKKTPGGS 482
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 122/282 (43%), Gaps = 38/282 (13%)
Query: 41 TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVK 100
T M+D K DM A LF Q + +V ++++I Y N ++++ ++ K+ +
Sbjct: 46 TKMVDFCDKIEDMDYATRLFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFE 105
Query: 101 -PDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIA--ALLDMNAKCGNMDR 157
PD F + + + LG L + V ++ K + HV+ AL+DM K ++
Sbjct: 106 LPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFG---PRFHVVTENALIDMYMKFDDLVD 162
Query: 158 ALKLFKEMPKRD-------------------------------LVSYCSMIQGLSIHGCG 186
A K+F EM +RD +VS+ +MI G + GC
Sbjct: 163 AHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCY 222
Query: 187 EDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFAC 246
+A+ F M + G+ PDE++ +L +C+ G ++ G + ++ G
Sbjct: 223 VEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELG-KWIHLYAERRGFLKQTGVCNA 281
Query: 247 MVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHGDS 288
++++ S+ G + A +L M +W ++ HG++
Sbjct: 282 LIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNA 323
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 275 bits (704), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 134/345 (38%), Positives = 215/345 (62%), Gaps = 2/345 (0%)
Query: 2 PQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFE 61
P+R++ WN M+ G+++ G++ AR +FD MP ++V+S+ T+++GYA GDM A +F+
Sbjct: 86 PERDIVLWNTMISGYIEMGNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVFD 145
Query: 62 QATEKDVVAWSALISGYVQNGQPNQALKVFLEM-ESKNVKPDEFILVSLMSATSQLGHLE 120
E++V +W+ LI GY QNG+ ++ L F M + +V P++ + ++SA ++LG +
Sbjct: 146 DMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFD 205
Query: 121 LAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGL 180
+WV Y + +V AL+DM KCG ++ A+++FK + +RDL+S+ +MI GL
Sbjct: 206 FGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGL 265
Query: 181 SIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPS 240
+ HG G +A+ LF+ M G+ PD+V F +L AC H GLV++G YF SM + I P
Sbjct: 266 AAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPE 325
Query: 241 PDHFACMVDLLSRSGHLGDAYELMKSMH-EPHAGAWGALLGACKLHGDSDLGEIVANQLF 299
+H C+VDLLSR+G L A E + M + A W LLGA K++ D+GE+ +L
Sbjct: 326 IEHCGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVDIGEVALEELI 385
Query: 300 ELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQKIPGCS 344
+LEP+N AN+++LSNIY A R+ D + ++ MR+ +K G S
Sbjct: 386 KLEPRNPANFVMLSNIYGDAGRFDDAARLKVAMRDTGFKKEAGVS 430
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 130/282 (46%), Gaps = 54/282 (19%)
Query: 11 AMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVA 70
MLC G ++SA VF M EKNVV +T+MI+GY D+ +AR F+ + E+D+V
Sbjct: 36 GMLCLM---GVIASANKVFCEMVEKNVVLWTSMINGYLLNKDLVSARRYFDLSPERDIVL 92
Query: 71 WSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVS 130
W+ +ISGY++ G +A +F +M ++V W
Sbjct: 93 WNTMISGYIEMGNMLEARSLFDQMPCRDV----------------------MSW------ 124
Query: 131 KSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAV 190
+L+ A G+M+ ++F +MP+R++ S+ +I+G + +G + +
Sbjct: 125 ------------NTVLEGYANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVL 172
Query: 191 RLFNSMLMEG-LVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHF----- 244
F M+ EG +VP++ T++L+AC+ G D F KYG + +
Sbjct: 173 GSFKRMVDEGSVVPNDATMTLVLSACAKLGAFD-----FGKWVHKYGETLGYNKVDVNVK 227
Query: 245 ACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHG 286
++D+ + G + A E+ K + +W ++ HG
Sbjct: 228 NALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHG 269
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 275 bits (703), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 136/343 (39%), Positives = 219/343 (63%), Gaps = 11/343 (3%)
Query: 12 MLCGFVKDGDLSSARGVFD----AMPEKN-----VVSFTTMIDGYAKAGDMAAARFLFEQ 62
++CGF+KD + + + + M ++ +V + MIDGY + GD AAR LF++
Sbjct: 174 VMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDK 233
Query: 63 ATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELA 122
++ VV+W+ +ISGY NG A++VF EM+ +++P+ LVS++ A S+LG LEL
Sbjct: 234 MRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELG 293
Query: 123 QWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSI 182
+W+ Y S I + D + +AL+DM +KCG +++A+ +F+ +P+ +++++ +MI G +I
Sbjct: 294 EWLHLYAEDSGIRID-DVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAI 352
Query: 183 HGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPD 242
HG DA+ F M G+ P +VA+ +LTACSH GLV+EG YF M G+ P +
Sbjct: 353 HGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIE 412
Query: 243 HFACMVDLLSRSGHLGDAYELMKSMH-EPHAGAWGALLGACKLHGDSDLGEIVANQLFEL 301
H+ CMVDLL RSG L +A E + +M +P W ALLGAC++ G+ ++G+ VAN L ++
Sbjct: 413 HYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDM 472
Query: 302 EPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQKIPGCS 344
P ++ Y+ LSN+YA+ W +VS +R RM+E+ ++K PGCS
Sbjct: 473 VPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRKDPGCS 515
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 120/275 (43%), Gaps = 43/275 (15%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNV----------------------- 37
M QR+V SWN M+ G+ +G A VF M + ++
Sbjct: 234 MRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELG 293
Query: 38 ----------------VSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQN 81
V + +ID Y+K G + A +FE+ ++V+ WSA+I+G+ +
Sbjct: 294 EWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIH 353
Query: 82 GQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELA-QWVDSYVSKSSIDLQQDH 140
GQ A+ F +M V+P + ++L++A S G +E ++ VS ++ + +H
Sbjct: 354 GQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEH 413
Query: 141 VIAALLDMNAKCGNMDRALKLFKEMP-KRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLME 199
++D+ + G +D A + MP K D V + +++ + G E R+ N +LM+
Sbjct: 414 Y-GCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQGNVEMGKRVAN-ILMD 471
Query: 200 GLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQK 234
+ D A+ + + G E MK+K
Sbjct: 472 MVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEK 506
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/322 (20%), Positives = 136/322 (42%), Gaps = 57/322 (17%)
Query: 21 DLSSARGVF-------DAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSA 73
DLS VF D + ++ F D + + D+ A +F Q +++ +W+
Sbjct: 38 DLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHR--DLDYAHKIFNQMPQRNCFSWNT 95
Query: 74 LISGYVQNGQPNQ--ALKVFLEMESKN-VKPDEFILVSLMSATSQLGHLELAQWV----- 125
+I G+ ++ + A+ +F EM S V+P+ F S++ A ++ G ++ + +
Sbjct: 96 IIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLAL 155
Query: 126 ------DSYVSKSSID-------------------LQQDHVIAA--------------LL 146
D +V + + +++D V+ ++
Sbjct: 156 KYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMI 215
Query: 147 DMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEV 206
D + G+ A LF +M +R +VS+ +MI G S++G +DAV +F M + P+ V
Sbjct: 216 DGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYV 275
Query: 207 AFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKS 266
+L A S G ++ G + + GI + ++D+ S+ G + A + +
Sbjct: 276 TLVSVLPAISRLGSLELG-EWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFER 334
Query: 267 MHEPHAGAWGALLGACKLHGDS 288
+ + W A++ +HG +
Sbjct: 335 LPRENVITWSAMINGFAIHGQA 356
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 273 bits (699), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 130/346 (37%), Positives = 215/346 (62%), Gaps = 3/346 (0%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLF 60
MP++ SW +ML G+V++G + A +F+ MP K V++ MI G + G++A AR +F
Sbjct: 229 MPEKTEVSWTSMLMGYVQNGRIEDAEELFEVMPVKPVIACNAMISGLGQKGEIAKARRVF 288
Query: 61 EQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLE 120
+ E++ +W +I + +NG +AL +F+ M+ + V+P L+S++S + L L
Sbjct: 289 DSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLH 348
Query: 121 LAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGL 180
+ V + + + D+ +V + L+ M KCG + ++ +F P +D++ + S+I G
Sbjct: 349 HGKQVHAQLVRCQFDVDV-YVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGY 407
Query: 181 SIHGCGEDAVRLFNSMLMEGLV-PDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISP 239
+ HG GE+A+++F M + G P+EV F L+ACS++G+V+EG ++SM+ +G+ P
Sbjct: 408 ASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKP 467
Query: 240 SPDHFACMVDLLSRSGHLGDAYELMKSMH-EPHAGAWGALLGACKLHGDSDLGEIVANQL 298
H+ACMVD+L R+G +A E++ SM EP A WG+LLGAC+ H D+ E A +L
Sbjct: 468 ITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKL 527
Query: 299 FELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQKIPGCS 344
E+EP+N+ YILLSN+YA+ RW DV+ +R M+ R V+K PGCS
Sbjct: 528 IEIEPENSGTYILLSNMYASQGRWADVAELRKLMKTRLVRKSPGCS 573
Score = 121 bits (303), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 126/234 (53%), Gaps = 13/234 (5%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLF 60
MP RN+ SWN ++ G++K+G++ AR VFD MPE+NVVS+T ++ GY G + A LF
Sbjct: 74 MPDRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLF 133
Query: 61 EQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLE 120
+ EK+ V+W+ ++ G++Q+G+ + A K++ + K D S++ + G ++
Sbjct: 134 WKMPEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDK----DNIARTSMIHGLCKEGRVD 189
Query: 121 LAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGL 180
A+ + +S+ S+ V + +D A K+F MP++ VS+ SM+ G
Sbjct: 190 EAREIFDEMSERSVITWTTMVTGY-----GQNNRVDDARKIFDVMPEKTEVSWTSMLMGY 244
Query: 181 SIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQK 234
+G EDA LF M ++ + +A +++ G + + F SMK++
Sbjct: 245 VQNGRIEDAEELFEVMPVKPV----IACNAMISGLGQKGEIAKARRVFDSMKER 294
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 156/300 (52%), Gaps = 26/300 (8%)
Query: 4 RNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQA 63
++++SWN+M+ G+ + AR +FD MP++N++S+ ++ GY K G++ AR +F+
Sbjct: 46 KSISSWNSMVAGYFANLMPRDARKLFDEMPDRNIISWNGLVSGYMKNGEIDEARKVFDLM 105
Query: 64 TEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQ 123
E++VV+W+AL+ GYV NG+ + A +F +M KN +L+ + Q G ++ A
Sbjct: 106 PERNVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKVSWTVMLIGFL----QDGRIDDAC 161
Query: 124 WVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIH 183
+ + ++ + +I L K G +D A ++F EM +R ++++ +M+ G +
Sbjct: 162 KLYEMIPDKD-NIARTSMIHGL----CKEGRVDEAREIFDEMSERSVITWTTMVTGYGQN 216
Query: 184 GCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDH 243
+DA ++F+ M + EV++T +L +G +++ F+ M P
Sbjct: 217 NRVDDARKIFDVMPEK----TEVSWTSMLMGYVQNGRIEDAEELFEVM-------PVKPV 265
Query: 244 FAC--MVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHGDSDLGEIVANQLFEL 301
AC M+ L + G + A + SM E + +W ++ K+H + E+ A LF L
Sbjct: 266 IACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVI---KIHERNGF-ELEALDLFIL 321
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 121/265 (45%), Gaps = 32/265 (12%)
Query: 44 IDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDE 103
I ++ G + AR LF+ K + +W+++++GY N P A K+F EM +N+
Sbjct: 24 ITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRNI---- 79
Query: 104 FILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVI---AALLDMNAKCGNMDRALK 160
L+S + G ++ A+ V DL + + AL+ G +D A
Sbjct: 80 ISWNGLVSGYMKNGEIDEARKV--------FDLMPERNVVSWTALVKGYVHNGKVDVAES 131
Query: 161 LFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDE--VAFTIILTACSHS 218
LF +MP+++ VS+ M+ G G +DA +L+ ++PD+ +A T ++
Sbjct: 132 LFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLYE------MIPDKDNIARTSMIHGLCKE 185
Query: 219 GLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGAL 278
G VDE F M ++ I+ + MV ++ + DA ++ M E +W ++
Sbjct: 186 GRVDEAREIFDEMSERSVIT-----WTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSM 240
Query: 279 LGACKLHGDSDLGEIVANQLFELEP 303
L +G + E +LFE+ P
Sbjct: 241 LMGYVQNGRIEDAE----ELFEVMP 261
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 272 bits (696), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 132/346 (38%), Positives = 221/346 (63%), Gaps = 4/346 (1%)
Query: 3 QRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQ 62
+ +V + N+++ + G+ A +FD +PE + VS+ ++I GY KAG M A LF +
Sbjct: 147 ENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRK 206
Query: 63 ATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELA 122
EK+ ++W+ +ISGYVQ +AL++F EM++ +V+PD L + +SA +QLG LE
Sbjct: 207 MAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQG 266
Query: 123 QWVDSYVSKSSIDLQQDHVIA-ALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLS 181
+W+ SY++K+ I + D V+ L+DM AKCG M+ AL++FK + K+ + ++ ++I G +
Sbjct: 267 KWIHSYLNKTRIRM--DSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYA 324
Query: 182 IHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSP 241
HG G +A+ F M G+ P+ + FT +LTACS++GLV+EG F SM++ Y + P+
Sbjct: 325 YHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTI 384
Query: 242 DHFACMVDLLSRSGHLGDAYELMKSMH-EPHAGAWGALLGACKLHGDSDLGEIVANQLFE 300
+H+ C+VDLL R+G L +A ++ M +P+A WGALL AC++H + +LGE + L
Sbjct: 385 EHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEILIA 444
Query: 301 LEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQKIPGCSKL 346
++P + Y+ +NI+A ++W + R M+E+ V K+PGCS +
Sbjct: 445 IDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTI 490
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 272 bits (696), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 129/345 (37%), Positives = 212/345 (61%), Gaps = 2/345 (0%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLF 60
MP++ SW +ML G+ G + A F+ MP K V++ MI G+ + G+++ AR +F
Sbjct: 229 MPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVGEISKARRVF 288
Query: 61 EQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLE 120
+ ++D W +I Y + G +AL +F +M+ + V+P L+S++S + L L+
Sbjct: 289 DLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQ 348
Query: 121 LAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGL 180
+ V +++ + D +V + L+ M KCG + +A +F +D++ + S+I G
Sbjct: 349 YGRQVHAHLVRCQFD-DDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGY 407
Query: 181 SIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPS 240
+ HG GE+A+++F+ M G +P++V ILTACS++G ++EG F+SM+ K+ ++P+
Sbjct: 408 ASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPT 467
Query: 241 PDHFACMVDLLSRSGHLGDAYELMKSMH-EPHAGAWGALLGACKLHGDSDLGEIVANQLF 299
+H++C VD+L R+G + A EL++SM +P A WGALLGACK H DL E+ A +LF
Sbjct: 468 VEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLF 527
Query: 300 ELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQKIPGCS 344
E EP NA Y+LLS+I A+ +W DV++VR MR +V K PGCS
Sbjct: 528 ENEPDNAGTYVLLSSINASRSKWGDVAVVRKNMRTNNVSKFPGCS 572
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 135/282 (47%), Gaps = 46/282 (16%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLF 60
M +RNV SWN ++ G++K+ + AR VF+ MPE+NVVS+T M+ GY + G + A LF
Sbjct: 74 MSERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLF 133
Query: 61 EQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLE 120
+ E++ V+W+ + G + +G+ ++A K++ M K+V +++T+ +G L
Sbjct: 134 WRMPERNEVSWTVMFGGLIDDGRIDKARKLYDMMPVKDV----------VASTNMIGGLC 183
Query: 121 LAQWVDSYVSKSSIDLQQDHVIAALLDMNA---KCGNMDRALKLFKEMPKRDLVSYCSMI 177
VD ++ D ++ + M + +D A KLF+ MP++ VS+ SM+
Sbjct: 184 REGRVDE--ARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTSML 241
Query: 178 QGLSIHGCGEDAVRLFNSMLMEGLVP---------------------------DEVAFTI 210
G ++ G EDA F M M+ ++ D +
Sbjct: 242 LGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRG 301
Query: 211 ILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLS 252
++ A G E + F M QK G+ PS F ++ +LS
Sbjct: 302 MIKAYERKGFELEALDLFAQM-QKQGVRPS---FPSLISILS 339
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 110/218 (50%), Gaps = 13/218 (5%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLF 60
MP+RN SW M G + DG + AR ++D MP K+VV+ T MI G + G + AR +F
Sbjct: 136 MPERNEVSWTVMFGGLIDDGRIDKARKLYDMMPVKDVVASTNMIGGLCREGRVDEARLIF 195
Query: 61 EQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLE 120
++ E++VV W+ +I+GY QN + + A K+F M K E S++ + G +E
Sbjct: 196 DEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMPEKT----EVSWTSMLLGYTLSGRIE 251
Query: 121 LAQWVDSYVSKSSIDLQQDHVIA--ALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQ 178
A+ + VIA A++ + G + +A ++F M RD ++ MI+
Sbjct: 252 DAEEFFEV-------MPMKPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIK 304
Query: 179 GLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACS 216
G +A+ LF M +G+ P + IL+ C+
Sbjct: 305 AYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCA 342
Score = 104 bits (259), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 137/287 (47%), Gaps = 26/287 (9%)
Query: 4 RNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQA 63
+ + SWN+++ G+ +G AR +FD M E+NVVS+ ++ GY K + AR +FE
Sbjct: 46 KAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELM 105
Query: 64 TEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQ 123
E++VV+W+A++ GY+Q G +A +F M +N E + G ++ A+
Sbjct: 106 PERNVVSWTAMVKGYMQEGMVGEAESLFWRMPERN----EVSWTVMFGGLIDDGRIDKAR 161
Query: 124 WVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIH 183
+ + + + ++I L + G +D A +F EM +R++V++ +MI G +
Sbjct: 162 KLYDMMPVKDV-VASTNMIGGL----CREGRVDEARLIFDEMRERNVVTWTTMITGYRQN 216
Query: 184 GCGEDAVRLFNSMLMEGLVPD--EVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSP 241
+ A +LF M P+ EV++T +L + SG +++ +F+ M P
Sbjct: 217 NRVDVARKLFEVM------PEKTEVSWTSMLLGYTLSGRIEDAEEFFEVM-------PMK 263
Query: 242 DHFAC--MVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHG 286
AC M+ G + A + M + W ++ A + G
Sbjct: 264 PVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKG 310
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 138/283 (48%), Gaps = 24/283 (8%)
Query: 20 GDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYV 79
G ++ AR FD++ K + S+ +++ GY G AR LF++ +E++VV+W+ L+SGY+
Sbjct: 31 GKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVSGYI 90
Query: 80 QNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQD 139
+N +A VF M +NV ++ M +G E W ++ S +
Sbjct: 91 KNRMIVEARNVFELMPERNVVSWTAMVKGYMQE-GMVGEAESLFWRMPERNEVSWTV--- 146
Query: 140 HVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLME 199
+ L+D G +D+A KL+ MP +D+V+ +MI GL G ++A +F+ M
Sbjct: 147 -MFGGLID----DGRIDKARKLYDMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMRER 201
Query: 200 GLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGD 259
+ V +T ++T + VD F+ M +K +S + M+ + SG + D
Sbjct: 202 NV----VTWTTMITGYRQNNRVDVARKLFEVMPEKTEVS-----WTSMLLGYTLSGRIED 252
Query: 260 AYELMKSMHEPHAGAWGALLGACKLHGDSDLGEIV-ANQLFEL 301
A E + M A A+ + G ++GEI A ++F+L
Sbjct: 253 AEEFFEVMPMKPVIACNAM-----IVGFGEVGEISKARRVFDL 290
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 110/268 (41%), Gaps = 63/268 (23%)
Query: 44 IDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDE 103
I ++ G + AR F+ K + +W++++SGY NG P +A ++F EM +NV
Sbjct: 24 ISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNV---- 79
Query: 104 FILVSLMSATSQLGHLELAQW---VDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALK 160
W V Y+ I A
Sbjct: 80 ------------------VSWNGLVSGYIKNRMI---------------------VEARN 100
Query: 161 LFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGL 220
+F+ MP+R++VS+ +M++G G +A LF M +EV++T++ GL
Sbjct: 101 VFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPER----NEVSWTVMF-----GGL 151
Query: 221 VDEGWNYFQSMKQKYGISPSPDHFAC--MVDLLSRSGHLGDAYELMKSMHEPHAGAWGAL 278
+D+G ++ Y + P D A M+ L R G + +A + M E + W +
Sbjct: 152 IDDG--RIDKARKLYDMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTM 209
Query: 279 LGACKLHGDSDLGEIVANQLFELEPQNA 306
+ + + D VA +LFE+ P+
Sbjct: 210 ITGYRQNNRVD----VARKLFEVMPEKT 233
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 272 bits (695), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 141/338 (41%), Positives = 214/338 (63%), Gaps = 4/338 (1%)
Query: 10 NAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVV 69
++ + K G L AR VFD M +++V + MI GY + GDM AA LF+ K+V
Sbjct: 121 TTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSMPRKNVT 180
Query: 70 AWSALISGYVQNGQPNQALKVFLEMES-KNVKPDEFILVSLMSATSQLGHLELAQWVDSY 128
+W+ +ISG+ QNG ++ALK+FL ME K+VKP+ +VS++ A + LG LE+ + ++ Y
Sbjct: 181 SWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRRLEGY 240
Query: 129 VSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEM-PKRDLVSYCSMIQGLSIHGCGE 187
++ +V A ++M +KCG +D A +LF+E+ +R+L S+ SMI L+ HG +
Sbjct: 241 ARENGF-FDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHGKHD 299
Query: 188 DAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACM 247
+A+ LF ML EG PD V F +L AC H G+V +G F+SM++ + ISP +H+ CM
Sbjct: 300 EALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKLEHYGCM 359
Query: 248 VDLLSRSGHLGDAYELMKSM-HEPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNA 306
+DLL R G L +AY+L+K+M +P A WG LLGAC HG+ ++ EI + LF+LEP N
Sbjct: 360 IDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEIAEIASEALFKLEPTNP 419
Query: 307 ANYILLSNIYAAAERWIDVSLVRSRMRERSVQKIPGCS 344
N +++SNIYAA E+W V +R M++ ++ K G S
Sbjct: 420 GNCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAAGYS 457
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 99/232 (42%), Gaps = 44/232 (18%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPE-------------------------- 34
MP++NV SW ++ GF ++G+ S A +F M +
Sbjct: 174 MPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEI 233
Query: 35 --------------KNVVSFTTMIDGYAKAGDMAAARFLFEQ-ATEKDVVAWSALISGYV 79
N+ I+ Y+K G + A+ LFE+ ++++ +W+++I
Sbjct: 234 GRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLA 293
Query: 80 QNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWV-DSYVSKSSIDLQQ 138
+G+ ++AL +F +M + KPD V L+ A G + Q + S I +
Sbjct: 294 THGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKL 353
Query: 139 DHVIAALLDMNAKCGNMDRALKLFKEMP-KRDLVSYCSMIQGLSIHGCGEDA 189
+H ++D+ + G + A L K MP K D V + +++ S HG E A
Sbjct: 354 EHY-GCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEIA 404
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/297 (20%), Positives = 132/297 (44%), Gaps = 44/297 (14%)
Query: 52 DMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKP---------- 101
++ AR LF+ ++ LI Y + QP++++ ++ + ++P
Sbjct: 31 NLVYARKLFDHHQNSCTFLYNKLIQAYYVHHQPHESIVLYNLLSFDGLRPSHHTFNFIFA 90
Query: 102 -------------------------DEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDL 136
D F +L++A ++LG L A+ V +SK +
Sbjct: 91 ASASFSSARPLRLLHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVP- 149
Query: 137 QQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSM 196
V A++ + G+M A++LF MP++++ S+ ++I G S +G +A+++F M
Sbjct: 150 ----VWNAMITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCM 205
Query: 197 LMEGLV-PDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSG 255
+ V P+ + +L AC++ G ++ G + ++ G + +++ S+ G
Sbjct: 206 EKDKSVKPNHITVVSVLPACANLGELEIG-RRLEGYARENGFFDNIYVCNATIEMYSKCG 264
Query: 256 HLGDAYELMKSM-HEPHAGAWGALLGACKLHGDSDLG-EIVANQLFELEPQNAANYI 310
+ A L + + ++ + +W +++G+ HG D + A L E E +A ++
Sbjct: 265 MIDVAKRLFEELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFV 321
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 271 bits (694), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 139/341 (40%), Positives = 208/341 (60%), Gaps = 3/341 (0%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLF 60
M Q N+ +WNA++ + D++ AR +FD M +N S+ M+ GY KAG++ +A+ +F
Sbjct: 167 MHQPNLVAWNAVITACFRGNDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIF 226
Query: 61 EQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLE 120
+ +D V+WS +I G NG N++ F E++ + P+E L ++SA SQ G E
Sbjct: 227 SEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFE 286
Query: 121 LAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEM-PKRDLVSYCSMIQG 179
+ + +V K+ V AL+DM ++CGN+ A +F+ M KR +VS+ SMI G
Sbjct: 287 FGKILHGFVEKAGYSWIVS-VNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAG 345
Query: 180 LSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISP 239
L++HG GE+AVRLFN M G+ PD ++F +L ACSH+GL++EG +YF MK+ Y I P
Sbjct: 346 LAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEP 405
Query: 240 SPDHFACMVDLLSRSGHLGDAYELMKSMH-EPHAGAWGALLGACKLHGDSDLGEIVANQL 298
+H+ CMVDL RSG L AY+ + M P A W LLGAC HG+ +L E V +L
Sbjct: 406 EIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRL 465
Query: 299 FELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQK 339
EL+P N+ + +LLSN YA A +W DV+ +R M + ++K
Sbjct: 466 NELDPNNSGDLVLLSNAYATAGKWKDVASIRKSMIVQRIKK 506
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/318 (22%), Positives = 135/318 (42%), Gaps = 35/318 (11%)
Query: 14 CGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSA 73
C L AR + PE + F T++ GY+++ + + +F + K V +
Sbjct: 47 CAISISDALPYARRLLLCFPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDS 106
Query: 74 LISGYVQNGQPN-QALKVFLEMESKNVK----PDEFILVSLMSATSQLGHLELAQWVDSY 128
+V N ++L+ +M + +K F+ +L+ G +E A+ V
Sbjct: 107 FSFAFVIKAVENFRSLRTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDE 166
Query: 129 VSKSSIDLQQDHVIAALLDMN---------------------------AKCGNMDRALKL 161
+ + ++ + + VI A N K G ++ A ++
Sbjct: 167 MHQPNL-VAWNAVITACFRGNDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRI 225
Query: 162 FKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLV 221
F EMP RD VS+ +MI G++ +G ++ F + G+ P+EV+ T +L+ACS SG
Sbjct: 226 FSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSF 285
Query: 222 DEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHA-GAWGALLG 280
+ G +K G S ++D+ SR G++ A + + M E +W +++
Sbjct: 286 EFG-KILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIA 344
Query: 281 ACKLHGDSDLGEIVANQL 298
+HG + + N++
Sbjct: 345 GLAMHGQGEEAVRLFNEM 362
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 269 bits (687), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 136/340 (40%), Positives = 212/340 (62%), Gaps = 6/340 (1%)
Query: 10 NAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVV 69
A++ + G + AR F M +N+ T M+ GY+K G + A+ +F+Q +KD+V
Sbjct: 251 TALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLV 310
Query: 70 AWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYV 129
W+ +IS YV++ P +AL+VF EM +KPD + S++SA + LG L+ A+WV S +
Sbjct: 311 CWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCI 370
Query: 130 SKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDA 189
+ ++ + + AL++M AKCG +D +F++MP+R++VS+ SMI LS+HG DA
Sbjct: 371 HVNGLE-SELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDA 429
Query: 190 VRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVD 249
+ LF M E + P+EV F +L CSHSGLV+EG F SM +Y I+P +H+ CMVD
Sbjct: 430 LSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVD 489
Query: 250 LLSRSGHLGDAYELMKSMHEPHAG---AWGALLGACKLHGDSDLGEIVANQLFELEPQNA 306
L R+ L +A E+++SM P A WG+L+ AC++HG+ +LG+ A ++ ELEP +
Sbjct: 490 LFGRANLLREALEVIESM--PVASNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHD 547
Query: 307 ANYILLSNIYAAAERWIDVSLVRSRMRERSVQKIPGCSKL 346
+L+SNIYA +RW DV +R M E++V K G S++
Sbjct: 548 GALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRI 587
Score = 118 bits (296), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 138/279 (49%), Gaps = 33/279 (11%)
Query: 41 TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVK 100
T +D YA G + AR +F++ + +DVV W+ +I Y + G ++A K+F EM+ NV
Sbjct: 150 TGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVM 209
Query: 101 PDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNA---------- 150
PDE IL +++SA + G++ + + ++ ++ + + H++ AL+ M A
Sbjct: 210 PDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDT-HLLTALVTMYAGAGCMDMARE 268
Query: 151 ---------------------KCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDA 189
KCG +D A +F + K+DLV + +MI ++A
Sbjct: 269 FFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEA 328
Query: 190 VRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVD 249
+R+F M G+ PD V+ +++AC++ G++D+ + S G+ +++
Sbjct: 329 LRVFEEMCCSGIKPDVVSMFSVISACANLGILDKA-KWVHSCIHVNGLESELSINNALIN 387
Query: 250 LLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHGDS 288
+ ++ G L ++ + M + +W +++ A +HG++
Sbjct: 388 MYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEA 426
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 72/151 (47%), Gaps = 1/151 (0%)
Query: 69 VAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSY 128
+ ++ + ++ +P + + + + D+F + ++ A S++ L +
Sbjct: 77 IVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHGV 136
Query: 129 VSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGED 188
K + L V +DM A CG ++ A +F EM RD+V++ +MI+ G ++
Sbjct: 137 AFKIAT-LCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDE 195
Query: 189 AVRLFNSMLMEGLVPDEVAFTIILTACSHSG 219
A +LF M ++PDE+ I++AC +G
Sbjct: 196 AFKLFEEMKDSNVMPDEMILCNIVSACGRTG 226
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 268 bits (686), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 133/348 (38%), Positives = 218/348 (62%), Gaps = 3/348 (0%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLF 60
MP+R+ +W M+ + + D+ SA + + M EKN + +I+GY G++ A LF
Sbjct: 930 MPERDDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEATSNCLINGYMGLGNLEQAESLF 989
Query: 61 EQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLE 120
Q KD+++W+ +I GY QN + +A+ VF +M + + PDE + +++SA + LG LE
Sbjct: 990 NQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLE 1049
Query: 121 LAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGL 180
+ + V Y ++ L ++ +AL+DM +KCG+++RAL +F +PK++L + S+I+GL
Sbjct: 1050 IGKEVHMYTLQNGFVLDV-YIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGL 1108
Query: 181 SIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPS 240
+ HG ++A+++F M ME + P+ V F + TAC+H+GLVDEG ++SM Y I +
Sbjct: 1109 AAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSN 1168
Query: 241 PDHFACMVDLLSRSGHLGDAYELMKSMH-EPHAGAWGALLGACKLHGDSDLGEIVANQLF 299
+H+ MV L S++G + +A EL+ +M EP+A WGALL C++H + + EI N+L
Sbjct: 1169 VEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLDGCRIHKNLVIAEIAFNKLM 1228
Query: 300 ELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQKI-PGCSKL 346
LEP N+ Y LL ++YA RW DV+ +R RMRE ++KI PG S +
Sbjct: 1229 VLEPMNSGYYFLLVSMYAEQNRWRDVAEIRGRMRELGIEKICPGTSSI 1276
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 128/284 (45%), Gaps = 60/284 (21%)
Query: 62 QATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSAT---SQLGH 118
Q E +V ++AL G+V P ++L++++ M +V P + SL+ A+ S+ G
Sbjct: 830 QMQEPNVFVYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKASSFASRFGE 889
Query: 119 -LELAQW--------------VDSYVSKSSI--------------DLQQDHVIAA---LL 146
L+ W +D Y + I D+ +++A +L
Sbjct: 890 SLQAHIWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPERDDIAWTTMVSAYRRVL 949
Query: 147 DMN----------------AKC--------GNMDRALKLFKEMPKRDLVSYCSMIQGLSI 182
DM+ + C GN+++A LF +MP +D++S+ +MI+G S
Sbjct: 950 DMDSANSLANQMSEKNEATSNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQ 1009
Query: 183 HGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPD 242
+ +A+ +F M+ EG++PDEV + +++AC+H G+++ G Q G
Sbjct: 1010 NKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQN-GFVLDVY 1068
Query: 243 HFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHG 286
+ +VD+ S+ G L A + ++ + + W +++ HG
Sbjct: 1069 IGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHG 1112
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 267 bits (682), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 139/343 (40%), Positives = 209/343 (60%), Gaps = 6/343 (1%)
Query: 7 ASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEK 66
+W++M G+ K G + A +FD MP K+ V++ MI G K +M +AR LF++ TEK
Sbjct: 179 VAWSSMTSGYAKRGKIDEAMRLFDEMPYKDQVAWNVMITGCLKCKEMDSARELFDRFTEK 238
Query: 67 DVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVD 126
DVV W+A+ISGYV G P +AL +F EM PD ++SL+SA + LG LE + +
Sbjct: 239 DVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLH 298
Query: 127 SYV----SKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSI 182
Y+ S SS + AL+DM AKCG++DRA+++F+ + RDL ++ ++I GL++
Sbjct: 299 IYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLAL 358
Query: 183 HGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPD 242
H E ++ +F M + P+EV F ++ ACSHSG VDEG YF M+ Y I P+
Sbjct: 359 HH-AEGSIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIK 417
Query: 243 HFACMVDLLSRSGHLGDAYELMKSMH-EPHAGAWGALLGACKLHGDSDLGEIVANQLFEL 301
H+ CMVD+L R+G L +A+ ++SM EP+A W LLGACK++G+ +LG+ +L +
Sbjct: 418 HYGCMVDMLGRAGQLEEAFMFVESMKIEPNAIVWRTLLGACKIYGNVELGKYANEKLLSM 477
Query: 302 EPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQKIPGCS 344
+ +Y+LLSNIYA+ +W V VR + V+K G S
Sbjct: 478 RKDESGDYVLLSNIYASTGQWDGVQKVRKMFDDTRVKKPTGVS 520
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 123/264 (46%), Gaps = 14/264 (5%)
Query: 51 GDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLM 110
G + A LF++ + DV + ++ G Q+ +P + + ++ EME + V PD + ++
Sbjct: 60 GALKYAHKLFDEIPKPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVL 119
Query: 111 SATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDL 170
A S+L V + L + +V AL+ +A CG++ A +LF + K
Sbjct: 120 KACSKLEWRSNGFAFHGKVVRHGFVLNE-YVKNALILFHANCGDLGIASELFDDSAKAHK 178
Query: 171 VSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQS 230
V++ SM G + G ++A+RLF+ M + D+VA+ +++T C +D F
Sbjct: 179 VAWSSMTSGYAKRGKIDEAMRLFDEMPYK----DQVAWNVMITGCLKCKEMDSARELFDR 234
Query: 231 MKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHE----PHAGAWGALLGACKLHG 286
+K ++ + M+ G+ +A + K M + P +LL AC + G
Sbjct: 235 FTEKDVVT-----WNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLG 289
Query: 287 DSDLGEIVANQLFELEPQNAANYI 310
D + G+ + + E +++ Y+
Sbjct: 290 DLETGKRLHIYILETASVSSSIYV 313
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 109/242 (45%), Gaps = 31/242 (12%)
Query: 3 QRNVASWNAMLCGFVKDGDLSSARGVF----DAMPEKNVVSFTTMIDGYAKAGDMAAAR- 57
+++V +WNAM+ G+V G A G+F DA +VV+ +++ A GD+ +
Sbjct: 237 EKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKR 296
Query: 58 ---FLFEQATEKDVV-----AWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSL 109
++ E A+ + W+ALI Y + G ++A++VF ++ +++ ++V L
Sbjct: 297 LHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGL 356
Query: 110 MSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRD 169
L H E + + + + + + I +L + G +D K F M RD
Sbjct: 357 -----ALHHAEGSIEMFEEMQRLKVWPNEVTFIGVILAC-SHSGRVDEGRKYFSLM--RD 408
Query: 170 LVS-------YCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVD 222
+ + Y M+ L G E+A SM +E P+ + + +L AC G V+
Sbjct: 409 MYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESMKIE---PNAIVWRTLLGACKIYGNVE 465
Query: 223 EG 224
G
Sbjct: 466 LG 467
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 266 bits (679), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 139/385 (36%), Positives = 216/385 (56%), Gaps = 42/385 (10%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEK----NVVSFTT-------------- 42
M R+V S+ +M+ G+ ++G A +F+ M E+ +V + T
Sbjct: 357 MSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEG 416
Query: 43 ---------------------MIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQN 81
++D YAK G M A +F + KD+++W+ +I GY +N
Sbjct: 417 KRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKN 476
Query: 82 GQPNQALKVF-LEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDH 140
N+AL +F L +E K PDE + ++ A + L + + + Y+ ++ H
Sbjct: 477 CYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGY-FSDRH 535
Query: 141 VIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEG 200
V +L+DM AKCG + A LF ++ +DLVS+ MI G +HG G++A+ LFN M G
Sbjct: 536 VANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAG 595
Query: 201 LVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDA 260
+ DE++F +L ACSHSGLVDEGW +F M+ + I P+ +H+AC+VD+L+R+G L A
Sbjct: 596 IEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKA 655
Query: 261 YELMKSMH-EPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAA 319
Y +++M P A WGALL C++H D L E VA ++FELEP+N Y+L++NIYA A
Sbjct: 656 YRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEA 715
Query: 320 ERWIDVSLVRSRMRERSVQKIPGCS 344
E+W V +R R+ +R ++K PGCS
Sbjct: 716 EKWEQVKRLRKRIGQRGLRKNPGCS 740
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 77/250 (30%), Positives = 134/250 (53%), Gaps = 7/250 (2%)
Query: 34 EKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLE 93
E+N V +++ Y K + +AR +F++ TE+DV++W+++I+GYV NG + L VF++
Sbjct: 228 ERNSVG-NSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQ 286
Query: 94 MESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCG 153
M ++ D +VS+ + + + L + V S K+ ++D LLDM +KCG
Sbjct: 287 MLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFS-REDRFCNTLLDMYSKCG 345
Query: 154 NMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILT 213
++D A +F+EM R +VSY SMI G + G +AV+LF M EG+ PD T +L
Sbjct: 346 DLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLN 405
Query: 214 ACSHSGLVDEGWNYFQSMKQKYGISPSPDHFA--CMVDLLSRSGHLGDAYELMKSMHEPH 271
C+ L+DEG + +K+ D F ++D+ ++ G + +A + M
Sbjct: 406 CCARYRLLDEGKRVHEWIKEN---DLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKD 462
Query: 272 AGAWGALLGA 281
+W ++G
Sbjct: 463 IISWNTIIGG 472
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/329 (26%), Positives = 166/329 (50%), Gaps = 48/329 (14%)
Query: 1 MPQRNVASWNAMLCGFVKDG-------------------DLSSARGVFDAMPEKNVVSF- 40
M +R+V SWN+++ G+V +G DL++ VF + ++S
Sbjct: 256 MTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLG 315
Query: 41 -------------------TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQN 81
T++D Y+K GD+ +A+ +F + +++ VV+++++I+GY +
Sbjct: 316 RAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYARE 375
Query: 82 GQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHV 141
G +A+K+F EME + + PD + + ++++ ++ L+ + V ++ ++ DL D
Sbjct: 376 GLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKEN--DLGFDIF 433
Query: 142 IA-ALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEG 200
++ AL+DM AKCG+M A +F EM +D++S+ ++I G S + +A+ LFN +L E
Sbjct: 434 VSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEK 493
Query: 201 -LVPDEVAFTIILTACSHSGLVDEGWN-YFQSMKQKYGISPSPDHFA-CMVDLLSRSGHL 257
PDE +L AC+ D+G + M+ Y S H A +VD+ ++ G L
Sbjct: 494 RFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGY---FSDRHVANSLVDMYAKCGAL 550
Query: 258 GDAYELMKSMHEPHAGAWGALLGACKLHG 286
A+ L + +W ++ +HG
Sbjct: 551 LLAHMLFDDIASKDLVSWTVMIAGYGMHG 579
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 119/254 (46%), Gaps = 6/254 (2%)
Query: 47 YAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFIL 106
Y GD+ A +F++ + + W+ L++ ++G + ++ +F +M S V+ D +
Sbjct: 139 YTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTF 198
Query: 107 VSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMP 166
+ + S L + + + ++ KS +++ V +L+ K +D A K+F EM
Sbjct: 199 SCVSKSFSSLRSVHGGEQLHGFILKSGFG-ERNSVGNSLVAFYLKNQRVDSARKVFDEMT 257
Query: 167 KRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWN 226
+RD++S+ S+I G +G E + +F ML+ G+ D + C+ S L+ G
Sbjct: 258 ERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLG-R 316
Query: 227 YFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHG 286
S+ K S ++D+ S+ G L A + + M + ++ +++ G
Sbjct: 317 AVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREG 376
Query: 287 DSDLGEIVANQLFE 300
+ GE V +LFE
Sbjct: 377 LA--GEAV--KLFE 386
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 265 bits (676), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 132/342 (38%), Positives = 221/342 (64%), Gaps = 7/342 (2%)
Query: 10 NAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVV 69
NA++ F K G L AR VFD+M +KNV +T+M+ GY G + AR LFE++ KDVV
Sbjct: 186 NALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVV 245
Query: 70 AWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYV 129
W+A+++GYVQ + ++AL++F M++ ++PD F+LVSL++ +Q G LE +W+ Y+
Sbjct: 246 LWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYI 305
Query: 130 SKSSIDLQQDHVI-AALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGED 188
+++ + + D V+ AL+DM AKCG ++ AL++F E+ +RD S+ S+I GL+++G
Sbjct: 306 NENRVTV--DKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGR 363
Query: 189 AVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMV 248
A+ L+ M G+ D + F +LTAC+H G V EG F SM +++ + P +H +C++
Sbjct: 364 ALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLI 423
Query: 249 DLLSRSGHLGDAYELMKSMH----EPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQ 304
DLL R+G L +A EL+ M E + +LL A + +G+ + E VA +L ++E
Sbjct: 424 DLLCRAGLLDEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIAERVAEKLEKVEVS 483
Query: 305 NAANYILLSNIYAAAERWIDVSLVRSRMRERSVQKIPGCSKL 346
+++ + LL+++YA+A RW DV+ VR +M++ ++K PGCS +
Sbjct: 484 DSSAHTLLASVYASANRWEDVTNVRRKMKDLGIRKFPGCSSI 525
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 128/272 (47%), Gaps = 31/272 (11%)
Query: 47 YAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEM-ESKNVKPDEFI 105
YA G + +F++ ++DVV+W+ LIS YV NG+ A+ VF M + N+K DE
Sbjct: 91 YASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNLKFDEGT 150
Query: 106 LVSLMSATSQLGHLELAQWVDSYV----------SKSSIDL--------QQDHVIAALLD 147
+VS +SA S L +LE+ + + +V + +D+ + V ++ D
Sbjct: 151 IVSTLSACSALKNLEIGERIYRFVVTEFEMSVRIGNALVDMFCKCGCLDKARAVFDSMRD 210
Query: 148 MNAKC-----------GNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSM 196
N KC G +D A LF+ P +D+V + +M+ G ++A+ LF M
Sbjct: 211 KNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCM 270
Query: 197 LMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGH 256
G+ PD +LT C+ +G +++G + + ++ +VD+ ++ G
Sbjct: 271 QTAGIRPDNFVLVSLLTGCAQTGALEQG-KWIHGYINENRVTVDKVVGTALVDMYAKCGC 329
Query: 257 LGDAYELMKSMHEPHAGAWGALLGACKLHGDS 288
+ A E+ + E +W +L+ ++G S
Sbjct: 330 IETALEVFYEIKERDTASWTSLIYGLAMNGMS 361
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 111/240 (46%), Gaps = 9/240 (3%)
Query: 85 NQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAA 144
+ L +F E+ + + PD F L ++ + +L + + V Y K+ ++ +V +
Sbjct: 28 TKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHGYAVKAGLEFDS-YVSNS 86
Query: 145 LLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLME-GLVP 203
L+ M A G ++ K+F EMP+RD+VS+ +I +G EDA+ +F M E L
Sbjct: 87 LMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNLKF 146
Query: 204 DEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYEL 263
DE L+ACS ++ G ++ + ++ +S + +VD+ + G L A +
Sbjct: 147 DEGTIVSTLSACSALKNLEIGERIYRFVVTEFEMSVRIGN--ALVDMFCKCGCLDKARAV 204
Query: 264 MKSMHEPHAGAWGALLGACKLHGDSDLGEIVANQLFELEP-QNAANYILLSNIYAAAERW 322
SM + + W +++ G D + LFE P ++ + + N Y R+
Sbjct: 205 FDSMRDKNVKCWTSMVFGYVSTGRIDEARV----LFERSPVKDVVLWTAMMNGYVQFNRF 260
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 263 bits (673), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 132/341 (38%), Positives = 211/341 (61%), Gaps = 3/341 (0%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLF 60
MP R+ SWN++L +++ G + AR +FD M E+NV S+ MI GYA AG + A+ +F
Sbjct: 201 MPVRDAVSWNSLLSAYLEKGLVDEARALFDEMEERNVESWNFMISGYAAAGLVKEAKEVF 260
Query: 61 EQATEKDVVAWSALISGYVQNGQPNQALKVFLEM-ESKNVKPDEFILVSLMSATSQLGHL 119
+ +DVV+W+A+++ Y G N+ L+VF +M + KPD F LVS++SA + LG L
Sbjct: 261 DSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSL 320
Query: 120 ELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQG 179
+WV Y+ K I+++ + AL+DM +KCG +D+AL++F+ KRD+ ++ S+I
Sbjct: 321 SQGEWVHVYIDKHGIEIE-GFLATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISD 379
Query: 180 LSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISP 239
LS+HG G+DA+ +F+ M+ EG P+ + F +L+AC+H G++D+ F+ M Y + P
Sbjct: 380 LSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEP 439
Query: 240 SPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGA-WGALLGACKLHGDSDLGEIVANQL 298
+ +H+ CMVDLL R G + +A EL+ + A +LLGACK G + E +AN+L
Sbjct: 440 TIEHYGCMVDLLGRMGKIEEAEELVNEIPADEASILLESLLGACKRFGQLEQAERIANRL 499
Query: 299 FELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQK 339
EL ++++ Y +SN+YA+ RW V R MR V +
Sbjct: 500 LELNLRDSSGYAQMSNLYASDGRWEKVIDGRRNMRAERVNR 540
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 96/216 (44%), Gaps = 8/216 (3%)
Query: 107 VSLMSATSQLGHLELAQWVDSYVSKSSI--DLQQDHVIAALLDMNAKCGNMDRALKLFKE 164
V ++S T + L Q +++ K+ + D + A N + + A +
Sbjct: 40 VPILSFTERAKSLTEIQQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILNR 99
Query: 165 MPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEG 224
+ + ++ S+I+ + E A+ +F ML+ + PD+ +FT +L AC+ +EG
Sbjct: 100 IGSPNGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEG 159
Query: 225 WNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKL 284
+ K G+ +V++ RSG+ A +++ M A +W +LL A
Sbjct: 160 -RQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLE 218
Query: 285 HGDSDLGEIVANQLF-ELEPQNAANYILLSNIYAAA 319
G D A LF E+E +N ++ + + YAAA
Sbjct: 219 KGLVD----EARALFDEMEERNVESWNFMISGYAAA 250
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 262 bits (669), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 143/385 (37%), Positives = 221/385 (57%), Gaps = 44/385 (11%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVV-----------SFTTMID---- 45
+P+R + SW A++ + ++G+ A +F M + +V +FT + D
Sbjct: 182 LPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQG 241
Query: 46 ------------------------GYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQN 81
YAK G +A A+ LF++ +++ W+A+ISGY +N
Sbjct: 242 RSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKN 301
Query: 82 GQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHV 141
G +A+ +F EM +K+V+PD + S +SA +Q+G LE A+ + YV +S D + D
Sbjct: 302 GYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRS--DYRDDVF 359
Query: 142 IA-ALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEG 200
I+ AL+DM AKCG+++ A +F RD+V + +MI G +HG +A+ L+ +M G
Sbjct: 360 ISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGG 419
Query: 201 LVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDA 260
+ P++V F +L AC+HSG+V EGW +F M + I+P H+AC++DLL R+GHL A
Sbjct: 420 VHPNDVTFLGLLMACNHSGMVREGWWFFNRMAD-HKINPQQQHYACVIDLLGRAGHLDQA 478
Query: 261 YELMKSMH-EPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAA 319
YE++K M +P WGALL ACK H +LGE A QLF ++P N +Y+ LSN+YAAA
Sbjct: 479 YEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAA 538
Query: 320 ERWIDVSLVRSRMRERSVQKIPGCS 344
W V+ VR RM+E+ + K GCS
Sbjct: 539 RLWDRVAEVRVRMKEKGLNKDVGCS 563
Score = 121 bits (304), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 76/264 (28%), Positives = 144/264 (54%), Gaps = 10/264 (3%)
Query: 28 VFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFE--QATEKDVVAWSALISGYVQNGQPN 85
VF + +V +I YAK + +AR +FE E+ +V+W+A++S Y QNG+P
Sbjct: 145 VFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPM 204
Query: 86 QALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAAL 145
+AL++F +M +VKPD LVS+++A + L L+ + + + V K ++++ D +I +L
Sbjct: 205 EALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLI-SL 263
Query: 146 LDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDE 205
M AKCG + A LF +M +L+ + +MI G + +G +A+ +F+ M+ + + PD
Sbjct: 264 NTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDT 323
Query: 206 VAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHF---ACMVDLLSRSGHLGDAYE 262
++ T ++AC+ G +++ +SM + G S D + ++D+ ++ G + A
Sbjct: 324 ISITSAISACAQVGSLEQA----RSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARL 379
Query: 263 LMKSMHEPHAGAWGALLGACKLHG 286
+ + W A++ LHG
Sbjct: 380 VFDRTLDRDVVVWSAMIVGYGLHG 403
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 118/249 (47%), Gaps = 4/249 (1%)
Query: 40 FTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNV 99
T +I + GD+ AR +F+ + W+A+I GY +N AL ++ M+ V
Sbjct: 56 ITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARV 115
Query: 100 KPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRAL 159
PD F L+ A S L HL++ ++V + V + D V L+ + AKC + A
Sbjct: 116 SPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADV-FVQNGLIALYAKCRRLGSAR 174
Query: 160 KLFK--EMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSH 217
+F+ +P+R +VS+ +++ + +G +A+ +F+ M + PD VA +L A +
Sbjct: 175 TVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTC 234
Query: 218 SGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGA 277
+ +G + S+ K G+ PD + + ++ G + A L M P+ W A
Sbjct: 235 LQDLKQGRSIHASVV-KMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNA 293
Query: 278 LLGACKLHG 286
++ +G
Sbjct: 294 MISGYAKNG 302
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 262 bits (669), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 127/326 (38%), Positives = 208/326 (63%), Gaps = 2/326 (0%)
Query: 20 GDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYV 79
G L S VF+++P + V T M+ A+ GD+ AR LFE E+D +AW+A+ISGY
Sbjct: 157 GCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYA 216
Query: 80 QNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQD 139
Q G+ +AL VF M+ + VK + ++S++SA +QLG L+ +W SY+ ++ I +
Sbjct: 217 QVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITV- 275
Query: 140 HVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLME 199
+ L+D+ AKCG+M++A+++F M ++++ ++ S + GL+++G GE + LF+ M +
Sbjct: 276 RLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQD 335
Query: 200 GLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGD 259
G+ P+ V F +L CS G VDEG +F SM+ ++GI P +H+ C+VDL +R+G L D
Sbjct: 336 GVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLED 395
Query: 260 AYELMKSM-HEPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAA 318
A +++ M +PHA W +LL A +++ + +LG + + ++ ELE N Y+LLSNIYA
Sbjct: 396 AVSIIQQMPMKPHAAVWSSLLHASRMYKNLELGVLASKKMLELETANHGAYVLLSNIYAD 455
Query: 319 AERWIDVSLVRSRMRERSVQKIPGCS 344
+ W +VS VR M+ + V+K PGCS
Sbjct: 456 SNDWDNVSHVRQSMKSKGVRKQPGCS 481
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 261 bits (666), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 137/345 (39%), Positives = 207/345 (60%), Gaps = 2/345 (0%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLF 60
M ++ SWN+++ G V+ +S A +F+ MP K++VS+T MI G++ G+++ LF
Sbjct: 336 MKNKDSVSWNSLITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELF 395
Query: 61 EQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLE 120
EKD + W+A+IS +V NG +AL F +M K V P+ + S++SAT+ L L
Sbjct: 396 GMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLI 455
Query: 121 LAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGL 180
+ V K +I + V +L+ M KCGN + A K+F + + ++VSY +MI G
Sbjct: 456 EGLQIHGRVVKMNI-VNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGY 514
Query: 181 SIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPS 240
S +G G+ A++LF+ + G P+ V F +L+AC H G VD GW YF+SMK Y I P
Sbjct: 515 SYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPG 574
Query: 241 PDHFACMVDLLSRSGHLGDAYELMKSMH-EPHAGAWGALLGACKLHGDSDLGEIVANQLF 299
PDH+ACMVDLL RSG L DA L+ +M +PH+G WG+LL A K H DL E+ A +L
Sbjct: 575 PDHYACMVDLLGRSGLLDDASNLISTMPCKPHSGVWGSLLSASKTHLRVDLAELAAKKLI 634
Query: 300 ELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQKIPGCS 344
ELEP +A Y++LS +Y+ + D + + + + ++K PG S
Sbjct: 635 ELEPDSATPYVVLSQLYSIIGKNRDCDRIMNIKKSKRIKKDPGSS 679
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 92/355 (25%), Positives = 154/355 (43%), Gaps = 83/355 (23%)
Query: 4 RNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQA 63
R+ + N +L G+++ G + A VF M K VVS ++M+ GY K G + AR LF++
Sbjct: 175 RDSVASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRM 234
Query: 64 TEKDVVAWSALISGYVQNGQPNQALKVFLEMESK-NVK---------------------- 100
TE++V+ W+A+I GY + G +FL M + +VK
Sbjct: 235 TERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREG 294
Query: 101 ----------PDEFILV---SLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLD 147
P EF L SLMS S+LG++ A+ V V K+ + + +I L+
Sbjct: 295 SQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFG-VMKNKDSVSWNSLITGLVQ 353
Query: 148 MNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVP--DE 205
+ A +LF++MP +D+VS+ MI+G S G V LF G++P D
Sbjct: 354 RK----QISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELF------GMMPEKDN 403
Query: 206 VAFTIILTACSHSGLVDEGWNYFQSMKQK------YGISPSPDHFACMVDLLS------- 252
+ +T +++A +G +E +F M QK Y S A + DL+
Sbjct: 404 ITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGR 463
Query: 253 ---------------------RSGHLGDAYELMKSMHEPHAGAWGALLGACKLHG 286
+ G+ DAY++ + EP+ ++ ++ +G
Sbjct: 464 VVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNG 518
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 144/311 (46%), Gaps = 26/311 (8%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAG-DMAAARFL 59
M R++ SW AM+ + ++G +S A VFD MP + S+ MI K D+ A L
Sbjct: 76 MSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPVRVTTSYNAMITAMIKNKCDLGKAYEL 135
Query: 60 FEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHL 119
F EK+ V+++ +I+G+V+ G+ ++A ++ E P +F S+ S G+L
Sbjct: 136 FCDIPEKNAVSYATMITGFVRAGRFDEAEFLYAE------TPVKF-RDSVASNVLLSGYL 188
Query: 120 ELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQG 179
+W ++ + +++ ++++ K G + A LF M +R+++++ +MI G
Sbjct: 189 RAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDG 248
Query: 180 LSIHGCGEDAVRLFNSMLMEGLVP-DEVAFTIILTACSHSGLVDEGWNYFQSMKQKYG-I 237
G ED LF M EG V + ++ AC EG Q +G +
Sbjct: 249 YFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREG-------SQIHGLV 301
Query: 238 SPSPDHF-----ACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHGDSDLGE 292
S P F ++ + S+ G++G+A + M + +W +L+ L + E
Sbjct: 302 SRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITG--LVQRKQISE 359
Query: 293 IVANQLFELEP 303
A +LFE P
Sbjct: 360 --AYELFEKMP 368
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/239 (21%), Positives = 116/239 (48%), Gaps = 12/239 (5%)
Query: 10 NAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVV 69
N+ + ++G+L A +F M +++VS+ MI YA+ G M+ A +F++ +
Sbjct: 54 NSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPVRVTT 113
Query: 70 AWSALISGYVQNG-QPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSY 128
+++A+I+ ++N +A ++F ++ KN ++ + A G + A+++
Sbjct: 114 SYNAMITAMIKNKCDLGKAYELFCDIPEKNAVSYATMITGFVRA----GRFDEAEFL--- 166
Query: 129 VSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGED 188
+++ + + LL + G + A+++F+ M +++VS SM+ G G D
Sbjct: 167 YAETPVKFRDSVASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVD 226
Query: 189 AVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACM 247
A LF+ M + + +T ++ +G ++G+ F M+Q+ + + + A M
Sbjct: 227 ARSLFDRMTERNV----ITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVM 281
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 260 bits (664), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 133/330 (40%), Positives = 217/330 (65%), Gaps = 4/330 (1%)
Query: 20 GDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQAT--EKDVVAWSALISG 77
G L AR +FD M K+V + ++ GY K G+M AR L E ++ V+W+ +ISG
Sbjct: 165 GGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISG 224
Query: 78 YVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQ 137
Y ++G+ ++A++VF M +NV+PDE L++++SA + LG LEL + + SYV ++ +
Sbjct: 225 YAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMN-R 283
Query: 138 QDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSML 197
+ A++DM AK GN+ +AL +F+ + +R++V++ ++I GL+ HG G +A+ +FN M+
Sbjct: 284 AVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMV 343
Query: 198 MEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHL 257
G+ P++V F IL+ACSH G VD G F SM+ KYGI P+ +H+ CM+DLL R+G L
Sbjct: 344 KAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKL 403
Query: 258 GDAYELMKSM-HEPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIY 316
+A E++KSM + +A WG+LL A +H D +LGE ++L +LEP N+ NY+LL+N+Y
Sbjct: 404 READEVIKSMPFKANAAIWGSLLAASNVHHDLELGERALSELIKLEPNNSGNYMLLANLY 463
Query: 317 AAAERWIDVSLVRSRMRERSVQKIPGCSKL 346
+ RW + ++R+ M+ V+K+ G S +
Sbjct: 464 SNLGRWDESRMMRNMMKGIGVKKMAGESSI 493
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/287 (20%), Positives = 118/287 (41%), Gaps = 41/287 (14%)
Query: 36 NVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQ---ALKVFL 92
NV F I+ + AG + A +F + + +I +PN A+ V+
Sbjct: 49 NVAKF---IEACSNAGHLRYAYSVFTHQPCPNTYLHNTMIRALSLLDEPNAHSIAITVYR 105
Query: 93 EMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKC 152
++ + KPD F ++ ++ + + + V D HV+ L+ M C
Sbjct: 106 KLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFD-SSVHVVTGLIQMYFSC 164
Query: 153 GNMDRALKLFKEMPKRDL---------------------------------VSYCSMIQG 179
G + A K+F EM +D+ VS+ +I G
Sbjct: 165 GGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISG 224
Query: 180 LSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISP 239
+ G +A+ +F MLME + PDEV +L+AC+ G ++ G + + G++
Sbjct: 225 YAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHR-GMNR 283
Query: 240 SPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHG 286
+ ++D+ ++SG++ A ++ + ++E + W ++ HG
Sbjct: 284 AVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHG 330
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 259 bits (661), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 127/305 (41%), Positives = 186/305 (60%), Gaps = 2/305 (0%)
Query: 43 MIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPD 102
++ YA G + AR LFE+ E D+ W+ L++ Y + + + +V L V+P+
Sbjct: 156 LVGFYANCGKLREARSLFERIREPDLATWNTLLAAYANSEEIDSDEEVLLLFMRMQVRPN 215
Query: 103 EFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLF 162
E LV+L+ + + LG W YV K+++ L Q V +L+D+ +KCG + A K+F
Sbjct: 216 ELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQ-FVGTSLIDLYSKCGCLSFARKVF 274
Query: 163 KEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVD 222
EM +RD+ Y +MI+GL++HG G++ + L+ S++ +GLVPD F + ++ACSHSGLVD
Sbjct: 275 DEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTISACSHSGLVD 334
Query: 223 EGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMH-EPHAGAWGALLGA 281
EG F SMK YGI P +H+ C+VDLL RSG L +A E +K M +P+A W + LG+
Sbjct: 335 EGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEAEECIKKMPVKPNATLWRSFLGS 394
Query: 282 CKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQKIP 341
+ HGD + GEI L LE +N+ NY+LLSNIYA RW DV R M++ V K P
Sbjct: 395 SQTHGDFERGEIALKHLLGLEFENSGNYVLLSNIYAGVNRWTDVEKTRELMKDHRVNKSP 454
Query: 342 GCSKL 346
G S L
Sbjct: 455 GISTL 459
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 72/127 (56%), Gaps = 2/127 (1%)
Query: 41 TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVK 100
T++ID Y+K G ++ AR +F++ +++DV ++A+I G +G + ++++ + S+ +
Sbjct: 255 TSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLV 314
Query: 101 PDEFILVSLMSATSQLGHL-ELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRAL 159
PD V +SA S G + E Q +S + I+ + +H L+D+ + G ++ A
Sbjct: 315 PDSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHY-GCLVDLLGRSGRLEEAE 373
Query: 160 KLFKEMP 166
+ K+MP
Sbjct: 374 ECIKKMP 380
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 106/251 (42%), Gaps = 27/251 (10%)
Query: 53 MAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVF------LEMESKNVKPDEFIL 106
++ A + Q V ++ LIS V N Q F L S V+P+EF
Sbjct: 56 LSYALSILRQIPNPSVFLYNTLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTY 115
Query: 107 VSLMSATSQLGHLELAQW------VDSYVSKSSIDLQQDHVI-AALLDMNAKCGNMDRAL 159
SL A+ AQW + ++V K + D + AAL+ A CG + A
Sbjct: 116 PSLFKASGFD-----AQWHRHGRALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREAR 170
Query: 160 KLFKEMPKRDLVSYCSMIQGLSIH---GCGEDAVRLFNSMLMEGLVPDEVAFTIILTACS 216
LF+ + + DL ++ +++ + E+ + LF M + P+E++ ++ +C+
Sbjct: 171 SLFERIREPDLATWNTLLAAYANSEEIDSDEEVLLLFMRMQVR---PNELSLVALIKSCA 227
Query: 217 HSGLVDEG-WNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAW 275
+ G G W + +K ++ ++DL S+ G L A ++ M + +
Sbjct: 228 NLGEFVRGVWAHVYVLKNNLTLNQFVG--TSLIDLYSKCGCLSFARKVFDEMSQRDVSCY 285
Query: 276 GALLGACKLHG 286
A++ +HG
Sbjct: 286 NAMIRGLAVHG 296
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 258 bits (660), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 123/310 (39%), Positives = 193/310 (62%), Gaps = 1/310 (0%)
Query: 34 EKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLE 93
++++ + T I Y+K+ D +AR LF+ T + V+W+ +ISGY + G ++AL +F
Sbjct: 288 DQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHA 347
Query: 94 MESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCG 153
M KPD L+SL+S + G LE +W+D+ + AL+DM +KCG
Sbjct: 348 MIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCG 407
Query: 154 NMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILT 213
++ A +F P++ +V++ +MI G +++G +A++LF+ M+ P+ + F +L
Sbjct: 408 SIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQ 467
Query: 214 ACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMH-EPHA 272
AC+HSG +++GW YF MKQ Y ISP DH++CMVDLL R G L +A EL+++M +P A
Sbjct: 468 ACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDA 527
Query: 273 GAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWIDVSLVRSRM 332
G WGALL ACK+H + + E A LF LEPQ AA Y+ ++NIYAAA W + +RS M
Sbjct: 528 GIWGALLNACKIHRNVKIAEQAAESLFNLEPQMAAPYVEMANIYAAAGMWDGFARIRSIM 587
Query: 333 RERSVQKIPG 342
++R+++K PG
Sbjct: 588 KQRNIKKYPG 597
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 113/251 (45%), Gaps = 4/251 (1%)
Query: 41 TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVK 100
T +D + K + A +FE+ E+D W+A++SG+ Q+G ++A +F EM +
Sbjct: 91 TATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEIT 150
Query: 101 PDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALK 160
PD +++L+ + S L+L + + + + +D+Q V + KCG++D A
Sbjct: 151 PDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVT-VANTWISTYGKCGDLDSAKL 209
Query: 161 LFKEMPK--RDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHS 218
+F+ + + R +VS+ SM + S+ G DA L+ ML E PD F + +C +
Sbjct: 210 VFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNP 269
Query: 219 GLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGAL 278
+ +G S G + + + S+S A L M +W +
Sbjct: 270 ETLTQG-RLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVM 328
Query: 279 LGACKLHGDSD 289
+ GD D
Sbjct: 329 ISGYAEKGDMD 339
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 98/226 (43%), Gaps = 45/226 (19%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAM---------------------------- 32
M R SW M+ G+ + GD+ A +F AM
Sbjct: 317 MTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETG 376
Query: 33 ------------PEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQ 80
NV+ +ID Y+K G + AR +F+ EK VV W+ +I+GY
Sbjct: 377 KWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYAL 436
Query: 81 NGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQ-- 138
NG +ALK+F +M + KP+ ++++ A + G LE W ++ K ++
Sbjct: 437 NGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKG-WEYFHIMKQVYNISPGL 495
Query: 139 DHVIAALLDMNAKCGNMDRALKLFKEM-PKRDLVSYCSMIQGLSIH 183
DH + ++D+ + G ++ AL+L + M K D + +++ IH
Sbjct: 496 DHY-SCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNACKIH 540
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 77/160 (48%), Gaps = 1/160 (0%)
Query: 57 RFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQL 116
R L+ + V AW+ I V P ++L +F EM+ +P+ F + A ++L
Sbjct: 6 RRLYRISGLSSVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARL 65
Query: 117 GHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSM 176
+ + V +++ KS V A +DM KC ++D A K+F+ MP+RD ++ +M
Sbjct: 66 ADVGCCEMVHAHLIKSPF-WSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAM 124
Query: 177 IQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACS 216
+ G G + A LF M + + PD V ++ + S
Sbjct: 125 LSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSAS 164
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 257 bits (656), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 132/334 (39%), Positives = 214/334 (64%), Gaps = 11/334 (3%)
Query: 20 GDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYV 79
GDL SA+ VFD K++ ++ ++++ YAKAG + AR LF++ E++V++WS LI+GYV
Sbjct: 111 GDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYV 170
Query: 80 QNGQPNQALKVFLEMESKN-----VKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSI 134
G+ +AL +F EM+ V+P+EF + +++SA +LG LE +WV +Y+ K +
Sbjct: 171 MCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHV 230
Query: 135 DLQQDHVI-AALLDMNAKCGNMDRALKLFKEM-PKRDLVSYCSMIQGLSIHGCGEDAVRL 192
++ D V+ AL+DM AKCG+++RA ++F + K+D+ +Y +MI L+++G ++ +L
Sbjct: 231 EI--DIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQL 288
Query: 193 FNSMLM-EGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLL 251
F+ M + + P+ V F IL AC H GL++EG +YF+ M +++GI+PS H+ CMVDL
Sbjct: 289 FSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLY 348
Query: 252 SRSGHLGDAYELMKSM-HEPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYI 310
RSG + +A + SM EP WG+LL ++ GD E +L EL+P N+ Y+
Sbjct: 349 GRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGDIKTCEGALKRLIELDPMNSGAYV 408
Query: 311 LLSNIYAAAERWIDVSLVRSRMRERSVQKIPGCS 344
LLSN+YA RW++V +R M + + K+PGCS
Sbjct: 409 LLSNVYAKTGRWMEVKCIRHEMEVKGINKVPGCS 442
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 112/259 (43%), Gaps = 42/259 (16%)
Query: 71 WSALISGYVQN---GQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDS 127
W+ +I V N Q + + V+L M + V PD L+ + HL L Q +
Sbjct: 27 WNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRTHA 86
Query: 128 YVSKSSIDLQQDHVIAALLDMNAKCGNM-------------------------------D 156
+ +D + V +LL+M + CG++ D
Sbjct: 87 QILLFGLD-KDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLID 145
Query: 157 RALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLM----EGLV-PDEVAFTII 211
A KLF EMP+R+++S+ +I G + G ++A+ LF M + E V P+E + +
Sbjct: 146 DARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTV 205
Query: 212 LTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSM-HEP 270
L+AC G +++G + + KY + ++D+ ++ G L A + ++ +
Sbjct: 206 LSACGRLGALEQG-KWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKK 264
Query: 271 HAGAWGALLGACKLHGDSD 289
A+ A++ ++G +D
Sbjct: 265 DVKAYSAMICCLAMYGLTD 283
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 255 bits (651), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 124/343 (36%), Positives = 223/343 (65%), Gaps = 2/343 (0%)
Query: 3 QRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQ 62
Q +V N+++ + G +++A +F M ++VVS+T+M+ GY K G + AR +F++
Sbjct: 149 QNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMVENAREMFDE 208
Query: 63 ATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELA 122
+++ WS +I+GY +N +A+ +F M+ + V +E ++VS++S+ + LG LE
Sbjct: 209 MPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGALEFG 268
Query: 123 QWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSI 182
+ YV KS + + + AL+DM +CG++++A+ +F+ +P+ D +S+ S+I+GL++
Sbjct: 269 ERAYEYVVKSHMTVNLI-LGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAV 327
Query: 183 HGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPD 242
HG A+ F+ M+ G +P +V FT +L+ACSH GLV++G +++MK+ +GI P +
Sbjct: 328 HGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKKDHGIEPRLE 387
Query: 243 HFACMVDLLSRSGHLGDAYELMKSMH-EPHAGAWGALLGACKLHGDSDLGEIVANQLFEL 301
H+ C+VD+L R+G L +A + MH +P+A GALLGACK++ ++++ E V N L ++
Sbjct: 388 HYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYKNTEVAERVGNMLIKV 447
Query: 302 EPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQKIPGCS 344
+P+++ Y+LLSNIYA A +W + +R M+E+ V+K PG S
Sbjct: 448 KPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPGWS 490
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 254 bits (650), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 125/314 (39%), Positives = 197/314 (62%), Gaps = 2/314 (0%)
Query: 34 EKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLE 93
+ NV T+I+ Y + D+ +AR +F++ E VV ++A+I+GY + +PN+AL +F E
Sbjct: 161 DDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFRE 220
Query: 94 MESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCG 153
M+ K +KP+E L+S++S+ + LG L+L +W+ Y K S + V AL+DM AKCG
Sbjct: 221 MQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSF-CKYVKVNTALIDMFAKCG 279
Query: 154 NMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILT 213
++D A+ +F++M +D ++ +MI + HG E ++ +F M E + PDE+ F +L
Sbjct: 280 SLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLN 339
Query: 214 ACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMH-EPHA 272
ACSH+G V+EG YF M K+GI PS H+ MVDLLSR+G+L DAYE + + P
Sbjct: 340 ACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTP 399
Query: 273 GAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWIDVSLVRSRM 332
W LL AC H + DL E V+ ++FEL+ + +Y++LSN+YA ++W V +R M
Sbjct: 400 MLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLYARNKKWEYVDSLRKVM 459
Query: 333 RERSVQKIPGCSKL 346
++R K+PGCS +
Sbjct: 460 KDRKAVKVPGCSSI 473
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 115/237 (48%), Gaps = 2/237 (0%)
Query: 53 MAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSA 112
M+ AR LFE +E D+V ++++ GY + P + +F+E+ + PD + SL+ A
Sbjct: 79 MSYARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKA 138
Query: 113 TSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVS 172
+ LE + + K +D +V L++M +C ++D A +F + + +V
Sbjct: 139 CAVAKALEEGRQLHCLSMKLGLD-DNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVC 197
Query: 173 YCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMK 232
Y +MI G + +A+ LF M + L P+E+ +L++C+ G +D G +
Sbjct: 198 YNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLG-KWIHKYA 256
Query: 233 QKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHGDSD 289
+K+ ++D+ ++ G L DA + + M AW A++ A HG ++
Sbjct: 257 KKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAE 313
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 254 bits (648), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 121/303 (39%), Positives = 187/303 (61%), Gaps = 2/303 (0%)
Query: 41 TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVK 100
T + Y+K ++ +AR LF+++ EK + +W+A+ISGY QNG A+ +F EM+
Sbjct: 358 TALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFS 417
Query: 101 PDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALK 160
P+ + ++SA +QLG L L +WV V + + +V AL+ M AKCG++ A +
Sbjct: 418 PNPVTITCILSACAQLGALSLGKWVHDLVRSTDFE-SSIYVSTALIGMYAKCGSIAEARR 476
Query: 161 LFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGL 220
LF M K++ V++ +MI G +HG G++A+ +F ML G+ P V F +L ACSH+GL
Sbjct: 477 LFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGL 536
Query: 221 VDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMH-EPHAGAWGALL 279
V EG F SM +YG PS H+ACMVD+L R+GHL A + +++M EP + W LL
Sbjct: 537 VKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLL 596
Query: 280 GACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQK 339
GAC++H D++L V+ +LFEL+P N ++LLSNI++A + + VR ++R + K
Sbjct: 597 GACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAK 656
Query: 340 IPG 342
PG
Sbjct: 657 APG 659
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 123/262 (46%), Gaps = 8/262 (3%)
Query: 40 FTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNV 99
T I Y+K G + LF + + D+VA++A+I GY NG+ +L +F E+
Sbjct: 259 LTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGA 318
Query: 100 KPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRAL 159
+ LVSL+ + GHL L + Y KS+ L V AL + +K ++ A
Sbjct: 319 RLRSSTLVSLVPVS---GHLMLIYAIHGYCLKSNF-LSHASVSTALTTVYSKLNEIESAR 374
Query: 160 KLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSG 219
KLF E P++ L S+ +MI G + +G EDA+ LF M P+ V T IL+AC+ G
Sbjct: 375 KLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLG 434
Query: 220 LVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALL 279
+ G + + + S ++ + ++ G + +A L M + + W ++
Sbjct: 435 ALSLG-KWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMI 493
Query: 280 GACKLHGDSDLGEIVANQLFEL 301
LHG G+ N +E+
Sbjct: 494 SGYGLHGQ---GQEALNIFYEM 512
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 133/286 (46%), Gaps = 33/286 (11%)
Query: 41 TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKN-V 99
+ ++ Y K + AR +F++ EKD + W+ +ISGY +N ++++VF ++ +++
Sbjct: 158 SNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCT 217
Query: 100 KPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRAL 159
+ D L+ ++ A ++L L L + S +K+ D+V+ + + +KCG +
Sbjct: 218 RLDTTTLLDILPAVAELQELRLGMQIHSLATKTGC-YSHDYVLTGFISLYSKCGKIKMGS 276
Query: 160 KLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEG----------LVPDEVAFT 209
LF+E K D+V+Y +MI G + +G E ++ LF +++ G LVP
Sbjct: 277 ALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLM 336
Query: 210 IILTA---------CSHSGL------VDEGWNYFQSMKQKYGISP--SPDHFACMVDLLS 252
+I SH+ + V N +S ++ + SP S + M+ +
Sbjct: 337 LIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYT 396
Query: 253 RSGHLGDAYELMKSMHE----PHAGAWGALLGACKLHGDSDLGEIV 294
++G DA L + M + P+ +L AC G LG+ V
Sbjct: 397 QNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWV 442
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 113/253 (44%), Gaps = 44/253 (17%)
Query: 2 PQRNVASWNAMLCGFVKDGDLSSARGVFDAMP---------------------------- 33
P++++ SWNAM+ G+ ++G A +F M
Sbjct: 381 PEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGK 440
Query: 34 -----------EKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNG 82
E ++ T +I YAK G +A AR LF+ T+K+ V W+ +ISGY +G
Sbjct: 441 WVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHG 500
Query: 83 QPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHL-ELAQWVDSYVSKSSIDLQQDHV 141
Q +AL +F EM + + P + ++ A S G + E + +S + + + H
Sbjct: 501 QGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHY 560
Query: 142 IAALLDMNAKCGNMDRALKLFKEMPKRDLVS-YCSMIQGLSIHGCGEDAVRLFNSMLMEG 200
A ++D+ + G++ RAL+ + M S + +++ IH + R + L E
Sbjct: 561 -ACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHK-DTNLARTVSEKLFE- 617
Query: 201 LVPDEVAFTIILT 213
L PD V + ++L+
Sbjct: 618 LDPDNVGYHVLLS 630
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 252 bits (643), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 122/310 (39%), Positives = 197/310 (63%), Gaps = 4/310 (1%)
Query: 36 NVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEM- 94
+V TT++D YA+ G + A ++F ++VV+WSA+I+ Y +NG+ +AL+ F EM
Sbjct: 216 HVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMM 275
Query: 95 -ESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCG 153
E+K+ P+ +VS++ A + L LE + + Y+ + +D VI+AL+ M +CG
Sbjct: 276 RETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILP-VISALVTMYGRCG 334
Query: 154 NMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILT 213
++ ++F M RD+VS+ S+I +HG G+ A+++F ML G P V F +L
Sbjct: 335 KLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLG 394
Query: 214 ACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMH-EPHA 272
ACSH GLV+EG F++M + +GI P +H+ACMVDLL R+ L +A ++++ M EP
Sbjct: 395 ACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGP 454
Query: 273 GAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWIDVSLVRSRM 332
WG+LLG+C++HG+ +L E + +LF LEP+NA NY+LL++IYA A+ W +V V+ +
Sbjct: 455 KVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLL 514
Query: 333 RERSVQKIPG 342
R +QK+PG
Sbjct: 515 EHRGLQKLPG 524
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/293 (22%), Positives = 134/293 (45%), Gaps = 12/293 (4%)
Query: 22 LSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQN 81
L R + D +++ T +I Y+ G + AR +F++ ++ + W+AL
Sbjct: 97 LRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLA 156
Query: 82 GQPNQALKVFLEMESKNVKPDEF----ILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQ 137
G + L ++ +M V+ D F +L + +++ + HL + + +++++
Sbjct: 157 GHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYS-S 215
Query: 138 QDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSML 197
+++ L+DM A+ G +D A +F MP R++VS+ +MI + +G +A+R F M+
Sbjct: 216 HVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMM 275
Query: 198 MEGL--VPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSG 255
E P+ V +L AC+ +++G + G+ + +V + R G
Sbjct: 276 RETKDSSPNSVTMVSVLQACASLAALEQG-KLIHGYILRRGLDSILPVISALVTMYGRCG 334
Query: 256 HLGDAYELMKSMHEPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAAN 308
L + MH+ +W +L+ + +HG A Q+FE N A+
Sbjct: 335 KLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGK----KAIQIFEEMLANGAS 383
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 99/216 (45%), Gaps = 17/216 (7%)
Query: 74 LISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSS 133
LI + G+ QA++V + S + + E +++ +S L A V ++ +
Sbjct: 52 LIQSLCKEGKLKQAIRVLSQESSPSQQTYELLILCCGHRSS----LSDALRVHRHILDNG 107
Query: 134 IDLQQDHVIAA-LLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRL 192
D QD +A L+ M + G++D A K+F + KR + + ++ + L++ G GE+ + L
Sbjct: 108 SD--QDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGL 165
Query: 193 FNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQ------KYGISPSPDHFAC 246
+ M G+ D +T +L AC S + N+ K+ + G S
Sbjct: 166 YWKMNRIGVESDRFTYTYVLKACVAS---ECTVNHLMKGKEIHAHLTRRGYSSHVYIMTT 222
Query: 247 MVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGAC 282
+VD+ +R G + A + M + +W A++ AC
Sbjct: 223 LVDMYARFGCVDYASYVFGGMPVRNVVSWSAMI-AC 257
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 251 bits (641), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 128/340 (37%), Positives = 204/340 (60%), Gaps = 6/340 (1%)
Query: 10 NAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFE----QATE 65
+AM+ + K G + +F+ I G ++ G + A +FE Q E
Sbjct: 291 SAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTME 350
Query: 66 KDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWV 125
+VV+W+++I+G QNG+ +AL++F EM+ VKP+ + S++ A + L +
Sbjct: 351 LNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRST 410
Query: 126 DSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGC 185
+ + + L HV +AL+DM AKCG ++ + +F MP ++LV + S++ G S+HG
Sbjct: 411 HGFAVRVHL-LDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGK 469
Query: 186 GEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFA 245
++ + +F S++ L PD ++FT +L+AC GL DEGW YF+ M ++YGI P +H++
Sbjct: 470 AKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYS 529
Query: 246 CMVDLLSRSGHLGDAYELMKSM-HEPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQ 304
CMV+LL R+G L +AY+L+K M EP + WGALL +C+L + DL EI A +LF LEP+
Sbjct: 530 CMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPE 589
Query: 305 NAANYILLSNIYAAAERWIDVSLVRSRMRERSVQKIPGCS 344
N Y+LLSNIYAA W +V +R++M ++K PGCS
Sbjct: 590 NPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCS 629
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 122/234 (52%), Gaps = 6/234 (2%)
Query: 11 AMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMA-AARFLFEQAT---EK 66
+M +++ G + AR VFD M +K+VV+ + ++ YA+ G + R L E + E
Sbjct: 156 SMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEA 215
Query: 67 DVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVD 126
++V+W+ ++SG+ ++G +A+ +F ++ PD+ + S++ + L + + +
Sbjct: 216 NIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIH 275
Query: 127 SYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCG 186
YV K + L+ VI+A++DM K G++ + LF + + + I GLS +G
Sbjct: 276 GYVIKQGL-LKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLV 334
Query: 187 EDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPS 240
+ A+ +F + + + V++T I+ C+ +G E F+ M Q G+ P+
Sbjct: 335 DKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREM-QVAGVKPN 387
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 90/197 (45%), Gaps = 2/197 (1%)
Query: 43 MIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPD 102
+I Y+ A + + + + ++S+LI + Q++ VF M S + PD
Sbjct: 56 LIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPD 115
Query: 103 EFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLF 162
+L +L ++L ++ + + S +D+ V ++ M +CG M A K+F
Sbjct: 116 SHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDA-FVQGSMFHMYMRCGRMGDARKVF 174
Query: 163 KEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVD 222
M +D+V+ +++ + GC E+ VR+ + M G+ + V++ IL+ + SG
Sbjct: 175 DRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHK 234
Query: 223 EGWNYFQSMKQKYGISP 239
E FQ + G P
Sbjct: 235 EAVVMFQKI-HHLGFCP 250
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 251 bits (641), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 132/349 (37%), Positives = 206/349 (59%), Gaps = 9/349 (2%)
Query: 4 RNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQA 63
+NV +W+ ML +V + + AR F+ +PEKN ++ M+ GY + GD+ AR +F +
Sbjct: 175 KNVKAWSVMLGVYVNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRV 234
Query: 64 TEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQ 123
+D+V W+ LI+GY QNG + A+ F M+ + +PD + S++SA +Q G L++ +
Sbjct: 235 FARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGR 294
Query: 124 WVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIH 183
V S ++ I+L Q V AL+DM AKCG+++ A +F+ + R + SMI L+IH
Sbjct: 295 EVHSLINHRGIELNQ-FVSNALIDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIH 353
Query: 184 GCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDH 243
G G++A+ +F++M L PDE+ F +LTAC H G + EG F MK + + P+ H
Sbjct: 354 GKGKEALEMFSTMESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEMKTQ-DVKPNVKH 412
Query: 244 FACMVDLLSRSGHLGDAYELMKSMH-EPHAGAWGALLGACKLHGDSDLGEIVANQLFELE 302
F C++ LL RSG L +AY L+K MH +P+ GALLGACK+H D+++ E V ++ E
Sbjct: 413 FGCLIHLLGRSGKLKEAYRLVKEMHVKPNDTVLGALLGACKVHMDTEMAEQVM-KIIETA 471
Query: 303 PQNAANY-----ILLSNIYAAAERWIDVSLVRSRMRERSVQKIPGCSKL 346
+Y +SN+YA ERW +R M +R ++K PG S L
Sbjct: 472 GSITNSYSENHLASISNLYAHTERWQTAEALRVEMEKRGLEKSPGLSSL 520
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 139/281 (49%), Gaps = 15/281 (5%)
Query: 10 NAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATE-KDV 68
++++ + K G + SAR VFD MPE+NV ++ MI GY GD A LFE+ + ++
Sbjct: 85 SSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLASGLFEEISVCRNT 144
Query: 69 VAWSALISGYVQNGQPNQALKVFLEM--ESKNVKPDEFILVSLMSATSQLG-HLELAQWV 125
V W +I GY + + +A ++F M E KNVK + + LG ++ +
Sbjct: 145 VTWIEMIKGYGKRIEIEKARELFERMPFELKNVK----------AWSVMLGVYVNNRKME 194
Query: 126 DSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGC 185
D+ I + V + ++ + G++ A +F + RDLV + ++I G + +G
Sbjct: 195 DARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGY 254
Query: 186 GEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFA 245
+DA+ F +M EG PD V + IL+AC+ SG +D G S+ GI +
Sbjct: 255 SDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVG-REVHSLINHRGIELNQFVSN 313
Query: 246 CMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHG 286
++D+ ++ G L +A + +S+ +++ +HG
Sbjct: 314 ALIDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHG 354
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 251 bits (640), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 132/381 (34%), Positives = 213/381 (55%), Gaps = 40/381 (10%)
Query: 1 MPQRNVASWNAMLCGFVK--------------------------DGDLSSARGVFDAMP- 33
MPQRNV SW M+ + K L S G+ D
Sbjct: 122 MPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDVRML 181
Query: 34 ---------EKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQP 84
E +V + +ID +AK G+ A +F++ D + W+++I G+ QN +
Sbjct: 182 HCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRS 241
Query: 85 NQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAA 144
+ AL++F M+ ++ L S++ A + L LEL ++ K DL ++ A
Sbjct: 242 DVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYDQDLILNN---A 298
Query: 145 LLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPD 204
L+DM KCG+++ AL++F +M +RD++++ +MI GL+ +G ++A++LF M G P+
Sbjct: 299 LVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPN 358
Query: 205 EVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELM 264
+ +L ACSH+GL+++GW YF+SMK+ YGI P +H+ CM+DLL ++G L DA +L+
Sbjct: 359 YITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLL 418
Query: 265 KSMH-EPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWI 323
M EP A W LLGAC++ + L E A ++ L+P++A Y LLSNIYA +++W
Sbjct: 419 NEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWD 478
Query: 324 DVSLVRSRMRERSVQKIPGCS 344
V +R+RMR+R ++K PGCS
Sbjct: 479 SVEEIRTRMRDRGIKKEPGCS 499
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 79/170 (46%), Gaps = 28/170 (16%)
Query: 141 VIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEG 200
++ L++M K ++ A +LF +MP+R+++S+ +MI S + A+ L ML +
Sbjct: 98 LVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDN 157
Query: 201 LVPDEVAFTIILTACS--------HSGLVDEGWNYFQSMKQKYGISPSPDHF--ACMVDL 250
+ P+ ++ +L +C+ H G++ EG D F + ++D+
Sbjct: 158 VRPNVYTYSSVLRSCNGMSDVRMLHCGIIKEGL--------------ESDVFVRSALIDV 203
Query: 251 LSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHGDSDLGEIVANQLFE 300
++ G DA + M A W +++G + SD VA +LF+
Sbjct: 204 FAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSD----VALELFK 249
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 250 bits (638), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 133/375 (35%), Positives = 216/375 (57%), Gaps = 39/375 (10%)
Query: 10 NAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAK-------------------- 49
N ++ + K G LS AR V D M ++VVS+ +++ GYA+
Sbjct: 179 NGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKIS 238
Query: 50 --AGDMAA---------------ARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFL 92
AG MA+ + +F + +K +V+W+ +I Y++N P +A++++
Sbjct: 239 HDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYS 298
Query: 93 EMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKC 152
ME+ +PD + S++ A L L + + Y+ + + + + AL+DM AKC
Sbjct: 299 RMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKL-IPNLLLENALIDMYAKC 357
Query: 153 GNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIIL 212
G +++A +F+ M RD+VS+ +MI G G DAV LF+ + GLVPD +AF L
Sbjct: 358 GCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTL 417
Query: 213 TACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMH-EPH 271
ACSH+GL++EG + F+ M Y I+P +H ACMVDLL R+G + +AY ++ M EP+
Sbjct: 418 AACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPN 477
Query: 272 AGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWIDVSLVRSR 331
WGALLGAC++H D+D+G + A++LF+L P+ + Y+LLSNIYA A RW +V+ +R+
Sbjct: 478 ERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNI 537
Query: 332 MRERSVQKIPGCSKL 346
M+ + ++K PG S +
Sbjct: 538 MKSKGLKKNPGASNV 552
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 127/272 (46%), Gaps = 18/272 (6%)
Query: 43 MIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPD 102
++ YA D+A+AR +F++ E++V+ + +I YV NG + +KVF M NV+PD
Sbjct: 80 LMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPD 139
Query: 103 EFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLF 162
+ ++ A S G + + + + +K + V L+ M KCG + A +
Sbjct: 140 HYTFPCVLKACSCSGTIVIGRKIHGSATKVGLS-STLFVGNGLVSMYGKCGFLSEARLVL 198
Query: 163 KEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVD 222
EM +RD+VS+ S++ G + + +DA+ + M + D +L A S++
Sbjct: 199 DEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNT--TT 256
Query: 223 EGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMH----EPHAGAWGAL 278
E Y + M K G S + M+ + ++ +A EL M EP A + ++
Sbjct: 257 ENVMYVKDMFFKMG-KKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSV 315
Query: 279 LGAC----------KLHGDSDLGEIVANQLFE 300
L AC K+HG + +++ N L E
Sbjct: 316 LPACGDTSALSLGKKIHGYIERKKLIPNLLLE 347
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 249 bits (637), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 133/388 (34%), Positives = 214/388 (55%), Gaps = 43/388 (11%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMP------EKNVVSFTTMIDG-------- 46
MP+R++ SWN+++ G+ G L V M N V+F +MI
Sbjct: 92 MPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKE 151
Query: 47 ---------------------------YAKAGDMAAARFLFEQATEKDVVAWSALISGYV 79
Y K GD+ ++ LFE + K++V+W+ +I ++
Sbjct: 152 EGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHL 211
Query: 80 QNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQD 139
QNG + L F +PD+ ++++ + +G + LAQ + + +
Sbjct: 212 QNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKC 271
Query: 140 HVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLME 199
+ ALLD+ +K G ++ + +F E+ D +++ +M+ + HG G DA++ F M+
Sbjct: 272 -ITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHY 330
Query: 200 GLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGD 259
G+ PD V FT +L ACSHSGLV+EG +YF++M ++Y I P DH++CMVDLL RSG L D
Sbjct: 331 GISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQD 390
Query: 260 AYELMKSM-HEPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAA 318
AY L+K M EP +G WGALLGAC+++ D+ LG A +LFELEP++ NY++LSNIY+A
Sbjct: 391 AYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAERLFELEPRDGRNYVMLSNIYSA 450
Query: 319 AERWIDVSLVRSRMRERSVQKIPGCSKL 346
+ W D S +R+ M+++ + + GCS +
Sbjct: 451 SGLWKDASRIRNLMKQKGLVRASGCSYI 478
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 119/246 (48%), Gaps = 4/246 (1%)
Query: 43 MIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNV--K 100
++ Y + G A LF++ E+D+V+W++LISGY G + +V M V +
Sbjct: 72 LVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFR 131
Query: 101 PDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALK 160
P+E +S++SA G E + + V K + L++ V+ A ++ K G++ + K
Sbjct: 132 PNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGV-LEEVKVVNAFINWYGKTGDLTSSCK 190
Query: 161 LFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGL 220
LF+++ ++LVS+ +MI +G E + FN G PD+ F +L +C G+
Sbjct: 191 LFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGV 250
Query: 221 VDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLG 280
V + G S + ++DL S+ G L D+ + + P + AW A+L
Sbjct: 251 VRLAQG-IHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLA 309
Query: 281 ACKLHG 286
A HG
Sbjct: 310 AYATHG 315
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 249 bits (637), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 135/349 (38%), Positives = 214/349 (61%), Gaps = 5/349 (1%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLF 60
+ + +V A++ + K G AR VFD M +KN V++ TMIDGY ++G + A +F
Sbjct: 104 LDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQVDNAAKMF 163
Query: 61 EQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLE 120
++ E+D+++W+A+I+G+V+ G +AL F EM+ VKPD +++ ++A + LG L
Sbjct: 164 DKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACTNLGALS 223
Query: 121 LAQWVDSYVSKSSIDLQQD-HVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQG 179
WV YV S D + + V +L+D+ +CG ++ A ++F M KR +VS+ S+I G
Sbjct: 224 FGLWVHRYVL--SQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVG 281
Query: 180 LSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISP 239
+ +G +++ F M +G PD V FT LTACSH GLV+EG YFQ MK Y ISP
Sbjct: 282 FAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMKCDYRISP 341
Query: 240 SPDHFACMVDLLSRSGHLGDAYELMKSM-HEPHAGAWGALLGACKLHGDSD-LGEIVANQ 297
+H+ C+VDL SR+G L DA +L++SM +P+ G+LL AC HG++ L E +
Sbjct: 342 RIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNHGNNIVLAERLMKH 401
Query: 298 LFELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQKIPGCSKL 346
L +L ++ +NY++LSN+YAA +W S +R +M+ ++K PG S +
Sbjct: 402 LTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPGFSSI 450
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 116/261 (44%), Gaps = 36/261 (13%)
Query: 62 QATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQL--GHL 119
Q+T + V+W++ I+ +NG+ +A K F +M V+P+ ++L+S G
Sbjct: 30 QSTSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSE 89
Query: 120 ELAQWVDSYVSKSSIDLQQDHVIAALLDMNAK---------------------------- 151
L + Y K +D V A++ M +K
Sbjct: 90 ALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDG 149
Query: 152 ---CGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAF 208
G +D A K+F +MP+RDL+S+ +MI G G E+A+ F M + G+ PD VA
Sbjct: 150 YMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAI 209
Query: 209 TIILTACSHSGLVDEG-WNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSM 267
L AC++ G + G W + + Q + + + ++DL R G + A ++ +M
Sbjct: 210 IAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSN--SLIDLYCRCGCVEFARQVFYNM 267
Query: 268 HEPHAGAWGALLGACKLHGDS 288
+ +W +++ +G++
Sbjct: 268 EKRTVVSWNSVIVGFAANGNA 288
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 249 bits (636), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 125/307 (40%), Positives = 190/307 (61%), Gaps = 5/307 (1%)
Query: 39 SFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKN 98
SF TM Y K G + A R LF++ K ++ W+A+ISGY QNG L+++ +M+S
Sbjct: 196 SFITM---YMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSG 252
Query: 99 VKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRA 158
V PD F LVS++S+ + LG ++ V V + + V A + M A+CGN+ +A
Sbjct: 253 VCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGF-VPNVFVSNASISMYARCGNLAKA 311
Query: 159 LKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHS 218
+F MP + LVS+ +MI +HG GE + LF+ M+ G+ PD F ++L+ACSHS
Sbjct: 312 RAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHS 371
Query: 219 GLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMH-EPHAGAWGA 277
GL D+G F++MK++Y + P P+H++C+VDLL R+G L +A E ++SM EP WGA
Sbjct: 372 GLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGA 431
Query: 278 LLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSV 337
LLGACK+H + D+ E+ ++ E EP N Y+L+SNIY+ ++ + +R MRER+
Sbjct: 432 LLGACKIHKNVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAF 491
Query: 338 QKIPGCS 344
+K PG S
Sbjct: 492 RKKPGYS 498
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 144/306 (47%), Gaps = 6/306 (1%)
Query: 40 FTTMIDGYAKAGDMAAARFLFEQATEKD--VVAWSALISGYVQNGQPNQALKVFLEMESK 97
T +I Y K G +A AR +FE+ + V ++ALISGY N + A +F M+
Sbjct: 91 LTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKET 150
Query: 98 NVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDR 157
V D ++ L+ + +L L + + K +D + V+ + + M KCG+++
Sbjct: 151 GVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLD-SEVAVLNSFITMYMKCGSVEA 209
Query: 158 ALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSH 217
+LF EMP + L+++ ++I G S +G D + L+ M G+ PD +L++C+H
Sbjct: 210 GRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAH 269
Query: 218 SGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGA 277
G G + + + G P+ + + +R G+L A + M +W A
Sbjct: 270 LGAKKIG-HEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTA 328
Query: 278 LLGACKLHGDSDLGEIVANQLFE--LEPQNAANYILLSNIYAAAERWIDVSLVRSRMRER 335
++G +HG ++G ++ + + + + P A ++LS + + L R+ RE
Sbjct: 329 MIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREY 388
Query: 336 SVQKIP 341
++ P
Sbjct: 389 KLEPGP 394
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 99/205 (48%), Gaps = 12/205 (5%)
Query: 36 NVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEME 95
NV I YA+ G++A AR +F+ K +V+W+A+I Y +G L +F +M
Sbjct: 291 NVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMI 350
Query: 96 SKNVKPDEFILVSLMSATSQLG----HLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAK 151
+ ++PD + V ++SA S G LEL + + + ++ +H + L+D+ +
Sbjct: 351 KRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMK---REYKLEPGPEH-YSCLVDLLGR 406
Query: 152 CGNMDRALKLFKEMP-KRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTI 210
G +D A++ + MP + D + +++ IH D L + ++E P+ + + +
Sbjct: 407 AGRLDEAMEFIESMPVEPDGAVWGALLGACKIHK-NVDMAELAFAKVIE-FEPNNIGYYV 464
Query: 211 ILTACSHSGLVDEG-WNYFQSMKQK 234
+++ EG W M+++
Sbjct: 465 LMSNIYSDSKNQEGIWRIRVMMRER 489
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 63/134 (47%), Gaps = 3/134 (2%)
Query: 85 NQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAA 144
++++ ++ M PD F ++ + + L Q + +V+K + + V+ A
Sbjct: 35 SESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVTKGGCE-TEPFVLTA 93
Query: 145 LLDMNAKCGNMDRALKLFKEMPKRDLVSYC--SMIQGLSIHGCGEDAVRLFNSMLMEGLV 202
L+ M KCG + A K+F+E P+ +S C ++I G + + DA +F M G+
Sbjct: 94 LISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETGVS 153
Query: 203 PDEVAFTIILTACS 216
D V ++ C+
Sbjct: 154 VDSVTMLGLVPLCT 167
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 248 bits (634), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 136/384 (35%), Positives = 204/384 (53%), Gaps = 41/384 (10%)
Query: 1 MPQRNVASWNAMLCGF-----------------------------------VKDGDLSSA 25
+P R+V +W A+ G+ V GDL S
Sbjct: 172 IPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSG 231
Query: 26 RGVFDAMPE----KNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQN 81
+ M E KN TT+++ YAK G M AR +F+ EKD+V WS +I GY N
Sbjct: 232 EWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASN 291
Query: 82 GQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHV 141
P + +++FL+M +N+KPD+F +V +S+ + LG L+L +W S + + L +
Sbjct: 292 SFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEF-LTNLFM 350
Query: 142 IAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGL 201
AL+DM AKCG M R ++FKEM ++D+V + I GL+ +G + + +F G+
Sbjct: 351 ANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGI 410
Query: 202 VPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAY 261
PD F +L C H+GL+ +G +F ++ Y + + +H+ CMVDL R+G L DAY
Sbjct: 411 SPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAY 470
Query: 262 ELMKSM-HEPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAE 320
L+ M P+A WGALL C+L D+ L E V +L LEP NA NY+ LSNIY+
Sbjct: 471 RLICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGG 530
Query: 321 RWIDVSLVRSRMRERSVQKIPGCS 344
RW + + VR M ++ ++KIPG S
Sbjct: 531 RWDEAAEVRDMMNKKGMKKIPGYS 554
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 137/236 (58%), Gaps = 6/236 (2%)
Query: 36 NVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEME 95
+V + T+++ Y+ +G + A LF++ ++ VV W+AL SGY +G+ +A+ +F +M
Sbjct: 145 DVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMV 204
Query: 96 SKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVI-AALLDMNAKCGN 154
VKPD + +V ++SA +G L+ +W+ Y+ + +++Q++ + L+++ AKCG
Sbjct: 205 EMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEE--MEMQKNSFVRTTLVNLYAKCGK 262
Query: 155 MDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTA 214
M++A +F M ++D+V++ +MIQG + + ++ + LF ML E L PD+ + L++
Sbjct: 263 MEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSS 322
Query: 215 CSHSGLVDEG-WNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHE 269
C+ G +D G W S+ ++ + ++D+ ++ G + +E+ K M E
Sbjct: 323 CASLGALDLGEWGI--SLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKE 376
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 108/229 (47%), Gaps = 16/229 (6%)
Query: 58 FLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLG 117
LF ++ +++LI+G+V N ++ L +FL + + F ++ A ++
Sbjct: 66 LLFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRAS 125
Query: 118 HLELAQWVDSYVSKSSIDLQQDHVIAA---LLDMNAKCGNMDRALKLFKEMPKRDLVSYC 174
+L + S V K +H +AA LL + + G ++ A KLF E+P R +V++
Sbjct: 126 SRKLGIDLHSLVVKCGF----NHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWT 181
Query: 175 SMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEG-W--NYFQSM 231
++ G + G +A+ LF M+ G+ PD +L+AC H G +D G W Y + M
Sbjct: 182 ALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEM 241
Query: 232 K-QKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALL 279
+ QK + +V+L ++ G + A + SM E W ++
Sbjct: 242 EMQKNSFVRTT-----LVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMI 285
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 248 bits (633), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 127/337 (37%), Positives = 212/337 (62%), Gaps = 3/337 (0%)
Query: 5 NVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQAT 64
NV +++ + K G + SA+ FD M K++ +TT+I GYAK GDM AA LF +
Sbjct: 213 NVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMP 272
Query: 65 EKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQW 124
EK+ V+W+ALI+GYV+ G N+AL +F +M + VKP++F S + A++ + L +
Sbjct: 273 EKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKE 332
Query: 125 VDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEM-PKRDLVSYCSMIQGLSIH 183
+ Y+ ++++ VI++L+DM +K G+++ + ++F+ K D V + +MI L+ H
Sbjct: 333 IHGYMIRTNVR-PNAIVISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQH 391
Query: 184 GCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDH 243
G G A+R+ + M+ + P+ +IL ACSHSGLV+EG +F+SM ++GI P +H
Sbjct: 392 GLGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEH 451
Query: 244 FACMVDLLSRSGHLGDAYELMKSM-HEPHAGAWGALLGACKLHGDSDLGEIVANQLFELE 302
+AC++DLL R+G + ++ M EP W A+LG C++HG+ +LG+ A++L +L+
Sbjct: 452 YACLIDLLGRAGCFKELMRKIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAADELIKLD 511
Query: 303 PQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQK 339
P+++A YILLS+IYA +W V +R M++R V K
Sbjct: 512 PESSAPYILLSSIYADHGKWELVEKLRGVMKKRRVNK 548
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 91/356 (25%), Positives = 162/356 (45%), Gaps = 45/356 (12%)
Query: 10 NAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVV 69
N ++ ++K G A VFD M +N+ S+ M+ GY K+G + AR +F+ E+DVV
Sbjct: 86 NHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVV 145
Query: 70 AWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQW----- 124
+W+ ++ GY Q+G ++AL + E +K +EF L++A + L+L +
Sbjct: 146 SWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQV 205
Query: 125 ---------------VDSYV-------SKSSID---LQQDHVIAALLDMNAKCGNMDRAL 159
+D+Y +K D ++ H+ L+ AK G+M+ A
Sbjct: 206 LVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAE 265
Query: 160 KLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSG 219
KLF EMP+++ VS+ ++I G G G A+ LF M+ G+ P++ F+ L A +
Sbjct: 266 KLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIA 325
Query: 220 LVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGA-WGAL 278
+ G M + + P+ + ++D+ S+SG L + + + + H W +
Sbjct: 326 SLRHGKEIHGYM-IRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTM 384
Query: 279 LGACKLHGDSDLGEIVANQL-----FELEPQNAANYILL-----SNIYAAAERWID 324
+ A HG LG L F ++P ++L S + RW +
Sbjct: 385 ISALAQHG---LGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEGLRWFE 437
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 248 bits (633), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 138/309 (44%), Positives = 194/309 (62%), Gaps = 4/309 (1%)
Query: 41 TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVK 100
T ++ Y K G++++A FLFE KD+VAW+A ++ VQ G AL+ F +M + V+
Sbjct: 148 TELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQ 207
Query: 101 PDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALK 160
D F +VS++SA QLG LE+ + + K ID V A LDM+ KCGN + A
Sbjct: 208 FDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNII-VENARLDMHLKCGNTEAARV 266
Query: 161 LFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGL 220
LF+EM +R++VS+ +MI G +++G +A+ LF +M EGL P+ V F +L+ACSH+GL
Sbjct: 267 LFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGL 326
Query: 221 VDEGWNYFQSMKQK--YGISPSPDHFACMVDLLSRSGHLGDAYELMKSMH-EPHAGAWGA 277
V+EG YF M Q + P +H+ACMVDLL RSG L +AYE +K M EP G WGA
Sbjct: 327 VNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGA 386
Query: 278 LLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSV 337
LLGAC +H D LG+ VA+ L E P + ++LLSNIYAAA +W V VRS+MR+
Sbjct: 387 LLGACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWDCVDKVRSKMRKLGT 446
Query: 338 QKIPGCSKL 346
+K+ S +
Sbjct: 447 KKVAAYSSV 455
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 121/256 (47%), Gaps = 5/256 (1%)
Query: 34 EKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLE 93
EKN + T +++ GDM AR +F++ + + W+ L GYV+N P ++L ++ +
Sbjct: 41 EKNSL-LTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKK 99
Query: 94 MESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCG 153
M V+PDEF ++ A SQLG + ++V K V L+ M K G
Sbjct: 100 MRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGC-LGIVATELVMMYMKFG 158
Query: 154 NMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILT 213
+ A LF+ M +DLV++ + + G A+ FN M + + D +L+
Sbjct: 159 ELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLS 218
Query: 214 ACSHSGLVDEGWN-YFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHA 272
AC G ++ G Y ++ K++ + ++ +D+ + G+ A L + M + +
Sbjct: 219 ACGQLGSLEIGEEIYDRARKEEIDCNIIVEN--ARLDMHLKCGNTEAARVLFEEMKQRNV 276
Query: 273 GAWGALLGACKLHGDS 288
+W ++ ++GDS
Sbjct: 277 VSWSTMIVGYAMNGDS 292
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 78/134 (58%), Gaps = 4/134 (2%)
Query: 36 NVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEME 95
N++ +D + K G+ AAR LFE+ +++VV+WS +I GY NG +AL +F M+
Sbjct: 244 NIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQ 303
Query: 96 SKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKS---SIDLQQDHVIAALLDMNAKC 152
++ ++P+ + ++SA S G + + S + +S +++ +++H A ++D+ +
Sbjct: 304 NEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHY-ACMVDLLGRS 362
Query: 153 GNMDRALKLFKEMP 166
G ++ A + K+MP
Sbjct: 363 GLLEEAYEFIKKMP 376
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 248 bits (632), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 129/384 (33%), Positives = 216/384 (56%), Gaps = 41/384 (10%)
Query: 1 MPQRNVASWNAMLCGFVKDG----------------------DLSSARGVF----DAMPE 34
MP+++V S+N ++ G+ + G LSS +F D +
Sbjct: 202 MPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKG 261
Query: 35 KNVVSF-------------TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQN 81
K + + ++++D YAK+ + + +F + +D ++W++L++GYVQN
Sbjct: 262 KEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQN 321
Query: 82 GQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHV 141
G+ N+AL++F +M + VKP S++ A + L L L + + YV + +
Sbjct: 322 GRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFG-SNIFI 380
Query: 142 IAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGL 201
+AL+DM +KCGN+ A K+F M D VS+ ++I G ++HG G +AV LF M +G+
Sbjct: 381 ASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGV 440
Query: 202 VPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAY 261
P++VAF +LTACSH GLVDE W YF SM + YG++ +H+A + DLL R+G L +AY
Sbjct: 441 KPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAY 500
Query: 262 ELMKSMH-EPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAE 320
+ M EP W LL +C +H + +L E VA ++F ++ +N Y+L+ N+YA+
Sbjct: 501 NFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNG 560
Query: 321 RWIDVSLVRSRMRERSVQKIPGCS 344
RW +++ +R RMR++ ++K P CS
Sbjct: 561 RWKEMAKLRLRMRKKGLRKKPACS 584
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 137/273 (50%), Gaps = 12/273 (4%)
Query: 20 GDLSSARGVFDAMPEKNV------VSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSA 73
G S VFD MP++ V T I + + + R +FE KDVV+++
Sbjct: 157 GSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFG----IDSVRRVFEVMPRKDVVSYNT 212
Query: 74 LISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSS 133
+I+GY Q+G AL++ EM + ++KPD F L S++ S+ + + + YV +
Sbjct: 213 IIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKG 272
Query: 134 IDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLF 193
ID ++ ++L+DM AK ++ + ++F + RD +S+ S++ G +G +A+RLF
Sbjct: 273 ID-SDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLF 331
Query: 194 NSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSR 253
M+ + P VAF+ ++ AC+H + G + G + + +VD+ S+
Sbjct: 332 RQMVTAKVKPGAVAFSSVIPACAHLATLHLG-KQLHGYVLRGGFGSNIFIASALVDMYSK 390
Query: 254 SGHLGDAYELMKSMHEPHAGAWGALLGACKLHG 286
G++ A ++ M+ +W A++ LHG
Sbjct: 391 CGNIKAARKIFDRMNVLDEVSWTAIIMGHALHG 423
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 246 bits (629), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 140/386 (36%), Positives = 213/386 (55%), Gaps = 43/386 (11%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAM----PEKNVVSFTT-------------- 42
MP++NV SW AM+ + + G S A VF M + N +F T
Sbjct: 113 MPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLG 172
Query: 43 ---------------------MIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQN 81
++D YAKAG + AR +FE E+DVV+ +A+I+GY Q
Sbjct: 173 KQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQL 232
Query: 82 GQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHV 141
G +AL++F + S+ + P+ SL++A S L L+ + +V + + +
Sbjct: 233 GLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAV-L 291
Query: 142 IAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGL 201
+L+DM +KCGN+ A +LF MP+R +S+ +M+ G S HG G + + LF M E
Sbjct: 292 QNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKR 351
Query: 202 V-PDEVAFTIILTACSHSGLVDEGWNYFQSM-KQKYGISPSPDHFACMVDLLSRSGHLGD 259
V PD V +L+ CSH + D G N F M +YG P +H+ C+VD+L R+G + +
Sbjct: 352 VKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDE 411
Query: 260 AYELMKSM-HEPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAA 318
A+E +K M +P AG G+LLGAC++H D+GE V +L E+EP+NA NY++LSN+YA+
Sbjct: 412 AFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYAS 471
Query: 319 AERWIDVSLVRSRMRERSVQKIPGCS 344
A RW DV+ VR+ M +++V K PG S
Sbjct: 472 AGRWADVNNVRAMMMQKAVTKEPGRS 497
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/265 (31%), Positives = 143/265 (53%), Gaps = 14/265 (5%)
Query: 41 TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVK 100
T ++ Y K + AR + ++ EK+VV+W+A+IS Y Q G ++AL VF EM + K
Sbjct: 91 TRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGK 150
Query: 101 PDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALK 160
P+EF +++++ + L L + + + K + D V ++LLDM AK G + A +
Sbjct: 151 PNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYD-SHIFVGSSLLDMYAKAGQIKEARE 209
Query: 161 LFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGL 220
+F+ +P+RD+VS ++I G + G E+A+ +F+ + EG+ P+ V + +LTA S L
Sbjct: 210 IFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLAL 269
Query: 221 VDEGWNYFQSMKQK----YGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWG 276
+D G + ++ Y + + ++D+ S+ G+L A L +M E A +W
Sbjct: 270 LDHGKQAHCHVLRRELPFYAVLQNS-----LIDMYSKCGNLSYARRLFDNMPERTAISWN 324
Query: 277 ALLGACKLHGDSDLGEIVANQLFEL 301
A+L HG LG V +LF L
Sbjct: 325 AMLVGYSKHG---LGREVL-ELFRL 345
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 246 bits (627), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 125/336 (37%), Positives = 203/336 (60%), Gaps = 2/336 (0%)
Query: 10 NAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVV 69
N+++ + K G AR +F+ MP K++VS+ ++ GY +G + A+ +F++ EK+++
Sbjct: 324 NSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNIL 383
Query: 70 AWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYV 129
+W +ISG +NG + LK+F M+ + +P ++ + + + LG Q + +
Sbjct: 384 SWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQL 443
Query: 130 SKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDA 189
K D AL+ M AKCG ++ A ++F+ MP D VS+ ++I L HG G +A
Sbjct: 444 LKIGFDSSLS-AGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEA 502
Query: 190 VRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVD 249
V ++ ML +G+ PD + +LTACSH+GLVD+G YF SM+ Y I P DH+A ++D
Sbjct: 503 VDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLID 562
Query: 250 LLSRSGHLGDAYELMKSM-HEPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAAN 308
LL RSG DA +++S+ +P A W ALL C++HG+ +LG I A++LF L P++
Sbjct: 563 LLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGT 622
Query: 309 YILLSNIYAAAERWIDVSLVRSRMRERSVQKIPGCS 344
Y+LLSN++AA +W +V+ VR MR+R V+K CS
Sbjct: 623 YMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACS 658
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 89/300 (29%), Positives = 147/300 (49%), Gaps = 41/300 (13%)
Query: 22 LSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEK-DVVAWSALISGYVQ 80
L SAR VFD + EK+ S+TTM+ GY K G L E + +VA++A+ISGYV
Sbjct: 204 LHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVN 263
Query: 81 NGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQD- 139
G +AL++ M S ++ DEF S++ A + G L+L + V +YV + ++D
Sbjct: 264 RGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLR-----REDF 318
Query: 140 --HVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCS---------------------- 175
H +L+ + KCG D A +F++MP +DLVS+ +
Sbjct: 319 SFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMK 378
Query: 176 ---------MIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWN 226
MI GL+ +G GE+ ++LF+ M EG P + AF+ + +C+ G G
Sbjct: 379 EKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQ 438
Query: 227 YFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHG 286
Y + K G S ++ + ++ G + +A ++ ++M + +W AL+ A HG
Sbjct: 439 YHAQL-LKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHG 497
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 143/310 (46%), Gaps = 44/310 (14%)
Query: 10 NAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQA--TEKD 67
N ++ + K +L+ AR +FD + E + ++ TTM+ GY +GD+ AR +FE+A +D
Sbjct: 53 NRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRD 112
Query: 68 VVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDS 127
V ++A+I+G+ N A+ +F +M+ + KPD F S+++ + + E Q V
Sbjct: 113 TVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVLAGLALVADDE-KQCVQF 171
Query: 128 YVS--KSSIDLQQDHVIAALLDMNAKCGN----MDRALKLFKEMPKRD------------ 169
+ + KS V AL+ + +KC + + A K+F E+ ++D
Sbjct: 172 HAAALKSGAGYITS-VSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYV 230
Query: 170 --------------------LVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFT 209
LV+Y +MI G G ++A+ + M+ G+ DE +
Sbjct: 231 KNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYP 290
Query: 210 IILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHE 269
++ AC+ +GL+ G + ++ S D+ +V L + G +A + + M
Sbjct: 291 SVIRACATAGLLQLGKQVHAYVLRREDFSFHFDN--SLVSLYYKCGKFDEARAIFEKMPA 348
Query: 270 PHAGAWGALL 279
+W ALL
Sbjct: 349 KDLVSWNALL 358
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 245 bits (626), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 131/347 (37%), Positives = 206/347 (59%), Gaps = 7/347 (2%)
Query: 5 NVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQAT 64
N+ NA+L + K + A+ FDAM +K++ S+ TM+ G+ + GDM AA+ +F+Q
Sbjct: 268 NLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMP 327
Query: 65 EKDVVAWSALISGYVQNGQPNQALK-VFLEME-SKNVKPDEFILVSLMSATSQLGHLELA 122
++D+V+W++L+ GY + G + ++ +F EM + VKPD +VSL+S + G L
Sbjct: 328 KRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHG 387
Query: 123 QWVDSYVSKSSIDLQQDHVIA-ALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLS 181
+WV V + + L+ D ++ AL+DM KCG ++RA +FK ++D+ + SMI GL+
Sbjct: 388 RWVHGLVIR--LQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLA 445
Query: 182 IHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSP 241
HG G+ A++LF M EG+ P+ V +LTACSHSGLV+EG + F MK K+G P
Sbjct: 446 FHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPET 505
Query: 242 DHFACMVDLLSRSGHLGDAYELM--KSMHEPHAGAWGALLGACKLHGDSDLGEIVANQLF 299
+H+ +VDLL R+G + +A +++ K P WG++L AC+ D + E+ +L
Sbjct: 506 EHYGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSILSACRGGEDIETAELALTELL 565
Query: 300 ELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQKIPGCSKL 346
+LEP+ Y+LLSNIYA RW R M R V+K G S +
Sbjct: 566 KLEPEKEGGYVLLSNIYATVGRWGYSDKTREAMENRGVKKTAGYSSV 612
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 137/313 (43%), Gaps = 66/313 (21%)
Query: 9 WNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDV 68
WN+++ +++ G+ A VF MP +V SF MI GYAK G F E
Sbjct: 169 WNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQG------FSLE------- 215
Query: 69 VAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSY 128
ALK++ +M S ++PDE+ ++SL+ L + L + V +
Sbjct: 216 ------------------ALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGW 257
Query: 129 VSKSSIDLQQDHVIA-ALLDMNAKC-------------------------------GNMD 156
+ + + +++ ALLDM KC G+M+
Sbjct: 258 IERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDME 317
Query: 157 RALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVR-LFNSM-LMEGLVPDEVAFTIILTA 214
A +F +MPKRDLVS+ S++ G S GC + VR LF M ++E + PD V +++
Sbjct: 318 AAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISG 377
Query: 215 CSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGA 274
+++G + G + + + + + ++D+ + G + A+ + K+ E
Sbjct: 378 AANNGELSHG-RWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEKDVAL 436
Query: 275 WGALLGACKLHGD 287
W +++ HG+
Sbjct: 437 WTSMITGLAFHGN 449
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/272 (21%), Positives = 118/272 (43%), Gaps = 9/272 (3%)
Query: 28 VFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQA 87
+ D P ++ F+ + Y + D+A FL +V ++ +IS + N+
Sbjct: 63 ICDTFPMSRLIFFSAIT--YPENLDLAKLLFL-NFTPNPNVFVYNTMISAV--SSSKNEC 117
Query: 88 LKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLD 147
++ M V PD + LM A+S L E+ Q + ++ S +++ +L+
Sbjct: 118 FGLYSSMIRHRVSPDRQTFLYLMKASSFLS--EVKQ-IHCHIIVSGCLSLGNYLWNSLVK 174
Query: 148 MNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVA 207
+ GN A K+F MP D+ S+ MI G + G +A++L+ M+ +G+ PDE
Sbjct: 175 FYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYT 234
Query: 208 FTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFA-CMVDLLSRSGHLGDAYELMKS 266
+L C H + G ++++ + S + ++D+ + G A +
Sbjct: 235 VLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDA 294
Query: 267 MHEPHAGAWGALLGACKLHGDSDLGEIVANQL 298
M + +W ++ GD + + V +Q+
Sbjct: 295 MKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQM 326
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 245 bits (625), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 133/395 (33%), Positives = 217/395 (54%), Gaps = 50/395 (12%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEK------------------------- 35
+PQ NV +W +++ GFV + S A F M
Sbjct: 168 IPQWNVVAWGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTG 227
Query: 36 ----------------------NVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSA 73
NV+ T++ID YAK GD+ AR+LF+ E+ +V+W++
Sbjct: 228 KWFHGFLQGLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNS 287
Query: 74 LISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSS 133
+I+GY QNG +AL +FL+M + PD+ +S++ A+ G +L Q + +YVSK+
Sbjct: 288 IITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTG 347
Query: 134 IDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLF 193
++ ++ AL++M AK G+ + A K F+++ K+D +++ +I GL+ HG G +A+ +F
Sbjct: 348 F-VKDAAIVCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIF 406
Query: 194 NSMLMEG-LVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLS 252
M +G PD + + +L ACSH GLV+EG YF M+ +G+ P+ +H+ CMVD+LS
Sbjct: 407 QRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILS 466
Query: 253 RSGHLGDAYELMKSMH-EPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYIL 311
R+G +A L+K+M +P+ WGALL C +H + +L + + + + E E + Y+L
Sbjct: 467 RAGRFEEAERLVKTMPVKPNVNIWGALLNGCDIHENLELTDRIRSMVAEPEELGSGIYVL 526
Query: 312 LSNIYAAAERWIDVSLVRSRMRERSVQKIPGCSKL 346
LSNIYA A RW DV L+R M+ + V K+ G S +
Sbjct: 527 LSNIYAKAGRWADVKLIRESMKSKRVDKVLGHSSV 561
Score = 114 bits (286), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 131/263 (49%), Gaps = 8/263 (3%)
Query: 34 EKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLE 93
E N+ T ++ Y G++ +FE + +VVAW +LISG+V N + + A++ F E
Sbjct: 139 EVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFRE 198
Query: 94 MESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSID--LQQD---HVIAA--LL 146
M+S VK +E I+V L+ A + + +W ++ D Q +VI A L+
Sbjct: 199 MQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGFNVILATSLI 258
Query: 147 DMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEV 206
DM AKCG++ A LF MP+R LVS+ S+I G S +G E+A+ +F ML G+ PD+V
Sbjct: 259 DMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKV 318
Query: 207 AFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKS 266
F ++ A G G + + K G +V++ +++G A + +
Sbjct: 319 TFLSVIRASMIQGCSQLGQS-IHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFED 377
Query: 267 MHEPHAGAWGALLGACKLHGDSD 289
+ + AW ++ HG +
Sbjct: 378 LEKKDTIAWTVVIIGLASHGHGN 400
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 124/266 (46%), Gaps = 13/266 (4%)
Query: 35 KNVVSFTTMID---GYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVF 91
+NV+ + +ID + +++ AR +FE V W+++I GY + P++AL +
Sbjct: 36 RNVIPLSRLIDFCTTCPETMNLSYARSVFESIDCPSVYIWNSMIRGYSNSPNPDKALIFY 95
Query: 92 LEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAK 151
EM K PD F ++ A S L ++ V +V K+ ++ +V LL M
Sbjct: 96 QEMLRKGYSPDYFTFPYVLKACSGLRDIQFGSCVHGFVVKTGFEVNM-YVSTCLLHMYMC 154
Query: 152 CGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTII 211
CG ++ L++F+++P+ ++V++ S+I G + DA+ F M G+ +E +
Sbjct: 155 CGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDL 214
Query: 212 LTACSHSGLVDEGWNYFQSMKQKYGISP---SPDHF-----ACMVDLLSRSGHLGDAYEL 263
L AC + G +F Q G P S F ++D+ ++ G L A L
Sbjct: 215 LVACGRCKDIVTG-KWFHGFLQGLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYL 273
Query: 264 MKSMHEPHAGAWGALLGACKLHGDSD 289
M E +W +++ +GD++
Sbjct: 274 FDGMPERTLVSWNSIITGYSQNGDAE 299
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 244 bits (624), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 120/333 (36%), Positives = 206/333 (61%), Gaps = 2/333 (0%)
Query: 16 FVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALI 75
+ G + A+ VFD M E+NVV + MI G+ +GD+ LF+Q +E+ +V+W+++I
Sbjct: 147 YTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMI 206
Query: 76 SGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSID 135
S + G+ +AL++F EM + PDE +V+++ ++ LG L+ +W+ S S +
Sbjct: 207 SSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLF 266
Query: 136 LQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNS 195
V AL+D K G+++ A +F++M +R++VS+ ++I G +++G GE + LF++
Sbjct: 267 KDFITVGNALVDFYCKSGDLEAATAIFRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDA 326
Query: 196 MLMEGLV-PDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRS 254
M+ EG V P+E F +L CS++G V+ G F M +++ + +H+ MVDL+SRS
Sbjct: 327 MIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMMERFKLEARTEHYGAMVDLMSRS 386
Query: 255 GHLGDAYELMKSMH-EPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLS 313
G + +A++ +K+M +A WG+LL AC+ HGD L E+ A +L ++EP N+ NY+LLS
Sbjct: 387 GRITEAFKFLKNMPVNANAAMWGSLLSACRSHGDVKLAEVAAMELVKIEPGNSGNYVLLS 446
Query: 314 NIYAAAERWIDVSLVRSRMRERSVQKIPGCSKL 346
N+YA RW DV VR+ M++ ++K G S +
Sbjct: 447 NLYAEEGRWQDVEKVRTLMKKNRLRKSTGQSTI 479
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 115/267 (43%), Gaps = 32/267 (11%)
Query: 56 ARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQ 115
A +F +V+ ++A+I Y G P ++L F M+S+ + DE+ L+ + S
Sbjct: 55 ANRVFSHIQNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSS 114
Query: 116 LGHLELAQWVDSYVSKSSI----------------------------DLQQDHVIAALLD 147
L L + V + ++ ++ + +V+ L
Sbjct: 115 LSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLM 174
Query: 148 MNAKC--GNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDE 205
+ C G+++R L LFK+M +R +VS+ SMI LS G +A+ LF M+ +G PDE
Sbjct: 175 IRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDE 234
Query: 206 VAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFA-CMVDLLSRSGHLGDAYELM 264
+L + G++D G + S + G+ +VD +SG L A +
Sbjct: 235 ATVVTVLPISASLGVLDTG-KWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIF 293
Query: 265 KSMHEPHAGAWGALLGACKLHGDSDLG 291
+ M + +W L+ ++G + G
Sbjct: 294 RKMQRRNVVSWNTLISGSAVNGKGEFG 320
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 242 bits (618), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 126/342 (36%), Positives = 200/342 (58%), Gaps = 6/342 (1%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLF 60
+ + ++ WN ++ G+ + D+ A +F +MPE+N S++T+I GY +G++ A+ LF
Sbjct: 191 IKKESILIWNVLINGYCRAKDMHMATTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQLF 250
Query: 61 EQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLE 120
E EK+VV+W+ LI+G+ Q G A+ + EM K +KP+E+ + +++SA S+ G L
Sbjct: 251 ELMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALG 310
Query: 121 LAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGL 180
+ Y+ + I L + + AL+DM AKCG +D A +F M +D++S+ +MIQG
Sbjct: 311 SGIRIHGYILDNGIKLDRA-IGTALVDMYAKCGELDCAATVFSNMNHKDILSWTAMIQGW 369
Query: 181 SIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPS 240
++HG A++ F M+ G PDEV F +LTAC +S VD G N+F SM+ Y I P+
Sbjct: 370 AVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPT 429
Query: 241 PDHFACMVDLLSRSGHLGDAYELMKSMH-EPHAGAWGALLGACKLHGDSDLGEIVANQLF 299
H+ +VDLL R+G L +A+EL+++M P W AL ACK H E V+ L
Sbjct: 430 LKHYVLVVDLLGRAGKLNEAHELVENMPINPDLTTWAALYRACKAHKGYRRAESVSQNLL 489
Query: 300 ELEPQNAANYILLSNIYAAAERWIDVSLVR----SRMRERSV 337
EL+P+ +YI L +A+ DV R R++ERS+
Sbjct: 490 ELDPELCGSYIFLDKTHASKGNIQDVEKRRLSLQKRIKERSL 531
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/327 (21%), Positives = 131/327 (40%), Gaps = 74/327 (22%)
Query: 26 RGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPN 85
RGV + +VS ++++ K+ D + + +F + E++ +ALI G +N +
Sbjct: 55 RGVLSSRVAAQLVSCSSLL----KSPDYSLS--IFRNSEERNPFVLNALIRGLTENARFE 108
Query: 86 QALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAAL 145
+++ F+ M VKPD ++ + S+LG L + + + K+ +D V +L
Sbjct: 109 SSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGFRWLGRALHAATLKNFVDCDS-FVRLSL 167
Query: 146 LDMNAKCGNMDRALKLFKE-----------------------------------MPKRDL 170
+DM AK G + A ++F+E MP+R+
Sbjct: 168 VDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGYCRAKDMHMATTLFRSMPERNS 227
Query: 171 VSYCSMIQG-------------------------------LSIHGCGEDAVRLFNSMLME 199
S+ ++I+G S G E A+ + ML +
Sbjct: 228 GSWSTLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLEK 287
Query: 200 GLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGD 259
GL P+E +L+ACS SG + G + GI +VD+ ++ G L
Sbjct: 288 GLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDN-GIKLDRAIGTALVDMYAKCGELDC 346
Query: 260 AYELMKSMHEPHAGAWGALLGACKLHG 286
A + +M+ +W A++ +HG
Sbjct: 347 AATVFSNMNHKDILSWTAMIQGWAVHG 373
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 242 bits (617), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 130/349 (37%), Positives = 214/349 (61%), Gaps = 15/349 (4%)
Query: 9 WNAMLCG-----FVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQA 63
W+ +C + D +SAR +FD MP KN+V++ +++D YAK+GD+ +AR +F++
Sbjct: 141 WDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEM 200
Query: 64 TEKDVVAWSALISGYVQNGQPNQALKVFLE-MESKNVKPDEFILVSLMSATSQLGHLELA 122
+E+DVV WS++I GYV+ G+ N+AL++F + M + K +E +VS++ A + LG L
Sbjct: 201 SERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRG 260
Query: 123 QWVDSYVSKSSIDLQQDHVI--AALLDMNAKCGNMDRALKLF--KEMPKRDLVSYCSMIQ 178
+ V Y+ + L VI +L+DM AKCG++ A +F + + D + + ++I
Sbjct: 261 KTVHRYILDVHLPLT---VILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIG 317
Query: 179 GLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGIS 238
GL+ HG ++++LF+ M + PDE+ F +L ACSH GLV E W++F+S+K+ G
Sbjct: 318 GLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSLKES-GAE 376
Query: 239 PSPDHFACMVDLLSRSGHLGDAYELMKSMH-EPHAGAWGALLGACKLHGDSDLGEIVANQ 297
P +H+ACMVD+LSR+G + DA++ + M +P GALL C HG+ +L E V +
Sbjct: 377 PKSEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGSMLGALLNGCINHGNLELAETVGKK 436
Query: 298 LFELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQKIPGCSKL 346
L EL+P N Y+ L+N+YA +++ +R M ++ V+KI G S L
Sbjct: 437 LIELQPHNDGRYVGLANVYAINKQFRAARSMREAMEKKGVKKIAGHSIL 485
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 128/286 (44%), Gaps = 34/286 (11%)
Query: 34 EKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLE 93
E+ VS T + +GD+ A + ++ W+ +I G+ + P +++ V+++
Sbjct: 39 EEPFVSQTLSFSALSSSGDVDYAYKFLSKLSDPPNYGWNFVIRGFSNSRNPEKSISVYIQ 98
Query: 94 MESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQ--------------QD 139
M + PD LM ++S+L + +L + V KS ++ +D
Sbjct: 99 MLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRD 158
Query: 140 HVIA----------------ALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIH 183
A ++LD AK G++ A +F EM +RD+V++ SMI G
Sbjct: 159 QASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKR 218
Query: 184 GCGEDAVRLFNSMLMEGLVP-DEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPD 242
G A+ +F+ M+ G +EV ++ AC+H G ++ G + + + + +
Sbjct: 219 GEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGKTVHRYILDVH-LPLTVI 277
Query: 243 HFACMVDLLSRSGHLGDAYELM--KSMHEPHAGAWGALLGACKLHG 286
++D+ ++ G +GDA+ + S+ E A W A++G HG
Sbjct: 278 LQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLASHG 323
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 241 bits (616), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 138/381 (36%), Positives = 206/381 (54%), Gaps = 41/381 (10%)
Query: 4 RNVASWNAMLCGFVKDGDLSSARGVFDAM------P------------------------ 33
RN +W+AM+ G+ ++G+ A +F M P
Sbjct: 285 RNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQL 344
Query: 34 ---------EKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQP 84
E+++ + T ++D YAKAG +A AR F+ E+DV W++LISGYVQN
Sbjct: 345 HSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDN 404
Query: 85 NQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAA 144
+AL ++ M++ + P++ + S++ A S L LEL + V + K L+ + +A
Sbjct: 405 EEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVP-IGSA 463
Query: 145 LLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPD 204
L M +KCG+++ +F+ P +D+VS+ +MI GLS +G G++A+ LF ML EG+ PD
Sbjct: 464 LSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPD 523
Query: 205 EVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELM 264
+V F I++ACSH G V+ GW YF M + G+ P DH+ACMVDLLSR+G L +A E +
Sbjct: 524 DVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFI 583
Query: 265 KSMHEPHA-GAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWI 323
+S + H W LL ACK HG +LG +L L + ++ Y+ LS IY A R
Sbjct: 584 ESANIDHGLCLWRILLSACKNHGKCELGVYAGEKLMALGSRESSTYVQLSGIYTALGRMR 643
Query: 324 DVSLVRSRMRERSVQKIPGCS 344
DV V MR V K GCS
Sbjct: 644 DVERVWKHMRANGVSKEVGCS 664
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/344 (24%), Positives = 159/344 (46%), Gaps = 53/344 (15%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDA-MPEKNVVS-----FTTMIDG-------- 46
MP+RN +W+ M+ G+ G + A VF+ + EK S FT ++
Sbjct: 179 MPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVG 238
Query: 47 ---------------------------YAKAGDMAAARFLFEQATEKDVVAWSALISGYV 79
Y+K + A +F+ + +++ + WSA+++GY
Sbjct: 239 LGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYS 298
Query: 80 QNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQD 139
QNG+ +A+K+F M S +KP E+ +V +++A S + +LE + + S++ K +
Sbjct: 299 QNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGF---ER 355
Query: 140 HVIA--ALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSML 197
H+ A AL+DM AK G + A K F + +RD+ + S+I G + E+A+ L+ M
Sbjct: 356 HLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMK 415
Query: 198 MEGLVPDEVAFTIILTACSHSGLVDEGWN-YFQSMKQKYGISPSPDHFACMVDLLSRSGH 256
G++P++ +L ACS ++ G + ++K +G+ + + + S+ G
Sbjct: 416 TAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIG--SALSTMYSKCGS 473
Query: 257 LGDAYELMKSMHEPHAGAWGALLGACKLHGDSDLGEIVANQLFE 300
L D + + +W A++ +G D A +LFE
Sbjct: 474 LEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGD----EALELFE 513
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/339 (23%), Positives = 155/339 (45%), Gaps = 46/339 (13%)
Query: 4 RNVASWNAMLCGFVKDGDLSSARGV---FDAMPEKNVV---------------------- 38
++V SWN+++ G+ ++G +SS+ V F M ++++
Sbjct: 78 KDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVG 137
Query: 39 -----------SF------TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQN 81
SF T+++ Y KAG + +F E++ WS ++SGY
Sbjct: 138 RQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATR 197
Query: 82 GQPNQALKVF-LEMESKNVKPD-EFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQD 139
G+ +A+KVF L + K D +++ +++S+ + ++ L + + K+ + L
Sbjct: 198 GRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGL-LGFV 256
Query: 140 HVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLME 199
+ AL+ M +KC +++ A K+F R+ +++ +M+ G S +G +AV+LF+ M
Sbjct: 257 ALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSA 316
Query: 200 GLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGD 259
G+ P E +L ACS ++EG S K G +VD+ +++G L D
Sbjct: 317 GIKPSEYTIVGVLNACSDICYLEEG-KQLHSFLLKLGFERHLFATTALVDMYAKAGCLAD 375
Query: 260 AYELMKSMHEPHAGAWGALLGACKLHGDSDLGEIVANQL 298
A + + E W +L+ + D++ I+ ++
Sbjct: 376 ARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRM 414
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 130/252 (51%), Gaps = 9/252 (3%)
Query: 43 MIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQA---LKVFLEMESKNV 99
+++ YAK G +A A +F KDVV+W++LI+GY QNG + + +++F EM ++++
Sbjct: 55 LVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDI 114
Query: 100 KPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRAL 159
P+ + L + A S L + + + V K S +V +L+ M K G ++ L
Sbjct: 115 LPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMS-SFGDIYVDTSLVGMYCKAGLVEDGL 173
Query: 160 KLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLM---EGLVPDEVAFTIILTACS 216
K+F MP+R+ ++ +M+ G + G E+A+++FN L EG D V FT +L++ +
Sbjct: 174 KVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYV-FTAVLSSLA 232
Query: 217 HSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWG 276
+ V G + K G+ +V + S+ L +A ++ S + ++ W
Sbjct: 233 ATIYVGLG-RQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWS 291
Query: 277 ALLGACKLHGDS 288
A++ +G+S
Sbjct: 292 AMVTGYSQNGES 303
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 241 bits (615), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 134/384 (34%), Positives = 205/384 (53%), Gaps = 41/384 (10%)
Query: 1 MPQRNVASWNAMLCGFVKD-----------------------------------GDLSSA 25
M +RNV SWN+M+ +V++ GDL
Sbjct: 297 MLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERG 356
Query: 26 RGVFDAMPE----KNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQN 81
R + E +NV ++I Y K ++ A +F + + +V+W+A+I G+ QN
Sbjct: 357 RFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQN 416
Query: 82 GQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHV 141
G+P AL F +M S+ VKPD F VS+++A ++L A+W+ V +S +D + V
Sbjct: 417 GRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLD-KNVFV 475
Query: 142 IAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGL 201
AL+DM AKCG + A +F M +R + ++ +MI G HG G+ A+ LF M +
Sbjct: 476 TTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTI 535
Query: 202 VPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAY 261
P+ V F +++ACSHSGLV+ G F MK+ Y I S DH+ MVDLL R+G L +A+
Sbjct: 536 KPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAW 595
Query: 262 ELMKSMH-EPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAE 320
+ + M +P +GA+LGAC++H + + E A +LFEL P + ++LL+NIY AA
Sbjct: 596 DFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAAS 655
Query: 321 RWIDVSLVRSRMRERSVQKIPGCS 344
W V VR M + ++K PGCS
Sbjct: 656 MWEKVGQVRVSMLRQGLRKTPGCS 679
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/328 (25%), Positives = 153/328 (46%), Gaps = 47/328 (14%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKN-------VVSF------------- 40
MP+R++ SWN ++ G+ ++G A + +M E+N +VS
Sbjct: 196 MPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVG 255
Query: 41 -------------------TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQN 81
T ++D YAK G + AR LF+ E++VV+W+++I YVQN
Sbjct: 256 KEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQN 315
Query: 82 GQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDH- 140
P +A+ +F +M + VKP + ++ + A + LG LE + ++ K S++L D
Sbjct: 316 ENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGR----FIHKLSVELGLDRN 371
Query: 141 --VIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLM 198
V+ +L+ M KC +D A +F ++ R LVS+ +MI G + +G DA+ F+ M
Sbjct: 372 VSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRS 431
Query: 199 EGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLG 258
+ PD + ++TA + + + + + + + +VD+ ++ G +
Sbjct: 432 RTVKPDTFTYVSVITAIAELSITHHA-KWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIM 490
Query: 259 DAYELMKSMHEPHAGAWGALLGACKLHG 286
A + M E H W A++ HG
Sbjct: 491 IARLIFDMMSERHVTTWNAMIDGYGTHG 518
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 130/244 (53%), Gaps = 2/244 (0%)
Query: 36 NVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEME 95
++ + T + + YAK + AR +F++ E+D+V+W+ +++GY QNG AL++ M
Sbjct: 169 DLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMC 228
Query: 96 SKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNM 155
+N+KP +VS++ A S L + + + + Y +S D ++ AL+DM AKCG++
Sbjct: 229 EENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFD-SLVNISTALVDMYAKCGSL 287
Query: 156 DRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTAC 215
+ A +LF M +R++VS+ SMI + ++A+ +F ML EG+ P +V+ L AC
Sbjct: 288 ETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHAC 347
Query: 216 SHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAW 275
+ G ++ G + + + G+ + ++ + + + A + + +W
Sbjct: 348 ADLGDLERG-RFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSW 406
Query: 276 GALL 279
A++
Sbjct: 407 NAMI 410
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 241 bits (615), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 121/306 (39%), Positives = 197/306 (64%), Gaps = 7/306 (2%)
Query: 43 MIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPD 102
+ID YAK G M A +FE+ +++D+V+W+++I+ Q+ P+ A+ +F +M + D
Sbjct: 482 VIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYD 541
Query: 103 EFILVSLMSATSQLGHLELAQWVDSYVSKSSI--DLQQDHVIAALLDMNAKCGNMDRALK 160
+ + +SA + L + + ++ K S+ D+ + + L+DM AKCGN+ A+
Sbjct: 542 CVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSE---STLIDMYAKCGNLKAAMN 598
Query: 161 LFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLME-GLVPDEVAFTIILTACSHSG 219
+FK M ++++VS+ S+I HG +D++ LF+ M+ + G+ PD++ F I+++C H G
Sbjct: 599 VFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVG 658
Query: 220 LVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSM-HEPHAGAWGAL 278
VDEG +F+SM + YGI P +H+AC+VDL R+G L +AYE +KSM P AG WG L
Sbjct: 659 DVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTL 718
Query: 279 LGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQ 338
LGAC+LH + +L E+ +++L +L+P N+ Y+L+SN +A A W V+ VRS M+ER VQ
Sbjct: 719 LGACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAHANAREWESVTKVRSLMKEREVQ 778
Query: 339 KIPGCS 344
KIPG S
Sbjct: 779 KIPGYS 784
Score = 122 bits (305), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 82/326 (25%), Positives = 156/326 (47%), Gaps = 43/326 (13%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNV----VSFTTM------------- 43
M + + +WN M+ G+V+ G + + F M V ++F+++
Sbjct: 300 MSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYC 359
Query: 44 ----------------------IDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQN 81
ID Y K ++ A+ +F Q DVV ++A+ISGY+ N
Sbjct: 360 KQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHN 419
Query: 82 GQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHV 141
G +L++F + + P+E LVS++ L L+L + + ++ K D + ++
Sbjct: 420 GLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFD-NRCNI 478
Query: 142 IAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGL 201
A++DM AKCG M+ A ++F+ + KRD+VS+ SMI + A+ +F M + G+
Sbjct: 479 GCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGI 538
Query: 202 VPDEVAFTIILTACSHSGLVDEGW-NYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDA 260
D V+ + L+AC++ L E + K+ ++ + ++D+ ++ G+L A
Sbjct: 539 CYDCVSISAALSACAN--LPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAA 596
Query: 261 YELMKSMHEPHAGAWGALLGACKLHG 286
+ K+M E + +W +++ AC HG
Sbjct: 597 MNVFKTMKEKNIVSWNSIIAACGNHG 622
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 133/319 (41%), Gaps = 41/319 (12%)
Query: 3 QRNVASWNAMLCGFVKDGDLSSARGVFDAMP----EKNVVSF------------------ 40
Q++ WN ML G+ K G L S F M N V+F
Sbjct: 201 QKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQ 260
Query: 41 -----------------TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQ 83
+++ Y+K G A LF + D V W+ +ISGYVQ+G
Sbjct: 261 LHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGL 320
Query: 84 PNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIA 143
++L F EM S V PD SL+ + S+ +LE + + Y+ + SI L + +
Sbjct: 321 MEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDI-FLTS 379
Query: 144 ALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVP 203
AL+D KC + A +F + D+V + +MI G +G D++ +F ++ + P
Sbjct: 380 ALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISP 439
Query: 204 DEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYEL 263
+E+ IL + G K G + ++D+ ++ G + AYE+
Sbjct: 440 NEITLVSILPVIGILLALKLGRE-LHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEI 498
Query: 264 MKSMHEPHAGAWGALLGAC 282
+ + + +W +++ C
Sbjct: 499 FERLSKRDIVSWNSMITRC 517
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 90/176 (51%), Gaps = 1/176 (0%)
Query: 41 TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVK 100
+++I Y + G + LF++ +KD V W+ +++GY + G + +K F M +
Sbjct: 177 SSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQIS 236
Query: 101 PDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALK 160
P+ ++S + ++L + V S +D + + +LL M +KCG D A K
Sbjct: 237 PNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGS-IKNSLLSMYSKCGRFDDASK 295
Query: 161 LFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACS 216
LF+ M + D V++ MI G G E+++ F M+ G++PD + F+ +L + S
Sbjct: 296 LFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVS 351
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 110/250 (44%), Gaps = 6/250 (2%)
Query: 30 DAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALK 89
D+ ++ ++ M ++ G M F + W+++IS +V+NG NQAL
Sbjct: 69 DSYTDERILGMYAMCGSFSDCGKM----FYRLDLRRSSIRPWNSIISSFVRNGLLNQALA 124
Query: 90 VFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMN 149
+ +M V PD L+ A L + + ++ VS +D + V ++L+
Sbjct: 125 FYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNE-FVASSLIKAY 183
Query: 150 AKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFT 209
+ G +D KLF + ++D V + M+ G + G + ++ F+ M M+ + P+ V F
Sbjct: 184 LEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFD 243
Query: 210 IILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHE 269
+L+ C+ L+D G + G+ ++ + S+ G DA +L + M
Sbjct: 244 CVLSVCASKLLIDLGVQ-LHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSR 302
Query: 270 PHAGAWGALL 279
W ++
Sbjct: 303 ADTVTWNCMI 312
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 76/133 (57%), Gaps = 3/133 (2%)
Query: 36 NVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEM- 94
+V S +T+ID YAK G++ AA +F+ EK++V+W+++I+ +G+ +L +F EM
Sbjct: 576 DVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMV 635
Query: 95 ESKNVKPDEFILVSLMSATSQLGHL-ELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCG 153
E ++PD+ + ++S+ +G + E ++ S I QQ+H A ++D+ + G
Sbjct: 636 EKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHY-ACVVDLFGRAG 694
Query: 154 NMDRALKLFKEMP 166
+ A + K MP
Sbjct: 695 RLTEAYETVKSMP 707
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 241 bits (614), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 128/339 (37%), Positives = 211/339 (62%), Gaps = 3/339 (0%)
Query: 10 NAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVV 69
NA++ ++K +A +FD M K VV++ +++ GY + G++ AA FE EK++V
Sbjct: 376 NALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIV 435
Query: 70 AWSALISGYVQNGQPNQALKVFLEMESKN-VKPDEFILVSLMSATSQLGHLELAQWVDSY 128
+W+ +ISG VQ +A++VF M+S+ V D ++S+ SA LG L+LA+W+ Y
Sbjct: 436 SWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYY 495
Query: 129 VSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGED 188
+ K+ I L + L+DM ++CG+ + A+ +F + RD+ ++ + I +++ G E
Sbjct: 496 IEKNGIQLDV-RLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAER 554
Query: 189 AVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMV 248
A+ LF+ M+ +GL PD VAF LTACSH GLV +G F SM + +G+SP H+ CMV
Sbjct: 555 AIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMV 614
Query: 249 DLLSRSGHLGDAYELMKSM-HEPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAA 307
DLL R+G L +A +L++ M EP+ W +LL AC++ G+ ++ A ++ L P+
Sbjct: 615 DLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTG 674
Query: 308 NYILLSNIYAAAERWIDVSLVRSRMRERSVQKIPGCSKL 346
+Y+LLSN+YA+A RW D++ VR M+E+ ++K PG S +
Sbjct: 675 SYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSI 713
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/348 (25%), Positives = 147/348 (42%), Gaps = 76/348 (21%)
Query: 1 MPQRNVASWNAMLCG-----FVKDG-------------------------------DLSS 24
M +RNV SW +M+CG F KD DL +
Sbjct: 195 MSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLET 254
Query: 25 ARGVF----DAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQ 80
V+ ++ E N + + ++D Y K + A+ LF++ ++ +A+ S YV+
Sbjct: 255 GEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVR 314
Query: 81 NGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDH 140
G +AL VF M V+PD ++S +S+ SQL ++ + YV ++ + D+
Sbjct: 315 QGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFE-SWDN 373
Query: 141 VIAALLDMNAKC-------------------------------GNMDRALKLFKEMPKRD 169
+ AL+DM KC G +D A + F+ MP+++
Sbjct: 374 ICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKN 433
Query: 170 LVSYCSMIQGLSIHGCGEDAVRLFNSML-MEGLVPDEVAFTIILTACSHSGLVD-EGWNY 227
+VS+ ++I GL E+A+ +F SM EG+ D V I +AC H G +D W Y
Sbjct: 434 IVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIY 493
Query: 228 FQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAW 275
+ +K GI +VD+ SR G A + S+ AW
Sbjct: 494 Y--YIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAW 539
Score = 97.8 bits (242), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 134/272 (49%), Gaps = 9/272 (3%)
Query: 35 KNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEM 94
K++ +++ YA+ G++ +AR +F++ +E++VV+W+++I GY + A+ +F M
Sbjct: 167 KDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRM 226
Query: 95 -ESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCG 153
+ V P+ +V ++SA ++L LE + V +++ S I++ D +++AL+DM KC
Sbjct: 227 VRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEV-NDLMVSALVDMYMKCN 285
Query: 154 NMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILT 213
+D A +LF E +L +M G +A+ +FN M+ G+ PD ++ ++
Sbjct: 286 AIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAIS 345
Query: 214 ACSHSGLVDEGW-NYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHA 272
+CS L + W + G + ++D+ + A+ + M
Sbjct: 346 SCSQ--LRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTV 403
Query: 273 GAWGALLGACKLHGDSDLGEIVANQLFELEPQ 304
W +++ +G+ D A + FE P+
Sbjct: 404 VTWNSIVAGYVENGEVD----AAWETFETMPE 431
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 99/195 (50%), Gaps = 5/195 (2%)
Query: 71 WSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVS 130
+++LI GY +G N+A+ +FL M + + PD++ +SA ++ + +
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161
Query: 131 KSSIDLQQD-HVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDA 189
K + +D V +L+ A+CG +D A K+F EM +R++VS+ SMI G + +DA
Sbjct: 162 K--MGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDA 219
Query: 190 VRLFNSMLM-EGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMV 248
V LF M+ E + P+ V +++AC+ ++ G + ++ GI + + +V
Sbjct: 220 VDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNS-GIEVNDLMVSALV 278
Query: 249 DLLSRSGHLGDAYEL 263
D+ + + A L
Sbjct: 279 DMYMKCNAIDVAKRL 293
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 125/283 (44%), Gaps = 45/283 (15%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMP--------------------------- 33
MP++N+ SWN ++ G V+ A VF +M
Sbjct: 429 MPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDL 488
Query: 34 --------EKNVVSF-----TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQ 80
EKN + TT++D +++ GD +A +F T +DV AW+A I
Sbjct: 489 AKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAM 548
Query: 81 NGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDH 140
G +A+++F +M + +KPD V ++A S G ++ + + + K +D
Sbjct: 549 AGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDV 608
Query: 141 VIAALLDMNAKCGNMDRALKLFKEMP-KRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLME 199
++D+ + G ++ A++L ++MP + + V + S++ + G E A + + ++
Sbjct: 609 HYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAA--YAAEKIQ 666
Query: 200 GLVPDEVAFTIILTAC-SHSGLVDEGWNYFQSMKQKYGISPSP 241
L P+ ++L+ + +G ++ SMK+K G+ P
Sbjct: 667 VLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEK-GLRKPP 708
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 241 bits (614), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 128/339 (37%), Positives = 211/339 (62%), Gaps = 3/339 (0%)
Query: 10 NAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVV 69
NA++ ++K +A +FD M K VV++ +++ GY + G++ AA FE EK++V
Sbjct: 376 NALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIV 435
Query: 70 AWSALISGYVQNGQPNQALKVFLEMESKN-VKPDEFILVSLMSATSQLGHLELAQWVDSY 128
+W+ +ISG VQ +A++VF M+S+ V D ++S+ SA LG L+LA+W+ Y
Sbjct: 436 SWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYY 495
Query: 129 VSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGED 188
+ K+ I L + L+DM ++CG+ + A+ +F + RD+ ++ + I +++ G E
Sbjct: 496 IEKNGIQLDV-RLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAER 554
Query: 189 AVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMV 248
A+ LF+ M+ +GL PD VAF LTACSH GLV +G F SM + +G+SP H+ CMV
Sbjct: 555 AIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMV 614
Query: 249 DLLSRSGHLGDAYELMKSM-HEPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAA 307
DLL R+G L +A +L++ M EP+ W +LL AC++ G+ ++ A ++ L P+
Sbjct: 615 DLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTG 674
Query: 308 NYILLSNIYAAAERWIDVSLVRSRMRERSVQKIPGCSKL 346
+Y+LLSN+YA+A RW D++ VR M+E+ ++K PG S +
Sbjct: 675 SYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSI 713
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/348 (25%), Positives = 147/348 (42%), Gaps = 76/348 (21%)
Query: 1 MPQRNVASWNAMLCG-----FVKDG-------------------------------DLSS 24
M +RNV SW +M+CG F KD DL +
Sbjct: 195 MSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLET 254
Query: 25 ARGVF----DAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQ 80
V+ ++ E N + + ++D Y K + A+ LF++ ++ +A+ S YV+
Sbjct: 255 GEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVR 314
Query: 81 NGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDH 140
G +AL VF M V+PD ++S +S+ SQL ++ + YV ++ + D+
Sbjct: 315 QGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFE-SWDN 373
Query: 141 VIAALLDMNAKC-------------------------------GNMDRALKLFKEMPKRD 169
+ AL+DM KC G +D A + F+ MP+++
Sbjct: 374 ICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKN 433
Query: 170 LVSYCSMIQGLSIHGCGEDAVRLFNSML-MEGLVPDEVAFTIILTACSHSGLVD-EGWNY 227
+VS+ ++I GL E+A+ +F SM EG+ D V I +AC H G +D W Y
Sbjct: 434 IVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIY 493
Query: 228 FQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAW 275
+ +K GI +VD+ SR G A + S+ AW
Sbjct: 494 Y--YIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAW 539
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 134/272 (49%), Gaps = 9/272 (3%)
Query: 35 KNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEM 94
K++ +++ YA+ G++ +AR +F++ +E++VV+W+++I GY + A+ +F M
Sbjct: 167 KDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRM 226
Query: 95 -ESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCG 153
+ V P+ +V ++SA ++L LE + V +++ S I++ D +++AL+DM KC
Sbjct: 227 VRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEV-NDLMVSALVDMYMKCN 285
Query: 154 NMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILT 213
+D A +LF E +L +M G +A+ +FN M+ G+ PD ++ ++
Sbjct: 286 AIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAIS 345
Query: 214 ACSHSGLVDEGW-NYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHA 272
+CS L + W + G + ++D+ + A+ + M
Sbjct: 346 SCSQ--LRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTV 403
Query: 273 GAWGALLGACKLHGDSDLGEIVANQLFELEPQ 304
W +++ +G+ D A + FE P+
Sbjct: 404 VTWNSIVAGYVENGEVD----AAWETFETMPE 431
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 117/237 (49%), Gaps = 9/237 (3%)
Query: 34 EKNVVSFTTMIDGYAKAG---DMAAARFLFEQA-TEKDVVAWSALISGYVQNGQPNQALK 89
+ +V + T ++ + G ++ A+ +FE + + +++LI GY +G N+A+
Sbjct: 61 DNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAIL 120
Query: 90 VFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQD-HVIAALLDM 148
+FL M + + PD++ +SA ++ + + K + +D V +L+
Sbjct: 121 LFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVK--MGYAKDLFVQNSLVHF 178
Query: 149 NAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLM-EGLVPDEVA 207
A+CG +D A K+F EM +R++VS+ SMI G + +DAV LF M+ E + P+ V
Sbjct: 179 YAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVT 238
Query: 208 FTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELM 264
+++AC+ ++ G + ++ GI + + +VD+ + + A L
Sbjct: 239 MVCVISACAKLEDLETGEKVYAFIRNS-GIEVNDLMVSALVDMYMKCNAIDVAKRLF 294
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 125/283 (44%), Gaps = 45/283 (15%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMP--------------------------- 33
MP++N+ SWN ++ G V+ A VF +M
Sbjct: 429 MPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDL 488
Query: 34 --------EKNVVSF-----TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQ 80
EKN + TT++D +++ GD +A +F T +DV AW+A I
Sbjct: 489 AKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAM 548
Query: 81 NGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDH 140
G +A+++F +M + +KPD V ++A S G ++ + + + K +D
Sbjct: 549 AGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDV 608
Query: 141 VIAALLDMNAKCGNMDRALKLFKEMP-KRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLME 199
++D+ + G ++ A++L ++MP + + V + S++ + G E A + + ++
Sbjct: 609 HYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAA--YAAEKIQ 666
Query: 200 GLVPDEVAFTIILTAC-SHSGLVDEGWNYFQSMKQKYGISPSP 241
L P+ ++L+ + +G ++ SMK+K G+ P
Sbjct: 667 VLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEK-GLRKPP 708
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 239 bits (610), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 124/302 (41%), Positives = 189/302 (62%), Gaps = 3/302 (0%)
Query: 47 YAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESK-NVKPDEFI 105
YAK G + +AR +F DV++W+ +ISGY QNG ++A++++ ME + + ++
Sbjct: 394 YAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGT 453
Query: 106 LVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEM 165
VS++ A SQ G L + + K+ + L V+ +L DM KCG ++ AL LF ++
Sbjct: 454 WVSVLPACSQAGALRQGMKLHGRLLKNGLYLDV-FVVTSLADMYGKCGRLEDALSLFYQI 512
Query: 166 PKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGW 225
P+ + V + ++I HG GE AV LF ML EG+ PD + F +L+ACSHSGLVDEG
Sbjct: 513 PRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQ 572
Query: 226 NYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMH-EPHAGAWGALLGACKL 284
F+ M+ YGI+PS H+ CMVD+ R+G L A + +KSM +P A WGALL AC++
Sbjct: 573 WCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRV 632
Query: 285 HGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQKIPGCS 344
HG+ DLG+I + LFE+EP++ ++LLSN+YA+A +W V +RS + ++K PG S
Sbjct: 633 HGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWS 692
Query: 345 KL 346
+
Sbjct: 693 SM 694
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 86/351 (24%), Positives = 162/351 (46%), Gaps = 39/351 (11%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGV---FDAMPEKNVVSFTT--------------- 42
MP R++ SWNAM+ G+ + G+ A + AM VVS +
Sbjct: 211 MPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIH 270
Query: 43 -----------------MIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPN 85
+ID YA+ G + + +F++ +D+++W+++I Y N QP
Sbjct: 271 SYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPL 330
Query: 86 QALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAAL 145
+A+ +F EM ++PD L+SL S SQLG + + V + + L+ + A+
Sbjct: 331 RAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAV 390
Query: 146 LDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEG-LVPD 204
+ M AK G +D A +F +P D++S+ ++I G + +G +A+ ++N M EG + +
Sbjct: 391 VVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAAN 450
Query: 205 EVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELM 264
+ + +L ACS +G + +G + K G+ + D+ + G L DA L
Sbjct: 451 QGTWVSVLPACSQAGALRQGMKLHGRL-LKNGLYLDVFVVTSLADMYGKCGRLEDALSLF 509
Query: 265 KSMHEPHAGAWGALLGACKLHGDSDLGEIVANQLFE--LEPQNAANYILLS 313
+ ++ W L+ HG + ++ ++ + ++P + LLS
Sbjct: 510 YQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLS 560
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 122/283 (43%), Gaps = 45/283 (15%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEK------------------------- 35
+P +V SWN ++ G+ ++G S A +++ M E+
Sbjct: 410 LPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQ 469
Query: 36 ---------------NVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQ 80
+V T++ D Y K G + A LF Q + V W+ LI+ +
Sbjct: 470 GMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGF 529
Query: 81 NGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQW-VDSYVSKSSIDLQQD 139
+G +A+ +F EM + VKPD V+L+SA S G ++ QW + + I
Sbjct: 530 HGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLK 589
Query: 140 HVIAALLDMNAKCGNMDRALKLFKEMP-KRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLM 198
H ++DM + G ++ ALK K M + D + +++ +HG D ++ + L
Sbjct: 590 HY-GCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHG-NVDLGKIASEHLF 647
Query: 199 EGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSP 241
E + P+ V + ++L+ S EG + +S+ G+ +P
Sbjct: 648 E-VEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTP 689
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 121/260 (46%), Gaps = 26/260 (10%)
Query: 35 KNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVF-LE 93
+NV +++ Y G++A AR F+ +DV AW+ +ISGY + G ++ ++ F L
Sbjct: 84 QNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLF 143
Query: 94 MESKNVKPDEFILVSLMSATSQL--GH------LELAQWVDSYVSKSSIDLQQDHVIAAL 145
M S + PD S++ A + G+ L+ D YV+ A+L
Sbjct: 144 MLSSGLTPDYRTFPSVLKACRTVIDGNKIHCLALKFGFMWDVYVA------------ASL 191
Query: 146 LDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDE 205
+ + ++ + A LF EMP RD+ S+ +MI G G ++A+ L N + D
Sbjct: 192 IHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGL----RAMDS 247
Query: 206 VAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMK 265
V +L+AC+ +G + G S K+G+ ++DL + G L D ++
Sbjct: 248 VTVVSLLSACTEAGDFNRGVT-IHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFD 306
Query: 266 SMHEPHAGAWGALLGACKLH 285
M+ +W +++ A +L+
Sbjct: 307 RMYVRDLISWNSIIKAYELN 326
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 122/311 (39%), Gaps = 82/311 (26%)
Query: 22 LSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQN 81
+ +AR +FD MP +++ S+ MI GY ++G+ A L N
Sbjct: 201 VGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTL--------------------SN 240
Query: 82 GQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHV 141
G M+S V VSL+SA ++ G + SY K ++ + V
Sbjct: 241 G--------LRAMDSVTV-------VSLLSACTEAGDFNRGVTIHSYSIKHGLE-SELFV 284
Query: 142 IAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGL 201
L+D+ A+ G + K+F M RDL+S+ S+I+ ++ A+ LF M + +
Sbjct: 285 SNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRI 344
Query: 202 VPDEVAFTIILTACSHSG-----------LVDEGW--------NYFQSMKQKYGIS---- 238
PD + + + S G + +GW N M K G+
Sbjct: 345 QPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSAR 404
Query: 239 ------PSPD--HFACMVDLLSRSGHLGDAYELMKSMHE-----PHAGAWGALLGAC--- 282
P+ D + ++ +++G +A E+ M E + G W ++L AC
Sbjct: 405 AVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQA 464
Query: 283 -------KLHG 286
KLHG
Sbjct: 465 GALRQGMKLHG 475
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 69/153 (45%), Gaps = 6/153 (3%)
Query: 133 SIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRL 192
S +Q + A L+++ GN+ A F + RD+ ++ MI G G + +R
Sbjct: 80 SKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRC 139
Query: 193 FN-SMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLL 251
F+ ML GL PD F +L AC V +G N + K+G A ++ L
Sbjct: 140 FSLFMLSSGLTPDYRTFPSVLKACR---TVIDG-NKIHCLALKFGFMWDVYVAASLIHLY 195
Query: 252 SRSGHLGDAYELMKSMHEPHAGAWGALL-GACK 283
SR +G+A L M G+W A++ G C+
Sbjct: 196 SRYKAVGNARILFDEMPVRDMGSWNAMISGYCQ 228
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 238 bits (608), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 134/390 (34%), Positives = 218/390 (55%), Gaps = 45/390 (11%)
Query: 1 MPQRNVASWNAMLCGFVKDGD--------------------------LSSARGVFDAMPE 34
M +R+V SWN M+ FV++G LS+A + +
Sbjct: 379 MRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIG 438
Query: 35 KNVVSF------------TTMIDGYAKAGDMAAARFLFEQA--TEKDVVAWSALISGYVQ 80
K +F + +ID Y+K+G + ++ LFE + E+D W+++ISGY Q
Sbjct: 439 KQTHAFLIRQGIQFEGMNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQ 498
Query: 81 NGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDH 140
NG + VF +M +N++P+ + S++ A SQ+G ++L + + + + +D Q
Sbjct: 499 NGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLD-QNVF 557
Query: 141 VIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEG 200
V +AL+DM +K G + A +F + +R+ V+Y +MI G HG GE A+ LF SM G
Sbjct: 558 VASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQESG 617
Query: 201 LVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDA 260
+ PD + F +L+ACS+SGL+DEG F+ M++ Y I PS +H+ C+ D+L R G + +A
Sbjct: 618 IKPDAITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQPSSEHYCCITDMLGRVGRVNEA 677
Query: 261 YELMKSMHEPH--AGAWGALLGACKLHGDSDLGEIVANQLFELEP-QNAANY-ILLSNIY 316
YE +K + E A WG+LLG+CKLHG+ +L E V+ +L + + +N + Y +LLSN+Y
Sbjct: 678 YEFVKGLGEEGNIAELWGSLLGSCKLHGELELAETVSERLAKFDKGKNFSGYEVLLSNMY 737
Query: 317 AAAERWIDVSLVRSRMRERSVQKIPGCSKL 346
A ++W V VR MRE+ ++K G S +
Sbjct: 738 AEEQKWKSVDKVRRGMREKGLKKEVGRSGI 767
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 135/265 (50%), Gaps = 18/265 (6%)
Query: 29 FDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQAL 88
F +P +V +++ Y++ G + + +F E+DVV+W+ +IS +VQNG ++ L
Sbjct: 348 FRELP---IVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGL 404
Query: 89 KVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDM 148
+ EM+ + K D + +L+SA S L + E+ + +++ + I Q + + + L+DM
Sbjct: 405 MLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGI--QFEGMNSYLIDM 462
Query: 149 NAKCGNMDRALKLFK--EMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEV 206
+K G + + KLF+ +RD ++ SMI G + +G E +F ML + + P+ V
Sbjct: 463 YSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAV 522
Query: 207 AFTIILTACSHSGLVD-----EGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAY 261
IL ACS G VD G++ Q + Q ++ + +VD+ S++G + A
Sbjct: 523 TVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVA------SALVDMYSKAGAIKYAE 576
Query: 262 ELMKSMHEPHAGAWGALLGACKLHG 286
++ E ++ + ++ HG
Sbjct: 577 DMFSQTKERNSVTYTTMILGYGQHG 601
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 92/369 (24%), Positives = 161/369 (43%), Gaps = 78/369 (21%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNV----VSF---------------- 40
M ++NV +WN ++ +VK G + A F M V VSF
Sbjct: 174 MRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKKA 233
Query: 41 ---------------------TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYV 79
++ I YA+ GD+ ++R +F+ E+++ W+ +I YV
Sbjct: 234 NVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYV 293
Query: 80 QNGQPNQALKVFLE-MESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQ 138
QN +++++FLE + SK + DE + SA S L +EL + +VSK+ +L
Sbjct: 294 QNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFREL-P 352
Query: 139 DHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLM 198
++ +L+ M ++CG++ ++ +F M +RD+VS+ +MI +G ++ + L M
Sbjct: 353 IVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQK 412
Query: 199 EGLVPDEVAFTIILTACSH----------------SGLVDEGWN-YFQSMKQKYG-ISPS 240
+G D + T +L+A S+ G+ EG N Y M K G I S
Sbjct: 413 QGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFEGMNSYLIDMYSKSGLIRIS 472
Query: 241 PDHFA-------------CMVDLLSRSGHLGDAYELMKSMHE----PHAGAWGALLGACK 283
F M+ +++GH + + + M E P+A ++L AC
Sbjct: 473 QKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACS 532
Query: 284 LHGDSDLGE 292
G DLG+
Sbjct: 533 QIGSVDLGK 541
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 132/268 (49%), Gaps = 7/268 (2%)
Query: 55 AARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATS 114
R +F+ K+VVAW+ LIS YV+ G+ +A + F M VKP V++ A S
Sbjct: 166 VVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVS 225
Query: 115 QLGHLELAQWVDSYVSKSSIDLQQD-HVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSY 173
++ A + K + +D V+++ + M A+ G+++ + ++F +R++ +
Sbjct: 226 ISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVW 285
Query: 174 CSMIQGLSIHGCGEDAVRLF-NSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMK 232
+MI + C +++ LF ++ + +V DEV + + +A S V+ G + +
Sbjct: 286 NTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVS 345
Query: 233 QKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHGDSDLGE 292
+ + P + MV + SR G + ++ + SM E +W ++ A +G D G
Sbjct: 346 KNFRELPIVIVNSLMV-MYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGL 404
Query: 293 IVANQLFELEPQN-AANYILLSNIYAAA 319
++ ++E++ Q +YI ++ + +AA
Sbjct: 405 ML---VYEMQKQGFKIDYITVTALLSAA 429
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 106/245 (43%), Gaps = 20/245 (8%)
Query: 51 GDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKP----DEFIL 106
G+ AR LF+ + V W+ +I G++ N P++AL + M K P D +
Sbjct: 53 GNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRM--KKTAPFTNCDAYTY 110
Query: 107 VSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIA--ALLDMNAKCGN------MDRA 158
S + A ++ +L+ + V ++ + LQ + +L++M C N D
Sbjct: 111 SSTLKACAETKNLKAGKAVHCHLIRC---LQNSSRVVHNSLMNMYVSCLNAPDCFEYDVV 167
Query: 159 LKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHS 218
K+F M ++++V++ ++I G +A R F M+ + P V+F + A S S
Sbjct: 168 RKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSIS 227
Query: 219 GLVDEGWNYFQSMKQKYGISPSPDHF--ACMVDLLSRSGHLGDAYELMKSMHEPHAGAWG 276
+ + N F + K G D F + + + + G + + + S E + W
Sbjct: 228 RSIKKA-NVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWN 286
Query: 277 ALLGA 281
++G
Sbjct: 287 TMIGV 291
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 238 bits (608), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 126/350 (36%), Positives = 213/350 (60%), Gaps = 10/350 (2%)
Query: 5 NVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQAT 64
+V NA++ + K G +S + +F+ + EK+VVS+T ++D K + R +F +
Sbjct: 145 SVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFHEMP 204
Query: 65 EKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFI-LVSLMSATSQLGHLELAQ 123
E++ VAW+ +++GY+ G + L++ EM + F+ L S++SA +Q G+L + +
Sbjct: 205 ERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNLVVGR 264
Query: 124 WVDSYVSKSSIDLQQD------HVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMI 177
WV Y K + + ++ V AL+DM AKCGN+D ++ +F+ M KR++V++ ++
Sbjct: 265 WVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLMRKRNVVTWNALF 324
Query: 178 QGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGI 237
GL++HG G + +F M+ E + PD++ FT +L+ACSHSG+VDEGW F S++ YG+
Sbjct: 325 SGLAMHGKGRMVIDMFPQMIRE-VKPDDLTFTAVLSACSHSGIVDEGWRCFHSLRF-YGL 382
Query: 238 SPSPDHFACMVDLLSRSGHLGDAYELMKSMH-EPHAGAWGALLGACKLHGDSDLGEIVAN 296
P DH+ACMVDLL R+G + +A LM+ M P+ G+LLG+C +HG ++ E +
Sbjct: 383 EPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGSLLGSCSVHGKVEIAERIKR 442
Query: 297 QLFELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQKIPGCSKL 346
+L ++ P N IL+SN+Y A R +R +R+R ++KIPG S +
Sbjct: 443 ELIQMSPGNTEYQILMSNMYVAEGRSDIADGLRGSLRKRGIRKIPGLSSI 492
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 139/308 (45%), Gaps = 42/308 (13%)
Query: 47 YAKAGDMAAARFLFEQA--TEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEF 104
YA +G+M A+ LF++ +EKD V W+ L+S + + G ++K+F+EM K V+ D+
Sbjct: 53 YASSGEMVTAQKLFDEIPLSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDV 112
Query: 105 ILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCG----------- 153
+V L ++L L AQ K + L V AL+DM KCG
Sbjct: 113 SVVCLFGVCAKLEDLGFAQQGHGVAVKMGV-LTSVKVCNALMDMYGKCGLVSEVKRIFEE 171
Query: 154 --------------------NMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLF 193
++R ++F EMP+R+ V++ M+ G G + + L
Sbjct: 172 LEEKSVVSWTVVLDTVVKWEGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELL 231
Query: 194 NSMLME-GLVPDEVAFTIILTACSHSG-LVDEGWNYFQSMKQK--YGISPSPDHF---AC 246
M+ G + V +L+AC+ SG LV W + ++K++ G S D
Sbjct: 232 AEMVFRCGHGLNFVTLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTA 291
Query: 247 MVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHGDSDLG-EIVANQLFELEPQN 305
+VD+ ++ G++ + + + M + + W AL +HG + ++ + E++P +
Sbjct: 292 LVDMYAKCGNIDSSMNVFRLMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQMIREVKPDD 351
Query: 306 AANYILLS 313
+LS
Sbjct: 352 LTFTAVLS 359
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 114/261 (43%), Gaps = 52/261 (19%)
Query: 1 MPQRNVASWNAMLCGFV------------------------------------KDGDLSS 24
MP+RN +W M+ G++ + G+L
Sbjct: 203 MPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNLVV 262
Query: 25 ARGVFDAMPEK-----------NVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSA 73
R V +K +V+ T ++D YAK G++ ++ +F +++VV W+A
Sbjct: 263 GRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLMRKRNVVTWNA 322
Query: 74 LISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSS 133
L SG +G+ + +F +M + VKPD+ +++SA S G ++ +
Sbjct: 323 LFSGLAMHGKGRMVIDMFPQM-IREVKPDDLTFTAVLSACSHSGIVDEGWRCFHSLRFYG 381
Query: 134 IDLQQDHVIAALLDMNAKCGNMDRALKLFKEMP-KRDLVSYCSMIQGLSIHGCGEDAVRL 192
++ + DH A ++D+ + G ++ A L +EMP + V S++ S+HG E A R+
Sbjct: 382 LEPKVDH-YACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGSLLGSCSVHGKVEIAERI 440
Query: 193 FNSMLMEGLVPDEVAFTIILT 213
++ + P + I+++
Sbjct: 441 KRELIQ--MSPGNTEYQILMS 459
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 238 bits (607), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 120/307 (39%), Positives = 184/307 (59%), Gaps = 5/307 (1%)
Query: 43 MIDGYAKAGDMAAARFLFEQAT--EKDVVAWSALISGYVQNGQPNQALKVFLEM--ESKN 98
+ID YAK + AR +F+ + E+DVV W+ +I GY Q+G N+AL++ EM E
Sbjct: 413 LIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQ 472
Query: 99 VKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRA 158
+P+ F + + A + L L + + + +Y ++ + V L+DM AKCG++ A
Sbjct: 473 TRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDA 532
Query: 159 LKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHS 218
+F M ++ V++ S++ G +HG GE+A+ +F+ M G D V ++L ACSHS
Sbjct: 533 RLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHS 592
Query: 219 GLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSM-HEPHAGAWGA 277
G++D+G YF MK +G+SP P+H+AC+VDLL R+G L A L++ M EP W A
Sbjct: 593 GMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVA 652
Query: 278 LLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSV 337
L C++HG +LGE A ++ EL + +Y LLSN+YA A RW DV+ +RS MR + V
Sbjct: 653 FLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGV 712
Query: 338 QKIPGCS 344
+K PGCS
Sbjct: 713 KKRPGCS 719
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 97/300 (32%), Positives = 152/300 (50%), Gaps = 20/300 (6%)
Query: 4 RNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQA 63
+N+ N ++ + K G + A VF M K+VVS+ M+ GY++ G A LFE+
Sbjct: 262 QNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKM 321
Query: 64 TEK----DVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHL 119
E+ DVV WSA ISGY Q G +AL V +M S +KP+E L+S++S + +G L
Sbjct: 322 QEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGAL 381
Query: 120 ELAQWVDSYVSKSSIDLQ------QDHVIAALLDMNAKCGNMDRALKLFKEM-PK-RDLV 171
+ + Y K IDL+ ++ VI L+DM AKC +D A +F + PK RD+V
Sbjct: 382 MHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVV 441
Query: 172 SYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTI--ILTACSHSGLVDEGWN-YF 228
++ MI G S HG A+ L + M E AFTI L AC+ + G +
Sbjct: 442 TWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHA 501
Query: 229 QSMKQKYGISPSPDHFA--CMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHG 286
+++ + P F C++D+ ++ G + DA + +M + W +L+ +HG
Sbjct: 502 YALRNQQNAVPL---FVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHG 558
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 143/323 (44%), Gaps = 47/323 (14%)
Query: 36 NVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEME 95
NV ++ Y++ ++ AR +F++ + DVV+W+++I Y + G+P AL++F M
Sbjct: 161 NVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMT 220
Query: 96 SK-NVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGN 154
++ +PD LV+++ + LG L + + + S + +Q V L+DM AKCG
Sbjct: 221 NEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEM-IQNMFVGNCLVDMYAKCGM 279
Query: 155 MDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLF--------------------- 193
MD A +F M +D+VS+ +M+ G S G EDAVRLF
Sbjct: 280 MDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISG 339
Query: 194 --------------NSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISP 239
ML G+ P+EV +L+ C+ G + G KY I
Sbjct: 340 YAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHG-KEIHCYAIKYPIDL 398
Query: 240 SPDHFA-------CMVDLLSRSGHLGDAYELMKSM--HEPHAGAWGALLGACKLHGDSDL 290
+ ++D+ ++ + A + S+ E W ++G HGD++
Sbjct: 399 RKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANK 458
Query: 291 GEIVANQLFELEPQNAANYILLS 313
+ +++FE + Q N +S
Sbjct: 459 ALELLSEMFEEDCQTRPNAFTIS 481
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 120/268 (44%), Gaps = 23/268 (8%)
Query: 43 MIDGYAKAGDMAAARFLFEQATEKD--VVAWSALISGYVQNGQPNQALKVFLEMESKNVK 100
+I Y G ++ A L + D V W++LI Y NG N+ L +F M S +
Sbjct: 65 LISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWT 124
Query: 101 PDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALK 160
PD + + A ++ + + + +S + + V AL+ M ++C ++ A K
Sbjct: 125 PDNYTFPFVFKACGEISSVRCGESAHA-LSLVTGFISNVFVGNALVAMYSRCRSLSDARK 183
Query: 161 LFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLME-GLVPDEVAFTIILTACSHSG 219
+F EM D+VS+ S+I+ + G + A+ +F+ M E G PD + +L C+ G
Sbjct: 184 VFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLG 243
Query: 220 LVDEGWNYFQSMKQKYGISPSPDHFA------CMVDLLSRSGHLGDAYELMKSMHEPHAG 273
G KQ + + + + C+VD+ ++ G + +A + +M
Sbjct: 244 THSLG-------KQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVV 296
Query: 274 AWGALLGACKLHGDSDLGEIV-ANQLFE 300
+W A++ G S +G A +LFE
Sbjct: 297 SWNAMVA-----GYSQIGRFEDAVRLFE 319
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 238 bits (607), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 117/331 (35%), Positives = 198/331 (59%), Gaps = 8/331 (2%)
Query: 22 LSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQN 81
++ AR +FD M E+NVVS+T M+ GYA++GD++ A LFE E+DV +W+A+++ QN
Sbjct: 178 ITLARQLFDEMSERNVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQN 237
Query: 82 GQPNQALKVFLEM-ESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDH 140
G +A+ +F M +++P+E +V ++SA +Q G L+LA+ + ++ + DL D
Sbjct: 238 GLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRR--DLSSDV 295
Query: 141 VIA-ALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSML-- 197
++ +L+D+ KCGN++ A +FK K+ L ++ SMI ++HG E+A+ +F M+
Sbjct: 296 FVSNSLVDLYGKCGNLEEASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKL 355
Query: 198 -MEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGH 256
+ + PD + F +L AC+H GLV +G YF M ++GI P +H+ C++DLL R+G
Sbjct: 356 NINDIKPDHITFIGLLNACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGR 415
Query: 257 LGDAYELMKSMH-EPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNI 315
+A E+M +M + WG+LL ACK+HG DL E+ L L P N +++N+
Sbjct: 416 FDEALEVMSTMKMKADEAIWGSLLNACKIHGHLDLAEVAVKNLVALNPNNGGYVAMMANL 475
Query: 316 YAAAERWIDVSLVRSRMRERSVQKIPGCSKL 346
Y W + R ++ ++ K PG S++
Sbjct: 476 YGEMGNWEEARRARKMIKHQNAYKPPGWSRI 506
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 103/229 (44%), Gaps = 46/229 (20%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPE-------------------------- 34
MP+R+V SWNA+L ++G A +F M
Sbjct: 219 MPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQL 278
Query: 35 -KNVVSF-------------TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQ 80
K + +F +++D Y K G++ A +F+ A++K + AW+++I+ +
Sbjct: 279 AKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASKKSLTAWNSMINCFAL 338
Query: 81 NGQPNQALKVFLEMESKN---VKPDEFILVSLMSATSQLGHLELAQ-WVDSYVSKSSIDL 136
+G+ +A+ VF EM N +KPD + L++A + G + + + D ++ I+
Sbjct: 339 HGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGRGYFDLMTNRFGIEP 398
Query: 137 QQDHVIAALLDMNAKCGNMDRALKLFKEMP-KRDLVSYCSMIQGLSIHG 184
+ +H L+D+ + G D AL++ M K D + S++ IHG
Sbjct: 399 RIEHY-GCLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSLLNACKIHG 446
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 238 bits (607), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 125/387 (32%), Positives = 211/387 (54%), Gaps = 41/387 (10%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVS--------------------- 39
+P ++V SWNAM+ G+ + G+ A +F M + NV
Sbjct: 226 IPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELG 285
Query: 40 ------------------FTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQN 81
+ID Y+K G++ A LFE+ KDV++W+ LI GY
Sbjct: 286 RQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHM 345
Query: 82 GQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHV 141
+AL +F EM P++ ++S++ A + LG +++ +W+ Y+ K +
Sbjct: 346 NLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASS 405
Query: 142 I-AALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEG 200
+ +L+DM AKCG+++ A ++F + + L S+ +MI G ++HG + + LF+ M G
Sbjct: 406 LRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIG 465
Query: 201 LVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLG-D 259
+ PD++ F +L+ACSHSG++D G + F++M Q Y ++P +H+ CM+DLL SG
Sbjct: 466 IQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEA 525
Query: 260 AYELMKSMHEPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAA 319
+ EP W +LL ACK+HG+ +LGE A L ++EP+N +Y+LLSNIYA+A
Sbjct: 526 EEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASA 585
Query: 320 ERWIDVSLVRSRMRERSVQKIPGCSKL 346
RW +V+ R+ + ++ ++K+PGCS +
Sbjct: 586 GRWNEVAKTRALLNDKGMKKVPGCSSI 612
Score = 179 bits (453), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 92/285 (32%), Positives = 169/285 (59%), Gaps = 10/285 (3%)
Query: 10 NAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVV 69
+++ +V++G L A VFD P ++VVS+T +I GYA G + A+ LF++ KDVV
Sbjct: 173 TSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVV 232
Query: 70 AWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQ----WV 125
+W+A+ISGY + G +AL++F +M NV+PDE +V+++SA +Q G +EL + W+
Sbjct: 233 SWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWI 292
Query: 126 DSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGC 185
D + S++ ++ AL+D+ +KCG ++ A LF+ +P +D++S+ ++I G +
Sbjct: 293 DDHGFGSNLK-----IVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNL 347
Query: 186 GEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEG-WNYFQSMKQKYGISPSPDHF 244
++A+ LF ML G P++V IL AC+H G +D G W + K+ G++ +
Sbjct: 348 YKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLR 407
Query: 245 ACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHGDSD 289
++D+ ++ G + A+++ S+ +W A++ +HG +D
Sbjct: 408 TSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRAD 452
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 115/254 (45%), Gaps = 33/254 (12%)
Query: 59 LFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGH 118
+F+ E +++ W+ + G+ + P ALK+++ M S + P+ + ++ + ++
Sbjct: 90 VFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKA 149
Query: 119 LELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQ 178
+ Q + +V K DL +V +L+ M + G ++ A K+F + P RD+VSY ++I+
Sbjct: 150 FKEGQQIHGHVLKLGCDLDL-YVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIK 208
Query: 179 GLSIHGCGEDAVRLFNSMLMEGLV-------------------------------PDEVA 207
G + G E+A +LF+ + ++ +V PDE
Sbjct: 209 GYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDEST 268
Query: 208 FTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSM 267
+++AC+ SG ++ G + +G + ++DL S+ G L A L + +
Sbjct: 269 MVTVVSACAQSGSIELGRQVHLWI-DDHGFGSNLKIVNALIDLYSKCGELETACGLFERL 327
Query: 268 HEPHAGAWGALLGA 281
+W L+G
Sbjct: 328 PYKDVISWNTLIGG 341
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 238 bits (607), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 130/382 (34%), Positives = 214/382 (56%), Gaps = 42/382 (10%)
Query: 4 RNVASWNAMLCGFVKDGDLSSARGVFDAMP-------EKNVVSF---------------- 40
++V +W AM+ GFV++G S A F M E VVS
Sbjct: 167 KDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSV 226
Query: 41 -----------------TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQ 83
++++D Y K A+ +F++ ++VV W+ALI+GYVQ+
Sbjct: 227 HGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRC 286
Query: 84 PNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIA 143
++ + VF EM +V P+E L S++SA + +G L + V Y+ K+SI++
Sbjct: 287 FDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTT-AGT 345
Query: 144 ALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVP 203
L+D+ KCG ++ A+ +F+ + ++++ ++ +MI G + HG DA LF +ML + P
Sbjct: 346 TLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSP 405
Query: 204 DEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYEL 263
+EV F +L+AC+H GLV+EG F SMK ++ + P DH+ACMVDL R G L +A L
Sbjct: 406 NEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKAL 465
Query: 264 MKSM-HEPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERW 322
++ M EP WGAL G+C LH D +LG+ A+++ +L+P ++ Y LL+N+Y+ ++ W
Sbjct: 466 IERMPMEPTNVVWGALFGSCLLHKDYELGKYAASRVIKLQPSHSGRYTLLANLYSESQNW 525
Query: 323 IDVSLVRSRMRERSVQKIPGCS 344
+V+ VR +M+++ V K PG S
Sbjct: 526 DEVARVRKQMKDQQVVKSPGFS 547
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 128/245 (52%), Gaps = 1/245 (0%)
Query: 42 TMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKP 101
++I GY+ +G A LF+ A +KDVV W+A+I G+V+NG ++A+ F+EM+ V
Sbjct: 143 SLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAA 202
Query: 102 DEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKL 161
+E +VS++ A ++ + + V ++ + ++L+DM KC D A K+
Sbjct: 203 NEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKV 262
Query: 162 FKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLV 221
F EMP R++V++ ++I G C + + +F ML + P+E + +L+AC+H G +
Sbjct: 263 FDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGAL 322
Query: 222 DEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGA 281
G M K I + ++DL + G L +A + + +HE + W A++
Sbjct: 323 HRGRRVHCYM-IKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMING 381
Query: 282 CKLHG 286
HG
Sbjct: 382 FAAHG 386
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 93/206 (45%), Gaps = 41/206 (19%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAM---------------------------- 32
MP RNV +W A++ G+V+ VF+ M
Sbjct: 266 MPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRG 325
Query: 33 -----------PEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQN 81
E N + TT+ID Y K G + A +FE+ EK+V W+A+I+G+ +
Sbjct: 326 RRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAH 385
Query: 82 GQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVD-SYVSKSSIDLQQDH 140
G A +F M S +V P+E ++++SA + G +E + + S + +++ + DH
Sbjct: 386 GYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADH 445
Query: 141 VIAALLDMNAKCGNMDRALKLFKEMP 166
A ++D+ + G ++ A L + MP
Sbjct: 446 -YACMVDLFGRKGLLEEAKALIERMP 470
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 237 bits (604), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 122/304 (40%), Positives = 192/304 (63%), Gaps = 4/304 (1%)
Query: 43 MIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPD 102
++D Y K GDM+AA+F F+ D VAW+ +ISG ++NG+ +A VF +M V PD
Sbjct: 558 ILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPD 617
Query: 103 EFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVI-AALLDMNAKCGNMDRALKL 161
EF + +L A+S L LE + + + K ++ D + +L+DM AKCG++D A L
Sbjct: 618 EFTIATLAKASSCLTALEQGRQIHANALK--LNCTNDPFVGTSLVDMYAKCGSIDDAYCL 675
Query: 162 FKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLV 221
FK + ++ ++ +M+ GL+ HG G++ ++LF M G+ PD+V F +L+ACSHSGLV
Sbjct: 676 FKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLV 735
Query: 222 DEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMH-EPHAGAWGALLG 280
E + + +SM YGI P +H++C+ D L R+G + A L++SM E A + LL
Sbjct: 736 SEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLA 795
Query: 281 ACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQKI 340
AC++ GD++ G+ VA +L ELEP +++ Y+LLSN+YAAA +W ++ L R+ M+ V+K
Sbjct: 796 ACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKD 855
Query: 341 PGCS 344
PG S
Sbjct: 856 PGFS 859
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 89/327 (27%), Positives = 150/327 (45%), Gaps = 43/327 (13%)
Query: 1 MPQRNVASWNAMLCGFVKDG----------------------DLSSARGVFDAMPE---- 34
M +R++ SWN+++ G ++G ++S ++PE
Sbjct: 376 MSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSL 435
Query: 35 -----------KNVV-SF--TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQ 80
NV SF T +ID Y++ M A LFE+ D+VAW+A+++GY Q
Sbjct: 436 SKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFERHN-FDLVAWNAMMAGYTQ 494
Query: 81 NGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDH 140
+ ++ LK+F M + + D+F L ++ L + + V +Y KS DL
Sbjct: 495 SHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDL-W 553
Query: 141 VIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEG 200
V + +LDM KCG+M A F +P D V++ +MI G +G E A +F+ M + G
Sbjct: 554 VSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMG 613
Query: 201 LVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDA 260
++PDE + A S +++G + K + P +VD+ ++ G + DA
Sbjct: 614 VLPDEFTIATLAKASSCLTALEQG-RQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDA 672
Query: 261 YELMKSMHEPHAGAWGALLGACKLHGD 287
Y L K + + AW A+L HG+
Sbjct: 673 YCLFKRIEMMNITAWNAMLVGLAQHGE 699
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 138/291 (47%), Gaps = 17/291 (5%)
Query: 1 MPQRNVASWNAMLCGFVKDG------DLSSARGVFDAMPEKNVVSFTTMIDG-YAKAGDM 53
MP R+V WN ML +++ G DLSSA P + + I G + AG +
Sbjct: 206 MPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLARISGDDSDAGQV 265
Query: 54 AAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSAT 113
+ + ++ +++ + +S Y+ +GQ + LK F +M +V+ D+ + +++
Sbjct: 266 KSFANGNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATA 325
Query: 114 SQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSY 173
++ L L Q V K +DL V +L++M K A +F M +RDL+S+
Sbjct: 326 VKVDSLALGQQVHCMALKLGLDLMLT-VSNSLINMYCKLRKFGFARTVFDNMSERDLISW 384
Query: 174 CSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSH--SGLVDEGWNYFQSM 231
S+I G++ +G +AV LF +L GL PD+ T +L A S GL + ++
Sbjct: 385 NSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAI 444
Query: 232 KQKYGISPSPDHF--ACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLG 280
K I+ D F ++D SR+ + +A E++ H AW A++
Sbjct: 445 K----INNVSDSFVSTALIDAYSRNRCMKEA-EILFERHNFDLVAWNAMMA 490
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 125/262 (47%), Gaps = 12/262 (4%)
Query: 42 TMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKP 101
++I+ Y K AR +F+ +E+D+++W+++I+G QNG +A+ +F+++ +KP
Sbjct: 355 SLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKP 414
Query: 102 DEFILVSLMSATSQLGH-LELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALK 160
D++ + S++ A S L L L++ V + K + ++ V AL+D ++ M A
Sbjct: 415 DQYTMTSVLKAASSLPEGLSLSKQVHVHAIKIN-NVSDSFVSTALIDAYSRNRCMKEAEI 473
Query: 161 LFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGL 220
LF E DLV++ +M+ G + G ++LF M +G D+ + C
Sbjct: 474 LF-ERHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFA 532
Query: 221 VDEGWNYFQSMKQKYGISPSPDH----FACMVDLLSRSGHLGDAYELMKSMHEPHAGAWG 276
+++G Y I D + ++D+ + G + A S+ P AW
Sbjct: 533 INQG-----KQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWT 587
Query: 277 ALLGACKLHGDSDLGEIVANQL 298
++ C +G+ + V +Q+
Sbjct: 588 TMISGCIENGEEERAFHVFSQM 609
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 100/198 (50%), Gaps = 9/198 (4%)
Query: 20 GDLSSARGV-FDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGY 78
G + AR + F+ PE+ +++ +I Y+K G + AR +F++ ++D+V+W+++++ Y
Sbjct: 58 GKCTHARILTFEENPERFLIN--NLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAY 115
Query: 79 VQNGQ-----PNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSS 133
Q+ + QA +F + V L ++ G++ ++ Y K
Sbjct: 116 AQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIG 175
Query: 134 IDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLF 193
+D + V AL+++ K G + LF+EMP RD+V + M++ G E+A+ L
Sbjct: 176 LD-GDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLS 234
Query: 194 NSMLMEGLVPDEVAFTII 211
++ GL P+E+ ++
Sbjct: 235 SAFHSSGLNPNEITLRLL 252
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 81/159 (50%), Gaps = 3/159 (1%)
Query: 41 TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVK 100
T+++D YAK G + A LF++ ++ AW+A++ G Q+G+ + L++F +M+S +K
Sbjct: 657 TSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIK 716
Query: 101 PDEFILVSLMSATSQLGHL-ELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRAL 159
PD+ + ++SA S G + E + + S I + +H + L D + G + +A
Sbjct: 717 PDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHY-SCLADALGRAGLVKQAE 775
Query: 160 KLFKEMPKRDLVS-YCSMIQGLSIHGCGEDAVRLFNSML 197
L + M S Y +++ + G E R+ +L
Sbjct: 776 NLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLL 814
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 237 bits (604), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 114/339 (33%), Positives = 202/339 (59%), Gaps = 4/339 (1%)
Query: 10 NAMLCGFVKDGDLSSARGVFDAMPEK-NVVSFTTMIDGYAKAGDMAAARFLFEQATEKDV 68
NA+L + K G++ A +F + E+ +VS+ +++ GY +G A+ LF + + D+
Sbjct: 474 NALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDL 533
Query: 69 VAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSY 128
WS ++ Y ++ PN+A+ VF E++++ ++P+ +++L+ +QL L L + Y
Sbjct: 534 TTWSLMVRIYAESCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGY 593
Query: 129 VSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGED 188
+ + L + LLD+ AKCG++ A +F+ +RDLV + +M+ G ++HG G++
Sbjct: 594 IIRGG--LGDIRLKGTLLDVYAKCGSLKHAYSVFQSDARRDLVMFTAMVAGYAVHGRGKE 651
Query: 189 AVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMV 248
A+ +++ M + PD V T +LTAC H+GL+ +G + S++ +G+ P+ + +AC V
Sbjct: 652 ALMIYSHMTESNIKPDHVFITTMLTACCHAGLIQDGLQIYDSIRTVHGMKPTMEQYACAV 711
Query: 249 DLLSRSGHLGDAYELMKSMH-EPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAA 307
DL++R G L DAY + M EP+A WG LL AC + DLG VAN L + E +
Sbjct: 712 DLIARGGRLDDAYSFVTQMPVEPNANIWGTLLRACTTYNRMDLGHSVANHLLQAESDDTG 771
Query: 308 NYILLSNIYAAAERWIDVSLVRSRMRERSVQKIPGCSKL 346
N++L+SN+YAA +W V +R+ M+++ ++K GCS L
Sbjct: 772 NHVLISNMYAADAKWEGVMELRNLMKKKEMKKPAGCSWL 810
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 103/201 (51%), Gaps = 8/201 (3%)
Query: 43 MIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPD 102
+I YA+ GD +AA + F + KD+++W+A++ + + + Q L + + ++ + D
Sbjct: 372 LISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLNLLHHLLNEAITLD 431
Query: 103 EFILVSLMSATSQLGHLELAQWVDSYVSKSSI--DLQQDHVIAALLDMNAKCGNMDRALK 160
++SL+ + + + V Y K+ + D ++ + ALLD AKCGN++ A K
Sbjct: 432 SVTILSLLKFCINVQGIGKVKEVHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHK 491
Query: 161 LFKEMP-KRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSG 219
+F + +R LVSY S++ G G +DA LF M D +++++ + S
Sbjct: 492 IFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEM----STTDLTTWSLMVRIYAESC 547
Query: 220 LVDEGWNYFQSMKQKYGISPS 240
+E F+ ++ + G+ P+
Sbjct: 548 CPNEAIGVFREIQAR-GMRPN 567
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 78/149 (52%), Gaps = 1/149 (0%)
Query: 34 EKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLE 93
+ +V +++ Y + G + A LF + KD+V+W+ +I+GY N + +A ++F
Sbjct: 260 QTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHN 319
Query: 94 MESK-NVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKC 152
+ K +V PD ++S++ +QL L + + SY+ + S L+ V AL+ A+
Sbjct: 320 LVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARF 379
Query: 153 GNMDRALKLFKEMPKRDLVSYCSMIQGLS 181
G+ A F M +D++S+ +++ +
Sbjct: 380 GDTSAAYWAFSLMSTKDIISWNAILDAFA 408
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 113/259 (43%), Gaps = 5/259 (1%)
Query: 28 VFDAMPEKNVVSFTTMIDGYAKAGDMAA-ARFLFEQATEKDVVAWSALISGYVQNGQPNQ 86
+ A EK+ + ++ YAK G + A F+ +KDVV+W+A+I+G+ +N
Sbjct: 148 IIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAGFSENNMMAD 207
Query: 87 ALKVFLEMESKNVKPDEFILVSLMSATSQLGH---LELAQWVDSYVSKSSIDLQQDHVIA 143
A + F M + +P+ + +++ + + + + SYV + S V
Sbjct: 208 AFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSWLQTHVFVCN 267
Query: 144 ALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLV- 202
+L+ + G ++ A LF M +DLVS+ +I G + + A +LF++++ +G V
Sbjct: 268 SLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVS 327
Query: 203 PDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYE 262
PD V IL C+ + G + + + ++ +R G AY
Sbjct: 328 PDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAAYW 387
Query: 263 LMKSMHEPHAGAWGALLGA 281
M +W A+L A
Sbjct: 388 AFSLMSTKDIISWNAILDA 406
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 78/177 (44%), Gaps = 6/177 (3%)
Query: 141 VIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSM-LME 199
V ++L+M AKC MD K+F++M D V + ++ GLS+ CG + +R F +M +
Sbjct: 58 VSKSVLNMYAKCRRMDDCQKMFRQMDSLDPVVWNIVLTGLSV-SCGRETMRFFKAMHFAD 116
Query: 200 GLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHL-G 258
P V F I+L C G G S K G+ +V + ++ G +
Sbjct: 117 EPKPSSVTFAIVLPLCVRLGDSYNG-KSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFP 175
Query: 259 DAYELMKSMHEPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNI 315
DAY + + +W A++ ++ + + + L+ NY ++N+
Sbjct: 176 DAYTAFDGIADKDVVSWNAIIAG--FSENNMMADAFRSFCLMLKEPTEPNYATIANV 230
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 107/260 (41%), Gaps = 37/260 (14%)
Query: 42 TMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGY-VQNGQPNQALKVFLEME-SKNV 99
++++ YAK M + +F Q D V W+ +++G V G+ + ++ F M +
Sbjct: 61 SVLNMYAKCRRMDDCQKMFRQMDSLDPVVWNIVLTGLSVSCGR--ETMRFFKAMHFADEP 118
Query: 100 KPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIA-ALLDMNAKCGNM-DR 157
KP ++ +LG + + SY+ K+ L++D ++ AL+ M AK G +
Sbjct: 119 KPSSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAG--LEKDTLVGNALVSMYAKFGFIFPD 176
Query: 158 ALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACS- 216
A F + +D+VS+ ++I G S + DA R F ML E P+ +L C+
Sbjct: 177 AYTAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCAS 236
Query: 217 -------------HSGLVDEGWNYFQSMKQKYGISPSPDHFAC--MVDLLSRSGHLGDAY 261
HS +V W Q+ F C +V R G + +A
Sbjct: 237 MDKNIACRSGRQIHSYVVQRSW--LQTHV-----------FVCNSLVSFYLRVGRIEEAA 283
Query: 262 ELMKSMHEPHAGAWGALLGA 281
L M +W ++
Sbjct: 284 SLFTRMGSKDLVSWNVVIAG 303
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 236 bits (602), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 114/303 (37%), Positives = 189/303 (62%), Gaps = 2/303 (0%)
Query: 43 MIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPD 102
++ Y++ G + + FEQ D +AW+AL+SG+ Q+G +AL+VF+ M + + +
Sbjct: 632 LVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNN 691
Query: 103 EFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLF 162
F S + A S+ +++ + V + ++K+ D + V AL+ M AKCG++ A K F
Sbjct: 692 NFTFGSAVKAASETANMKQGKQVHAVITKTGYD-SETEVCNALISMYAKCGSISDAEKQF 750
Query: 163 KEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVD 222
E+ ++ VS+ ++I S HG G +A+ F+ M+ + P+ V +L+ACSH GLVD
Sbjct: 751 LEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVD 810
Query: 223 EGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMH-EPHAGAWGALLGA 281
+G YF+SM +YG+SP P+H+ C+VD+L+R+G L A E ++ M +P A W LL A
Sbjct: 811 KGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSA 870
Query: 282 CKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQKIP 341
C +H + ++GE A+ L ELEP+++A Y+LLSN+YA +++W L R +M+E+ V+K P
Sbjct: 871 CVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEP 930
Query: 342 GCS 344
G S
Sbjct: 931 GQS 933
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 85/347 (24%), Positives = 144/347 (41%), Gaps = 52/347 (14%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNV------------------VSF-- 40
MP+R + +WN M+ + G+F M +NV V+F
Sbjct: 146 MPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDV 205
Query: 41 --------------------TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQ 80
+ID Y++ G + AR +F+ KD +W A+ISG +
Sbjct: 206 VEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSK 265
Query: 81 NGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDH 140
N +A+++F +M + P + S++SA ++ LE+ + + V K +
Sbjct: 266 NECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFS-SDTY 324
Query: 141 VIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEG 200
V AL+ + GN+ A +F M +RD V+Y ++I GLS G GE A+ LF M ++G
Sbjct: 325 VCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDG 384
Query: 201 LVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDA 260
L PD ++ ACS G + G + K G + + +++L ++ + A
Sbjct: 385 LEPDSNTLASLVVACSADGTLFRG-QQLHAYTTKLGFASNNKIEGALLNLYAKCADIETA 443
Query: 261 YELMKSMHEPHAGAWGALLGACKLHGD----------SDLGEIVANQ 297
+ + W +L A L D + EIV NQ
Sbjct: 444 LDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQ 490
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 120/247 (48%), Gaps = 2/247 (0%)
Query: 43 MIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPD 102
+++ YAK D+ A F + ++VV W+ ++ Y + ++F +M+ + + P+
Sbjct: 430 LLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPN 489
Query: 103 EFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLF 162
++ S++ +LG LEL + + S + K++ L +V + L+DM AK G +D A +
Sbjct: 490 QYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNA-YVCSVLIDMYAKLGKLDTAWDIL 548
Query: 163 KEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVD 222
+D+VS+ +MI G + + + A+ F ML G+ DEV T ++AC+ +
Sbjct: 549 IRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALK 608
Query: 223 EGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGAC 282
EG + G S +V L SR G + ++Y + AW AL+
Sbjct: 609 EG-QQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGF 667
Query: 283 KLHGDSD 289
+ G+++
Sbjct: 668 QQSGNNE 674
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 138/288 (47%), Gaps = 10/288 (3%)
Query: 5 NVASWNAMLCGFVKDGDLSSARGVFDAMPEKN----VVSFTTMIDGYAKAGDMAAARFLF 60
N ++ ++L ++ GDL + + + N + +ID YAK G + A +
Sbjct: 489 NQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDIL 548
Query: 61 EQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLE 120
+ KDVV+W+ +I+GY Q ++AL F +M + ++ DE L + +SA + L L+
Sbjct: 549 IRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALK 608
Query: 121 LAQWVDSY--VSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQ 178
Q + + VS S DL + AL+ + ++CG ++ + F++ D +++ +++
Sbjct: 609 EGQQIHAQACVSGFSSDLPFQN---ALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVS 665
Query: 179 GLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGIS 238
G G E+A+R+F M EG+ + F + A S + + +G ++ K G
Sbjct: 666 GFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQG-KQVHAVITKTGYD 724
Query: 239 PSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHG 286
+ ++ + ++ G + DA + + + +W A++ A HG
Sbjct: 725 SETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHG 772
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 119/242 (49%), Gaps = 8/242 (3%)
Query: 43 MIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPD 102
++ Y G++ +A +F +++D V ++ LI+G Q G +A+++F M ++PD
Sbjct: 329 LVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPD 388
Query: 103 EFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLF 162
L SL+ A S G L Q + +Y +K + + ALL++ AKC +++ AL F
Sbjct: 389 SNTLASLVVACSADGTLFRGQQLHAYTTKLGF-ASNNKIEGALLNLYAKCADIETALDYF 447
Query: 163 KEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVD 222
E ++V + M+ + ++ R+F M +E +VP++ + IL C G ++
Sbjct: 448 LETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLE 507
Query: 223 EGWN-YFQSMKQKYGISPSPDHFAC--MVDLLSRSGHLGDAYELMKSMHEPHAGAWGALL 279
G + Q +K + ++ + C ++D+ ++ G L A++++ +W ++
Sbjct: 508 LGEQIHSQIIKTNFQLNA----YVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMI 563
Query: 280 GA 281
Sbjct: 564 AG 565
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 122/285 (42%), Gaps = 48/285 (16%)
Query: 43 MIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPD 102
+ D Y GD+ A +F++ E+ + W+ +I + +F+ M S+NV P+
Sbjct: 126 LFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPN 185
Query: 103 EFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAA--LLDMNAKCGNMDRALK 160
E ++ A G V+ ++ +D + L+D+ ++ G +D A +
Sbjct: 186 EGTFSGVLEACR--GGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARR 243
Query: 161 LFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACS---- 216
+F + +D S+ +MI GLS + C +A+RLF M + G++P AF+ +L+AC
Sbjct: 244 VFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIES 303
Query: 217 -------------------------------HSGLVDEGWNYFQSMKQKYGISPSPDHFA 245
H G + + F +M Q+ ++ +
Sbjct: 304 LEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVT-----YN 358
Query: 246 CMVDLLSRSGHLGDAYELMKSMH----EPHAGAWGALLGACKLHG 286
+++ LS+ G+ A EL K MH EP + +L+ AC G
Sbjct: 359 TLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADG 403
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 120/234 (51%), Gaps = 14/234 (5%)
Query: 43 MIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPD 102
+I YAK G ++ A F + + K+ V+W+A+I+ Y ++G ++AL F +M NV+P+
Sbjct: 733 LISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPN 792
Query: 103 EFILVSLMSATSQLGHLELA-QWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKL 161
LV ++SA S +G ++ + +S S+ + + +H + ++DM + G + RA +
Sbjct: 793 HVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYV-CVVDMLTRAGLLSRAKEF 851
Query: 162 FKEMP-KRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGL 220
+EMP K D + + +++ +H E + F + + L P++ A ++L S+
Sbjct: 852 IQEMPIKPDALVWRTLLSACVVHKNME--IGEFAAHHLLELEPEDSATYVLL---SNLYA 906
Query: 221 VDEGWN----YFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDA-YELMKSMHE 269
V + W+ Q MK+K G+ P V S ++GD + L +HE
Sbjct: 907 VSKKWDARDLTRQKMKEK-GVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHE 959
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 93/208 (44%), Gaps = 3/208 (1%)
Query: 73 ALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQL-GHLELAQWVDSYVSK 131
A IS Y+ + Q ++ +E++ ++P+ L L+ + G L+ + + S + K
Sbjct: 55 AAISVYISEDESFQEKRI-DSVENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILK 113
Query: 132 SSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVR 191
+D + L D G++ A K+F EMP+R + ++ MI+ L+ +
Sbjct: 114 LGLD-SNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFG 172
Query: 192 LFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLL 251
LF M+ E + P+E F+ +L AC + + + G+ S ++DL
Sbjct: 173 LFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLY 232
Query: 252 SRSGHLGDAYELMKSMHEPHAGAWGALL 279
SR+G + A + + +W A++
Sbjct: 233 SRNGFVDLARRVFDGLRLKDHSSWVAMI 260
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 236 bits (602), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 123/338 (36%), Positives = 205/338 (60%), Gaps = 4/338 (1%)
Query: 10 NAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVV 69
A++ +VK G L SAR VF+ M ++NVV T+MI GY G + A +F KD+V
Sbjct: 179 TALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFNTTKVKDIV 238
Query: 70 AWSALISGYVQNGQP-NQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSY 128
++A++ G+ ++G+ +++ +++ M+ P+ S++ A S L E+ Q V +
Sbjct: 239 VYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQ 298
Query: 129 VSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGED 188
+ KS + + ++LLDM AKCG ++ A ++F +M ++++ S+ SMI G +G E+
Sbjct: 299 IMKSGV-YTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDGYGKNGNPEE 357
Query: 189 AVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMV 248
A+ LF M + P+ V F L+ACSHSGLVD+G+ F+SM++ Y + P +H+AC+V
Sbjct: 358 ALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMKPKMEHYACIV 417
Query: 249 DLLSRSGHLGDAYELMKSMHE-PHAGAWGALLGACKLHGDSDLGEIVANQLFELEP-QNA 306
DL+ R+G L A+E ++M E P + W ALL +C LHG+ +L I A++LF+L +
Sbjct: 418 DLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSCNLHGNVELASIAASELFKLNADKRP 477
Query: 307 ANYILLSNIYAAAERWIDVSLVRSRMRERSVQKIPGCS 344
Y+ LSN+YA+ ++W +VS +R M+ R + K G S
Sbjct: 478 GAYLALSNVYASNDKWDNVSKIREVMKRRRISKTIGRS 515
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 130/305 (42%), Gaps = 53/305 (17%)
Query: 49 KAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVS 108
K G ++ AR +F++ + + A++ +ISGY+++G + L + M K D + L
Sbjct: 81 KCGCLSYARQVFDELPKPTLSAYNYMISGYLKHGLVKELLLLVQRMSYSGEKADGYTLSM 140
Query: 109 LMSATSQLGHL-----ELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFK 163
++ A++ G L + V + + K ++L D +I AL+D K G ++ A +F+
Sbjct: 141 VLKASNSRGSTMILPRSLCRLVHARIIKCDVEL-DDVLITALVDTYVKSGKLESARTVFE 199
Query: 164 EMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSG-LVD 222
M ++V SMI G G EDA +FN+ V D V + ++ S SG
Sbjct: 200 TMKDENVVCCTSMISGYMNQGFVEDAEEIFNTT----KVKDIVVYNAMVEGFSRSGETAK 255
Query: 223 EGWNYFQSMKQKYGISPSPDHFACMV---------------------------------- 248
+ + SM Q+ G P+ FA ++
Sbjct: 256 RSVDMYISM-QRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSL 314
Query: 249 -DLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHGDSD--LGEIVANQLFELEPQN 305
D+ ++ G + DA + M E + +W +++ +G+ + L + F +EP
Sbjct: 315 LDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEP-- 372
Query: 306 AANYI 310
NY+
Sbjct: 373 --NYV 375
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 236 bits (602), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 116/302 (38%), Positives = 190/302 (62%), Gaps = 2/302 (0%)
Query: 42 TMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKP 101
++ID Y K + AR LFE + +++VV W+ LISG+ + + +A +F +M +++ P
Sbjct: 251 SIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILP 310
Query: 102 DEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKL 161
++ L +++ + S LG L + V Y+ ++ I++ + + +DM A+CGN+ A +
Sbjct: 311 NQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVN-FTSFIDMYARCGNIQMARTV 369
Query: 162 FKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLV 221
F MP+R+++S+ SMI I+G E+A+ F+ M + +VP+ V F +L+ACSHSG V
Sbjct: 370 FDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNV 429
Query: 222 DEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMH-EPHAGAWGALLG 280
EGW F+SM + YG+ P +H+ACMVDLL R+G +G+A + +M +P A AWGALL
Sbjct: 430 KEGWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLS 489
Query: 281 ACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQKI 340
AC++H + DL +A +L +EP+ ++ Y+LLSNIYA A W V+ VR +M + +K
Sbjct: 490 ACRIHKEVDLAGEIAEKLLSMEPEKSSVYVLLSNIYADAGMWEMVNCVRRKMGIKGYRKH 549
Query: 341 PG 342
G
Sbjct: 550 VG 551
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 137/272 (50%), Gaps = 2/272 (0%)
Query: 15 GFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSAL 74
G +++G L + + + + + V+ ++++ YA+ G M +A+ +F++ ++ V W L
Sbjct: 123 GLLENGILIHGLAMKNGLDKDDYVA-PSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVL 181
Query: 75 ISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSI 134
+ GY++ + + ++F M + D L+ L+ A + ++ + V + S
Sbjct: 182 MKGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSF 241
Query: 135 DLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFN 194
Q D++ A+++DM KC +D A KLF+ R++V + ++I G + +A LF
Sbjct: 242 IDQSDYLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFR 301
Query: 195 SMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRS 254
ML E ++P++ IL +CS G + G + M + GI +F +D+ +R
Sbjct: 302 QMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRN-GIEMDAVNFTSFIDMYARC 360
Query: 255 GHLGDAYELMKSMHEPHAGAWGALLGACKLHG 286
G++ A + M E + +W +++ A ++G
Sbjct: 361 GNIQMARTVFDMMPERNVISWSSMINAFGING 392
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 114/217 (52%), Gaps = 18/217 (8%)
Query: 34 EKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLE 93
E + V+FT+ ID YA+ G++ AR +F+ E++V++WS++I+ + NG +AL F +
Sbjct: 344 EMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHK 403
Query: 94 MESKNVKPDEFILVSLMSATSQLGHL-ELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKC 152
M+S+NV P+ VSL+SA S G++ E + +S + +++H A ++D+ +
Sbjct: 404 MKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEHY-ACMVDLLGRA 462
Query: 153 GNMDRALKLFKEMPKRDLVS-YCSMIQGLSIHG----CGEDAVRLFNSMLMEGLVPDEVA 207
G + A MP + + S + +++ IH GE A +L + ME P++ +
Sbjct: 463 GEIGEAKSFIDNMPVKPMASAWGALLSACRIHKEVDLAGEIAEKLLS---ME---PEKSS 516
Query: 208 FTIILTACSHSGLVDEG-WNYFQSMKQKYGISPSPDH 243
++L+ + D G W +++K GI H
Sbjct: 517 VYVLLS----NIYADAGMWEMVNCVRRKMGIKGYRKH 549
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 236 bits (602), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 124/312 (39%), Positives = 187/312 (59%), Gaps = 3/312 (0%)
Query: 34 EKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLE 93
+ NV + ++D Y + G M A+ +F+ ++ V+W+ALI+G+ + +AL++F
Sbjct: 193 DSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQG 252
Query: 94 MESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCG 153
M +P F SL A S G LE +WV +Y+ KS L LLDM AK G
Sbjct: 253 MLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVA-FAGNTLLDMYAKSG 311
Query: 154 NMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILT 213
++ A K+F + KRD+VS+ S++ + HG G++AV F M G+ P+E++F +LT
Sbjct: 312 SIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLT 371
Query: 214 ACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMH-EPHA 272
ACSHSGL+DEGW+Y++ MK K GI P H+ +VDLL R+G L A ++ M EP A
Sbjct: 372 ACSHSGLLDEGWHYYELMK-KDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTA 430
Query: 273 GAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWIDVSLVRSRM 332
W ALL AC++H +++LG A +FEL+P + +++L NIYA+ RW D + VR +M
Sbjct: 431 AIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKM 490
Query: 333 RERSVQKIPGCS 344
+E V+K P CS
Sbjct: 491 KESGVKKEPACS 502
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 130/259 (50%), Gaps = 2/259 (0%)
Query: 28 VFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQA 87
+ ++ ++V T+++ YAK G + AR +FE+ ++D V W+ LISGY Q+ +P A
Sbjct: 86 ILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDA 145
Query: 88 LKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLD 147
L F +M P+EF L S++ A + + + K D HV +ALLD
Sbjct: 146 LLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFD-SNVHVGSALLD 204
Query: 148 MNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVA 207
+ + G MD A +F + R+ VS+ ++I G + E A+ LF ML +G P +
Sbjct: 205 LYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFS 264
Query: 208 FTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSM 267
+ + ACS +G +++G + + K G ++D+ ++SG + DA ++ +
Sbjct: 265 YASLFGACSSTGFLEQG-KWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRL 323
Query: 268 HEPHAGAWGALLGACKLHG 286
+ +W +LL A HG
Sbjct: 324 AKRDVVSWNSLLTAYAQHG 342
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 236 bits (601), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 122/348 (35%), Positives = 209/348 (60%), Gaps = 5/348 (1%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLF 60
MP+RN+ SWNAM+ G+ ++ + A +F MPE++ S+ TMI G+ + +M A LF
Sbjct: 228 MPERNIISWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNKACGLF 287
Query: 61 EQATEKDVVAWSALISGYVQNGQPNQALKVFLEM-ESKNVKPDEFILVSLMSATSQLGHL 119
++ EK+V++W+ +I+GYV+N + +AL VF +M +VKP+ VS++SA S L L
Sbjct: 288 DRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGL 347
Query: 120 ELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKE--MPKRDLVSYCSMI 177
Q + +SKS + + + V +ALL+M +K G + A K+F + +RDL+S+ SMI
Sbjct: 348 VEGQQIHQLISKS-VHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMI 406
Query: 178 QGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGI 237
+ HG G++A+ ++N M G P V + +L ACSH+GLV++G +F+ + + +
Sbjct: 407 AVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESL 466
Query: 238 SPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGA-WGALLGACKLHGDSDLGEIVAN 296
+H+ C+VDL R+G L D + + + +GA+L AC +H + + + V
Sbjct: 467 PLREEHYTCLVDLCGRAGRLKDVTNFINCDDARLSRSFYGAILSACNVHNEVSIAKEVVK 526
Query: 297 QLFELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQKIPGCS 344
++ E +A Y+L+SNIYAA + + + +R +M+E+ ++K PGCS
Sbjct: 527 KVLETGSDDAGTYVLMSNIYAANGKREEAAEMRMKMKEKGLKKQPGCS 574
Score = 129 bits (324), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 145/280 (51%), Gaps = 50/280 (17%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAM-PEKNVVSFTTMIDGYAKAGDMAAARFL 59
+P+R+V +W ++ G++K GD+ AR +FD + KNVV++T M+ GY ++ ++ A L
Sbjct: 72 LPERDVVTWTHVITGYIKLGDMREARELFDRVDSRKNVVTWTAMVSGYLRSKQLSIAEML 131
Query: 60 FEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHL 119
F++ E++VV+W+ +I GY Q+G+ ++AL++F EM +N+
Sbjct: 132 FQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPERNI-------------------- 171
Query: 120 ELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQG 179
W + ++ AL+ + G +D A+ LF+ MP+RD+VS+ +M+ G
Sbjct: 172 --VSW--------------NSMVKALV----QRGRIDEAMNLFERMPRRDVVSWTAMVDG 211
Query: 180 LSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISP 239
L+ +G ++A RLF+ M + +++ ++T + + +DE FQ M ++ S
Sbjct: 212 LAKNGKVDEARRLFDCMPERNI----ISWNAMITGYAQNNRIDEADQLFQVMPERDFAS- 266
Query: 240 SPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALL 279
+ M+ R+ + A L M E + +W ++
Sbjct: 267 ----WNTMITGFIRNREMNKACGLFDRMPEKNVISWTTMI 302
Score = 125 bits (314), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 103/369 (27%), Positives = 173/369 (46%), Gaps = 56/369 (15%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLF 60
MP+RNV SWN M+ G+ + G + A +FD MPE+N+VS+ +M+ + G + A LF
Sbjct: 135 MPERNVVSWNTMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLF 194
Query: 61 EQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLE 120
E+ +DVV+W+A++ G +NG+ ++A ++F M +N+ ++++ +Q ++
Sbjct: 195 ERMPRRDVVSWTAMVDGLAKNGKVDEARRLFDCMPERNI----ISWNAMITGYAQNNRID 250
Query: 121 LAQWVDSYVSKSSIDLQQDHVIAALL---DMNAKCGNMDRALKLFKEMPKRDLVSYCSMI 177
A + + + + +I + +MN CG LF MP+++++S+ +MI
Sbjct: 251 EADQLFQVMPERDF-ASWNTMITGFIRNREMNKACG-------LFDRMPEKNVISWTTMI 302
Query: 178 QGLSIHGCGEDAVRLFNSMLMEGLV-PDEVAFTIILTACSH-SGLVDEGWNYFQ----SM 231
G + E+A+ +F+ ML +G V P+ + IL+ACS +GLV EG Q S+
Sbjct: 303 TGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLV-EGQQIHQLISKSV 361
Query: 232 KQKYGISPSP-------------------DHFACMVDLLS---------RSGHLGDAYEL 263
QK I S + C DL+S GH +A E+
Sbjct: 362 HQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEM 421
Query: 264 MKSMH----EPHAGAWGALLGACKLHGDSDLGEIVANQLFELE--PQNAANYILLSNIYA 317
M +P A + LL AC G + G L E P +Y L ++
Sbjct: 422 YNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLREEHYTCLVDLCG 481
Query: 318 AAERWIDVS 326
A R DV+
Sbjct: 482 RAGRLKDVT 490
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 133/257 (51%), Gaps = 23/257 (8%)
Query: 26 RGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPN 85
R ++ + V +I K G +A AR LF+ E+DVV W+ +I+GY++ G
Sbjct: 35 RSIYSSSSRPRVPQPEWLIGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMR 94
Query: 86 QALKVFLEMES-KNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIA- 143
+A ++F ++S KNV +++S + L +A+ + ++ + +V++
Sbjct: 95 EARELFDRVDSRKNV----VTWTAMVSGYLRSKQLSIAEMLFQ-------EMPERNVVSW 143
Query: 144 -ALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLV 202
++D A+ G +D+AL+LF EMP+R++VS+ SM++ L G ++A+ LF M
Sbjct: 144 NTMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERMPRR--- 200
Query: 203 PDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYE 262
D V++T ++ + +G VDE F M ++ IS + M+ +++ + +A +
Sbjct: 201 -DVVSWTAMVDGLAKNGKVDEARRLFDCMPERNIIS-----WNAMITGYAQNNRIDEADQ 254
Query: 263 LMKSMHEPHAGAWGALL 279
L + M E +W ++
Sbjct: 255 LFQVMPERDFASWNTMI 271
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 235 bits (599), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 136/396 (34%), Positives = 220/396 (55%), Gaps = 52/396 (13%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVF-----------DAM----------------- 32
+P+RN+ SW +M+ G+ +G+ A +F DAM
Sbjct: 137 IPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRV 196
Query: 33 PEKNVV----SFT-------------TMIDGYAKAGD--MAAARFLFEQATEKDVVAWSA 73
P K + SF T++D YAK G+ +A AR +F+Q +KD V++++
Sbjct: 197 PAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNS 256
Query: 74 LISGYVQNGQPNQALKVFLEM-ESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKS 132
++S Y Q+G N+A +VF + ++K V + L +++ A S G L + + + V +
Sbjct: 257 IMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIR- 315
Query: 133 SIDLQQDHVI-AALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVR 191
+ L+ D ++ +++DM KCG ++ A K F M +++ S+ +MI G +HG A+
Sbjct: 316 -MGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALE 374
Query: 192 LFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLL 251
LF +M+ G+ P+ + F +L ACSH+GL EGW +F +MK ++G+ P +H+ CMVDLL
Sbjct: 375 LFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLL 434
Query: 252 SRSGHLGDAYELMKSMH-EPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYI 310
R+G L AY+L++ M +P + W +LL AC++H + +L EI +LFEL+ N Y+
Sbjct: 435 GRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYM 494
Query: 311 LLSNIYAAAERWIDVSLVRSRMRERSVQKIPGCSKL 346
LLS+IYA A RW DV VR M+ R + K PG S L
Sbjct: 495 LLSHIYADAGRWKDVERVRMIMKNRGLVKPPGFSLL 530
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 143/324 (44%), Gaps = 42/324 (12%)
Query: 3 QRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQ 62
Q ++ +A++ + G L AR VFD +P++N+VS+T+MI GY G+ A LF
Sbjct: 108 QSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLF-- 165
Query: 63 ATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELA 122
KD++ V + A+ FL D LVS++SA S++ L
Sbjct: 166 ---KDLL---------VDENDDDDAM--FL---------DSMGLVSVISACSRVPAKGLT 202
Query: 123 QWVDSYVSKSSIDLQQDHVIAALLDMNAKCGN--MDRALKLFKEMPKRDLVSYCSMIQGL 180
+ + S+V K D + V LLD AK G + A K+F ++ +D VSY S++
Sbjct: 203 ESIHSFVIKRGFD-RGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVY 261
Query: 181 SIHGCGEDAVRLFNSMLMEGLVP-DEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISP 239
+ G +A +F ++ +V + + + +L A SHSG + G + G+
Sbjct: 262 AQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIG-KCIHDQVIRMGLED 320
Query: 240 SPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHGDSDLGEIVANQLF 299
++D+ + G + A + M + +W A++ +HG A +
Sbjct: 321 DVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGH-------AAKAL 373
Query: 300 ELEPQN-----AANYILLSNIYAA 318
EL P NYI ++ AA
Sbjct: 374 ELFPAMIDSGVRPNYITFVSVLAA 397
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 86/166 (51%), Gaps = 10/166 (6%)
Query: 59 LFEQATEK-DVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLG 117
LF + +K DV +W+++I+ ++G +AL F M ++ P + A S L
Sbjct: 31 LFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSL- 89
Query: 118 HLELAQWVDSYVSKSSIDLQQD-HVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSM 176
++ ++ Q D V +AL+ M + CG ++ A K+F E+PKR++VS+ SM
Sbjct: 90 -FDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSM 148
Query: 177 IQGLSIHGCGEDAVRLFNSMLM------EGLVPDEVAFTIILTACS 216
I+G ++G DAV LF +L+ + + D + +++ACS
Sbjct: 149 IRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACS 194
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 234 bits (598), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 118/305 (38%), Positives = 187/305 (61%), Gaps = 3/305 (0%)
Query: 42 TMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKP 101
+++D YAK A +F+ ++ V+W+ALISGYVQ G LK+F +M N++
Sbjct: 391 SLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRA 450
Query: 102 DEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKL 161
D+ +++ A++ L L + + +++ +S +L+ + L+DM AKCG++ A+++
Sbjct: 451 DQSTFATVLKASASFASLLLGKQLHAFIIRSG-NLENVFSGSGLVDMYAKCGSIKDAVQV 509
Query: 162 FKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLV 221
F+EMP R+ VS+ ++I + +G GE A+ F M+ GL PD V+ +LTACSH G V
Sbjct: 510 FEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFV 569
Query: 222 DEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSM-HEPHAGAWGALLG 280
++G YFQ+M YGI+P H+ACM+DLL R+G +A +LM M EP W ++L
Sbjct: 570 EQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLN 629
Query: 281 ACKLHGDSDLGEIVANQLFELEP-QNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQK 339
AC++H + L E A +LF +E ++AA Y+ +SNIYAAA W V V+ MRER ++K
Sbjct: 630 ACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKK 689
Query: 340 IPGCS 344
+P S
Sbjct: 690 VPAYS 694
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 106/208 (50%), Gaps = 3/208 (1%)
Query: 10 NAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVV 69
N ++ ++ G +S+AR V+D MP KN VS TMI G+ K GD+++AR LF+ ++ VV
Sbjct: 52 NFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVV 111
Query: 70 AWSALISGYVQNGQPNQALKVFLEM--ESKNVKPDEFILVSLMSATSQLGHLELAQWVDS 127
W+ L+ Y +N ++A K+F +M S PD +L+ + V +
Sbjct: 112 TWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHA 171
Query: 128 YVSKSSIDLQQDHVIA-ALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCG 186
+ K D ++ LL + +D A LF+E+P++D V++ ++I G G
Sbjct: 172 FAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLY 231
Query: 187 EDAVRLFNSMLMEGLVPDEVAFTIILTA 214
+++ LF M G P + F+ +L A
Sbjct: 232 TESIHLFLKMRQSGHQPSDFTFSGVLKA 259
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/334 (23%), Positives = 149/334 (44%), Gaps = 50/334 (14%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEK------------------------- 35
+P+++ ++N ++ G+ KDG + + +F M +
Sbjct: 210 IPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALG 269
Query: 36 ---NVVSFTT-----------MIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQN 81
+ +S TT ++D Y+K + R LF++ E D V+++ +IS Y Q
Sbjct: 270 QQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQA 329
Query: 82 GQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHV 141
Q +L F EM+ F +++S + L L++ + + ++ D HV
Sbjct: 330 DQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATAD-SILHV 388
Query: 142 IAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGL---SIHGCGEDAVRLFNSMLM 198
+L+DM AKC + A +FK +P+R VS+ ++I G +HG G ++LF M
Sbjct: 389 GNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAG---LKLFTKMRG 445
Query: 199 EGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLG 258
L D+ F +L A + + G + + G + + +VD+ ++ G +
Sbjct: 446 SNLRADQSTFATVLKASASFASLLLG-KQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIK 504
Query: 259 DAYELMKSMHEPHAGAWGALLGACKLHGDSDLGE 292
DA ++ + M + +A +W AL+ A H D+ GE
Sbjct: 505 DAVQVFEEMPDRNAVSWNALISA---HADNGDGE 535
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 122/282 (43%), Gaps = 43/282 (15%)
Query: 1 MPQRNVASWNAMLCGFVKDG-------------------DLSSARGVFDAMPE------- 34
+PQR SW A++ G+V+ G D S+ V A
Sbjct: 412 LPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLG 471
Query: 35 -------------KNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQN 81
+NV S + ++D YAK G + A +FE+ +++ V+W+ALIS + N
Sbjct: 472 KQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADN 531
Query: 82 GQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLEL-AQWVDSYVSKSSIDLQQDH 140
G A+ F +M ++PD ++ +++A S G +E ++ + I ++ H
Sbjct: 532 GDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKH 591
Query: 141 VIAALLDMNAKCGNMDRALKLFKEMP-KRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLME 199
A +LD+ + G A KL EMP + D + + S++ IH A R +
Sbjct: 592 -YACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSM 650
Query: 200 GLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSP 241
+ D A+ + + +G ++ + ++M+++ GI P
Sbjct: 651 EKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRER-GIKKVP 691
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 69/324 (21%), Positives = 127/324 (39%), Gaps = 49/324 (15%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNV------VSFTTMIDG-------- 46
MP R V +W ++ + ++ A +F M + V+FTT++ G
Sbjct: 105 MPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQN 164
Query: 47 -----------------------------YAKAGDMAAARFLFEQATEKDVVAWSALISG 77
Y + + A LFE+ EKD V ++ LI+G
Sbjct: 165 AVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITG 224
Query: 78 YVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQ 137
Y ++G +++ +FL+M +P +F ++ A L L Q + + + +
Sbjct: 225 YEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFS-R 283
Query: 138 QDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSML 197
V +LD +K + LF EMP+ D VSY +I S E ++ F M
Sbjct: 284 DASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQ 343
Query: 198 MEGLVPDEVAFTIILTACSHSGLVDEGWN-YFQSMKQKYGISPSPDHFA-CMVDLLSRSG 255
G F +L+ ++ + G + Q++ + S H +VD+ ++
Sbjct: 344 CMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQAL---LATADSILHVGNSLVDMYAKCE 400
Query: 256 HLGDAYELMKSMHEPHAGAWGALL 279
+A + KS+ + +W AL+
Sbjct: 401 MFEEAELIFKSLPQRTTVSWTALI 424
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 234 bits (597), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 116/318 (36%), Positives = 199/318 (62%), Gaps = 16/318 (5%)
Query: 41 TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMES---- 96
T++D Y++ G + A +F + ++D+V W+ +I+GYV + AL + +M++
Sbjct: 444 NTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERK 503
Query: 97 -------KNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVI-AALLDM 148
++KP+ L++++ + + L L + + +Y K+ +L D + +AL+DM
Sbjct: 504 VSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKN--NLATDVAVGSALVDM 561
Query: 149 NAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAF 208
AKCG + + K+F ++P+++++++ +I +HG G++A+ L M+++G+ P+EV F
Sbjct: 562 YAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTF 621
Query: 209 TIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMH 268
+ ACSHSG+VDEG F MK YG+ PS DH+AC+VDLL R+G + +AY+LM M
Sbjct: 622 ISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMP 681
Query: 269 EP--HAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWIDVS 326
AGAW +LLGA ++H + ++GEI A L +LEP A++Y+LL+NIY++A W +
Sbjct: 682 RDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKAT 741
Query: 327 LVRSRMRERSVQKIPGCS 344
VR M+E+ V+K PGCS
Sbjct: 742 EVRRNMKEQGVRKEPGCS 759
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 118/250 (47%), Gaps = 7/250 (2%)
Query: 36 NVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEME 95
+V T+++ Y K GD A +F++ +E++ V+W++LIS + AL+ F M
Sbjct: 132 SVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCML 191
Query: 96 SKNVKPDEFILVSLMSATSQLGHLE---LAQWVDSY-VSKSSIDLQQDHVIAALLDMNAK 151
+NV+P F LVS+++A S L E + + V +Y + K ++ +I L+ M K
Sbjct: 192 DENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELN---SFIINTLVAMYGK 248
Query: 152 CGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTII 211
G + + L RDLV++ +++ L + +A+ M++EG+ PDE + +
Sbjct: 249 LGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSV 308
Query: 212 LTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPH 271
L ACSH ++ G + + + + +VD+ + + M +
Sbjct: 309 LPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRK 368
Query: 272 AGAWGALLGA 281
G W A++
Sbjct: 369 IGLWNAMIAG 378
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 113/249 (45%), Gaps = 6/249 (2%)
Query: 34 EKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLE 93
E N T++ Y K G +A+++ L +D+V W+ ++S QN Q +AL+ E
Sbjct: 233 ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLRE 292
Query: 94 MESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCG 153
M + V+PDEF + S++ A S L L + + +Y K+ + V +AL+DM C
Sbjct: 293 MVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCK 352
Query: 154 NMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLME-GLVPDEVAFTIIL 212
+ ++F M R + + +MI G S + ++A+ LF M GL+ + ++
Sbjct: 353 QVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVV 412
Query: 213 TACSHSGLVDEGWNYFQSMKQKYGISPSPDHFA--CMVDLLSRSGHLGDAYELMKSMHEP 270
AC SG K G+ D F ++D+ SR G + A + M +
Sbjct: 413 PACVRSGAFSRK-EAIHGFVVKRGL--DRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDR 469
Query: 271 HAGAWGALL 279
W ++
Sbjct: 470 DLVTWNTMI 478
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 73/147 (49%)
Query: 71 WSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVS 130
W L+ V++ +A+ +++M +KPD + +L+ A + L +EL + + ++V
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 131 KSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAV 190
K + V L+++ KCG+ K+F + +R+ VS+ S+I L E A+
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 191 RLFNSMLMEGLVPDEVAFTIILTACSH 217
F ML E + P ++TACS+
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSN 211
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 233 bits (594), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 115/303 (37%), Positives = 179/303 (59%), Gaps = 6/303 (1%)
Query: 47 YAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFIL 106
YA +GD+ A LF +D++ W+A+ISGYVQ G + L ++ +M + PD++
Sbjct: 153 YALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTF 212
Query: 107 VSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVI--AALLDMNAKCGNMDRALKLFKE 164
S+ A S L LE + + + K I + ++I +AL+DM KC + ++F +
Sbjct: 213 ASVFRACSALDRLEHGKRAHAVMIKRCI---KSNIIVDSALVDMYFKCSSFSDGHRVFDQ 269
Query: 165 MPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEG 224
+ R+++++ S+I G HG + ++ F M EG P+ V F ++LTAC+H GLVD+G
Sbjct: 270 LSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKG 329
Query: 225 WNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYE-LMKSMHEPHAGAWGALLGACK 283
W +F SMK+ YGI P H+A MVD L R+G L +AYE +MKS + H WG+LLGAC+
Sbjct: 330 WEHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGACR 389
Query: 284 LHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQKIPGC 343
+HG+ L E+ A + EL+P N NY++ +N YA+ S VR +M V+K PG
Sbjct: 390 IHGNVKLLELAATKFLELDPTNGGNYVVFANGYASCGLREAASKVRRKMENAGVKKDPGY 449
Query: 344 SKL 346
S++
Sbjct: 450 SQI 452
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/222 (21%), Positives = 96/222 (43%), Gaps = 42/222 (18%)
Query: 4 RNVASWNAMLCGFVKDG----------DLSSARGVFDAMP-------------------- 33
R++ WNAM+ G+V+ G D+ R V D
Sbjct: 172 RDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKRA 231
Query: 34 ---------EKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQP 84
+ N++ + ++D Y K + +F+Q + ++V+ W++LISGY +G+
Sbjct: 232 HAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKV 291
Query: 85 NQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQ-QDHVIA 143
++ LK F +M+ + +P+ + +++A + G ++ W Y K ++ + A
Sbjct: 292 SEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKG-WEHFYSMKRDYGIEPEGQHYA 350
Query: 144 ALLDMNAKCGNMDRALKLFKEMP-KRDLVSYCSMIQGLSIHG 184
A++D + G + A + + P K + S++ IHG
Sbjct: 351 AMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGACRIHG 392
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/148 (21%), Positives = 66/148 (44%), Gaps = 1/148 (0%)
Query: 139 DHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLM 198
+++ LL + A G++ A LF+ + RDL+ + +MI G G ++ + ++ M
Sbjct: 143 EYLKVKLLILYALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQ 202
Query: 199 EGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLG 258
+VPD+ F + ACS ++ G M ++ I + + +VD+ +
Sbjct: 203 NRIVPDQYTFASVFRACSALDRLEHGKRAHAVMIKR-CIKSNIIVDSALVDMYFKCSSFS 261
Query: 259 DAYELMKSMHEPHAGAWGALLGACKLHG 286
D + + + + W +L+ HG
Sbjct: 262 DGHRVFDQLSTRNVITWTSLISGYGYHG 289
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 233 bits (594), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 128/386 (33%), Positives = 209/386 (54%), Gaps = 43/386 (11%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSS-ARGVFDAM-----PEKNVVSFTT------------ 42
M +V SW A++ G++K+ +L++ A +F M E N +F++
Sbjct: 331 MEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPR 390
Query: 43 -----------------------MIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYV 79
+I + K+ M A+ FE +EK++V+++ + G
Sbjct: 391 VGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTC 450
Query: 80 QNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQD 139
+N QA K+ E+ + + F SL+S + +G + + + S V K + Q
Sbjct: 451 RNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQP 510
Query: 140 HVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLME 199
V AL+ M +KCG++D A ++F M R+++S+ SMI G + HG + FN M+ E
Sbjct: 511 -VCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEE 569
Query: 200 GLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGD 259
G+ P+EV + IL+ACSH GLV EGW +F SM + + I P +H+ACMVDLL R+G L D
Sbjct: 570 GVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTD 629
Query: 260 AYELMKSM-HEPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAA 318
A+E + +M + W LGAC++H +++LG++ A ++ EL+P A YI LSNIYA
Sbjct: 630 AFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYAC 689
Query: 319 AERWIDVSLVRSRMRERSVQKIPGCS 344
A +W + + +R +M+ER++ K GCS
Sbjct: 690 AGKWEESTEMRRKMKERNLVKEGGCS 715
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 133/259 (51%), Gaps = 15/259 (5%)
Query: 34 EKNVVSFTTMIDGYAKAGD-MAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFL 92
E +V ++ID + K + A +F++ +E +VV W+ +I+ +Q G P +A++ FL
Sbjct: 199 ESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFL 258
Query: 93 EMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKC 152
+M + D+F L S+ SA ++L +L L + + S+ +S + D V +L+DM AKC
Sbjct: 259 DMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGL---VDDVECSLVDMYAKC 315
Query: 153 ---GNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGC--GEDAVRLFNSMLMEGLV-PDEV 206
G++D K+F M ++S+ ++I G + C +A+ LF+ M+ +G V P+
Sbjct: 316 SADGSVDDCRKVFDRMEDHSVMSWTALITGY-MKNCNLATEAINLFSEMITQGHVEPNHF 374
Query: 207 AFTIILTACSHSGLVDEGWNYF-QSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMK 265
F+ AC + G Q+ K+ G++ + ++ + +S + DA +
Sbjct: 375 TFSSAFKACGNLSDPRVGKQVLGQAFKR--GLASNSSVANSVISMFVKSDRMEDAQRAFE 432
Query: 266 SMHEPHAGAWGALL-GACK 283
S+ E + ++ L G C+
Sbjct: 433 SLSEKNLVSYNTFLDGTCR 451
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 133/269 (49%), Gaps = 15/269 (5%)
Query: 20 GDLSSARGV-FDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFE---QATEKDVVAWSALI 75
G L AR + FD P+ V + ++I Y+K+GD A A +FE + ++DVV+WSA++
Sbjct: 81 GKLVHARLIEFDIEPDS--VLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMM 138
Query: 76 SGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSID 135
+ Y NG+ A+KVF+E + P+++ +++ A S + + + ++ K+
Sbjct: 139 ACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHF 198
Query: 136 LQQDHVIAALLDMNAKCGN-MDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFN 194
V +L+DM K N + A K+F +M + ++V++ MI G +A+R F
Sbjct: 199 ESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFL 258
Query: 195 SMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFAC-MVDLLSR 253
M++ G D+ + + +AC+ + G S + G+ D C +VD+ ++
Sbjct: 259 DMVLSGFESDKFTLSSVFSACAELENLSLG-KQLHSWAIRSGL---VDDVECSLVDMYAK 314
Query: 254 ---SGHLGDAYELMKSMHEPHAGAWGALL 279
G + D ++ M + +W AL+
Sbjct: 315 CSADGSVDDCRKVFDRMEDHSVMSWTALI 343
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 100/222 (45%), Gaps = 22/222 (9%)
Query: 74 LISGYVQNGQPNQALKVFLEMESKNVKP-DEFILVSLMSATSQLGHLELAQWVDSYVSKS 132
LI ++ G A+ M ++P D SL+ + + L + V + + +
Sbjct: 32 LILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIE- 90
Query: 133 SIDLQQDHVI-AALLDMNAKCGNMDRALKLFKEMP---KRDLVSYCSMIQGLSIHGCGED 188
D++ D V+ +L+ + +K G+ +A +F+ M KRD+VS+ +M+ +G D
Sbjct: 91 -FDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELD 149
Query: 189 AVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHF---- 244
A+++F L GLVP++ +T ++ ACS+S V G + G HF
Sbjct: 150 AIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVG-------RVTLGFLMKTGHFESDV 202
Query: 245 ---ACMVDLLSR-SGHLGDAYELMKSMHEPHAGAWGALLGAC 282
++D+ + +AY++ M E + W ++ C
Sbjct: 203 CVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRC 244
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 233 bits (594), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 127/363 (34%), Positives = 208/363 (57%), Gaps = 26/363 (7%)
Query: 1 MPQRNVASWNAMLCGFVKD-GDLSSAR---GV----------FDAMPEKNVVSFTTMIDG 46
M NV+ N +K DLS+ R GV D + +V+F
Sbjct: 98 MLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQAALVTF------ 151
Query: 47 YAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFIL 106
Y+K GDM AR +F++ EK +VAW++L+SG+ QNG ++A++VF +M +PD
Sbjct: 152 YSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATF 211
Query: 107 VSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMP 166
VSL+SA +Q G + L WV Y+ +DL + AL+++ ++CG++ +A ++F +M
Sbjct: 212 VSLLSACAQTGAVSLGSWVHQYIISEGLDLNVK-LGTALINLYSRCGDVGKAREVFDKMK 270
Query: 167 KRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLME-GLVPDEVAFTIILTACSHSGLVDEGW 225
+ ++ ++ +MI HG G+ AV LFN M + G +P+ V F +L+AC+H+GLV+EG
Sbjct: 271 ETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGR 330
Query: 226 NYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGA----WGALLGA 281
+ ++ M + Y + P +H CMVD+L R+G L +AY+ + + W A+LGA
Sbjct: 331 SVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKATAPALWTAMLGA 390
Query: 282 CKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQKIP 341
CK+H + DLG +A +L LEP N ++++LSNIYA + + +VS +R M +++K
Sbjct: 391 CKMHRNYDLGVEIAKRLIALEPDNPGHHVMLSNIYALSGKTDEVSHIRDGMMRNNLRKQV 450
Query: 342 GCS 344
G S
Sbjct: 451 GYS 453
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 119/251 (47%), Gaps = 10/251 (3%)
Query: 40 FTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNV 99
T +I A +A LF D ++++I + P + + M S NV
Sbjct: 44 LTKLITLACSARAIAYTHLLFLSVPLPDDFLFNSVIKSTSKLRLPLHCVAYYRRMLSSNV 103
Query: 100 KPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRAL 159
P + S++ + + L L + + V + S L +V AAL+ +KCG+M+ A
Sbjct: 104 SPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDT-YVQAALVTFYSKCGDMEGAR 162
Query: 160 KLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSG 219
++F MP++ +V++ S++ G +G ++A+++F M G PD F +L+AC+ +G
Sbjct: 163 QVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTG 222
Query: 220 LVDEGWNYFQSMKQKYGISPSPDHF----ACMVDLLSRSGHLGDAYELMKSMHEPHAGAW 275
V G S +Y IS D +++L SR G +G A E+ M E + AW
Sbjct: 223 AVSLG-----SWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAW 277
Query: 276 GALLGACKLHG 286
A++ A HG
Sbjct: 278 TAMISAYGTHG 288
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2761195-2764281 REVERSE
LENGTH=1028
Length = 1028
Score = 233 bits (593), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 138/387 (35%), Positives = 220/387 (56%), Gaps = 45/387 (11%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNV----VSFTTMID----------- 45
+P+ +V S NA++ G+ ++ +L A +F M + V ++F T+++
Sbjct: 590 LPEWSVVSMNALIAGYSQN-NLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLG 648
Query: 46 ----------GYAKAGD---------------MAAARFLF-EQATEKDVVAWSALISGYV 79
G++ G+ M A LF E ++ K +V W+ ++SG+
Sbjct: 649 TQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHS 708
Query: 80 QNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQD 139
QNG +ALK + EM V PD+ V+++ S L L + + S + + DL +
Sbjct: 709 QNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDE- 767
Query: 140 HVIAALLDMNAKCGNMDRALKLFKEMPKR-DLVSYCSMIQGLSIHGCGEDAVRLFNSMLM 198
L+DM AKCG+M + ++F EM +R ++VS+ S+I G + +G EDA+++F+SM
Sbjct: 768 LTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQ 827
Query: 199 EGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLG 258
++PDE+ F +LTACSH+G V +G F+ M +YGI DH ACMVDLL R G+L
Sbjct: 828 SHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQ 887
Query: 259 DAYELMKSMH-EPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYA 317
+A + +++ + +P A W +LLGAC++HGD GEI A +L ELEPQN++ Y+LLSNIYA
Sbjct: 888 EADDFIEAQNLKPDARLWSSLLGACRIHGDDIRGEISAEKLIELEPQNSSAYVLLSNIYA 947
Query: 318 AAERWIDVSLVRSRMRERSVQKIPGCS 344
+ W + +R MR+R V+K+PG S
Sbjct: 948 SQGCWEKANALRKVMRDRGVKKVPGYS 974
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 146/281 (51%), Gaps = 6/281 (2%)
Query: 5 NVASWNAMLCGFVKDGDLSSARGVFDAMPEK----NVVSFTTMIDGYAKAGDMAAARFLF 60
N W + G+VK G A VF+ M ++ + ++F T+I+ Y + G + AR LF
Sbjct: 225 NTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLF 284
Query: 61 EQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLE 120
+ + DVVAW+ +ISG+ + G A++ F M +VK L S++SA + +L+
Sbjct: 285 GEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLD 344
Query: 121 LAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGL 180
L V + K + +V ++L+ M +KC M+ A K+F+ + +++ V + +MI+G
Sbjct: 345 LGLVVHAEAIKLGL-ASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGY 403
Query: 181 SIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPS 240
+ +G + LF M G D+ FT +L+ C+ S ++ G + F S+ K ++ +
Sbjct: 404 AHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMG-SQFHSIIIKKKLAKN 462
Query: 241 PDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGA 281
+VD+ ++ G L DA ++ + M + W ++G+
Sbjct: 463 LFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGS 503
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 124/246 (50%), Gaps = 2/246 (0%)
Query: 36 NVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEME 95
N+ ++++ Y+K M AA +FE EK+ V W+A+I GY NG+ ++ +++F++M+
Sbjct: 361 NIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMK 420
Query: 96 SKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNM 155
S D+F SL+S + LE+ S + K + + V AL+DM AKCG +
Sbjct: 421 SSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKL-AKNLFVGNALVDMYAKCGAL 479
Query: 156 DRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTAC 215
+ A ++F+ M RD V++ ++I +A LF M + G+V D L AC
Sbjct: 480 EDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKAC 539
Query: 216 SHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAW 275
+H + +G + K G+ + ++D+ S+ G + DA ++ S+ E +
Sbjct: 540 THVHGLYQG-KQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSM 598
Query: 276 GALLGA 281
AL+
Sbjct: 599 NALIAG 604
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 115/239 (48%), Gaps = 4/239 (1%)
Query: 35 KNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEM 94
KN+ ++D YAK G + AR +FE+ ++D V W+ +I YVQ+ ++A +F M
Sbjct: 461 KNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRM 520
Query: 95 ESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGN 154
+ D L S + A + + L + V K +D + H ++L+DM +KCG
Sbjct: 521 NLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLD-RDLHTGSSLIDMYSKCGI 579
Query: 155 MDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTA 214
+ A K+F +P+ +VS ++I G S + E+AV LF ML G+ P E+ F I+ A
Sbjct: 580 IKDARKVFSSLPEWSVVSMNALIAGYSQNNL-EEAVVLFQEMLTRGVNPSEITFATIVEA 638
Query: 215 CSHSGLVDEGWNYFQSMKQKYGISPSPDHFAC-MVDLLSRSGHLGDAYELMKSMHEPHA 272
C + G F K G S ++ ++ + S + +A L + P +
Sbjct: 639 CHKPESLTLG-TQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKS 696
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 143/327 (43%), Gaps = 47/327 (14%)
Query: 22 LSSARGVFDAMPEKNVVSF----------------------TTMIDGYAKAGDMAAARFL 59
L +R VFD MP++ ++ ++D YAK ++ A
Sbjct: 58 LFKSRKVFDEMPQRLALALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQ 117
Query: 60 FEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHL 119
F+ EKDV AW++++S Y G+P + L+ F+ + + P++F ++S ++ ++
Sbjct: 118 FD-FLEKDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNV 176
Query: 120 ELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQG 179
E + + + K ++ + + AL+DM AKC + A ++F+ + + V + + G
Sbjct: 177 EFGRQIHCSMIKMGLE-RNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSG 235
Query: 180 LSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISP 239
G E+AV +F M EG PD +AF ++ G + + F M
Sbjct: 236 YVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEM-------S 288
Query: 240 SPDHFACMVDLLSRSGHLGDA-------YELMKSMHEPHAGAWGALLGACKLHGDSDLGE 292
SPD A V ++S G G + + KS + G++L A + + DLG
Sbjct: 289 SPDVVAWNV-MISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGL 347
Query: 293 IVANQLFELEPQNAANYILLSNIYAAA 319
+V + +L L SNIY +
Sbjct: 348 VVHAEAIKLG--------LASNIYVGS 366
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 100/192 (52%), Gaps = 2/192 (1%)
Query: 34 EKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLE 93
++++ + +++ID Y+K G + AR +F E VV+ +ALI+GY QN +A+ +F E
Sbjct: 561 DRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQN-NLEEAVVLFQE 619
Query: 94 MESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCG 153
M ++ V P E +++ A + L L ++K + +++ +LL M
Sbjct: 620 MLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSR 679
Query: 154 NMDRALKLFKEMPK-RDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIIL 212
M A LF E+ + +V + M+ G S +G E+A++ + M +G++PD+ F +L
Sbjct: 680 GMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVL 739
Query: 213 TACSHSGLVDEG 224
CS + EG
Sbjct: 740 RVCSVLSSLREG 751
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 233 bits (593), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 130/338 (38%), Positives = 206/338 (60%), Gaps = 2/338 (0%)
Query: 10 NAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVV 69
N ML +V G L A +F M +VV++ +MI G+AK G + A+ LF++ +++ V
Sbjct: 165 NTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGV 224
Query: 70 AWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYV 129
+W+++ISG+V+NG+ AL +F EM+ K+VKPD F +VSL++A + LG E +W+ Y+
Sbjct: 225 SWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYI 284
Query: 130 SKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDA 189
++ +L V+ AL+DM KCG ++ L +F+ PK+ L + SMI GL+ +G E A
Sbjct: 285 VRNRFELNSI-VVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGLANNGFEERA 343
Query: 190 VRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVD 249
+ LF+ + GL PD V+F +LTAC+HSG V +F+ MK+KY I PS H+ MV+
Sbjct: 344 MDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSIKHYTLMVN 403
Query: 250 LLSRSGHLGDAYELMKSMH-EPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAAN 308
+L +G L +A L+K+M E W +LL AC+ G+ ++ + A L +L+P
Sbjct: 404 VLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEMAKRAAKCLKKLDPDETCG 463
Query: 309 YILLSNIYAAAERWIDVSLVRSRMRERSVQKIPGCSKL 346
Y+LLSN YA+ + + R M+ER ++K GCS +
Sbjct: 464 YVLLSNAYASYGLFEEAVEQRLLMKERQMEKEVGCSSI 501
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/283 (21%), Positives = 123/283 (43%), Gaps = 40/283 (14%)
Query: 30 DAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALK 89
D + V++F A DM A +F + K+ W+ +I G+ ++ P A+
Sbjct: 56 DTVTASRVLAFCC-----ASPSDMNYAYLVFTRINHKNPFVWNTIIRGFSRSSFPEMAIS 110
Query: 90 VFLEM--ESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSID------------ 135
+F++M S +VKP S+ A +LG + + V K ++
Sbjct: 111 IFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHM 170
Query: 136 -------LQQDHVIAALLDMN-----------AKCGNMDRALKLFKEMPKRDLVSYCSMI 177
++ + ++ + AKCG +D+A LF EMP+R+ VS+ SMI
Sbjct: 171 YVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMI 230
Query: 178 QGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEG-WNYFQSMKQKYG 236
G +G +DA+ +F M + + PD +L AC++ G ++G W + ++ ++
Sbjct: 231 SGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFE 290
Query: 237 ISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALL 279
++ ++D+ + G + + + + + W +++
Sbjct: 291 LNSIV--VTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMI 331
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 120/276 (43%), Gaps = 45/276 (16%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNV----------------------- 37
MPQRN SWN+M+ GFV++G A +F M EK+V
Sbjct: 218 MPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQG 277
Query: 38 ----------------VSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQN 81
+ T +ID Y K G + +FE A +K + W+++I G N
Sbjct: 278 RWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGLANN 337
Query: 82 GQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELA-QWVDSYVSKSSIDLQQDH 140
G +A+ +F E+E ++PD + +++A + G + A ++ K I+ H
Sbjct: 338 GFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSIKH 397
Query: 141 VIAALLDMNAKCGNMDRALKLFKEMP-KRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLME 199
++++ G ++ A L K MP + D V + S++ G E A R + ++
Sbjct: 398 Y-TLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEMAKR--AAKCLK 454
Query: 200 GLVPDEVAFTIILT-ACSHSGLVDEGWNYFQSMKQK 234
L PDE ++L+ A + GL +E MK++
Sbjct: 455 KLDPDETCGYVLLSNAYASYGLFEEAVEQRLLMKER 490
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 233 bits (593), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 121/376 (32%), Positives = 207/376 (55%), Gaps = 38/376 (10%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKN------------------------ 36
M QRN+ +WN M+ + ++G ++ A F M E+N
Sbjct: 293 MIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAILEGRTI 352
Query: 37 ------------VVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQP 84
+V T +ID Y + G + +A +F++ EK+V++W+++I+ YVQNG+
Sbjct: 353 HGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKN 412
Query: 85 NQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAA 144
AL++F E+ ++ PD + S++ A ++ L + + +Y+ KS ++ +
Sbjct: 413 YSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRY-WSNTIILNS 471
Query: 145 LLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPD 204
L+ M A CG+++ A K F + +D+VS+ S+I ++HG G +V LF+ M+ + P+
Sbjct: 472 LVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPN 531
Query: 205 EVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELM 264
+ F +L ACS SG+VDEGW YF+SMK++YGI P +H+ CM+DL+ R+G+ A +
Sbjct: 532 KSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFL 591
Query: 265 KSM-HEPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWI 323
+ M P A WG+LL A + H D + E A Q+F++E N Y+LL N+YA A RW
Sbjct: 592 EEMPFVPTARIWGSLLNASRNHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWE 651
Query: 324 DVSLVRSRMRERSVQK 339
DV+ ++ M + + +
Sbjct: 652 DVNRIKLLMESKGISR 667
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/328 (23%), Positives = 149/328 (45%), Gaps = 49/328 (14%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAM------PEK------------------- 35
MP+R++ SWN+M+ G++ GD S+ +F M P++
Sbjct: 191 MPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMG 250
Query: 36 ---------------NVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQ 80
+V+ T+++D Y+K G+++ A +F ++++VAW+ +I Y +
Sbjct: 251 KEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYAR 310
Query: 81 NGQPNQALKVFLEMESKN-VKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQD 139
NG+ A F +M +N ++PD ++L+ A++ L + + Y + L
Sbjct: 311 NGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAILE----GRTIHGYAMRRGF-LPHM 365
Query: 140 HVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLME 199
+ AL+DM +CG + A +F M +++++S+ S+I +G A+ LF +
Sbjct: 366 VLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDS 425
Query: 200 GLVPDEVAFTIILTACSHSGLVDEGWN-YFQSMKQKYGISPSPDHFACMVDLLSRSGHLG 258
LVPD IL A + S + EG + +K +Y + +V + + G L
Sbjct: 426 SLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYW--SNTIILNSLVHMYAMCGDLE 483
Query: 259 DAYELMKSMHEPHAGAWGALLGACKLHG 286
DA + + +W +++ A +HG
Sbjct: 484 DARKCFNHILLKDVVSWNSIIMAYAVHG 511
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 117/241 (48%), Gaps = 6/241 (2%)
Query: 42 TMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKP 101
++I Y K G A +FE+ E+D+V+W+++ISGY+ G +L +F EM KP
Sbjct: 170 SLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKP 229
Query: 102 DEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKL 161
D F +S + A S + ++ + + + +S I+ V+ ++LDM +K G + A ++
Sbjct: 230 DRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERI 289
Query: 162 FKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLME-GLVPDEVAFTIILTACSHSGL 220
F M +R++V++ MI + +G DA F M + GL PD + +L A +
Sbjct: 290 FNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASA---- 345
Query: 221 VDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLG 280
+ EG + G P ++D+ G L A + M E + +W +++
Sbjct: 346 ILEG-RTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIA 404
Query: 281 A 281
A
Sbjct: 405 A 405
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 116/261 (44%), Gaps = 1/261 (0%)
Query: 26 RGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPN 85
R + + N + T + G+A + M A LF++ + D W+ +I G+ G
Sbjct: 53 RDRYKVTKQVNDPALTRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYI 112
Query: 86 QALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAAL 145
+A++ + M VK D F ++ + + + LE + + + V K + +V +L
Sbjct: 113 EAVQFYSRMVFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGF-VSDVYVCNSL 171
Query: 146 LDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDE 205
+ + K G A K+F+EMP+RD+VS+ SMI G G G ++ LF ML G PD
Sbjct: 172 ISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDR 231
Query: 206 VAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMK 265
+ L ACSH G + + ++D+ S+ G + A +
Sbjct: 232 FSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFN 291
Query: 266 SMHEPHAGAWGALLGACKLHG 286
M + + AW ++G +G
Sbjct: 292 GMIQRNIVAWNVMIGCYARNG 312
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 232 bits (592), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 122/349 (34%), Positives = 199/349 (57%), Gaps = 5/349 (1%)
Query: 3 QRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQ 62
+ +V A++ ++ G++ A VFD MPE+N V++ MI G GD A E+
Sbjct: 155 ESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFLEK 214
Query: 63 ATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKN-VKPDEFILVSLMSATSQLGHLEL 121
+ VV+W+ +I GY + +P +A+ +F M + + +KP+E +++++ A LG L++
Sbjct: 215 MPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDLKM 274
Query: 122 AQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMP--KRDLVSYCSMIQG 179
V +YV K V +L+D AKCG + A K F E+P +++LVS+ +MI
Sbjct: 275 CGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISA 334
Query: 180 LSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGW-NYFQSMKQKYGIS 238
+IHG G++AV +F M GL P+ V +L ACSH GL +E + +F +M +Y I+
Sbjct: 335 FAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNEYKIT 394
Query: 239 PSPDHFACMVDLLSRSGHLGDAYELMKSMH-EPHAGAWGALLGACKLHGDSDLGEIVANQ 297
P H+ C+VD+L R G L +A ++ + E A W LLGAC ++ D++L E V +
Sbjct: 395 PDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGACSVYDDAELAERVTRK 454
Query: 298 LFELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQKIPGCSKL 346
L ELE + +Y+L+SNI+ R++D R +M R V K+PG S++
Sbjct: 455 LMELERSHGGDYVLMSNIFCGTGRFLDAQRFRKQMDVRGVAKLPGHSQV 503
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 232 bits (591), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 131/386 (33%), Positives = 209/386 (54%), Gaps = 44/386 (11%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAM------PEKNVVSFTTM----------- 43
MP++++ +WN+M+ G+V GD S + + M P + ++ M
Sbjct: 269 MPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHG 328
Query: 44 ----------------------IDGYAKAGDMAAARFLFEQATEKDVV-AWSALISGYVQ 80
ID Y K G+ A +F + T+KDV +W+ +IS Y+
Sbjct: 329 KFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSK-TQKDVAESWNVMISSYIS 387
Query: 81 NGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDH 140
G +A++V+ +M S VKPD S++ A SQL LE + + +S+S ++ +
Sbjct: 388 VGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLE-TDEL 446
Query: 141 VIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEG 200
+++ALLDM +KCGN A ++F +PK+D+VS+ MI HG +A+ F+ M G
Sbjct: 447 LLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFG 506
Query: 201 LVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDA 260
L PD V +L+AC H+GL+DEG +F M+ KYGI P +H++CM+D+L R+G L +A
Sbjct: 507 LKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEA 566
Query: 261 YELMKSMHEP--HAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAA 318
YE+++ E +A L AC LH + LG+ +A L E P +A+ Y++L N+YA+
Sbjct: 567 YEIIQQTPETSDNAELLSTLFSACCLHLEHSLGDRIARLLVENYPDDASTYMVLFNLYAS 626
Query: 319 AERWIDVSLVRSRMRERSVQKIPGCS 344
E W VR +M+E ++K PGCS
Sbjct: 627 GESWDAARRVRLKMKEMGLRKKPGCS 652
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/354 (24%), Positives = 157/354 (44%), Gaps = 43/354 (12%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMP----EKNVVSFTT-------------- 42
MP+R+VASWN ++ F + G+ A +F M E N VS T
Sbjct: 168 MPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERG 227
Query: 43 ---------------------MIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQN 81
++D Y K + AR +F++ K +VAW+++I GYV
Sbjct: 228 KEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAK 287
Query: 82 GQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHV 141
G +++ M + +P + L S++ A S+ +L +++ YV +S ++ +V
Sbjct: 288 GDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVN-ADIYV 346
Query: 142 IAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGL 201
+L+D+ KCG + A +F + K S+ MI G AV +++ M+ G+
Sbjct: 347 NCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGV 406
Query: 202 VPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAY 261
PD V FT +L ACS +++G S+ + + + ++D+ S+ G+ +A+
Sbjct: 407 KPDVVTFTSVLPACSQLAALEKGKQIHLSISES-RLETDELLLSALLDMYSKCGNEKEAF 465
Query: 262 ELMKSMHEPHAGAWGALLGACKLHGDSD--LGEIVANQLFELEPQNAANYILLS 313
+ S+ + +W ++ A HG L + Q F L+P +LS
Sbjct: 466 RIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLS 519
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 107/183 (58%), Gaps = 1/183 (0%)
Query: 36 NVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEME 95
+VV ++++ YAK + +F++ E+DV +W+ +IS + Q+G+ +AL++F ME
Sbjct: 141 DVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRME 200
Query: 96 SKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNM 155
S +P+ L +SA S+L LE + + K +L + +V +AL+DM KC +
Sbjct: 201 SSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDE-YVNSALVDMYGKCDCL 259
Query: 156 DRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTAC 215
+ A ++F++MP++ LV++ SMI+G G + V + N M++EG P + T IL AC
Sbjct: 260 EVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMAC 319
Query: 216 SHS 218
S S
Sbjct: 320 SRS 322
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 127/258 (49%), Gaps = 6/258 (2%)
Query: 34 EKNVVSFTTMIDGYAKAGDMAAARFLFEQA-TEKDVVAWSALISGYVQNGQPNQALKVFL 92
++VV ++I+ Y D +AR +FE DV W++L+SGY +N + L+VF
Sbjct: 36 RRDVVLCKSLINVYFTCKDHCSARHVFENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFK 95
Query: 93 EMESKNV-KPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIA-ALLDMNA 150
+ + ++ PD F +++ A LG L + + + V KS D V+A +L+ M A
Sbjct: 96 RLLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVC--DVVVASSLVGMYA 153
Query: 151 KCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTI 210
K + +L++F EMP+RD+ S+ ++I G E A+ LF M G P+ V+ T+
Sbjct: 154 KFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTV 213
Query: 211 ILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEP 270
++ACS ++ G + +K G + +VD+ + L A E+ + M
Sbjct: 214 AISACSRLLWLERGKEIHRKCVKK-GFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRK 272
Query: 271 HAGAWGALLGACKLHGDS 288
AW +++ GDS
Sbjct: 273 SLVAWNSMIKGYVAKGDS 290
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 231 bits (590), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 122/333 (36%), Positives = 196/333 (58%), Gaps = 11/333 (3%)
Query: 22 LSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQN 81
+ SA +FD P+++VV++ +IDG KA ++ AR LF+ +D+V+W++LISGY Q
Sbjct: 168 IDSALQLFDENPQRDVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQM 227
Query: 82 GQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHV 141
+A+K+F EM + +KPD +VS +SA +Q G + + + Y + + + +
Sbjct: 228 NHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDS-FL 286
Query: 142 IAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGL 201
L+D AKCG +D A+++F+ + L ++ +MI GL++HG GE V F M+ G+
Sbjct: 287 ATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGI 346
Query: 202 VPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAY 261
PD V F +L CSHSGLVDE N F M+ Y ++ H+ CM DLL R+G + +A
Sbjct: 347 KPDGVTFISVLVGCSHSGLVDEARNLFDQMRSLYDVNREMKHYGCMADLLGRAGLIEEAA 406
Query: 262 ELMKSMHEPHAG-------AWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSN 314
E+++ M P G AW LLG C++HG+ ++ E AN++ L P++ Y ++
Sbjct: 407 EMIEQM--PKDGGNREKLLAWSGLLGGCRIHGNIEIAEKAANRVKALSPEDGGVYKVMVE 464
Query: 315 IYAAAERWIDVSLVRSRM-RERSVQKIPGCSKL 346
+YA AERW +V VR + R++ V+K G SK+
Sbjct: 465 MYANAERWEEVVKVREIIDRDKKVKKNVGFSKV 497
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 231 bits (589), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 113/308 (36%), Positives = 198/308 (64%), Gaps = 2/308 (0%)
Query: 36 NVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEME 95
N+ T ++D YAK G + A +FE +K V WS++++GYVQN +AL ++ +
Sbjct: 196 NLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQ 255
Query: 96 SKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNM 155
+++ ++F L S++ A S L L + + + + KS V ++ +DM AKCG++
Sbjct: 256 RMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFG-SNVFVASSAVDMYAKCGSL 314
Query: 156 DRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTAC 215
+ +F E+ +++L + ++I G + H ++ + LF M +G+ P+EV F+ +L+ C
Sbjct: 315 RESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVC 374
Query: 216 SHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSM-HEPHAGA 274
H+GLV+EG +F+ M+ YG+SP+ H++CMVD+L R+G L +AYEL+KS+ +P A
Sbjct: 375 GHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASI 434
Query: 275 WGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRE 334
WG+LL +C+++ + +L E+ A +LFELEP+NA N++LLSNIYAA ++W +++ R +R+
Sbjct: 435 WGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKLLRD 494
Query: 335 RSVQKIPG 342
V+K+ G
Sbjct: 495 CDVKKVRG 502
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 126/253 (49%), Gaps = 2/253 (0%)
Query: 34 EKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLE 93
E +V +I+ Y+K G + AR +F+ E+ +V+W+ +I Y +N ++AL +FLE
Sbjct: 93 EGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLE 152
Query: 94 MESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCG 153
M ++ K EF + S++SA + + K+ IDL +V ALLD+ AKCG
Sbjct: 153 MRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNL-YVGTALLDLYAKCG 211
Query: 154 NMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILT 213
+ A+++F+ M + V++ SM+ G + E+A+ L+ L ++ + ++
Sbjct: 212 MIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVIC 271
Query: 214 ACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAG 273
ACS+ + EG ++ K G + + VD+ ++ G L ++Y + + E +
Sbjct: 272 ACSNLAALIEG-KQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLE 330
Query: 274 AWGALLGACKLHG 286
W ++ H
Sbjct: 331 LWNTIISGFAKHA 343
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 231 bits (589), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 114/303 (37%), Positives = 185/303 (61%), Gaps = 2/303 (0%)
Query: 43 MIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPD 102
++D Y K +M A +FE KDVV+W+++IS NG ++A+++F M + D
Sbjct: 527 LVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSAD 586
Query: 103 EFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLF 162
L+ ++SA + L L + + Y+ + L+ + A++DM A CG++ A +F
Sbjct: 587 SVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGS-IAVAVVDMYACCGDLQSAKAVF 645
Query: 163 KEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVD 222
+ ++ L+ Y SMI +HGCG+ AV LF+ M E + PD ++F +L ACSH+GL+D
Sbjct: 646 DRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLD 705
Query: 223 EGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMH-EPHAGAWGALLGA 281
EG + + M+ +Y + P P+H+ C+VD+L R+ + +A+E +K M EP A W ALL A
Sbjct: 706 EGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAA 765
Query: 282 CKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQKIP 341
C+ H + ++GEI A +L ELEP+N N +L+SN++A RW DV VR++M+ ++K P
Sbjct: 766 CRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHP 825
Query: 342 GCS 344
GCS
Sbjct: 826 GCS 828
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 130/277 (46%), Gaps = 51/277 (18%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNV----VSFTTMIDG---------- 46
MP R +WN M+ +V +G+ +SA ++ M + V SF ++
Sbjct: 142 MPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSG 201
Query: 47 -------------------------YAKAGDMAAARFLFEQATEK-DVVAWSALISGYVQ 80
YAK D++AAR LF+ EK D V W++++S Y
Sbjct: 202 SELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYST 261
Query: 81 NGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDH 140
+G+ + L++F EM P+ + +VS ++A + +L + + + V KSS + +
Sbjct: 262 SGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELY 321
Query: 141 VIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEG 200
V AL+ M +CG M +A ++ ++M D+V++ S+I+G + ++A+ F+ M+ G
Sbjct: 322 VCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAG 381
Query: 201 LVPDEVAFTIILTACS-----------HSGLVDEGWN 226
DEV+ T I+ A H+ ++ GW+
Sbjct: 382 HKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWD 418
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 130/254 (51%), Gaps = 5/254 (1%)
Query: 34 EKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLE 93
+ N+ T+ID Y+K F + +KD+++W+ +I+GY QN +AL++F +
Sbjct: 418 DSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRD 477
Query: 94 MESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIA-ALLDMNAKC 152
+ K ++ DE IL S++ A+S L + + + + ++ + + D VI L+D+ KC
Sbjct: 478 VAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGL---LDTVIQNELVDVYGKC 534
Query: 153 GNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIIL 212
NM A ++F+ + +D+VS+ SMI +++G +AV LF M+ GL D VA IL
Sbjct: 535 RNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCIL 594
Query: 213 TACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHA 272
+A + +++G + +K G +VD+ + G L A + +
Sbjct: 595 SAAASLSALNKGREIHCYLLRK-GFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGL 653
Query: 273 GAWGALLGACKLHG 286
+ +++ A +HG
Sbjct: 654 LQYTSMINAYGMHG 667
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 109/241 (45%), Gaps = 16/241 (6%)
Query: 47 YAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFIL 106
Y K G + A +F++ ++ AW+ +I YV NG+P AL ++ M + V
Sbjct: 126 YGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSF 185
Query: 107 VSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMP 166
+L+ A ++L + + S + K ++ AL+ M AK ++ A +LF
Sbjct: 186 PALLKACAKLRDIRSGSELHSLLVKLGYH-STGFIVNALVSMYAKNDDLSAARRLFDGFQ 244
Query: 167 KR-DLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGW 225
++ D V + S++ S G + + LF M M G P+ LTAC +G+
Sbjct: 245 EKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTAC-------DGF 297
Query: 226 NYFQSMKQKYG-ISPSPDH----FAC--MVDLLSRSGHLGDAYELMKSMHEPHAGAWGAL 278
+Y + K+ + + S H + C ++ + +R G + A +++ M+ W +L
Sbjct: 298 SYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSL 357
Query: 279 L 279
+
Sbjct: 358 I 358
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 88/210 (41%), Gaps = 20/210 (9%)
Query: 80 QNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQD 139
+N P +A LE+ K A SQ + + S + K+ + D
Sbjct: 75 ENNSPVEAFAYVLELCGKR------------RAVSQ------GRQLHSRIFKTFPSFELD 116
Query: 140 HVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLME 199
+ L+ M KCG++D A K+F EMP R ++ +MI +G A+ L+ +M +E
Sbjct: 117 FLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVE 176
Query: 200 GLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGD 259
G+ +F +L AC+ + G + S+ K G + +V + +++ L
Sbjct: 177 GVPLGLSSFPALLKACAKLRDIRSG-SELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSA 235
Query: 260 AYELMKSMHEP-HAGAWGALLGACKLHGDS 288
A L E A W ++L + G S
Sbjct: 236 ARRLFDGFQEKGDAVLWNSILSSYSTSGKS 265
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 231 bits (588), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 133/334 (39%), Positives = 195/334 (58%), Gaps = 4/334 (1%)
Query: 16 FVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALI 75
+ K G L+SA+ VFD++ KN +S+T M+ GYAK+G A LF K++ +W+ALI
Sbjct: 150 YAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALI 209
Query: 76 SGYVQNGQPNQALKVFLEMESKNVKP-DEFILVSLMSATSQLGHLELAQWVDSYVSKSSI 134
SG+VQ+G+ +A VF EM + V D +L S++ A + L + V V
Sbjct: 210 SGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGF 269
Query: 135 DLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFN 194
D + AL+DM AKC ++ A +F M RD+VS+ S+I G++ HG E A+ L++
Sbjct: 270 D-SCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYD 328
Query: 195 SMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRS 254
M+ G+ P+EV F ++ ACSH G V++G FQSM + YGI PS H+ C++DLL RS
Sbjct: 329 DMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRS 388
Query: 255 GHLGDAYELMKSM-HEPHAGAWGALLGACKLHGDSDLGEIVANQLF-ELEPQNAANYILL 312
G L +A L+ +M P W ALL ACK G +G +A+ L + ++ + YILL
Sbjct: 389 GLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRIADHLVSSFKLKDPSTYILL 448
Query: 313 SNIYAAAERWIDVSLVRSRMRERSVQKIPGCSKL 346
SNIYA+A W VS R ++ E V+K PG S +
Sbjct: 449 SNIYASASLWGKVSEARRKLGEMEVRKDPGHSSV 482
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 112/210 (53%), Gaps = 13/210 (6%)
Query: 27 GVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQ 86
G+ P N T+++ Y K G + A +F++ +D +AW+++++ Q +
Sbjct: 33 GIVQCCPLAN-----TLVNVYGKCGAASHALQVFDEMPHRDHIAWASVLTALNQANLSGK 87
Query: 87 ALKVFLEMESKN-VKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVI-AA 144
L VF + S + ++PD+F+ +L+ A + LG ++ + V + S + D V+ ++
Sbjct: 88 TLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHCHFIVS--EYANDEVVKSS 145
Query: 145 LLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPD 204
L+DM AKCG ++ A +F + ++ +S+ +M+ G + G E+A+ LF + ++ L
Sbjct: 146 LVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNL--- 202
Query: 205 EVAFTIILTACSHSGLVDEGWNYFQSMKQK 234
++T +++ SG E ++ F M+++
Sbjct: 203 -YSWTALISGFVQSGKGLEAFSVFTEMRRE 231
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 231 bits (588), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 127/339 (37%), Positives = 202/339 (59%), Gaps = 5/339 (1%)
Query: 10 NAMLCGFVKDGDLSSARGVFDAMPEKN--VVSFTTMIDGYAKAGDMAAARFLFEQATEKD 67
NA++ + + G + +AR + + K+ + FT ++DGY K GDM A+ +F ++D
Sbjct: 318 NALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRD 377
Query: 68 VVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDS 127
VVAW+A+I GY Q+G +A+ +F M +P+ + L +++S S L L + +
Sbjct: 378 VVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHG 437
Query: 128 YVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMP-KRDLVSYCSMIQGLSIHGCG 186
KS ++ V AL+ M AK GN+ A + F + +RD VS+ SMI L+ HG
Sbjct: 438 SAVKSG-EIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHA 496
Query: 187 EDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFAC 246
E+A+ LF +MLMEGL PD + + + +AC+H+GLV++G YF MK I P+ H+AC
Sbjct: 497 EEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYAC 556
Query: 247 MVDLLSRSGHLGDAYELMKSMH-EPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQN 305
MVDL R+G L +A E ++ M EP WG+LL AC++H + DLG++ A +L LEP+N
Sbjct: 557 MVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPEN 616
Query: 306 AANYILLSNIYAAAERWIDVSLVRSRMRERSVQKIPGCS 344
+ Y L+N+Y+A +W + + +R M++ V+K G S
Sbjct: 617 SGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFS 655
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 85/342 (24%), Positives = 159/342 (46%), Gaps = 67/342 (19%)
Query: 10 NAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVV 69
N ++ + K G AR +FD MP + S+ T++ Y+K GDM + F+Q ++D V
Sbjct: 53 NNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSV 112
Query: 70 AWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYV 129
+W+ +I GY GQ ++A++V +M + ++P +F L +++++ + +E + V S++
Sbjct: 113 SWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFI 172
Query: 130 SKSSIDLQQDHVIA-ALLDMNAKCGN-------------------------------MDR 157
K + L+ + ++ +LL+M AKCG+ MD
Sbjct: 173 VK--LGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDL 230
Query: 158 ALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLV-PDEVAFTIILTACS 216
A+ F++M +RD+V++ SMI G + G A+ +F+ ML + L+ PD +L+AC+
Sbjct: 231 AMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACA 290
Query: 217 -----------HSGLVDEGW-------NYFQSMKQKYGISPSP--------------DHF 244
HS +V G+ N SM + G + + F
Sbjct: 291 NLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGF 350
Query: 245 ACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHG 286
++D + G + A + S+ + AW A++ + HG
Sbjct: 351 TALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHG 392
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 88/336 (26%), Positives = 161/336 (47%), Gaps = 51/336 (15%)
Query: 5 NVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQAT 64
NV+ N++L + K GD A+ VFD M +++ S+ MI + + G M A FEQ
Sbjct: 180 NVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMA 239
Query: 65 EKDVVAWSALISGYVQNGQPNQALKVFLEMESKN-VKPDEFILVSLMSATSQLGHLELAQ 123
E+D+V W+++ISG+ Q G +AL +F +M + + PD F L S++SA + L L + +
Sbjct: 240 ERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGK 299
Query: 124 WVDSYVSKSSIDLQQDHVIAALLDMNAKC------------------------------- 152
+ S++ + D+ V+ AL+ M ++C
Sbjct: 300 QIHSHIVTTGFDI-SGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYI 358
Query: 153 --GNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTI 210
G+M++A +F + RD+V++ +MI G HG +A+ LF SM+ G P+
Sbjct: 359 KLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAA 418
Query: 211 ILTACSHSGLVDEGWNYFQSMKQK---YGISPSPDHFACMVDLLSRSGHLGD---AYELM 264
+L+ S + G S + Y +S S ++ + +++G++ A++L+
Sbjct: 419 MLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSN----ALITMYAKAGNITSASRAFDLI 474
Query: 265 KSMHEPHAGAWGALLGACKLHGDSDLGEIVANQLFE 300
+ E +W +++ A HG ++ A +LFE
Sbjct: 475 RC--ERDTVSWTSMIIALAQHGHAE----EALELFE 504
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 230 bits (587), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 119/347 (34%), Positives = 202/347 (58%), Gaps = 10/347 (2%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNV----VSFTTMIDGYAKAGDMAAA 56
M +N+ +WN+++ G L A + M ++ + +++ ++ GYA G A
Sbjct: 286 MDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKA 345
Query: 57 RFLFEQATEK----DVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSA 112
+ + EK +VV+W+A+ SG +NG ALKVF++M+ + V P+ + +L+
Sbjct: 346 LDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKI 405
Query: 113 TSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVS 172
L L + V + + ++ + +V AL+DM K G++ A+++F + + L S
Sbjct: 406 LGCLSLLHSGKEVHGFCLRKNL-ICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLAS 464
Query: 173 YCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMK 232
+ M+ G ++ G GE+ + F+ ML G+ PD + FT +L+ C +SGLV EGW YF M+
Sbjct: 465 WNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMR 524
Query: 233 QKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMH-EPHAGAWGALLGACKLHGDSDLG 291
+YGI P+ +H +CMVDLL RSG+L +A++ +++M +P A WGA L +CK+H D +L
Sbjct: 525 SRYGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQTMSLKPDATIWGAFLSSCKIHRDLELA 584
Query: 292 EIVANQLFELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQ 338
EI +L LEP N+ANY+++ N+Y+ RW DV +R+ MR V+
Sbjct: 585 EIAWKRLQVLEPHNSANYMMMINLYSNLNRWEDVERIRNLMRNNRVR 631
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 144/275 (52%), Gaps = 6/275 (2%)
Query: 3 QRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQ 62
+ NV+ N+++ + ++G L +R VF++M ++N+ S+ +++ Y K G + A L ++
Sbjct: 121 ESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDE 180
Query: 63 ----ATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGH 118
+ D+V W++L+SGY G A+ V M+ +KP + SL+ A ++ GH
Sbjct: 181 MEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGH 240
Query: 119 LELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQ 178
L+L + + Y+ ++ + +V L+DM K G + A +F M +++V++ S++
Sbjct: 241 LKLGKAIHGYILRNQL-WYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVS 299
Query: 179 GLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGIS 238
GLS +DA L M EG+ PD + + + + + G ++ + MK+K G++
Sbjct: 300 GLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEK-GVA 358
Query: 239 PSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAG 273
P+ + + S++G+ +A ++ M E G
Sbjct: 359 PNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVG 393
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 111/222 (50%), Gaps = 6/222 (2%)
Query: 47 YAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFIL 106
Y + + A LF++ ++D +AW+ ++ +++G +A+++F EM+ K + +
Sbjct: 33 YGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTM 92
Query: 107 VSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMP 166
V L+ S + + YV + ++ + +L+ M ++ G ++ + K+F M
Sbjct: 93 VKLLQVCSNKEGFAEGRQIHGYVLRLGLE-SNVSMCNSLIVMYSRNGKLELSRKVFNSMK 151
Query: 167 KRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWN 226
R+L S+ S++ + G +DA+ L + M + GL PD V + +L+ + GL +
Sbjct: 152 DRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIA 211
Query: 227 YFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMH 268
+ M Q G+ PS + ++ ++ GHL +L K++H
Sbjct: 212 VLKRM-QIAGLKPSTSSISSLLQAVAEPGHL----KLGKAIH 248
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 89/205 (43%), Gaps = 4/205 (1%)
Query: 131 KSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAV 190
K +D V++A + +C ++ A KLF EMPKRD +++ ++ G E AV
Sbjct: 15 KRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNLRSGNWEKAV 74
Query: 191 RLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDL 250
LF M G + +L CS+ EG + G+ + ++ +
Sbjct: 75 ELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEG-RQIHGYVLRLGLESNVSMCNSLIVM 133
Query: 251 LSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHG--DSDLGEIVANQLFELEPQNAAN 308
SR+G L + ++ SM + + +W ++L + G D +G + ++ L+P
Sbjct: 134 YSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTW 193
Query: 309 YILLSNIYAAAERWIDVSLVRSRMR 333
LLS YA+ D V RM+
Sbjct: 194 NSLLSG-YASKGLSKDAIAVLKRMQ 217
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 230 bits (587), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 135/390 (34%), Positives = 211/390 (54%), Gaps = 45/390 (11%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSA---------RGVF--------------DAMP---- 33
M +R+V +W M+ G+ +DGD+ +A GV DA+
Sbjct: 279 MERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDG 338
Query: 34 ------------EKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQN 81
+++ T++I YAK + +F A++ WSA+I+G VQN
Sbjct: 339 KCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQN 398
Query: 82 GQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHV 141
+ AL +F M ++V+P+ L SL+ A + L L A + Y++K+ D
Sbjct: 399 ELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLD-A 457
Query: 142 IAALLDMNAKCGNMDRALKLF----KEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSML 197
L+ + +KCG ++ A K+F ++ +D+V + ++I G +HG G +A+++F M+
Sbjct: 458 ATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMV 517
Query: 198 MEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHL 257
G+ P+E+ FT L ACSHSGLV+EG F+ M + Y +H+ C+VDLL R+G L
Sbjct: 518 RSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRL 577
Query: 258 GDAYELMKSM-HEPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIY 316
+AY L+ ++ EP + WGALL AC H + LGE+ AN+LFELEP+N NY+LL+NIY
Sbjct: 578 DEAYNLITTIPFEPTSTVWGALLAACVTHENVQLGEMAANKLFELEPENTGNYVLLANIY 637
Query: 317 AAAERWIDVSLVRSRMRERSVQKIPGCSKL 346
AA RW D+ VRS M ++K PG S +
Sbjct: 638 AALGRWKDMEKVRSMMENVGLRKKPGHSTI 667
Score = 108 bits (269), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 118/241 (48%), Gaps = 12/241 (4%)
Query: 47 YAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFIL 106
Y G + AR +F+ +DV++W+ +ISGY +NG N AL +F M +++V D +
Sbjct: 162 YMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATI 221
Query: 107 VSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMP 166
VS++ L LE+ + V V + + + V AL++M KCG MD A +F M
Sbjct: 222 VSMLPVCGHLKDLEMGRNVHKLVEEKRLG-DKIEVKNALVNMYLKCGRMDEARFVFDRME 280
Query: 167 KRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDE--- 223
+RD++++ MI G + G E+A+ L M EG+ P+ V +++ C + V++
Sbjct: 281 RRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKC 340
Query: 224 --GWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGA 281
GW Q + I S ++ + ++ + + + + H G W A++
Sbjct: 341 LHGWAVRQQVYSDIIIETS------LISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAG 394
Query: 282 C 282
C
Sbjct: 395 C 395
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/331 (23%), Positives = 142/331 (42%), Gaps = 47/331 (14%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNV-------VSF------------- 40
M R+V SWN M+ G+ ++G ++ A +FD M ++V VS
Sbjct: 178 MKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMG 237
Query: 41 -------------------TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQN 81
+++ Y K G M ARF+F++ +DV+ W+ +I+GY ++
Sbjct: 238 RNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTED 297
Query: 82 GQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHV 141
G AL++ M+ + V+P+ + SL+S + + + + + + D +
Sbjct: 298 GDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQV--YSDII 355
Query: 142 I-AALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEG 200
I +L+ M AKC +D ++F K + ++I G + DA+ LF M E
Sbjct: 356 IETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRRED 415
Query: 201 LVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDA 260
+ P+ +L A + + + N K G S D +V + S+ G L A
Sbjct: 416 VEPNIATLNSLLPAYAALADLRQAMN-IHCYLTKTGFMSSLDAATGLVHVYSKCGTLESA 474
Query: 261 YELMKSMHEPHAGA----WGALLGACKLHGD 287
+++ + E H WGAL+ +HGD
Sbjct: 475 HKIFNGIQEKHKSKDVVLWGALISGYGMHGD 505
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 137/294 (46%), Gaps = 12/294 (4%)
Query: 5 NVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVS---FTTMIDGYAKAGDMAAARFLFE 61
+V + ++L F +S + + + VS +T+ YA G + AR LFE
Sbjct: 14 SVKQYQSLLNHFAATQSISKTKALHCHVITGGRVSGHILSTLSVTYALCGHITYARKLFE 73
Query: 62 QATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVK--PDEFILVSLMSATSQLGHL 119
+ + +++++ +I YV+ G + A+ VF+ M S+ VK PD + + A +L +
Sbjct: 74 EMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSM 133
Query: 120 ELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQG 179
+L V + +S + +V ALL M G ++ A +F M RD++S+ +MI G
Sbjct: 134 KLGLVVHGRILRSWFG-RDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISG 192
Query: 180 LSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISP 239
+G DA+ +F+ M+ E + D +L C H ++ G N + +++K +
Sbjct: 193 YYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKR-LGD 251
Query: 240 SPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHGDSDLGEI 293
+ +V++ + G + +A + M W C ++G ++ G++
Sbjct: 252 KIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITW-----TCMINGYTEDGDV 300
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 102/241 (42%), Gaps = 49/241 (20%)
Query: 140 HVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLME 199
H+++ L A CG++ A KLF+EMP+ L+SY +I+ G DA+ +F M+ E
Sbjct: 50 HILSTLSVTYALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSE 109
Query: 200 GL--VPDEVAFTIILTACSH-----SGLVDEG-----W--------NYFQSMKQKYG-IS 238
G+ VPD + + A GLV G W N +M +G +
Sbjct: 110 GVKCVPDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVE 169
Query: 239 PSPDHFACM--VDLLS---------RSGHLGDAYELM-----KSMHEPHAGAWGALLGAC 282
+ D F M D++S R+G++ DA + +S+ HA ++L C
Sbjct: 170 MARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIV-SMLPVC 228
Query: 283 KLHGDSDLGEIVANQLFE------LEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERS 336
D ++G V + E +E +NA L N+Y R + V RM R
Sbjct: 229 GHLKDLEMGRNVHKLVEEKRLGDKIEVKNA-----LVNMYLKCGRMDEARFVFDRMERRD 283
Query: 337 V 337
V
Sbjct: 284 V 284
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 229 bits (585), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 120/346 (34%), Positives = 194/346 (56%), Gaps = 4/346 (1%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLF 60
M R+ SWN M+ G+V + A +F MP ++ S+ M+ GYA G++ AR F
Sbjct: 307 MKDRDTISWNTMIDGYVHVSRMEDAFALFSEMPNRDAHSWNMMVSGYASVGNVELARHYF 366
Query: 61 EQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLE 120
E+ EK V+W+++I+ Y +N +A+ +F+ M + KPD L SL+SA++ L +L
Sbjct: 367 EKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLR 426
Query: 121 LAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMP-KRDLVSYCSMIQG 179
L + V K+ I H AL+ M ++CG + + ++F EM KR+++++ +MI G
Sbjct: 427 LGMQMHQIVVKTVIPDVPVH--NALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGG 484
Query: 180 LSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISP 239
+ HG +A+ LF SM G+ P + F +L AC+H+GLVDE F SM Y I P
Sbjct: 485 YAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVYKIEP 544
Query: 240 SPDHFACMVDLLSRSGHLGDAYELMKSM-HEPHAGAWGALLGACKLHGDSDLGEIVANQL 298
+H++ +V++ S G +A ++ SM EP WGALL AC+++ + L + A +
Sbjct: 545 QMEHYSSLVNVTSGQGQFEEAMYIITSMPFEPDKTVWGALLDACRIYNNVGLAHVAAEAM 604
Query: 299 FELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQKIPGCS 344
LEP+++ Y+LL N+YA W + S VR M + ++K G S
Sbjct: 605 SRLEPESSTPYVLLYNMYADMGLWDEASQVRMNMESKRIKKERGSS 650
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 94/326 (28%), Positives = 152/326 (46%), Gaps = 41/326 (12%)
Query: 1 MPQRNVASWNAMLCGFVKDGD---LSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAAR 57
MP+R+V +WN M+ G+V G L AR +FD MP ++ S+ TMI GYAK + A
Sbjct: 97 MPKRDVVTWNTMISGYVSCGGIRFLEEARKLFDEMPSRDSFSWNTMISGYAKNRRIGEAL 156
Query: 58 FLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLG 117
LFE+ E++ V+WSA+I+G+ QNG+ + A+ +F +M K+ P L +L++ +
Sbjct: 157 LLFEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSP----LCALVAGLIKNE 212
Query: 118 HLELAQWVDSYVSKSSIDLQQDHVIA--ALLDMNAKCGNMDRALKLFKEMPKRDLVSYCS 175
L A WV S + ++D V A L+ + G ++ A LF ++P DL
Sbjct: 213 RLSEAAWVLGQYG-SLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIP--DL----- 264
Query: 176 MIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKY 235
CG+D F E + V++ ++ A G V F MK +
Sbjct: 265 ---------CGDDHGGEFR----ERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDRD 311
Query: 236 GISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHGDSDLGEIVA 295
IS + M+D + DA+ L M A +W ++ G+ +L A
Sbjct: 312 TIS-----WNTMIDGYVHVSRMEDAFALFSEMPNRDAHSWNMMVSGYASVGNVEL----A 362
Query: 296 NQLFELEPQNAANYILLSNIYAAAER 321
FE P+ + + ++I AA E+
Sbjct: 363 RHYFEKTPEK--HTVSWNSIIAAYEK 386
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 96/209 (45%), Gaps = 53/209 (25%)
Query: 10 NAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVV 69
N L ++ G ++ AR +F+ + +N V++ TMI GY K +M AR LF+ ++DVV
Sbjct: 44 NKELNQMIRSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKRDVV 103
Query: 70 AWSALISGYVQNGQPN---QALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVD 126
W+ +ISGYV G +A K+F EM S+ D F +++S
Sbjct: 104 TWNTMISGYVSCGGIRFLEEARKLFDEMPSR----DSFSWNTMISGY------------- 146
Query: 127 SYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCG 186
AK + AL LF++MP+R+ VS+ +MI G +G
Sbjct: 147 -----------------------AKNRRIGEALLLFEKMPERNAVSWSAMITGFCQNGEV 183
Query: 187 EDAVRLFNSM----------LMEGLVPDE 205
+ AV LF M L+ GL+ +E
Sbjct: 184 DSAVVLFRKMPVKDSSPLCALVAGLIKNE 212
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 229 bits (584), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 127/378 (33%), Positives = 203/378 (53%), Gaps = 40/378 (10%)
Query: 9 WNAMLCGFVKDGDLSSARGVFDAMP----EKNVVSFTTMIDG------------------ 46
W AM+ G+ +G ++ A +F M + N V+ +++ G
Sbjct: 311 WTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSI 370
Query: 47 ----------------YAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKV 90
YAK A+++FE +EKD+VAW+++ISG+ QNG ++AL +
Sbjct: 371 KVGIWDTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFL 430
Query: 91 FLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQD-HVIAALLDMN 149
F M S++V P+ + SL SA + LG L + + +Y K HV ALLD
Sbjct: 431 FHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFY 490
Query: 150 AKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFT 209
AKCG+ A +F + +++ +++ +MI G G ++ LF ML + P+E FT
Sbjct: 491 AKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFT 550
Query: 210 IILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMH- 268
IL+AC H+G+V+EG YF SM + Y +PS H+ CMVD+L+R+G L A ++++ M
Sbjct: 551 SILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPI 610
Query: 269 EPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWIDVSLV 328
+P +GA L C +H DLGEIV ++ +L P +A+ Y+L+SN+YA+ RW V
Sbjct: 611 QPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLYASDGRWNQAKEV 670
Query: 329 RSRMRERSVQKIPGCSKL 346
R+ M++R + KI G S +
Sbjct: 671 RNLMKQRGLSKIAGHSTM 688
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 94/358 (26%), Positives = 167/358 (46%), Gaps = 48/358 (13%)
Query: 4 RNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVS------------------------ 39
RNV W +M+ G+VK+ +F+ M E NV+
Sbjct: 205 RNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWF 264
Query: 40 ---------------FTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQP 84
T+++D Y K GD++ AR +F + + D+V W+A+I GY NG
Sbjct: 265 HGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSV 324
Query: 85 NQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAA 144
N+AL +F +M+ +KP+ + S++S + +LEL + V K + + +V A
Sbjct: 325 NEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIK--VGIWDTNVANA 382
Query: 145 LLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPD 204
L+ M AKC A +F+ ++D+V++ S+I G S +G +A+ LF+ M E + P+
Sbjct: 383 LVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPN 442
Query: 205 EVAFTIILTACSHSGLVDEGWN-YFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYEL 263
V + +AC+ G + G + + S+K + S S ++D ++ G A +
Sbjct: 443 GVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLI 502
Query: 264 MKSMHEPHAGAWGALLGACKLHGDSDLGEIVANQLFE--LEPQNAANYILLSNIYAAA 319
++ E + W A++G GD+ I + +LFE L+ Q N ++I +A
Sbjct: 503 FDTIEEKNTITWSAMIGGYGKQGDT----IGSLELFEEMLKKQQKPNESTFTSILSAC 556
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 106/191 (55%), Gaps = 4/191 (2%)
Query: 32 MPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVF 91
+P + V T ++D YAK G++ +A +F T ++VV W+++I+GYV+N + L +F
Sbjct: 171 VPSFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLF 230
Query: 92 LEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAK 151
M NV +E+ +L+ A ++L L +W + KS I+L ++ +LLDM K
Sbjct: 231 NRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSS-CLVTSLLDMYVK 289
Query: 152 CGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTII 211
CG++ A ++F E DLV + +MI G + +G +A+ LF M + P+ V +
Sbjct: 290 CGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASV 349
Query: 212 LTACSHSGLVD 222
L+ C GL++
Sbjct: 350 LSGC---GLIE 357
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 134/291 (46%), Gaps = 60/291 (20%)
Query: 3 QRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNV------------------------- 37
++++ +WN+++ GF ++G + A +F M ++V
Sbjct: 405 EKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSS 464
Query: 38 -------VSF---------TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQN 81
+ F T ++D YAK GD +AR +F+ EK+ + WSA+I GY +
Sbjct: 465 LHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQ 524
Query: 82 GQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHL-ELAQWVDSYVSKSSIDLQQDH 140
G +L++F EM K KP+E S++SA G + E ++ S + H
Sbjct: 525 GDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKH 584
Query: 141 VIAALLDMNAKCGNMDRALKLFKEMP-KRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLME 199
++DM A+ G +++AL + ++MP + D+ + G +HGCG + ++++
Sbjct: 585 Y-TCMVDMLARAGELEQALDIIEKMPIQPDVRCF-----GAFLHGCGMHSRFDLGEIVIK 638
Query: 200 GLV---PDEVAFTIILTACSHSGLVDEGWNYFQS----MKQKYGISPSPDH 243
++ PD+ ++ ++++ S D WN + MKQ+ G+S H
Sbjct: 639 KMLDLHPDDASYYVLVSNLYAS---DGRWNQAKEVRNLMKQR-GLSKIAGH 685
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 110/240 (45%), Gaps = 5/240 (2%)
Query: 41 TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVK 100
T ++ Y G AR +F+Q E D W ++ Y N + + +K++ + +
Sbjct: 80 TKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFR 139
Query: 101 PDEFILVSLMSATSQLGHLELAQWVDSYVSK-SSIDLQQDHVIAALLDMNAKCGNMDRAL 159
D+ + + A ++L L+ + + + K S D + V+ LLDM AKCG + A
Sbjct: 140 YDDIVFSKALKACTELQDLDNGKKIHCQLVKVPSFD---NVVLTGLLDMYAKCGEIKSAH 196
Query: 160 KLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSG 219
K+F ++ R++V + SMI G + E+ + LFN M ++ +E + ++ AC+
Sbjct: 197 KVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLS 256
Query: 220 LVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALL 279
+ +G +F K GI S ++D+ + G + +A + W A++
Sbjct: 257 ALHQG-KWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMI 315
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 228 bits (582), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 128/386 (33%), Positives = 211/386 (54%), Gaps = 41/386 (10%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMP-EKNVVSFT------------------ 41
MP R+V SW ++ GF + G A F M E N+ ++
Sbjct: 167 MPVRDVVSWTGIITGFTRTGLYKEALDTFSKMDVEPNLATYVCVLVSSGRVGCLSLGKGI 226
Query: 42 -----------------TMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQP 84
+ID Y K ++ A +F + +KD V+W+++ISG V +
Sbjct: 227 HGLILKRASLISLETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERS 286
Query: 85 NQALKVFLEME-SKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIA 143
+A+ +F M+ S +KPD IL S++SA + LG ++ +WV Y+ + I H+
Sbjct: 287 KEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDT-HIGT 345
Query: 144 ALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVP 203
A++DM AKCG ++ AL++F + +++ ++ +++ GL+IHG G +++R F M+ G P
Sbjct: 346 AIVDMYAKCGYIETALEIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKP 405
Query: 204 DEVAFTIILTACSHSGLVDEGWNYFQSMKQK-YGISPSPDHFACMVDLLSRSGHLGDAYE 262
+ V F L AC H+GLVDEG YF MK + Y + P +H+ CM+DLL R+G L +A E
Sbjct: 406 NLVTFLAALNACCHTGLVDEGRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEALE 465
Query: 263 LMKSMH-EPHAGAWGALLGACKLHGD-SDLGEIVANQLFELEPQNAANYILLSNIYAAAE 320
L+K+M +P GA+L ACK G +L + + + ++E +++ Y+LLSNI+AA
Sbjct: 466 LVKAMPVKPDVRICGAILSACKNRGTLMELPKEILDSFLDIEFEDSGVYVLLSNIFAANR 525
Query: 321 RWIDVSLVRSRMRERSVQKIPGCSKL 346
RW DV+ +R M+ + + K+PG S +
Sbjct: 526 RWDDVARIRRLMKVKGISKVPGSSYI 551
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 134/263 (50%), Gaps = 15/263 (5%)
Query: 27 GVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQ 86
G +D + +N +++ Y G+ A +F + +DVV+W+ +I+G+ + G +
Sbjct: 136 GFYDDIYVQN-----SLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKE 190
Query: 87 ALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSK--SSIDLQQDHVIAA 144
AL F +M+ V+P+ V ++ ++ ++G L L + + + K S I L+ + A
Sbjct: 191 ALDTFSKMD---VEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGN---A 244
Query: 145 LLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSM-LMEGLVP 203
L+DM KC + A+++F E+ K+D VS+ SMI GL ++A+ LF+ M G+ P
Sbjct: 245 LIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKP 304
Query: 204 DEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYEL 263
D T +L+AC+ G VD G + GI +VD+ ++ G++ A E+
Sbjct: 305 DGHILTSVLSACASLGAVDHG-RWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEI 363
Query: 264 MKSMHEPHAGAWGALLGACKLHG 286
+ + W ALLG +HG
Sbjct: 364 FNGIRSKNVFTWNALLGGLAIHG 386
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/210 (20%), Positives = 87/210 (41%), Gaps = 5/210 (2%)
Query: 70 AWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYV 129
+++ L+S Y +P + + S PD F + A + + + + V
Sbjct: 73 SYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGKQIHGIV 132
Query: 130 SKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDA 189
+K +V +L+ CG A K+F EMP RD+VS+ +I G + G ++A
Sbjct: 133 TKMGF-YDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKEA 191
Query: 190 VRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVD 249
+ F+ M +E P+ + +L + G + G + K S + ++D
Sbjct: 192 LDTFSKMDVE---PNLATYVCVLVSSGRVGCLSLGKG-IHGLILKRASLISLETGNALID 247
Query: 250 LLSRSGHLGDAYELMKSMHEPHAGAWGALL 279
+ + L DA + + + +W +++
Sbjct: 248 MYVKCEQLSDAMRVFGELEKKDKVSWNSMI 277
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 228 bits (581), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 116/314 (36%), Positives = 191/314 (60%), Gaps = 5/314 (1%)
Query: 34 EKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLE 93
E+++ + +++ Y G++ + LF+ +K +V+W+ +I+GY+QNG P++AL VF +
Sbjct: 528 ERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQ 587
Query: 94 MESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIA-ALLDMNAKC 152
M ++ ++ + A S L L L + +Y K L+ D IA +L+DM AK
Sbjct: 588 MVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHL--LEDDAFIACSLIDMYAKN 645
Query: 153 GNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIIL 212
G++ ++ K+F + ++ S+ +MI G IHG ++A++LF M G PD++ F +L
Sbjct: 646 GSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVL 705
Query: 213 TACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELM--KSMHEP 270
TAC+HSGL+ EG Y MK +G+ P+ H+AC++D+L R+G L A ++ + E
Sbjct: 706 TACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEA 765
Query: 271 HAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWIDVSLVRS 330
G W +LL +C++H + ++GE VA +LFELEP+ NY+LLSN+YA +W DV VR
Sbjct: 766 DVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQ 825
Query: 331 RMRERSVQKIPGCS 344
RM E S++K GCS
Sbjct: 826 RMNEMSLRKDAGCS 839
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/330 (22%), Positives = 143/330 (43%), Gaps = 53/330 (16%)
Query: 3 QRNVASWNAMLCGFVKDGDLSSARGVFDAMPE---------------------------- 34
+NV SWN M+ GF +GD G FD + +
Sbjct: 355 NKNVVSWNTMVGGFSAEGD---THGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFL 411
Query: 35 ----------------KNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGY 78
N + + YAK G ++ A+ +F K V +W+ALI G+
Sbjct: 412 PSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGH 471
Query: 79 VQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQ 138
Q+ P +L L+M+ + PD F + SL+SA S+L L L + V ++ ++ ++ +
Sbjct: 472 AQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLE-RD 530
Query: 139 DHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLM 198
V ++L + CG + LF M + LVS+ ++I G +G + A+ +F M++
Sbjct: 531 LFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVL 590
Query: 199 EGLVPDEVAFTIILTACSHSGLVDEGWN-YFQSMKQKYGISPSPDHFAC-MVDLLSRSGH 256
G+ ++ + ACS + G + ++K + AC ++D+ +++G
Sbjct: 591 YGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKH---LLEDDAFIACSLIDMYAKNGS 647
Query: 257 LGDAYELMKSMHEPHAGAWGALLGACKLHG 286
+ + ++ + E +W A++ +HG
Sbjct: 648 ITQSSKVFNGLKEKSTASWNAMIMGYGIHG 677
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 124/258 (48%), Gaps = 17/258 (6%)
Query: 41 TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEM-ESKNV 99
T +I YA G +RF+F+ K++ W+A+IS Y +N ++ L+ F+EM + ++
Sbjct: 124 TRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDL 183
Query: 100 KPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRAL 159
PD F ++ A + + + + V V K+ + ++ V AL+ G + AL
Sbjct: 184 LPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGL-VEDVFVGNALVSFYGTHGFVTDAL 242
Query: 160 KLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLME----GLVPDEVAFTIILTAC 215
+LF MP+R+LVS+ SMI+ S +G E++ L M+ E +PD +L C
Sbjct: 243 QLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVC 302
Query: 216 SHS-----GLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEP 270
+ G GW + ++ ++ + ++D+ S+ G + +A + K +
Sbjct: 303 AREREIGLGKGVHGWAVKLRLDKELVLNNA------LMDMYSKCGCITNAQMIFKMNNNK 356
Query: 271 HAGAWGALLGACKLHGDS 288
+ +W ++G GD+
Sbjct: 357 NVVSWNTMVGGFSAEGDT 374
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/261 (21%), Positives = 111/261 (42%), Gaps = 46/261 (17%)
Query: 1 MPQRNVASWNAML-----CGFVKD-----GDLSSARGVFDAMPE---------------- 34
MP+RN+ SWN+M+ GF ++ G++ G MP+
Sbjct: 248 MPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCARERE 307
Query: 35 -----------------KNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISG 77
K +V ++D Y+K G + A+ +F+ K+VV+W+ ++ G
Sbjct: 308 IGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGG 367
Query: 78 YVQNGQPNQALKVFLEMES--KNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSID 135
+ G + V +M + ++VK DE +++ + L + + Y K
Sbjct: 368 FSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEF- 426
Query: 136 LQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNS 195
+ + V A + AKCG++ A ++F + + + S+ ++I G + ++
Sbjct: 427 VYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQ 486
Query: 196 MLMEGLVPDEVAFTIILTACS 216
M + GL+PD +L+ACS
Sbjct: 487 MKISGLLPDSFTVCSLLSACS 507
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 225 bits (574), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 114/304 (37%), Positives = 187/304 (61%), Gaps = 2/304 (0%)
Query: 43 MIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPD 102
I Y KAG+ AR +F++ E+ + +W+A+I G G+ N+A+++F++M+ ++PD
Sbjct: 158 FITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPD 217
Query: 103 EFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQD-HVIAALLDMNAKCGNMDRALKL 161
+F +VS+ ++ LG L LA + V ++ + + D ++ +L+DM KCG MD A +
Sbjct: 218 DFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHI 277
Query: 162 FKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLV 221
F+EM +R++VS+ SMI G + +G +A+ F M G+ P+++ F +L+AC H GLV
Sbjct: 278 FEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGGLV 337
Query: 222 DEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSM-HEPHAGAWGALLG 280
+EG YF MK ++ + P H+ C+VDLLSR G L +A ++++ M +P+ WG L+G
Sbjct: 338 EEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMG 397
Query: 281 ACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQKI 340
C+ GD ++ E VA + ELEP N Y++L+N+YA W DV VR M+ + V KI
Sbjct: 398 GCEKFGDVEMAEWVAPYMVELEPWNDGVYVVLANVYALRGMWKDVERVRKLMKTKKVAKI 457
Query: 341 PGCS 344
P S
Sbjct: 458 PAYS 461
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 94/176 (53%), Gaps = 18/176 (10%)
Query: 20 GDLSSA----RGVFDAMPEK--NVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSA 73
GDLS A + V A E+ +++ ++ID Y K G M A +FE+ +++VV+WS+
Sbjct: 232 GDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSS 291
Query: 74 LISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVS--K 131
+I GY NG +AL+ F +M V+P++ V ++SA G +E + +Y + K
Sbjct: 292 MIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGGLVEEGK---TYFAMMK 348
Query: 132 SSIDLQQ--DHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGC 185
S +L+ H ++D+ ++ G + A K+ +EMP + V M+ G + GC
Sbjct: 349 SEFELEPGLSH-YGCIVDLLSRDGQLKEAKKVVEEMPMKPNV----MVWGCLMGGC 399
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 51/239 (21%), Positives = 107/239 (44%), Gaps = 5/239 (2%)
Query: 51 GDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLM 110
GD+ +R L + W+ ++ Y+++ P A++V+L M V PD + L ++
Sbjct: 68 GDIFRSRILDQYPI---AFLWNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVI 124
Query: 111 SATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDL 170
A Q+ L + + S + + + + + + K G + A K+F E P+R L
Sbjct: 125 KAAVQIHDFTLGKELHSVAVRLGF-VGDEFCESGFITLYCKAGEFENARKVFDENPERKL 183
Query: 171 VSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQS 230
S+ ++I GL+ G +AV +F M GL PD+ + +C G + + +
Sbjct: 184 GSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKC 243
Query: 231 MKQKYGISPSPD-HFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHGDS 288
+ Q S ++D+ + G + A + + M + + +W +++ +G++
Sbjct: 244 VLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNT 302
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 81/175 (46%), Gaps = 17/175 (9%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPE----KNVVSFTTMIDGYAKAGDMAAA 56
M QRNV SW++M+ G+ +G+ A F M E N ++F ++ G +
Sbjct: 281 MRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGGLVEEG 340
Query: 57 RFLF-----EQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMS 111
+ F E E + + ++ ++GQ +A KV EM +KP+ + LM
Sbjct: 341 KTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMP---MKPNVMVWGCLMG 397
Query: 112 ATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCG---NMDRALKLFK 163
+ G +E+A+WV Y+ + ++ D V L ++ A G +++R KL K
Sbjct: 398 GCEKFGDVEMAEWVAPYMVE--LEPWNDGVYVVLANVYALRGMWKDVERVRKLMK 450
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 225 bits (573), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 113/305 (37%), Positives = 183/305 (60%), Gaps = 2/305 (0%)
Query: 41 TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVK 100
+ +ID Y K + A+ +F++ +K+VV+W+A++ GY Q G+ +A+K+FL+M+ +
Sbjct: 309 SALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGID 368
Query: 101 PDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALK 160
PD + L +SA + + LE S + + V +L+ + KCG++D + +
Sbjct: 369 PDHYTLGQAISACANVSSLEEGSQFHGKAITSGL-IHYVTVSNSLVTLYGKCGDIDDSTR 427
Query: 161 LFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGL 220
LF EM RD VS+ +M+ + G + ++LF+ M+ GL PD V T +++ACS +GL
Sbjct: 428 LFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGL 487
Query: 221 VDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSM-HEPHAGAWGALL 279
V++G YF+ M +YGI PS H++CM+DL SRSG L +A + M P A W LL
Sbjct: 488 VEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLL 547
Query: 280 GACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQK 339
AC+ G+ ++G+ A L EL+P + A Y LLS+IYA+ +W V+ +R MRE++V+K
Sbjct: 548 SACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKK 607
Query: 340 IPGCS 344
PG S
Sbjct: 608 EPGQS 612
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 84/318 (26%), Positives = 159/318 (50%), Gaps = 21/318 (6%)
Query: 12 MLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAW 71
+L + G +S A+ VF + ++N V + +++ G G + A LF + EKD V+W
Sbjct: 180 LLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLF-RGMEKDSVSW 238
Query: 72 SALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSK 131
+A+I G QNG +A++ F EM+ + +K D++ S++ A LG + + + + + +
Sbjct: 239 AAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIR 298
Query: 132 SSIDLQQDHVI--AALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDA 189
++ QDH+ +AL+DM KC + A +F M ++++VS+ +M+ G G E+A
Sbjct: 299 TNF---QDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEA 355
Query: 190 VRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFAC--- 246
V++F M G+ PD ++AC++ ++EG S I+ H+
Sbjct: 356 VKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEG-----SQFHGKAITSGLIHYVTVSN 410
Query: 247 -MVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQN 305
+V L + G + D+ L M+ A +W A++ A G + + QLF+ Q+
Sbjct: 411 SLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRA----VETIQLFDKMVQH 466
Query: 306 A--ANYILLSNIYAAAER 321
+ + L+ + +A R
Sbjct: 467 GLKPDGVTLTGVISACSR 484
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 142/313 (45%), Gaps = 39/313 (12%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLF 60
+P +N ++ + + AR VFD +P+ N+ S+ ++ Y+KAG ++ F
Sbjct: 36 LPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKAGLISEMESTF 95
Query: 61 EQATEKDVVAWSALISGYVQNGQPNQALKVF-LEMESKNVKPDEFILVSLMSATSQLGHL 119
E+ ++D V W+ LI GY +G A+K + M + L++++ +S GH+
Sbjct: 96 EKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGHV 155
Query: 120 ELAQWVDSYVSK-----------------SSIDLQQD--HVIAALLDMNA---------- 150
L + + V K +++ D V L D N
Sbjct: 156 SLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGL 215
Query: 151 -KCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFT 209
CG ++ AL+LF+ M K D VS+ +MI+GL+ +G ++A+ F M ++GL D+ F
Sbjct: 216 LACGMIEDALQLFRGMEK-DSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFG 274
Query: 210 IILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHF---ACMVDLLSRSGHLGDAYELMKS 266
+L AC G ++EG + + + DH + ++D+ + L A +
Sbjct: 275 SVLPACGGLGAINEGKQIHACIIR----TNFQDHIYVGSALIDMYCKCKCLHYAKTVFDR 330
Query: 267 MHEPHAGAWGALL 279
M + + +W A++
Sbjct: 331 MKQKNVVSWTAMV 343
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/312 (21%), Positives = 120/312 (38%), Gaps = 83/312 (26%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEK-----------------NVVSF--- 40
M Q+NV SW AM+ G+ + G A +F M NV S
Sbjct: 331 MKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEG 390
Query: 41 -------------------TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQN 81
+++ Y K GD+ + LF + +D V+W+A++S Y Q
Sbjct: 391 SQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQF 450
Query: 82 GQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQ-WVDSYVSKSSIDLQQDH 140
G+ + +++F +M +KPD L ++SA S+ G +E Q + S+ I H
Sbjct: 451 GRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGH 510
Query: 141 VIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEG 200
+ ++D+ ++ G ++ A++ MP
Sbjct: 511 Y-SCMIDLFSRSGRLEEAMRFINGMP---------------------------------- 535
Query: 201 LVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDH---FACMVDLLSRSGHL 257
PD + +T +L+AC + G ++ G +S+ I P H + + + + G
Sbjct: 536 FPPDAIGWTTLLSACRNKGNLEIGKWAAESL-----IELDPHHPAGYTLLSSIYASKGKW 590
Query: 258 GDAYELMKSMHE 269
+L + M E
Sbjct: 591 DSVAQLRRGMRE 602
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 225 bits (573), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 118/313 (37%), Positives = 188/313 (60%), Gaps = 5/313 (1%)
Query: 36 NVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEME 95
NVV T+++D YAK G + A +F + K V+W +LISG+ QNG N+A + +EM+
Sbjct: 251 NVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQ 310
Query: 96 SKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIA-ALLDMNAKCGN 154
S +PD LV ++ A SQ+G L+ + V Y+ K + D V A AL+DM +KCG
Sbjct: 311 SLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRHV---LDRVTATALMDMYSKCGA 367
Query: 155 MDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTA 214
+ + ++F+ + ++DLV + +MI IHG G++ V LF M + PD F +L+A
Sbjct: 368 LSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTESNIEPDHATFASLLSA 427
Query: 215 CSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHA-G 273
SHSGLV++G ++F M KY I PS H+ C++DLL+R+G + +A +++ S +A
Sbjct: 428 LSHSGLVEQGQHWFSVMINKYKIQPSEKHYVCLIDLLARAGRVEEALDMINSEKLDNALP 487
Query: 274 AWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWIDVSLVRSRMR 333
W ALL C H + +G+I AN++ +L P + L+SN +A A +W +V+ VR MR
Sbjct: 488 IWVALLSGCINHRNLSVGDIAANKILQLNPDSIGIQTLVSNFFATANKWKEVAKVRKLMR 547
Query: 334 ERSVQKIPGCSKL 346
+++K+PG S +
Sbjct: 548 NGAMEKVPGYSAI 560
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 150/311 (48%), Gaps = 18/311 (5%)
Query: 34 EKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLE 93
+ +V +++++ Y K G M A LF + ++DV+ W+ +++G+ Q G+ +A++ + E
Sbjct: 148 KNDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYRE 207
Query: 94 MESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCG 153
M+++ D +++ L+ A+ LG ++ + V Y+ ++ + + V +L+DM AK G
Sbjct: 208 MQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVV-VETSLVDMYAKVG 266
Query: 154 NMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILT 213
++ A ++F M + VS+ S+I G + +G A M G PD V +L
Sbjct: 267 FIEVASRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLV 326
Query: 214 ACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAG 273
ACS G + G + +++ + ++D+ S+ G L + E+ + +
Sbjct: 327 ACSQVGSLKTGRLVHCYILKRHVLDRVTA--TALMDMYSKCGALSSSREIFEHVGRKDLV 384
Query: 274 AWGALLGACKLHGDSDLGEIVANQLF------ELEPQNAANYILL-----SNIYAAAERW 322
W ++ +HG+ E+V+ LF +EP +A LL S + + W
Sbjct: 385 CWNTMISCYGIHGNGQ--EVVS--LFLKMTESNIEPDHATFASLLSALSHSGLVEQGQHW 440
Query: 323 IDVSLVRSRMR 333
V + + +++
Sbjct: 441 FSVMINKYKIQ 451
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 67/147 (45%), Gaps = 8/147 (5%)
Query: 147 DMNAKCGNMDR---ALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVP 203
D+ A CG + A K+F E+P+R + Y SMI S ++ +RL++ M+ E + P
Sbjct: 55 DLIASCGRIGEISYARKVFDELPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQP 114
Query: 204 DEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFAC--MVDLLSRSGHLGDAY 261
D FT+ + AC SGLV E +G D F C +++L + G + +A
Sbjct: 115 DSSTFTMTIKACL-SGLVLEKGEAVWCKAVDFGY--KNDVFVCSSVLNLYMKCGKMDEAE 171
Query: 262 ELMKSMHEPHAGAWGALLGACKLHGDS 288
L M + W ++ G S
Sbjct: 172 VLFGKMAKRDVICWTTMVTGFAQAGKS 198
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 225 bits (573), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 118/313 (37%), Positives = 190/313 (60%), Gaps = 12/313 (3%)
Query: 41 TTMIDGYAKAGDMAAARFLFEQATEK-DVVAWSALISGYVQNGQPNQALKVFLEMESKNV 99
T+++ Y+ GD+ AR +F++ EK ++V W+A+IS Y +N +A+++F ME++ +
Sbjct: 104 TSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKI 163
Query: 100 KPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIA-ALLDMNAKCGNMDRA 158
+ D I+ +SA + LG +++ + + S K L D + +LL+M K G ++A
Sbjct: 164 ELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKA 223
Query: 159 LKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLM------EGLVPDEVAFTIIL 212
KLF E ++D+ +Y SMI G +++G ++++ LF M + P++V F +L
Sbjct: 224 RKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVL 283
Query: 213 TACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMH-EPH 271
ACSHSGLV+EG +F+SM Y + P HF CMVDL RSGHL DA+E + M +P+
Sbjct: 284 MACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQMPIKPN 343
Query: 272 AGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWIDVSLVRSR 331
W LLGAC LHG+ +LGE V ++FEL+ + +Y+ LSNIYA+ W + S +R R
Sbjct: 344 TVIWRTLLGACSLHGNVELGEEVQRRIFELDRDHVGDYVALSNIYASKGMWDEKSKMRDR 403
Query: 332 MRERSVQKIPGCS 344
+R+R ++PG S
Sbjct: 404 VRKR---RMPGKS 413
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 88/193 (45%), Gaps = 43/193 (22%)
Query: 10 NAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVV 69
N++L +VK G+ AR +FD K+V ++T+MI GYA
Sbjct: 208 NSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYA--------------------- 246
Query: 70 AWSALISGYVQNGQPNQALKVFLEMESKN------VKPDEFILVSLMSATSQLGHLELAQ 123
NGQ ++L++F +M++ + + P++ + ++ A S G +E +
Sbjct: 247 ----------LNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVLMACSHSGLVEEGK 296
Query: 124 -WVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMP-KRDLVSYCSMIQGLS 181
S + ++ ++ H ++D+ + G++ A + +MP K + V + +++ S
Sbjct: 297 RHFKSMIMDYNLKPREAH-FGCMVDLFCRSGHLKDAHEFINQMPIKPNTVIWRTLLGACS 355
Query: 182 IHG---CGEDAVR 191
+HG GE+ R
Sbjct: 356 LHGNVELGEEVQR 368
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 225 bits (573), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 129/339 (38%), Positives = 196/339 (57%), Gaps = 8/339 (2%)
Query: 12 MLCGFVKDGDLSSARGVF-DAMPEKNVVSFT---TMIDGYAKAGDMAAARFLFEQATEKD 67
+L G + GDLS R V A+ ++ T T+I YAK G + A F + KD
Sbjct: 314 ILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKD 373
Query: 68 VVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDS 127
V+++++LI+G V N +P ++ ++F EM + ++PD L+ +++A S L L
Sbjct: 374 VISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHG 433
Query: 128 YVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGE 187
Y + + AL+DM KCG +D A ++F M KRD+VS+ +M+ G IHG G+
Sbjct: 434 YCVVHGYAVNTS-ICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGK 492
Query: 188 DAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQ-KYGISPSPDHFAC 246
+A+ LFNSM G+ PDEV IL+ACSHSGLVDEG F SM + + + P DH+ C
Sbjct: 493 EALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPRIDHYNC 552
Query: 247 MVDLLSRSGHLGDAYELMKSM-HEPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQN 305
M DLL+R+G+L +AY+ + M EP G LL AC + +++LG V+ ++ L +
Sbjct: 553 MTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLSACWTYKNAELGNEVSKKMQSL-GET 611
Query: 306 AANYILLSNIYAAAERWIDVSLVRSRMRERSVQKIPGCS 344
+ +LLSN Y+AAERW D + +R ++R + K PG S
Sbjct: 612 TESLVLLSNTYSAAERWEDAARIRMIQKKRGLLKTPGYS 650
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/329 (26%), Positives = 155/329 (47%), Gaps = 46/329 (13%)
Query: 1 MPQRNVASWNAMLCGFV-----------------KDG---DLSSARGVFDAMPE------ 34
MP+R++ +WNAM+ GF DG +LS+ G+F A+
Sbjct: 164 MPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALRE 223
Query: 35 --------------KNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQ 80
++V T ++D YAK+ + AR +F+ +K+ V WSA+I GYV+
Sbjct: 224 GKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVE 283
Query: 81 NGQPNQALKVFLEM-ESKNVKPDEFILVSL-MSATSQLGHLELAQWVDSYVSKSSIDLQQ 138
N +A +VF +M + NV + + L + ++ G L + V Y K+ L
Sbjct: 284 NEMIKEAGEVFFQMLVNDNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDL 343
Query: 139 DHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLM 198
V ++ AK G++ A + F E+ +D++SY S+I G ++ E++ RLF+ M
Sbjct: 344 T-VQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRT 402
Query: 199 EGLVPDEVAFTIILTACSHSGLVDEGWN-YFQSMKQKYGISPSPDHFACMVDLLSRSGHL 257
G+ PD +LTACSH + G + + + Y ++ S + ++D+ ++ G L
Sbjct: 403 SGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICN--ALMDMYTKCGKL 460
Query: 258 GDAYELMKSMHEPHAGAWGALLGACKLHG 286
A + +MH+ +W +L +HG
Sbjct: 461 DVAKRVFDTMHKRDIVSWNTMLFGFGIHG 489
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 100/182 (54%), Gaps = 6/182 (3%)
Query: 47 YAKAGDMAAARFLFEQATEKDV--VAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEF 104
YA ++ AR +F++ + +AW +I Y N +AL ++ +M + V+P ++
Sbjct: 45 YASCNEVELARHVFDEIPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKY 104
Query: 105 ILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQD-HVIAALLDMNAKCGNMDRALKLFK 163
++ A + L ++ + + S+V+ S D D +V AL+D AKCG ++ A+K+F
Sbjct: 105 TYPFVLKACAGLRAIDDGKLIHSHVNCS--DFATDMYVCTALVDFYAKCGELEMAIKVFD 162
Query: 164 EMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSM-LMEGLVPDEVAFTIILTACSHSGLVD 222
EMPKRD+V++ +MI G S+H C D + LF M ++GL P+ + A +G +
Sbjct: 163 EMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALR 222
Query: 223 EG 224
EG
Sbjct: 223 EG 224
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 115/246 (46%), Gaps = 7/246 (2%)
Query: 41 TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKN-V 99
T ++D YAK G++ A +F++ ++D+VAW+A+ISG+ + + +FL+M + +
Sbjct: 142 TALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGL 201
Query: 100 KPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVI-AALLDMNAKCGNMDRA 158
P+ +V + A + G L + V Y ++ + D V+ +LD+ AK + A
Sbjct: 202 SPNLSTIVGMFPALGRAGALREGKAVHGYCTR--MGFSNDLVVKTGILDVYAKSKCIIYA 259
Query: 159 LKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVP--DEVAFTIILTACS 216
++F K++ V++ +MI G + ++A +F ML+ V VA +IL C+
Sbjct: 260 RRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTPVAIGLILMGCA 319
Query: 217 HSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWG 276
G + G K G ++ ++ G L DA+ + ++
Sbjct: 320 RFGDL-SGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYN 378
Query: 277 ALLGAC 282
+L+ C
Sbjct: 379 SLITGC 384
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 88/186 (47%), Gaps = 9/186 (4%)
Query: 105 ILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKE 164
+ +SL+ + +L L Q + ++ K S+ L V+ L + A C ++ A +F E
Sbjct: 1 MFLSLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDE 60
Query: 165 M--PKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVD 222
+ P+ + +++ MI+ + + E A+ L+ ML G+ P + + +L AC+ +D
Sbjct: 61 IPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAID 120
Query: 223 EGWNYFQSMKQKYGISP-SPDHFAC--MVDLLSRSGHLGDAYELMKSMHEPHAGAWGALL 279
+G + + S + D + C +VD ++ G L A ++ M + AW A++
Sbjct: 121 DG----KLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMI 176
Query: 280 GACKLH 285
LH
Sbjct: 177 SGFSLH 182
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 225 bits (573), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 127/348 (36%), Positives = 204/348 (58%), Gaps = 9/348 (2%)
Query: 5 NVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQAT 64
NV +A+L +VK L+ AR FD + NVVS T +I GY K + A LF
Sbjct: 127 NVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSITNLISGYLKKHEFEEALSLFRAMP 186
Query: 65 EKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVK-PDEFILVSLMSATSQLGHLELAQ 123
E+ VV W+A+I G+ Q G+ +A+ F++M + V P+E ++A S + +
Sbjct: 187 ERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIPNESTFPCAITAISNIASHGAGK 246
Query: 124 WVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMP--KRDLVSYCSMIQGLS 181
+ + K V +L+ +KCGNM+ +L F ++ +R++VS+ SMI G +
Sbjct: 247 SIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYA 306
Query: 182 IHGCGEDAVRLFNSMLME-GLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPS 240
+G GE+AV +F M+ + L P+ V +L AC+H+GL+ EG+ YF Y P+
Sbjct: 307 HNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFACNHAGLIQEGYMYFNKAVNDYD-DPN 365
Query: 241 P---DHFACMVDLLSRSGHLGDAYELMKSMH-EPHAGAWGALLGACKLHGDSDLGEIVAN 296
+H+ACMVD+LSRSG +A EL+KSM +P G W ALLG C++H + L ++ A+
Sbjct: 366 LLELEHYACMVDMLSRSGRFKEAEELIKSMPLDPGIGFWKALLGGCQIHSNKRLAKLAAS 425
Query: 297 QLFELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQKIPGCS 344
++ EL+P++ ++Y++LSN Y+A E W +VSL+R +M+E +++ GCS
Sbjct: 426 KILELDPRDVSSYVMLSNAYSAMENWQNVSLIRRKMKETGLKRFTGCS 473
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 91/193 (47%), Gaps = 31/193 (16%)
Query: 56 ARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQ 115
A +F++ E DV++ +A+I +V+ + +A + F + ++P+EF +++ +++
Sbjct: 46 AHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTFGTVIGSSTT 105
Query: 116 LGHLELAQWVDSYVSKSSI----------------------------DLQQDHV--IAAL 145
++L + + Y K + D + +V I L
Sbjct: 106 SRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSITNL 165
Query: 146 LDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLV-PD 204
+ K + AL LF+ MP+R +V++ ++I G S G E+AV F ML EG+V P+
Sbjct: 166 ISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIPN 225
Query: 205 EVAFTIILTACSH 217
E F +TA S+
Sbjct: 226 ESTFPCAITAISN 238
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 224 bits (570), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 122/355 (34%), Positives = 210/355 (59%), Gaps = 11/355 (3%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVS----FTTMIDGYAKAGDMAAA 56
+P ++S A+ C +K GDL + + +S TT++D Y+ + A
Sbjct: 109 LPANPLSSSFALKCC-IKSGDLLGGLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDA 167
Query: 57 RFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESK---NVKPDEFILVSLMSAT 113
+F++ ++D V+W+ L S Y++N + L +F +M++ VKPD + + A
Sbjct: 168 CKVFDEIPKRDTVSWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQAC 227
Query: 114 SQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSY 173
+ LG L+ + V ++ ++ + + + L+ M ++CG+MD+A ++F M +R++VS+
Sbjct: 228 ANLGALDFGKQVHDFIDENGLSGALN-LSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSW 286
Query: 174 CSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQ 233
++I GL+++G G++A+ FN ML G+ P+E T +L+ACSHSGLV EG +F M+
Sbjct: 287 TALISGLAMNGFGKEAIEAFNEMLKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRS 346
Query: 234 -KYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMH-EPHAGAWGALLGACKLHGDSDLG 291
++ I P+ H+ C+VDLL R+ L AY L+KSM +P + W LLGAC++HGD +LG
Sbjct: 347 GEFKIKPNLHHYGCVVDLLGRARLLDKAYSLIKSMEMKPDSTIWRTLLGACRVHGDVELG 406
Query: 292 EIVANQLFELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQKIPGCSKL 346
E V + L EL+ + A +Y+LL N Y+ +W V+ +RS M+E+ + PGCS +
Sbjct: 407 ERVISHLIELKAEEAGDYVLLLNTYSTVGKWEKVTELRSLMKEKRIHTKPGCSAI 461
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 222 bits (565), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 108/308 (35%), Positives = 187/308 (60%), Gaps = 2/308 (0%)
Query: 38 VSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESK 97
V +++++D Y K G + AR +F++ EKDVV+W+++I Y ++ + + +F E+
Sbjct: 254 VLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGS 313
Query: 98 NVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDR 157
+P+E+ +++A + L EL + V Y+++ D ++L+DM KCGN++
Sbjct: 314 CERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFD-PYSFASSSLVDMYTKCGNIES 372
Query: 158 ALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSH 217
A + PK DLVS+ S+I G + +G ++A++ F+ +L G PD V F +L+AC+H
Sbjct: 373 AKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTH 432
Query: 218 SGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSM-HEPHAGAWG 276
+GLV++G +F S+ +K+ +S + DH+ C+VDLL+RSG ++ M +P W
Sbjct: 433 AGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWA 492
Query: 277 ALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERS 336
++LG C +G+ DL E A +LF++EP+N Y+ ++NIYAAA +W + +R RM+E
Sbjct: 493 SVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIG 552
Query: 337 VQKIPGCS 344
V K PG S
Sbjct: 553 VTKRPGSS 560
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 155/286 (54%), Gaps = 5/286 (1%)
Query: 6 VASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATE 65
+ WN +L + K G L AR VFD MP +++ S+ M++GYA+ G + AR LF++ TE
Sbjct: 120 IVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTE 179
Query: 66 KDVVAWSALISGYVQNGQPNQALKVFLEMES-KNVKPDEFILVSLMSATSQLGHLELAQW 124
KD +W+A+++GYV+ QP +AL ++ M+ N +P+ F + ++A + + + +
Sbjct: 180 KDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKE 239
Query: 125 VDSYVSKSSIDLQQDHVI-AALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIH 183
+ ++ ++ +D D V+ ++L+DM KCG +D A +F ++ ++D+VS+ SMI
Sbjct: 240 IHGHIVRAGLD--SDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKS 297
Query: 184 GCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDH 243
+ LF+ ++ P+E F +L AC+ + G M + G P
Sbjct: 298 SRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYM-TRVGFDPYSFA 356
Query: 244 FACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHGDSD 289
+ +VD+ ++ G++ A ++ +P +W +L+G C +G D
Sbjct: 357 SSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPD 402
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 222 bits (565), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 125/385 (32%), Positives = 207/385 (53%), Gaps = 45/385 (11%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPE-------KNVVSF------------- 40
+ +R+ SWN+M+ G+ + G A +F M E + +VS
Sbjct: 193 ITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTG 252
Query: 41 -------------------TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQN 81
+ +I Y K GD+ +AR +F Q +KD VAW+A+I+ Y QN
Sbjct: 253 RLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQN 312
Query: 82 GQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHV 141
G+ ++A K+F EME V PD L +++SA +G LEL + ++++ S+ S+ +V
Sbjct: 313 GKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQ-HNIYV 371
Query: 142 IAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGL 201
L+DM KCG ++ AL++F+ MP ++ ++ +MI + G ++A+ LF+ M +
Sbjct: 372 ATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRM---SV 428
Query: 202 VPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAY 261
P ++ F +L+AC H+GLV +G YF M +G+ P +H+ ++DLLSR+G L +A+
Sbjct: 429 PPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAW 488
Query: 262 ELMKSM-HEPHAGAWGALLGACKLHGDSDLGEIVANQLFEL-EPQNAANYILLSNIYAAA 319
E M+ +P A+LGAC D + E L E+ E +NA NY++ SN+ A
Sbjct: 489 EFMERFPGKPDEIMLAAILGACHKRKDVAIREKAMRMLMEMKEAKNAGNYVISSNVLADM 548
Query: 320 ERWIDVSLVRSRMRERSVQKIPGCS 344
+ W + + +R+ MR+R V K PGCS
Sbjct: 549 KMWDESAKMRALMRDRGVVKTPGCS 573
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 145/283 (51%), Gaps = 6/283 (2%)
Query: 8 SWNAMLCGFVKDGDLSSARGV----FDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQA 63
++N + K ++ R V F E++V ++I YAK G + AR LF++
Sbjct: 134 TYNFVFIACAKLEEIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEI 193
Query: 64 TEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQ 123
TE+D V+W+++ISGY + G A+ +F +ME + +PDE LVS++ A S LG L +
Sbjct: 194 TERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGR 253
Query: 124 WVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIH 183
++ I L + + L+ M KCG++D A ++F +M K+D V++ +MI S +
Sbjct: 254 LLEEMAITKKIGLST-FLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQN 312
Query: 184 GCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDH 243
G +A +LF M G+ PD + +L+AC G ++ G ++ + + +
Sbjct: 313 GKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELG-KQIETHASELSLQHNIYV 371
Query: 244 FACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHG 286
+VD+ + G + +A + ++M + W A++ A G
Sbjct: 372 ATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAYAHQG 414
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 92/313 (29%), Positives = 144/313 (46%), Gaps = 46/313 (14%)
Query: 43 MIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQA-LKVFLEMESKNVKP 101
+I + GD + FLF E + +++ +I G ++A L ++ M+ +KP
Sbjct: 71 LIPKAVELGDFNYSSFLFSVTEEPNHYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKP 130
Query: 102 DEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQD-HVIAALLDMNAKCGNMDRALK 160
D+F + A ++L + + + V S + K + L++D H+ +L+ M AKCG + A K
Sbjct: 131 DKFTYNFVFIACAKLEEIGVGRSVHSSLFK--VGLERDVHINHSLIMMYAKCGQVGYARK 188
Query: 161 LFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSG- 219
LF E+ +RD VS+ SMI G S G +DA+ LF M EG PDE +L ACSH G
Sbjct: 189 LFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGD 248
Query: 220 -----LVDE-------GWNYFQ-----SMKQKYG------------ISPSPDHFACMVDL 250
L++E G + F SM K G I + M+ +
Sbjct: 249 LRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITV 308
Query: 251 LSRSGHLGDAYELMKSMHE----PHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNA 306
S++G +A++L M + P AG +L AC G +LG+ + EL Q+
Sbjct: 309 YSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQH- 367
Query: 307 ANYILLSNIYAAA 319
NIY A
Sbjct: 368 -------NIYVAT 373
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 221 bits (564), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 113/314 (35%), Positives = 189/314 (60%), Gaps = 5/314 (1%)
Query: 34 EKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLE 93
+ N+ +++D Y + G ++ A+ F + +KD++ W+ LIS ++ ++AL +F
Sbjct: 245 QSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISE-LERSDSSEALLMFQR 303
Query: 94 MESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCG 153
ES+ P+ + SL++A + + L Q + + + + + + AL+DM AKCG
Sbjct: 304 FESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFN-KNVELANALIDMYAKCG 362
Query: 154 NMDRALKLFKEM-PKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIIL 212
N+ + ++F E+ +R+LVS+ SM+ G HG G +AV LF+ M+ G+ PD + F +L
Sbjct: 363 NIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVL 422
Query: 213 TACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSM-HEPH 271
+AC H+GLV++G YF M+ +YGI+P D + C+VDLL R+G +G+AYEL++ M +P
Sbjct: 423 SACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEAYELVERMPFKPD 482
Query: 272 AGAWGALLGACKLHGDSDL-GEIVANQLFELEPQNAANYILLSNIYAAAERWIDVSLVRS 330
WGA+LGACK H + L + A ++ EL+P+ Y++LS IYAA +W+D + VR
Sbjct: 483 ESTWGAILGACKAHKHNGLISRLAARKVMELKPKMVGTYVMLSYIYAAEGKWVDFARVRK 542
Query: 331 RMRERSVQKIPGCS 344
MR +K G S
Sbjct: 543 MMRMMGNKKEAGMS 556
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 121/248 (48%), Gaps = 3/248 (1%)
Query: 33 PEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFL 92
P+K+ + T +I Y + G + AR LF++ ++DVVAW+A+I+GY + +A + F
Sbjct: 41 PKKHHILATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFH 100
Query: 93 EMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKC 152
EM + P+EF L S++ + + L V V K ++ +V A+++M A C
Sbjct: 101 EMVKQGTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGME-GSLYVDNAMMNMYATC 159
Query: 153 G-NMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTII 211
M+ A +F+++ ++ V++ ++I G + G G ++++ ML+E TI
Sbjct: 160 SVTMEAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIA 219
Query: 212 LTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPH 271
+ A + V G S+ ++ G + ++DL R G+L +A M +
Sbjct: 220 VRASASIDSVTTGKQIHASVIKR-GFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKD 278
Query: 272 AGAWGALL 279
W L+
Sbjct: 279 LITWNTLI 286
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 221 bits (564), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 122/336 (36%), Positives = 194/336 (57%), Gaps = 14/336 (4%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMP----EKNVVSFTTMIDGYAKAGDMAAA 56
+ ++++ +NAM+ G+ + A + M + +V+++ +I G++ +
Sbjct: 178 LGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKV 237
Query: 57 RFLFE----QATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSA 112
+ E + DVV+W+++ISG V N Q +A F +M + + P+ +++L+ A
Sbjct: 238 SEILELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPA 297
Query: 113 TSQLGHLELAQWVDSYVSKSSIDLQQDH--VIAALLDMNAKCGNMDRALKLFKEMPKRDL 170
+ L +++ + + Y S + +DH V +ALLDM KCG + A+ LF++ PK+
Sbjct: 298 CTTLAYMKHGKEIHGY---SVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKKTT 354
Query: 171 VSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQS 230
V++ SMI + HG + AV LF+ M G D + FT ILTACSH+GL D G N F
Sbjct: 355 VTFNSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFLL 414
Query: 231 MKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMH-EPHAGAWGALLGACKLHGDSD 289
M+ KY I P +H+ACMVDLL R+G L +AYE++K+M EP WGALL AC+ HG+ +
Sbjct: 415 MQNKYRIVPRLEHYACMVDLLGRAGKLVEAYEMIKAMRMEPDLFVWGALLAACRNHGNME 474
Query: 290 LGEIVANQLFELEPQNAANYILLSNIYAAAERWIDV 325
L I A L ELEP+N+ N +LL+++YA A W V
Sbjct: 475 LARIAAKHLAELEPENSGNGLLLTSLYANAGSWESV 510
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 94/175 (53%), Gaps = 1/175 (0%)
Query: 43 MIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPD 102
++ Y + G + AR +F++ ++D+ +I +NG ++L F EM +K D
Sbjct: 57 LVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGACARNGYYQESLDFFREMYKDGLKLD 116
Query: 103 EFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLF 162
FI+ SL+ A+ L E + + V K S + ++++L+DM +K G + A K+F
Sbjct: 117 AFIVPSLLKASRNLLDREFGKMIHCLVLKFSYE-SDAFIVSSLIDMYSKFGEVGNARKVF 175
Query: 163 KEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSH 217
++ ++DLV + +MI G + + ++A+ L M + G+ PD + + +++ SH
Sbjct: 176 SDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSH 230
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 64/139 (46%), Gaps = 1/139 (0%)
Query: 141 VIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEG 200
+ A L+ +CG + A K+F EMPKRD+ MI + +G ++++ F M +G
Sbjct: 53 IAAKLVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGACARNGYYQESLDFFREMYKDG 112
Query: 201 LVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDA 260
L D +L A S + L E + K+ + ++D+ S+ G +G+A
Sbjct: 113 LKLDAFIVPSLLKA-SRNLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNA 171
Query: 261 YELMKSMHEPHAGAWGALL 279
++ + E + A++
Sbjct: 172 RKVFSDLGEQDLVVFNAMI 190
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 221 bits (562), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 126/385 (32%), Positives = 200/385 (51%), Gaps = 45/385 (11%)
Query: 4 RNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVS----FT------------------ 41
R++ SWNAM+ GFV G S A F M E N+ FT
Sbjct: 171 RSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGK 230
Query: 42 ---------------------TMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQ 80
+++D Y K G + +AR F+Q EK +++WS+LI GY Q
Sbjct: 231 QIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQ 290
Query: 81 NGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDH 140
G+ +A+ +F ++ N + D F L S++ + L + + + K L+
Sbjct: 291 EGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETS- 349
Query: 141 VIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEG 200
V+ +++DM KCG +D A K F EM +D++S+ +I G HG G+ +VR+F ML
Sbjct: 350 VLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHN 409
Query: 201 LVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDA 260
+ PDEV + +L+ACSHSG++ EG F + + +GI P +H+AC+VDLL R+G L +A
Sbjct: 410 IEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEA 469
Query: 261 YELMKSMH-EPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAA 319
L+ +M +P+ G W LL C++HGD +LG+ V L ++ +N ANY+++SN+Y A
Sbjct: 470 KHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQA 529
Query: 320 ERWIDVSLVRSRMRERSVQKIPGCS 344
W + R + ++K G S
Sbjct: 530 GYWNEQGNARELGNIKGLKKEAGMS 554
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 126/248 (50%), Gaps = 6/248 (2%)
Query: 36 NVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEME 95
N+++ +ID Y K + A +F+ E++VV+WSAL+SG+V NG +L +F EM
Sbjct: 40 NLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMG 99
Query: 96 SKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNM 155
+ + P+EF + + A L LE + + K ++ + V +L+DM +KCG +
Sbjct: 100 RQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVE-VGNSLVDMYSKCGRI 158
Query: 156 DRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLV---PDEVAFTIIL 212
+ A K+F+ + R L+S+ +MI G G G A+ F M+ E + PDE T +L
Sbjct: 159 NEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFG-MMQEANIKERPDEFTLTSLL 217
Query: 213 TACSHSGLVDEGWNYFQSM-KQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPH 271
ACS +G++ G + + + S +VDL + G+L A + + E
Sbjct: 218 KACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKT 277
Query: 272 AGAWGALL 279
+W +L+
Sbjct: 278 MISWSSLI 285
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/347 (23%), Positives = 154/347 (44%), Gaps = 46/347 (13%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEK----NVVSFTT-------------- 42
MP+RNV SW+A++ G V +GDL + +F M + N +F+T
Sbjct: 67 MPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKG 126
Query: 43 ---------------------MIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQN 81
++D Y+K G + A +F + ++ +++W+A+I+G+V
Sbjct: 127 LQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHA 186
Query: 82 GQPNQALKVFLEMESKNVK--PDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQD 139
G ++AL F M+ N+K PDEF L SL+ A S G + + + ++ +S
Sbjct: 187 GYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSS 246
Query: 140 HVI-AALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLM 198
I +L+D+ KCG + A K F ++ ++ ++S+ S+I G + G +A+ LF +
Sbjct: 247 ATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQE 306
Query: 199 EGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLG 258
D A + I+ + L+ +G Q++ K +VD+ + G +
Sbjct: 307 LNSQIDSFALSSIIGVFADFALLRQG-KQMQALAVKLPSGLETSVLNSVVDMYLKCGLVD 365
Query: 259 DAYELMKSMHEPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQN 305
+A + M +W ++ HG LG+ +E+ N
Sbjct: 366 EAEKCFAEMQLKDVISWTVVITGYGKHG---LGKKSVRIFYEMLRHN 409
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 220 bits (561), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 119/308 (38%), Positives = 190/308 (61%), Gaps = 8/308 (2%)
Query: 43 MIDGYAKAGDMAAARFLFEQATEK-DVVAWSALISGYVQNGQPNQALKVFLEMESKNVKP 101
+I Y K G+M +F + E+ D V W+++ISGY+ N +AL + M +
Sbjct: 558 LIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRL 617
Query: 102 DEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVI-AALLDMNAKCGNMDRALK 160
D F+ +++SA + + LE V + ++ L+ D V+ +AL+DM +KCG +D AL+
Sbjct: 618 DSFMYATVLSAFASVATLERGMEVHACSVRAC--LESDVVVGSALVDMYSKCGRLDYALR 675
Query: 161 LFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVP-DEVAFTIILTACSHSG 219
F MP R+ S+ SMI G + HG GE+A++LF +M ++G P D V F +L+ACSH+G
Sbjct: 676 FFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAG 735
Query: 220 LVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSM-HEPHAGAWGAL 278
L++EG+ +F+SM YG++P +HF+CM D+L R+G L + ++ M +P+ W +
Sbjct: 736 LLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTV 795
Query: 279 LGA-CKLHG-DSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERS 336
LGA C+ +G ++LG+ A LF+LEP+NA NY+LL N+YAA RW D+ R +M++
Sbjct: 796 LGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDAD 855
Query: 337 VQKIPGCS 344
V+K G S
Sbjct: 856 VKKEAGYS 863
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/324 (23%), Positives = 142/324 (43%), Gaps = 48/324 (14%)
Query: 4 RNVASWNAMLCGFVKDGDLSSARGVFDAM-------PEKNVVSFTT-------------- 42
+N SWN+++ + + GD SA +F +M E S T
Sbjct: 169 KNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLE 228
Query: 43 --------------------MIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNG 82
++ +AK+G ++ AR +F Q ++ V + L+ G V+
Sbjct: 229 QIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQK 288
Query: 83 QPNQALKVFLEMESK-NVKPDEFILV----SLMSATSQLGHLELAQWVDSYVSKSSIDLQ 137
+A K+F++M S +V P+ ++++ S ++G L+ + V +V + +
Sbjct: 289 WGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVG-LKKGREVHGHVITTGLVDF 347
Query: 138 QDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSML 197
+ L++M AKCG++ A ++F M +D VS+ SMI GL +GC +AV + SM
Sbjct: 348 MVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMR 407
Query: 198 MEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHL 257
++P L++C+ G K GI + ++ L + +G+L
Sbjct: 408 RHDILPGSFTLISSLSSCASLKWAKLG-QQIHGESLKLGIDLNVSVSNALMTLYAETGYL 466
Query: 258 GDAYELMKSMHEPHAGAWGALLGA 281
+ ++ SM E +W +++GA
Sbjct: 467 NECRKIFSSMPEHDQVSWNSIIGA 490
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 149/306 (48%), Gaps = 13/306 (4%)
Query: 34 EKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLE 93
+K+V +I+ Y + GD +AR +F++ ++ V+W+ ++SGY +NG+ +AL +
Sbjct: 33 DKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRD 92
Query: 94 MESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIA-ALLDMNAKC 152
M + + +++ VS++ A ++G + + + + D V++ L+ M KC
Sbjct: 93 MVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKC 152
Query: 153 -GNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAF-TI 210
G++ AL F ++ ++ VS+ S+I S G A R+F+SM +G P E F ++
Sbjct: 153 IGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSL 212
Query: 211 ILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEP 270
+ TACS + QK G+ + +V ++SG L A ++ M
Sbjct: 213 VTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETR 272
Query: 271 HAGAW-GALLGACKLHGDSDLGEIV--ANQLFELEPQNAANYILLSNI--YAAAERWIDV 325
+A G ++G + + ++ N + ++ P++ ILLS+ Y+ AE +V
Sbjct: 273 NAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYV--ILLSSFPEYSLAE---EV 327
Query: 326 SLVRSR 331
L + R
Sbjct: 328 GLKKGR 333
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 80/139 (57%), Gaps = 1/139 (0%)
Query: 43 MIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPD 102
+++ YAK G +A AR +F T+KD V+W+++I+G QNG +A++ + M ++ P
Sbjct: 355 LVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPG 414
Query: 103 EFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLF 162
F L+S +S+ + L +L Q + K IDL V AL+ + A+ G ++ K+F
Sbjct: 415 SFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVS-VSNALMTLYAETGYLNECRKIF 473
Query: 163 KEMPKRDLVSYCSMIQGLS 181
MP+ D VS+ S+I L+
Sbjct: 474 SSMPEHDQVSWNSIIGALA 492
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 80/362 (22%), Positives = 148/362 (40%), Gaps = 50/362 (13%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVV--SFTTM--------------- 43
M ++ SWN+M+ G ++G A + +M +++ SFT +
Sbjct: 375 MTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLG 434
Query: 44 --IDG--------------------YAKAGDMAAARFLFEQATEKDVVAWSALISGYVQN 81
I G YA+ G + R +F E D V+W+++I ++
Sbjct: 435 QQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARS 494
Query: 82 GQP-NQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDH 140
+ +A+ FL + K + S++SA S L EL + + K++I +
Sbjct: 495 ERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNI-ADEAT 553
Query: 141 VIAALLDMNAKCGNMDRALKLFKEMP-KRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLME 199
AL+ KCG MD K+F M +RD V++ SMI G + A+ L ML
Sbjct: 554 TENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQT 613
Query: 200 GLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGD 259
G D + +L+A + ++ G + + + + +VD+ S+ G L
Sbjct: 614 GQRLDSFMYATVLSAFASVATLERGME-VHACSVRACLESDVVVGSALVDMYSKCGRLDY 672
Query: 260 AYELMKSMHEPHAGAWGALLGACKLHGDSDLGEIVANQLFE---LEPQNAANYILLSNIY 316
A +M ++ +W +++ HG + A +LFE L+ Q +++ +
Sbjct: 673 ALRFFNTMPVRNSYSWNSMISGYARHGQGE----EALKLFETMKLDGQTPPDHVTFVGVL 728
Query: 317 AA 318
+A
Sbjct: 729 SA 730
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 76/161 (47%), Gaps = 3/161 (1%)
Query: 31 AMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKV 90
A E +VV + ++D Y+K G + A F ++ +W+++ISGY ++GQ +ALK+
Sbjct: 648 ACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKL 707
Query: 91 FLEME-SKNVKPDEFILVSLMSATSQLGHLELA-QWVDSYVSKSSIDLQQDHVIAALLDM 148
F M+ PD V ++SA S G LE + +S + + +H + + D+
Sbjct: 708 FETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEH-FSCMADV 766
Query: 149 NAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDA 189
+ G +D+ ++MP + V + G G A
Sbjct: 767 LGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKA 807
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 220 bits (560), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 123/328 (37%), Positives = 196/328 (59%), Gaps = 6/328 (1%)
Query: 16 FVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALI 75
+ D+ A F+A + ++ S +I G+ K G + AR +F+Q +KD+ +W+A+I
Sbjct: 350 YAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMI 409
Query: 76 SGYVQNGQPNQALKVFLEM-ESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSI 134
SGY Q+ P AL +F EM S VKPD +VS+ SA S LG LE + Y++ S+I
Sbjct: 410 SGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTI 469
Query: 135 DLQQDHVIAALLDMNAKCGNMDRALKLF---KEMPKRDLVSYCSMIQGLSIHGCGEDAVR 191
D++ AA++DM AKCG+++ AL +F K + + + ++I G + HG + A+
Sbjct: 470 P-PNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALD 528
Query: 192 LFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLL 251
L++ + + P+ + F +L+AC H+GLV+ G YF+SMK +GI P H+ CMVDLL
Sbjct: 529 LYSDLQSLPIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLL 588
Query: 252 SRSGHLGDAYELMKSMH-EPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYI 310
++G L +A E++K M + WG LL A + HG+ ++ E+ A +L ++P + +
Sbjct: 589 GKAGRLEEAKEMIKKMPVKADVMIWGMLLSASRTHGNVEIAELAATELAAIDPSHGGCKV 648
Query: 311 LLSNIYAAAERWIDVSLVRSRMRERSVQ 338
+LSN+YA A RW DV+LVR MR R V+
Sbjct: 649 MLSNVYADAGRWEDVALVREEMRTRDVE 676
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 89/313 (28%), Positives = 154/313 (49%), Gaps = 40/313 (12%)
Query: 13 LCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWS 72
LC +KD AR +FD MPE+N+V++ M++GY+KAG + A LF+Q TEKD+V+W
Sbjct: 220 LCLCLKD-----ARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWG 274
Query: 73 ALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATS---------QLGHLELAQ 123
+I G ++ Q ++AL + EM +KP E ++V L+SA++ QL + +
Sbjct: 275 TMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKR 334
Query: 124 WVDSY------------VSKS-SIDLQQ------DHVIA--ALLDMNAKCGNMDRALKLF 162
D Y VS + LQQ DH+ + AL+ K G +++A ++F
Sbjct: 335 GFDCYDFLQATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVF 394
Query: 163 KEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLV-PDEVAFTIILTACSHSGLV 221
+ +D+ S+ +MI G + + A+ LF M+ V PD + + +A S G +
Sbjct: 395 DQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSL 454
Query: 222 DEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELM---KSMHEPHAGAWGAL 278
+EG + I P+ + A ++D+ ++ G + A + K++ W A+
Sbjct: 455 EEGKRAHDYLNFS-TIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAI 513
Query: 279 LGACKLHGDSDLG 291
+ HG + L
Sbjct: 514 ICGSATHGHAKLA 526
Score = 107 bits (268), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 78/246 (31%), Positives = 127/246 (51%), Gaps = 9/246 (3%)
Query: 10 NAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVV 69
N++L + K L+ A VF + + SF M+DGY ++ + A LF+ E+ V
Sbjct: 80 NSVLNMYAKCRLLADAESVFRDHAKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCV 139
Query: 70 AWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYV 129
+++ LI GY QN Q ++A+++F EM + + +E L +++SA S LG + + + S
Sbjct: 140 SYTTLIKGYAQNNQWSEAMELFREMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLA 199
Query: 130 SKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDA 189
K ++ + V LL M C + A KLF EMP+R+LV++ M+ G S G E A
Sbjct: 200 IKLKLE-GRVFVSTNLLHMYCLCLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQA 258
Query: 190 VRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVD 249
LF+ + + D V++ ++ C +DE Y+ M + G+ PS MVD
Sbjct: 259 EELFDQITEK----DIVSWGTMIDGCLRKNQLDEALVYYTEM-LRCGMKPSE---VMMVD 310
Query: 250 LLSRSG 255
LLS S
Sbjct: 311 LLSASA 316
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 220 bits (560), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 125/377 (33%), Positives = 200/377 (53%), Gaps = 38/377 (10%)
Query: 5 NVASWNAMLCGFVKDGDLSSARGVFDAMPEKNV--------------------------- 37
NV SW AM+ GF+++ A +F M K V
Sbjct: 361 NVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSEVHAQVV 420
Query: 38 --------VSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALK 89
T ++D Y K G + A +F +KD+VAWSA+++GY Q G+ A+K
Sbjct: 421 KTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIK 480
Query: 90 VFLEMESKNVKPDEFILVSLMSATSQL-GHLELAQWVDSYVSKSSIDLQQDHVIAALLDM 148
+F E+ +KP+EF S+++ + + + + KS +D V +ALL M
Sbjct: 481 MFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLD-SSLCVSSALLTM 539
Query: 149 NAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAF 208
AK GN++ A ++FK ++DLVS+ SMI G + HG A+ +F M + D V F
Sbjct: 540 YAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTF 599
Query: 209 TIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMH 268
+ AC+H+GLV+EG YF M + I+P+ +H +CMVDL SR+G L A +++++M
Sbjct: 600 IGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMP 659
Query: 269 EPHAGA-WGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWIDVSL 327
P W +L AC++H ++LG + A ++ ++P+++A Y+LLSN+YA + W + +
Sbjct: 660 NPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAK 719
Query: 328 VRSRMRERSVQKIPGCS 344
VR M ER+V+K PG S
Sbjct: 720 VRKLMNERNVKKEPGYS 736
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 129/257 (50%), Gaps = 7/257 (2%)
Query: 34 EKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLE 93
+K + ++I+ Y K G++ AR LF++ K VV W+++ISGY NG +AL +F
Sbjct: 226 DKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYS 285
Query: 94 MESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCG 153
M V+ E S++ + L L + + V K Q+ + AL+ +KC
Sbjct: 286 MRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQN-IRTALMVAYSKCT 344
Query: 154 NMDRALKLFKEMP-KRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIIL 212
M AL+LFKE+ ++VS+ +MI G + E+AV LF+ M +G+ P+E +++IL
Sbjct: 345 AMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVIL 404
Query: 213 TACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHA 272
TA ++ + Q +K Y S + ++D + G + +A ++ + +
Sbjct: 405 TALP---VISPSEVHAQVVKTNYERSSTVG--TALLDAYVKLGKVEEAAKVFSGIDDKDI 459
Query: 273 GAWGALLGACKLHGDSD 289
AW A+L G+++
Sbjct: 460 VAWSAMLAGYAQTGETE 476
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 99/177 (55%), Gaps = 1/177 (0%)
Query: 41 TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVK 100
T+++D Y K + R +F++ E++VV W+ LISGY +N ++ L +F+ M+++ +
Sbjct: 132 TSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQ 191
Query: 101 PDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALK 160
P+ F + + ++ G V + V K+ +D + V +L+++ KCGN+ +A
Sbjct: 192 PNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLD-KTIPVSNSLINLYLKCGNVRKARI 250
Query: 161 LFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSH 217
LF + + +V++ SMI G + +G +A+ +F SM + + E +F ++ C++
Sbjct: 251 LFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCAN 307
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/241 (19%), Positives = 106/241 (43%), Gaps = 2/241 (0%)
Query: 46 GYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFI 105
G + + A LF+++ +D ++ +L+ G+ ++G+ +A ++FL + ++ D I
Sbjct: 36 GTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSI 95
Query: 106 LVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEM 165
S++ ++ L + + K L V +L+D K N K+F EM
Sbjct: 96 FSSVLKVSATLCDELFGRQLHCQCIKFGF-LDDVSVGTSLVDTYMKGSNFKDGRKVFDEM 154
Query: 166 PKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGW 225
+R++V++ ++I G + + ++ + LF M EG P+ F L + G+ G
Sbjct: 155 KERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGL 214
Query: 226 NYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLH 285
++ K G+ + +++L + G++ A L W +++ +
Sbjct: 215 Q-VHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAAN 273
Query: 286 G 286
G
Sbjct: 274 G 274
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 219 bits (558), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 113/307 (36%), Positives = 182/307 (59%), Gaps = 5/307 (1%)
Query: 43 MIDGYAKAGD---MAAARFLFEQATEKDVVAWSALISGYVQNGQ-PNQALKVFLEMESKN 98
+ID Y+K G M + +F++ D+V W+ +ISGY N + +A+K F +M+
Sbjct: 281 LIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIG 340
Query: 99 VKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRA 158
+PD+ V + SA S L + + KS I + V AL+ + K GN+ A
Sbjct: 341 HRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDA 400
Query: 159 LKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHS 218
+F MP+ + VS+ MI+G + HG G +A+ L+ ML G+ P+++ F +L+AC+H
Sbjct: 401 RWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHC 460
Query: 219 GLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSM-HEPHAGAWGA 277
G VDEG YF +MK+ + I P +H++CM+DLL R+G L +A + +M ++P + AW A
Sbjct: 461 GKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAA 520
Query: 278 LLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSV 337
LLGAC+ H + L E AN+L ++P A Y++L+N+YA A +W +++ VR MR + +
Sbjct: 521 LLGACRKHKNMALAERAANELMVMQPLAATPYVMLANMYADARKWEEMASVRKSMRGKRI 580
Query: 338 QKIPGCS 344
+K PGCS
Sbjct: 581 RKKPGCS 587
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 110/443 (24%), Positives = 174/443 (39%), Gaps = 131/443 (29%)
Query: 5 NVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQ-- 62
NV S+N ++ + KD + AR +FD +P+ + VS+ T+I GYA A + AA LF++
Sbjct: 73 NVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMR 132
Query: 63 --ATEKDVVAWSALISG---------------------------------YVQNGQPNQA 87
E D S LI+ Y + G +A
Sbjct: 133 KLGFEVDGFTLSGLIAACCDRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREA 192
Query: 88 LKVFL--------------------------------EMESKNVKPDEFILVSLMSATSQ 115
+ VF EM K K D F L S+++A +
Sbjct: 193 VSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTS 252
Query: 116 LGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMD---RALKLFKEMPKRDLVS 172
L HL + + K+ Q HV + L+D +KCG D + K+F+E+ DLV
Sbjct: 253 LDHLIGGRQFHGKLIKAGFH-QNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVV 311
Query: 173 YCSMIQGLSIH-GCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSH-------------- 217
+ +MI G S++ E+AV+ F M G PD+ +F + +ACS+
Sbjct: 312 WNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLA 371
Query: 218 -----------------------SGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRS 254
L D W F M + +S F CM+ ++
Sbjct: 372 IKSHIPSNRISVNNALISLYYKSGNLQDARW-VFDRMPELNAVS-----FNCMIKGYAQH 425
Query: 255 GHLGDAYELMKSMHE----PHAGAWGALLGACKLHGDSDLGEIVANQL---FELEPQNAA 307
GH +A L + M + P+ + A+L AC G D G+ N + F++EP+ A
Sbjct: 426 GHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPE-AE 484
Query: 308 NYILLSNIYA------AAERWID 324
+Y + ++ AER+ID
Sbjct: 485 HYSCMIDLLGRAGKLEEAERFID 507
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 117/276 (42%), Gaps = 24/276 (8%)
Query: 16 FVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALI 75
+ K G LS AR F + E NV S+ ++ YAK + AR LF++ + D V+++ LI
Sbjct: 53 YSKCGRLSYARAAFYSTEEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLI 112
Query: 76 SGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSA-------TSQLGHLELAQWVDSY 128
SGY + A+ +F M + D F L L++A QL ++ DSY
Sbjct: 113 SGYADARETFAAMVLFKRMRKLGFEVDGFTLSGLIAACCDRVDLIKQLHCFSVSGGFDSY 172
Query: 129 VSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPK-RDLVSYCSMIQGLSIHGCGE 187
S V A + +K G + A+ +F M + RD VS+ SMI H G
Sbjct: 173 SS----------VNNAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGA 222
Query: 188 DAVRLFNSMLMEGLVPDEVAFTIILTA-CSHSGLVDEGWNYFQSMKQKYGISPSPDHFAC 246
A+ L+ M+ +G D +L A S L+ G F K G + +
Sbjct: 223 KALALYKEMIFKGFKIDMFTLASVLNALTSLDHLI--GGRQFHGKLIKAGFHQNSHVGSG 280
Query: 247 MVDLLSRSGHLGDAYELMKSMHE---PHAGAWGALL 279
++D S+ G Y+ K E P W ++
Sbjct: 281 LIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMI 316
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 76/169 (44%), Gaps = 33/169 (19%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLF 60
+P ++ NA++ + K G+L AR VFD MPE N VSF MI GYA
Sbjct: 376 IPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYA------------ 423
Query: 61 EQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLE 120
Q+G +AL ++ M + P++ V+++SA + G ++
Sbjct: 424 -------------------QHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVD 464
Query: 121 LAQ-WVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKR 168
Q + ++ I+ + +H + ++D+ + G ++ A + MP +
Sbjct: 465 EGQEYFNTMKETFKIEPEAEHY-SCMIDLLGRAGKLEEAERFIDAMPYK 512
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 219 bits (557), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 131/387 (33%), Positives = 206/387 (53%), Gaps = 49/387 (12%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAM-------PE------------------- 34
MP+ +V W A+L F K+ A G+F AM P+
Sbjct: 224 MPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQ 283
Query: 35 --------------KNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQ 80
NVV ++++D Y K G + AR +F ++K+ V+WSAL+ GY Q
Sbjct: 284 GKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQ 343
Query: 81 NGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDS-YVSKSSIDLQQD 139
NG+ +A+++F EME K D + +++ A + L + L + + YV +
Sbjct: 344 NGEHEKAIEIFREMEEK----DLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFG--NV 397
Query: 140 HVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLME 199
V +AL+D+ K G +D A +++ +M R+++++ +M+ L+ +G GE+AV FN M+ +
Sbjct: 398 IVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKK 457
Query: 200 GLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGD 259
G+ PD ++F ILTAC H+G+VDEG NYF M + YGI P +H++CM+DLL R+G +
Sbjct: 458 GIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEE 517
Query: 260 AYELMKSMH-EPHAGAWGALLGACKLHGD-SDLGEIVANQLFELEPQNAANYILLSNIYA 317
A L++ A WG LLG C + D S + E +A ++ ELEP+ +Y+LLSN+Y
Sbjct: 518 AENLLERAECRNDASLWGVLLGPCAANADASRVAERIAKRMMELEPKYHMSYVLLSNMYK 577
Query: 318 AAERWIDVSLVRSRMRERSVQKIPGCS 344
A R D +R M R V K G S
Sbjct: 578 AIGRHGDALNIRKLMVRRGVAKTVGQS 604
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 133/254 (52%), Gaps = 12/254 (4%)
Query: 42 TMIDGYAKAG-DMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVK 100
+++ Y K G M R +F+ KD ++W++++SGYV + +AL+VF+EM S +
Sbjct: 101 SLLSLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLD 160
Query: 101 PDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDR--- 157
+EF L S + A S+LG + L + V + +H I++ L A ++R
Sbjct: 161 ANEFTLSSAVKACSELGEVRLGRCFHGVVITHG--FEWNHFISSTL---AYLYGVNREPV 215
Query: 158 -ALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLM-EGLVPDEVAFTIILTAC 215
A ++F EMP+ D++ + +++ S + E+A+ LF +M +GLVPD F +LTAC
Sbjct: 216 DARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTAC 275
Query: 216 SHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAW 275
+ + +G + GI + + ++D+ + G + +A ++ M + ++ +W
Sbjct: 276 GNLRRLKQGKEIHGKLITN-GIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSW 334
Query: 276 GALLGACKLHGDSD 289
ALLG +G+ +
Sbjct: 335 SALLGGYCQNGEHE 348
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 218 bits (556), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 121/341 (35%), Positives = 202/341 (59%), Gaps = 12/341 (3%)
Query: 11 AMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVV- 69
A+L + K +S AR +FD +P++N V + MI Y G + A L+E DV+
Sbjct: 88 ALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKEAVELYEAM---DVMP 144
Query: 70 ---AWSALISGYV--QNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQW 124
+++A+I G V ++G +A++ + +M KP+ L++L+SA S +G L +
Sbjct: 145 NESSFNAIIKGLVGTEDGS-YRAIEFYRKMIEFRFKPNLITLLALVSACSAIGAFRLIKE 203
Query: 125 VDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHG 184
+ SY ++ I+ + + L++ +CG++ +F M RD+V++ S+I ++HG
Sbjct: 204 IHSYAFRNLIE-PHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWSSLISAYALHG 262
Query: 185 CGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHF 244
E A++ F M + + PD++AF +L ACSH+GL DE YF+ M+ YG+ S DH+
Sbjct: 263 DAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYFKRMQGDYGLRASKDHY 322
Query: 245 ACMVDLLSRSGHLGDAYELMKSMHE-PHAGAWGALLGACKLHGDSDLGEIVANQLFELEP 303
+C+VD+LSR G +AY+++++M E P A WGALLGAC+ +G+ +L EI A +L +EP
Sbjct: 323 SCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGEIELAEIAARELLMVEP 382
Query: 304 QNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQKIPGCS 344
+N ANY+LL IY + R + +R +M+E V+ PG S
Sbjct: 383 ENPANYVLLGKIYMSVGRQEEAERLRLKMKESGVKVSPGSS 423
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 117/260 (45%), Gaps = 44/260 (16%)
Query: 68 VVAWSALISGYVQNGQPNQALKVFLEMESKNVKP-DEFILVSLMSATSQLGHLELAQWVD 126
+++ + +S Y G QAL +FL+M S P D + + + + L V
Sbjct: 12 LISLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVH 71
Query: 127 SYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCG 186
++ KS+ L V ALLDM KC ++ A KLF E+P+R+ V + +MI + G
Sbjct: 72 AHSVKSNF-LSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKV 130
Query: 187 EDAVRLFNSM-----------LMEGLV----------------------PDEVAFTIILT 213
++AV L+ +M +++GLV P+ + +++
Sbjct: 131 KEAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVS 190
Query: 214 ACSHSG---LVDEGWNY-FQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHE 269
ACS G L+ E +Y F+++ I P P + +V+ R G + + SM +
Sbjct: 191 ACSAIGAFRLIKEIHSYAFRNL-----IEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMED 245
Query: 270 PHAGAWGALLGACKLHGDSD 289
AW +L+ A LHGD++
Sbjct: 246 RDVVAWSSLISAYALHGDAE 265
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 218 bits (555), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 115/343 (33%), Positives = 192/343 (55%), Gaps = 2/343 (0%)
Query: 3 QRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQ 62
Q +++ NA++ + K G L AR +FD M EK+ V++ +I GY G + A LF +
Sbjct: 266 QMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSE 325
Query: 63 ATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELA 122
+ W+A+ISG +QN + + F EM +P+ L SL+ + + +L+
Sbjct: 326 MESIGLSTWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGG 385
Query: 123 QWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSI 182
+ + ++ ++ D +V +++D AK G + A ++F R L+++ ++I ++
Sbjct: 386 KEIHAFAIRNGAD-NNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAV 444
Query: 183 HGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPD 242
HG + A LF+ M G PD+V T +L+A +HSG D + F SM KY I P +
Sbjct: 445 HGDSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVE 504
Query: 243 HFACMVDLLSRSGHLGDAYELMKSMH-EPHAGAWGALLGACKLHGDSDLGEIVANQLFEL 301
H+ACMV +LSR+G L DA E + M +P A WGALL + GD ++ ++LFE+
Sbjct: 505 HYACMVSVLSRAGKLSDAMEFISKMPIDPIAKVWGALLNGASVLGDLEIARFACDRLFEM 564
Query: 302 EPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQKIPGCS 344
EP+N NY +++N+Y A RW + +VR++M+ ++KIPG S
Sbjct: 565 EPENTGNYTIMANLYTQAGRWEEAEMVRNKMKRIGLKKIPGTS 607
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/311 (23%), Positives = 136/311 (43%), Gaps = 63/311 (20%)
Query: 10 NAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVV 69
N M+ + K ++ SAR VFD M E++VVS+ +MI GY+++G + ++ K ++
Sbjct: 171 NGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMY-----KAML 225
Query: 70 AWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYV 129
A S + KP+ ++S+ A Q L V +
Sbjct: 226 ACS-------------------------DFKPNGVTVISVFQACGQSSDLIFGLEVHKKM 260
Query: 130 SKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDA 189
++ I + + A++ AKCG++D A LF EM ++D V+Y ++I G HG ++A
Sbjct: 261 IENHIQMDLS-LCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEA 319
Query: 190 VRLFNSM----------LMEGLV---------------------PDEVAFTIILTACSHS 218
+ LF+ M ++ GL+ P+ V + +L + ++S
Sbjct: 320 MALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYS 379
Query: 219 GLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGAL 278
+ +G + + G + ++D ++ G L A + + + AW A+
Sbjct: 380 SNL-KGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAI 438
Query: 279 LGACKLHGDSD 289
+ A +HGDSD
Sbjct: 439 ITAYAVHGDSD 449
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 113/269 (42%), Gaps = 14/269 (5%)
Query: 28 VFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQA 87
VF P+ + S +I Y + A +F++ T ++ +++AL+ Y A
Sbjct: 50 VFSIKPDNFLAS--KLISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYTSREMYFDA 107
Query: 88 LKVFLE------MESKNVKPDEFILVSLMSATSQLGHL---ELAQWVDSYVSKSSIDLQQ 138
+FL S +PD + ++ A S LA+ V +V + D
Sbjct: 108 FSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIRGGFD-SD 166
Query: 139 DHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLM 198
V ++ KC N++ A K+F EM +RD+VS+ SMI G S G ED +++ +ML
Sbjct: 167 VFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKAMLA 226
Query: 199 -EGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHL 257
P+ V + AC S + G + M + + I ++ ++ G L
Sbjct: 227 CSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENH-IQMDLSLCNAVIGFYAKCGSL 285
Query: 258 GDAYELMKSMHEPHAGAWGALLGACKLHG 286
A L M E + +GA++ HG
Sbjct: 286 DYARALFDEMSEKDSVTYGAIISGYMAHG 314
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 218 bits (554), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 127/347 (36%), Positives = 201/347 (57%), Gaps = 7/347 (2%)
Query: 5 NVASWNAMLCGFVKDGDLSSARGVFDAMPE-KNVVSFTTMIDGYAKAGDMAAARFLFEQA 63
++ S N ++ ++K+GDL A +F+ + + VS+T+MIDGY +AGD++ A LF++
Sbjct: 367 DLQSCNIIINRYLKNGDLERAETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKL 426
Query: 64 TEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQ 123
+KD V W+ +ISG VQN +A + +M +KP L+S+ +L+ +
Sbjct: 427 HDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGK 486
Query: 124 WVDSYVSKSSIDLQQDHVIA-ALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSI 182
+ ++K++ D ++ +L+ M AKCG ++ A ++F +M ++D VS+ SMI GLS
Sbjct: 487 HIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKDTVSWNSMIMGLSH 546
Query: 183 HGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPD 242
HG + A+ LF ML G P+ V F +L+ACSHSGL+ G F++MK+ Y I P D
Sbjct: 547 HGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAMKETYSIQPGID 606
Query: 243 HFACMVDLLSRSGHLGDAYELMKSM-HEPHAGAWGALLGACKLH-GDSD---LGEIVANQ 297
H+ M+DLL R+G L +A E + ++ P +GALLG C L+ D D + E A +
Sbjct: 607 HYISMIDLLGRAGKLKEAEEFISALPFTPDHTVYGALLGLCGLNWRDKDAEGIAERAAMR 666
Query: 298 LFELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQKIPGCS 344
L EL+P NA ++ L N+YA R +R M + V+K PGCS
Sbjct: 667 LLELDPVNAPGHVALCNVYAGLGRHDMEKEMRKEMGIKGVKKTPGCS 713
Score = 117 bits (294), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 94/361 (26%), Positives = 166/361 (45%), Gaps = 76/361 (21%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLF 60
MP R+V SWNAM+ G++++ + A+ +F M EKNVV++T+M+ GY + GD+ A LF
Sbjct: 195 MPSRDVVSWNAMIKGYIENDGMEEAKLLFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLF 254
Query: 61 EQATEKDVVAWSALISGYVQNGQPNQALKVFLEMES--KNVKPDEFILVSLMSATSQLG- 117
+ E+++V+W+A+ISG+ N +AL +FLEM+ V P+ L+SL A LG
Sbjct: 255 CEMPERNIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGV 314
Query: 118 ---------HLELAQ--WV----DSYVSKS--------------------SIDLQQDHVI 142
H ++ W D ++KS S DLQ ++I
Sbjct: 315 EFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNESFDLQSCNII 374
Query: 143 AALLDMNAKCGNMDRA--------------------------------LKLFKEMPKRDL 170
++ K G+++RA LF+++ +D
Sbjct: 375 ---INRYLKNGDLERAETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDG 431
Query: 171 VSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQS 230
V++ MI GL + +A L + M+ GL P ++++L++ + +D+G +
Sbjct: 432 VTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQG-KHIHC 490
Query: 231 MKQKYGISPSPDHFA--CMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHGDS 288
+ K PD +V + ++ G + DAYE+ M + +W +++ HG +
Sbjct: 491 VIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKDTVSWNSMIMGLSHHGLA 550
Query: 289 D 289
D
Sbjct: 551 D 551
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 123/242 (50%), Gaps = 29/242 (11%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLF 60
MP+RN+ + NAML G+VK ++ A +F MP KNVVS+T M+ G A LF
Sbjct: 103 MPERNIVTCNAMLTGYVKCRRMNEAWTLFREMP-KNVVSWTVMLTALCDDGRSEDAVELF 161
Query: 61 EQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLE 120
++ E++VV+W+ L++G ++NG +A +VF M S++V +++ + +E
Sbjct: 162 DEMPERNVVSWNTLVTGLIRNGDMEKAKQVFDAMPSRDVVSWN----AMIKGYIENDGME 217
Query: 121 LAQWVDSYVSKSSIDLQQDHVIAALLDMNAKC--GNMDRALKLFKEMPKRDLVSYCSMIQ 178
A+ + D+ + +V+ + C G++ A +LF EMP+R++VS+ +MI
Sbjct: 218 EAKLLFG-------DMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMIS 270
Query: 179 GLSIHGCGEDAVRLFNSML--MEGLVPDEVAFTIILTACS-------------HSGLVDE 223
G + + +A+ LF M ++ + P+ + AC H+ ++
Sbjct: 271 GFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISN 330
Query: 224 GW 225
GW
Sbjct: 331 GW 332
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 124/240 (51%), Gaps = 18/240 (7%)
Query: 3 QRNVASWNAMLCGFVKDGDLSSARGVFDAMPEK----NVVSFTTMIDGYAKAGDMAAARF 58
+R ++ A++ + +G L AR + D +P++ VV +T+++ YAK G + AR
Sbjct: 39 RRGFSNEEALILRRLSEGGLVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARV 98
Query: 59 LFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGH 118
LFE E+++V +A+++GYV+ + N+A +F EM KNV +L +L
Sbjct: 99 LFEVMPERNIVTCNAMLTGYVKCRRMNEAWTLFREM-PKNVVSWTVMLTALCDDGRSEDA 157
Query: 119 LELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQ 178
+EL D ++ + + ++ L+ + G+M++A ++F MP RD+VS+ +MI+
Sbjct: 158 VEL---FDEMPERNVV--SWNTLVTGLI----RNGDMEKAKQVFDAMPSRDVVSWNAMIK 208
Query: 179 GLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGIS 238
G + E+A LF M + + V +T ++ G V E + F M ++ +S
Sbjct: 209 GYIENDGMEEAKLLFGDMSEKNV----VTWTSMVYGYCRYGDVREAYRLFCEMPERNIVS 264
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 217 bits (553), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 125/381 (32%), Positives = 205/381 (53%), Gaps = 43/381 (11%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAM----PEKNVVSF---------------- 40
+ +++V SW+ ++ +V++G + A VF+ M E NV +
Sbjct: 224 IAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQG 283
Query: 41 -------------------TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQN 81
T ++D Y K A +F + KDVV+W ALISG+ N
Sbjct: 284 RKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLN 343
Query: 82 GQPNQALKVF-LEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDH 140
G +++++ F + + N +PD ++V ++ + S+LG LE A+ SYV K D
Sbjct: 344 GMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFD-SNPF 402
Query: 141 VIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEG 200
+ A+L+++ ++CG++ A K+F + +D V + S+I G IHG G A+ FN M+
Sbjct: 403 IGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSS 462
Query: 201 LV-PDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGD 259
V P+EV F IL+ACSH+GL+ EG F+ M Y ++P+ +H+A +VDLL R G L
Sbjct: 463 EVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDT 522
Query: 260 AYELMKSM-HEPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAA 318
A E+ K M P G LLGAC++H + ++ E VA +LFELE +A Y+L+SN+Y
Sbjct: 523 AIEITKRMPFSPTPQILGTLLGACRIHQNGEMAETVAKKLFELESNHAGYYMLMSNVYGV 582
Query: 319 AERWIDVSLVRSRMRERSVQK 339
W +V +R+ +++R ++K
Sbjct: 583 KGEWENVEKLRNSVKQRGIKK 603
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/327 (25%), Positives = 154/327 (47%), Gaps = 43/327 (13%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVF-------DAMPEK----NVVSFTT------- 42
+ + ++ +W++M+ GF K+G A F D P++ +VS T
Sbjct: 122 LEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRL 181
Query: 43 ----------------------MIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQ 80
+++ YAK+ A LF+ EKDV++WS +I+ YVQ
Sbjct: 182 GRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQ 241
Query: 81 NGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDH 140
NG +AL VF +M +P+ ++ ++ A + LE + + ++ +
Sbjct: 242 NGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVK- 300
Query: 141 VIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLME- 199
V AL+DM KC + + A +F +P++D+VS+ ++I G +++G ++ F+ ML+E
Sbjct: 301 VSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLEN 360
Query: 200 GLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGD 259
PD + +L +CS G +++ F S KYG +P A +V+L SR G LG+
Sbjct: 361 NTRPDAILMVKVLGSCSELGFLEQA-KCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGN 419
Query: 260 AYELMKSMHEPHAGAWGALLGACKLHG 286
A ++ + W +L+ +HG
Sbjct: 420 ASKVFNGIALKDTVVWTSLITGYGIHG 446
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 142/283 (50%), Gaps = 17/283 (6%)
Query: 7 ASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEK 66
++ M+ GFVK D ++ +++I Y K G M A +F++ +
Sbjct: 76 VNYGEMIHGFVKK----------DVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKP 125
Query: 67 DVVAWSALISGYVQNGQPNQALKVFLEM-ESKNVKPDEFILVSLMSATSQLGHLELAQWV 125
D+V WS+++SG+ +NG P QA++ F M + +V PD L++L+SA ++L + L + V
Sbjct: 126 DIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCV 185
Query: 126 DSYVSKS--SIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIH 183
+V + S DL ++ +LL+ AK A+ LFK + ++D++S+ ++I +
Sbjct: 186 HGFVIRRGFSNDLS---LVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQN 242
Query: 184 GCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDH 243
G +A+ +FN M+ +G P+ +L AC+ + +++G + +K G+
Sbjct: 243 GAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRK-GLETEVKV 301
Query: 244 FACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHG 286
+VD+ + +AY + + +W AL+ L+G
Sbjct: 302 STALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNG 344
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 118/267 (44%), Gaps = 6/267 (2%)
Query: 56 ARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQ 115
AR +F + T++ + W+ L+ + Q + L F M KPD F L + A +
Sbjct: 13 ARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGE 72
Query: 116 LGHLELAQWVDSYVSKSSIDLQQD-HVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYC 174
L + + + +V K + L D +V ++L+ M KCG M AL++F E+ K D+V++
Sbjct: 73 LREVNYGEMIHGFVKKD-VTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWS 131
Query: 175 SMIQGLSIHGCGEDAVRLFNSMLMEG-LVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQ 233
SM+ G +G AV F M+M + PD V +++AC+ G
Sbjct: 132 SMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLG-RCVHGFVI 190
Query: 234 KYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHGDSDLGEI 293
+ G S +++ ++S +A L K + E +W ++ +G + +
Sbjct: 191 RRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALL 250
Query: 294 VANQLFE--LEPQNAANYILLSNIYAA 318
V N + + EP A +L AA
Sbjct: 251 VFNDMMDDGTEPNVATVLCVLQACAAA 277
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 216 bits (550), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 112/363 (30%), Positives = 210/363 (57%), Gaps = 21/363 (5%)
Query: 2 PQRNVASWNAMLCGFVKDG---------------DLSSARGVFDAMPEK----NVVSFTT 42
P+ + + MLC F++ G DL RG+ + ++ + V +
Sbjct: 217 PRDALIVYVDMLCSFIEPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNV 276
Query: 43 MIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPD 102
++ Y ++G AR +F+ +E++VV W++LIS + + ++ +F +M+ + +
Sbjct: 277 LLKLYMESGLFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFS 336
Query: 103 EFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLF 162
L +++ A S++ L + + + + KS + ++ +L+DM KCG ++ + ++F
Sbjct: 337 WATLTTILPACSRVAALLTGKEIHAQILKSK-EKPDVPLLNSLMDMYGKCGEVEYSRRVF 395
Query: 163 KEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVD 222
M +DL S+ M+ +I+G E+ + LF M+ G+ PD + F +L+ CS +GL +
Sbjct: 396 DVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTE 455
Query: 223 EGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSM-HEPHAGAWGALLGA 281
G + F+ MK ++ +SP+ +H+AC+VD+L R+G + +A +++++M +P A WG+LL +
Sbjct: 456 YGLSLFERMKTEFRVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNS 515
Query: 282 CKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQKIP 341
C+LHG+ +GEI A +LF LEP N NY+++SNIYA A+ W +V +R M++R V+K
Sbjct: 516 CRLHGNVSVGEIAAKELFVLEPHNPGNYVMVSNIYADAKMWDNVDKIREMMKQRGVKKEA 575
Query: 342 GCS 344
GCS
Sbjct: 576 GCS 578
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 118/265 (44%), Gaps = 11/265 (4%)
Query: 40 FTTMIDGYAKAGDMAAARFLFEQATEKDVVA---WSALISGYVQNGQPNQALKVFLEMES 96
+ +I ++ + AR +F+ T+ ++ W+A+ GY +NG P AL V+++M
Sbjct: 170 LSKLITLFSVCRRLDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLC 229
Query: 97 KNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMD 156
++P F + + A L L + + + + + K + Q V LL + + G D
Sbjct: 230 SFIEPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQV-VYNVLLKLYMESGLFD 288
Query: 157 RALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACS 216
A K+F M +R++V++ S+I LS + LF M E + T IL ACS
Sbjct: 289 DARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACS 348
Query: 217 HSGLVDEGWN-YFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAW 275
+ G + Q +K K P ++D+ + G + + + M +W
Sbjct: 349 RVAALLTGKEIHAQILKSKE--KPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASW 406
Query: 276 GALLGACKLHGDSDLGEIVANQLFE 300
+L ++G ++ E++ LFE
Sbjct: 407 NIMLNCYAING--NIEEVI--NLFE 427
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 216 bits (549), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 118/344 (34%), Positives = 188/344 (54%), Gaps = 6/344 (1%)
Query: 6 VASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATE 65
V + N++L + K G A +++ VS+ ++ID K G+ A +F A E
Sbjct: 240 VEAKNSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPE 299
Query: 66 KDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWV 125
K++V W+ +I+GY +NG QAL+ F+EM V D F +++ A S L L + +
Sbjct: 300 KNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMI 359
Query: 126 DSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGC 185
+ +V AL+++ AKCG++ A + F ++ +DLVS+ +M+ +HG
Sbjct: 360 HGCLIHCGFQ-GYAYVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGL 418
Query: 186 GEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFA 245
+ A++L+++M+ G+ PD V F +LT CSHSGLV+EG F+SM + Y I DH
Sbjct: 419 ADQALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVT 478
Query: 246 CMVDLLSRSGHLGDAYELMKS-----MHEPHAGAWGALLGACKLHGDSDLGEIVANQLFE 300
CM+D+ R GHL +A +L + + +W LLGAC H ++LG V+ L
Sbjct: 479 CMIDMFGRGGHLAEAKDLATTYSSLVTDSSNNSSWETLLGACSTHWHTELGREVSKVLKI 538
Query: 301 LEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQKIPGCS 344
EP +++LLSN+Y + RW + VR M ER ++K PGCS
Sbjct: 539 AEPSEEMSFVLLSNLYCSTGRWKEGEDVRREMVERGMKKTPGCS 582
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 135/301 (44%), Gaps = 38/301 (12%)
Query: 37 VVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMES 96
+V T+ I AK+G +A+AR +F+ E D VAW+ +++ Y + G +A+ +F ++
Sbjct: 4 LVRLTSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRF 63
Query: 97 KNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGN-- 154
+ KPD++ +++S + LG+++ + + S V +S V +L+DM KC +
Sbjct: 64 SDAKPDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGF-CASLPVNNSLIDMYGKCSDTL 122
Query: 155 -------------------------------MDRALKLFKEMPKRDLVSYCSMIQGLSIH 183
+ AL +F EMPKR ++ MI G +
Sbjct: 123 SANKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHC 182
Query: 184 GCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDH 243
G E + LF ML PD F+ ++ ACS ++ K G S + +
Sbjct: 183 GKLESCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEA 242
Query: 244 FACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHGDSDLGEIVANQLFELEP 303
++ ++ G DA ++S+ +W +++ AC G+++ A ++F L P
Sbjct: 243 KNSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETE----KALEVFHLAP 298
Query: 304 Q 304
+
Sbjct: 299 E 299
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 141/313 (45%), Gaps = 34/313 (10%)
Query: 10 NAMLCGFVKDGDLSSARGVFDAM--PEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKD 67
N+++ + K D SA VF M +N V++ +++ Y A AA +F + ++
Sbjct: 109 NSLIDMYGKCSDTLSANKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRV 168
Query: 68 VVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATS---------QLGH 118
AW+ +ISG+ G+ L +F EM KPD + SLM+A S ++ H
Sbjct: 169 AFAWNIMISGHAHCGKLESCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVH 228
Query: 119 LELAQ--WVDSYVSKSSI---------------DLQQDHVIA-----ALLDMNAKCGNMD 156
+ + W + +K+S+ +L+ V+ +++D K G +
Sbjct: 229 AVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETE 288
Query: 157 RALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACS 216
+AL++F P++++V++ +MI G +G GE A+R F M+ G+ D A+ +L ACS
Sbjct: 289 KALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACS 348
Query: 217 HSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWG 276
L+ G G +V+L ++ G + +A + +W
Sbjct: 349 GLALLGHG-KMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWN 407
Query: 277 ALLGACKLHGDSD 289
+L A +HG +D
Sbjct: 408 TMLFAFGVHGLAD 420
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 214 bits (546), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 121/388 (31%), Positives = 206/388 (53%), Gaps = 47/388 (12%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVF------DAMPEKNVVSFTT------------ 42
+P+RN+ +WNA + V DG A F D P N ++F
Sbjct: 169 IPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHP--NSITFCAFLNACSDWLHLN 226
Query: 43 -----------------------MIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYV 79
+ID Y K + ++ +F + K+ V+W +L++ YV
Sbjct: 227 LGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYV 286
Query: 80 QNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQD 139
QN + +A ++L V+ +F++ S++SA + + LEL + + ++ K+ ++ +
Sbjct: 287 QNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVE-RTI 345
Query: 140 HVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLME 199
V +AL+DM KCG ++ + + F EMP+++LV+ S+I G + G + A+ LF M
Sbjct: 346 FVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPR 405
Query: 200 GL--VPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHL 257
G P+ + F +L+ACS +G V+ G F SM+ YGI P +H++C+VD+L R+G +
Sbjct: 406 GCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMV 465
Query: 258 GDAYELMKSMH-EPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIY 316
AYE +K M +P WGAL AC++HG LG + A LF+L+P+++ N++LLSN +
Sbjct: 466 ERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTF 525
Query: 317 AAAERWIDVSLVRSRMRERSVQKIPGCS 344
AAA RW + + VR ++ ++K G S
Sbjct: 526 AAAGRWAEANTVREELKGVGIKKGAGYS 553
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/363 (22%), Positives = 150/363 (41%), Gaps = 49/363 (13%)
Query: 2 PQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVV--SFT------------------ 41
P RNV SW +++ G ++G S+A F M + VV FT
Sbjct: 69 PARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGK 128
Query: 42 -------------------TMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNG 82
+ D Y K AR LF++ E+++ W+A IS V +G
Sbjct: 129 QIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDG 188
Query: 83 QPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVI 142
+P +A++ F+E + P+ + ++A S HL L + V +S D V
Sbjct: 189 RPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVS-VC 247
Query: 143 AALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLV 202
L+D KC + + +F EM ++ VS+CS++ + E A L+ + +
Sbjct: 248 NGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVE 307
Query: 203 PDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYE 262
+ + +L+AC+ ++ G + + K + + + +VD+ + G + D+ +
Sbjct: 308 TSDFMISSVLSACAGMAGLELGRS-IHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQ 366
Query: 263 LMKSMHEPHAGAWGALLGACKLHGDSDLGEIVANQLF-ELEPQNAA---NYILLSNIYAA 318
M E + +L+G G D+ A LF E+ P+ NY+ ++ +A
Sbjct: 367 AFDEMPEKNLVTRNSLIGGYAHQGQVDM----ALALFEEMAPRGCGPTPNYMTFVSLLSA 422
Query: 319 AER 321
R
Sbjct: 423 CSR 425
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 119/280 (42%), Gaps = 18/280 (6%)
Query: 10 NAMLCGFVKDGDLSSARGV--FDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKD 67
NA+ ++ G + AR V D+ P + ++ +I+ Y+K +AR + ++
Sbjct: 15 NAISASSMRLGRVVHARIVKTLDSPPPPFLANY--LINMYSKLDHPESARLVLRLTPARN 72
Query: 68 VVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDS 127
VV+W++LISG QNG + AL F EM + V P++F A + L + + +
Sbjct: 73 VVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHA 132
Query: 128 YVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGE 187
K L V + DM K D A KLF E+P+R+L ++ + I G
Sbjct: 133 LAVKCGRILDV-FVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPR 191
Query: 188 DAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGI----SPSPDH 243
+A+ F P+ + F L ACS W + Q +G+ D
Sbjct: 192 EAIEAFIEFRRIDGHPNSITFCAFLNACS-------DWLHLNLGMQLHGLVLRSGFDTDV 244
Query: 244 FAC--MVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGA 281
C ++D + + + + M +A +W +L+ A
Sbjct: 245 SVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAA 284
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 214 bits (545), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 112/331 (33%), Positives = 192/331 (58%), Gaps = 4/331 (1%)
Query: 16 FVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALI 75
+ K G A +F + + + +MI Y G + A+ +FE+ K +++W+++
Sbjct: 363 YSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMT 422
Query: 76 SGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSID 135
+G+ QNG + L+ F +M ++ DE L S++SA + + LEL + V + + +
Sbjct: 423 NGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQV--FARATIVG 480
Query: 136 LQQDHVIAA-LLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFN 194
L D V+++ L+D+ KCG ++ ++F M K D V + SMI G + +G G +A+ LF
Sbjct: 481 LDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFK 540
Query: 195 SMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRS 254
M + G+ P ++ F ++LTAC++ GLV+EG F+SMK +G P +HF+CMVDLL+R+
Sbjct: 541 KMSVAGIRPTQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARA 600
Query: 255 GHLGDAYELMKSM-HEPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLS 313
G++ +A L++ M + W ++L C +G +G+ A ++ ELEP+N+ Y+ LS
Sbjct: 601 GYVEEAINLVEEMPFDVDGSMWSSILRGCVANGYKAMGKKAAEKIIELEPENSVAYVQLS 660
Query: 314 NIYAAAERWIDVSLVRSRMRERSVQKIPGCS 344
I+A + W +LVR MRE +V K PG S
Sbjct: 661 AIFATSGDWESSALVRKLMRENNVTKNPGSS 691
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 143/294 (48%), Gaps = 35/294 (11%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLF 60
MP RN SWN M+ G++ G+ ++ FD MPE++ S+ ++ G+AKAG+++ AR LF
Sbjct: 88 MPDRNYFSWNTMIEGYMNSGEKGTSLRFFDMMPERDGYSWNVVVSGFAKAGELSVARRLF 147
Query: 61 EQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLE 120
EKDVV ++L+ GY+ NG +AL++F E+ N D L +++ A ++L L+
Sbjct: 148 NAMPEKDVVTLNSLLHGYILNGYAEEALRLFKEL---NFSADAITLTTVLKACAELEALK 204
Query: 121 LAQWV-----------DSYVSKSSID--------------LQQ-----DHVIAALLDMNA 150
+ + DS ++ S ++ L+Q DH ++AL+ A
Sbjct: 205 CGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALISGYA 264
Query: 151 KCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTI 210
CG ++ + LF R ++ + SMI G + +A+ LFN M E D
Sbjct: 265 NCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMRNETR-EDSRTLAA 323
Query: 211 ILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELM 264
++ AC G ++ G K+G+ + ++D+ S+ G +A +L
Sbjct: 324 VINACIGLGFLETG-KQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLF 376
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 140/303 (46%), Gaps = 36/303 (11%)
Query: 16 FVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALI 75
+ K GDL A + + + E + S + +I GYA G + +R LF++ + + V+ W+++I
Sbjct: 232 YAKCGDLRMASYMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMI 291
Query: 76 SGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSID 135
SGY+ N +AL +F EM ++ + D L ++++A LG LE + + + K
Sbjct: 292 SGYIANNMKMEALVLFNEMRNE-TREDSRTLAAVINACIGLGFLETGKQMHCHACK--FG 348
Query: 136 LQQDHVIAA-LLDMNAKCGNMDRALKLFKEMPKRD------------------------- 169
L D V+A+ LLDM +KCG+ A KLF E+ D
Sbjct: 349 LIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFE 408
Query: 170 ------LVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDE 223
L+S+ SM G S +GC + + F+ M L DEV+ + +++AC+ ++
Sbjct: 409 RIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLEL 468
Query: 224 GWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACK 283
G F + G+ + ++DL + G + + +M + W +++
Sbjct: 469 GEQVF-ARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYA 527
Query: 284 LHG 286
+G
Sbjct: 528 TNG 530
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 214 bits (545), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 121/387 (31%), Positives = 207/387 (53%), Gaps = 42/387 (10%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEK------------------------- 35
+P ++V W M+ G ++ G A VF M +
Sbjct: 306 IPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLG 365
Query: 36 --------------NVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQN 81
+ + ++I YAK G + + +FE+ E+D+V+W+A+ISGY QN
Sbjct: 366 ASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQN 425
Query: 82 GQPNQALKVFLEMESKNVKP-DEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDH 140
+AL +F EM+ K V+ D F +VSL+ A S G L + + + V +S I
Sbjct: 426 VDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIR-PCSL 484
Query: 141 VIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEG 200
V AL+DM +KCG ++ A + F + +D+VS+ +I G HG G+ A+ +++ L G
Sbjct: 485 VDTALVDMYSKCGYLEAAQRCFDSISWKDVVSWGILIAGYGFHGKGDIALEIYSEFLHSG 544
Query: 201 LVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDA 260
+ P+ V F +L++CSH+G+V +G F SM + +G+ P+ +H AC+VDLL R+ + DA
Sbjct: 545 MEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNHEHLACVVDLLCRAKRIEDA 604
Query: 261 YELMK-SMHEPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAA 319
++ K + P G +L AC+ +G +++ +I+ + EL+P +A +Y+ L + +AA
Sbjct: 605 FKFYKENFTRPSIDVLGIILDACRANGKTEVEDIICEDMIELKPGDAGHYVKLGHSFAAM 664
Query: 320 ERWIDVSLVRSRMRERSVQKIPGCSKL 346
+RW DVS ++MR ++K+PG SK+
Sbjct: 665 KRWDDVSESWNQMRSLGLKKLPGWSKI 691
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 123/244 (50%), Gaps = 2/244 (0%)
Query: 36 NVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEME 95
++ +M++ Y K + A+ LF+Q ++D+V+W+ +ISGY G ++ LK+ M
Sbjct: 178 DIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMR 237
Query: 96 SKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNM 155
++PD+ + +S + + LE+ + + + K+ D+ H+ AL+ M KCG
Sbjct: 238 GDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDM-HLKTALITMYLKCGKE 296
Query: 156 DRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTAC 215
+ + ++ + +P +D+V + MI GL G E A+ +F+ ML G A ++ +C
Sbjct: 297 EASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASC 356
Query: 216 SHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAW 275
+ G D G + ++G + ++ + ++ GHL + + + M+E +W
Sbjct: 357 AQLGSFDLGAS-VHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSW 415
Query: 276 GALL 279
A++
Sbjct: 416 NAII 419
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 92/168 (54%), Gaps = 4/168 (2%)
Query: 41 TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVK 100
+++++ YAK G +A AR +FE+ E+DVV W+A+I Y + G +A + EM + +K
Sbjct: 85 SSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIK 144
Query: 101 PDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALK 160
P L+ ++S ++ L Q + + D V+ ++L++ KC ++ A
Sbjct: 145 PGPVTLLEMLSGVLEITQL---QCLHDFAVIYGFDCDIA-VMNSMLNLYCKCDHVGDAKD 200
Query: 161 LFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAF 208
LF +M +RD+VS+ +MI G + G + ++L M +GL PD+ F
Sbjct: 201 LFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTF 248
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 88/200 (44%), Gaps = 7/200 (3%)
Query: 81 NGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDH 140
+G Q L F M + + PD F SL+ A + L L + V + +
Sbjct: 24 HGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVLVNGFS-SDFY 82
Query: 141 VIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEG 200
+ ++L+++ AK G + A K+F+EM +RD+V + +MI S G +A L N M +G
Sbjct: 83 ISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQG 142
Query: 201 LVPDEVAFTIILTACSHSGLVD-EGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGD 259
+ P V +L SG+++ YG M++L + H+GD
Sbjct: 143 IKPGPVTLLEML-----SGVLEITQLQCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGD 197
Query: 260 AYELMKSMHEPHAGAWGALL 279
A +L M + +W ++
Sbjct: 198 AKDLFDQMEQRDMVSWNTMI 217
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 213 bits (543), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 125/386 (32%), Positives = 202/386 (52%), Gaps = 41/386 (10%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAM------PEKNVVSF-------------- 40
+P ++ A W +M+ GF + G L A G+F M P+++ ++
Sbjct: 511 IPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRG 570
Query: 41 -------------------TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQN 81
+ +++ Y+K G + AR ++++ E D V+ S+LISGY Q+
Sbjct: 571 KEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQH 630
Query: 82 GQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHV 141
G +F +M D F + S++ A + L V +Y++K + + V
Sbjct: 631 GLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESSLGAQVHAYITKIGL-CTEPSV 689
Query: 142 IAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGL 201
++LL M +K G++D K F ++ DL+++ ++I + HG +A++++N M +G
Sbjct: 690 GSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIASYAQHGKANEALQVYNLMKEKGF 749
Query: 202 VPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAY 261
PD+V F +L+ACSH GLV+E + + SM + YGI P H+ CMVD L RSG L +A
Sbjct: 750 KPDKVTFVGVLSACSHGGLVEESYFHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAE 809
Query: 262 ELMKSMH-EPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAE 320
+ +MH +P A WG LL ACK+HG+ +LG++ A + ELEP +A YI LSNI A
Sbjct: 810 SFINNMHIKPDALVWGTLLAACKIHGEVELGKVAAKKAIELEPSDAGAYISLSNILAEVG 869
Query: 321 RWIDVSLVRSRMRERSVQKIPGCSKL 346
W +V R M+ VQK PG S +
Sbjct: 870 EWDEVEETRKLMKGTGVQKEPGWSSV 895
Score = 108 bits (269), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 150/328 (45%), Gaps = 49/328 (14%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMP----EKNVVSFTTMIDG---------- 46
+P +V SW ML G+ K D SA +F M E N + T++I
Sbjct: 311 IPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEA 370
Query: 47 -------------------------YAKAGDMAAARFLFEQATE---KDVVAWSALISGY 78
Y+K+GD+ + +FE + +++V + +I+ +
Sbjct: 371 SQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV--NVMITSF 428
Query: 79 VQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQ 138
Q+ +P +A+++F M + ++ DEF + SL+S L L L + V Y KS + L
Sbjct: 429 SQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSV---LDCLNLGKQVHGYTLKSGLVLDL 485
Query: 139 DHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLM 198
V ++L + +KCG+++ + KLF+ +P +D + SMI G + +G +A+ LF+ ML
Sbjct: 486 T-VGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLD 544
Query: 199 EGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLG 258
+G PDE +LT CS + G + GI D + +V++ S+ G L
Sbjct: 545 DGTSPDESTLAAVLTVCSSHPSLPRG-KEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLK 603
Query: 259 DAYELMKSMHEPHAGAWGALLGACKLHG 286
A ++ + E + +L+ HG
Sbjct: 604 LARQVYDRLPELDPVSCSSLISGYSQHG 631
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 126/257 (49%), Gaps = 14/257 (5%)
Query: 35 KNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEM 94
++V T ++D YAK G MA A +F + VV+W+ ++SGY ++ AL++F EM
Sbjct: 283 EDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEM 342
Query: 95 ESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGN 154
V+ + + S++SA + + A V ++V KS L V AAL+ M +K G+
Sbjct: 343 RHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSS-VAAALISMYSKSGD 401
Query: 155 MDRALKLFKEM---PKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTII 211
+D + ++F+++ ++++V+ MI S A+RLF ML EGL DE + +
Sbjct: 402 IDLSEQVFEDLDDIQRQNIVNV--MITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSL 459
Query: 212 LTA--CSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHE 269
L+ C + G G+ + + S + L S+ G L ++Y+L + +
Sbjct: 460 LSVLDCLNLGKQVHGYTLKSGLVLDLTVGSS------LFTLYSKCGSLEESYKLFQGIPF 513
Query: 270 PHAGAWGALLGACKLHG 286
W +++ +G
Sbjct: 514 KDNACWASMISGFNEYG 530
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 121/253 (47%), Gaps = 13/253 (5%)
Query: 29 FDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQAL 88
FD K+++S+ Y+ +G MA A LF+ + DVV+ + +ISGY Q+ ++L
Sbjct: 82 FDVFLTKSLLSW------YSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESL 135
Query: 89 KVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDM 148
+ F +M + +E S++SA S L ++ V + K + V +AL+D+
Sbjct: 136 RFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYE-VVESALIDV 194
Query: 149 NAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAF 208
+K + A K+F++ ++ + ++I G + LF+ M + PD +
Sbjct: 195 FSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTY 254
Query: 209 TIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFAC--MVDLLSRSGHLGDAYELMKS 266
+ +L AC+ E + + ++ + + D F C +VDL ++ GH+ +A E+
Sbjct: 255 SSVLAACASL----EKLRFGKVVQARVIKCGAEDVFVCTAIVDLYAKCGHMAEAMEVFSR 310
Query: 267 MHEPHAGAWGALL 279
+ P +W +L
Sbjct: 311 IPNPSVVSWTVML 323
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 213 bits (542), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 117/309 (37%), Positives = 187/309 (60%), Gaps = 8/309 (2%)
Query: 43 MIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPD 102
+I Y + AR +F++ TE++VV+W+++++ V+NG+ N + F EM K PD
Sbjct: 154 LIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLVFECFCEMIGKRFCPD 213
Query: 103 EFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLF 162
E +V L+SA G+L L + V S V ++L + AL+DM AK G ++ A +F
Sbjct: 214 ETTMVVLLSACG--GNLSLGKLVHSQVMVRELELNC-RLGTALVDMYAKSGGLEYARLVF 270
Query: 163 KEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLV-PDEVAFTIILTACSHSGLV 221
+ M +++ ++ +MI GL+ +G E+A++LF+ M+ E V P+ V F +L ACSH+GLV
Sbjct: 271 ERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGVLCACSHTGLV 330
Query: 222 DEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSM-HEPHAGAWGALLG 280
D+G+ YF M++ + I P H+ MVD+L R+G L +AY+ +K M EP A W LL
Sbjct: 331 DDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYDFIKKMPFEPDAVVWRTLLS 390
Query: 281 ACKLHGDSD---LGEIVANQLFELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSV 337
AC +H D D +GE V +L ELEP+ + N ++++N +A A W + + VR M+E +
Sbjct: 391 ACSIHHDEDDEGIGEKVKKRLIELEPKRSGNLVIVANRFAEARMWAEAAEVRRVMKETKM 450
Query: 338 QKIPGCSKL 346
+KI G S L
Sbjct: 451 KKIAGESCL 459
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 106/229 (46%), Gaps = 53/229 (23%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAM------PEKNVVSF-------------- 40
M +RNV SWN+++ V++G L+ F M P++ +
Sbjct: 174 MTERNVVSWNSIMTALVENGKLNLVFECFCEMIGKRFCPDETTMVVLLSACGGNLSLGKL 233
Query: 41 -----------------TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQ 83
T ++D YAK+G + AR +FE+ +K+V WSA+I G Q G
Sbjct: 234 VHSQVMVRELELNCRLGTALVDMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGF 293
Query: 84 PNQALKVFLE-MESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVI 142
+AL++F + M+ +V+P+ + ++ A S G ++ D Y K ++++ H I
Sbjct: 294 AEEALQLFSKMMKESSVRPNYVTFLGVLCACSHTGLVD-----DGY--KYFHEMEKIHKI 346
Query: 143 -------AALLDMNAKCGNMDRALKLFKEMP-KRDLVSYCSMIQGLSIH 183
A++D+ + G ++ A K+MP + D V + +++ SIH
Sbjct: 347 KPMMIHYGAMVDILGRAGRLNEAYDFIKKMPFEPDAVVWRTLLSACSIH 395
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 125/285 (43%), Gaps = 11/285 (3%)
Query: 37 VVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMES 96
++S + + A D+A AR L +++ W+ L GY + P +++ V+ EM+
Sbjct: 47 IISELVRVSSLSLAKDLAFARTLLLHSSDSTPSTWNMLSRGYSSSDSPVESIWVYSEMKR 106
Query: 97 KNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMD 156
+ +KP++ L+ A + L + + V K D +V L+ + C
Sbjct: 107 RGIKPNKLTFPFLLKACASFLGLTAGRQIQVEVLKHGFDFDV-YVGNNLIHLYGTCKKTS 165
Query: 157 RALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACS 216
A K+F EM +R++VS+ S++ L +G F M+ + PDE ++L+AC
Sbjct: 166 DARKVFDEMTERNVVSWNSIMTALVENGKLNLVFECFCEMIGKRFCPDETTMVVLLSACG 225
Query: 217 HSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWG 276
L + Q M ++ ++ +VD+ ++SG L A + + M + + W
Sbjct: 226 -GNLSLGKLVHSQVMVRELELNCRLG--TALVDMYAKSGGLEYARLVFERMVDKNVWTWS 282
Query: 277 ALLGACKLHGDSDLGEIVANQLFE---LEPQNAANYILLSNIYAA 318
A++ +G ++ A QLF E NY+ + A
Sbjct: 283 AMIVGLAQYGFAE----EALQLFSKMMKESSVRPNYVTFLGVLCA 323
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 213 bits (542), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 128/389 (32%), Positives = 197/389 (50%), Gaps = 46/389 (11%)
Query: 1 MPQRNVASWNAMLCGF-----VKDGDLSSARGVFDAM------PEKNVVSF--------- 40
MP +NV ++NAM+ GF + D S A +F M P + S
Sbjct: 313 MPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAK 372
Query: 41 ------------------------TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALIS 76
+ +I+ YA G F +++D+ +W+++I
Sbjct: 373 TLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMID 432
Query: 77 GYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDL 136
+VQN Q A +F ++ S +++P+E+ + +MSA + L + + Y KS ID
Sbjct: 433 CHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDA 492
Query: 137 QQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSM 196
V + + M AK GNM A ++F E+ D+ +Y +MI L+ HG +A+ +F SM
Sbjct: 493 FTS-VKTSSISMYAKSGNMPLANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESM 551
Query: 197 LMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGH 256
G+ P++ AF +L AC H GLV +G YFQ MK Y I+P+ HF C+VDLL R+G
Sbjct: 552 KTHGIKPNQQAFLGVLIACCHGGLVTQGLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGR 611
Query: 257 LGDAYEL-MKSMHEPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNI 315
L DA L + S + H W ALL +C+++ DS +G+ VA +L ELEP+ + +Y+LL NI
Sbjct: 612 LSDAENLILSSGFQDHPVTWRALLSSCRVYKDSVIGKRVAERLMELEPEASGSYVLLHNI 671
Query: 316 YAAAERWIDVSLVRSRMRERSVQKIPGCS 344
Y + VR MR+R V+K P S
Sbjct: 672 YNDSGVNSSAEEVRELMRDRGVKKEPALS 700
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 86/337 (25%), Positives = 146/337 (43%), Gaps = 71/337 (21%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKN------------------------ 36
MP+RN+ S+N+++ G+ + G A +F E N
Sbjct: 108 MPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLG 167
Query: 37 ---------------VVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQN 81
V +ID Y+K G + A LF++ E+D V+W++LISGYV+
Sbjct: 168 ELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRV 227
Query: 82 GQPNQALKVFLEMESKNVKPDEFILVSLMSATS---QLGHLELAQWVDSYVSKSSIDLQQ 138
G + L + +M + + L S++ A G +E + Y +K + ++
Sbjct: 228 GAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAK--LGMEF 285
Query: 139 DHVI-AALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGL-----SIHGCGEDAVRL 192
D V+ ALLDM AK G++ A+KLF MP +++V+Y +MI G +A +L
Sbjct: 286 DIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKL 345
Query: 193 FNSMLMEGLVPDEVAFTIILTACSHSGLVDEGW--------NYFQSMKQKYGISPSPDHF 244
F M GL P F+++L ACS + ++ G N FQS D F
Sbjct: 346 FMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQS-----------DEF 394
Query: 245 --ACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALL 279
+ +++L + G D + S + +W +++
Sbjct: 395 IGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMI 431
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 139/282 (49%), Gaps = 12/282 (4%)
Query: 47 YAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFIL 106
Y K ++ AR LF++ E++++++++LISGY Q G QA+++FLE N+K D+F
Sbjct: 92 YCKCRELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTY 151
Query: 107 VSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMP 166
+ + L+L + + V + + QQ +I L+DM +KCG +D+A+ LF
Sbjct: 152 AGALGFCGERCDLDLGELLHGLVVVNGLS-QQVFLINVLIDMYSKCGKLDQAMSLFDRCD 210
Query: 167 KRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACS---HSGLVDE 223
+RD VS+ S+I G G E+ + L M +GL A +L AC + G +++
Sbjct: 211 ERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEK 270
Query: 224 GWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALL-GAC 282
G K G+ ++D+ +++G L +A +L M + + A++ G
Sbjct: 271 GMA-IHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFL 329
Query: 283 KLHGDSDLGEIVANQLF------ELEPQNAANYILLSNIYAA 318
++ +D A +LF LEP + ++L AA
Sbjct: 330 QMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAA 371
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 131/266 (49%), Gaps = 17/266 (6%)
Query: 34 EKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQ-----NGQPNQAL 88
E ++V T ++D YAK G + A LF K+VV ++A+ISG++Q + ++A
Sbjct: 284 EFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAF 343
Query: 89 KVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVI-AALLD 147
K+F++M+ + ++P ++ A S LE + + + + K+ + Q D I +AL++
Sbjct: 344 KLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKN--NFQSDEFIGSALIE 401
Query: 148 MNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVA 207
+ A G+ + ++ F K+D+ S+ SMI + E A LF + + P+E
Sbjct: 402 LYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYT 461
Query: 208 FTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACM----VDLLSRSGHLGDAYEL 263
+++++AC+ + G Q Y I D F + + + ++SG++ A ++
Sbjct: 462 VSLMMSACADFAALSSGEQI-----QGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQV 516
Query: 264 MKSMHEPHAGAWGALLGACKLHGDSD 289
+ P + A++ + HG ++
Sbjct: 517 FIEVQNPDVATYSAMISSLAQHGSAN 542
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 57/132 (43%), Gaps = 1/132 (0%)
Query: 148 MNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVA 207
M KC + A +LF MP+R+++S+ S+I G + G E A+ LF L D+
Sbjct: 91 MYCKCRELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFT 150
Query: 208 FTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSM 267
+ L C +D G + G+S ++D+ S+ G L A L
Sbjct: 151 YAGALGFCGERCDLDLG-ELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRC 209
Query: 268 HEPHAGAWGALL 279
E +W +L+
Sbjct: 210 DERDQVSWNSLI 221
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 212 bits (540), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 111/312 (35%), Positives = 187/312 (59%), Gaps = 6/312 (1%)
Query: 41 TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVK 100
T ++ Y + + AR +F++ + DVV W L++GYV+ G ++ L+VF EM K ++
Sbjct: 156 TGVLRIYVEDKLLLDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLE 215
Query: 101 PDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALK 160
PDEF + + ++A +Q+G L +W+ +V K S V AL+DM AKCG ++ A++
Sbjct: 216 PDEFSVTTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVE 275
Query: 161 LFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLME-GLVPDEVAFTIILTACSHSG 219
+FK++ +R++ S+ ++I G + +G + A+ + E G+ PD V +L AC+H G
Sbjct: 276 VFKKLTRRNVFSWAALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGG 335
Query: 220 LVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSM-HEPHAGAWGAL 278
++EG + ++M+ +Y I+P +H++C+VDL+ R+G L DA L++ M +P A WGAL
Sbjct: 336 FLEEGRSMLENMEARYEITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGAL 395
Query: 279 LGACKLHGDSDLGEIVANQLFELEPQNA----ANYILLSNIYAAAERWIDVSLVRSRMRE 334
L C+ H + +LGE+ L +LE N A + LSNIY + +R + S VR + +
Sbjct: 396 LNGCRTHKNVELGELAVKNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEASKVRGMIEQ 455
Query: 335 RSVQKIPGCSKL 346
R V+K PG S L
Sbjct: 456 RGVRKTPGWSVL 467
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 111/231 (48%), Gaps = 3/231 (1%)
Query: 59 LFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEM---ESKNVKPDEFILVSLMSATSQ 115
+F+ + + +I ++ QP+ L+ FL M E +++ P L+ A +
Sbjct: 69 IFDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDIAPSYLTFHFLIVACLK 128
Query: 116 LGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCS 175
+ + + +V K+ + L HV +L + + + A K+F E+P+ D+V +
Sbjct: 129 ACFFSVGKQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQPDVVKWDV 188
Query: 176 MIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKY 235
++ G G G + + +F ML++GL PDE + T LTAC+ G + +G + +K+K
Sbjct: 189 LMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKS 248
Query: 236 GISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHG 286
I +VD+ ++ G + A E+ K + + +W AL+G +G
Sbjct: 249 WIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAAYG 299
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 133/288 (46%), Gaps = 50/288 (17%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAM---------------------------- 32
+PQ +V W+ ++ G+V+ G S VF M
Sbjct: 178 IPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQG 237
Query: 33 ------------PEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQ 80
E +V T ++D YAK G + A +F++ T ++V +W+ALI GY
Sbjct: 238 KWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAA 297
Query: 81 NGQPNQALKVFLEMESKN-VKPDEFILVSLMSATSQLGHLELAQ-WVDSYVSKSSIDLQQ 138
G +A+ +E ++ +KPD +L+ +++A + G LE + +++ ++ I +
Sbjct: 298 YGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEARYEITPKH 357
Query: 139 DHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVS-YCSMIQGLSIHG---CGEDAVRLFN 194
+H + ++D+ + G +D AL L ++MP + L S + +++ G H GE AV+ N
Sbjct: 358 EHY-SCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVK--N 414
Query: 195 SMLME-GLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSP 241
+ +E G V +E A + L+ S + + + M ++ G+ +P
Sbjct: 415 LLDLEKGNVEEEEAALVQLSNIYFSVQRNPEASKVRGMIEQRGVRKTP 462
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 212 bits (540), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 116/346 (33%), Positives = 205/346 (59%), Gaps = 10/346 (2%)
Query: 8 SWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATE-- 65
S NA++ + K G + A +F + K + S+ ++I + AG + A LF + E
Sbjct: 331 SRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFSELEEMN 390
Query: 66 ------KDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHL 119
+VV W+++I G G+ + +L+ F +M+ V + + ++S ++L L
Sbjct: 391 HVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVTICCILSICAELPAL 450
Query: 120 ELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQG 179
L + + +V ++S+ + V AL++M AKCG + +F+ + +DL+S+ S+I+G
Sbjct: 451 NLGREIHGHVIRTSMS-ENILVQNALVNMYAKCGLLSEGSLVFEAIRDKDLISWNSIIKG 509
Query: 180 LSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISP 239
+HG E A+ +F+ M+ G PD +A +L+ACSH+GLV++G F SM +++G+ P
Sbjct: 510 YGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLVEKGREIFYSMSKRFGLEP 569
Query: 240 SPDHFACMVDLLSRSGHLGDAYELMKSM-HEPHAGAWGALLGACKLHGDSDLGEIVANQL 298
+H+AC+VDLL R G L +A E++K+M EP GALL +C++H + D+ E +A+QL
Sbjct: 570 QQEHYACIVDLLGRVGFLKEASEIVKNMPMEPKVCVLGALLNSCRMHKNVDIAEGIASQL 629
Query: 299 FELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQKIPGCS 344
LEP+ +Y+LLSNIY+A RW + + VR+ +++ ++K+ G S
Sbjct: 630 SVLEPERTGSYMLLSNIYSAGGRWEESANVRALAKKKDLKKVSGSS 675
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 100/195 (51%), Gaps = 6/195 (3%)
Query: 42 TMIDGYAKAGDMAAARFLFEQATE---KDVVAWSALISGYVQNGQPNQALKVFLEMESKN 98
+I YA+ G + AR +FE + D+ W++++ V +G AL+++ M +
Sbjct: 94 NLISVYARLGLLLDARNVFETVSLVLLSDLRLWNSILKANVSHGLYENALELYRGMRQRG 153
Query: 99 VKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQD-HVIAALLDMNAKCGNMDR 157
+ D +IL ++ A LG L + + V + I L+++ HV+ LL + K G M
Sbjct: 154 LTGDGYILPLILRACRYLGRFGLCRAFHTQVIQ--IGLKENLHVVNELLTLYPKAGRMGD 211
Query: 158 ALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSH 217
A LF EMP R+ +S+ MI+G S E AV++F M E PDEV +T +L+ S
Sbjct: 212 AYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQ 271
Query: 218 SGLVDEGWNYFQSMK 232
G ++ YF M+
Sbjct: 272 CGKFEDVLKYFHLMR 286
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/327 (21%), Positives = 142/327 (43%), Gaps = 45/327 (13%)
Query: 3 QRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFE- 61
+ N+ N +L + K G + A +F MP +N +S+ MI G+++ D +A +FE
Sbjct: 190 KENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEW 249
Query: 62 ---QATEKDVVAWSALISGYVQNGQPNQALKVFLEME-SKNVKPDEFILVSLMSATSQLG 117
+ + D V W++++S + Q G+ LK F M S N E + V S ++L
Sbjct: 250 MQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAV-FFSVCAELE 308
Query: 118 HLELAQWVDSYVSKSSID-------------------LQQDHVIA-----------ALLD 147
L +A+ V YV K + +H+ +L+
Sbjct: 309 ALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLIT 368
Query: 148 MNAKCGNMDRALKLFKEMP--------KRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLME 199
G +D AL LF E+ K ++V++ S+I+G ++ G G+D++ F M
Sbjct: 369 SFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFS 428
Query: 200 GLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGD 259
++ + V IL+ C+ ++ G + +S + +V++ ++ G L +
Sbjct: 429 KVLANSVTICCILSICAELPALNLG-REIHGHVIRTSMSENILVQNALVNMYAKCGLLSE 487
Query: 260 AYELMKSMHEPHAGAWGALLGACKLHG 286
+ +++ + +W +++ +HG
Sbjct: 488 GSLVFEAIRDKDLISWNSIIKGYGMHG 514
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 211 bits (538), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 117/310 (37%), Positives = 183/310 (59%), Gaps = 11/310 (3%)
Query: 43 MIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVF---LEMESKNV 99
+I Y+K G + A LFE++ K++++W+A+ISG+ NG P + L+ F LE E + +
Sbjct: 427 LISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVR-I 485
Query: 100 KPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRAL 159
PD + L +L+S L L +YV + ++ + AL++M ++CG + +L
Sbjct: 486 LPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHG-QFKETLIGNALINMYSQCGTIQNSL 544
Query: 160 KLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEG-LVPDEVAFTIILTACSHS 218
++F +M ++D+VS+ S+I S HG GE+AV + +M EG ++PD F+ +L+ACSH+
Sbjct: 545 EVFNQMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSACSHA 604
Query: 219 GLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGA---- 274
GLV+EG F SM + +G+ + DHF+C+VDLL R+GHL +A L+K + E G+
Sbjct: 605 GLVEEGLEIFNSMVEFHGVIRNVDHFSCLVDLLGRAGHLDEAESLVK-ISEKTIGSRVDV 663
Query: 275 WGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRE 334
W AL AC HGD LG++VA L E E + + Y+ LSNIYA A W + R +
Sbjct: 664 WWALFSACAAHGDLKLGKMVAKLLMEKEKDDPSVYVQLSNIYAGAGMWKEAEETRRAINM 723
Query: 335 RSVQKIPGCS 344
K GCS
Sbjct: 724 IGAMKQRGCS 733
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 141/277 (50%), Gaps = 14/277 (5%)
Query: 10 NAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVV 69
N +L + + G+L+S + FD + E +V S+TT++ K GD+ A +F++ E+D V
Sbjct: 96 NTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDIEYAFEVFDKMPERDDV 155
Query: 70 A-WSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSY 128
A W+A+I+G ++G ++++F EM V+ D+F +++S G L+ + V S
Sbjct: 156 AIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATILS-MCDYGSLDFGKQVHSL 214
Query: 129 VSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKE--MPKRDLVSYCSMIQGLSIHGCG 186
V K+ + V+ AL+ M C + A +F+E + RD V++ +I GL+ G
Sbjct: 215 VIKAGFFIASS-VVNALITMYFNCQVVVDACLVFEETDVAVRDQVTFNVVIDGLA--GFK 271
Query: 187 ED-AVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNY-FQSMKQKYGISPSPDHF 244
D ++ +F ML L P ++ F ++ +CS + + + ++ +KY + +
Sbjct: 272 RDESLLVFRKMLEASLRPTDLTFVSVMGSCSCAAMGHQVHGLAIKTGYEKYTLVSNA--- 328
Query: 245 ACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGA 281
+ + S G A+++ +S+ E W ++ +
Sbjct: 329 --TMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISS 363
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 124/259 (47%), Gaps = 9/259 (3%)
Query: 34 EKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLE 93
EK + + Y+ D AA +FE EKD+V W+ +IS Y Q A+ V+
Sbjct: 320 EKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKR 379
Query: 94 MESKNVKPDEFILVSLMSATSQLGHLELAQ-WVDSYVSKSSIDLQQDHVIAALLDMNAKC 152
M VKPDEF SL++ + L LE+ Q + + S I++ AL+ +K
Sbjct: 380 MHIIGVKPDEFTFGSLLATSLDLDVLEMVQACIIKFGLSSKIEISN-----ALISAYSKN 434
Query: 153 GNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLME--GLVPDEVAFTI 210
G +++A LF+ +++L+S+ ++I G +G + + F+ +L ++PD +
Sbjct: 435 GQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVRILPDAYTLST 494
Query: 211 ILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEP 270
+L+ C + + G + + ++G ++++ S+ G + ++ E+ M E
Sbjct: 495 LLSICVSTSSLMLG-SQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQMSEK 553
Query: 271 HAGAWGALLGACKLHGDSD 289
+W +L+ A HG+ +
Sbjct: 554 DVVSWNSLISAYSRHGEGE 572
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 75/179 (41%), Gaps = 34/179 (18%)
Query: 75 ISGYVQNGQPNQALKVFLEMES-KNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSS 133
++G ++G+ ALK+F ++ ++PD++ + ++ L V Y +S
Sbjct: 28 LTGLTRSGENRNALKLFADVHRCTTLRPDQYSVSLAITTARHLRDTIFGGQVHCYAIRSG 87
Query: 134 IDLQQDHVIAALLDMNAKCGNM-------------------------------DRALKLF 162
+ L HV LL + + GN+ + A ++F
Sbjct: 88 L-LCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDIEYAFEVF 146
Query: 163 KEMPKRDLVS-YCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGL 220
+MP+RD V+ + +MI G G E +V LF M G+ D+ F IL+ C + L
Sbjct: 147 DKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATILSMCDYGSL 205
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 211 bits (537), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 111/319 (34%), Positives = 191/319 (59%), Gaps = 3/319 (0%)
Query: 28 VFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQA 87
VF E +V ++I+ Y + G+M + +FE+ K +WS+++S G ++
Sbjct: 158 VFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWSEC 217
Query: 88 LKVFLEMESK-NVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALL 146
L +F M S+ N+K +E +VS + A + G L L + ++ ++ +L V +L+
Sbjct: 218 LLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNII-VQTSLV 276
Query: 147 DMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEV 206
DM KCG +D+AL +F++M KR+ ++Y +MI GL++HG GE A+R+F+ M+ EGL PD V
Sbjct: 277 DMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHV 336
Query: 207 AFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKS 266
+ +L ACSHSGLV EG F M ++ + P+ +H+ C+VDLL R+G L +A E ++S
Sbjct: 337 VYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQS 396
Query: 267 MH-EPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWIDV 325
+ E + W L C++ + +LG+I A +L +L N +Y+L+SN+Y+ + W DV
Sbjct: 397 IPIEKNDVIWRTFLSQCRVRQNIELGQIAAQELLKLSSHNPGDYLLISNLYSQGQMWDDV 456
Query: 326 SLVRSRMRERSVQKIPGCS 344
+ R+ + + +++ PG S
Sbjct: 457 ARTRTEIAIKGLKQTPGFS 475
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 116/250 (46%), Gaps = 15/250 (6%)
Query: 46 GYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFI 105
G+ + + AA+ +F + ++ +I GYV +AL + EM + +PD F
Sbjct: 77 GWENSMNYAAS--IFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFT 134
Query: 106 LVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQD-HVIAALLDMNAKCGNMDRALKLFKE 164
L+ A ++L + + + V K + L+ D V +L++M +CG M+ + +F++
Sbjct: 135 YPCLLKACTRLKSIREGKQIHGQVFK--LGLEADVFVQNSLINMYGRCGEMELSSAVFEK 192
Query: 165 MPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLME-GLVPDEVAFTIILTACSHSGLVDE 223
+ + S+ SM+ + G + + LF M E L +E L AC+++G ++
Sbjct: 193 LESKTAASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNL 252
Query: 224 GWN----YFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALL 279
G + +++ + I + +VD+ + G L A + + M + + + A++
Sbjct: 253 GMSIHGFLLRNISELNIIVQTS-----LVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMI 307
Query: 280 GACKLHGDSD 289
LHG+ +
Sbjct: 308 SGLALHGEGE 317
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 211 bits (537), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 126/386 (32%), Positives = 205/386 (53%), Gaps = 44/386 (11%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVV--SFT----------------- 41
+ RN+ +WN+++ + G + A G+F M + + +FT
Sbjct: 365 VSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLG 424
Query: 42 -------------------TMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNG 82
++ID Y+K+G + +A +F Q + VV W++++ G+ QNG
Sbjct: 425 KQIHGHVIRTDVSDEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNG 484
Query: 83 QPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSI-DLQQDHV 141
+A+ +F M ++ +E ++++ A S +G LE +WV + S + DL D
Sbjct: 485 NSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGLKDLFTD-- 542
Query: 142 IAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGL 201
AL+DM AKCG+++ A +F+ M R +VS+ SMI +HG A+ FN M+ G
Sbjct: 543 -TALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGT 601
Query: 202 VPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAY 261
P+EV F +L+AC HSG V+EG YF MK +G+SP+ +HFAC +DLLSRSG L +AY
Sbjct: 602 KPNEVVFMNVLSACGHSGSVEEGKYYFNLMKS-FGVSPNSEHFACFIDLLSRSGDLKEAY 660
Query: 262 ELMKSM-HEPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAE 320
+K M A WG+L+ C++H D+ + + N L ++ + Y LLSNIYA
Sbjct: 661 RTIKEMPFLADASVWGSLVNGCRIHQKMDIIKAIKNDLSDIVTDDTGYYTLLSNIYAEEG 720
Query: 321 RWIDVSLVRSRMRERSVQKIPGCSKL 346
W + +RS M+ +++K+PG S +
Sbjct: 721 EWEEFRRLRSAMKSSNLKKVPGYSAI 746
Score = 118 bits (296), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 148/279 (53%), Gaps = 12/279 (4%)
Query: 43 MIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPD 102
+++ YA+ G ++ + +++++VAW++LIS Y G QAL +F +M ++ +KPD
Sbjct: 345 LVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPD 404
Query: 103 EFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLF 162
F L S +SA G + L + + +V ++ D+ + V +L+DM +K G++D A +F
Sbjct: 405 AFTLASSISACENAGLVPLGKQIHGHVIRT--DVSDEFVQNSLIDMYSKSGSVDSASTVF 462
Query: 163 KEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVD 222
++ R +V++ SM+ G S +G +A+ LF+ M L +EV F ++ ACS G ++
Sbjct: 463 NQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLE 522
Query: 223 EG-WNYFQSMKQKYGISPSPDHF--ACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALL 279
+G W + K IS D F ++D+ ++ G L A + ++M +W +++
Sbjct: 523 KGKW-----VHHKLIISGLKDLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMI 577
Query: 280 GACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAA 318
A +HG NQ+ +E N ++ N+ +A
Sbjct: 578 NAYGMHGRIGSAISTFNQM--VESGTKPNEVVFMNVLSA 614
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 137/240 (57%), Gaps = 3/240 (1%)
Query: 41 TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVK 100
T+++ Y + G+++ A +F+ +D+VAWS L+S ++NG+ +AL++F M V+
Sbjct: 140 TSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVE 199
Query: 101 PDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALK 160
PD ++S++ ++LG L +A+ V +++ DL + + +LL M +KCG++ + +
Sbjct: 200 PDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDET-LCNSLLTMYSKCGDLLSSER 258
Query: 161 LFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGL 220
+F+++ K++ VS+ +MI + E A+R F+ M+ G+ P+ V +L++C GL
Sbjct: 259 IFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGL 318
Query: 221 VDEGWNYFQSMKQKYGISPSPDHFA-CMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALL 279
+ EG + + + P+ + + +V+L + G L D +++ + + + AW +L+
Sbjct: 319 IREGKS-VHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLI 377
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/332 (21%), Positives = 153/332 (46%), Gaps = 51/332 (15%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMP----EKNVVSFTTMIDG---------- 46
MP R++ +W+ ++ +++G++ A +F M E + V+ ++++G
Sbjct: 162 MPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIA 221
Query: 47 -------------------------YAKAGDMAAARFLFEQATEKDVVAWSALISGYVQN 81
Y+K GD+ ++ +FE+ +K+ V+W+A+IS Y +
Sbjct: 222 RSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRG 281
Query: 82 GQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHV 141
+AL+ F EM ++P+ L S++S+ +G + + V + + +D + +
Sbjct: 282 EFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESL 341
Query: 142 IAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGL 201
AL+++ A+CG + + + + R++V++ S+I + G A+ LF M+ + +
Sbjct: 342 SLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRI 401
Query: 202 VPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYG---ISPSPDHFA--CMVDLLSRSGH 256
PD ++AC ++GLV G KQ +G + D F ++D+ S+SG
Sbjct: 402 KPDAFTLASSISACENAGLVPLG-------KQIHGHVIRTDVSDEFVQNSLIDMYSKSGS 454
Query: 257 LGDAYELMKSMHEPHAGAWGALLGACKLHGDS 288
+ A + + W ++L +G+S
Sbjct: 455 VDSASTVFNQIKHRSVVTWNSMLCGFSQNGNS 486
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 116/245 (47%), Gaps = 9/245 (3%)
Query: 41 TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVK 100
T +I+ YA G ++R +FE D + LI V + A+ ++ + S+ +
Sbjct: 38 TKLIESYAFMGSPDSSRLVFEAFPYPDSFMYGVLIKCNVWCHLLDAAIDLYHRLVSETTQ 97
Query: 101 PDEFILVSLMSATS-QLGHLELAQWVDSYVSKSSIDLQQDHVI-AALLDMNAKCGNMDRA 158
+F+ S++ A + HL + V + K +D D VI +LL M + GN+ A
Sbjct: 98 ISKFVFPSVLRACAGSREHLSVGGKVHGRIIKGGVD--DDAVIETSLLCMYGQTGNLSDA 155
Query: 159 LKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHS 218
K+F MP RDLV++ +++ +G A+R+F M+ +G+ PD V ++ C+
Sbjct: 156 EKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAEL 215
Query: 219 GLVDEGWNYFQSMKQKYGISPSPDHFAC--MVDLLSRSGHLGDAYELMKSMHEPHAGAWG 276
G + + + +K D C ++ + S+ G L + + + + + +A +W
Sbjct: 216 GCLRIARSVHGQITRKM---FDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWT 272
Query: 277 ALLGA 281
A++ +
Sbjct: 273 AMISS 277
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 211 bits (536), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 107/305 (35%), Positives = 172/305 (56%), Gaps = 1/305 (0%)
Query: 41 TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVK 100
T+I Y+K D+ A +F Q E + W+++ISGY Q + +A + EM +
Sbjct: 319 NTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQ 378
Query: 101 PDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALK 160
P+ L S++ +++ +L+ + Y+ + + +L+D+ AK G + A +
Sbjct: 379 PNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQ 438
Query: 161 LFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGL 220
+ M KRD V+Y S+I G G G A+ LF M G+ PD V +L+ACSHS L
Sbjct: 439 VSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDHVTVVAVLSACSHSKL 498
Query: 221 VDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSM-HEPHAGAWGALL 279
V EG F M+ +YGI P HF+CMVDL R+G L A +++ +M ++P W LL
Sbjct: 499 VHEGERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIHNMPYKPSGATWATLL 558
Query: 280 GACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQK 339
AC +HG++ +G+ A +L E++P+N Y+L++N+YAAA W ++ VR+ MR+ V+K
Sbjct: 559 NACHIHGNTQIGKWAAEKLLEMKPENPGYYVLIANMYAAAGSWSKLAEVRTIMRDLGVKK 618
Query: 340 IPGCS 344
PGC+
Sbjct: 619 DPGCA 623
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 119/252 (47%), Gaps = 5/252 (1%)
Query: 10 NAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQ----ATE 65
NA++ + + ++ AR +FD M E++ VS+ +I+ YA G + A LF++ E
Sbjct: 183 NALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVE 242
Query: 66 KDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWV 125
V+ W+ + G +Q G AL + M + D ++ + A S +G + L + +
Sbjct: 243 VSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEI 302
Query: 126 DSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGC 185
SS D D+V L+ M +KC ++ AL +F++ + L ++ S+I G +
Sbjct: 303 HGLAIHSSYD-GIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNK 361
Query: 186 GEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFA 245
E+A L ML+ G P+ + IL C+ + G + + ++ +
Sbjct: 362 SEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWN 421
Query: 246 CMVDLLSRSGHL 257
+VD+ ++SG +
Sbjct: 422 SLVDVYAKSGKI 433
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 76/164 (46%), Gaps = 1/164 (0%)
Query: 56 ARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQ 115
A+ + E + + W+ LI+ Y +N + + + M SK ++PD F S++ A +
Sbjct: 97 AQSIIENSDILHPLPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGE 156
Query: 116 LGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCS 175
+ + V + SS +V AL+ M + NM A +LF M +RD VS+ +
Sbjct: 157 TLDVAFGRVVHGSIEVSSYK-SSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNA 215
Query: 176 MIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSG 219
+I + G +A LF+ M G+ + + II C +G
Sbjct: 216 VINCYASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTG 259
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 78/152 (51%), Gaps = 13/152 (8%)
Query: 40 FTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNV 99
+ +++D YAK+G + AA+ + + +++D V +++LI GY G+ AL +F EM +
Sbjct: 420 WNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGI 479
Query: 100 KPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSID------LQQDHVIAALLDMNAKCG 153
KPD +V+++SA S H +L + K + LQ + ++D+ + G
Sbjct: 480 KPDHVTVVAVLSACS---HSKLVHEGERLFMKMQCEYGIRPCLQH---FSCMVDLYGRAG 533
Query: 154 NMDRALKLFKEMP-KRDLVSYCSMIQGLSIHG 184
+ +A + MP K ++ +++ IHG
Sbjct: 534 FLAKAKDIIHNMPYKPSGATWATLLNACHIHG 565
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 211 bits (536), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 107/308 (34%), Positives = 193/308 (62%), Gaps = 8/308 (2%)
Query: 41 TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVK 100
TT++D Y+K GD+ +A LF++ +DV +W+ALI+G V + ++A++++ ME++ ++
Sbjct: 148 TTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIR 207
Query: 101 PDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALK 160
E +V+ + A S LG ++ + + S ++ + A +DM +KCG +D+A +
Sbjct: 208 RSEVTVVAALGACSHLGDVKEGENIFHGYSNDNVIVSN-----AAIDMYSKCGFVDKAYQ 262
Query: 161 LFKEMP-KRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSG 219
+F++ K+ +V++ +MI G ++HG A+ +F+ + G+ PD+V++ LTAC H+G
Sbjct: 263 VFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHAG 322
Query: 220 LVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHE-PHAGAWGAL 278
LV+ G + F +M K G+ + H+ C+VDLLSR+G L +A++++ SM P W +L
Sbjct: 323 LVEYGLSVFNNMACK-GVERNMKHYGCVVDLLSRAGRLREAHDIICSMSMIPDPVLWQSL 381
Query: 279 LGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQ 338
LGA +++ D ++ EI + ++ E+ N +++LLSN+YAA RW DV VR M + V+
Sbjct: 382 LGASEIYSDVEMAEIASREIKEMGVNNDGDFVLLSNVYAAQGRWKDVGRVRDDMESKQVK 441
Query: 339 KIPGCSKL 346
KIPG S +
Sbjct: 442 KIPGLSYI 449
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 108/250 (43%), Gaps = 23/250 (9%)
Query: 51 GDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLM 110
GD++ A +F + W+A+I G+ + P+ A + M ++ V +
Sbjct: 51 GDLSFAVQIFRYIPKPLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDAL 110
Query: 111 SATSQLGHLELAQWVDSYVSKSSID----------LQQDHVI-AALLDMNAKCGNMDRAL 159
+ + L A + S++D L D ++ LLD +K G++ A
Sbjct: 111 TCSFTLKACARA------LCSSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAY 164
Query: 160 KLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSG 219
KLF EMP RD+ S+ ++I GL +A+ L+ M EG+ EV L ACSH G
Sbjct: 165 KLFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLG 224
Query: 220 LVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMH-EPHAGAWGAL 278
V EG N F I + +D+ S+ G + AY++ + + W +
Sbjct: 225 DVKEGENIFHGYSNDNVIVSNA-----AIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTM 279
Query: 279 LGACKLHGDS 288
+ +HG++
Sbjct: 280 ITGFAVHGEA 289
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 90/201 (44%), Gaps = 37/201 (18%)
Query: 1 MPQRNVASWNAMLCGFVKD-----------------------------------GDLSSA 25
MP R+VASWNA++ G V GD+
Sbjct: 170 MPVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEG 229
Query: 26 RGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQAT-EKDVVAWSALISGYVQNGQP 84
+F NV+ ID Y+K G + A +FEQ T +K VV W+ +I+G+ +G+
Sbjct: 230 ENIFHGYSNDNVIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEA 289
Query: 85 NQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAA 144
++AL++F ++E +KPD+ ++ ++A G +E V + ++ ++ H
Sbjct: 290 HRALEIFDKLEDNGIKPDDVSYLAALTACRHAGLVEYGLSVFNNMACKGVERNMKHY-GC 348
Query: 145 LLDMNAKCGNMDRALKLFKEM 165
++D+ ++ G + A + M
Sbjct: 349 VVDLLSRAGRLREAHDIICSM 369
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 210 bits (535), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 109/345 (31%), Positives = 190/345 (55%), Gaps = 12/345 (3%)
Query: 10 NAMLCGFVKDGDLSSARGVFDAMPEK----NVVSFTTMIDGYAKAGDMAAARFLFEQATE 65
++L F GD+ + R + + ++V +ID Y K+ + A +FE E
Sbjct: 266 TSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMDE 325
Query: 66 KDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWV 125
+D+ W++++ + G + L +F M ++PD L +++ +L L + +
Sbjct: 326 RDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREI 385
Query: 126 DSYVSKSSI---DLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSI 182
Y+ S + + + +L+DM KCG++ A +F M +D S+ MI G +
Sbjct: 386 HGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMRVKDSASWNIMINGYGV 445
Query: 183 HGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPD 242
CGE A+ +F+ M G+ PDE+ F +L ACSHSG ++EG N+ M+ Y I P+ D
Sbjct: 446 QSCGELALDMFSCMCRAGVKPDEITFVGLLQACSHSGFLNEGRNFLAQMETVYNILPTSD 505
Query: 243 HFACMVDLLSRSGHLGDAYELMKSMHEP---HAGAWGALLGACKLHGDSDLGEIVANQLF 299
H+AC++D+L R+ L +AYEL ++ +P + W ++L +C+LHG+ DL + +L
Sbjct: 506 HYACVIDMLGRADKLEEAYEL--AISKPICDNPVVWRSILSSCRLHGNKDLALVAGKRLH 563
Query: 300 ELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQKIPGCS 344
ELEP++ Y+L+SN+Y A ++ +V VR MR+++V+K PGCS
Sbjct: 564 ELEPEHCGGYVLMSNVYVEAGKYEEVLDVRDAMRQQNVKKTPGCS 608
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 143/298 (47%), Gaps = 14/298 (4%)
Query: 2 PQR----NVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVV-----SFTTMIDGYAKAGD 52
P+R NVA+ A L + D S + + M K + + T++++ YAK G
Sbjct: 52 PKRYEHHNVATCIATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGL 111
Query: 53 MAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSA 112
M A +F +E+DV ++ALISG+V NG P A++ + EM + + PD++ SL+
Sbjct: 112 MRRAVLVF-GGSERDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKG 170
Query: 113 TSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKR-DLV 171
+ + L + V K D +V + L+ +K +++ A K+F E+P R D V
Sbjct: 171 SDAM-ELSDVKKVHGLAFKLGFD-SDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSV 228
Query: 172 SYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSM 231
+ +++ G S EDA+ +F+ M EG+ T +L+A + SG +D G + +
Sbjct: 229 LWNALVNGYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRS-IHGL 287
Query: 232 KQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHGDSD 289
K G ++D+ +S L +A + ++M E W ++L GD D
Sbjct: 288 AVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHD 345
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 210 bits (534), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 107/312 (34%), Positives = 186/312 (59%), Gaps = 6/312 (1%)
Query: 41 TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVK 100
T ++ Y + + AR +F++ + DVV W L++GYV+ G ++ L+VF EM + ++
Sbjct: 156 TGVLRIYVEDKLLFDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIE 215
Query: 101 PDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALK 160
PDEF + + ++A +Q+G L +W+ +V K V AL+DM AKCG ++ A++
Sbjct: 216 PDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVE 275
Query: 161 LFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLME-GLVPDEVAFTIILTACSHSG 219
+F+++ +R++ S+ ++I G + +G + A + + E G+ PD V +L AC+H G
Sbjct: 276 VFEKLTRRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGG 335
Query: 220 LVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSM-HEPHAGAWGAL 278
++EG ++M+ +YGI+P +H++C+VDL+ R+G L DA +L++ M +P A WGAL
Sbjct: 336 FLEEGRTMLENMEARYGITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGAL 395
Query: 279 LGACKLHGDSDLGEIVANQLFELEPQNA----ANYILLSNIYAAAERWIDVSLVRSRMRE 334
L C+ H + +LGE+ L +LE N A + LSNIY + +R + VR + +
Sbjct: 396 LNGCRTHKNVELGELAVQNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEAFKVRGMIEQ 455
Query: 335 RSVQKIPGCSKL 346
R ++K PG S L
Sbjct: 456 RGIRKTPGWSLL 467
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 110/231 (47%), Gaps = 3/231 (1%)
Query: 59 LFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEM---ESKNVKPDEFILVSLMSATSQ 115
+F+ + + +I ++ QP+ L+ FL M E +++ P L+ A +
Sbjct: 69 IFDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIVACLK 128
Query: 116 LGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCS 175
+ + + +V K+ + L HV +L + + + A K+F E+P+ D+V +
Sbjct: 129 ACFFSVGKQIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQPDVVKWDV 188
Query: 176 MIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKY 235
++ G G G + + +F ML+ G+ PDE + T LTAC+ G + +G + +K+K
Sbjct: 189 LMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKR 248
Query: 236 GISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHG 286
I +VD+ ++ G + A E+ + + + +W AL+G +G
Sbjct: 249 WIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYG 299
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 131/288 (45%), Gaps = 50/288 (17%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAM---------------------------- 32
+PQ +V W+ ++ G+V+ G S VF M
Sbjct: 178 IPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQG 237
Query: 33 ------------PEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQ 80
E +V T ++D YAK G + A +FE+ T ++V +W+ALI GY
Sbjct: 238 KWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAA 297
Query: 81 NGQPNQALKVFLEMESKN-VKPDEFILVSLMSATSQLGHLELAQ-WVDSYVSKSSIDLQQ 138
G +A +E ++ +KPD +L+ +++A + G LE + +++ ++ I +
Sbjct: 298 YGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEARYGITPKH 357
Query: 139 DHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVS-YCSMIQGLSIHG---CGEDAVRLFN 194
+H + ++D+ + G +D AL L ++MP + L S + +++ G H GE AV+ N
Sbjct: 358 EHY-SCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVQ--N 414
Query: 195 SMLME-GLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSP 241
+ +E G V +E A + L+ S + + M ++ GI +P
Sbjct: 415 LLDLEKGNVEEEEAALVQLSNIYFSVQRNPEAFKVRGMIEQRGIRKTP 462
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 209 bits (532), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 112/317 (35%), Positives = 194/317 (61%), Gaps = 14/317 (4%)
Query: 43 MIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPD 102
+I Y G + AR +F++ E+ +V+W+++I V+ G+ + AL++F EM+ ++ +PD
Sbjct: 192 LIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQ-RSFEPD 250
Query: 103 EFILVSLMSATSQLGHLELAQWVDSYV-SKSSIDLQQDHVIA-ALLDMNAKCGNMDRALK 160
+ + S++SA + LG L L W +++ K +D+ D ++ +L++M KCG++ A +
Sbjct: 251 GYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQ 310
Query: 161 LFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSML--MEGLVPDEVAFTIILTACSHS 218
+F+ M KRDL S+ +MI G + HG E+A+ F+ M+ E + P+ V F +L AC+H
Sbjct: 311 VFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHR 370
Query: 219 GLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSM-HEPHAGAWGA 277
G V++G YF M + Y I P+ +H+ C+VDL++R+G++ +A +++ SM +P A W +
Sbjct: 371 GFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRS 430
Query: 278 LLGACKLHGDS-DLGEIVANQLFELEPQNAAN-------YILLSNIYAAAERWIDVSLVR 329
LL AC G S +L E +A + + N ++ Y+LLS +YA+A RW DV +VR
Sbjct: 431 LLDACCKKGASVELSEEIARNIIGTKEDNESSNGNCSGAYVLLSRVYASASRWNDVGIVR 490
Query: 330 SRMRERSVQKIPGCSKL 346
M E ++K PGCS +
Sbjct: 491 KLMSEHGIRKEPGCSSI 507
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 98/229 (42%), Gaps = 46/229 (20%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEK------------------------- 35
MP+R++ SWN+M+ V+ G+ SA +F M
Sbjct: 212 MPERSLVSWNSMIDALVRFGEYDSALQLFREMQRSFEPDGYTMQSVLSACAGLGSLSLGT 271
Query: 36 ----------------NVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYV 79
+V+ ++I+ Y K G + A +F+ ++D+ +W+A+I G+
Sbjct: 272 WAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFA 331
Query: 80 QNGQPNQALKVFLEMESK--NVKPDEFILVSLMSATSQLGHLELA-QWVDSYVSKSSIDL 136
+G+ +A+ F M K NV+P+ V L+ A + G + Q+ D V I+
Sbjct: 332 THGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEP 391
Query: 137 QQDHVIAALLDMNAKCGNMDRALKLFKEMP-KRDLVSYCSMIQGLSIHG 184
+H ++D+ A+ G + A+ + MP K D V + S++ G
Sbjct: 392 ALEHY-GCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKG 439
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 104/242 (42%), Gaps = 6/242 (2%)
Query: 52 DMAAARFLFEQATEKDVVAWSALISGYVQN-GQPNQALKVFLEM-ESKNVKPDEFILVSL 109
D+ A +F+ W+ LI + + +A ++ +M E PD+ +
Sbjct: 98 DVNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFV 157
Query: 110 MSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRD 169
+ A + + + V + K +V L+ + CG +D A K+F EMP+R
Sbjct: 158 LKACAYIFGFSEGKQVHCQIVKHGFG-GDVYVNNGLIHLYGSCGCLDLARKVFDEMPERS 216
Query: 170 LVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQ 229
LVS+ SMI L G + A++LF M PD +L+AC+ G + G
Sbjct: 217 LVSWNSMIDALVRFGEYDSALQLFREM-QRSFEPDGYTMQSVLSACAGLGSLSLGTWAHA 275
Query: 230 SMKQKYGISPSPDHFA--CMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHGD 287
+ +K + + D ++++ + G L A ++ + M + +W A++ HG
Sbjct: 276 FLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGR 335
Query: 288 SD 289
++
Sbjct: 336 AE 337
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 209 bits (531), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 114/317 (35%), Positives = 189/317 (59%), Gaps = 11/317 (3%)
Query: 34 EKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLE 93
E+ +F TM Y + G+++ +R LFE + +DVV WS++ISGY + G ++ + + +
Sbjct: 287 ERLTAAFMTM---YCRCGNVSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQ 343
Query: 94 MESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIA--ALLDMNAK 151
M + ++ + L++++SA + L A V S + K H++ AL+DM AK
Sbjct: 344 MRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQILKCGF---MSHILLGNALIDMYAK 400
Query: 152 CGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTII 211
CG++ A ++F E+ ++DLVS+ SMI +HG G +A+ +F M+ G D++AF I
Sbjct: 401 CGSLSAAREVFYELTEKDLVSWSSMINAYGLHGHGSEALEIFKGMIKGGHEVDDMAFLAI 460
Query: 212 LTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSM-HEP 270
L+AC+H+GLV+E F + KY + + +H+AC ++LL R G + DA+E+ +M +P
Sbjct: 461 LSACNHAGLVEEAQTIF-TQAGKYHMPVTLEHYACYINLLGRFGKIDDAFEVTINMPMKP 519
Query: 271 HAGAWGALLGACKLHGDSDL-GEIVANQLFELEPQNAANYILLSNIYAAAERWIDVSLVR 329
A W +LL AC+ HG D+ G+I+AN+L + EP N ANY+LLS I+ + + VR
Sbjct: 520 SARIWSSLLSACETHGRLDVAGKIIANELMKSEPDNPANYVLLSKIHTESGNYHAAEEVR 579
Query: 330 SRMRERSVQKIPGCSKL 346
M+ R + K G SK+
Sbjct: 580 RVMQRRKLNKCYGFSKI 596
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 131/260 (50%), Gaps = 3/260 (1%)
Query: 28 VFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQA 87
+ D +++V+ T ++D Y K D AAA +F+Q K+ V+W+A+ISG V N
Sbjct: 176 LVDERMQESVLLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMG 235
Query: 88 LKVFLEMESKNVKPDEFILVSLMSATSQLGH-LELAQWVDSYVSKSSIDLQQDHVIAALL 146
+ +F M+ +N++P+ L+S++ A +L + L + + + + + + AA +
Sbjct: 236 VDLFRAMQRENLRPNRVTLLSVLPACVELNYGSSLVKEIHGFSFRHGCH-ADERLTAAFM 294
Query: 147 DMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEV 206
M +CGN+ + LF+ RD+V + SMI G + G + + L N M EG+ + V
Sbjct: 295 TMYCRCGNVSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSV 354
Query: 207 AFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKS 266
I++AC++S L+ + S K G ++D+ ++ G L A E+
Sbjct: 355 TLLAIVSACTNSTLLSFA-STVHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYE 413
Query: 267 MHEPHAGAWGALLGACKLHG 286
+ E +W +++ A LHG
Sbjct: 414 LTEKDLVSWSSMINAYGLHG 433
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 120/261 (45%), Gaps = 17/261 (6%)
Query: 36 NVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEME 95
+ V ++I YAK A R +F++ +D V++ ++I+ Q+G +A+K+ EM
Sbjct: 81 DTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDGLLYEAMKLIKEMY 140
Query: 96 SKNVKPDEFILVSLMSATSQLG-HLELAQWVDSYVSKSSIDLQQDHVI--AALLDMNAKC 152
P ++ SL++ +++G ++A+ + V + Q+ V+ AL+DM K
Sbjct: 141 FYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVD--ERMQESVLLSTALVDMYLKF 198
Query: 153 GNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIIL 212
+ A +F +M ++ VS+ +MI G + E V LF +M E L P+ V +L
Sbjct: 199 DDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVL 258
Query: 213 TACSH----SGLVDE--GWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKS 266
AC S LV E G+++ ++G A + + R G++ + L ++
Sbjct: 259 PACVELNYGSSLVKEIHGFSF------RHGCHADERLTAAFMTMYCRCGNVSLSRVLFET 312
Query: 267 MHEPHAGAWGALLGACKLHGD 287
W +++ GD
Sbjct: 313 SKVRDVVMWSSMISGYAETGD 333
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 83/201 (41%), Gaps = 19/201 (9%)
Query: 139 DHVIA-ALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSML 197
D V++ +L+ M AK K+F EM RD VSYCS+I G +A++L M
Sbjct: 81 DTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDGLLYEAMKLIKEMY 140
Query: 198 MEGLVPDEVAFTIILTACSHSGLVDEGWNYFQS-------MKQKYGISPSPDHFACMVDL 250
G +P +L C+ G + F + M++ +S + +VD+
Sbjct: 141 FYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTA------LVDM 194
Query: 251 LSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHGDSDLGE--IVANQLFELEPQNAAN 308
+ A+ + M + +W A++ C + + ++G A Q L P
Sbjct: 195 YLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVT- 253
Query: 309 YILLSNIYAAAERWIDVSLVR 329
LLS + A E SLV+
Sbjct: 254 --LLSVLPACVELNYGSSLVK 272
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 208 bits (530), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 120/384 (31%), Positives = 195/384 (50%), Gaps = 41/384 (10%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVF----------DAMPEKNVVSFTT-------- 42
M ++ SWN+++ G+++ GDL A +F D + ++S +T
Sbjct: 368 MECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFG 427
Query: 43 ---------------------MIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQN 81
+ID YAK G++ + +F D V W+ +IS V+
Sbjct: 428 KGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRF 487
Query: 82 GQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHV 141
G L+V +M V PD + + + L L + + + + + + +
Sbjct: 488 GDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYE-SELQI 546
Query: 142 IAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGL 201
AL++M +KCG ++ + ++F+ M +RD+V++ MI ++G GE A+ F M G+
Sbjct: 547 GNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGI 606
Query: 202 VPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAY 261
VPD V F I+ ACSHSGLVDEG F+ MK Y I P +H+AC+VDLLSRS + A
Sbjct: 607 VPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAE 666
Query: 262 ELMKSMH-EPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAE 320
E +++M +P A W ++L AC+ GD + E V+ ++ EL P + IL SN YAA
Sbjct: 667 EFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALR 726
Query: 321 RWIDVSLVRSRMRERSVQKIPGCS 344
+W VSL+R ++++ + K PG S
Sbjct: 727 KWDKVSLIRKSLKDKHITKNPGYS 750
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 148/312 (47%), Gaps = 13/312 (4%)
Query: 14 CGFVKDGDLSSARGVFDAMPEKNVVSFTT----MIDGYAKAGDMAAARFLFEQATEKDVV 69
CG ++D LS A+ +++ M + V +T +ID YAK GDM AR +F KD V
Sbjct: 317 CGHLRD--LSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTV 374
Query: 70 AWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYV 129
+W+++ISGY+Q+G +A+K+F M + D + L+S +++L L+ + + S
Sbjct: 375 SWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNG 434
Query: 130 SKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDA 189
KS I + V AL+DM AKCG + +LK+F M D V++ ++I G
Sbjct: 435 IKSGICIDLS-VSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATG 493
Query: 190 VRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVD 249
+++ M +VPD F + L C+ G ++G +++
Sbjct: 494 LQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLG-KEIHCCLLRFGYESELQIGNALIE 552
Query: 250 LLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAA-- 307
+ S+ G L ++ + + M W ++ A ++G+ GE ++E
Sbjct: 553 MYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGE---GEKALETFADMEKSGIVPD 609
Query: 308 NYILLSNIYAAA 319
+ + ++ IYA +
Sbjct: 610 SVVFIAIIYACS 621
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 147/328 (44%), Gaps = 48/328 (14%)
Query: 2 PQRNVASWNAMLCGFVKDGDLSSA--------------------------RGVFDAMP-- 33
P +NV WN+++ F K+G A G+FDA
Sbjct: 67 PAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGD 126
Query: 34 -----------EKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNG 82
E ++ ++D Y++ G + AR +F++ +D+V+W++LISGY +G
Sbjct: 127 LVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHG 186
Query: 83 QPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVI 142
+AL+++ E+++ + PD F + S++ A L ++ Q + + KS + V
Sbjct: 187 YYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGV-NSVVVVN 245
Query: 143 AALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLV 202
L+ M K A ++F EM RD VSY +MI G E++VR+F L +
Sbjct: 246 NGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENL-DQFK 304
Query: 203 PDEVAFTIILTACSH---SGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGD 259
PD + + +L AC H L +NY +K + + + + ++D+ ++ G +
Sbjct: 305 PDLLTVSSVLRACGHLRDLSLAKYIYNYM--LKAGFVLESTVRNI--LIDVYAKCGDMIT 360
Query: 260 AYELMKSMHEPHAGAWGALLGACKLHGD 287
A ++ SM +W +++ GD
Sbjct: 361 ARDVFNSMECKDTVSWNSIISGYIQSGD 388
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 102/184 (55%), Gaps = 4/184 (2%)
Query: 43 MIDGYAKAGDMAAARFLFEQATE-KDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKP 101
+ID Y+ + A++ +F + + K+V W+++I + +NG +AL+ + ++ V P
Sbjct: 45 LIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSP 104
Query: 102 DEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIA-ALLDMNAKCGNMDRALK 160
D++ S++ A + L E+ V Y + + D + AL+DM ++ G + RA +
Sbjct: 105 DKYTFPSVIKACAGLFDAEMGDLV--YEQILDMGFESDLFVGNALVDMYSRMGLLTRARQ 162
Query: 161 LFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGL 220
+F EMP RDLVS+ S+I G S HG E+A+ +++ + +VPD + +L A + +
Sbjct: 163 VFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLV 222
Query: 221 VDEG 224
V +G
Sbjct: 223 VKQG 226
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 207 bits (528), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 113/306 (36%), Positives = 182/306 (59%), Gaps = 3/306 (0%)
Query: 43 MIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEME-SKNVKP 101
+I Y+K D+ FLFEQ E +++W+++ISG VQ+G+ + A +VF +M + + P
Sbjct: 388 LITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLP 447
Query: 102 DEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKL 161
D + SL++ SQL L L + + Y +++ + ++ V AL+DM AKCGN +A +
Sbjct: 448 DAITIASLLAGCSQLCCLNLGKELHGYTLRNNFE-NENFVCTALIDMYAKCGNEVQAESV 506
Query: 162 FKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLV 221
FK + ++ SMI G S+ G A+ + M +GL PDE+ F +L+AC+H G V
Sbjct: 507 FKSIKAPCTATWNSMISGYSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSACNHGGFV 566
Query: 222 DEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMH-EPHAGAWGALLG 280
DEG F++M +++GISP+ H+A MV LL R+ +A L+ M +P + WGALL
Sbjct: 567 DEGKICFRAMIKEFGISPTLQHYALMVGLLGRACLFTEALYLIWKMDIKPDSAVWGALLS 626
Query: 281 ACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQKI 340
AC +H + ++GE VA ++F L+ +N Y+L+SN+YA W DV VR+ M++
Sbjct: 627 ACIIHRELEVGEYVARKMFMLDYKNGGLYVLMSNLYATEAMWDDVVRVRNMMKDNGYDGY 686
Query: 341 PGCSKL 346
G S++
Sbjct: 687 LGVSQI 692
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 121/262 (46%), Gaps = 10/262 (3%)
Query: 41 TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVK 100
T++++ Y K G + +A+ LF++ E+D V W+ALI GY +NG A K+F+ M +
Sbjct: 89 TSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFS 148
Query: 101 PDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALK 160
P LV+L+ Q G + + V +KS ++L V AL+ +KC + A
Sbjct: 149 PSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLEL-DSQVKNALISFYSKCAELGSAEV 207
Query: 161 LFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTA-CSHSG 219
LF+EM + VS+ +MI S G E+A+ +F +M + + V +L+A SH
Sbjct: 208 LFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSAHVSHEP 267
Query: 220 LVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALL 279
L + K G+ +V SR G L A L S + +++
Sbjct: 268 L--------HCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIV 319
Query: 280 GACKLHGDSDLGEIVANQLFEL 301
GD D+ + ++ +L
Sbjct: 320 SCYAEKGDMDIAVVYFSKTRQL 341
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/326 (22%), Positives = 144/326 (44%), Gaps = 48/326 (14%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNV--------------VS------- 39
M ++ SWN M+ + + G A VF M EKNV VS
Sbjct: 212 MKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSAHVSHEPLHCL 271
Query: 40 ------------FTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQA 87
T+++ Y++ G + +A L+ A + +V ++++S Y + G + A
Sbjct: 272 VVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIA 331
Query: 88 LKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLD 147
+ F + +K D LV ++ + H+++ + Y KS + + V+ L+
Sbjct: 332 VVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGL-CTKTLVVNGLIT 390
Query: 148 MNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLME-GLVPDEV 206
M +K +++ L LF+++ + L+S+ S+I G G A +F+ M++ GL+PD +
Sbjct: 391 MYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAI 450
Query: 207 AFTIILTACSHSGLVDEGWNYFQSMKQKYGISP----SPDHFAC--MVDLLSRSGHLGDA 260
+L CS ++ G K+ +G + ++F C ++D+ ++ G+ A
Sbjct: 451 TIASLLAGCSQLCCLNLG-------KELHGYTLRNNFENENFVCTALIDMYAKCGNEVQA 503
Query: 261 YELMKSMHEPHAGAWGALLGACKLHG 286
+ KS+ P W +++ L G
Sbjct: 504 ESVFKSIKAPCTATWNSMISGYSLSG 529
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 111/237 (46%), Gaps = 4/237 (1%)
Query: 66 KDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFIL-VSLMSATSQLGHLEL-AQ 123
+D+ + +L+ + + + +F ++ ++ P+ F + + L + T+ +L +
Sbjct: 11 RDLSYFHSLLKSCIHGEISSSPITIFRDLLRSSLTPNHFTMSIFLQATTTSFNSFKLQVE 70
Query: 124 WVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIH 183
V ++++KS +D + +V +LL++ K G + A LF EMP+RD V + ++I G S +
Sbjct: 71 QVQTHLTKSGLD-RFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRN 129
Query: 184 GCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDH 243
G DA +LF ML +G P +L C G V +G + + K G+
Sbjct: 130 GYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRS-VHGVAAKSGLELDSQV 188
Query: 244 FACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHGDSDLGEIVANQLFE 300
++ S+ LG A L + M + +W ++GA G + V +FE
Sbjct: 189 KNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFE 245
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 46/80 (57%)
Query: 41 TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVK 100
T +ID YAK G+ A +F+ W+++ISGY +G ++AL +LEM K +K
Sbjct: 488 TALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSGLQHRALSCYLEMREKGLK 547
Query: 101 PDEFILVSLMSATSQLGHLE 120
PDE + ++SA + G ++
Sbjct: 548 PDEITFLGVLSACNHGGFVD 567
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 207 bits (527), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 109/312 (34%), Positives = 185/312 (59%), Gaps = 6/312 (1%)
Query: 37 VVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMES 96
V + +I+ K G+ A+ + A++++V+ W+ +I GYV+N Q +ALK M S
Sbjct: 98 VCNINLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLS 157
Query: 97 -KNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNM 155
++KP++F S ++A ++LG L A+WV S + S I+L + +AL+D+ AKCG++
Sbjct: 158 FTDIKPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAI-LSSALVDVYAKCGDI 216
Query: 156 DRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTAC 215
+ ++F + + D+ + +MI G + HG +A+R+F+ M E + PD + F +LT C
Sbjct: 217 GTSREVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTC 276
Query: 216 SHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMH-EPHAGA 274
SH GL++EG YF M +++ I P +H+ MVDLL R+G + +AYEL++SM EP
Sbjct: 277 SHCGLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVI 336
Query: 275 WGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRE 334
W +LL + + + + +LGEI L + +Y+LLSNIY++ ++W VR M +
Sbjct: 337 WRSLLSSSRTYKNPELGEIAIQN---LSKAKSGDYVLLSNIYSSTKKWESAQKVRELMSK 393
Query: 335 RSVQKIPGCSKL 346
++K G S L
Sbjct: 394 EGIRKAKGKSWL 405
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 97/179 (54%), Gaps = 7/179 (3%)
Query: 5 NVASWNAMLCGFVKDGDLSSARGV----FDAMPEKNVVSFTTMIDGYAKAGDMAAARFLF 60
N S+ + L + GDL A+ V D+ E N + + ++D YAK GD+ +R +F
Sbjct: 164 NKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVF 223
Query: 61 EQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLE 120
DV W+A+I+G+ +G +A++VF EME+++V PD + L++ S G LE
Sbjct: 224 YSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLE 283
Query: 121 LAQWVDSYVSKS-SIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMP-KRDLVSYCSMI 177
+ +S+ SI + +H A++D+ + G + A +L + MP + D+V + S++
Sbjct: 284 EGKEYFGLMSRRFSIQPKLEHY-GAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLL 341
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 207 bits (527), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 107/310 (34%), Positives = 181/310 (58%), Gaps = 3/310 (0%)
Query: 36 NVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEME 95
++ + + +ID Y+ + +R +F++ KD+V W+++ +GYVQ + +AL +FLE++
Sbjct: 488 DIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQ 547
Query: 96 SKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNM 155
+PDEF ++++A L ++L Q + K ++ ++ ALLDM AKCG+
Sbjct: 548 LSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNP-YITNALLDMYAKCGSP 606
Query: 156 DRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTAC 215
+ A K F RD+V + S+I + HG G+ A+++ M+ EG+ P+ + F +L+AC
Sbjct: 607 EDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSAC 666
Query: 216 SHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSM-HEPHAGA 274
SH+GLV++G F+ M ++GI P +H+ CMV LL R+G L A EL++ M +P A
Sbjct: 667 SHAGLVEDGLKQFELM-LRFGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIV 725
Query: 275 WGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRE 334
W +LL C G+ +L E A +P+++ ++ +LSNIYA+ W + VR RM+
Sbjct: 726 WRSLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERMKV 785
Query: 335 RSVQKIPGCS 344
V K PG S
Sbjct: 786 EGVVKEPGRS 795
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 109/183 (59%), Gaps = 1/183 (0%)
Query: 34 EKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLE 93
+++V T +ID Y K G++ AR +F+ EK V W+ +ISG V+ G+ +L++F +
Sbjct: 180 DRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQ 239
Query: 94 MESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCG 153
+ NV PD +IL +++SA S L LE + + +++ + +++ ++ L+D KCG
Sbjct: 240 LMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDAS-LMNVLIDSYVKCG 298
Query: 154 NMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILT 213
+ A KLF MP ++++S+ +++ G + ++A+ LF SM GL PD A + ILT
Sbjct: 299 RVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILT 358
Query: 214 ACS 216
+C+
Sbjct: 359 SCA 361
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 128/245 (52%), Gaps = 7/245 (2%)
Query: 43 MIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEM-ESKNVKP 101
+I+ Y++AG M AR +FE+ E+++V+WS ++S +G ++L VFLE ++ P
Sbjct: 85 LINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSP 144
Query: 102 DEFILVSLMSATSQL---GHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRA 158
+E+IL S + A S L G + Q + S++ KS D + +V L+D K GN+D A
Sbjct: 145 NEYILSSFIQACSGLDGRGRWMVFQ-LQSFLVKSGFD-RDVYVGTLLIDFYLKDGNIDYA 202
Query: 159 LKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHS 218
+F +P++ V++ +MI G G +++LF ++ + +VPD + +L+ACS
Sbjct: 203 RLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSIL 262
Query: 219 GLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGAL 278
+ EG + +YG+ ++D + G + A++L M + +W L
Sbjct: 263 PFL-EGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTL 321
Query: 279 LGACK 283
L K
Sbjct: 322 LSGYK 326
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/324 (23%), Positives = 136/324 (41%), Gaps = 46/324 (14%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVS--------------------- 39
+P+++ +W M+ G VK G + +F + E NVV
Sbjct: 209 LPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGG 268
Query: 40 ------------------FTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQN 81
+ID Y K G + AA LF K++++W+ L+SGY QN
Sbjct: 269 KQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQN 328
Query: 82 GQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHV 141
+A+++F M +KPD + S++++ + L L V +Y K+++ +V
Sbjct: 329 ALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLG-NDSYV 387
Query: 142 IAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCG---EDAVRLFNSMLM 198
+L+DM AKC + A K+F D+V + +MI+G S G +A+ +F M
Sbjct: 388 TNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRF 447
Query: 199 EGLVPDEVAFTIILTACSHSGLVDEGWN-YFQSMKQKYGISPSPDHFACMVDLLSRSGHL 257
+ P + F +L A + L G + + KYG++ + ++D+ S L
Sbjct: 448 RLIRPSLLTFVSLLRA--SASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCL 505
Query: 258 GDAYELMKSMHEPHAGAWGALLGA 281
D+ + M W ++
Sbjct: 506 KDSRLVFDEMKVKDLVIWNSMFAG 529
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 207 bits (527), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 108/320 (33%), Positives = 185/320 (57%), Gaps = 16/320 (5%)
Query: 41 TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQ-----NGQPNQALKVFLEME 95
TT++ YAK GD+ AR +F++ E+ V W+A+I GY N +A+ +F
Sbjct: 151 TTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYCSHKDKGNHNARKAMVLFRRFS 210
Query: 96 --SKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVI-AALLDMNAKC 152
V+P + +V ++SA SQ G LE+ V Y+ K + D I AL+DM +KC
Sbjct: 211 CCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMYSKC 270
Query: 153 GNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIIL 212
G ++ A +F+ M +++ ++ SM GL+++G G + L N M G+ P+E+ FT +L
Sbjct: 271 GCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETPNLLNRMAESGIKPNEITFTSLL 330
Query: 213 TACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMH-EPH 271
+A H GLV+EG F+SMK ++G++P +H+ C+VDLL ++G + +AY+ + +M +P
Sbjct: 331 SAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIVDLLGKAGRIQEAYQFILAMPIKPD 390
Query: 272 AGAWGALLGACKLHGDSDLGEIVANQLFELEPQN-------AANYILLSNIYAAAERWID 324
A +L AC ++G++ +GE + L E+E ++ +Y+ LSN+ A +W++
Sbjct: 391 AILLRSLCNACSIYGETVMGEEIGKALLEIEREDEKLSGSECEDYVALSNVLAHKGKWVE 450
Query: 325 VSLVRSRMRERSVQKIPGCS 344
V +R M+ER ++ PG S
Sbjct: 451 VEKLRKEMKERRIKTRPGYS 470
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 115/256 (44%), Gaps = 17/256 (6%)
Query: 74 LISGYVQNGQPNQALKVFLEMESKN----VKPDEFILV-SLMSATSQLGHLELAQWVDSY 128
L + ++ +P ++++F SK+ + F+ V + ++ L + + V
Sbjct: 77 LFNTLLKCSKPEDSIRIFANYASKSSLLYLNERTFVFVLGACARSASSSALRVGRIVHGM 136
Query: 129 VSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHG---- 184
V K + + + LL AK G++ A K+F EMP+R V++ +MI G H
Sbjct: 137 VKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYCSHKDKGN 196
Query: 185 -CGEDAVRLFN--SMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSP 241
A+ LF S G+ P + +L+A S +GL++ G + +K G +P
Sbjct: 197 HNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIG-SLVHGYIEKLGFTPEV 255
Query: 242 DHF--ACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHGDSDLGEIVANQLF 299
D F +VD+ S+ G L +A+ + + M + W ++ L+G + + N++
Sbjct: 256 DVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETPNLLNRMA 315
Query: 300 E--LEPQNAANYILLS 313
E ++P LLS
Sbjct: 316 ESGIKPNEITFTSLLS 331
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 74/154 (48%), Gaps = 3/154 (1%)
Query: 33 PEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFL 92
PE +V T ++D Y+K G + A +FE K+V W+++ +G NG+ N+ +
Sbjct: 253 PEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETPNLLN 312
Query: 93 EMESKNVKPDEFILVSLMSATSQLGHLELA-QWVDSYVSKSSIDLQQDHVIAALLDMNAK 151
M +KP+E SL+SA +G +E + S ++ + +H ++D+ K
Sbjct: 313 RMAESGIKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHY-GCIVDLLGK 371
Query: 152 CGNMDRALKLFKEMP-KRDLVSYCSMIQGLSIHG 184
G + A + MP K D + S+ SI+G
Sbjct: 372 AGRIQEAYQFILAMPIKPDAILLRSLCNACSIYG 405
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 206 bits (525), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 112/302 (37%), Positives = 178/302 (58%), Gaps = 4/302 (1%)
Query: 42 TMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKP 101
++ID Y K GD+ A +F +A + +V+ W+A+I+ YV Q +A+ +F M S+N KP
Sbjct: 473 SLIDLYGKMGDLTVAWRMFCEA-DTNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKP 531
Query: 102 DEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKL 161
LV+L+ A G LE Q + Y++++ ++ + AAL+DM AKCG+++++ +L
Sbjct: 532 SSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLS-LSAALIDMYAKCGHLEKSREL 590
Query: 162 FKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLV 221
F ++D V + MI G +HG E A+ LF+ M + P F +L+AC+H+GLV
Sbjct: 591 FDAGNQKDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALLSACTHAGLV 650
Query: 222 DEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSM-HEPHAGAWGALLG 280
++G F M Q Y + P+ H++C+VDLLSRSG+L +A + SM P WG LL
Sbjct: 651 EQGKKLFLKMHQ-YDVKPNLKHYSCLVDLLSRSGNLEEAESTVMSMPFSPDGVIWGTLLS 709
Query: 281 ACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQKI 340
+C HG+ ++G +A + +PQN YI+L+N+Y+AA +W + R MRE V K
Sbjct: 710 SCMTHGEFEMGIRMAERAVASDPQNDGYYIMLANMYSAAGKWEEAERAREMMRESGVGKR 769
Query: 341 PG 342
G
Sbjct: 770 AG 771
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 142/278 (51%), Gaps = 12/278 (4%)
Query: 42 TMIDGYAKAGDMAAARFLFEQATEK-DVVAWSALISGYVQNGQPNQALKVFLEMESKNVK 100
+++ Y K ++ A LF + +E+ + AW+ ++ GY + + +++F ++++ ++
Sbjct: 371 SLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIELFRKIQNLGIE 430
Query: 101 PDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALK 160
D S++S+ S +G + L + + YV K+S+DL V+ +L+D+ K G++ A +
Sbjct: 431 IDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTIS-VVNSLIDLYGKMGDLTVAWR 489
Query: 161 LFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGL 220
+F E +++++ +MI E A+ LF+ M+ E P + +L AC ++G
Sbjct: 490 MFCE-ADTNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGS 548
Query: 221 VDEGW---NYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGA 277
++ G Y + + +S S A ++D+ ++ GHL + EL + ++ A W
Sbjct: 549 LERGQMIHRYITETEHEMNLSLS----AALIDMYAKCGHLEKSRELFDAGNQKDAVCWNV 604
Query: 278 LLGACKLHGDSDLGEIVANQLFE--LEPQNAANYILLS 313
++ +HGD + + +Q+ E ++P LLS
Sbjct: 605 MISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALLS 642
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 112/256 (43%), Gaps = 4/256 (1%)
Query: 35 KNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEM 94
+N+ + +I YA G + +F T +D+ W+++I + NG ++L F M
Sbjct: 57 ENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDYARSLCFFFSM 116
Query: 95 ESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGN 154
PD F ++SA ++L + +V V K + V A+ + +KCG
Sbjct: 117 LLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGASFVYFYSKCGF 176
Query: 155 MDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGL---VPDEVAFTII 211
+ A +F EMP RD+V++ ++I G +G E + M G P+
Sbjct: 177 LQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECG 236
Query: 212 LTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPH 271
ACS+ G + EG K G++ S + M S+SG+ +AY + + +
Sbjct: 237 FQACSNLGALKEG-RCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDED 295
Query: 272 AGAWGALLGACKLHGD 287
+W +++ + GD
Sbjct: 296 MFSWTSIIASLARSGD 311
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 96/194 (49%), Gaps = 4/194 (2%)
Query: 34 EKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLE 93
++N + + Y+K G + A +F++ ++DVVAW+A+ISG+VQNG+ L +
Sbjct: 158 DRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCK 217
Query: 94 MESKNV---KPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNA 150
M S KP+ L A S LG L+ + + + K+ + V +++ +
Sbjct: 218 MHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLA-SSKFVQSSMFSFYS 276
Query: 151 KCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTI 210
K GN A F+E+ D+ S+ S+I L+ G E++ +F M +G+ PD V +
Sbjct: 277 KSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISC 336
Query: 211 ILTACSHSGLVDEG 224
++ LV +G
Sbjct: 337 LINELGKMMLVPQG 350
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 99/228 (43%), Gaps = 41/228 (17%)
Query: 5 NVASWNAMLCGFVKDGDLSSARGVFDAMPEKNV----VSFTTM----------------- 43
NV +WNAM+ +V A +FD M +N ++ T+
Sbjct: 497 NVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIH 556
Query: 44 ------------------IDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPN 85
ID YAK G + +R LF+ +KD V W+ +ISGY +G
Sbjct: 557 RYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVE 616
Query: 86 QALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAAL 145
A+ +F +ME +VKP ++L+SA + G +E + + + + + H + L
Sbjct: 617 SAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLFLKMHQYDVKPNLKHY-SCL 675
Query: 146 LDMNAKCGNMDRALKLFKEMP-KRDLVSYCSMIQGLSIHGCGEDAVRL 192
+D+ ++ GN++ A MP D V + +++ HG E +R+
Sbjct: 676 VDLLSRSGNLEEAESTVMSMPFSPDGVIWGTLLSSCMTHGEFEMGIRM 723
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/264 (20%), Positives = 112/264 (42%), Gaps = 44/264 (16%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAM-----------PEKNVVSF--------- 40
MP R+V +W A++ G V++G+ G M P F
Sbjct: 187 MPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQACSNLGAL 246
Query: 41 ----------------------TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGY 78
++M Y+K+G+ + A F + ++D+ +W+++I+
Sbjct: 247 KEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASL 306
Query: 79 VQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQ 138
++G ++ +F EM++K + PD ++ L++ ++ + + +V + L
Sbjct: 307 ARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGFVIRHCFSLDS 366
Query: 139 DHVIAALLDMNAKCGNMDRALKLFKEMPKR-DLVSYCSMIQGLSIHGCGEDAVRLFNSML 197
V +LL M K + A KLF + + + ++ +M++G C + LF +
Sbjct: 367 T-VCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIELFRKIQ 425
Query: 198 MEGLVPDEVAFTIILTACSHSGLV 221
G+ D + T ++++CSH G V
Sbjct: 426 NLGIEIDSASATSVISSCSHIGAV 449
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 66/125 (52%), Gaps = 4/125 (3%)
Query: 3 QRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQ 62
+ N++ A++ + K G L +R +FDA +K+ V + MI GY GD+ +A LF+Q
Sbjct: 565 EMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVESAIALFDQ 624
Query: 63 ATEKDVV----AWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGH 118
E DV + AL+S G Q K+FL+M +VKP+ L+ S+ G+
Sbjct: 625 MEESDVKPTGPTFLALLSACTHAGLVEQGKKLFLKMHQYDVKPNLKHYSCLVDLLSRSGN 684
Query: 119 LELAQ 123
LE A+
Sbjct: 685 LEEAE 689
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 205 bits (522), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 112/334 (33%), Positives = 185/334 (55%), Gaps = 8/334 (2%)
Query: 16 FVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALI 75
+ K G++ A N+ S ++MI GY+ G M A+ LF+ +EK++V W+A+
Sbjct: 305 YCKCGNMKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMF 364
Query: 76 SGYVQNGQPNQAL---KVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKS 132
GY+ QP+ L + F+ E+ PD ++VS++ A S ++E + + + ++
Sbjct: 365 LGYLNLRQPDSVLELARAFIANETNT--PDSLVMVSVLGACSLQAYMEPGKEIHGHSLRT 422
Query: 133 SIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRL 192
I L ++ A +DM +KCGN++ A ++F +RD V Y +MI G + HG + +
Sbjct: 423 GI-LMDKKLVTAFVDMYSKCGNVEYAERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQH 481
Query: 193 FNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLS 252
F M G PDE+ F +L+AC H GLV EG YF+SM + Y ISP H+ CM+DL
Sbjct: 482 FEDMTEGGFKPDEITFMALLSACRHRGLVLEGEKYFKSMIEAYNISPETGHYTCMIDLYG 541
Query: 253 RSGHLGDAYELMKSMH--EPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYI 310
++ L A ELM+ + E A GA L AC + +++L + V +L +E N + YI
Sbjct: 542 KAYRLDKAIELMEGIDQVEKDAVILGAFLNACSWNKNTELVKEVEEKLLVIEGSNGSRYI 601
Query: 311 LLSNIYAAAERWIDVSLVRSRMRERSVQKIPGCS 344
++N YA++ RW ++ +R +MR + ++ GCS
Sbjct: 602 QIANAYASSGRWDEMQRIRHQMRGKELEIFSGCS 635
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 119/282 (42%), Gaps = 35/282 (12%)
Query: 38 VSFTTMIDGYAKAGDMAAARFLFEQATE-KDVVAWSALISGYVQNGQPNQALKVFLEMES 96
V+ MI Y + GD+ A +F + E D ++W+ LI+GY QNG +ALK+ + ME
Sbjct: 194 VARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVSMEE 253
Query: 97 KNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMD 156
+K DE ++++ S L L++ + V + V K+ V + ++D+ KCGNM
Sbjct: 254 NGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNG-SYSNKFVSSGIVDVYCKCGNMK 312
Query: 157 RALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLV-------------- 202
A +L S SMI G S G +A RLF+S+ + LV
Sbjct: 313 YAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQ 372
Query: 203 ------------------PDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHF 244
PD + +L ACS ++ G + GI
Sbjct: 373 PDSVLELARAFIANETNTPDSLVMVSVLGACSLQAYMEPG-KEIHGHSLRTGILMDKKLV 431
Query: 245 ACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHG 286
VD+ S+ G++ A + S E + A++ C HG
Sbjct: 432 TAFVDMYSKCGNVEYAERIFDSSFERDTVMYNAMIAGCAHHG 473
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 126/248 (50%), Gaps = 40/248 (16%)
Query: 8 SWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQAT-EK 66
S N ++ + K G L AR VFD M E+NV S+ +I Y K ++ AR LFE E+
Sbjct: 25 SSNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAAYVKFNNVKEARELFESDNCER 84
Query: 67 DVVAWSALISGYVQ-NGQPNQALKVFLEMESK---NVKPDEFILVSLMSATSQLGHLELA 122
D++ ++ L+SG+ + +G ++A+++F EM K ++ D+F + +++ +++L ++
Sbjct: 85 DLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDFTVTTMVKLSAKLTNVFYG 144
Query: 123 QWVDSYVSKSSIDLQQDHVIAALLDMNAKC------------------------------ 152
+ + + K+ D + +++L+ M +KC
Sbjct: 145 EQLHGVLVKTGNDGTK-FAVSSLIHMYSKCGKFKEVCNIFNGSCVEFVDSVARNAMIAAY 203
Query: 153 ---GNMDRALKLFKEMPK-RDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAF 208
G++D+AL +F P+ D +S+ ++I G + +G E+A+++ SM GL DE +F
Sbjct: 204 CREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVSMEENGLKWDEHSF 263
Query: 209 TIILTACS 216
+L S
Sbjct: 264 GAVLNVLS 271
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 205 bits (521), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 106/306 (34%), Positives = 172/306 (56%), Gaps = 2/306 (0%)
Query: 42 TMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKP 101
+M+ Y+ G++ +A LF+ +D+++WS +I GY Q G + K F M KP
Sbjct: 350 SMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKP 409
Query: 102 DEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKL 161
+F L SL+S + + +E + V + ++ Q V ++L++M +KCG++ A +
Sbjct: 410 TDFALASLLSVSGNMAVIEGGRQVHALALCFGLE-QNSTVRSSLINMYSKCGSIKEASMI 468
Query: 162 FKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLV 221
F E + D+VS +MI G + HG ++A+ LF L G PD V F +LTAC+HSG +
Sbjct: 469 FGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQL 528
Query: 222 DEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMH-EPHAGAWGALLG 280
D G++YF M++ Y + P+ +H+ CMVDLL R+G L DA +++ M + W LL
Sbjct: 529 DLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLLI 588
Query: 281 ACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQKI 340
ACK GD + G A ++ EL+P A + L+NIY++ + + VR M+ + V K
Sbjct: 589 ACKAKGDIERGRRAAERILELDPTCATALVTLANIYSSTGNLEEAANVRKNMKAKGVIKE 648
Query: 341 PGCSKL 346
PG S +
Sbjct: 649 PGWSSI 654
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 76/328 (23%), Positives = 141/328 (42%), Gaps = 43/328 (13%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFT------------------- 41
MP RN +W A++ G V G F M +S T
Sbjct: 169 MPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYG 228
Query: 42 ------TMIDG--------------YAKAGDMAAARFLFEQATEKDVVAWSALISGYVQN 81
++ G Y + G+M LFE +E+DVV+W++LI Y +
Sbjct: 229 KAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRI 288
Query: 82 GQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHV 141
GQ +A++ F++M + V P+E S+ SA + L L + + V S+ L
Sbjct: 289 GQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNV--LSLGLNDSLS 346
Query: 142 IA-ALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEG 200
++ +++ M + CGN+ A LF+ M RD++S+ ++I G G GE+ + F+ M G
Sbjct: 347 VSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSG 406
Query: 201 LVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDA 260
P + A +L+ + ++ EG ++ +G+ + + ++++ S+ G + +A
Sbjct: 407 TKPTDFALASLLSVSGNMAVI-EGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEA 465
Query: 261 YELMKSMHEPHAGAWGALLGACKLHGDS 288
+ + A++ HG S
Sbjct: 466 SMIFGETDRDDIVSLTAMINGYAEHGKS 493
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 120/239 (50%), Gaps = 4/239 (1%)
Query: 50 AGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKN--VKPDEFILV 107
AG++ AAR +F++ D+V+W+++I YV ++AL +F M + V PD +L
Sbjct: 53 AGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLS 112
Query: 108 SLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPK 167
++ A Q ++ + + +Y K+S+ L +V ++LLDM + G +D++ ++F EMP
Sbjct: 113 VVLKACGQSSNIAYGESLHAYAVKTSL-LSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPF 171
Query: 168 RDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNY 227
R+ V++ ++I GL G ++ + F+ M + D F I L AC+ V G
Sbjct: 172 RNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAI 231
Query: 228 FQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHG 286
+ + G + + + + G + D L ++M E +W +L+ A K G
Sbjct: 232 HTHVIVR-GFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIG 289
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/324 (22%), Positives = 130/324 (40%), Gaps = 47/324 (14%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAM--------PEKNVVSF------------ 40
MP ++ SW +++ +V + A +F AM P+ +V+S
Sbjct: 66 MPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSVVLKACGQSSNIA 125
Query: 41 ---------------------TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYV 79
++++D Y + G + + +F + ++ V W+A+I+G V
Sbjct: 126 YGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAVTWTAIITGLV 185
Query: 80 QNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQD 139
G+ + L F EM D + + A + L ++ + + ++V +
Sbjct: 186 HAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGF-VTTL 244
Query: 140 HVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLME 199
V +L M +CG M L LF+ M +RD+VS+ S+I G AV F M
Sbjct: 245 CVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNS 304
Query: 200 GLVPDEVAFTIILTAC-SHSGLVDEGW-NYFQSMKQKYGISPSPDHFACMVDLLSRSGHL 257
+ P+E F + +AC S S LV W G++ S M+ + S G+L
Sbjct: 305 QVPPNEQTFASMFSACASLSRLV---WGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNL 361
Query: 258 GDAYELMKSMHEPHAGAWGALLGA 281
A L + M +W ++G
Sbjct: 362 VSASVLFQGMRCRDIISWSTIIGG 385
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 103/211 (48%), Gaps = 7/211 (3%)
Query: 34 EKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLE 93
E+N +++I+ Y+K G + A +F + D+V+ +A+I+GY ++G+ +A+ +F +
Sbjct: 443 EQNSTVRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEK 502
Query: 94 MESKNVKPDEFILVSLMSATSQLGHLELA-QWVDSYVSKSSIDLQQDHVIAALLDMNAKC 152
+PD +S+++A + G L+L + + ++ ++H ++D+ +
Sbjct: 503 SLKVGFRPDSVTFISVLTACTHSGQLDLGFHYFNMMQETYNMRPAKEHY-GCMVDLLCRA 561
Query: 153 GNMDRALKLFKEMP-KRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPD-EVAFTI 210
G + A K+ EM K+D V + +++ G E R +L L P A
Sbjct: 562 GRLSDAEKMINEMSWKKDDVVWTTLLIACKAKGDIERGRRAAERIL--ELDPTCATALVT 619
Query: 211 ILTACSHSGLVDEGWNYFQSMKQKYGISPSP 241
+ S +G ++E N ++MK K G+ P
Sbjct: 620 LANIYSSTGNLEEAANVRKNMKAK-GVIKEP 649
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 204 bits (519), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 111/313 (35%), Positives = 180/313 (57%), Gaps = 3/313 (0%)
Query: 34 EKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLE 93
E V T ++D Y K +A F++ E + V+WSA+ISGY Q Q +A+K F
Sbjct: 317 ESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKS 376
Query: 94 MESKNVKP-DEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKC 152
+ SKN + F S+ A S L + V + K S+ + + +AL+ M +KC
Sbjct: 377 LRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSL-IGSQYGESALITMYSKC 435
Query: 153 GNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIIL 212
G +D A ++F+ M D+V++ + I G + +G +A+RLF M+ G+ P+ V F +L
Sbjct: 436 GCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVL 495
Query: 213 TACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSM-HEPH 271
TACSH+GLV++G + +M +KY ++P+ DH+ CM+D+ +RSG L +A + MK+M EP
Sbjct: 496 TACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPD 555
Query: 272 AGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWIDVSLVRSR 331
A +W L C H + +LGEI +L +L+P++ A Y+L N+Y A +W + + +
Sbjct: 556 AMSWKCFLSGCWTHKNLELGEIAGEELRQLDPEDTAGYVLPFNLYTWAGKWEEAAEMMKL 615
Query: 332 MRERSVQKIPGCS 344
M ER ++K CS
Sbjct: 616 MNERMLKKELSCS 628
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 125/249 (50%), Gaps = 3/249 (1%)
Query: 41 TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVK 100
T +++ Y K G + A+ +F+Q K VA + L+ GY Q G+ ALK+F+++ ++ V+
Sbjct: 223 TGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVE 282
Query: 101 PDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALK 160
D F+ ++ A + L L L + + + V+K ++ + V L+D KC + + A +
Sbjct: 283 WDSFVFSVVLKACASLEELNLGKQIHACVAKLGLE-SEVSVGTPLVDFYIKCSSFESACR 341
Query: 161 LFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGL-VPDEVAFTIILTACSHSG 219
F+E+ + + VS+ ++I G E+AV+ F S+ + + + +T I ACS
Sbjct: 342 AFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLA 401
Query: 220 LVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALL 279
+ G ++ I A ++ + S+ G L DA E+ +SM P AW A +
Sbjct: 402 DCNIGGQVHADAIKRSLIGSQYGESA-LITMYSKCGCLDDANEVFESMDNPDIVAWTAFI 460
Query: 280 GACKLHGDS 288
+G++
Sbjct: 461 SGHAYYGNA 469
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/321 (22%), Positives = 135/321 (42%), Gaps = 40/321 (12%)
Query: 10 NAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVV 69
N +L + + L A +FD M E N VS TTMI YA+ G + A LF
Sbjct: 122 NCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLF--------- 172
Query: 70 AWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYV 129
SG + +G KP + +L+ + L+ + + ++V
Sbjct: 173 ------SGMLASGD----------------KPPSSMYTTLLKSLVNPRALDFGRQIHAHV 210
Query: 130 SKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDA 189
++ + + +++M KCG + A ++F +M + V+ ++ G + G DA
Sbjct: 211 IRAGL-CSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDA 269
Query: 190 VRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVD 249
++LF ++ EG+ D F+++L AC+ ++ G + K G+ +VD
Sbjct: 270 LKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLG-KQIHACVAKLGLESEVSVGTPLVD 328
Query: 250 LLSRSGHLGDAYELMKSMHEPHAGAWGALL-GACKLHGDSDLGEIVANQLFELEPQNAA- 307
+ A + + EP+ +W A++ G C++ S E V L +NA+
Sbjct: 329 FYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQM---SQFEEAVKT-FKSLRSKNASI 384
Query: 308 -NYILLSNIYAAAERWIDVSL 327
N ++I+ A D ++
Sbjct: 385 LNSFTYTSIFQACSVLADCNI 405
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 203 bits (517), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 117/385 (30%), Positives = 191/385 (49%), Gaps = 42/385 (10%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSF-------------------- 40
MP+R+V +WNA++ G+ +D D A F M + V S
Sbjct: 406 MPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLER 465
Query: 41 --------------------TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQ 80
++I YAK GD+++++ LF ++++ W+A+++
Sbjct: 466 GKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAH 525
Query: 81 NGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDH 140
+G + LK+ +M S V D+F +SA ++L LE Q + K +
Sbjct: 526 HGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFE-HDSF 584
Query: 141 VIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEG 200
+ A DM +KCG + +K+ R L S+ +I L HG E+ F+ ML G
Sbjct: 585 IFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMG 644
Query: 201 LVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDA 260
+ P V F +LTACSH GLVD+G Y+ + + +G+ P+ +H C++DLL RSG L +A
Sbjct: 645 IKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEA 704
Query: 261 YELMKSM-HEPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAA 319
+ M +P+ W +LL +CK+HG+ D G A L +LEP++ + Y+L SN++A
Sbjct: 705 ETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATT 764
Query: 320 ERWIDVSLVRSRMRERSVQKIPGCS 344
RW DV VR +M ++++K CS
Sbjct: 765 GRWEDVENVRKQMGFKNIKKKQACS 789
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/326 (25%), Positives = 154/326 (47%), Gaps = 42/326 (12%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEK----NVVSFTT-------------- 42
MP +++ SWN+++ FV DG A G+ +M N V+FT+
Sbjct: 305 MPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKG 364
Query: 43 ---------------------MIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQN 81
++ Y K G+M+ +R + Q +DVVAW+ALI GY ++
Sbjct: 365 RILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAED 424
Query: 82 GQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGH-LELAQWVDSYVSKSSIDLQQDH 140
P++AL F M + V + +VS++SA G LE + + +Y+ + + +H
Sbjct: 425 EDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFE-SDEH 483
Query: 141 VIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEG 200
V +L+ M AKCG++ + LF + R+++++ +M+ + HG GE+ ++L + M G
Sbjct: 484 VKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFG 543
Query: 201 LVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDA 260
+ D+ +F+ L+A + +++EG + K G F D+ S+ G +G+
Sbjct: 544 VSLDQFSFSEGLSAAAKLAVLEEG-QQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEV 602
Query: 261 YELMKSMHEPHAGAWGALLGACKLHG 286
+++ +W L+ A HG
Sbjct: 603 VKMLPPSVNRSLPSWNILISALGRHG 628
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/357 (21%), Positives = 147/357 (41%), Gaps = 43/357 (12%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMP--------------------------- 33
MP RNV SW +++ G+ G+ ++ M
Sbjct: 103 MPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLG 162
Query: 34 ------------EKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQN 81
E + ++I G++ A ++F+Q +E+D ++W+++ + Y QN
Sbjct: 163 RQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQN 222
Query: 82 GQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHV 141
G ++ ++F M + + + + +L+S + H + + + V K D V
Sbjct: 223 GHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFD-SVVCV 281
Query: 142 IAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGL 201
LL M A G A +FK+MP +DL+S+ S++ G DA+ L SM+ G
Sbjct: 282 CNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGK 341
Query: 202 VPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAY 261
+ V FT L AC ++G + G+ + +V + + G + ++
Sbjct: 342 SVNYVTFTSALAACFTPDFFEKG-RILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESR 400
Query: 262 ELMKSMHEPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAA 318
++ M AW AL+G D D + A Q +E ++NYI + ++ +A
Sbjct: 401 RVLLQMPRRDVVAWNALIGGYAEDEDPDKA-LAAFQTMRVEGV-SSNYITVVSVLSA 455
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 142/327 (43%), Gaps = 54/327 (16%)
Query: 1 MPQRNVASWNAMLCGFVKDG-------------------------DLSSARGVFDAMPEK 35
MP RN SWN M+ G V+ G L +A G +M +
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE 60
Query: 36 ---------------NVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQ 80
+V T ++ Y G ++ +R +FE+ +++VV+W++L+ GY
Sbjct: 61 GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSD 120
Query: 81 NGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDH 140
G+P + + ++ M + V +E + ++S+ L L + + V KS ++ +
Sbjct: 121 KGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLE-SKLA 179
Query: 141 VIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEG 200
V +L+ M GN+D A +F +M +RD +S+ S+ + +G E++ R+F+ M
Sbjct: 180 VENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRR-- 237
Query: 201 LVPDEVAFTIILTACSHSGLVD-EGWNY-FQSMKQKYGISPSPDHFACMVDLLSR----S 254
DEV T + T S G VD + W + K G D C+ + L R +
Sbjct: 238 -FHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGF----DSVVCVCNTLLRMYAGA 292
Query: 255 GHLGDAYELMKSMHEPHAGAWGALLGA 281
G +A + K M +W +L+ +
Sbjct: 293 GRSVEANLVFKQMPTKDLISWNSLMAS 319
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 118/225 (52%), Gaps = 9/225 (4%)
Query: 66 KDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHL--ELAQ 123
++ V+W+ ++SG V+ G + ++ F +M +KP F++ SL++A + G + E Q
Sbjct: 4 RNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQ 63
Query: 124 WVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIH 183
V +V+KS + L +V A+L + G + + K+F+EMP R++VS+ S++ G S
Sbjct: 64 -VHGFVAKSGL-LSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDK 121
Query: 184 GCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQ--KYGISPSP 241
G E+ + ++ M EG+ +E + ++++++C GL+ + Q + Q K G+
Sbjct: 122 GEPEEVIDIYKGMRGEGVGCNENSMSLVISSC---GLLKDESLGRQIIGQVVKSGLESKL 178
Query: 242 DHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHG 286
++ +L G++ A + M E +W ++ A +G
Sbjct: 179 AVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNG 223
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 203 bits (517), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 117/385 (30%), Positives = 191/385 (49%), Gaps = 42/385 (10%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSF-------------------- 40
MP+R+V +WNA++ G+ +D D A F M + V S
Sbjct: 423 MPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLER 482
Query: 41 --------------------TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQ 80
++I YAK GD+++++ LF ++++ W+A+++
Sbjct: 483 GKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAH 542
Query: 81 NGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDH 140
+G + LK+ +M S V D+F +SA ++L LE Q + K +
Sbjct: 543 HGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFE-HDSF 601
Query: 141 VIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEG 200
+ A DM +KCG + +K+ R L S+ +I L HG E+ F+ ML G
Sbjct: 602 IFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMG 661
Query: 201 LVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDA 260
+ P V F +LTACSH GLVD+G Y+ + + +G+ P+ +H C++DLL RSG L +A
Sbjct: 662 IKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEA 721
Query: 261 YELMKSM-HEPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAA 319
+ M +P+ W +LL +CK+HG+ D G A L +LEP++ + Y+L SN++A
Sbjct: 722 ETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATT 781
Query: 320 ERWIDVSLVRSRMRERSVQKIPGCS 344
RW DV VR +M ++++K CS
Sbjct: 782 GRWEDVENVRKQMGFKNIKKKQACS 806
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/326 (25%), Positives = 154/326 (47%), Gaps = 42/326 (12%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEK----NVVSFTT-------------- 42
MP +++ SWN+++ FV DG A G+ +M N V+FT+
Sbjct: 322 MPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKG 381
Query: 43 ---------------------MIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQN 81
++ Y K G+M+ +R + Q +DVVAW+ALI GY ++
Sbjct: 382 RILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAED 441
Query: 82 GQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGH-LELAQWVDSYVSKSSIDLQQDH 140
P++AL F M + V + +VS++SA G LE + + +Y+ + + +H
Sbjct: 442 EDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFE-SDEH 500
Query: 141 VIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEG 200
V +L+ M AKCG++ + LF + R+++++ +M+ + HG GE+ ++L + M G
Sbjct: 501 VKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFG 560
Query: 201 LVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDA 260
+ D+ +F+ L+A + +++EG + K G F D+ S+ G +G+
Sbjct: 561 VSLDQFSFSEGLSAAAKLAVLEEG-QQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEV 619
Query: 261 YELMKSMHEPHAGAWGALLGACKLHG 286
+++ +W L+ A HG
Sbjct: 620 VKMLPPSVNRSLPSWNILISALGRHG 645
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/357 (21%), Positives = 147/357 (41%), Gaps = 43/357 (12%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMP--------------------------- 33
MP RNV SW +++ G+ G+ ++ M
Sbjct: 120 MPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLG 179
Query: 34 ------------EKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQN 81
E + ++I G++ A ++F+Q +E+D ++W+++ + Y QN
Sbjct: 180 RQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQN 239
Query: 82 GQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHV 141
G ++ ++F M + + + + +L+S + H + + + V K D V
Sbjct: 240 GHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFD-SVVCV 298
Query: 142 IAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGL 201
LL M A G A +FK+MP +DL+S+ S++ G DA+ L SM+ G
Sbjct: 299 CNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGK 358
Query: 202 VPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAY 261
+ V FT L AC ++G + G+ + +V + + G + ++
Sbjct: 359 SVNYVTFTSALAACFTPDFFEKG-RILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESR 417
Query: 262 ELMKSMHEPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAA 318
++ M AW AL+G D D + A Q +E ++NYI + ++ +A
Sbjct: 418 RVLLQMPRRDVVAWNALIGGYAEDEDPDKA-LAAFQTMRVEGV-SSNYITVVSVLSA 472
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 127/244 (52%), Gaps = 9/244 (3%)
Query: 47 YAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFIL 106
Y K G + AR LF+ ++ V+W+ ++SG V+ G + ++ F +M +KP F++
Sbjct: 2 YTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVI 61
Query: 107 VSLMSATSQLGHL--ELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKE 164
SL++A + G + E Q V +V+KS + L +V A+L + G + + K+F+E
Sbjct: 62 ASLVTACGRSGSMFREGVQ-VHGFVAKSGL-LSDVYVSTAILHLYGVYGLVSCSRKVFEE 119
Query: 165 MPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEG 224
MP R++VS+ S++ G S G E+ + ++ M EG+ +E + ++++++C GL+ +
Sbjct: 120 MPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSC---GLLKDE 176
Query: 225 WNYFQSMKQ--KYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGAC 282
Q + Q K G+ ++ +L G++ A + M E +W ++ A
Sbjct: 177 SLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAY 236
Query: 283 KLHG 286
+G
Sbjct: 237 AQNG 240
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 142/327 (43%), Gaps = 54/327 (16%)
Query: 1 MPQRNVASWNAMLCGFVKDG-------------------------DLSSARGVFDAMPEK 35
MP RN SWN M+ G V+ G L +A G +M +
Sbjct: 18 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE 77
Query: 36 ---------------NVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQ 80
+V T ++ Y G ++ +R +FE+ +++VV+W++L+ GY
Sbjct: 78 GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSD 137
Query: 81 NGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDH 140
G+P + + ++ M + V +E + ++S+ L L + + V KS ++ +
Sbjct: 138 KGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLE-SKLA 196
Query: 141 VIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEG 200
V +L+ M GN+D A +F +M +RD +S+ S+ + +G E++ R+F+ M
Sbjct: 197 VENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRR-- 254
Query: 201 LVPDEVAFTIILTACSHSGLVD-EGWNY-FQSMKQKYGISPSPDHFACMVDLLSR----S 254
DEV T + T S G VD + W + K G D C+ + L R +
Sbjct: 255 -FHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGF----DSVVCVCNTLLRMYAGA 309
Query: 255 GHLGDAYELMKSMHEPHAGAWGALLGA 281
G +A + K M +W +L+ +
Sbjct: 310 GRSVEANLVFKQMPTKDLISWNSLMAS 336
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 203 bits (516), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 103/304 (33%), Positives = 178/304 (58%), Gaps = 3/304 (0%)
Query: 41 TTMIDGYAKAGDMAAARFLFEQ-ATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNV 99
+++ Y D+ LFE D V+W+ +++ +Q+ QP + L++F M
Sbjct: 410 NSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSEC 469
Query: 100 KPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRAL 159
+PD + +L+ ++ L+L V Y K+ + +Q + L+DM AKCG++ +A
Sbjct: 470 EPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQ-FIKNGLIDMYAKCGSLGQAR 528
Query: 160 KLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSG 219
++F M RD+VS+ ++I G + G GE+A+ LF M G+ P+ V F +LTACSH G
Sbjct: 529 RIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVG 588
Query: 220 LVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMH-EPHAGAWGAL 278
LV+EG + +M+ ++GISP+ +H +C+VDLL+R+G L +A + M EP W L
Sbjct: 589 LVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTL 648
Query: 279 LGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQ 338
L ACK G+ L + A + +++P N+ ++LL +++A++ W + +L+RS M++ V+
Sbjct: 649 LSACKTQGNVHLAQKAAENILKIDPFNSTAHVLLCSMHASSGNWENAALLRSSMKKHDVK 708
Query: 339 KIPG 342
KIPG
Sbjct: 709 KIPG 712
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 147/299 (49%), Gaps = 13/299 (4%)
Query: 8 SWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDG-----YAKAGDMAAARFLFEQ 62
++ +++C L+ R + D + N + T+++ Y K G + AR +F+
Sbjct: 69 TYISLICACSSSRSLAQGRKIHDHILNSNC-KYDTILNNHILSMYGKCGSLRDAREVFDF 127
Query: 63 ATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELA 122
E+++V+++++I+GY QNGQ +A++++L+M +++ PD+F S++ A + + L
Sbjct: 128 MPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLG 187
Query: 123 QWVDSYVSKSSIDLQQDHVIA--ALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGL 180
+ + + V K H+IA AL+ M + M A ++F +P +DL+S+ S+I G
Sbjct: 188 KQLHAQVIKLE---SSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGF 244
Query: 181 SIHGCGEDAVRLFNSMLMEGLV-PDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISP 239
S G +A+ ML G+ P+E F L ACS D G + + K ++
Sbjct: 245 SQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYG-SQIHGLCIKSELAG 303
Query: 240 SPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHGDSDLGEIVANQL 298
+ + D+ +R G L A + + P +W ++ +G +D V +Q+
Sbjct: 304 NAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQM 362
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 112/245 (45%), Gaps = 3/245 (1%)
Query: 36 NVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEME 95
N ++ ++ D YA+ G + +AR +F+Q D +W+ +I+G NG ++A+ VF +M
Sbjct: 304 NAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMR 363
Query: 96 SKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNM 155
S PD L SL+ A ++ L + SY+ K L V +LL M C ++
Sbjct: 364 SSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGF-LADLTVCNSLLTMYTFCSDL 422
Query: 156 DRALKLFKEMPKR-DLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTA 214
LF++ D VS+ +++ H + +RLF ML+ PD + +L
Sbjct: 423 YCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRG 482
Query: 215 CSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGA 274
C + G + K G++P ++D+ ++ G LG A + SM +
Sbjct: 483 CVEISSLKLG-SQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVS 541
Query: 275 WGALL 279
W L+
Sbjct: 542 WSTLI 546
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/328 (22%), Positives = 148/328 (45%), Gaps = 47/328 (14%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVV----SFTTMIDGYAKAGDMAAA 56
MP+RN+ S+ +++ G+ ++G + A ++ M ++++V +F ++I A + D+
Sbjct: 128 MPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLG 187
Query: 57 RFLFEQATE-----------------------------------KDVVAWSALISGYVQN 81
+ L Q + KD+++WS++I+G+ Q
Sbjct: 188 KQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQL 247
Query: 82 GQPNQALKVFLEMESKNV-KPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDH 140
G +AL EM S V P+E+I S + A S L + + KS + +
Sbjct: 248 GFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSEL---AGN 304
Query: 141 VIA--ALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLM 198
IA +L DM A+CG ++ A ++F ++ + D S+ +I GL+ +G ++AV +F+ M
Sbjct: 305 AIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRS 364
Query: 199 EGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLG 258
G +PD ++ +L A + + +G S K+G ++ + + L
Sbjct: 365 SGFIPDAISLRSLLCAQTKPMALSQGMQ-IHSYIIKWGFLADLTVCNSLLTMYTFCSDLY 423
Query: 259 DAYELMKSM-HEPHAGAWGALLGACKLH 285
+ L + + + +W +L AC H
Sbjct: 424 CCFNLFEDFRNNADSVSWNTILTACLQH 451
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 202 bits (515), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 123/389 (31%), Positives = 202/389 (51%), Gaps = 47/389 (12%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVS---FT---------------- 41
MP RN+ SWN ++ F + G S + +F M ++ V FT
Sbjct: 93 MPYRNIFSWNIIIGEFSRSGFASKSIDLFLRMWRESCVRPDDFTLPLILRACSASREAKS 152
Query: 42 ---------------------TMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQ 80
++ Y G + AR LF+ +D V ++A+ GYVQ
Sbjct: 153 GDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDDMPVRDSVLYTAMFGGYVQ 212
Query: 81 NGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSK--SSIDLQQ 138
G+ L +F EM D ++VSL+ A QLG L+ + V + + S + L
Sbjct: 213 QGEAMLGLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHGKSVHGWCIRRCSCLGLNL 272
Query: 139 DHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLM 198
+ I DM KC +D A +F M +RD++S+ S+I G + G + +LF+ ML
Sbjct: 273 GNAIT---DMYVKCSILDYAHTVFVNMSRRDVISWSSLILGYGLDGDVVMSFKLFDEMLK 329
Query: 199 EGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLG 258
EG+ P+ V F +L+AC+H GLV++ W YF+ M Q+Y I P H+A + D +SR+G L
Sbjct: 330 EGIEPNAVTFLGVLSACAHGGLVEKSWLYFRLM-QEYNIVPELKHYASVADCMSRAGLLE 388
Query: 259 DAYELMKSMH-EPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYA 317
+A + ++ M +P GA+L CK++G+ ++GE VA +L +L+P+ A+ Y+ L+ +Y+
Sbjct: 389 EAEKFLEDMPVKPDEAVMGAVLSGCKVYGNVEVGERVARELIQLKPRKASYYVTLAGLYS 448
Query: 318 AAERWIDVSLVRSRMRERSVQKIPGCSKL 346
AA R+ + +R M+E+ + K+PGCS +
Sbjct: 449 AAGRFDEAESLRQWMKEKQISKVPGCSSI 477
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 85/191 (44%), Gaps = 3/191 (1%)
Query: 36 NVVSFTTMIDGYAKAGDMAAARF-LFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEM 94
NVV + ++ Y+K + +F +++ +W+ +I + ++G ++++ +FL M
Sbjct: 65 NVVLSSKLVLAYSKLNHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRM 124
Query: 95 ESKN-VKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCG 153
++ V+PD+F L ++ A S + + K V +AL+ M G
Sbjct: 125 WRESCVRPDDFTLPLILRACSASREAKSGDLIHVLCLKLGFS-SSLFVSSALVIMYVDMG 183
Query: 154 NMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILT 213
+ A KLF +MP RD V Y +M G G + +F M G D V +L
Sbjct: 184 KLLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLM 243
Query: 214 ACSHSGLVDEG 224
AC G + G
Sbjct: 244 ACGQLGALKHG 254
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 202 bits (515), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 110/308 (35%), Positives = 183/308 (59%), Gaps = 6/308 (1%)
Query: 39 SFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKN 98
SF T+ YAK + A+ FE T +++++W+A+ISG+ QNG ++ALK+FL ++
Sbjct: 412 SFITL---YAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSAAAET 468
Query: 99 VKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIA-ALLDMNAKCGNMDR 157
+ P+E+ S+++A + + + Q + + L V++ ALLDM AK GN+D
Sbjct: 469 M-PNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDE 527
Query: 158 ALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSH 217
+ K+F EM +++ + S+I S HG E + LF+ M+ E + PD V F +LTAC+
Sbjct: 528 SEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNR 587
Query: 218 SGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSM-HEPHAGAWG 276
G+VD+G+ F M + Y + PS +H++CMVD+L R+G L +A ELM + P
Sbjct: 588 KGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEVPGGPGESMLQ 647
Query: 277 ALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERS 336
++LG+C+LHG+ +G VA E++P+ + +Y+ + NIYA E W + +R MR+++
Sbjct: 648 SMLGSCRLHGNVKMGAKVAELAMEMKPELSGSYVQMYNIYAEKEEWDKAAEIRKAMRKKN 707
Query: 337 VQKIPGCS 344
V K G S
Sbjct: 708 VSKEAGFS 715
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/321 (23%), Positives = 140/321 (43%), Gaps = 44/321 (13%)
Query: 5 NVASWNAMLCGFVKDG-------DLSSARGVFDAMPEKNVVSF----------------- 40
+V SWN +L GF + + SA VFDA +SF
Sbjct: 141 DVVSWNTILSGFDDNQIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTV 200
Query: 41 ------------TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPN-QA 87
+ I Y+++G AR +F++ + KD+++W++L+SG Q G +A
Sbjct: 201 VKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEA 260
Query: 88 LKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLD 147
+ +F +M + V+ D S+++ L+LA+ + K + + V L+
Sbjct: 261 VVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLE-VGNILMS 319
Query: 148 MNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVA 207
+KCG ++ +F +M +R++VS+ +MI +DAV +F +M +G+ P+EV
Sbjct: 320 RYSKCGVLEAVKSVFHQMSERNVVSWTTMISSNK-----DDAVSIFLNMRFDGVYPNEVT 374
Query: 208 FTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSM 267
F ++ A + + EG + K G P + L ++ L DA + + +
Sbjct: 375 FVGLINAVKCNEQIKEGLK-IHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDI 433
Query: 268 HEPHAGAWGALLGACKLHGDS 288
+W A++ +G S
Sbjct: 434 TFREIISWNAMISGFAQNGFS 454
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 91/173 (52%), Gaps = 7/173 (4%)
Query: 47 YAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFIL 106
Y KAG A +FE + DVV+W+ ++SG+ N AL + M+S V D F
Sbjct: 121 YRKAGRFDNALCIFENLVDPDVVSWNTILSGFDDN---QIALNFVVRMKSAGVVFDAFTY 177
Query: 107 VSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIA-ALLDMNAKCGNMDRALKLFKEM 165
+ +S L + S V K+ L+ D V+ + + M ++ G+ A ++F EM
Sbjct: 178 STALSFCVGSEGFLLGLQLQSTVVKTG--LESDLVVGNSFITMYSRSGSFRGARRVFDEM 235
Query: 166 PKRDLVSYCSMIQGLSIHGC-GEDAVRLFNSMLMEGLVPDEVAFTIILTACSH 217
+D++S+ S++ GLS G G +AV +F M+ EG+ D V+FT ++T C H
Sbjct: 236 SFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCH 288
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 94/204 (46%), Gaps = 42/204 (20%)
Query: 4 RNVASWNAMLCGFVKDGDLSSARGVF-----DAMPEK-------NVVSF----------- 40
R + SWNAM+ GF ++G A +F + MP + N ++F
Sbjct: 436 REIISWNAMISGFAQNGFSHEALKMFLSAAAETMPNEYTFGSVLNAIAFAEDISVKQGQR 495
Query: 41 -----------------TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQ 83
+ ++D YAK G++ + +F + ++K+ W+++IS Y +G
Sbjct: 496 CHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGD 555
Query: 84 PNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELA-QWVDSYVSKSSIDLQQDHVI 142
+ +F +M +NV PD +S+++A ++ G ++ + + + +++ +H
Sbjct: 556 FETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHY- 614
Query: 143 AALLDMNAKCGNMDRALKLFKEMP 166
+ ++DM + G + A +L E+P
Sbjct: 615 SCMVDMLGRAGRLKEAEELMSEVP 638
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 202 bits (515), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 106/298 (35%), Positives = 174/298 (58%), Gaps = 5/298 (1%)
Query: 50 AGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSL 109
+G M + + ++ V+W+++ISGYV Q A +F M + PD+F ++
Sbjct: 550 SGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATV 609
Query: 110 MSATSQLGHLELAQWVDSYVSKSSIDLQQD-HVIAALLDMNAKCGNMDRALKLFKEMPKR 168
+ + L L + + + V K +LQ D ++ + L+DM +KCG++ + +F++ +R
Sbjct: 610 LDTCANLASAGLGKQIHAQVIKK--ELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRR 667
Query: 169 DLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYF 228
D V++ +MI G + HG GE+A++LF M++E + P+ V F IL AC+H GL+D+G YF
Sbjct: 668 DFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYF 727
Query: 229 QSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSM-HEPHAGAWGALLGACKLHGD 287
MK+ YG+ P H++ MVD+L +SG + A EL++ M E W LLG C +H +
Sbjct: 728 YMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRN 787
Query: 288 S-DLGEIVANQLFELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQKIPGCS 344
+ ++ E L L+PQ+++ Y LLSN+YA A W VS +R MR ++K PGCS
Sbjct: 788 NVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCS 845
Score = 114 bits (286), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 93/332 (28%), Positives = 150/332 (45%), Gaps = 55/332 (16%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEK------------------------- 35
MP R+V SWN+ML G++++G+ + VF M +
Sbjct: 140 MPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLG 199
Query: 36 --------------NVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQN 81
+VV+ + ++D YAK + +F+ EK+ V+WSA+I+G VQN
Sbjct: 200 MQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQN 259
Query: 82 GQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHV 141
+ ALK F EM+ N + I S++ + + L L L + ++ KS D D +
Sbjct: 260 NLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKS--DFAADGI 317
Query: 142 I-AALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEG 200
+ A LDM AKC NM A LF + SY +MI G S G A+ LF+ ++ G
Sbjct: 318 VRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSG 377
Query: 201 LVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYG--ISPSPDHFACM----VDLLSRS 254
L DE++ + + AC+ + EG Q YG I S C+ +D+ +
Sbjct: 378 LGFDEISLSGVFRACALVKGLSEGL-------QIYGLAIKSSLSLDVCVANAAIDMYGKC 430
Query: 255 GHLGDAYELMKSMHEPHAGAWGALLGACKLHG 286
L +A+ + M A +W A++ A + +G
Sbjct: 431 QALAEAFRVFDEMRRRDAVSWNAIIAAHEQNG 462
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 111/208 (53%), Gaps = 3/208 (1%)
Query: 10 NAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVV 69
N +L + D SA VFD MP ++VVS+ MI+GY+K+ DM A F +DVV
Sbjct: 87 NCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVV 146
Query: 70 AWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYV 129
+W++++SGY+QNG+ ++++VF++M + ++ D ++ S L L + V
Sbjct: 147 SWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIV 206
Query: 130 SKSSIDLQQDHVIA-ALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGED 188
+ D D V A ALLDM AK +L++F+ +P+++ VS+ ++I G +
Sbjct: 207 VRVGCD--TDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSL 264
Query: 189 AVRLFNSMLMEGLVPDEVAFTIILTACS 216
A++ F M + + +L +C+
Sbjct: 265 ALKFFKEMQKVNAGVSQSIYASVLRSCA 292
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 86/325 (26%), Positives = 144/325 (44%), Gaps = 45/325 (13%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNV----------------------- 37
+P++N SW+A++ G V++ LS A F M + N
Sbjct: 241 IPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLG 300
Query: 38 ----------------VSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQN 81
+ T +D YAK +M A+ LF+ + + +++A+I+GY Q
Sbjct: 301 GQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQE 360
Query: 82 GQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHV 141
+AL +F + S + DE L + A + + L + KSS+ L D
Sbjct: 361 EHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSL--DVC 418
Query: 142 IA-ALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEG 200
+A A +DM KC + A ++F EM +RD VS+ ++I +G G + + LF SML
Sbjct: 419 VANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSR 478
Query: 201 LVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDA 260
+ PDE F IL AC+ G + G S+ K G++ + ++D+ S+ G + +A
Sbjct: 479 IEPDEFTFGSILKACT-GGSLGYGMEIHSSI-VKSGMASNSSVGCSLIDMYSKCGMIEEA 536
Query: 261 YELMKSMHEPHAGAWGALLGACKLH 285
E + S A G + K+H
Sbjct: 537 -EKIHSRFFQRANVSGTMEELEKMH 560
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 104/189 (55%), Gaps = 3/189 (1%)
Query: 34 EKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLE 93
+ +V +T++D Y+K GD+ +R +FE++ +D V W+A+I GY +G+ +A+++F
Sbjct: 635 QSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFER 694
Query: 94 MESKNVKPDEFILVSLMSATSQLGHLELA-QWVDSYVSKSSIDLQQDHVIAALLDMNAKC 152
M +N+KP+ +S++ A + +G ++ ++ +D Q H + ++D+ K
Sbjct: 695 MILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHY-SNMVDILGKS 753
Query: 153 GNMDRALKLFKEMP-KRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTII 211
G + RAL+L +EMP + D V + +++ +IH + + L+ D A+T++
Sbjct: 754 GKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLL 813
Query: 212 LTACSHSGL 220
+ +G+
Sbjct: 814 SNVYADAGM 822
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 128/318 (40%), Gaps = 62/318 (19%)
Query: 5 NVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQAT 64
+V NA + + K L+ A VFD M ++ VS
Sbjct: 416 DVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVS------------------------- 450
Query: 65 EKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQW 124
W+A+I+ + QNG+ + L +F+ M ++PDEF S++ A + G L
Sbjct: 451 ------WNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTG-GSLGYGME 503
Query: 125 VDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRD--------------- 169
+ S + KS + V +L+DM +KCG ++ A K+ +R
Sbjct: 504 IHSSIVKSGM-ASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNK 562
Query: 170 -----LVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEG 224
VS+ S+I G + EDA LF M+ G+ PD+ + +L C++ G
Sbjct: 563 RLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLG 622
Query: 225 WNYFQSMKQKYGISPSPDHFAC--MVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGAC 282
+ +K D + C +VD+ S+ G L D+ + + W A++
Sbjct: 623 KQIHAQVIKK---ELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGY 679
Query: 283 KLHGDSDLGEIVANQLFE 300
HG + A QLFE
Sbjct: 680 AHHGKGE----EAIQLFE 693
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 202 bits (515), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 112/318 (35%), Positives = 181/318 (56%), Gaps = 8/318 (2%)
Query: 34 EKNVVSFTTMIDGYAKAGDMAAARFLFEQ--ATEKDVVAWSALISGYVQNGQPNQALKVF 91
+N+V ++++D Y K D+ AR +F+ ++VV+W+++I+ Y QN + ++A+++F
Sbjct: 163 RRNIVVSSSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELF 222
Query: 92 LEMES--KNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMN 149
+ + + ++F+L S++SA S LG L+ + V++ + V +LLDM
Sbjct: 223 RSFNAALTSDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYE-SNTVVATSLLDMY 281
Query: 150 AKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFT 209
AKCG++ A K+F + ++SY SMI + HG GE AV+LF+ M+ + P+ V
Sbjct: 282 AKCGSLSCAEKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLL 341
Query: 210 IILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMH- 268
+L ACSHSGLV+EG Y M +KYG+ P H+ C+VD+L R G + +AYEL K++
Sbjct: 342 GVLHACSHSGLVNEGLEYLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEV 401
Query: 269 --EPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWIDVS 326
E A WGALL A +LHG ++ + +L + Q + YI LSN YA + W D
Sbjct: 402 GAEQGALLWGALLSAGRLHGRVEIVSEASKRLIQSNQQVTSAYIALSNAYAVSGGWEDSE 461
Query: 327 LVRSRMRERSVQKIPGCS 344
+R M+ K CS
Sbjct: 462 SLRLEMKRSGNVKERACS 479
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 147/291 (50%), Gaps = 19/291 (6%)
Query: 39 SFTT--MIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEM-E 95
+FT ++ Y K ++ AR LF++ E +VV+W+++ISGY G+P AL +F +M E
Sbjct: 64 TFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGKPQNALSMFQKMHE 123
Query: 96 SKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVI-AALLDMNAKCGN 154
+ V P+E+ S+ A S L + + + + + S L+++ V+ ++L+DM KC +
Sbjct: 124 DRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISG--LRRNIVVSSSLVDMYGKCND 181
Query: 155 MDRALKLFKEMP--KRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPD---EVAFT 209
++ A ++F M R++VS+ SMI + + G +A+ LF S L D +
Sbjct: 182 VETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRS-FNAALTSDRANQFMLA 240
Query: 210 IILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHE 269
+++ACS G + G + + G + ++D+ ++ G L A ++ +
Sbjct: 241 SVISACSSLGRLQWG-KVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRC 299
Query: 270 PHAGAWGALLGACKLHGDSDLGEIVANQLFE--LEPQNAANYILLSNIYAA 318
++ +++ A HG LGE A +LF+ + + NY+ L + A
Sbjct: 300 HSVISYTSMIMAKAKHG---LGE-AAVKLFDEMVAGRINPNYVTLLGVLHA 346
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 202 bits (514), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 110/386 (28%), Positives = 201/386 (52%), Gaps = 45/386 (11%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEK------------------------- 35
+P+RN+ S+ +++ GFV G+ A +F M E+
Sbjct: 184 IPERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYVG 243
Query: 36 --------------NVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQN 81
N +ID Y+K GD+ AR FE EK VAW+ +I+GY +
Sbjct: 244 KQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALH 303
Query: 82 GQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHV 141
G +AL + +M V D+F L ++ +++L LEL + + + ++ + +
Sbjct: 304 GYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGF---ESEI 360
Query: 142 IA--ALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLME 199
+A AL+D +K G +D A +F ++P+++++S+ +++ G + HG G DAV+LF M+
Sbjct: 361 VANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEKMIAA 420
Query: 200 GLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGD 259
+ P+ V F +L+AC++SGL ++GW F SM + +GI P H+ACM++LL R G L +
Sbjct: 421 NVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPRAMHYACMIELLGRDGLLDE 480
Query: 260 AYELMKSMH-EPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAA 318
A ++ + W ALL AC++ + +LG +VA +L+ + P+ NY+++ N+Y +
Sbjct: 481 AIAFIRRAPLKTTVNMWAALLNACRMQENLELGRVVAEKLYGMGPEKLGNYVVMYNMYNS 540
Query: 319 AERWIDVSLVRSRMRERSVQKIPGCS 344
+ + + V + + + +P C+
Sbjct: 541 MGKTAEAAGVLETLESKGLSMMPACT 566
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 144/298 (48%), Gaps = 32/298 (10%)
Query: 6 VASWNAMLCGFVKDGDLSSARGVFDAM------PEKNVVSFTTMIDGYAKAGDMAAARFL 59
V++++A++ ++ + + V+ M PE+ +++ ++ + K G + AR L
Sbjct: 123 VSTYDALVEACIRLKSIRCVKRVYGFMMSNGFEPEQYMMNRILLM--HVKCGMIIDARRL 180
Query: 60 FEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHL 119
F++ E+++ ++ ++ISG+V G +A ++F M + + ++ A++ LG +
Sbjct: 181 FDEIPERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSI 240
Query: 120 ELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQG 179
+ + + K + + V L+DM +KCG+++ A F+ MP++ V++ ++I G
Sbjct: 241 YVGKQLHVCALKLGV-VDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAG 299
Query: 180 LSIHGCGEDAVRLFNSMLMEGLVPDEVAFTII-----------LTACSHSGLVDEGWNYF 228
++HG E+A+ L M G+ D+ +I+ LT +H+ L+ G F
Sbjct: 300 YALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNG---F 356
Query: 229 QSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHG 286
+S I + +VD S+ G + A + + + +W AL+G HG
Sbjct: 357 ES-----EIVAN----TALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHG 405
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 86/182 (47%), Gaps = 2/182 (1%)
Query: 108 SLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPK 167
+L+ A +L + + V ++ + + +Q +++ +L M+ KCG + A +LF E+P+
Sbjct: 128 ALVEACIRLKSIRCVKRVYGFMMSNGFEPEQ-YMMNRILLMHVKCGMIIDARRLFDEIPE 186
Query: 168 RDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNY 227
R+L SY S+I G G +A LF M E + F ++L A + G + G
Sbjct: 187 RNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYVG-KQ 245
Query: 228 FQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHGD 287
K G+ + ++D+ S+ G + DA + M E AW ++ LHG
Sbjct: 246 LHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALHGY 305
Query: 288 SD 289
S+
Sbjct: 306 SE 307
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 202 bits (513), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 103/305 (33%), Positives = 176/305 (57%), Gaps = 6/305 (1%)
Query: 42 TMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKP 101
T+I Y + D+ +A +F ++ ++ +W+ +IS QN + ++F ++ ++P
Sbjct: 621 TLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKAGREVFQLFRNLK---LEP 677
Query: 102 DEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKL 161
+E V L+SA++QLG ++ + V AAL+DM + CG ++ +K+
Sbjct: 678 NEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQ-ANPFVSAALVDMYSSCGMLETGMKV 736
Query: 162 FKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEG-LVPDEVAFTIILTACSHSGL 220
F+ + ++ S+I HG GE A+ LF + + P++ +F +L+ACSHSG
Sbjct: 737 FRNSGVNSISAWNSVISAHGFHGMGEKAMELFKELSSNSEMEPNKSSFISLLSACSHSGF 796
Query: 221 VDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPH-AGAWGALL 279
+DEG +Y++ M++K+G+ P +H +VD+L R+G L +AYE + + EP AG WGALL
Sbjct: 797 IDEGLSYYKQMEEKFGVKPVTEHRVWIVDMLGRAGKLREAYEFITGIGEPQKAGVWGALL 856
Query: 280 GACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQK 339
AC HGD+ LG+ VA LFE+EP NA+ YI L+N Y W + +R + + +++K
Sbjct: 857 SACNYHGDTKLGKEVAEVLFEMEPDNASYYISLANTYVGLGGWEEAVRLRKMVEDNALKK 916
Query: 340 IPGCS 344
+PG S
Sbjct: 917 LPGYS 921
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 161/343 (46%), Gaps = 40/343 (11%)
Query: 2 PQRNVASWNAMLCGFVKDGDLSSARGVF-DAMPEKNVVSFT---------------TMID 45
R++ SWN+M+ F ++G A+ +F + + E + F+ ++I
Sbjct: 456 THRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSCDSSDSLIF 515
Query: 46 GYA------KAGDMAAARFLFEQATE-KDVVAWSALISGYVQNGQPNQALKVFLEMESK- 97
G + K GD+ +A E +E +D+ +W+++ISG +G ++L+ F M +
Sbjct: 516 GKSVHCWLQKLGDLTSAFLRLETMSETRDLTSWNSVISGCASSGHHLESLRAFQAMSREG 575
Query: 98 NVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDR 157
++ D L+ +SA+ LG + + KS +L + L+ M +C +++
Sbjct: 576 KIRHDLITLLGTISASGNLGLVLQGRCFHGLAIKSLRELDT-QLQNTLITMYGRCKDIES 634
Query: 158 ALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSH 217
A+K+F + +L S+ +I LS + G + +LF ++ +E P+E+ F +L+A +
Sbjct: 635 AVKVFGLISDPNLCSWNCVISALSQNKAGREVFQLFRNLKLE---PNEITFVGLLSASTQ 691
Query: 218 SGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGA 277
G G + ++ G +P A +VD+ S G L ++ ++ AW +
Sbjct: 692 LGSTSYGMQAHCHLIRR-GFQANPFVSAALVDMYSSCGMLETGMKVFRNSGVNSISAWNS 750
Query: 278 LLGACKLHGDSDLGEIVANQLF-------ELEPQNAANYILLS 313
++ A HG +GE A +LF E+EP ++ LLS
Sbjct: 751 VISAHGFHG---MGE-KAMELFKELSSNSEMEPNKSSFISLLS 789
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 96/189 (50%), Gaps = 3/189 (1%)
Query: 33 PEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFL 92
PE +V ++I Y+K GD AA +FE+ +DV++ +A+++G+ NG +A +
Sbjct: 322 PEAHVSVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILN 381
Query: 93 EMES-KNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAK 151
+M+S ++PD +VS+ S L + V Y + + + VI +++DM K
Sbjct: 382 QMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGK 441
Query: 152 CGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTI- 210
CG +A LFK RDLVS+ SMI S +G A LF ++ E T+
Sbjct: 442 CGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVL 501
Query: 211 -ILTACSHS 218
ILT+C S
Sbjct: 502 AILTSCDSS 510
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 120/252 (47%), Gaps = 14/252 (5%)
Query: 43 MIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPD 102
+++ YAK ++++A +F +D+V+W+ +++ + NG P ++L+ F M + D
Sbjct: 229 LMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEAD 288
Query: 103 EFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIA--ALLDMNAKCGNMDRALK 160
++SA S + L L + + V KS + HV +++ M +KCG+ + A
Sbjct: 289 TVTFSCVISACSSIEELTLGESLHGLVIKSGYS-PEAHVSVGNSIISMYSKCGDTEAAET 347
Query: 161 LFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSML-MEGLVPDEVAFTIILTAC---- 215
+F+E+ RD++S +++ G + +G E+A + N M ++ + PD I + C
Sbjct: 348 VFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLS 407
Query: 216 -SHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGA 274
S G G+ M+ + + + ++D+ + G A L K+ +
Sbjct: 408 FSREGRAVHGYTVRMEMQSR-----ALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVS 462
Query: 275 WGALLGACKLHG 286
W +++ A +G
Sbjct: 463 WNSMISAFSQNG 474
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 96/182 (52%), Gaps = 1/182 (0%)
Query: 35 KNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEM 94
+++ + + ++ Y + G++ ++ LF++ EKDV+ W+++I+ QNG+ A+ +F+EM
Sbjct: 120 QDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNGRYIAAVGLFIEM 179
Query: 95 ESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGN 154
K + D L+ SA S L + ++ + + + AL+++ AK N
Sbjct: 180 IHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGL-VGDSSLCNALMNLYAKGEN 238
Query: 155 MDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTA 214
+ A +F M RD+VS+ +++ +G +++ F SM G D V F+ +++A
Sbjct: 239 LSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVISA 298
Query: 215 CS 216
CS
Sbjct: 299 CS 300
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 130/323 (40%), Gaps = 66/323 (20%)
Query: 4 RNVASWNAMLCGFVKDGDLSSARGVFDAMPE--------KNVVSFTTM------------ 43
R+V S NA+L GF +G A G+ + M VVS T++
Sbjct: 355 RDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRA 414
Query: 44 ---------------------IDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNG 82
ID Y K G A LF+ T +D+V+W+++IS + QNG
Sbjct: 415 VHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNG 474
Query: 83 QPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSID--LQQDH 140
++A +F E+ S+ S S ++ L L DS + S+ LQ
Sbjct: 475 FTHKAKNLFKEVVSEYS-------CSKFSLSTVLAILTSCDSSDSLIFGKSVHCWLQ--- 524
Query: 141 VIAALLDMNAKCGNMDRALKLFKEMPK-RDLVSYCSMIQGLSIHGCGEDAVRLFNSMLME 199
K G++ A + M + RDL S+ S+I G + G +++R F +M E
Sbjct: 525 ----------KLGDLTSAFLRLETMSETRDLTSWNSVISGCASSGHHLESLRAFQAMSRE 574
Query: 200 GLVP-DEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLG 258
G + D + ++A + GLV +G F + K ++ + R +
Sbjct: 575 GKIRHDLITLLGTISASGNLGLVLQG-RCFHGLAIKSLRELDTQLQNTLITMYGRCKDIE 633
Query: 259 DAYELMKSMHEPHAGAWGALLGA 281
A ++ + +P+ +W ++ A
Sbjct: 634 SAVKVFGLISDPNLCSWNCVISA 656
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 202 bits (513), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 103/259 (39%), Positives = 163/259 (62%), Gaps = 2/259 (0%)
Query: 10 NAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVV 69
N ++ + K G S R VFD MP +++VS+TTM+ G + +A +F Q ++VV
Sbjct: 158 NTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNVV 217
Query: 70 AWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYV 129
+W+A+I+ YV+N +P++A ++F M+ +VKP+EF +V+L+ A++QLG L + +WV Y
Sbjct: 218 SWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGRWVHDYA 277
Query: 130 SKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDA 189
K+ L + AL+DM +KCG++ A K+F M + L ++ SMI L +HGCGE+A
Sbjct: 278 HKNGFVLDC-FLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNSMITSLGVHGCGEEA 336
Query: 190 VRLFNSMLMEGLV-PDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMV 248
+ LF M E V PD + F +L+AC+++G V +G YF M Q YGISP +H ACM+
Sbjct: 337 LSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMIQVYGISPIREHNACMI 396
Query: 249 DLLSRSGHLGDAYELMKSM 267
LL ++ + A L++SM
Sbjct: 397 QLLEQALEVEKASNLVESM 415
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 96/217 (44%), Gaps = 10/217 (4%)
Query: 43 MIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVF-LEMESKNVKP 101
+I + G+ A +F Q W+ +I N +P +AL +F L M S +
Sbjct: 58 LISVSSSFGETQYASLVFNQLQSPSTFTWNLMIRSLSVNHKPREALLLFILMMISHQSQF 117
Query: 102 DEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKL 161
D+F ++ A + L V K+ L+D+ KCG D K+
Sbjct: 118 DKFTFPFVIKACLASSSIRLGTQVHGLAIKAGF-FNDVFFQNTLMDLYFKCGKPDSGRKV 176
Query: 162 FKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLV 221
F +MP R +VS+ +M+ GL + + A +FN M M + V++T ++TA +
Sbjct: 177 FDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNV----VSWTAMITAYVKNRRP 232
Query: 222 DEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLG 258
DE + F+ M+ P+ F +V+LL S LG
Sbjct: 233 DEAFQLFRRMQVD---DVKPNEFT-IVNLLQASTQLG 265
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 201 bits (511), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 122/383 (31%), Positives = 201/383 (52%), Gaps = 43/383 (11%)
Query: 4 RNVASWNAMLCGFVKDGDLSSARGVFDAM-PEKNV------------------------- 37
R++ WNA++ +V +G + A G+ M +KN
Sbjct: 206 RDLVLWNALVSSYVLNGMIDEAFGLLKLMGSDKNRFRGDYFTFSSLLSACRIEQGKQIHA 265
Query: 38 ----VSF-------TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQ 86
VS+ T +++ YAK+ ++ AR FE ++VV+W+A+I G+ QNG+ +
Sbjct: 266 ILFKVSYQFDIPVATALLNMYAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEGRE 325
Query: 87 ALKVFLEMESKNVKPDEFILVSLMSATSQLGHL-ELAQWVDSYVSKSSIDLQQDHVIAAL 145
A+++F +M +N++PDE S++S+ ++ + E+ Q K S D V +L
Sbjct: 326 AMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQVQAMVTKKGSADFLS--VANSL 383
Query: 146 LDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDE 205
+ ++ GN+ AL F + + DLVS+ S+I L+ HG E+++++F SML + L PD+
Sbjct: 384 ISSYSRNGNLSEALLCFHSIREPDLVSWTSVIGALASHGFAEESLQMFESML-QKLQPDK 442
Query: 206 VAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMK 265
+ F +L+ACSH GLV EG F+ M + Y I +H+ C++DLL R+G + +A +++
Sbjct: 443 ITFLEVLSACSHGGLVQEGLRCFKRMTEFYKIEAEDEHYTCLIDLLGRAGFIDEASDVLN 502
Query: 266 SM-HEPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWID 324
SM EP A A G C +H + + A +L E+EP NY +LSN Y + W
Sbjct: 503 SMPTEPSTHALAAFTGGCNIHEKRESMKWGAKKLLEIEPTKPVNYSILSNAYVSEGHWNQ 562
Query: 325 VSLVRSRMRERSVQ-KIPGCSKL 346
+L+R R R K PGCS L
Sbjct: 563 AALLRKRERRNCYNPKTPGCSWL 585
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 98/350 (28%), Positives = 168/350 (48%), Gaps = 53/350 (15%)
Query: 1 MPQRNVASWNAMLCGFV-KDGDLSS---------ARGVFDAMP----------------- 33
MP RN+ +WN ++ G + +DGD + +R +F +
Sbjct: 97 MPLRNIVTWNILIHGVIQRDGDTNHRAHLGFCYLSRILFTDVSLDHVSFMGLIRLCTDST 156
Query: 34 -----------------EKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALIS 76
E + T+++ Y K G + AR +FE ++D+V W+AL+S
Sbjct: 157 NMKAGIQLHCLMVKQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVS 216
Query: 77 GYVQNGQPNQALKVFLEMES-KN-VKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSI 134
YV NG ++A + M S KN + D F SL+SA +E + + + + K S
Sbjct: 217 SYVLNGMIDEAFGLLKLMGSDKNRFRGDYFTFSSLLSAC----RIEQGKQIHAILFKVSY 272
Query: 135 DLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFN 194
V ALL+M AK ++ A + F+ M R++VS+ +MI G + +G G +A+RLF
Sbjct: 273 QFDIP-VATALLNMYAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFG 331
Query: 195 SMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRS 254
ML+E L PDE+ F +L++C+ + E Q+M K G + ++ SR+
Sbjct: 332 QMLLENLQPDELTFASVLSSCAKFSAIWE-IKQVQAMVTKKGSADFLSVANSLISSYSRN 390
Query: 255 GHLGDAYELMKSMHEPHAGAWGALLGACKLHGDSDLG-EIVANQLFELEP 303
G+L +A S+ EP +W +++GA HG ++ ++ + L +L+P
Sbjct: 391 GNLSEALLCFHSIREPDLVSWTSVIGALASHGFAEESLQMFESMLQKLQP 440
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 90/206 (43%), Gaps = 42/206 (20%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNV----VSF---------------- 40
M RNV SWNAM+ GF ++G+ A +F M +N+ ++F
Sbjct: 302 MVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEI 361
Query: 41 -------------------TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQN 81
++I Y++ G+++ A F E D+V+W+++I +
Sbjct: 362 KQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSIREPDLVSWTSVIGALASH 421
Query: 82 GQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHL-ELAQWVDSYVSKSSIDLQQDH 140
G ++L++F M K ++PD+ + ++SA S G + E + I+ + +H
Sbjct: 422 GFAEESLQMFESMLQK-LQPDKITFLEVLSACSHGGLVQEGLRCFKRMTEFYKIEAEDEH 480
Query: 141 VIAALLDMNAKCGNMDRALKLFKEMP 166
L+D+ + G +D A + MP
Sbjct: 481 Y-TCLIDLLGRAGFIDEASDVLNSMP 505
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/270 (21%), Positives = 119/270 (44%), Gaps = 36/270 (13%)
Query: 26 RGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQ-NGQP 84
+G+++++ +N ++ Y K + A LF++ +++V W+ LI G +Q +G
Sbjct: 65 QGIYNSLFLQN-----KLLQAYTKIREFDDADKLFDEMPLRNIVTWNILIHGVIQRDGDT 119
Query: 85 NQALKVFLEMESK----NVKPDEFILVSL---------MSATSQLGHLELAQWVDSYVSK 131
N + S+ +V D + L M A QL L + Q ++S
Sbjct: 120 NHRAHLGFCYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQGLESSCFP 179
Query: 132 SSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVR 191
S+ +L+ KCG + A ++F+ + RDLV + +++ ++G ++A
Sbjct: 180 ST----------SLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFG 229
Query: 192 LFNSMLMEG--LVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVD 249
L M + D F+ +L+AC +++G ++ K +++
Sbjct: 230 LLKLMGSDKNRFRGDYFTFSSLLSACR----IEQG-KQIHAILFKVSYQFDIPVATALLN 284
Query: 250 LLSRSGHLGDAYELMKSMHEPHAGAWGALL 279
+ ++S HL DA E +SM + +W A++
Sbjct: 285 MYAKSNHLSDARECFESMVVRNVVSWNAMI 314
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 201 bits (510), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 120/384 (31%), Positives = 203/384 (52%), Gaps = 44/384 (11%)
Query: 4 RNVASWNAMLCGFVKDGDLSSARGVFDAMP----EKNVVSFTTMIDG--------YAKA- 50
+++ SWN+M+ GF K SA +F M E ++ ++T ++ + K+
Sbjct: 268 KDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSL 327
Query: 51 ----------------------------GDMAAARFLFEQATEKDVVAWSALISGYVQNG 82
G M A LFE KD+++W+++I+G+ Q G
Sbjct: 328 HGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKG 387
Query: 83 QPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVI 142
A+K F + S +K D++ +L+ + S L L+L Q + + +KS + + VI
Sbjct: 388 LSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGF-VSNEFVI 446
Query: 143 AALLDMNAKCGNMDRALKLFKEMP-KRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGL 201
++L+ M +KCG ++ A K F+++ K V++ +MI G + HG G+ ++ LF+ M + +
Sbjct: 447 SSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNV 506
Query: 202 VPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAY 261
D V FT ILTACSH+GL+ EG M+ Y I P +H+A VDLL R+G + A
Sbjct: 507 KLDHVTFTAILTACSHTGLIQEGLELLNLMEPVYKIQPRMEHYAAAVDLLGRAGLVNKAK 566
Query: 262 ELMKSMH-EPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAE 320
EL++SM P LG C+ G+ ++ VAN L E+EP++ Y+ LS++Y+ +
Sbjct: 567 ELIESMPLNPDPMVLKTFLGVCRACGEIEMATQVANHLLEIEPEDHFTYVSLSHMYSDLK 626
Query: 321 RWIDVSLVRSRMRERSVQKIPGCS 344
+W + + V+ M+ER V+K+PG S
Sbjct: 627 KWEEKASVKKMMKERGVKKVPGWS 650
Score = 101 bits (251), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 83/363 (22%), Positives = 162/363 (44%), Gaps = 50/363 (13%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSF-------------------- 40
+ + N SWNA++ GFV+ D+ +A + M K V+
Sbjct: 162 ISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMFCNL 221
Query: 41 --------------------TTMIDGYAKAGDMAAARFLFEQ-ATEKDVVAWSALISGYV 79
MI YA G ++ A+ +F+ KD+++W+++I+G+
Sbjct: 222 LKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFS 281
Query: 80 QNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQD 139
++ A ++F++M+ V+ D + L+SA S H + + V K ++ Q
Sbjct: 282 KHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLE-QVT 340
Query: 140 HVIAALLDMNAK--CGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSML 197
AL+ M + G M+ AL LF+ + +DL+S+ S+I G + G EDAV+ F+ +
Sbjct: 341 SATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLR 400
Query: 198 MEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHL 257
+ D+ AF+ +L +CS + G ++ K G + + ++ + S+ G +
Sbjct: 401 SSEIKVDDYAFSALLRSCSDLATLQLG-QQIHALATKSGFVSNEFVISSLIVMYSKCGII 459
Query: 258 GDAYELMKSMHEPHAG-AWGALLGACKLHGDSDLGEIVANQLFELEPQNAA-NYILLSNI 315
A + + + H+ AW A++ HG LG++ + ++ QN +++ + I
Sbjct: 460 ESARKCFQQISSKHSTVAWNAMILGYAQHG---LGQVSLDLFSQMCNQNVKLDHVTFTAI 516
Query: 316 YAA 318
A
Sbjct: 517 LTA 519
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 133/323 (41%), Gaps = 47/323 (14%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMP--------------------------- 33
MP+R+ SWN M+ G+ G L A +F M
Sbjct: 61 MPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLG 120
Query: 34 ------------EKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQN 81
E NV ++++D YAK + A F++ +E + V+W+ALI+G+VQ
Sbjct: 121 EQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQV 180
Query: 82 GQPNQALKVFLEMESK-NVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDH 140
A + ME K V D L++ L + V + V K + LQ +
Sbjct: 181 RDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLK--LGLQHEI 238
Query: 141 VIA-ALLDMNAKCGNMDRALKLFKEM-PKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLM 198
I A++ A CG++ A ++F + +DL+S+ SMI G S H E A LF M
Sbjct: 239 TICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQR 298
Query: 199 EGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSR--SGH 256
+ D +T +L+ACS G M K G+ ++ + + +G
Sbjct: 299 HWVETDIYTYTGLLSACSGEEHQIFG-KSLHGMVIKKGLEQVTSATNALISMYIQFPTGT 357
Query: 257 LGDAYELMKSMHEPHAGAWGALL 279
+ DA L +S+ +W +++
Sbjct: 358 MEDALSLFESLKSKDLISWNSII 380
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 72/138 (52%), Gaps = 1/138 (0%)
Query: 43 MIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPD 102
++D Y K G + A LF++ ++D V+W+ +ISGY G+ A +F M+ D
Sbjct: 41 ILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMKRSGSDVD 100
Query: 103 EFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLF 162
+ L+ + + +L + V V K + +V ++L+DM AKC ++ A + F
Sbjct: 101 GYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNV-YVGSSLVDMYAKCERVEDAFEAF 159
Query: 163 KEMPKRDLVSYCSMIQGL 180
KE+ + + VS+ ++I G
Sbjct: 160 KEISEPNSVSWNALIAGF 177
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 69/142 (48%), Gaps = 1/142 (0%)
Query: 140 HVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLME 199
+V +LD K G + A LF EMPKRD VS+ +MI G + G EDA LF M
Sbjct: 36 YVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMKRS 95
Query: 200 GLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGD 259
G D +F+ +L + D G + K G + + +VD+ ++ + D
Sbjct: 96 GSDVDGYSFSRLLKGIASVKRFDLG-EQVHGLVIKGGYECNVYVGSSLVDMYAKCERVED 154
Query: 260 AYELMKSMHEPHAGAWGALLGA 281
A+E K + EP++ +W AL+
Sbjct: 155 AFEAFKEISEPNSVSWNALIAG 176
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 199 bits (507), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 105/304 (34%), Positives = 182/304 (59%), Gaps = 3/304 (0%)
Query: 43 MIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPD 102
+++ Y++ +A+A +F +E D+VA S+LI+GY + G +AL +F E+ KPD
Sbjct: 248 LVNMYSRCMCIASACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPD 307
Query: 103 EFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLF 162
++ ++ + ++L + V SYV + ++L V +AL+DM +KCG + A+ LF
Sbjct: 308 CVLVAIVLGSCAELSDSVSGKEVHSYVIRLGLELDIK-VCSALIDMYSKCGLLKCAMSLF 366
Query: 163 KEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVD 222
+P++++VS+ S+I GL +HG A F +L GL+PDE+ F+ +L C HSGL++
Sbjct: 367 AGIPEKNIVSFNSLILGLGLHGFASTAFEKFTEILEMGLIPDEITFSALLCTCCHSGLLN 426
Query: 223 EGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEP-HAGAWGALLGA 281
+G F+ MK ++GI P +H+ MV L+ +G L +A+E + S+ +P +G GALL
Sbjct: 427 KGQEIFERMKSEFGIEPQTEHYVYMVKLMGMAGKLEEAFEFVMSLQKPIDSGILGALLSC 486
Query: 282 CKLHGDSDLGEIVANQLFELEPQNAANY-ILLSNIYAAAERWIDVSLVRSRMRERSVQKI 340
C++H ++ L E+VA + + + + Y ++LSN+YA RW +V +R + E K+
Sbjct: 487 CEVHENTHLAEVVAENIHKNGEERRSVYKVMLSNVYARYGRWDEVERLRDGISESYGGKL 546
Query: 341 PGCS 344
PG S
Sbjct: 547 PGIS 550
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 120/246 (48%), Gaps = 2/246 (0%)
Query: 41 TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVK 100
+ ++ Y+KAG + A LF + D+ W+ +I GY G ++ + +F M+ + +
Sbjct: 145 SAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQHRGHQ 204
Query: 101 PDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALK 160
P+ + +V+L S L +A V ++ K ++D +V AL++M ++C + A
Sbjct: 205 PNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLD-SHSYVGCALVNMYSRCMCIASACS 263
Query: 161 LFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGL 220
+F + + DLV+ S+I G S G ++A+ LF + M G PD V I+L +C+
Sbjct: 264 VFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSCAELSD 323
Query: 221 VDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLG 280
G S + G+ + ++D+ S+ G L A L + E + ++ +L+
Sbjct: 324 SVSG-KEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSFNSLIL 382
Query: 281 ACKLHG 286
LHG
Sbjct: 383 GLGLHG 388
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 104/243 (42%), Gaps = 10/243 (4%)
Query: 41 TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVK 100
T + YA D+ +AR LF+ E+ V W+++I Y + Q L +F ++ + +
Sbjct: 44 TQLARFYALNDDLISARKLFDVFPERSVFLWNSIIRAYAKAHQFTTVLSLFSQILRSDTR 103
Query: 101 PDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALK 160
PD F L S+ + + + S + Q +A++ +K G + A K
Sbjct: 104 PDNFTYACLARGFSESFDTKGLRCIHGIAIVSGLGFDQI-CGSAIVKAYSKAGLIVEASK 162
Query: 161 LFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGL 220
LF +P DL + MI G G + + LFN M G P+ +T++ SGL
Sbjct: 163 LFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQHRGHQPN--CYTMVALT---SGL 217
Query: 221 VDEGWNYFQSMKQKYGISPSPD---HFAC-MVDLLSRSGHLGDAYELMKSMHEPHAGAWG 276
+D + + + D + C +V++ SR + A + S+ EP A
Sbjct: 218 IDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIASACSVFNSISEPDLVACS 277
Query: 277 ALL 279
+L+
Sbjct: 278 SLI 280
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 65/135 (48%), Gaps = 2/135 (1%)
Query: 34 EKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLE 93
E ++ + +ID Y+K G + A LF EK++V++++LI G +G + A + F E
Sbjct: 340 ELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSFNSLILGLGLHGFASTAFEKFTE 399
Query: 94 MESKNVKPDEFILVSLMSATSQLGHLELAQWV-DSYVSKSSIDLQQDHVIAALLDMNAKC 152
+ + PDE +L+ G L Q + + S+ I+ Q +H + ++ +
Sbjct: 400 ILEMGLIPDEITFSALLCTCCHSGLLNKGQEIFERMKSEFGIEPQTEHYV-YMVKLMGMA 458
Query: 153 GNMDRALKLFKEMPK 167
G ++ A + + K
Sbjct: 459 GKLEEAFEFVMSLQK 473
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 199 bits (506), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 117/389 (30%), Positives = 203/389 (52%), Gaps = 46/389 (11%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEK----------------------NVV 38
M +R++ SWNAM+ G+ + ++ +F M + +V
Sbjct: 174 MKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIV 233
Query: 39 S-----------------FTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQ- 80
S ++++ Y K G +A A L E ++D+++ +ALI+G+ Q
Sbjct: 234 SELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQ 293
Query: 81 NGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDH 140
N + A +F +M K DE ++ S++ + + + + + + + KSS ++ D
Sbjct: 294 NNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSS-QIRFDV 352
Query: 141 VIA-ALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLME 199
+ +L+DM AK G ++ A+ F+EM ++D+ S+ S+I G HG E A+ L+N M E
Sbjct: 353 ALGNSLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHE 412
Query: 200 GLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGD 259
+ P++V F +L+ACSH+G + GW + +M K+GI +H +C++D+L+RSG+L +
Sbjct: 413 RIKPNDVTFLSLLSACSHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEE 472
Query: 260 AYELMKSMH---EPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIY 316
AY L++S + WGA L AC+ HG+ L ++ A QL +EP+ NYI L+++Y
Sbjct: 473 AYALIRSKEGIVSLSSSTWGAFLDACRRHGNVQLSKVAATQLLSMEPRKPVNYINLASVY 532
Query: 317 AAAERWIDVSLVRSRMRER-SVQKIPGCS 344
AA W + R M+E S K PG S
Sbjct: 533 AANGAWDNALNTRKLMKESGSCNKAPGYS 561
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/223 (33%), Positives = 118/223 (52%), Gaps = 6/223 (2%)
Query: 43 MIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPD 102
+ID Y K GD+ AR LF++ +++DVV+W+A+IS + + G AL +F EM ++VK +
Sbjct: 53 LIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVKAN 112
Query: 103 EFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLF 162
+F S++ + LG L+ + V K + V +ALL + A+CG M+ A F
Sbjct: 113 QFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNC-AGNLIVRSALLSLYARCGKMEEARLQF 171
Query: 163 KEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVD 222
M +RDLVS+ +MI G + + C + + LF ML EG PD F +L A S +V
Sbjct: 172 DSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRA---SIVVK 228
Query: 223 --EGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYEL 263
E + + K G S +V+ + G L +A++L
Sbjct: 229 CLEIVSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKL 271
Score = 105 bits (261), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 123/260 (47%), Gaps = 16/260 (6%)
Query: 36 NVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEME 95
N++ + ++ YA+ G M AR F+ E+D+V+W+A+I GY N + + +F M
Sbjct: 147 NLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLML 206
Query: 96 SKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNM 155
++ KPD F SL+ A+ + LE+ + K + +I +L++ KCG++
Sbjct: 207 TEGKKPDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFG-RSSALIRSLVNAYVKCGSL 265
Query: 156 DRALKLFKEMPKRDLVSYCSMIQGLS-IHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTA 214
A KL + KRDL+S ++I G S + C DA +F M+ DEV + +L
Sbjct: 266 ANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKI 325
Query: 215 CSHSGLVDEGWNYFQSMKQKYGISPSPDHFA-------CMVDLLSRSGHLGDAYELMKSM 267
C+ V G +Q +G + ++D+ ++SG + DA + M
Sbjct: 326 CTTIASVTIG-------RQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEM 378
Query: 268 HEPHAGAWGALLGACKLHGD 287
E +W +L+ HG+
Sbjct: 379 KEKDVRSWTSLIAGYGRHGN 398
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 199 bits (505), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 103/307 (33%), Positives = 174/307 (56%), Gaps = 2/307 (0%)
Query: 41 TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVK 100
+ ++D Y+K G + A +FE TE D V+ + ++ G QNG +A++ F+ M V+
Sbjct: 295 SALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVE 354
Query: 101 PDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALK 160
D ++ +++ + L L + + S V K V L++M +KCG++ +
Sbjct: 355 IDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFS-GNTFVNNGLINMYSKCGDLTDSQT 413
Query: 161 LFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGL 220
+F+ MPKR+ VS+ SMI + HG G A++L+ M + P +V F +L ACSH GL
Sbjct: 414 VFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVGL 473
Query: 221 VDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMH-EPHAGAWGALL 279
+D+G MK+ +GI P +H+ C++D+L R+G L +A + S+ +P W ALL
Sbjct: 474 IDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQALL 533
Query: 280 GACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQK 339
GAC HGD+++GE A QLF+ P +++ +IL++NIY++ +W + + RM+ V K
Sbjct: 534 GACSFHGDTEVGEYAAEQLFQTAPDSSSAHILIANIYSSRGKWKERAKTIKRMKAMGVTK 593
Query: 340 IPGCSKL 346
G S +
Sbjct: 594 ETGISSI 600
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/324 (22%), Positives = 142/324 (43%), Gaps = 40/324 (12%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSA---------RGVFDA-----------MPE------ 34
MP R+V S N + GF+++ + S G FD PE
Sbjct: 116 MPMRDVISQNIVFYGFLRNRETESGFVLLKRMLGSGGFDHATLTIVLSVCDTPEFCLVTK 175
Query: 35 ------------KNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNG 82
K + +I Y K G + R +F+ + ++V+ +A+ISG ++N
Sbjct: 176 MIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRGVFDGMSHRNVITLTAVISGLIENE 235
Query: 83 QPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVI 142
L++F M V P+ +S ++A S + Q + + + K I+ + +
Sbjct: 236 LHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIE-SELCIE 294
Query: 143 AALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLV 202
+AL+DM +KCG+++ A +F+ + D VS ++ GL+ +G E+A++ F ML G+
Sbjct: 295 SALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVE 354
Query: 203 PDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYE 262
D + +L + G S+ K S + ++++ S+ G L D+
Sbjct: 355 IDANVVSAVLGVSFIDNSLGLG-KQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQT 413
Query: 263 LMKSMHEPHAGAWGALLGACKLHG 286
+ + M + + +W +++ A HG
Sbjct: 414 VFRRMPKRNYVSWNSMIAAFARHG 437
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 116/242 (47%), Gaps = 6/242 (2%)
Query: 30 DAMPEKN-VVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQAL 88
DA +N +V + +++ YAK G + A LF++ +DV++ + + G+++N +
Sbjct: 82 DADIHRNALVVWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGF 141
Query: 89 KVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDM 148
V L+ + D L ++S + + + + S D ++ V L+
Sbjct: 142 -VLLKRMLGSGGFDHATLTIVLSVCDTPEFCLVTKMIHALAILSGYD-KEISVGNKLITS 199
Query: 149 NAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLV-PDEVA 207
KCG +F M R++++ ++I GL + ED +RLF S++ GLV P+ V
Sbjct: 200 YFKCGCSVSGRGVFDGMSHRNVITLTAVISGLIENELHEDGLRLF-SLMRRGLVHPNSVT 258
Query: 208 FTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSM 267
+ L ACS S + EG ++ KYGI + ++D+ S+ G + DA+ + +S
Sbjct: 259 YLSALAACSGSQRIVEG-QQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFEST 317
Query: 268 HE 269
E
Sbjct: 318 TE 319
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 198 bits (504), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 101/307 (32%), Positives = 182/307 (59%), Gaps = 10/307 (3%)
Query: 41 TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVK 100
T+++ Y+ G + A +F++ +D+V+W+ +I + G NQAL ++ M ++ V
Sbjct: 146 TSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQALSMYKRMGNEGVC 205
Query: 101 PDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVI---AALLDMNAKCGNMDR 157
D + LV+L+S+ + + L + + + + D++ + + AL+DM AKCG+++
Sbjct: 206 GDSYTLVALLSSCAHVSALNMGVMLH----RIACDIRCESCVFVSNALIDMYAKCGSLEN 261
Query: 158 ALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSH 217
A+ +F M KRD++++ SMI G +HG G +A+ F M+ G+ P+ + F +L CSH
Sbjct: 262 AIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAITFLGLLLGCSH 321
Query: 218 SGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELM--KSMHEPHAGAW 275
GLV EG +F+ M ++ ++P+ H+ CMVDL R+G L ++ E++ S HE W
Sbjct: 322 QGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEMIYASSCHEDPV-LW 380
Query: 276 GALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRER 335
LLG+CK+H + +LGE+ +L +LE NA +Y+L+++IY+AA + +R +R
Sbjct: 381 RTLLGSCKIHRNLELGEVAMKKLVQLEAFNAGDYVLMTSIYSAANDAQAFASMRKLIRSH 440
Query: 336 SVQKIPG 342
+Q +PG
Sbjct: 441 DLQTVPG 447
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 108/245 (44%), Gaps = 16/245 (6%)
Query: 50 AGDMAAARFLFEQA-TEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNV-KPDEFILV 107
G ++ A+ LF+ ++ W+ LI G+ + P ++ + M +V +PD F
Sbjct: 52 TGSLSHAQLLFDHFDSDPSTSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFN 111
Query: 108 SLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPK 167
+ + ++ + + V +S L V +L+ + G+++ A K+F EMP
Sbjct: 112 FALKSCERIKSIPKCLEIHGSVIRSGF-LDDAIVATSLVRCYSANGSVEIASKVFDEMPV 170
Query: 168 RDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNY 227
RDLVS+ MI S G A+ ++ M EG+ D +L++C+H ++ G
Sbjct: 171 RDLVSWNVMICCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMG--- 227
Query: 228 FQSMKQKYGISPSPDHFAC------MVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGA 281
M + + +C ++D+ ++ G L +A + M + W +++
Sbjct: 228 --VMLHRIACDIRCE--SCVFVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIG 283
Query: 282 CKLHG 286
+HG
Sbjct: 284 YGVHG 288
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 93/224 (41%), Gaps = 42/224 (18%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVV--SFT----------------- 41
MP R++ SWN M+C F G + A ++ M + V S+T
Sbjct: 168 MPVRDLVSWNVMICCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMG 227
Query: 42 --------------------TMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQN 81
+ID YAK G + A +F ++DV+ W+++I GY +
Sbjct: 228 VMLHRIACDIRCESCVFVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVH 287
Query: 82 GQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHL-ELAQWVDSYVSKSSIDLQQDH 140
G +A+ F +M + V+P+ + L+ S G + E + + S+ + H
Sbjct: 288 GHGVEAISFFRKMVASGVRPNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKH 347
Query: 141 VIAALLDMNAKCGNMDRALK-LFKEMPKRDLVSYCSMIQGLSIH 183
++D+ + G ++ +L+ ++ D V + +++ IH
Sbjct: 348 Y-GCMVDLYGRAGQLENSLEMIYASSCHEDPVLWRTLLGSCKIH 390
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 198 bits (504), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 123/328 (37%), Positives = 190/328 (57%), Gaps = 8/328 (2%)
Query: 24 SARGVFDAMPE-KNVVSFTTMIDGYAKAGDMAAARFLFE----QATEKDVVAWSALISGY 78
SA VF + + +N++S+ ++I G G A LFE + + D W++LISG+
Sbjct: 284 SAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGF 343
Query: 79 VQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQ 138
Q G+ +A K F M S + P L SL+SA S + L+ + + +V K++ + +
Sbjct: 344 SQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLKNGKEIHGHVIKAAAE-RD 402
Query: 139 DHVIAALLDMNAKCGNMDRALKLFKEM-PK-RDLVSYCSMIQGLSIHGCGEDAVRLFNSM 196
V+ +L+DM KCG A ++F PK +D V + MI G HG E A+ +F +
Sbjct: 403 IFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMISGYGKHGECESAIEIFELL 462
Query: 197 LMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGH 256
E + P FT +L+ACSH G V++G F+ M+++YG PS +H CM+DLL RSG
Sbjct: 463 REEKVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQEEYGYKPSTEHIGCMIDLLGRSGR 522
Query: 257 LGDAYELMKSMHEPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIY 316
L +A E++ M EP + + +LLG+C+ H D LGE A +L ELEP+N A +++LS+IY
Sbjct: 523 LREAKEVIDQMSEPSSSVYSSLLGSCRQHLDPVLGEEAAMKLAELEPENPAPFVILSSIY 582
Query: 317 AAAERWIDVSLVRSRMRERSVQKIPGCS 344
AA ERW DV +R + ++ + K+PG S
Sbjct: 583 AALERWEDVESIRQVIDQKQLVKLPGLS 610
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 134/290 (46%), Gaps = 43/290 (14%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFD------------------------------ 30
MP+R +AS NA + G +++G A +F
Sbjct: 92 MPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGCGDIEGGMQL 151
Query: 31 ---AMP---EKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQP 84
AM E V T+++ Y++ G+ A +FE+ K VV ++A ISG ++NG
Sbjct: 152 HCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLMENGVM 211
Query: 85 NQALKVF-LEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIA 143
N VF L + + +P++ V+ ++A + L +L+ + + V K + V
Sbjct: 212 NLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFET-MVGT 270
Query: 144 ALLDMNAKCGNMDRALKLFKEMP-KRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLV 202
AL+DM +KC A +F E+ R+L+S+ S+I G+ I+G E AV LF + EGL
Sbjct: 271 ALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKLDSEGLK 330
Query: 203 PDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLS 252
PD + +++ S G V E + +F+ M + PS C+ LLS
Sbjct: 331 PDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMV-PS---LKCLTSLLS 376
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 88/182 (48%), Gaps = 5/182 (2%)
Query: 36 NVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEME 95
+V + T ++ Y K + A + ++ E+ + + +A +SG ++NG A ++F +
Sbjct: 65 DVFTATALVSMYMKVKQVTDALKVLDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDAR 124
Query: 96 SKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNM 155
+ + S++ G +E + KS +++ +V +L+ M ++CG
Sbjct: 125 VSGSGMNSVTVASVLGGC---GDIEGGMQLHCLAMKSGFEMEV-YVGTSLVSMYSRCGEW 180
Query: 156 DRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSML-MEGLVPDEVAFTIILTA 214
A ++F+++P + +V+Y + I GL +G +FN M P++V F +TA
Sbjct: 181 VLAARMFEKVPHKSVVTYNAFISGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITA 240
Query: 215 CS 216
C+
Sbjct: 241 CA 242
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 87/219 (39%), Gaps = 5/219 (2%)
Query: 101 PDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALK 160
P++F L+ + ++LG + + + + V K+ + AL+ M K + ALK
Sbjct: 29 PNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDV-FTATALVSMYMKVKQVTDALK 87
Query: 161 LFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGL 220
+ EMP+R + S + + GL +G DA R+F + G + V +L C
Sbjct: 88 VLDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGCGDI-- 145
Query: 221 VDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLG 280
EG + K G +V + SR G A + + + + A +
Sbjct: 146 --EGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFIS 203
Query: 281 ACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAA 319
+G +L V N + + + + ++ I A A
Sbjct: 204 GLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACA 242
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 197 bits (502), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 124/385 (32%), Positives = 187/385 (48%), Gaps = 77/385 (20%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKN--VVSFT----------------- 41
M +V SWN+M+ G V+ G + A +F M E++ + FT
Sbjct: 288 MEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSILNCFALSRTEMKI 347
Query: 42 ---------------------TMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQ 80
++D YAK G M +A +FE EKDV++W+AL++G
Sbjct: 348 ASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTH 407
Query: 81 NGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDH 140
NG ++ALK+F M + PD+ + S++SA+++L LE Q V KS
Sbjct: 408 NGSYDEALKLFCNMRVGGITPDKIVTASVLSASAELTLLEFGQQVHGNYIKSGFP-SSLS 466
Query: 141 VIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEG 200
V +L+ M KCG++ EDA +FNSM
Sbjct: 467 VNNSLVTMYTKCGSL-------------------------------EDANVIFNSME--- 492
Query: 201 LVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDA 260
+ D + +T ++ + +GL+++ YF SM+ YGI+P P+H+ACM+DL RSG
Sbjct: 493 -IRDLITWTCLIVGYAKNGLLEDAQRYFDSMRTVYGITPGPEHYACMIDLFGRSGDFVKV 551
Query: 261 YELMKSMH-EPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAA 319
+L+ M EP A W A+L A + HG+ + GE A L ELEP NA Y+ LSN+Y+AA
Sbjct: 552 EQLLHQMEVEPDATVWKAILAASRKHGNIENGERAAKTLMELEPNNAVPYVQLSNMYSAA 611
Query: 320 ERWIDVSLVRSRMRERSVQKIPGCS 344
R + + VR M+ R++ K PGCS
Sbjct: 612 GRQDEAANVRRLMKSRNISKEPGCS 636
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 140/278 (50%), Gaps = 3/278 (1%)
Query: 10 NAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVV 69
N +L K G + AR +FD MPE++ ++ TMI Y+ + ++ A LF K+ +
Sbjct: 32 NLLLGDLSKSGRVDEARQMFDKMPERDEFTWNTMIVAYSNSRRLSDAEKLFRSNPVKNTI 91
Query: 70 AWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYV 129
+W+ALISGY ++G +A +F EM+S +KP+E+ L S++ + L L + + +
Sbjct: 92 SWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHT 151
Query: 130 SKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMP-KRDLVSYCSMIQGLSIHGCGED 188
K+ DL + V+ LL M A+C + A LF+ M +++ V++ SM+ G S +G
Sbjct: 152 IKTGFDLDVN-VVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFK 210
Query: 189 AVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMV 248
A+ F + EG ++ F +LTAC+ G + K G + + ++
Sbjct: 211 AIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCI-VKSGFKTNIYVQSALI 269
Query: 249 DLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHG 286
D+ ++ + A L++ M +W +++ C G
Sbjct: 270 DMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQG 307
Score = 107 bits (268), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 135/251 (53%), Gaps = 11/251 (4%)
Query: 34 EKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLE 93
+ N+ + +ID YAK +M +AR L E DVV+W+++I G V+ G +AL +F
Sbjct: 259 KTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGR 318
Query: 94 MESKNVKPDEFILVSLMSATS-QLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKC 152
M +++K D+F + S+++ + +++A + K+ + V AL+DM AK
Sbjct: 319 MHERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATYK-LVNNALVDMYAKR 377
Query: 153 GNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIIL 212
G MD ALK+F+ M ++D++S+ +++ G + +G ++A++LF +M + G+ PD++ +L
Sbjct: 378 GIMDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTASVL 437
Query: 213 TACSHSGLVDEGW----NYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMH 268
+A + L++ G NY +S G S +V + ++ G L DA + SM
Sbjct: 438 SASAELTLLEFGQQVHGNYIKS-----GFPSSLSVNNSLVTMYTKCGSLEDANVIFNSME 492
Query: 269 EPHAGAWGALL 279
W L+
Sbjct: 493 IRDLITWTCLI 503
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 197 bits (500), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 119/386 (30%), Positives = 194/386 (50%), Gaps = 43/386 (11%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEK------------------------- 35
M ++++ +W +++ G K+G A VF M +
Sbjct: 434 MEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALR 493
Query: 36 ----------------NVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYV 79
NV +++ID Y+K G A +F + +++VAW+++IS Y
Sbjct: 494 FGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYS 553
Query: 80 QNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQD 139
+N P ++ +F M S+ + PD + S++ A S L + + Y + I
Sbjct: 554 RNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIP-SDT 612
Query: 140 HVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLME 199
H+ AL+DM KCG A +FK+M + L+++ MI G HG A+ LF+ M
Sbjct: 613 HLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKA 672
Query: 200 GLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGD 259
G PD+V F +++AC+HSG V+EG N F+ MKQ YGI P+ +H+A MVDLL R+G L +
Sbjct: 673 GESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEE 732
Query: 260 AYELMKSMH-EPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAA 318
AY +K+M E + W LL A + H + +LG + A +L +EP+ + Y+ L N+Y
Sbjct: 733 AYSFIKAMPIEADSSIWLCLLSASRTHHNVELGILSAEKLLRMEPERGSTYVQLINLYME 792
Query: 319 AERWIDVSLVRSRMRERSVQKIPGCS 344
A + + + M+E+ + K PGCS
Sbjct: 793 AGLKNEAAKLLGLMKEKGLHKQPGCS 818
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 122/241 (50%), Gaps = 4/241 (1%)
Query: 41 TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVK 100
T+++ Y+K G + A +F +K + W+A+++ Y +N AL +F M K+V
Sbjct: 311 TSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVL 370
Query: 101 PDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALK 160
PD F L +++S S LG + V + + K I + +ALL + +KCG A
Sbjct: 371 PDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQ-STSTIESALLTLYSKCGCDPDAYL 429
Query: 161 LFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSML--MEGLVPDEVAFTIILTACSHS 218
+FK M ++D+V++ S+I GL +G ++A+++F M + L PD T + AC+
Sbjct: 430 VFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGL 489
Query: 219 GLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGAL 278
+ G SM K G+ + + ++DL S+ G A ++ SM + AW ++
Sbjct: 490 EALRFGLQVHGSM-IKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSM 548
Query: 279 L 279
+
Sbjct: 549 I 549
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 120/249 (48%), Gaps = 12/249 (4%)
Query: 41 TTMIDGYAKAG-DMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNV 99
T +ID Y K G + A R E + +VV W+ +I G+ +G +L +++ ++ +V
Sbjct: 209 TALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSV 268
Query: 100 KPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQD-HVIAALLDMNAKCGNMDRA 158
K + A SQ + + + V K + L D +V +LL M +KCG + A
Sbjct: 269 KLVSTSFTGALGACSQSENSGFGRQIHCDVVK--MGLHNDPYVCTSLLSMYSKCGMVGEA 326
Query: 159 LKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHS 218
+F + + L + +M+ + + G A+ LF M + ++PD + +++ CS
Sbjct: 327 ETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVL 386
Query: 219 GLVDEGWNYFQSMKQ---KYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAW 275
GL +NY +S+ K I + + ++ L S+ G DAY + KSM E AW
Sbjct: 387 GL----YNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAW 442
Query: 276 GALL-GACK 283
G+L+ G CK
Sbjct: 443 GSLISGLCK 451
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 120/264 (45%), Gaps = 21/264 (7%)
Query: 41 TTMIDGYAKAGDMAAARFLFEQ-------ATEKDVVAWSALISGYVQNGQPNQALKVFLE 93
T++++ Y K G + A +F+ + +DV W+++I GY + + + + F
Sbjct: 99 TSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRR 158
Query: 94 MESKNVKPDEFILVSLMSATSQLGHL--ELAQWVDSYVSKSSIDLQQDHVIAALLDMNAK 151
M V+PD F L ++S + G+ E + + ++ ++S+D + AL+DM K
Sbjct: 159 MLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLD-TDSFLKTALIDMYFK 217
Query: 152 CGNMDRALKLFKEMP-KRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTI 210
G A ++F E+ K ++V + MI G G E ++ L+ + +FT
Sbjct: 218 FGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTG 277
Query: 211 ILTACSHSGLVDEGWNYFQSMK---QKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSM 267
L ACS S E + + + K G+ P ++ + S+ G +G+A + +
Sbjct: 278 ALGACSQS----ENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCV 333
Query: 268 HEPHAGAWGALLGACKLHGDSDLG 291
+ W A++ A + ++D G
Sbjct: 334 VDKRLEIWNAMVAA---YAENDYG 354
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 196 bits (499), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 102/307 (33%), Positives = 183/307 (59%), Gaps = 6/307 (1%)
Query: 41 TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVK 100
++++ Y +G++ A +FE+ E++VV+W+A+ISG+ Q + + LK++ +M
Sbjct: 159 SSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSD 218
Query: 101 PDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQD-HVIAALLDMNAKCGNMDRAL 159
P+++ +L+SA + G L Q + + L+ H+ +L+ M KCG++ A
Sbjct: 219 PNDYTFTALLSACTGSG--ALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAF 276
Query: 160 KLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSML-MEGLVPDEVAFTIILTACSHS 218
++F + +D+VS+ SMI G + HG A+ LF M+ G PD + + +L++C H+
Sbjct: 277 RIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHA 336
Query: 219 GLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSM-HEPHAGAWGA 277
GLV EG +F M + +G+ P +H++C+VDLL R G L +A EL+++M +P++ WG+
Sbjct: 337 GLVKEGRKFFNLMAE-HGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGS 395
Query: 278 LLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSV 337
LL +C++HGD G A + LEP AA ++ L+N+YA+ W + + VR M+++ +
Sbjct: 396 LLFSCRVHGDVWTGIRAAEERLMLEPDCAATHVQLANLYASVGYWKEAATVRKLMKDKGL 455
Query: 338 QKIPGCS 344
+ PGCS
Sbjct: 456 KTNPGCS 462
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 128/283 (45%), Gaps = 46/283 (16%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAM----PEKNVVSFT--------------- 41
MP+RNV SW AM+ GF ++ + ++ M + N +FT
Sbjct: 181 MPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQG 240
Query: 42 --------------------TMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQN 81
++I Y K GD+ A +F+Q + KDVV+W+++I+GY Q+
Sbjct: 241 RSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQH 300
Query: 82 GQPNQALKVF-LEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDH 140
G QA+++F L M KPD + ++S+ G ++ + + +++ + + +H
Sbjct: 301 GLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKPELNH 360
Query: 141 VIAALLDMNAKCGNMDRALKLFKEMP-KRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLME 199
+ L+D+ + G + AL+L + MP K + V + S++ +HG +R LM
Sbjct: 361 Y-SCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVHGDVWTGIRAAEERLM- 418
Query: 200 GLVPDEVAFTIILTACSHS-GLVDEGWNYFQSMKQKYGISPSP 241
L PD A + L S G E + MK K G+ +P
Sbjct: 419 -LEPDCAATHVQLANLYASVGYWKEAATVRKLMKDK-GLKTNP 459
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 196 bits (499), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 109/339 (32%), Positives = 189/339 (55%), Gaps = 7/339 (2%)
Query: 10 NAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVV 69
N+++ + G L A+ +F +P++++VS+ ++I G + GD+ AA LF++ +K+++
Sbjct: 157 NSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNII 216
Query: 70 AWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYV 129
+W+ +IS Y+ P ++ +F EM + +E LV L++A + L+ + V + +
Sbjct: 217 SWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASL 276
Query: 130 SKSSIDLQQDHVI-AALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGED 188
++ L VI AL+DM KC + A ++F + R+ V++ MI +HG E
Sbjct: 277 IRTF--LNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGRPEG 334
Query: 189 AVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMV 248
+ LF +M+ L PDEV F +L C+ +GLV +G +Y+ M ++ I P+ H CM
Sbjct: 335 GLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPNFGHQWCMA 394
Query: 249 DLLSRSGHLGDAYELMKSMHE----PHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQ 304
+L S +G +A E +K++ + P + W LL + + G+ LGE +A L E +P
Sbjct: 395 NLYSSAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTGNPTLGESIAKSLIETDPL 454
Query: 305 NAANYILLSNIYAAAERWIDVSLVRSRMRERSVQKIPGC 343
N Y LL NIY+ RW DV+ VR ++ER + +IPGC
Sbjct: 455 NYKYYHLLMNIYSVTGRWEDVNRVREMVKERKIGRIPGC 493
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 109/258 (42%), Gaps = 37/258 (14%)
Query: 74 LISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSS 133
+ Y+ + P QAL + ++ PD + VSL+S + ++ + K
Sbjct: 89 VFKAYLVSSSPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIKHG 148
Query: 134 IDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHG--------- 184
D Q V +L+ M CG +D A KLF E+PKRD+VS+ S+I G+ +G
Sbjct: 149 CD-QVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLF 207
Query: 185 ------------------CGED----AVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVD 222
G + ++ LF M+ G +E ++L AC S +
Sbjct: 208 DEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLK 267
Query: 223 EGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGAC 282
EG + S+ + + ++ S ++D+ + +G A + S+ + W ++ A
Sbjct: 268 EGRSVHASLIRTF-LNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAH 326
Query: 283 KLHGDSDLGEIVANQLFE 300
LHG + G +LFE
Sbjct: 327 CLHGRPEGGL----ELFE 340
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 195 bits (496), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 104/305 (34%), Positives = 175/305 (57%), Gaps = 6/305 (1%)
Query: 43 MIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPD 102
+I+ Y K G + A+ +F+ +++ + ++ Y Q+ +AL +F +M++K V P+
Sbjct: 278 LINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPPN 337
Query: 103 EFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIA--ALLDMNAKCGNMDRALK 160
E+ L+++ ++L L+ + V KS ++HV+ AL++M AK G+++ A K
Sbjct: 338 EYTFAILLNSIAELSLLKQGDLLHGLVLKSGY---RNHVMVGNALVNMYAKSGSIEDARK 394
Query: 161 LFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGL 220
F M RD+V++ +MI G S HG G +A+ F+ M+ G +P+ + F +L ACSH G
Sbjct: 395 AFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQACSHIGF 454
Query: 221 VDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMH-EPHAGAWGALL 279
V++G +YF + +K+ + P H+ C+V LLS++G DA + M++ E AW LL
Sbjct: 455 VEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRTLL 514
Query: 280 GACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQK 339
AC + + LG+ VA E P ++ Y+LLSNI+A + W V+ VRS M R V+K
Sbjct: 515 NACYVRRNYRLGKKVAEYAIEKYPNDSGVYVLLSNIHAKSREWEGVAKVRSLMNNRGVKK 574
Query: 340 IPGCS 344
PG S
Sbjct: 575 EPGVS 579
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 74/135 (54%), Gaps = 4/135 (2%)
Query: 106 LVSLMSATSQLGHLELAQWVDSY--VSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFK 163
L L+ + +L + + + ++ V+ S + + I +L+++ KC RA KLF
Sbjct: 34 LNELLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFD 93
Query: 164 EMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLV-PDEVAFTIILTACSHSGLVD 222
MP+R++VS+C+M++G G + ++LF SM G P+E T++ +CS+SG ++
Sbjct: 94 LMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIE 153
Query: 223 EGWNYFQSMKQKYGI 237
EG F KYG+
Sbjct: 154 EG-KQFHGCFLKYGL 167
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 88/198 (44%), Gaps = 13/198 (6%)
Query: 41 TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEM-ESKNV 99
++I+ Y K + AR LF+ E++VV+W A++ GY +G + LK+F M S
Sbjct: 73 NSLINLYVKCRETVRARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGES 132
Query: 100 KPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRAL 159
+P+EF+ + + S G +E + K + + + V L+ M + C A+
Sbjct: 133 RPNEFVATVVFKSCSNSGRIEEGKQFHGCFLKYGL-ISHEFVRNTLVYMYSLCSGNGEAI 191
Query: 160 KLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACS--- 216
++ ++P DL + S + G G ++ + + E V + + + L S
Sbjct: 192 RVLDDLPYCDLSVFSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLR 251
Query: 217 --------HSGLVDEGWN 226
HS +V G+N
Sbjct: 252 DLNLALQVHSRMVRFGFN 269
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 79/171 (46%), Gaps = 8/171 (4%)
Query: 16 FVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALI 75
+K GDL V + +V+ +++ YAK+G + AR F T +D+V W+ +I
Sbjct: 353 LLKQGDLLHGL-VLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMI 411
Query: 76 SGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELA-QWVDSYVSKSSI 134
SG +G +AL+ F M P+ + ++ A S +G +E + + + K +
Sbjct: 412 SGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDV 471
Query: 135 --DLQQDHVIAALLDMNAKCGNMDRALKLFKEMP-KRDLVSYCSMIQGLSI 182
D+Q I LL +K G A + P + D+V++ +++ +
Sbjct: 472 QPDIQHYTCIVGLL---SKAGMFKDAEDFMRTAPIEWDVVAWRTLLNACYV 519
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 194 bits (494), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 121/384 (31%), Positives = 192/384 (50%), Gaps = 43/384 (11%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAM------PEKNVVSF-------------- 40
+PQ +V++WNAML G+ A F M P+K +S
Sbjct: 376 IPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGG 435
Query: 41 -------------------TTMIDGYAKAGDMAAARFLFEQA-TEKDVVAWSALISGYVQ 80
+ +I Y++ M + +F+ E D+ W+++ISG+
Sbjct: 436 KQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIACWNSMISGFRH 495
Query: 81 NGQPNQALKVFLEMESKNVK-PDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQD 139
N +AL +F M V P+E +++S+ S+L L + V KS +
Sbjct: 496 NMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGY-VSDS 554
Query: 140 HVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLME 199
V AL DM KCG +D A + F + +++ V + MI G +G G++AV L+ M+
Sbjct: 555 FVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISS 614
Query: 200 GLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGD 259
G PD + F +LTACSHSGLV+ G SM++ +GI P DH+ C+VD L R+G L D
Sbjct: 615 GEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHGIEPELDHYICIVDCLGRAGRLED 674
Query: 260 AYELMKSM-HEPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAA 318
A +L ++ ++ + W LL +C++HGD L VA +L L+PQ++A Y+LLSN Y++
Sbjct: 675 AEKLAEATPYKSSSVLWEILLSSCRVHGDVSLARRVAEKLMRLDPQSSAAYVLLSNTYSS 734
Query: 319 AERWIDVSLVRSRMRERSVQKIPG 342
+W D + ++ M + V K PG
Sbjct: 735 LRQWDDSAALQGLMNKNRVHKTPG 758
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 141/295 (47%), Gaps = 8/295 (2%)
Query: 1 MPQRNVASWNAMLCGFVK----DGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAA 56
MP+ NV SWN M+ GF + D + + D+ + N V+ +++ ++GD+
Sbjct: 310 MPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETG 369
Query: 57 RFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQL 116
R +F + V AW+A++SGY +A+ F +M+ +N+KPD+ L ++S+ ++L
Sbjct: 370 RRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARL 429
Query: 117 GHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKE-MPKRDLVSYCS 175
LE + + V ++ I + H+++ L+ + ++C M+ + +F + + + D+ + S
Sbjct: 430 RFLEGGKQIHGVVIRTEIS-KNSHIVSGLIAVYSECEKMEISECIFDDCINELDIACWNS 488
Query: 176 MIQGLSIHGCGEDAVRLFNSMLMEG-LVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQK 234
MI G + A+ LF M L P+E +F +L++CS + G F + K
Sbjct: 489 MISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHG-RQFHGLVVK 547
Query: 235 YGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHGDSD 289
G + D+ + G + A + ++ + W ++ +G D
Sbjct: 548 SGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGD 602
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 108/205 (52%), Gaps = 2/205 (0%)
Query: 10 NAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVV 69
N +L +++ GD AR VFD M ++V S+ + K GD+ A +F+ E+DVV
Sbjct: 45 NRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCKVGDLGEACEVFDGMPERDVV 104
Query: 70 AWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYV 129
+W+ +IS V+ G +AL V+ M P F L S++SA S++
Sbjct: 105 SWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASVLSACSKVLDGVFGMRCHGVA 164
Query: 130 SKSSIDLQQDHVIAALLDMNAKCGNM-DRALKLFKEMPKRDLVSYCSMIQGLSIHGCGED 188
K+ +D + V ALL M AKCG + D +++F+ + + + VSY ++I GL+ +
Sbjct: 165 VKTGLD-KNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLE 223
Query: 189 AVRLFNSMLMEGLVPDEVAFTIILT 213
AV++F M +G+ D V + IL+
Sbjct: 224 AVQMFRLMCEKGVQVDSVCLSNILS 248
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 140/337 (41%), Gaps = 63/337 (18%)
Query: 1 MPQRNVASWNAMLCGFVKDG--------------------------DLSSARGVFDAM-- 32
MP+R+V SWN M+ V+ G LS+ V D +
Sbjct: 98 MPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASVLSACSKVLDGVFG 157
Query: 33 -----------PEKNVVSFTTMIDGYAKAGDMA-AARFLFEQATEKDVVAWSALISGYVQ 80
+KN+ ++ YAK G + +FE ++ + V+++A+I G +
Sbjct: 158 MRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPNEVSYTAVIGGLAR 217
Query: 81 NGQPNQALKVFLEMESKNVKPDEFILVSLMSAT---------SQLGHLELAQWVDSYVSK 131
+ +A+++F M K V+ D L +++S + S++ EL + + +
Sbjct: 218 ENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYGNELGKQIHCLALR 277
Query: 132 SSI--DLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDA 189
DL H+ +LL++ AK +M+ A +F EMP+ ++VS+ MI G + +
Sbjct: 278 LGFGGDL---HLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKS 334
Query: 190 VRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVD 249
V M G P+EV +L AC SG V+ G F S+ Q PS + M+
Sbjct: 335 VEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSIPQ-----PSVSAWNAMLS 389
Query: 250 LLSRSGHLGDAYELMKSMH----EPHAGAWGALLGAC 282
S H +A + M +P +L +C
Sbjct: 390 GYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSC 426
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 88/176 (50%), Gaps = 10/176 (5%)
Query: 144 ALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVP 203
A L K G++ A ++F MP+RD+VS+ +MI L G E A+ ++ M+ +G +P
Sbjct: 77 AFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLP 136
Query: 204 DEVAFTIILTACSHSGLVDEGWNY-FQSMKQKYGISPSPDHFACMVDLLSRSGHLGD-AY 261
+L+ACS ++D + + K G+ + ++ + ++ G + D
Sbjct: 137 SRFTLASVLSACSK--VLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGV 194
Query: 262 ELMKSMHEPHAGAWGALLGACKLHGDSDLGEIVANQLFEL--EPQNAANYILLSNI 315
+ +S+ +P+ ++ A++G L ++ + E V Q+F L E + + LSNI
Sbjct: 195 RVFESLSQPNEVSYTAVIGG--LARENKVLEAV--QMFRLMCEKGVQVDSVCLSNI 246
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 194 bits (494), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 118/384 (30%), Positives = 194/384 (50%), Gaps = 41/384 (10%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVV--SFT----------------- 41
MP+ +V W+ M+ F ++G + A +F M E VV FT
Sbjct: 308 MPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLG 367
Query: 42 --------------------TMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQN 81
+ID YAK M A LF + + K+ V+W+ +I GY
Sbjct: 368 EQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENL 427
Query: 82 GQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHV 141
G+ +A +F E V E S + A + L ++L V K++ + ++ V
Sbjct: 428 GEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTN-NAKKVAV 486
Query: 142 IAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGL 201
+L+DM AKCG++ A +F EM D+ S+ ++I G S HG G A+R+ + M
Sbjct: 487 SNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDC 546
Query: 202 VPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAY 261
P+ + F +L+ CS++GL+D+G F+SM + +GI P +H+ CMV LL RSG L A
Sbjct: 547 KPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAM 606
Query: 262 ELMKSM-HEPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAE 320
+L++ + +EP W A+L A + + A ++ ++ P++ A Y+L+SN+YA A+
Sbjct: 607 KLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEILKINPKDEATYVLVSNMYAGAK 666
Query: 321 RWIDVSLVRSRMRERSVQKIPGCS 344
+W +V+ +R M+E V+K PG S
Sbjct: 667 QWANVASIRKSMKEMGVKKEPGLS 690
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/245 (29%), Positives = 119/245 (48%), Gaps = 12/245 (4%)
Query: 47 YAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFIL 106
Y + GDM+ A +F + + DVV WS +I+ + QNG N+A+ +F+ M V P+EF L
Sbjct: 292 YTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTL 351
Query: 107 VSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMP 166
S+++ + L + + V K DL +V AL+D+ AKC MD A+KLF E+
Sbjct: 352 SSILNGCAIGKCSGLGEQLHGLVVKVGFDLDI-YVSNALIDVYAKCEKMDTAVKLFAELS 410
Query: 167 KRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVD---- 222
++ VS+ ++I G G G A +F L + EV F+ L AC+ +D
Sbjct: 411 SKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQ 470
Query: 223 -EGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGA 281
G + +K +S S ++D+ ++ G + A + M +W AL+
Sbjct: 471 VHGLAIKTNNAKKVAVSNS------LIDMYAKCGDIKFAQSVFNEMETIDVASWNALISG 524
Query: 282 CKLHG 286
HG
Sbjct: 525 YSTHG 529
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 120/262 (45%), Gaps = 13/262 (4%)
Query: 34 EKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLE 93
+ N +I+ Y+ G + +AR +FE KD+V W+ ++S YV+NG +LK+
Sbjct: 178 DSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSC 237
Query: 94 MESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCG 153
M P+ + + + A+ LG + A+ V + K+ L V LL + + G
Sbjct: 238 MRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDP-RVGVGLLQLYTQLG 296
Query: 154 NMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILT 213
+M A K+F EMPK D+V + MI +G +AV LF M +VP+E + IL
Sbjct: 297 DMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILN 356
Query: 214 ACS---HSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEP 270
C+ SGL ++ + K G ++D+ ++ + A +L +
Sbjct: 357 GCAIGKCSGLGEQ----LHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSK 412
Query: 271 HAGAWGALLGACKLHGDSDLGE 292
+ +W + + G +LGE
Sbjct: 413 NEVSWNTV-----IVGYENLGE 429
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 194 bits (493), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 122/386 (31%), Positives = 198/386 (51%), Gaps = 44/386 (11%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVS----FT--------------- 41
MP +NV SW M+CG ++ A +F M + S FT
Sbjct: 185 MPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMG 244
Query: 42 --------------------TMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQN 81
++I YA + +R +F++ + V W+AL+SGY N
Sbjct: 245 IQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLN 304
Query: 82 GQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHV 141
+ AL +F M ++ P++ S +++ S LG L+ + + K + L+ D
Sbjct: 305 KKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVK--LGLETDAF 362
Query: 142 IA-ALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEG 200
+ +L+ M + GN++ A+ +F ++ K+ +VS+ S+I G + HG G+ A +F M+
Sbjct: 363 VGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLN 422
Query: 201 LVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYG-ISPSPDHFACMVDLLSRSGHLGD 259
PDE+ FT +L+ACSH G +++G F M I H+ CMVD+L R G L +
Sbjct: 423 KEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILGRCGKLKE 482
Query: 260 AYELMKSMH-EPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAA 318
A EL++ M +P+ W ALL AC++H D D GE A +F L+ +++A Y+LLSNIYA+
Sbjct: 483 AEELIERMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKSSAAYVLLSNIYAS 542
Query: 319 AERWIDVSLVRSRMRERSVQKIPGCS 344
A RW +VS +R +M++ + K PG S
Sbjct: 543 AGRWSNVSKLRVKMKKNGIMKKPGSS 568
Score = 140 bits (354), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 93/346 (26%), Positives = 164/346 (47%), Gaps = 35/346 (10%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLF 60
MP R+V SWN+M+ G V+ GD+++A +FD MPE++VVS+T M++G ++G + A LF
Sbjct: 92 MPVRDVVSWNSMISGCVECGDMNTAVKLFDEMPERSVVSWTAMVNGCFRSGKVDQAERLF 151
Query: 61 EQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNV--------------------- 99
Q KD AW++++ GY+Q G+ + ALK+F +M KNV
Sbjct: 152 YQMPVKDTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALD 211
Query: 100 ----------KPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMN 149
K +++A + + V + K L +++V A+L+
Sbjct: 212 LFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGF-LYEEYVSASLITFY 270
Query: 150 AKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFT 209
A C + + K+F E + + +++ G S++ EDA+ +F+ ML ++P++ F
Sbjct: 271 ANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFA 330
Query: 210 IILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHE 269
L +CS G +D G + K G+ +V + S SG++ DA + + +
Sbjct: 331 SGLNSCSALGTLDWG-KEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFK 389
Query: 270 PHAGAWGALLGACKLHGDSDLGEIVANQLFEL--EPQNAANYILLS 313
+W +++ C HG ++ Q+ L EP LLS
Sbjct: 390 KSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLS 435
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 132/285 (46%), Gaps = 41/285 (14%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLF 60
+P +V+ + M+ G+ + L A +FD MP ++VVS+ +MI G + GDM A LF
Sbjct: 61 VPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLF 120
Query: 61 EQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLE 120
++ E+ VV+W+A+++G ++G+ +QA ++F +M K+
Sbjct: 121 DEMPERSVVSWTAMVNGCFRSGKVDQAERLFYQMPVKDT--------------------- 159
Query: 121 LAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGL 180
A W + ++ L G +D ALKLFK+MP ++++S+ +MI GL
Sbjct: 160 -AAW--------------NSMVHGYLQF----GKVDDALKLFKQMPGKNVISWTTMICGL 200
Query: 181 SIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPS 240
+ +A+ LF +ML + FT ++TAC+++ G + K G
Sbjct: 201 DQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQ-VHGLIIKLGFLYE 259
Query: 241 PDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLH 285
A ++ + +GD+ ++ W ALL L+
Sbjct: 260 EYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLN 304
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 64/137 (46%), Gaps = 15/137 (10%)
Query: 158 ALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSH 217
AL LF EMP RD+VS+ SMI G G AV+LF+ M + V++T ++ C
Sbjct: 85 ALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEMPERSV----VSWTAMVNGCFR 140
Query: 218 SGLVDEGWNYFQSMKQKYGISPSPDHFA--CMVDLLSRSGHLGDAYELMKSMHEPHAGAW 275
SG VD+ F M P D A MV + G + DA +L K M + +W
Sbjct: 141 SGKVDQAERLFYQM-------PVKDTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISW 193
Query: 276 GALLGACKLHGDSDLGE 292
++ C L + GE
Sbjct: 194 TTMI--CGLDQNERSGE 208
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 194 bits (493), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 121/385 (31%), Positives = 193/385 (50%), Gaps = 42/385 (10%)
Query: 1 MPQRNVASWNAMLCGFVK----DGDLSSAR---------------GVFDAMPEKNVVSFT 41
MP R + +WNAM+ G ++ + LS R VF VS
Sbjct: 51 MPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIG 110
Query: 42 TMIDGYA--------------------KAGDMAAARFLFEQATEKDVVAWSALISGYVQN 81
I GY + G + + +++VAW+ LI G QN
Sbjct: 111 QQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQN 170
Query: 82 GQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHV 141
G P L ++ M+ +P++ V+++S+ S L Q + + K V
Sbjct: 171 GCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVA-V 229
Query: 142 IAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLME-G 200
+++L+ M +KCG + A K F E D V + SMI HG G++A+ LFN+M +
Sbjct: 230 VSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTN 289
Query: 201 LVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDA 260
+ +EVAF +L ACSHSGL D+G F M +KYG P H+ C+VDLL R+G L A
Sbjct: 290 MEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQA 349
Query: 261 YELMKSMH-EPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAA 319
+++SM + W LL AC +H ++++ + V ++ +++P ++A Y+LL+N++A+A
Sbjct: 350 EAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQIDPNDSACYVLLANVHASA 409
Query: 320 ERWIDVSLVRSRMRERSVQKIPGCS 344
+RW DVS VR MR+++V+K G S
Sbjct: 410 KRWRDVSEVRKSMRDKNVKKEAGIS 434
Score = 135 bits (339), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 152/305 (49%), Gaps = 4/305 (1%)
Query: 16 FVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALI 75
+ K GD SA V+ M +KN +S +I+GY +AGD+ AR +F++ ++ + W+A+I
Sbjct: 4 YSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMI 63
Query: 76 SGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSID 135
+G +Q + L +F EM PDE+ L S+ S ++ L + + Q + Y K ++
Sbjct: 64 AGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLE 123
Query: 136 LQQDHVI-AALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFN 194
L D V+ ++L M + G + + + MP R+LV++ ++I G + +GC E + L+
Sbjct: 124 L--DLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYK 181
Query: 195 SMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRS 254
M + G P+++ F +L++CS + +G + K G S + ++ + S+
Sbjct: 182 MMKISGCRPNKITFVTVLSSCSDLAIRGQG-QQIHAEAIKIGASSVVAVVSSLISMYSKC 240
Query: 255 GHLGDAYELMKSMHEPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSN 314
G LGDA + + W +++ A HG D + N + E L+
Sbjct: 241 GCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNL 300
Query: 315 IYAAA 319
+YA +
Sbjct: 301 LYACS 305
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 193 bits (491), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 114/333 (34%), Positives = 186/333 (55%), Gaps = 7/333 (2%)
Query: 20 GDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYV 79
GDL S+R +FD + VV+ +++D + G+M A F++ DVV+W+ +I+G+
Sbjct: 135 GDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAFEYFQRMPVTDVVSWTTVINGFS 194
Query: 80 QNGQPNQALKVFLEM---ESKNVKPDEFILVSLMSATSQL--GHLELAQWVDSYVSKSSI 134
+ G +AL VF EM E + P+E VS++S+ + G + L + + YV I
Sbjct: 195 KKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCANFDQGGIRLGKQIHGYVMSKEI 254
Query: 135 DLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFN 194
+ + ALLDM K G+++ AL +F ++ + + ++ ++I L+ +G + A+ +F
Sbjct: 255 -ILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAWNAIISALASNGRPKQALEMFE 313
Query: 195 SMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRS 254
M + P+ + ILTAC+ S LVD G F S+ +Y I P+ +H+ C+VDL+ R+
Sbjct: 314 MMKSSYVHPNGITLLAILTACARSKLVDLGIQLFSSICSEYKIIPTSEHYGCVVDLIGRA 373
Query: 255 GHLGDAYELMKSM-HEPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLS 313
G L DA ++S+ EP A GALLGACK+H +++LG V QL L+PQ+ Y+ LS
Sbjct: 374 GLLVDAANFIQSLPFEPDASVLGALLGACKIHENTELGNTVGKQLIGLQPQHCGQYVALS 433
Query: 314 NIYAAAERWIDVSLVRSRMRERSVQKIPGCSKL 346
A W + +R M E ++KIP S L
Sbjct: 434 TFNALDSNWSEAEKMRKAMIEAGIRKIPAYSVL 466
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 193 bits (491), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 116/344 (33%), Positives = 191/344 (55%), Gaps = 25/344 (7%)
Query: 5 NVASWNAMLCGFVKDGDLSSARGV----FDAMPEKNVVSFTTMIDGYAKAGDMAAARFLF 60
NV++ + L GDLS A + ++ T +I Y K G +++AR +F
Sbjct: 226 NVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGMYGKTGGISSARRIF 285
Query: 61 EQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLE 120
+ A KDVV W+ +I Y + G + + + +M+ + +KP+ V L+S+
Sbjct: 286 DCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSC------- 338
Query: 121 LAQWVDSYVSKSSIDLQQDHVIA-------ALLDMNAKCGNMDRALKLFKEMPKRDLVSY 173
A ++V ++ DL ++ IA AL+DM AK G +++A+++F M +D+ S+
Sbjct: 339 -AYSEAAFVGRTVADLLEEERIALDAILGTALVDMYAKVGLLEKAVEIFNRMKDKDVKSW 397
Query: 174 CSMIQGLSIHGCGEDAVRLFNSMLMEG--LVPDEVAFTIILTACSHSGLVDEGWNYFQSM 231
+MI G HG +AV LFN M E + P+E+ F ++L ACSH GLV EG F+ M
Sbjct: 398 TAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVVLNACSHGGLVMEGIRCFKRM 457
Query: 232 KQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMH-EPHAGAWGALLGACKLHGDSDL 290
+ Y +P +H+ C+VDLL R+G L +AYEL++++ + AW ALL AC+++G++DL
Sbjct: 458 VEAYSFTPKVEHYGCVVDLLGRAGQLEEAYELIRNLPITSDSTAWRALLAACRVYGNADL 517
Query: 291 GEIVANQLFELEPQNAANYILLSNIYAAA---ERWIDVSLVRSR 331
GE V +L E+ + A+ ILL+ +A A E+ +D L + R
Sbjct: 518 GESVMMRLAEMGETHPADAILLAGTHAVAGNPEKSLDNELNKGR 561
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/332 (21%), Positives = 143/332 (43%), Gaps = 43/332 (12%)
Query: 46 GYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFI 105
++ D+ A +FE + ++ ++ +I GY + +P +A VF ++ +K + D F
Sbjct: 68 AFSSVLDIRYASSIFEHVSNTNLFMFNTMIRGYSISDEPERAFSVFNQLRAKGLTLDRFS 127
Query: 106 LVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEM 165
++ + + S+ + + + + +S + D + AL+ CG + A K+F EM
Sbjct: 128 FITTLKSCSRELCVSIGEGLHGIALRSGFMVFTD-LRNALIHFYCVCGKISDARKVFDEM 186
Query: 166 PKR-DLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTA---------- 214
P+ D V++ +++ G A+ LF M +V + L+A
Sbjct: 187 PQSVDAVTFSTLMNGYLQVSKKALALDLFRIMRKSEVVVNVSTLLSFLSAISDLGDLSGA 246
Query: 215 ------CSHSGLVDEGWNYFQSMKQKY----GISPSPDHF-----------ACMVDLLSR 253
C GL D + ++ Y GIS + F CM+D ++
Sbjct: 247 ESAHVLCIKIGL-DLDLHLITALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAK 305
Query: 254 SGHLGDAYELMKSMH----EPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANY 309
+G L + L++ M +P++ + LL +C + +G VA+ L E E + A +
Sbjct: 306 TGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVAD-LLE-EERIALDA 363
Query: 310 IL---LSNIYAAAERWIDVSLVRSRMRERSVQ 338
IL L ++YA + +RM+++ V+
Sbjct: 364 ILGTALVDMYAKVGLLEKAVEIFNRMKDKDVK 395
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 191 bits (484), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 102/305 (33%), Positives = 177/305 (58%), Gaps = 9/305 (2%)
Query: 36 NVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEME 95
+V ++ YAK GD+ AR +F+ KD V+W+++++GY+ +G ++AL +F M
Sbjct: 229 DVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMV 288
Query: 96 SKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNM 155
++PD+ + S+++ H + + +V + ++ + V AL+ + +K G +
Sbjct: 289 QNGIEPDKVAISSVLARVLSFKH---GRQLHGWVIRRGMEWELS-VANALIVLYSKRGQL 344
Query: 156 DRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTAC 215
+A +F +M +RD VS+ ++I S H + ++ F M PD + F +L+ C
Sbjct: 345 GQACFIFDQMLERDTVSWNAII---SAHSKNSNGLKYFEQMHRANAKPDGITFVSVLSLC 401
Query: 216 SHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAG-- 273
+++G+V++G F M ++YGI P +H+ACMV+L R+G + +AY ++ AG
Sbjct: 402 ANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYGRAGMMEEAYSMIVQEMGLEAGPT 461
Query: 274 AWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWIDVSLVRSRMR 333
WGALL AC LHG++D+GE+ A +LFELEP N N+ LL IY+ A+R DV VR M
Sbjct: 462 VWGALLYACYLHGNTDIGEVAAQRLFELEPDNEHNFELLIRIYSKAKRAEDVERVRQMMV 521
Query: 334 ERSVQ 338
+R ++
Sbjct: 522 DRGLE 526
Score = 108 bits (269), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 125/245 (51%), Gaps = 11/245 (4%)
Query: 41 TTMIDGYAKAGDMAAARFLFEQATEKDV--VAWSALISGYVQNGQPNQALKVFLEMESKN 98
+ ++ YA G A +F++ +++D AW++LISGY + GQ A+ ++ +M
Sbjct: 131 SKLVRLYASCGYAEVAHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDG 190
Query: 99 VKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRA 158
VKPD F ++ A +G +++ + + + K +V+ AL+ M AKCG++ +A
Sbjct: 191 VKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDV-YVLNALVVMYAKCGDIVKA 249
Query: 159 LKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTAC--S 216
+F +P +D VS+ SM+ G HG +A+ +F M+ G+ PD+VA + +L
Sbjct: 250 RNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVLARVLSF 309
Query: 217 HSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWG 276
G GW + M+ + ++ + ++ L S+ G LG A + M E +W
Sbjct: 310 KHGRQLHGWVIRRGMEWELSVANA------LIVLYSKRGQLGQACFIFDQMLERDTVSWN 363
Query: 277 ALLGA 281
A++ A
Sbjct: 364 AIISA 368
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 48/100 (48%), Gaps = 13/100 (13%)
Query: 141 VIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYC--SMIQGLSIHGCGEDAVRLFNSMLM 198
+ + L+ + A CG + A ++F M KRD + S+I G + G EDA+ L+ M
Sbjct: 129 ISSKLVRLYASCGYAEVAHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAE 188
Query: 199 EGLVPDEVAFTIILTACS-----------HSGLVDEGWNY 227
+G+ PD F +L AC H LV EG+ Y
Sbjct: 189 DGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGY 228
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 190 bits (483), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 106/309 (34%), Positives = 178/309 (57%), Gaps = 5/309 (1%)
Query: 37 VVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMES 96
V+ +I+ Y+K + A +F K+V++W+++I+G N + +AL +FL
Sbjct: 433 VIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEAL-IFLRQMK 491
Query: 97 KNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMD 156
++P+ L + ++A +++G L + + ++V ++ + L D + ALLDM +CG M+
Sbjct: 492 MTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLD-DFLPNALLDMYVRCGRMN 550
Query: 157 RALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACS 216
A F K+D+ S+ ++ G S G G V LF+ M+ + PDE+ F +L CS
Sbjct: 551 TAWSQFNS-QKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCS 609
Query: 217 HSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMH-EPHAGAW 275
S +V +G YF M + YG++P+ H+AC+VDLL R+G L +A++ ++ M P W
Sbjct: 610 KSQMVRQGLMYFSKM-EDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVW 668
Query: 276 GALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRER 335
GALL AC++H DLGE+ A +FEL+ ++ YILL N+YA +W +V+ VR M+E
Sbjct: 669 GALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKEN 728
Query: 336 SVQKIPGCS 344
+ GCS
Sbjct: 729 GLTVDAGCS 737
Score = 118 bits (295), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 127/266 (47%), Gaps = 45/266 (16%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAM-----PEKNVVSF--------------- 40
M +RN+ SWN ++ G+ K G A ++ M + +V +F
Sbjct: 155 MSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLAR 214
Query: 41 --------------------TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQ 80
+I Y K GD+ +AR LF++ +D+++W+A+ISGY +
Sbjct: 215 GKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFE 274
Query: 81 NGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKS--SIDLQQ 138
NG ++ L++F M +V PD L S++SA LG L + + +YV + ++D+
Sbjct: 275 NGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDIS- 333
Query: 139 DHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLM 198
V +L M G+ A KLF M ++D+VS+ +MI G + + A+ + M
Sbjct: 334 --VCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQ 391
Query: 199 EGLVPDEVAFTIILTACSHSGLVDEG 224
+ + PDE+ +L+AC+ G +D G
Sbjct: 392 DSVKPDEITVAAVLSACATLGDLDTG 417
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 118/239 (49%), Gaps = 44/239 (18%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMP----EKNVVSFTTMIDG---------- 46
MP+R++ SWNAM+ G+ ++G +F AM + ++++ T++I
Sbjct: 257 MPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLG 316
Query: 47 -------------------------YAKAGDMAAARFLFEQATEKDVVAWSALISGYVQN 81
Y AG A LF + KD+V+W+ +ISGY N
Sbjct: 317 RDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYN 376
Query: 82 GQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHV 141
P++A+ + M+ +VKPDE + +++SA + LG L+ + K+ + +V
Sbjct: 377 FLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARL---ISYV 433
Query: 142 IAA--LLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLM 198
I A L++M +KC +D+AL +F +P+++++S+ S+I GL ++ +A+ M M
Sbjct: 434 IVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMKM 492
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 94/174 (54%), Gaps = 2/174 (1%)
Query: 47 YAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEME-SKNVKPDEFI 105
+ + G++ A ++F + +E+++ +W+ L+ GY + G ++A+ ++ M VKPD +
Sbjct: 139 FVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYT 198
Query: 106 LVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEM 165
++ + L + V +V + +L D V+ AL+ M KCG++ A LF M
Sbjct: 199 FPCVLRTCGGIPDLARGKEVHVHVVRYGYELDID-VVNALITMYVKCGDVKSARLLFDRM 257
Query: 166 PKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSG 219
P+RD++S+ +MI G +G + + LF +M + PD + T +++AC G
Sbjct: 258 PRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLG 311
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 90/206 (43%), Gaps = 3/206 (1%)
Query: 75 ISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSI 134
+ G NG+ +A+K+ M+ V DE + V+L+ E V S ++ SS+
Sbjct: 66 LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYS-IALSSM 124
Query: 135 DLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFN 194
+ A L M + GN+ A +F +M +R+L S+ ++ G + G ++A+ L++
Sbjct: 125 SSLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYH 184
Query: 195 SML-MEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSR 253
ML + G+ PD F +L C + G +YG D ++ + +
Sbjct: 185 RMLWVGGVKPDVYTFPCVLRTCGGIPDLARG-KEVHVHVVRYGYELDIDVVNALITMYVK 243
Query: 254 SGHLGDAYELMKSMHEPHAGAWGALL 279
G + A L M +W A++
Sbjct: 244 CGDVKSARLLFDRMPRRDIISWNAMI 269
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 189 bits (481), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 103/305 (33%), Positives = 182/305 (59%), Gaps = 3/305 (0%)
Query: 41 TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVK 100
++++D YAK G++ AR +F++ +++VV WS ++ GY Q G+ +AL +F E +N+
Sbjct: 155 SSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLA 214
Query: 101 PDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALK 160
+++ S++S + LEL + + +S S V ++L+ + +KCG + A +
Sbjct: 215 VNDYSFSSVISVCANSTLLELGRQIHG-LSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQ 273
Query: 161 LFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGL 220
+F E+P ++L + +M++ + H + + LF M + G+ P+ + F +L ACSH+GL
Sbjct: 274 VFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGL 333
Query: 221 VDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMH-EPHAGAWGALL 279
VDEG YF MK+ I P+ H+A +VD+L R+G L +A E++ +M +P WGALL
Sbjct: 334 VDEGRYYFDQMKESR-IEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGALL 392
Query: 280 GACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQK 339
+C +H +++L A+++FEL P ++ +I LSN YAA R+ D + R +R+R +K
Sbjct: 393 TSCTVHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADGRFEDAAKARKLLRDRGEKK 452
Query: 340 IPGCS 344
G S
Sbjct: 453 ETGLS 457
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 129/248 (52%), Gaps = 2/248 (0%)
Query: 41 TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVK 100
+I+ Y+K+ +R FE + +K WS++IS + QN P +L+ +M + N++
Sbjct: 54 NNLINFYSKSQLPFDSRRAFEDSPQKSSTTWSSIISCFAQNELPWMSLEFLKKMMAGNLR 113
Query: 101 PDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALK 160
PD+ +L S + + L ++ + V K+ D V ++L+DM AKCG + A K
Sbjct: 114 PDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADV-FVGSSLVDMYAKCGEIVYARK 172
Query: 161 LFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGL 220
+F EMP+R++V++ M+ G + G E+A+ LF L E L ++ +F+ +++ C++S L
Sbjct: 173 MFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVISVCANSTL 232
Query: 221 VDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLG 280
++ G + K S + +V L S+ G AY++ + + G W A+L
Sbjct: 233 LELG-RQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLK 291
Query: 281 ACKLHGDS 288
A H +
Sbjct: 292 AYAQHSHT 299
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 93/205 (45%), Gaps = 40/205 (19%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVF-DAMPEK---NVVSFTTMIDG---------- 46
MPQRNV +W+ M+ G+ + G+ A +F +A+ E N SF+++I
Sbjct: 177 MPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVISVCANSTLLELG 236
Query: 47 -------------------------YAKAGDMAAARFLFEQATEKDVVAWSALISGYVQN 81
Y+K G A +F + K++ W+A++ Y Q+
Sbjct: 237 RQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQH 296
Query: 82 GQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHV 141
+ +++F M+ +KP+ +++++A S G ++ ++ + +S I+ H
Sbjct: 297 SHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGRYYFDQMKESRIEPTDKHY 356
Query: 142 IAALLDMNAKCGNMDRALKLFKEMP 166
A+L+DM + G + AL++ MP
Sbjct: 357 -ASLVDMLGRAGRLQEALEVITNMP 380
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 186 bits (473), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 113/385 (29%), Positives = 199/385 (51%), Gaps = 49/385 (12%)
Query: 4 RNVASWNAMLCGFVKDGDLSSARGVFDAMP------------------------------ 33
RN+ SWN++L GFV + A +F M
Sbjct: 291 RNIVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSI 350
Query: 34 ---------EKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQP 84
E N V+ +++ID Y + A + + T KDVV+ S +ISG G+
Sbjct: 351 HGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRS 410
Query: 85 NQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAA 144
++A+ +F M P+ ++SL++A S L ++W + S+ + V +
Sbjct: 411 DEAISIFCHMRDT---PNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISVGTS 467
Query: 145 LLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPD 204
++D AKCG ++ A + F ++ +++++S+ +I +I+G + A+ LF+ M +G P+
Sbjct: 468 IVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAINGLPDKALALFDEMKQKGYTPN 527
Query: 205 EVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELM 264
V + L+AC+H GLV +G F+SM ++ PS H++C+VD+LSR+G + A EL+
Sbjct: 528 AVTYLAALSACNHGGLVKKGLMIFKSMVEE-DHKPSLQHYSCIVDMLSRAGEIDTAVELI 586
Query: 265 KSMHE---PHAGAWGALLGACKLHGDSDL--GEIVANQLFELEPQNAANYILLSNIYAAA 319
K++ E A AWGA+L C+ + E+VA ++ ELEP ++ Y+L S+ +AA
Sbjct: 587 KNLPEDVKAGASAWGAILSGCRNRFKKLIITSEVVA-EVLELEPLCSSGYLLASSTFAAE 645
Query: 320 ERWIDVSLVRSRMRERSVQKIPGCS 344
+ W DV+++R ++ER V+ + G S
Sbjct: 646 KSWEDVAMMRRLVKERKVRVVAGYS 670
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 126/273 (46%), Gaps = 42/273 (15%)
Query: 52 DMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEM-ESKNVKPDEFILVSLM 110
D +AR LF++ +E+DV++WS +I YVQ+ +P LK+F EM +PD + S++
Sbjct: 174 DSLSARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVL 233
Query: 111 SATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDL 170
A + + +++ + V + + DL V +L+DM +K ++D A ++F E R++
Sbjct: 234 KACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNI 293
Query: 171 VSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTAC--------------- 215
VS+ S++ G + ++A+ +F+ M+ E + DEV +L C
Sbjct: 294 VSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGV 353
Query: 216 --------------------SHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSG 255
+ LVD+ SM K +S S M+ L+ +G
Sbjct: 354 IIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCST-----MISGLAHAG 408
Query: 256 HLGDAYELMKSMHE-PHAGAWGALLGACKLHGD 287
+A + M + P+A +LL AC + D
Sbjct: 409 RSDEAISIFCHMRDTPNAITVISLLNACSVSAD 441
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 128/255 (50%), Gaps = 6/255 (2%)
Query: 36 NVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEME 95
+V ++ID Y+K D+ +A +F++ T +++V+W+++++G+V N + ++AL++F M
Sbjct: 261 DVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMV 320
Query: 96 SKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNM 155
+ V+ DE +VSL+ + + + + + + +++L+D C +
Sbjct: 321 QEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYE-SNEVALSSLIDAYTSCSLV 379
Query: 156 DRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTAC 215
D A + M +D+VS +MI GL+ G ++A+ +F M P+ + +L AC
Sbjct: 380 DDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHMRD---TPNAITVISLLNAC 436
Query: 216 SHSG-LVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGA 274
S S L W + ++++ I+ + +VD ++ G + A + E + +
Sbjct: 437 SVSADLRTSKWAHGIAIRRSLAINDISVGTS-IVDAYAKCGAIEMARRTFDQITEKNIIS 495
Query: 275 WGALLGACKLHGDSD 289
W ++ A ++G D
Sbjct: 496 WTVIISAYAINGLPD 510
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 112/251 (44%), Gaps = 27/251 (10%)
Query: 42 TMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKP 101
++ D Y K GD+ + F+ +D V+W+ ++ G + G + L F ++ +P
Sbjct: 66 SIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGFEP 125
Query: 102 DEFILVSLMSATSQLGHLELAQWVD-----SYVSKS---SIDLQQDHVIAALLDMNAKCG 153
+ LV ++ A L W D YV +S I Q+ ++ D ++
Sbjct: 126 NTSTLVLVIHACRSL-------WFDGEKIHGYVIRSGFCGISSVQNSILCMYADSDSL-- 176
Query: 154 NMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLV-PDEVAFTIIL 212
A KLF EM +RD++S+ +I+ ++LF M+ E PD V T +L
Sbjct: 177 ---SARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVL 233
Query: 213 TACSHSGLVDEGWNYFQ-SMKQKYGISPSPDHFAC--MVDLLSRSGHLGDAYELMKSMHE 269
AC+ +D G + S+++ + ++ D F C ++D+ S+ + A+ +
Sbjct: 234 KACTVMEDIDVGRSVHGFSIRRGFDLA---DVFVCNSLIDMYSKGFDVDSAFRVFDETTC 290
Query: 270 PHAGAWGALLG 280
+ +W ++L
Sbjct: 291 RNIVSWNSILA 301
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 182 bits (462), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 112/346 (32%), Positives = 189/346 (54%), Gaps = 6/346 (1%)
Query: 3 QRNVASWNAML--CGFVKD-GDLSSARGVF-DAMPEKNVVSFTTMIDGYAKAGDMAAARF 58
Q N ++ ++L CG +KD G+ G+ + E + S T+++ Y + + +
Sbjct: 264 QPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLR 323
Query: 59 LFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGH 118
+F+ + V+W++LISG VQNG+ AL F +M ++KP+ F L S + S L
Sbjct: 324 VFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAM 383
Query: 119 LELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQ 178
E + + V+K D + + + L+D+ KCG D A +F + + D++S +MI
Sbjct: 384 FEEGRQIHGIVTKYGFD-RDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIY 442
Query: 179 GLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGIS 238
+ +G G +A+ LF M+ GL P++V +L AC++S LV+EG F S + K I
Sbjct: 443 SYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFR-KDKIM 501
Query: 239 PSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHGDSDLGEIVANQL 298
+ DH+ACMVDLL R+G L +A L + P W LL ACK+H ++ E + ++
Sbjct: 502 LTNDHYACMVDLLGRAGRLEEAEMLTTEVINPDLVLWRTLLSACKVHRKVEMAERITRKI 561
Query: 299 FELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQKIPGCS 344
E+EP + IL+SN+YA+ +W V ++S+M++ ++K P S
Sbjct: 562 LEIEPGDEGTLILMSNLYASTGKWNRVIEMKSKMKDMKLKKNPAMS 607
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 127/256 (49%), Gaps = 1/256 (0%)
Query: 38 VSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESK 97
+S + ++D K GD+ AR +F+ +E+ +V W++LI+ +++ + +A++++ M +
Sbjct: 100 ISGSKLVDASLKCGDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITN 159
Query: 98 NVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDR 157
NV PDE+ L S+ A S L + AQ +++ V +AL+DM K G
Sbjct: 160 NVLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTRE 219
Query: 158 ALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSH 217
A + + ++D+V ++I G S G +AV+ F SML+E + P+E + +L +C +
Sbjct: 220 AKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGN 279
Query: 218 SGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGA 277
+ G + K G + ++ + R + D+ + K + P+ +W +
Sbjct: 280 LKDIGNG-KLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTS 338
Query: 278 LLGACKLHGDSDLGEI 293
L+ +G ++ I
Sbjct: 339 LISGLVQNGREEMALI 354
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 114/238 (47%), Gaps = 2/238 (0%)
Query: 18 KDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISG 77
K+ S V + NV + ++D Y K G A+ + ++ EKDVV +ALI G
Sbjct: 182 KEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVG 241
Query: 78 YVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQ 137
Y Q G+ +A+K F M + V+P+E+ S++ + L + + + + KS +
Sbjct: 242 YSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESA 301
Query: 138 QDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSML 197
+LL M +C +D +L++FK + + VS+ S+I GL +G E A+ F M+
Sbjct: 302 LASQ-TSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMM 360
Query: 198 MEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSG 255
+ + P+ + L CS+ + +EG + KYG + ++DL + G
Sbjct: 361 RDSIKPNSFTLSSALRGCSNLAMFEEG-RQIHGIVTKYGFDRDKYAGSGLIDLYGKCG 417
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 182 bits (462), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 106/351 (30%), Positives = 189/351 (53%), Gaps = 12/351 (3%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVF----DAMPEKNVVSFTTMIDGYAKAGDMAAA 56
+ ++V +WN+M+ G+ + G A +F DA N++++ TMI GY K GD A
Sbjct: 413 VKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEA 472
Query: 57 RFLFEQ-----ATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMS 111
LF++ +++ W+ +I+GY+QNG+ ++AL++F +M+ P+ ++SL+
Sbjct: 473 MDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLP 532
Query: 112 ATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLV 171
A + L ++ + + V + ++D V AL D AK G+++ + +F M +D++
Sbjct: 533 ACANLLGAKMVREIHGCVLRRNLDAIH-AVKNALTDTYAKSGDIEYSRTIFLGMETKDII 591
Query: 172 SYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSM 231
++ S+I G +HG A+ LFN M +G+ P+ + I+ A G VDEG F S+
Sbjct: 592 TWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVFYSI 651
Query: 232 KQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMH-EPHAGAWGALLGACKLHGDSDL 290
Y I P+ +H + MV L R+ L +A + ++ M+ + W + L C++HGD D+
Sbjct: 652 ANDYHIIPALEHCSAMVYLYGRANRLEEALQFIQEMNIQSETPIWESFLTGCRIHGDIDM 711
Query: 291 GEIVANQLFELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQKIP 341
A LF LEP+N A ++S IYA + + SL ++ R ++ K P
Sbjct: 712 AIHAAENLFSLEPENTATESIVSQIYALGAK-LGRSLEGNKPRRDNLLKKP 761
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 124/253 (49%), Gaps = 4/253 (1%)
Query: 15 GFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSAL 74
G + G + AR F E +V T ++ YAK G +A AR +F+ E+++ WSA+
Sbjct: 95 GSIHLGRILHAR--FGLFTEPDVFVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAM 152
Query: 75 ISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSI 134
I Y + + + K+F M V PD+F+ ++ + G +E + + S V K +
Sbjct: 153 IGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGM 212
Query: 135 DLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFN 194
V ++L + AKCG +D A K F+ M +RD++++ S++ +G E+AV L
Sbjct: 213 S-SCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVK 271
Query: 195 SMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRS 254
M EG+ P V + I++ + G D + Q M + +GI+ + M+ L +
Sbjct: 272 EMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKM-ETFGITADVFTWTAMISGLIHN 330
Query: 255 GHLGDAYELMKSM 267
G A ++ + M
Sbjct: 331 GMRYQALDMFRKM 343
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 140/294 (47%), Gaps = 13/294 (4%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNV----VSFTTMIDGYAKAGDMAAA 56
M +R+V +WN++L + ++G A + M ++ + V++ +I GY + G AA
Sbjct: 242 MRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAA 301
Query: 57 RFLFEQ----ATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSA 112
L ++ DV W+A+ISG + NG QAL +F +M V P+ ++S +SA
Sbjct: 302 MDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSA 361
Query: 113 TSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVS 172
S L + V S K + V +L+DM +KCG ++ A K+F + +D+ +
Sbjct: 362 CSCLKVINQGSEVHSIAVKMGF-IDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYT 420
Query: 173 YCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMK 232
+ SMI G G A LF M L P+ + + +++ +G E + FQ M+
Sbjct: 421 WNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRME 480
Query: 233 QKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMH----EPHAGAWGALLGAC 282
+ + + + ++ ++G +A EL + M P++ +LL AC
Sbjct: 481 KDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPAC 534
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 72/327 (22%), Positives = 134/327 (40%), Gaps = 81/327 (24%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVS----FTTMIDG---------- 46
M +RN+ +W+AM+ + ++ +F M + V+ F ++ G
Sbjct: 141 MRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAG 200
Query: 47 -------------------------YAKAGDMAAARFLFEQATEKDVVAWSALISGYVQN 81
YAK G++ A F + E+DV+AW++++ Y QN
Sbjct: 201 KVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQN 260
Query: 82 GQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHV 141
G+ +A+++ EME + + P L+ +QLG
Sbjct: 261 GKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLG------------------------ 296
Query: 142 IAALLDMNAKCGNMDRALKLFKEMP----KRDLVSYCSMIQGLSIHGCGEDAVRLFNSML 197
KC D A+ L ++M D+ ++ +MI GL +G A+ +F M
Sbjct: 297 ---------KC---DAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMF 344
Query: 198 MEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHL 257
+ G+VP+ V ++ACS ++++G + S+ K G +VD+ S+ G L
Sbjct: 345 LAGVVPNAVTIMSAVSACSCLKVINQG-SEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKL 403
Query: 258 GDAYELMKSMHEPHAGAWGALL-GACK 283
DA ++ S+ W +++ G C+
Sbjct: 404 EDARKVFDSVKNKDVYTWNSMITGYCQ 430
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/273 (21%), Positives = 117/273 (42%), Gaps = 52/273 (19%)
Query: 36 NVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEME 95
+V+ +++D Y+K G + AR +F+ KDV W+++I+GY Q G +A ++F M+
Sbjct: 386 DVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQ 445
Query: 96 SKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNM 155
N++P+ +++S Y+ K G+
Sbjct: 446 DANLRPNIITWNTMISG---------------YI---------------------KNGDE 469
Query: 156 DRALKLFKEMPK-----RDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTI 210
A+ LF+ M K R+ ++ +I G +G ++A+ LF M +P+ V
Sbjct: 470 GEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILS 529
Query: 211 ILTACSH---SGLVDE--GWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMK 265
+L AC++ + +V E G +++ + + + + D ++SG + + +
Sbjct: 530 LLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNA------LTDTYAKSGDIEYSRTIFL 583
Query: 266 SMHEPHAGAWGALLGACKLHGDSDLGEIVANQL 298
M W +L+G LHG + NQ+
Sbjct: 584 GMETKDIITWNSLIGGYVLHGSYGPALALFNQM 616
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 182 bits (462), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 124/388 (31%), Positives = 206/388 (53%), Gaps = 47/388 (12%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNV----VSFTTMIDGYAKAGDMAAA 56
+ ++++ SWNA+L GF+++G A GVF AM + V + ++++ A +
Sbjct: 145 VEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQG 204
Query: 57 RFLFEQA--TEKD-VVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSAT 113
+ + T +D VV +A+IS Y G N+A+KV+ S NV DE +L SL+S
Sbjct: 205 KQVHAMVVVTGRDLVVLGTAMISFYSSVGLINEAMKVY---NSLNVHTDEVMLNSLISGC 261
Query: 114 SQLGHLELA------QWVDSYVSKSSI-------DL---QQDHVIA-------------A 144
+ + + A Q + V SS+ DL +Q H +A
Sbjct: 262 IRNRNYKEAFLLMSRQRPNVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKLCNG 321
Query: 145 LLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEG--LV 202
L+DM KCG + +A +F+ +P + +VS+ SMI +++G G A+ +F M EG ++
Sbjct: 322 LMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVL 381
Query: 203 PDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYE 262
P+ V F ++++AC+H+GLV EG F MK+KY + P +H+ C +D+LS++G + +
Sbjct: 382 PNSVTFLVVISACAHAGLVKEGKECFGMMKEKYRLVPGTEHYVCFIDILSKAGETEEIWR 441
Query: 263 LMKSMHEPH-----AGAWGALLGACKLHGDSDLGEIVANQLF-ELEPQNAANYILLSNIY 316
L++ M E W A+L AC L+ D GE VA +L E P+NA+ Y+L+SN Y
Sbjct: 442 LVERMMENDNQSIPCAIWVAVLSACSLNMDLTRGEYVARRLMEETGPENASIYVLVSNFY 501
Query: 317 AAAERWIDVSLVRSRMRERSVQKIPGCS 344
AA +W V +R +++ + + K G S
Sbjct: 502 AAMGKWDVVEELRGKLKNKGLVKTAGHS 529
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 122/255 (47%), Gaps = 9/255 (3%)
Query: 34 EKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLE 93
E +S T +ID Y+K G + + +FE EKD+V+W+AL+SG+++NG+ +AL VF
Sbjct: 116 ETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAA 175
Query: 94 MESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCG 153
M + V+ EF L S++ + L L+ + V + V + DL + A++ + G
Sbjct: 176 MYRERVEISEFTLSSVVKTCASLKILQQGKQVHAMVVVTGRDLVV--LGTAMISFYSSVG 233
Query: 154 NMDRALKLFKEMP-KRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIIL 212
++ A+K++ + D V S+I G + ++A +LM P+ + L
Sbjct: 234 LINEAMKVYNSLNVHTDEVMLNSLISGCIRNRNYKEAF-----LLMSRQRPNVRVLSSSL 288
Query: 213 TACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHA 272
CS + + G + + G ++D+ + G + A + +++
Sbjct: 289 AGCSDNSDLWIG-KQIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSV 347
Query: 273 GAWGALLGACKLHGD 287
+W +++ A ++GD
Sbjct: 348 VSWTSMIDAYAVNGD 362
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/209 (21%), Positives = 106/209 (50%), Gaps = 14/209 (6%)
Query: 16 FVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALI 75
F++ G+++ + N+V I +A D LF++ ++D+ + ++ +
Sbjct: 10 FIRLGNVT--------VKSTNLVLRCVFIRNFATHAD-----HLFDELPQRDLSSLNSQL 56
Query: 76 SGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSID 135
S ++++G PN L +FL++ + ++ A S L + E + V + + K +
Sbjct: 57 SSHLRSGNPNDTLALFLQIHRASPDLSSHTFTPVLGACSLLSYPETGRQVHALMIKQGAE 116
Query: 136 LQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNS 195
AL+DM +K G++ ++++F+ + ++DLVS+ +++ G +G G++A+ +F +
Sbjct: 117 TGTISK-TALIDMYSKYGHLVDSVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAA 175
Query: 196 MLMEGLVPDEVAFTIILTACSHSGLVDEG 224
M E + E + ++ C+ ++ +G
Sbjct: 176 MYRERVEISEFTLSSVVKTCASLKILQQG 204
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 179 bits (453), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 99/302 (32%), Positives = 168/302 (55%), Gaps = 2/302 (0%)
Query: 34 EKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLE 93
E + + + ++D +A G++ A LF + KD++A+S LI G V++G + A +F E
Sbjct: 374 ELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRE 433
Query: 94 MESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCG 153
+ + D+FI+ +++ S L L + + K + + AL+DM KCG
Sbjct: 434 LIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYE-SEPVTATALVDMYVKCG 492
Query: 154 NMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILT 213
+D + LF M +RD+VS+ +I G +G E+A R F+ M+ G+ P++V F +L+
Sbjct: 493 EIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEPNKVTFLGLLS 552
Query: 214 ACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMH-EPHA 272
AC HSGL++E + ++MK +YG+ P +H+ C+VDLL ++G +A EL+ M EP
Sbjct: 553 ACRHSGLLEEARSTLETMKSEYGLEPYLEHYYCVVDLLGQAGLFQEANELINKMPLEPDK 612
Query: 273 GAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWIDVSLVRSRM 332
W +LL AC H ++ L ++A +L + P + + Y LSN YA W +S VR
Sbjct: 613 TIWTSLLTACGTHKNAGLVTVIAEKLLKGFPDDPSVYTSLSNAYATLGMWDQLSKVREAA 672
Query: 333 RE 334
++
Sbjct: 673 KK 674
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 136/322 (42%), Gaps = 47/322 (14%)
Query: 1 MPQRNVASWNAMLCGFVKDGD---------LSSARGVFD--AMP---------------- 33
MPQ NV SWN ++ GFV G + V D A+P
Sbjct: 199 MPQPNVVSWNCLISGFVDKGSPRALEFLVRMQREGLVLDGFALPCGLKACSFGGLLTMGK 258
Query: 34 -----------EKNVVSFTTMIDGYAKAGDMAAARFLFEQ---ATEKDVVAWSALISGYV 79
E + + + +ID Y+ G + A +F Q A V W++++SG++
Sbjct: 259 QLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSGFL 318
Query: 80 QNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQD 139
N + AL + L++ ++ D + L + +L L V S V S +L D
Sbjct: 319 INEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVSGYEL--D 376
Query: 140 HVIAALL-DMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLM 198
+++ ++L D++A GN+ A KLF +P +D++++ +I+G G A LF ++
Sbjct: 377 YIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIK 436
Query: 199 EGLVPDEVAFTIILTACSHSGLVDEGW-NYFQSMKQKYGISPSPDHFACMVDLLSRSGHL 257
GL D+ + IL C S L GW + K G P +VD+ + G +
Sbjct: 437 LGLDADQFIVSNILKVC--SSLASLGWGKQIHGLCIKKGYESEPVTATALVDMYVKCGEI 494
Query: 258 GDAYELMKSMHEPHAGAWGALL 279
+ L M E +W ++
Sbjct: 495 DNGVVLFDGMLERDVVSWTGII 516
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 146/314 (46%), Gaps = 8/314 (2%)
Query: 5 NVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQAT 64
+V N+++ +VK+G L A F + + S+ T+I GY KAG M A LF +
Sbjct: 141 DVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVTLFHRMP 200
Query: 65 EKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQW 124
+ +VV+W+ LISG+V G P +AL+ + M+ + + D F L + A S G L + +
Sbjct: 201 QPNVVSWNCLISGFVDKGSP-RALEFLVRMQREGLVLDGFALPCGLKACSFGGLLTMGKQ 259
Query: 125 VDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLF---KEMPKRDLVSYCSMIQGLS 181
+ V KS ++ I+AL+DM + CG++ A +F K + + SM+ G
Sbjct: 260 LHCCVVKSGLE-SSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSGFL 318
Query: 182 IHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSP 241
I+ E A+ L + L D + L C + + G S+ G
Sbjct: 319 INEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQ-VHSLVVVSGYELDY 377
Query: 242 DHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHGDSDLGEIVANQLFEL 301
+ +VDL + G++ DA++L + A+ L+ C G + L + +L +L
Sbjct: 378 IVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKL 437
Query: 302 EPQNAANYILLSNI 315
A+ ++SNI
Sbjct: 438 GLD--ADQFIVSNI 449
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 123/284 (43%), Gaps = 15/284 (5%)
Query: 4 RNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQA 63
+NV N ++ +V LS A VFD M E+N+V++TTM+ GY G A L+ +
Sbjct: 38 QNVFIANNVISMYVDFRLLSDAHKVFDEMSERNIVTWTTMVSGYTSDGKPNKAIELYRRM 97
Query: 64 TEKDVVA-----WSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGH 118
+ + A +SA++ G + V+ + +N++ D ++ S++ + G
Sbjct: 98 LDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIGKENLRGDVVLMNSVVDMYVKNGR 157
Query: 119 LELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQ 178
L +++ S I L+ K G MD A+ LF MP+ ++VS+ +I
Sbjct: 158 L-----IEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVTLFHRMPQPNVVSWNCLIS 212
Query: 179 GLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGIS 238
G G A+ M EGLV D A L ACS GL+ G K G+
Sbjct: 213 GFVDKG-SPRALEFLVRMQREGLVLDGFALPCGLKACSFGGLLTMG-KQLHCCVVKSGLE 270
Query: 239 PSPDHFACMVDLLSRSGHL---GDAYELMKSMHEPHAGAWGALL 279
SP + ++D+ S G L D + K W ++L
Sbjct: 271 SSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSML 314
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 175 bits (443), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 96/354 (27%), Positives = 193/354 (54%), Gaps = 15/354 (4%)
Query: 3 QRNVASWNAMLCGFVKDGDLSSARGVFDAMPEK----NVVSFTTMIDGYAKAGDMAAARF 58
++++ WN +L + + G A +F M + NV+++ +I + G + A+
Sbjct: 438 EKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKD 497
Query: 59 LFEQATEK----DVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATS 114
+F Q ++++W+ +++G VQNG +A+ +M+ ++P+ F + +SA +
Sbjct: 498 MFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACA 557
Query: 115 QLGHLELAQWVDSYVSKSSIDLQQDHVIA---ALLDMNAKCGNMDRALKLFKEMPKRDLV 171
L L + + + Y+ + +LQ +++ +L+DM AKCG++++A K+F +L
Sbjct: 558 HLASLHIGRTIHGYIIR---NLQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLYSELP 614
Query: 172 SYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSM 231
+MI +++G ++A+ L+ S+ GL PD + T +L+AC+H+G +++ F +
Sbjct: 615 LSNAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQAIEIFTDI 674
Query: 232 KQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSM-HEPHAGAWGALLGACKLHGDSDL 290
K + P +H+ MVDLL+ +G A L++ M +P A +L+ +C ++L
Sbjct: 675 VSKRSMKPCLEHYGLMVDLLASAGETEKALRLIEEMPFKPDARMIQSLVASCNKQRKTEL 734
Query: 291 GEIVANQLFELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQKIPGCS 344
+ ++ +L E EP+N+ NY+ +SN YA W +V +R M+ + ++K PGCS
Sbjct: 735 VDYLSRKLLESEPENSGNYVTISNAYAVEGSWDEVVKMREMMKAKGLKKKPGCS 788
Score = 131 bits (329), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 98/345 (28%), Positives = 170/345 (49%), Gaps = 52/345 (15%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAM------PEKNVVSF-------------- 40
+P RN +WNA++ G+V++G A +F M P + VS
Sbjct: 234 IPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEG 293
Query: 41 -------------------TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQN 81
T++++ Y K G + A +F++ EKDVV W+ +ISGYVQ
Sbjct: 294 KQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQ 353
Query: 82 GQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHV 141
G A+ + M + +K D L +LMSA ++ +L+L + V Y + S + D V
Sbjct: 354 GLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHS--FESDIV 411
Query: 142 IAA-LLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEG 200
+A+ ++DM AKCG++ A K+F ++DL+ + +++ + G +A+RLF M +EG
Sbjct: 412 LASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEG 471
Query: 201 LVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDA 260
+ P+ + + +I+ + +G VDE + F M Q GI P+ + M++ + ++G +A
Sbjct: 472 VPPNVITWNLIILSLLRNGQVDEAKDMFLQM-QSSGIIPNLISWTTMMNGMVQNGCSEEA 530
Query: 261 YELMKSMHE----PHAGAWGALLGAC----KLH-GDSDLGEIVAN 296
++ M E P+A + L AC LH G + G I+ N
Sbjct: 531 ILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRN 575
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 116/222 (52%), Gaps = 7/222 (3%)
Query: 9 WNAMLCGFVKDGDLSSARGVFDAMPE------KNVVSFTTMIDGYAKAGDMAAARFLFEQ 62
+ +L G V + DLS+ + + + + +N T ++ YAK + A LF +
Sbjct: 73 YGEILQGCVYERDLSTGKQIHARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSK 132
Query: 63 ATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELA 122
++V +W+A+I + G AL F+EM + PD F++ ++ A L
Sbjct: 133 LRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFG 192
Query: 123 QWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSI 182
+ V YV KS ++ V ++L DM KCG +D A K+F E+P R+ V++ +++ G
Sbjct: 193 RGVHGYVVKSGLE-DCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQ 251
Query: 183 HGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEG 224
+G E+A+RLF+ M +G+ P V + L+A ++ G V+EG
Sbjct: 252 NGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEG 293
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/256 (21%), Positives = 106/256 (41%), Gaps = 20/256 (7%)
Query: 29 FDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQAL 88
F+ +P K V F+ +K D EQA ++ +S +NG+ +AL
Sbjct: 6 FNTIPNK--VPFSVSSKPSSKHHD--------EQAHSPSSTSYFHRVSSLCKNGEIKEAL 55
Query: 89 KVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSS-IDLQQDHVIAALLD 147
+ EM+ +N++ I ++ L + + + + K+ + +++ L+
Sbjct: 56 SLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQIHARILKNGDFYARNEYIETKLVI 115
Query: 148 MNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVA 207
AKC ++ A LF ++ R++ S+ ++I G E A+ F ML + PD
Sbjct: 116 FYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFV 175
Query: 208 FTIILTACSHSGLVDEGWNYFQSMKQKY----GISPSPDHFACMVDLLSRSGHLGDAYEL 263
+ AC W+ F Y G+ + + D+ + G L DA ++
Sbjct: 176 VPNVCKACGAL-----KWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKV 230
Query: 264 MKSMHEPHAGAWGALL 279
+ + +A AW AL+
Sbjct: 231 FDEIPDRNAVAWNALM 246
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 174 bits (442), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 103/304 (33%), Positives = 173/304 (56%), Gaps = 16/304 (5%)
Query: 43 MIDGYAKAGDMAAARFLFEQAT-EKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKP 101
+I+ + K +AAA LF++ EK V+W+ +++GY+ +GQ +A+ F +M+ + +P
Sbjct: 543 LINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQP 602
Query: 102 DEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKL 161
+ V+++ A ++L L + V S + + Q V +L+DM AKCG ++ + K
Sbjct: 603 NAVTFVNIVRAAAELSALRVGMSVHSSLIQCGF-CSQTPVGNSLVDMYAKCGMIESSEKC 661
Query: 162 FKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLV 221
F E+ + +VS+ +M+ + HG AV LF SM L PD V+F +L+AC H+GLV
Sbjct: 662 FIEISNKYIVSWNTMLSAYAAHGLASCAVSLFLSMQENELKPDSVSFLSVLSACRHAGLV 721
Query: 222 DEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMH-EPHAGAWGALLG 280
+EG F+ M +++ I +H+ACMVDLL ++G G+A E+M+ M + G WGALL
Sbjct: 722 EEGKRIFEEMGERHKIEAEVEHYACMVDLLGKAGLFGEAVEMMRRMRVKTSVGVWGALLN 781
Query: 281 ACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQKI 340
+ ++H + L QL +LEP N ++ Y+ R +V+ V SR ++K+
Sbjct: 782 SSRMHCNLWLSNAALCQLVKLEPLNPSH-------YSQDRRLGEVNNV-SR-----IKKV 828
Query: 341 PGCS 344
P CS
Sbjct: 829 PACS 832
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 154/312 (49%), Gaps = 20/312 (6%)
Query: 20 GDLSSARGVFDAMPEKNVVS----FTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALI 75
GDL + D ++ ++ T+++ Y+K G++ A LF ++DVV+WSA+I
Sbjct: 314 GDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMI 373
Query: 76 SGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSID 135
+ Y Q GQ ++A+ +F +M ++KP+ L S++ + + L + + Y K+ I+
Sbjct: 374 ASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIE 433
Query: 136 LQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNS 195
+ + A++ M AKCG ALK F+ +P +D V++ ++ QG + G A ++ +
Sbjct: 434 SELE-TATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKN 492
Query: 196 MLMEGLVPDEVAFTIILTACSHSGLVDEG-WNYFQSMKQKYGISPSPDHFA-CMVDLLSR 253
M + G+ PD +L C+ G Y Q +K + S H A ++++ ++
Sbjct: 493 MKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGF---DSECHVAHALINMFTK 549
Query: 254 SGHLGDAYELM-KSMHEPHAGAWGALLGACKLHGDSDLGEIVAN----QLFELEPQNAAN 308
L A L K E +W ++ LHG ++ E VA ++ + +P NA
Sbjct: 550 CDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAE--EAVATFRQMKVEKFQP-NAVT 606
Query: 309 YILLSNIYAAAE 320
++ + + AAAE
Sbjct: 607 FVNI--VRAAAE 616
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 143/324 (44%), Gaps = 44/324 (13%)
Query: 6 VASWNAMLCGFVKDGDLSSARGVFDAM-------PEKNVVSF------------------ 40
V WN+M+ G+ + G A G F M P+K +F
Sbjct: 64 VVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKKGLRIH 123
Query: 41 ---------------TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPN 85
T +++ Y KA D+ +AR +F++ KDVV W+ ++SG QNG +
Sbjct: 124 DLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSS 183
Query: 86 QALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAAL 145
AL +F +M S V D L +L+ A S+L ++ + + V K + L
Sbjct: 184 AALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFIFAFS---SGL 240
Query: 146 LDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDE 205
+DM C ++ A +F+E+ ++D S+ +M+ + +G E+ + LF+ M + ++
Sbjct: 241 IDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNK 300
Query: 206 VAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMK 265
VA L A ++ G + +G Q+ G+ ++ + S+ G L A +L
Sbjct: 301 VAAASALQAAAYVGDLVKGIAIHDYAVQQ-GLIGDVSVATSLMSMYSKCGELEIAEQLFI 359
Query: 266 SMHEPHAGAWGALLGACKLHGDSD 289
++ + +W A++ + + G D
Sbjct: 360 NIEDRDVVSWSAMIASYEQAGQHD 383
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Query: 43 MIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEM-ESKNVKP 101
+I+ Y+ +R +F+ + VV W+++I GY + G +AL F M E K + P
Sbjct: 39 LINAYSLFQRQDLSRVIFDSVRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDP 98
Query: 102 DEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQD-HVIAALLDMNAKCGNMDRALK 160
D++ + A + G ++ + + + + + L+ D ++ AL++M K ++ A +
Sbjct: 99 DKYSFTFALKACA--GSMDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQ 156
Query: 161 LFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACS 216
+F +M +D+V++ +M+ GL+ +GC A+ LF+ M + D V+ ++ A S
Sbjct: 157 VFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVS 212
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 89/203 (43%), Gaps = 41/203 (20%)
Query: 3 QRNVASWNAMLCGFVKDGDLSSARGVFDAMP----EKNVVSFT----------------- 41
+++ SWN M+ G++ G A F M + N V+F
Sbjct: 566 EKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMS 625
Query: 42 ------------------TMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQ 83
+++D YAK G + ++ F + + K +V+W+ ++S Y +G
Sbjct: 626 VHSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTMLSAYAAHGL 685
Query: 84 PNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWV-DSYVSKSSIDLQQDHVI 142
+ A+ +FL M+ +KPD +S++SA G +E + + + + I+ + +H
Sbjct: 686 ASCAVSLFLSMQENELKPDSVSFLSVLSACRHAGLVEEGKRIFEEMGERHKIEAEVEHY- 744
Query: 143 AALLDMNAKCGNMDRALKLFKEM 165
A ++D+ K G A+++ + M
Sbjct: 745 ACMVDLLGKAGLFGEAVEMMRRM 767
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 173 bits (438), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 96/302 (31%), Positives = 168/302 (55%), Gaps = 6/302 (1%)
Query: 42 TMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKP 101
++I Y++ D+ A +F+Q + W+++ISG+ N + + + EM P
Sbjct: 362 SLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHP 421
Query: 102 DEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIA--ALLDMNAKCGNMDRAL 159
+ L S++ +++G+L+ + Y+ + +D +I +L+DM AK G + A
Sbjct: 422 NHITLASILPLFARVGNLQHGKEFHCYILRR--QSYKDCLILWNSLVDMYAKSGEIIAAK 479
Query: 160 KLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSG 219
++F M KRD V+Y S+I G G GE A+ F M G+ PD V +L+ACSHS
Sbjct: 480 RVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSN 539
Query: 220 LVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSM-HEPHAGAWGAL 278
LV EG F M+ +GI +H++CMVDL R+G+L A ++ ++ +EP + L
Sbjct: 540 LVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATL 599
Query: 279 LGACKLHGDSDLGEIVANQ-LFELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSV 337
L AC +HG++++GE A++ L E +P++ +Y+LL+++YA W + V++ + + V
Sbjct: 600 LKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAVTGSWSKLVTVKTLLSDLGV 659
Query: 338 QK 339
QK
Sbjct: 660 QK 661
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/280 (22%), Positives = 130/280 (46%), Gaps = 5/280 (1%)
Query: 5 NVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQ-- 62
N+ NA++ + + G + AR +FD M E++ VS+ +I+ Y + A L ++
Sbjct: 218 NLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMY 277
Query: 63 --ATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLE 120
E +V W+ + G ++ G AL + M + NV+ +++ + A S +G L+
Sbjct: 278 LSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALK 337
Query: 121 LAQWVDSYVSKS-SIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQG 179
+ V +S S D+V +L+ M ++C ++ A +F+++ L ++ S+I G
Sbjct: 338 WGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISG 397
Query: 180 LSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISP 239
+ + E+ L ML+ G P+ + IL + G + G + + ++
Sbjct: 398 FAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKD 457
Query: 240 SPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALL 279
+ +VD+ ++SG + A + SM + + +L+
Sbjct: 458 CLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLI 497
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 86/150 (57%), Gaps = 3/150 (2%)
Query: 37 VVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMES 96
++ + +++D YAK+G++ AA+ +F+ ++D V +++LI GY + G+ AL F +M+
Sbjct: 459 LILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDR 518
Query: 97 KNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKS-SIDLQQDHVIAALLDMNAKCGNM 155
+KPD +V+++SA S + W+ + + I L+ +H + ++D+ + G +
Sbjct: 519 SGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHY-SCMVDLYCRAGYL 577
Query: 156 DRALKLFKEMPKRDLVSYC-SMIQGLSIHG 184
D+A +F +P + C ++++ IHG
Sbjct: 578 DKARDIFHTIPYEPSSAMCATLLKACLIHG 607
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 90/191 (47%), Gaps = 7/191 (3%)
Query: 29 FDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQAL 88
FD++ +V+F Y+ + A+ + E + + W+ LI Y++N + +++
Sbjct: 116 FDSVLVPKLVTF------YSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESV 169
Query: 89 KVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDM 148
V+ M SK ++ DEF S++ A + L + V + SS +V AL+ M
Sbjct: 170 SVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNL-YVCNALISM 228
Query: 149 NAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAF 208
+ G +D A +LF M +RD VS+ ++I + +A +L + M + G+ V +
Sbjct: 229 YKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTW 288
Query: 209 TIILTACSHSG 219
I C +G
Sbjct: 289 NTIAGGCLEAG 299
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 173 bits (438), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 96/302 (31%), Positives = 168/302 (55%), Gaps = 6/302 (1%)
Query: 42 TMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKP 101
++I Y++ D+ A +F+Q + W+++ISG+ N + + + EM P
Sbjct: 362 SLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHP 421
Query: 102 DEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIA--ALLDMNAKCGNMDRAL 159
+ L S++ +++G+L+ + Y+ + +D +I +L+DM AK G + A
Sbjct: 422 NHITLASILPLFARVGNLQHGKEFHCYILRR--QSYKDCLILWNSLVDMYAKSGEIIAAK 479
Query: 160 KLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSG 219
++F M KRD V+Y S+I G G GE A+ F M G+ PD V +L+ACSHS
Sbjct: 480 RVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSN 539
Query: 220 LVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSM-HEPHAGAWGAL 278
LV EG F M+ +GI +H++CMVDL R+G+L A ++ ++ +EP + L
Sbjct: 540 LVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATL 599
Query: 279 LGACKLHGDSDLGEIVANQ-LFELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSV 337
L AC +HG++++GE A++ L E +P++ +Y+LL+++YA W + V++ + + V
Sbjct: 600 LKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAVTGSWSKLVTVKTLLSDLGV 659
Query: 338 QK 339
QK
Sbjct: 660 QK 661
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/280 (22%), Positives = 130/280 (46%), Gaps = 5/280 (1%)
Query: 5 NVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQ-- 62
N+ NA++ + + G + AR +FD M E++ VS+ +I+ Y + A L ++
Sbjct: 218 NLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMY 277
Query: 63 --ATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLE 120
E +V W+ + G ++ G AL + M + NV+ +++ + A S +G L+
Sbjct: 278 LSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALK 337
Query: 121 LAQWVDSYVSKS-SIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQG 179
+ V +S S D+V +L+ M ++C ++ A +F+++ L ++ S+I G
Sbjct: 338 WGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISG 397
Query: 180 LSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISP 239
+ + E+ L ML+ G P+ + IL + G + G + + ++
Sbjct: 398 FAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKD 457
Query: 240 SPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALL 279
+ +VD+ ++SG + A + SM + + +L+
Sbjct: 458 CLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLI 497
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 86/150 (57%), Gaps = 3/150 (2%)
Query: 37 VVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMES 96
++ + +++D YAK+G++ AA+ +F+ ++D V +++LI GY + G+ AL F +M+
Sbjct: 459 LILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDR 518
Query: 97 KNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKS-SIDLQQDHVIAALLDMNAKCGNM 155
+KPD +V+++SA S + W+ + + I L+ +H + ++D+ + G +
Sbjct: 519 SGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHY-SCMVDLYCRAGYL 577
Query: 156 DRALKLFKEMPKRDLVSYC-SMIQGLSIHG 184
D+A +F +P + C ++++ IHG
Sbjct: 578 DKARDIFHTIPYEPSSAMCATLLKACLIHG 607
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 90/191 (47%), Gaps = 7/191 (3%)
Query: 29 FDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQAL 88
FD++ +V+F Y+ + A+ + E + + W+ LI Y++N + +++
Sbjct: 116 FDSVLVPKLVTF------YSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESV 169
Query: 89 KVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDM 148
V+ M SK ++ DEF S++ A + L + V + SS +V AL+ M
Sbjct: 170 SVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNL-YVCNALISM 228
Query: 149 NAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAF 208
+ G +D A +LF M +RD VS+ ++I + +A +L + M + G+ V +
Sbjct: 229 YKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTW 288
Query: 209 TIILTACSHSG 219
I C +G
Sbjct: 289 NTIAGGCLEAG 299
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 171 bits (432), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 112/386 (29%), Positives = 191/386 (49%), Gaps = 41/386 (10%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMP----EKNVVSFT--------------- 41
M NV SW ++ G V G + G+ M E NVV+ +
Sbjct: 387 MVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRV 446
Query: 42 --------------------TMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQN 81
+++D YA + + A + +D + +++L++ + +
Sbjct: 447 LEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNEL 506
Query: 82 GQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHV 141
G+ AL V M ++ D+ L +SA++ LG LE + + Y KS V
Sbjct: 507 GKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFS-GAASV 565
Query: 142 IAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGL 201
+ +L+DM +KCG+++ A K+F+E+ D+VS+ ++ GL+ +G A+ F M M+
Sbjct: 566 LNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGLASNGFISSALSAFEEMRMKET 625
Query: 202 VPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAY 261
PD V F I+L+ACS+ L D G YFQ MK+ Y I P +H+ +V +L R+G L +A
Sbjct: 626 EPDSVTFLILLSACSNGRLTDLGLEYFQVMKKIYNIEPQVEHYVHLVGILGRAGRLEEAT 685
Query: 262 ELMKSMH-EPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAE 320
++++MH +P+A + LL AC+ G+ LGE +AN+ L P + A YILL+++Y +
Sbjct: 686 GVVETMHLKPNAMIFKTLLRACRYRGNLSLGEDMANKGLALAPSDPALYILLADLYDESG 745
Query: 321 RWIDVSLVRSRMRERSVQKIPGCSKL 346
+ R+ M E+ + K G S +
Sbjct: 746 KPELAQKTRNLMTEKRLSKKLGKSTV 771
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 134/275 (48%), Gaps = 7/275 (2%)
Query: 43 MIDGYAK--AGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVK 100
++D Y K A ++ A+R +F +VV+W+ LI G V +G + +EM + V+
Sbjct: 366 LVDMYMKCSASEVEASR-VFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVE 424
Query: 101 PDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALK 160
P+ L ++ A S+L H+ + +Y+ + +D + V +L+D A +D A
Sbjct: 425 PNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMV-VGNSLVDAYASSRKVDYAWN 483
Query: 161 LFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGL 220
+ + M +RD ++Y S++ + G E A+ + N M +G+ D+++ ++A ++ G
Sbjct: 484 VIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGA 543
Query: 221 VDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLG 280
++ G + K G S + +VD+ S+ G L DA ++ + + P +W L+
Sbjct: 544 LETG-KHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVS 602
Query: 281 ACKLHG--DSDLGEIVANQLFELEPQNAANYILLS 313
+G S L ++ E EP + ILLS
Sbjct: 603 GLASNGFISSALSAFEEMRMKETEPDSVTFLILLS 637
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 99/182 (54%), Gaps = 2/182 (1%)
Query: 36 NVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEME 95
NVV T+++D Y++ M A + + E+DV W++++SG+V+N + +A+ FLEM
Sbjct: 258 NVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMR 317
Query: 96 SKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNM 155
S ++P+ F +++S S + L+ + + S K + D V AL+DM KC
Sbjct: 318 SLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTD-VGNALVDMYMKCSAS 376
Query: 156 D-RALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTA 214
+ A ++F M ++VS+ ++I GL HG +D L M+ + P+ V + +L A
Sbjct: 377 EVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRA 436
Query: 215 CS 216
CS
Sbjct: 437 CS 438
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 90/370 (24%), Positives = 152/370 (41%), Gaps = 49/370 (13%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMP--------------------------- 33
M R V +W M+ F K + +SA +F+ M
Sbjct: 84 MSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYG 143
Query: 34 ------------EKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQN 81
E N V +++ D Y+K G A LF D ++W+ +IS V
Sbjct: 144 GRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGA 203
Query: 82 GQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHV 141
+ +AL+ + EM V P+EF V L+ A+S LG LE + + S + I L +
Sbjct: 204 RKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLG-LEFGKTIHSNIIVRGIPLNVV-L 261
Query: 142 IAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGL 201
+L+D ++ M+ A+++ ++D+ + S++ G + ++AV F M GL
Sbjct: 262 KTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGL 321
Query: 202 VPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSR-SGHLGDA 260
P+ ++ IL+ CS +D G S K G S D +VD+ + S +A
Sbjct: 322 QPNNFTYSAILSLCSAVRSLDFG-KQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEA 380
Query: 261 YELMKSMHEPHAGAWGALLGACKLHG--DSDLGEIVANQLFELEPQNAANYILLSNIYAA 318
+ +M P+ +W L+ HG G ++ E+EP N + LS + A
Sbjct: 381 SRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEP----NVVTLSGVLRA 436
Query: 319 AERWIDVSLV 328
+ V V
Sbjct: 437 CSKLRHVRRV 446
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 120/269 (44%), Gaps = 5/269 (1%)
Query: 47 YAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFIL 106
Y K + AR LF++ + + V AW+ +IS + ++ + AL +F EM + P+EF
Sbjct: 68 YLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTF 127
Query: 107 VSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMP 166
S++ + + L + V V K+ + V ++L D+ +KCG A +LF +
Sbjct: 128 SSVVRSCAGLRDISYGGRVHGSVIKTGFE-GNSVVGSSLSDLYSKCGQFKEACELFSSLQ 186
Query: 167 KRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWN 226
D +S+ MI L +A++ ++ M+ G+ P+E F +L A S GL E
Sbjct: 187 NADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLGL--EFGK 244
Query: 227 YFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGAC--KL 284
S GI + +VD S+ + DA ++ S E W +++ L
Sbjct: 245 TIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNL 304
Query: 285 HGDSDLGEIVANQLFELEPQNAANYILLS 313
+G + + L+P N +LS
Sbjct: 305 RAKEAVGTFLEMRSLGLQPNNFTYSAILS 333
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 170 bits (430), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 92/244 (37%), Positives = 152/244 (62%), Gaps = 9/244 (3%)
Query: 10 NAMLCGFVKDGDLSSARGVFDAM-PEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDV 68
A+L K D+ SAR +F+ + ++N+V++ MI GY + GDM++AR LF+ +++V
Sbjct: 303 TALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNV 362
Query: 69 VAWSALISGYVQNGQPNQALKVFLEM-ESKNVKPDEFILVSLMSATSQLGHLELAQWVDS 127
V+W++LI+GY NGQ A++ F +M + + KPDE ++S++SA + LEL +
Sbjct: 363 VSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVD 422
Query: 128 YVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGE 187
Y+ K+ I L D +L+ M A+ GN+ A ++F EM +RD+VSY ++ + +G G
Sbjct: 423 YIRKNQIKLN-DSGYRSLIFMYARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGV 481
Query: 188 DAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACM 247
+ + L + M EG+ PD V +T +LTAC+ +GL+ EG F+S++ +P DH+ACM
Sbjct: 482 ETLNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRIFKSIR-----NPLADHYACM 536
Query: 248 VDLL 251
DLL
Sbjct: 537 -DLL 539
Score = 152 bits (384), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 101/320 (31%), Positives = 158/320 (49%), Gaps = 35/320 (10%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLF 60
+ QR + WN M+ G+ K G+ A +FD MPE +VVS+T MI G+AK D+ AR F
Sbjct: 162 ISQRKGSDWNVMISGYWKWGNKEEACKLFDMMPENDVVSWTVMITGFAKVKDLENARKYF 221
Query: 61 EQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLE 120
++ EK VV+W+A++SGY QNG AL++F +M V+P+E V ++SA S
Sbjct: 222 DRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPS 281
Query: 121 LAQWVDSYVSKSSIDLQQDHVIAALLDMNAKC---------------------------- 152
L + + + + + L V ALLDM+AKC
Sbjct: 282 LTRSLVKLIDEKRVRLNC-FVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISG 340
Query: 153 ----GNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEG-LVPDEVA 207
G+M A +LF MPKR++VS+ S+I G + +G A+ F M+ G PDEV
Sbjct: 341 YTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVT 400
Query: 208 FTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSM 267
+L+AC H ++ G + +K I + + ++ + +R G+L +A + M
Sbjct: 401 MISVLSACGHMADLELG-DCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEM 459
Query: 268 HEPHAGAWGALLGACKLHGD 287
E ++ L A +GD
Sbjct: 460 KERDVVSYNTLFTAFAANGD 479
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 104/239 (43%), Gaps = 19/239 (7%)
Query: 56 ARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQ 115
R +F+ T +V +++ + + N L+++ + + PD F ++ + +
Sbjct: 59 TRLIFDSVTFPNVFVVNSMFKYFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKSAGR 118
Query: 116 LGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCS 175
G L + V K + +V ++DM K +++ A K+F ++ +R +
Sbjct: 119 FGIL-----FQALVEKLGF-FKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNV 172
Query: 176 MIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKY 235
MI G G E+A +LF+ M+ E D V++T+++T + ++ YF M +K
Sbjct: 173 MISGYWKWGNKEEACKLFD-MMPEN---DVVSWTVMITGFAKVKDLENARKYFDRMPEKS 228
Query: 236 GISPSPDHFACMVDLLSRSGHLGDAYELMKSMH----EPHAGAWGALLGACKLHGDSDL 290
+S + M+ +++G DA L M P+ W ++ AC D L
Sbjct: 229 VVS-----WNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSL 282
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 169 bits (429), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 99/307 (32%), Positives = 173/307 (56%), Gaps = 12/307 (3%)
Query: 40 FTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNV 99
++ M++ Y + E + +D+VAW+ +I+ + P +A+ +F ++ + +
Sbjct: 312 YSEMLEDYTDC-----YKLFMEMSHCRDIVAWNGIITAFAVY-DPERAIHLFGQLRQEKL 365
Query: 100 KPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRAL 159
PD + S++ A + L A + + V K L + +L+ AKCG++D +
Sbjct: 366 SPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGF-LADTVLNNSLIHAYAKCGSLDLCM 424
Query: 160 KLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSG 219
++F +M RD+VS+ SM++ S+HG + + +F M + PD F +L+ACSH+G
Sbjct: 425 RVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKM---DINPDSATFIALLSACSHAG 481
Query: 220 LVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSM-HEPHAGAWGAL 278
V+EG F+SM +K P +H+AC++D+LSR+ +A E++K M +P A W AL
Sbjct: 482 RVEEGLRIFRSMFEKPETLPQLNHYACVIDMLSRAERFAEAEEVIKQMPMDPDAVVWIAL 541
Query: 279 LGACKLHGDSDLGEIVANQLFEL-EPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSV 337
LG+C+ HG++ LG++ A++L EL EP N+ +YI +SNIY A + + +L M V
Sbjct: 542 LGSCRKHGNTRLGKLAADKLKELVEPTNSMSYIQMSNIYNAEGSFNEANLSIKEMETWRV 601
Query: 338 QKIPGCS 344
+K P S
Sbjct: 602 RKEPDLS 608
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 89/363 (24%), Positives = 147/363 (40%), Gaps = 59/363 (16%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAM---------------------PEKNVVS 39
MP+RNV SW A++ G+V+ G+ +F +M P K V
Sbjct: 122 MPERNVVSWTALITGYVQAGNEQEGFCLFSSMLSHCFPNEFTLSSVLTSCRYEPGKQVHG 181
Query: 40 F-------------TTMIDGYAKAGDMAAAR---FLFEQATEKDVVAWSALISGYVQNGQ 83
+I Y + D AAA +FE K++V W+++I+ +
Sbjct: 182 LALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIKFKNLVTWNSMIAAFQCCNL 241
Query: 84 PNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQ------ 137
+A+ VF+ M S V D L+++ S+ + L V + VSK + L
Sbjct: 242 GKKAIGVFMRMHSDGVGFDRATLLNICSSLYKSSDL-----VPNEVSKCCLQLHSLTVKS 296
Query: 138 ----QDHVIAALLDMNAK-CGNMDRALKLFKEMPK-RDLVSYCSMIQGLSIHGCGEDAVR 191
Q V AL+ + ++ + KLF EM RD+V++ +I +++ E A+
Sbjct: 297 GLVTQTEVATALIKVYSEMLEDYTDCYKLFMEMSHCRDIVAWNGIITAFAVYD-PERAIH 355
Query: 192 LFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNY-FQSMKQKYGISPSPDHFACMVDL 250
LF + E L PD F+ +L AC +GLV + K G ++
Sbjct: 356 LFGQLRQEKLSPDWYTFSSVLKAC--AGLVTARHALSIHAQVIKGGFLADTVLNNSLIHA 413
Query: 251 LSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYI 310
++ G L + M +W ++L A LHG D + Q ++ P +A
Sbjct: 414 YAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVD-SILPVFQKMDINPDSATFIA 472
Query: 311 LLS 313
LLS
Sbjct: 473 LLS 475
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 94/185 (50%), Gaps = 12/185 (6%)
Query: 35 KNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEM 94
+NV+ +I+ YAK G++ AR +F+ E++VV+W+ALI+GYVQ G + +F M
Sbjct: 94 QNVILANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSM 153
Query: 95 ESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGN 154
S + P+EF L S++++ E + V K + +V A++ M +C +
Sbjct: 154 LS-HCFPNEFTLSSVLTSC----RYEPGKQVHGLALKLGLHCSI-YVANAVISMYGRCHD 207
Query: 155 ---MDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTII 211
A +F+ + ++LV++ SMI G+ A+ +F M +G+ D +
Sbjct: 208 GAAAYEAWTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRAT---L 264
Query: 212 LTACS 216
L CS
Sbjct: 265 LNICS 269
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 169 bits (427), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 105/349 (30%), Positives = 184/349 (52%), Gaps = 6/349 (1%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLF 60
M +++ SWNA++ ++G L F MP + V++ +ID + K+GD A +
Sbjct: 218 MEEKDTVSWNAIVASCSRNGKLELGLWFFHQMPNPDTVTYNELIDAFVKSGDFNNAFQVL 277
Query: 61 EQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLE 120
+ +W+ +++GYV + + +A + F +M S V+ DE+ L +++A + L +
Sbjct: 278 SDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAAVAALAVVP 337
Query: 121 LAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGL 180
+ + K +D + V +AL+DM +KCG + A +F MP+++L+ + MI G
Sbjct: 338 WGSLIHACAHKLGLD-SRVVVASALIDMYSKCGMLKHAELMFWTMPRKNLIVWNEMISGY 396
Query: 181 SIHGCGEDAVRLFNSMLMEG-LVPDEVAFTIILTACSHSGL-VDEGWNYFQSMKQKYGIS 238
+ +G +A++LFN + E L PD F +L CSH + ++ YF+ M +Y I
Sbjct: 397 ARNGDSIEAIKLFNQLKQERFLKPDRFTFLNLLAVCSHCEVPMEVMLGYFEMMINEYRIK 456
Query: 239 PSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAG-AWGALLGACKLHGDSDLGEIVANQ 297
PS +H ++ + + G + A ++++ + G AW ALLGAC D + VA +
Sbjct: 457 PSVEHCCSLIRAMGQRGEVWQAKQVIQEFGFGYDGVAWRALLGACSARKDLKAAKTVAAK 516
Query: 298 LFEL--EPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQKIPGCS 344
+ EL ++ YI++SN+YA ERW +V +R MRE V K G S
Sbjct: 517 MIELGDADKDEYLYIVMSNLYAYHERWREVGQIRKIMRESGVLKEVGSS 565
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 130/268 (48%), Gaps = 52/268 (19%)
Query: 20 GDLSSARGVFDAMPEKNVVSFT----TMIDGYAKAGDMAAARFLFEQATEKDVVAWSALI 75
G +S R + + + VS T +++ Y + + A +F++ + DV++W++L+
Sbjct: 69 GYVSLCRQLHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLV 128
Query: 76 SGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSID 135
SGYVQ+G+ + + +FLE+ +V P+EF + ++A ++L L + S + K +
Sbjct: 129 SGYVQSGRFQEGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVK--LG 186
Query: 136 LQQDHVIAA--LLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLF 193
L++ +V+ L+DM KCG MD A+ +F+ M ++D VS+
Sbjct: 187 LEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSW-------------------- 226
Query: 194 NSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPD--HFACMVDLL 251
I+ +CS +G ++ G +F M P+PD + ++D
Sbjct: 227 ---------------NAIVASCSRNGKLELGLWFFHQM-------PNPDTVTYNELIDAF 264
Query: 252 SRSGHLGDAYELMKSMHEPHAGAWGALL 279
+SG +A++++ M P++ +W +L
Sbjct: 265 VKSGDFNNAFQVLSDMPNPNSSSWNTIL 292
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 108/230 (46%), Gaps = 4/230 (1%)
Query: 70 AWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYV 129
+WS ++ + G L+ +E+ + KPD LV L+ + G++ L + + YV
Sbjct: 23 SWSTIVPALARFGSIG-VLRAAVELINDGEKPDASPLVHLLRVSGNYGYVSLCRQLHGYV 81
Query: 130 SKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDA 189
+K + + +L+ +++ A K+F EMP D++S+ S++ G G ++
Sbjct: 82 TKHGF-VSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEG 140
Query: 190 VRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFA-CMV 248
+ LF + + P+E +FT L AC+ L G S K G+ C++
Sbjct: 141 ICLFLELHRSDVFPNEFSFTAALAACARLHLSPLG-ACIHSKLVKLGLEKGNVVVGNCLI 199
Query: 249 DLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHGDSDLGEIVANQL 298
D+ + G + DA + + M E +W A++ +C +G +LG +Q+
Sbjct: 200 DMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQM 249
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 131/309 (42%), Gaps = 23/309 (7%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVF------DAMPEKNVVSFTTMIDGYAK----- 49
MP +V SWN+++ G+V+ G +F D P N SFT + A+
Sbjct: 116 MPDPDVISWNSLVSGYVQSGRFQEGICLFLELHRSDVFP--NEFSFTAALAACARLHLSP 173
Query: 50 AGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSL 109
G ++ + + +VV + LI Y + G + A+ VF ME K D ++
Sbjct: 174 LGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEK----DTVSWNAI 229
Query: 110 MSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRD 169
+++ S+ G LEL W + + L+D K G+ + A ++ +MP +
Sbjct: 230 VASCSRNGKLELGLWFFHQMPNPDTVTYNE-----LIDAFVKSGDFNNAFQVLSDMPNPN 284
Query: 170 LVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQ 229
S+ +++ G +A F M G+ DE + +I+L A + +V G +
Sbjct: 285 SSSWNTILTGYVNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAAVAALAVVPWG-SLIH 343
Query: 230 SMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHGDSD 289
+ K G+ + ++D+ S+ G L A + +M + W ++ +GDS
Sbjct: 344 ACAHKLGLDSRVVVASALIDMYSKCGMLKHAELMFWTMPRKNLIVWNEMISGYARNGDSI 403
Query: 290 LGEIVANQL 298
+ NQL
Sbjct: 404 EAIKLFNQL 412
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 166 bits (421), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 103/315 (32%), Positives = 166/315 (52%), Gaps = 8/315 (2%)
Query: 34 EKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLE 93
E++V TT++ Y K + +A+ +F+ E+DVV W+ +I G+ + G A++ F+E
Sbjct: 434 ERSVFVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIE 493
Query: 94 MESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCG 153
M + + D F L S++ A S + L + ++ D V AL+DM K G
Sbjct: 494 MYREKNRSDGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGFDCVMS-VCGALVDMYGKNG 552
Query: 154 NMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILT 213
+ A +F DL + SM+ S HG E A+ F +L G +PD V + +L
Sbjct: 553 KYETAETIFSLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLA 612
Query: 214 ACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEP--- 270
ACSH G +G + MK++ GI H++CMV+L+S++G + +A EL++ P
Sbjct: 613 ACSHRGSTLQGKFLWNQMKEQ-GIKAGFKHYSCMVNLVSKAGLVDEALELIE--QSPPGN 669
Query: 271 -HAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWIDVSLVR 329
A W LL AC + +G A Q+ +L+P++ A +ILLSN+YA RW DV+ +R
Sbjct: 670 NQAELWRTLLSACVNTRNLQIGLYAAEQILKLDPEDTATHILLSNLYAVNGRWEDVAEMR 729
Query: 330 SRMRERSVQKIPGCS 344
++R + K PG S
Sbjct: 730 RKIRGLASSKDPGLS 744
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 118/257 (45%), Gaps = 46/257 (17%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSS----------------ARGVFDAMPE---------- 34
MP RNV S+NA+ + ++ D +S F ++ +
Sbjct: 158 MPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTSLVQVCAVLEDVLM 217
Query: 35 --------------KNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQ 80
NVV T+++ Y+ GD+ +AR +F+ +D VAW+ +I G ++
Sbjct: 218 GSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSLK 277
Query: 81 NGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDS--YVSKSSIDLQQ 138
N + L F M V P +F +++ S+LG L + + + VS S DL
Sbjct: 278 NDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPL 337
Query: 139 DHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSML- 197
D+ ALLDM CG+M A +F + +LVS+ S+I G S +G GE A+ ++ +L
Sbjct: 338 DN---ALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLR 394
Query: 198 MEGLVPDEVAFTIILTA 214
M PDE F+ ++A
Sbjct: 395 MSTPRPDEYTFSAAISA 411
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 162 bits (409), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 82/248 (33%), Positives = 135/248 (54%), Gaps = 2/248 (0%)
Query: 36 NVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEME 95
+VV + Y++ G + L + D V+W+ I+ ++ + +++F M
Sbjct: 478 SVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHML 537
Query: 96 SKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNM 155
N++PD++ VS++S S+L L L + ++K+ V L+DM KCG++
Sbjct: 538 QSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCGSI 597
Query: 156 DRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTAC 215
+K+F+E +++L+++ ++I L IHG G++A+ F L G PD V+F ILTAC
Sbjct: 598 RSVMKVFEETREKNLITWTALISCLGIHGYGQEALEKFKETLSLGFKPDRVSFISILTAC 657
Query: 216 SHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEP-HAGA 274
H G+V EG FQ MK YG+ P DH+ C VDLL+R+G+L +A L++ M P A
Sbjct: 658 RHGGMVKEGMGLFQKMKD-YGVEPEMDHYRCAVDLLARNGYLKEAEHLIREMPFPADAPV 716
Query: 275 WGALLGAC 282
W L C
Sbjct: 717 WRTFLDGC 724
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 122/269 (45%), Gaps = 31/269 (11%)
Query: 42 TMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKP 101
++I Y K G+ A +F+ A D+V+W+A+I ++ P +ALK+F+ M P
Sbjct: 255 SLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEHGFSP 314
Query: 102 DEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIA-ALLDMNAKCGNMDRALK 160
++ VS++ +S + L + + + K+ + V+ AL+D AKCGN++ +
Sbjct: 315 NQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGC--ETGIVLGNALIDFYAKCGNLEDSRL 372
Query: 161 LFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACS---- 216
F + +++V + +++ G + G + LF ML G P E F+ L +C
Sbjct: 373 CFDYIRDKNIVCWNALLSGYANKD-GPICLSLFLQMLQMGFRPTEYTFSTALKSCCVTEL 431
Query: 217 ---HSGLVDEGWN----YFQSMKQKYGISPSPDHFACMVD----------------LLSR 253
HS +V G+ S+ + Y + + ++D + SR
Sbjct: 432 QQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAGIYSR 491
Query: 254 SGHLGDAYELMKSMHEPHAGAWGALLGAC 282
G ++ +L+ ++ +P +W + AC
Sbjct: 492 RGQYHESVKLISTLEQPDTVSWNIAIAAC 520
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/351 (23%), Positives = 139/351 (39%), Gaps = 73/351 (20%)
Query: 5 NVASWNAMLCGFVKDGDLSSARGVFDAMPE------------------------------ 34
++ SWNA++C K + A +F +MPE
Sbjct: 280 DIVSWNAIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIH 339
Query: 35 ----KN-----VVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPN 85
KN +V +ID YAK G++ +R F+ +K++V W+AL+SGY P
Sbjct: 340 GMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYANKDGP- 398
Query: 86 QALKVFLEMESKNVKPDEFI------------LVSLMSATSQLGHLELAQWVDSYVSKSS 133
L +FL+M +P E+ L L S ++G+ E +V S + +S
Sbjct: 399 ICLSLFLQMLQMGFRPTEYTFSTALKSCCVTELQQLHSVIVRMGY-EDNDYVLSSLMRSY 457
Query: 134 IDLQQDHVIAALLD----------------MNAKCGNMDRALKLFKEMPKRDLVSYCSMI 177
Q + LLD + ++ G ++KL + + D VS+ I
Sbjct: 458 AKNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAI 517
Query: 178 QGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGI 237
S E+ + LF ML + PD+ F IL+ CS + G + + K
Sbjct: 518 AACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLG-SSIHGLITKTDF 576
Query: 238 SPSPDHFAC--MVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHG 286
S D F C ++D+ + G + ++ + E + W AL+ +HG
Sbjct: 577 S-CADTFVCNVLIDMYGKCGSIRSVMKVFEETREKNLITWTALISCLGIHG 626
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 93/208 (44%), Gaps = 35/208 (16%)
Query: 10 NAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVV 69
N ++ + K G++S A VFD MPE+N VSF T+I GY+K GD+ A +F +
Sbjct: 53 NNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMR----- 107
Query: 70 AWSALISGYVQNGQPNQA-LKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSY 128
GY+ PNQ+ + L S +V+ A +QL L L
Sbjct: 108 -----YFGYL----PNQSTVSGLLSCASLDVR-----------AGTQLHGLSL------- 140
Query: 129 VSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGED 188
K + + V LL + + ++ A ++F++MP + L ++ M+ L G ++
Sbjct: 141 --KYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMMSLLGHRGFLKE 198
Query: 189 AVRLFNSMLMEGLVPDEVAFTIILTACS 216
+ F ++ G E +F +L S
Sbjct: 199 CMFFFRELVRMGASLTESSFLGVLKGVS 226
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 154 bits (390), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 93/305 (30%), Positives = 170/305 (55%), Gaps = 4/305 (1%)
Query: 44 IDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDE 103
ID ++K + + LF + + D V +++I Y + AL++F+ +++V+PD+
Sbjct: 277 IDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSYSWHCCGEDALRLFILAMTQSVRPDK 336
Query: 104 FILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFK 163
F S++S+ + + L+ V S V K DL V +L++M K G++D A+ +F
Sbjct: 337 FTFSSVLSSMNAV-MLDHGADVHSLVIKLGFDLDT-AVATSLMEMYFKTGSVDLAMGVFA 394
Query: 164 EMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLM-EGLVPDEVAFTIILTACSHSGLVD 222
+ +DL+ + ++I GL+ + +++ +FN +LM + L PD V IL AC ++G V+
Sbjct: 395 KTDGKDLIFWNTVIMGLARNSRAVESLAIFNQLLMNQSLKPDRVTLMGILVACCYAGFVN 454
Query: 223 EGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSM-HEPHAGAWGALLGA 281
EG F SM++ +G++P +H+AC+++LL R G + +A ++ + EP + W +L A
Sbjct: 455 EGIQIFSSMEKAHGVNPGNEHYACIIELLCRVGMINEAKDIADKIPFEPSSHIWEPILCA 514
Query: 282 CKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQKIP 341
GD+ L E VA + E EP+++ Y++L IY RW + +R M E ++
Sbjct: 515 SLDLGDTRLAETVAKTMLESEPKSSFPYLVLIKIYEMTWRWENSVKLRYAMNEHKLKSAQ 574
Query: 342 GCSKL 346
G SK+
Sbjct: 575 GSSKI 579
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 126/282 (44%), Gaps = 69/282 (24%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAG--------- 51
+P +N +WN L G K+G L++A +FD MPE++VVS+ TMI G G
Sbjct: 65 IPDKNTITWNVCLKGLFKNGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVF 124
Query: 52 ------DMAAARFLF-------------EQ---------ATEKDVVAWSALISGYVQNGQ 83
++ F F EQ + ++V W++++ Y + G
Sbjct: 125 FDMQRWEIRPTEFTFSILASLVTCVRHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGV 184
Query: 84 PNQALKVFLEMESKNV-------------------------------KPDEFILVSLMSA 112
+ AL VFL ME ++V +PDE+ + ++S
Sbjct: 185 FDYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSI 244
Query: 113 TSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVS 172
S L L + + K L V+ A +DM +KC +D ++KLF+E+ K D V
Sbjct: 245 CSDLRELSKGKQALALCIKMGF-LSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVL 303
Query: 173 YCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTA 214
SMI S H CGEDA+RLF + + + PD+ F+ +L++
Sbjct: 304 CNSMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVLSS 345
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 132/276 (47%), Gaps = 4/276 (1%)
Query: 10 NAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVV 69
N L + K G + +A +FD +P+KN +++ + G K G + A LF++ E+DVV
Sbjct: 43 NRCLQLYFKSGSVINALQLFDDIPDKNTITWNVCLKGLFKNGYLNNALDLFDEMPERDVV 102
Query: 70 AWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYV 129
+W+ +ISG V G ++VF +M+ ++P EF L S + + H + +
Sbjct: 103 SWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEFTFSILASLVTCVRH---GEQIHGNA 159
Query: 130 SKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDA 189
S + V +++DM + G D AL +F M RD+VS+ +I S G E A
Sbjct: 160 ICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVA 219
Query: 190 VRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVD 249
+ F M + PDE +++++ CS + +G ++ K G + +D
Sbjct: 220 LDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQAL-ALCIKMGFLSNSIVLGAGID 278
Query: 250 LLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLH 285
+ S+ L D+ +L + + + + +++G+ H
Sbjct: 279 MFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSYSWH 314
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 154 bits (389), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 104/340 (30%), Positives = 166/340 (48%), Gaps = 45/340 (13%)
Query: 1 MPQRNVASWNAMLCGFVKDGD--------------------------LSSARGVFDAMPE 34
MP+RN+ SWNAML G+V + L+ G+ D
Sbjct: 355 MPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMG 414
Query: 35 K-------------NVVSFTTMIDGYAKAGDMAAARFLFEQATE-KDVVAWSALISGYVQ 80
K NV+ ++D Y K G + +A F Q +E +D V+W+AL++G +
Sbjct: 415 KQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVAR 474
Query: 81 NGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDH 140
G+ QAL F M+ + KP ++ L +L++ + + L L + + ++ + + D
Sbjct: 475 VGRSEQALSFFEGMQVE-AKPSKYTLATLLAGCANIPALNLGKAIHGFLIRDGYKI--DV 531
Query: 141 VI-AALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLME 199
VI A++DM +KC D A+++FKE RDL+ + S+I+G +G ++ LF + E
Sbjct: 532 VIRGAMVDMYSKCRCFDYAIEVFKEAATRDLILWNSIIRGCCRNGRSKEVFELFMLLENE 591
Query: 200 GLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGD 259
G+ PD V F IL AC G V+ G+ YF SM KY ISP +H+ CM++L + G L
Sbjct: 592 GVKPDHVTFLGILQACIREGHVELGFQYFSSMSTKYHISPQVEHYDCMIELYCKYGCLHQ 651
Query: 260 AYELMKSM-HEPHAGAWGALLGACKLHGDSDLGEIVANQL 298
E + M +P + AC+ + S LG A +L
Sbjct: 652 LEEFLLLMPFDPPMQMLTRINDACQRYRWSKLGAWAAKRL 691
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 83/325 (25%), Positives = 154/325 (47%), Gaps = 20/325 (6%)
Query: 16 FVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALI 75
+VK L SAR VFD K++ S+T+ + GYA +G AR LF+ E+++V+W+A++
Sbjct: 308 YVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPERNIVSWNAML 367
Query: 76 SGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSID 135
GYV + ++AL M + D LV +++ S + +++ + ++ + D
Sbjct: 368 GGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFIYRHGYD 427
Query: 136 LQQDHVIA-ALLDMNAKCGNMDRALKLFKEMPK-RDLVSYCSMIQGLSIHGCGEDAVRLF 193
+ ++A ALLDM KCG + A F++M + RD VS+ +++ G++ G E A+ F
Sbjct: 428 --TNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQALSFF 485
Query: 194 NSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSR 253
M +E P + +L C++ ++ G + G MVD+ S+
Sbjct: 486 EGMQVEA-KPSKYTLATLLAGCANIPALNLG-KAIHGFLIRDGYKIDVVIRGAMVDMYSK 543
Query: 254 SGHLGDAYELMKSMHEPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLS 313
A E+ K W +++ C +G S ++FEL ++LL
Sbjct: 544 CRCFDYAIEVFKEAATRDLILWNSIIRGCCRNGRS-------KEVFEL-------FMLLE 589
Query: 314 NIYAAAERWIDVSLVRSRMRERSVQ 338
N + + ++++ +RE V+
Sbjct: 590 NEGVKPDHVTFLGILQACIREGHVE 614
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 123/275 (44%), Gaps = 48/275 (17%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNV----VSF---------------- 40
MP+R+ SWNA++ ++G +F M V SF
Sbjct: 122 MPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSCGLILDLRLL 181
Query: 41 -------------------TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQN 81
T+++D Y K M+ AR +F++ V+W+ ++ Y++
Sbjct: 182 RQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEM 241
Query: 82 GQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHV 141
G ++A+ +F +M NV+P + S+M A S+ LE+ + + + K S+ + V
Sbjct: 242 GFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSV-VADTVV 300
Query: 142 IAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGL 201
++ DM KC ++ A ++F + +DL S+ S + G ++ G +A LF+ L
Sbjct: 301 STSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFD------L 354
Query: 202 VPDE--VAFTIILTACSHSGLVDEGWNYFQSMKQK 234
+P+ V++ +L H+ DE ++ M+Q+
Sbjct: 355 MPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQE 389
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/295 (21%), Positives = 125/295 (42%), Gaps = 15/295 (5%)
Query: 33 PEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFL 92
P + I+ Y K G + AR LFE+ E+D +W+A+I+ QNG ++ ++F
Sbjct: 92 PLPPIFLLNRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFR 151
Query: 93 EMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSK----SSIDLQQDHVIAALLDM 148
M V+ E ++ + + L L + + V K ++DL+ +++D+
Sbjct: 152 RMNRDGVRATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLE-----TSIVDV 206
Query: 149 NAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAF 208
KC M A ++F E+ VS+ +++ G ++AV +F ML + P
Sbjct: 207 YGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTV 266
Query: 209 TIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMH 268
+ ++ ACS S ++ G ++ K + + D+ + L A +
Sbjct: 267 SSVMLACSRSLALEVG-KVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTR 325
Query: 269 EPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQ-NAANYILLSNIYAAAERW 322
+W + + + G + A +LF+L P+ N ++ + Y A W
Sbjct: 326 SKDLKSWTSAMSGYAMSGLTR----EARELFDLMPERNIVSWNAMLGGYVHAHEW 376
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 142 bits (358), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 102/393 (25%), Positives = 187/393 (47%), Gaps = 54/393 (13%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNV----------------------- 37
+ ++N ++NA++ GF ++G A +F M ++ V
Sbjct: 377 VTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAVDACGLVSEKKVS 436
Query: 38 -------VSF---------TTMIDGYAKAGDMAAARFLFEQ--ATEKDVVAWSALISGYV 79
+ F T ++D + MA A +F+Q + A +++I GY
Sbjct: 437 EQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQWPSNLDSSKATTSIIGGYA 496
Query: 80 QNGQPNQALKVF-LEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSK----SSI 134
+NG P++A+ +F + + + DE L +++ LG E+ + Y K S I
Sbjct: 497 RNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMGYQIHCYALKAGYFSDI 556
Query: 135 DLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFN 194
L +L+ M AKC + D A+K+F M + D++S+ S+I + G++A+ L++
Sbjct: 557 SLGN-----SLISMYAKCCDSDDAIKIFNTMREHDVISWNSLISCYILQRNGDEALALWS 611
Query: 195 SMLMEGLVPDEVAFTIILTACSH--SGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLS 252
M + + PD + T++++A + S + + F SMK Y I P+ +H+ V +L
Sbjct: 612 RMNEKEIKPDIITLTLVISAFRYTESNKLSSCRDLFLSMKTIYDIEPTTEHYTAFVRVLG 671
Query: 253 RSGHLGDAYELMKSMH-EPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYIL 311
G L +A + + SM +P ALL +C++H ++ + + VA + +P+ + YIL
Sbjct: 672 HWGLLEEAEDTINSMPVQPEVSVLRALLDSCRIHSNTSVAKRVAKLILSTKPETPSEYIL 731
Query: 312 LSNIYAAAERWIDVSLVRSRMRERSVQKIPGCS 344
SNIY+A+ W ++R MRER +K P S
Sbjct: 732 KSNIYSASGFWHRSEMIREEMRERGYRKHPAKS 764
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 140/284 (49%), Gaps = 7/284 (2%)
Query: 10 NAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVV 69
NA++ + K D+ +++ M ++ V+FT MI Y G + +A +F TEK+ +
Sbjct: 324 NALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANVTEKNTI 383
Query: 70 AWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYV 129
++AL++G+ +NG +ALK+F +M + V+ +F L S + A + ++++ + +
Sbjct: 384 TYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAVDACGLVSEKKVSEQIHGFC 443
Query: 130 SKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKR--DLVSYCSMIQGLSIHGCGE 187
K + ALLDM +C M A ++F + P + S+I G + +G +
Sbjct: 444 IKFGTAFNP-CIQTALLDMCTRCERMADAEEMFDQWPSNLDSSKATTSIIGGYARNGLPD 502
Query: 188 DAVRLFNSMLME-GLVPDEVAFTIILTACSHSGLVDEGWN-YFQSMKQKYGISPSPDHFA 245
AV LF+ L E L DEV+ T+IL C G + G+ + ++K Y S +
Sbjct: 503 KAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMGYQIHCYALKAGYFSDISLGN-- 560
Query: 246 CMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHGDSD 289
++ + ++ DA ++ +M E +W +L+ L + D
Sbjct: 561 SLISMYAKCCDSDDAIKIFNTMREHDVISWNSLISCYILQRNGD 604
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 93/186 (50%), Gaps = 5/186 (2%)
Query: 43 MIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKN-VKP 101
+I Y K G A +F + VV+++ALISG+ + +ALKVF M V+P
Sbjct: 120 LISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLVQP 179
Query: 102 DEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAK--CGNMDRAL 159
+E+ V++++A ++ L + + KS L V +L+ + K + D L
Sbjct: 180 NEYTFVAILTACVRVSRFSLGIQIHGLIVKSGF-LNSVFVSNSLMSLYDKDSGSSCDDVL 238
Query: 160 KLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSM-LMEGLVPDEVAFTIILTACSHS 218
KLF E+P+RD+ S+ +++ L G A LF M +EG D + +L++C+ S
Sbjct: 239 KLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDS 298
Query: 219 GLVDEG 224
++ G
Sbjct: 299 SVLLRG 304
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 107/239 (44%), Gaps = 36/239 (15%)
Query: 59 LFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMES-KNVKPDEFILVSLMSATSQ-- 115
LF++ ++DV +W+ ++S V+ G+ ++A +F EM + D F L +L+S+ +
Sbjct: 240 LFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSS 299
Query: 116 -----------------LGHLELAQWVDSYVSK----------SSIDLQQDHV-IAALLD 147
+ L + + + SK + + QD V ++
Sbjct: 300 VLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMIT 359
Query: 148 MNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVA 207
G +D A+++F + +++ ++Y +++ G +G G A++LF ML G+ + +
Sbjct: 360 AYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFS 419
Query: 208 FTIILTACSHSGLVDEGW--NYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELM 264
T + AC GLV E K+G + +P ++D+ +R + DA E+
Sbjct: 420 LTSAVDAC---GLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMF 475
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 85/282 (30%), Positives = 144/282 (51%), Gaps = 10/282 (3%)
Query: 41 TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVK 100
+ +ID Y K + + L++ ++ ++L++ + G +++F M +
Sbjct: 355 SALIDMYGKCNGIENSALLYQSLPCLNLECCNSLMTSLMHCGITKDIIEMFGLMIDEGTG 414
Query: 101 PDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDH-----VIAALLDMNAKCGNM 155
DE L +++ A S L L + + S ++ + V +L+D K G
Sbjct: 415 IDEVTLSTVLKALS----LSLPESLHSCTLVHCCAIKSGYAADVAVSCSLIDAYTKSGQN 470
Query: 156 DRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTAC 215
+ + K+F E+ ++ S+I G + +G G D V++ M L+PDEV +L+ C
Sbjct: 471 EVSRKVFDELDTPNIFCLTSIINGYARNGMGTDCVKMLREMDRMNLIPDEVTILSVLSGC 530
Query: 216 SHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYE-LMKSMHEPHAGA 274
SHSGLV+EG F S++ KYGISP +ACMVDLL R+G + A L+++ + A
Sbjct: 531 SHSGLVEEGELIFDSLESKYGISPGRKLYACMVDLLGRAGLVEKAERLLLQARGDADCVA 590
Query: 275 WGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIY 316
W +LL +C++H + +G A L LEP+N A YI +S Y
Sbjct: 591 WSSLLQSCRIHRNETIGRRAAEVLMNLEPENFAVYIQVSKFY 632
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 93/183 (50%)
Query: 36 NVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEME 95
N+ ++D Y+ GD++ + F EKDV++W++++S G +L +F +M+
Sbjct: 248 NIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVLDSLDLFSKMQ 307
Query: 96 SKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNM 155
+P +S ++ S+ ++ + + YV K D+ HV +AL+DM KC +
Sbjct: 308 FWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSALIDMYGKCNGI 367
Query: 156 DRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTAC 215
+ + L++ +P +L S++ L G +D + +F M+ EG DEV + +L A
Sbjct: 368 ENSALLYQSLPCLNLECCNSLMTSLMHCGITKDIIEMFGLMIDEGTGIDEVTLSTVLKAL 427
Query: 216 SHS 218
S S
Sbjct: 428 SLS 430
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 127/271 (46%), Gaps = 9/271 (3%)
Query: 22 LSSARGVFDAMPEKN----VVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISG 77
+++ R F + E+N V + ID K+G++ +A F++ + +DVV ++ LISG
Sbjct: 27 IATPRMDFSSFLEENPSDLVYTHNRRIDELIKSGNLLSAHEAFDEMSVRDVVTYNLLISG 86
Query: 78 YVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQ 137
+ G +A++++ EM S ++ S++S S L + + + S+
Sbjct: 87 NSRYGCSLRAIELYAEMVSCGLRESASTFPSVLSVCSD--ELFCREGIQVHCRVISLGFG 144
Query: 138 QDHVI-AALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSM 196
+ + +AL+ + A +D ALKLF EM R+L +++ G + ++ M
Sbjct: 145 CNMFVRSALVGLYACLRLVDVALKLFDEMLDRNLAVCNLLLRCFCQTGESKRLFEVYLRM 204
Query: 197 LMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFA-CMVDLLSRSG 255
+EG+ + + + ++ CSH LV EG S+ K G + S A +VD S G
Sbjct: 205 ELEGVAKNGLTYCYMIRGCSHDRLVYEG-KQLHSLVVKSGWNISNIFVANVLVDYYSACG 263
Query: 256 HLGDAYELMKSMHEPHAGAWGALLGACKLHG 286
L + ++ E +W +++ C +G
Sbjct: 264 DLSGSMRSFNAVPEKDVISWNSIVSVCADYG 294
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/189 (21%), Positives = 90/189 (47%)
Query: 36 NVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEME 95
N+ + ++ YA + A LF++ ++++ + L+ + Q G+ + +V+L ME
Sbjct: 146 NMFVRSALVGLYACLRLVDVALKLFDEMLDRNLAVCNLLLRCFCQTGESKRLFEVYLRME 205
Query: 96 SKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNM 155
+ V + ++ S + + + S V KS ++ V L+D + CG++
Sbjct: 206 LEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDL 265
Query: 156 DRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTAC 215
+++ F +P++D++S+ S++ + +G D++ LF+ M G P F L C
Sbjct: 266 SGSMRSFNAVPEKDVISWNSIVSVCADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFC 325
Query: 216 SHSGLVDEG 224
S + + G
Sbjct: 326 SRNSDIQSG 334
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 117 bits (294), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 139/303 (45%), Gaps = 46/303 (15%)
Query: 3 QRNVASWNAMLCGFVKDG-------------------DLSSARGVFDAMPE--------- 34
QRN SW A++ G+ +G D+ + V E
Sbjct: 380 QRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKE 439
Query: 35 -----------KNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQ 83
NV T+++ Y+K G LF++ +++V AW+A+I YV+N
Sbjct: 440 IHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCD 499
Query: 84 PNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIA 143
++VF M +PD + +++ S L L+L + + ++ K + V A
Sbjct: 500 LRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFE-SIPFVSA 558
Query: 144 ALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGE---DAVRLFNSMLMEG 200
++ M KCG++ A F + + +++ ++I+ +GC E DA+ F M+ G
Sbjct: 559 RIIKMYGKCGDLRSANFSFDAVAVKGSLTWTAIIEA---YGCNELFRDAINCFEQMVSRG 615
Query: 201 LVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDA 260
P+ FT +L+ CS +G VDE + +F M + Y + PS +H++ +++LL+R G + +A
Sbjct: 616 FTPNTFTFTAVLSICSQAGFVDEAYRFFNLMLRMYNLQPSEEHYSLVIELLNRCGRVEEA 675
Query: 261 YEL 263
L
Sbjct: 676 QRL 678
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 131/264 (49%), Gaps = 7/264 (2%)
Query: 17 VKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALIS 76
+K L+ G+F+++ K T+++D Y K G + AR +F++ E+D+V W A+I+
Sbjct: 234 LKTHALAIKNGLFNSVFLK-----TSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIA 288
Query: 77 GYVQNGQPNQALKVFLEMESK-NVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSID 135
G N + +AL +F M S+ + P+ IL +++ + L+L + V ++V KS
Sbjct: 289 GLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNY 348
Query: 136 LQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNS 195
++Q V + L+D+ KCG+M ++F +R+ +S+ +++ G + +G + A+R
Sbjct: 349 VEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVW 408
Query: 196 MLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSG 255
M EG PD V +L C+ + +G K P+ ++ + S+ G
Sbjct: 409 MQQEGFRPDVVTIATVLPVCAELRAIKQG-KEIHCYALKNLFLPNVSLVTSLMVMYSKCG 467
Query: 256 HLGDAYELMKSMHEPHAGAWGALL 279
L + + + AW A++
Sbjct: 468 VPEYPIRLFDRLEQRNVKAWTAMI 491
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/292 (22%), Positives = 129/292 (44%), Gaps = 8/292 (2%)
Query: 5 NVASWNAMLCGFVKDGDLSSARGVFDAMP----EKNVVSFTTMIDGYAKAGDMAAARFLF 60
N +++A+L V+ L + V + E N T ++ Y G + A+ +F
Sbjct: 110 NATTFSALLEACVRRKSLLHGKQVHVHIRINGLESNEFLRTKLVHMYTACGSVKDAQKVF 169
Query: 61 EQATEKDVVAWSALISGYVQNGQPN--QALKVFLEMESKNVKPDEFILVSLMSATSQLGH 118
+++T +V +W+AL+ G V +G+ L F EM V + + L ++ + +
Sbjct: 170 DESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLNVYSLSNVFKSFAGASA 229
Query: 119 LELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQ 178
L + K+ + + +L+DM KCG + A ++F E+ +RD+V + +MI
Sbjct: 230 LRQGLKTHALAIKNGL-FNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIA 288
Query: 179 GLSIHGCGEDAVRLFNSMLM-EGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGI 237
GL+ + +A+ LF +M+ E + P+ V T IL + G + +
Sbjct: 289 GLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNY 348
Query: 238 SPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHGDSD 289
P + ++DL + G + + + +A +W AL+ +G D
Sbjct: 349 VEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFD 400
>AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:10888102-10889949 FORWARD
LENGTH=615
Length = 615
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/230 (31%), Positives = 126/230 (54%), Gaps = 6/230 (2%)
Query: 77 GYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKS--SI 134
+ ++G+ +AL + S N D L+ L + L+ A+ V +S S +
Sbjct: 228 AFCKHGKVKKALYTIDILASMNYVVDLSRLLRLAKICGEAEGLQEAKTVHGKISASVSHL 287
Query: 135 DLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFN 194
DL +HV LL+M + CG + A +F++M +++L ++C +I+ + +G GEDA+ +F+
Sbjct: 288 DLSSNHV---LLEMYSNCGLANEAASVFEKMSEKNLETWCIIIRCFAKNGFGEDAIDMFS 344
Query: 195 SMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRS 254
EG +PD F I AC G VDEG +F+SM + YGI+PS + + +V++ +
Sbjct: 345 RFKEEGNIPDGQLFRGIFYACGMLGDVDEGLLHFESMSRDYGIAPSIEDYVSLVEMYALP 404
Query: 255 GHLGDAYELMKSM-HEPHAGAWGALLGACKLHGDSDLGEIVANQLFELEP 303
G L +A E ++ M EP+ W L+ ++HG+ +LG+ A + L+P
Sbjct: 405 GFLDEALEFVERMPMEPNVDVWETLMNLSRVHGNLELGDYCAEVVEFLDP 454
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 146/321 (45%), Gaps = 41/321 (12%)
Query: 1 MPQRNVASWNAMLCGFVKDG-----------------------------DLSSARGVFD- 30
MP++N +W AM+ G++K G +L S R F+
Sbjct: 143 MPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFEL 202
Query: 31 ---------AMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQN 81
+ N++ ++++ YA+ G++ +A F+ EKDV++W+A+IS +
Sbjct: 203 GRQVHGNMVKVGVGNLIVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRK 262
Query: 82 GQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHV 141
G +A+ +F+ M + P+EF + S++ A S+ L + V S V K I V
Sbjct: 263 GHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDV-FV 321
Query: 142 IAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGL 201
+L+DM AKCG + K+F M R+ V++ S+I + G GE+A+ LF M L
Sbjct: 322 GTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHL 381
Query: 202 VPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAY 261
+ + + IL AC G + G + K I + + +V L + G DA+
Sbjct: 382 IANNLTVVSILRACGSVGALLLG-KELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAF 440
Query: 262 ELMKSMHEPHAGAWGALLGAC 282
+++ + +W A++ C
Sbjct: 441 NVLQQLPSRDVVSWTAMISGC 461
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 139/252 (55%), Gaps = 2/252 (0%)
Query: 28 VFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQA 87
V M + +V T+++D YAK G+++ R +F+ + ++ V W+++I+ + + G +A
Sbjct: 310 VVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEA 369
Query: 88 LKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLD 147
+ +F M+ +++ + +VS++ A +G L L + + + + K+SI+ + ++ + L+
Sbjct: 370 ISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIE-KNVYIGSTLVW 428
Query: 148 MNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVA 207
+ KCG A + +++P RD+VS+ +MI G S G +A+ M+ EG+ P+
Sbjct: 429 LYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFT 488
Query: 208 FTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSM 267
++ L AC++S + G + K+ + +S A ++ + ++ G + +A+ + SM
Sbjct: 489 YSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSA-LIHMYAKCGFVSEAFRVFDSM 547
Query: 268 HEPHAGAWGALL 279
E + +W A++
Sbjct: 548 PEKNLVSWKAMI 559
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 101/182 (55%), Gaps = 1/182 (0%)
Query: 34 EKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLE 93
EKNV +T++ Y K G+ A + +Q +DVV+W+A+ISG G ++AL E
Sbjct: 417 EKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKE 476
Query: 94 MESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCG 153
M + V+P+ F S + A + L + + + S ++K + L V +AL+ M AKCG
Sbjct: 477 MIQEGVEPNPFTYSSALKACANSESLLIGRSIHS-IAKKNHALSNVFVGSALIHMYAKCG 535
Query: 154 NMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILT 213
+ A ++F MP+++LVS+ +MI G + +G +A++L M EG D+ F IL+
Sbjct: 536 FVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEVDDYIFATILS 595
Query: 214 AC 215
C
Sbjct: 596 TC 597
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 73/166 (43%), Gaps = 42/166 (25%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEK------------------------- 35
+P R+V SW AM+ G G S A M ++
Sbjct: 446 LPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIG 505
Query: 36 --------------NVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQN 81
NV + +I YAK G ++ A +F+ EK++V+W A+I GY +N
Sbjct: 506 RSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARN 565
Query: 82 GQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDS 127
G +ALK+ ME++ + D++I +++S G +EL + V+S
Sbjct: 566 GFCREALKLMYRMEAEGFEVDDYIFATILSTC---GDIELDEAVES 608
>AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15661092-15662705 FORWARD
LENGTH=537
Length = 537
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 109/184 (59%), Gaps = 2/184 (1%)
Query: 119 LELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQ 178
L+ A+ V +++ SS+ + ++++M + CG+++ AL +F MP+R+L ++C +I+
Sbjct: 197 LQEAKVVHEFIT-SSVGISDISAYNSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIR 255
Query: 179 GLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGIS 238
+ +G GEDA+ F+ EG PD F I AC G ++EG +F+SM ++YGI
Sbjct: 256 CFAKNGQGEDAIDTFSRFKQEGNKPDGEMFKEIFFACGVLGDMNEGLLHFESMYKEYGII 315
Query: 239 PSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHGDSDLGEIVANQL 298
P +H+ +V +L+ G+L +A ++SM EP+ W L+ ++HGD LG+ + +
Sbjct: 316 PCMEHYVSLVKMLAEPGYLDEALRFVESM-EPNVDLWETLMNLSRVHGDLILGDRCQDMV 374
Query: 299 FELE 302
+L+
Sbjct: 375 EQLD 378
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 95/214 (44%), Gaps = 26/214 (12%)
Query: 9 WNAMLCGFVKDGDLSSARGVFDAMPEK----NVVSFTTMIDGYAKAGDMAAARFLFEQAT 64
W A LCG + L A+ V + + ++ ++ ++I+ Y+ G + A +F
Sbjct: 186 WIAQLCGDAQA--LQEAKVVHEFITSSVGISDISAYNSIIEMYSGCGSVEDALTVFNSMP 243
Query: 65 EKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLE--LA 122
E+++ W +I + +NGQ A+ F + + KPD + + A LG + L
Sbjct: 244 ERNLETWCGVIRCFAKNGQGEDAIDTFSRFKQEGNKPDGEMFKEIFFACGVLGDMNEGLL 303
Query: 123 QWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEM-PKRDLVSYCSMIQGLS 181
+ Y I + +V +L+ M A+ G +D AL+ + M P DL + +++
Sbjct: 304 HFESMYKEYGIIPCMEHYV--SLVKMLAEPGYLDEALRFVESMEPNVDL--WETLMNLSR 359
Query: 182 IHG-------CGE-----DAVRLFNSMLMEGLVP 203
+HG C + DA RL N GLVP
Sbjct: 360 VHGDLILGDRCQDMVEQLDASRL-NKESKAGLVP 392
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 118/218 (54%), Gaps = 6/218 (2%)
Query: 92 LEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSI--DLQQDHVIAALLDMN 149
+E+ K PD V L + + L LE ++ V + +S D + ++++ + M
Sbjct: 225 IELLDKGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMV---ISMF 281
Query: 150 AKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFT 209
+C ++ A ++F M +D+ S+ M+ S +G G+DA+ LF M GL P+E F
Sbjct: 282 GECSSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFL 341
Query: 210 IILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSM-H 268
+ AC+ G ++E + +F SMK ++GISP +H+ ++ +L + GHL +A + ++ +
Sbjct: 342 TVFLACATVGGIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRDLPF 401
Query: 269 EPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNA 306
EP A W A+ +LHGD DL + + + +++P A
Sbjct: 402 EPTADFWEAMRNYARLHGDIDLEDYMEELMVDVDPSKA 439
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 66/125 (52%), Gaps = 2/125 (1%)
Query: 43 MIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPD 102
+I + + + A+ +F+ +KD+ +W ++ Y NG + AL +F EM +KP+
Sbjct: 277 VISMFGECSSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPN 336
Query: 103 EFILVSLMSATSQLGHLELA-QWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKL 161
E +++ A + +G +E A DS ++ I + +H + +L + KCG++ A +
Sbjct: 337 EETFLTVFLACATVGGIEEAFLHFDSMKNEHGISPKTEHYL-GVLGVLGKCGHLVEAEQY 395
Query: 162 FKEMP 166
+++P
Sbjct: 396 IRDLP 400
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 143/299 (47%), Gaps = 23/299 (7%)
Query: 5 NVASWNAMLCGFVKDGDLSSARGVFDAMPEKN----VVSFTTMIDGYAKAGDMAAARFLF 60
NV +N ++ F K+G++S A+ VFD + +++ VVSF T+I+GY K G++ L
Sbjct: 239 NVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLK 298
Query: 61 EQ----ATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQL 116
Q T DV +SALI+ + + + A +F EM + + P++ I +L+ S+
Sbjct: 299 HQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRN 358
Query: 117 GHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMD--RALKLFKEMPKR----DL 170
G ++L + +SY S LQ D V+ L +N C N D A + M +R D
Sbjct: 359 GEIDLMK--ESYQKMLSKGLQPDIVLYNTL-VNGFCKNGDLVAARNIVDGMIRRGLRPDK 415
Query: 171 VSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQS 230
++Y ++I G G E A+ + M G+ D V F+ ++ G V + +
Sbjct: 416 ITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALRE 475
Query: 231 MKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSM----HEPHAGAWGALL-GACKL 284
M + GI P + M+D + G ++L+K M H P + LL G CKL
Sbjct: 476 M-LRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKL 533
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 114/264 (43%), Gaps = 52/264 (19%)
Query: 3 QRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNV----VSFTTMIDGYAKAGDMAAA-- 56
Q ++ +N ++ GF K+GDL +AR + D M + + +++TT+IDG+ + GD+ A
Sbjct: 377 QPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALE 436
Query: 57 --RFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATS 114
+ + + E D V +SAL+ G + G+ A + EM +KPD+ +M A
Sbjct: 437 IRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAF- 495
Query: 115 QLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKR----DL 170
K G+ KL KEM +
Sbjct: 496 -----------------------------------CKKGDAQTGFKLLKEMQSDGHVPSV 520
Query: 171 VSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQS 230
V+Y ++ GL G ++A L ++ML G+VPD++ + +L H + Y Q
Sbjct: 521 VTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEG--HHRHANSSKRYIQ- 577
Query: 231 MKQKYGISPSPDHFACMVDLLSRS 254
K + GI + +V+ L R+
Sbjct: 578 -KPEIGIVADLASYKSIVNELDRA 600
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 131/296 (44%), Gaps = 45/296 (15%)
Query: 5 NVASWNAMLCGFVKDGDLSSARGVFDAMPEK----NVVSFTTMIDGYAKAGDMAAARFLF 60
+V +++A++ K+ + A G+FD M ++ N V FTT+I G+++ G++ + +
Sbjct: 309 DVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESY 368
Query: 61 EQATEK----DVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQL 116
++ K D+V ++ L++G+ +NG A + M + ++PD+ +L+ +
Sbjct: 369 QKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRG 428
Query: 117 GHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSM 176
G +E A + + ++ I+L D V + ++
Sbjct: 429 GDVETALEIRKEMDQNGIEL--------------------------------DRVGFSAL 456
Query: 177 IQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYG 236
+ G+ G DA R ML G+ PD+V +T+++ A G G+ + M Q G
Sbjct: 457 VCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEM-QSDG 515
Query: 237 ISPSPDHFACMVDLLSRSGHLGDAYELMKSMHE----PHAGAWGALLGACKLHGDS 288
PS + +++ L + G + +A L+ +M P + LL H +S
Sbjct: 516 HVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEGHHRHANS 571
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 88/183 (48%), Gaps = 10/183 (5%)
Query: 91 FLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIA--ALLDM 148
++E+ + ++ LM+ + G++ AQ V ++K S+ Q V++ L++
Sbjct: 228 YMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSL---QPTVVSFNTLING 284
Query: 149 NAKCGNMDRALKLFKEMPKR----DLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPD 204
K GN+D +L +M K D+ +Y ++I L + A LF+ M GL+P+
Sbjct: 285 YCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPN 344
Query: 205 EVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELM 264
+V FT ++ S +G +D +Q M K G+ P + +V+ ++G L A ++
Sbjct: 345 DVIFTTLIHGHSRNGEIDLMKESYQKMLSK-GLQPDIVLYNTLVNGFCKNGDLVAARNIV 403
Query: 265 KSM 267
M
Sbjct: 404 DGM 406
>AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10387673-10389100 FORWARD
LENGTH=475
Length = 475
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 120/226 (53%), Gaps = 10/226 (4%)
Query: 82 GQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVD----SYVSKSSIDLQ 137
G +A++V +E+K D L+ L + LE A+ V + VS + +
Sbjct: 98 GNWREAVEVLDYLENKGYAMDLIRLLGLAKLCGKPEALEAARVVHECIIALVSPCDVGAR 157
Query: 138 QDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSML 197
A+++M + C ++D ALK+F+EMP+ + + C M++ +G GE+A+ LF
Sbjct: 158 N-----AIIEMYSGCCSVDDALKVFEEMPEWNSGTLCVMMRCFVNNGYGEEAIDLFTRFK 212
Query: 198 MEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHL 257
EG P+ F + + C+ +G V EG FQ+M ++YGI PS +H+ + +L+ SGHL
Sbjct: 213 EEGNKPNGEIFNQVFSTCTLTGDVKEGSLQFQAMYREYGIVPSMEHYHSVTKMLATSGHL 272
Query: 258 GDAYELMKSM-HEPHAGAWGALLGACKLHGDSDLGEIVANQLFELE 302
+A ++ M EP W L+ ++HGD +LG+ A + +L+
Sbjct: 273 DEALNFVERMPMEPSVDVWETLMNLSRVHGDVELGDRCAELVEKLD 318
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 145/281 (51%), Gaps = 13/281 (4%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMP----EKNVVSFTTMIDGYAKAGDMAAA 56
M +V S+N ++ G++K G A +FD + ++V++ T+IDG ++G++ A
Sbjct: 369 MAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGA 428
Query: 57 RFLFEQATEK----DVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSA 112
+ L E+ T + DV+ ++ L+ G+V+NG + A +V+ EM K +KPD + +
Sbjct: 429 QRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVG 488
Query: 113 TSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRAL----KLFKEMPKR 168
+LG + A + + + + +D K GN+ +A+ K+F+
Sbjct: 489 ELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVP 548
Query: 169 DLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYF 228
D V+Y ++I+G +G + A L++ ML + L P + + +++ + +G +++ + Y
Sbjct: 549 DHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYS 608
Query: 229 QSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHE 269
MK++ G+ P+ ++ + ++G++ +AY + M E
Sbjct: 609 TEMKKR-GVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEE 648
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 83/349 (23%), Positives = 151/349 (43%), Gaps = 18/349 (5%)
Query: 5 NVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQAT 64
+++N +C G + AR + +M +VVS+ T++ GY K G A LF+
Sbjct: 342 TTSTYNIYICALCDFGRIDDARELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLR 401
Query: 65 EKD----VVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLE 120
D +V ++ LI G ++G A ++ EM ++ + PD +L+ + G+L
Sbjct: 402 AGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLS 461
Query: 121 LAQWV-DSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKR-----DLVSYC 174
+A V D + K + A+ ++ + G+ D+A +L +EM DL Y
Sbjct: 462 MATEVYDEMLRKGIKPDGYAYTTRAVGEL--RLGDSDKAFRLHEEMVATDHHAPDLTIYN 519
Query: 175 SMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQK 234
I GL G A+ + GLVPD V +T ++ +G N + M +K
Sbjct: 520 VRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRK 579
Query: 235 YGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHE----PHAGAWGALL-GACKLHGDSD 289
+ PS + ++ +++G L A++ M + P+ ALL G CK +
Sbjct: 580 -RLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDE 638
Query: 290 LGEIVANQLFELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQ 338
+ E P N +Y +L + E+W +V + M ++ ++
Sbjct: 639 AYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIE 687
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/309 (22%), Positives = 131/309 (42%), Gaps = 44/309 (14%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNV----VSFTTMIDGYAKAGDMAAA 56
MP V ++N ML K GDL ++ M +N+ V++ +I+G++K G M A
Sbjct: 235 MP--TVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEA 292
Query: 57 RFLFEQATEKDVV----AWSALISGYVQNGQPNQALKVFLEMESKNVKP----------- 101
R +++ LI GY + G + A V EM + + P
Sbjct: 293 RRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICA 352
Query: 102 --------DEFILVSLMSA-------TSQLGHLELAQWVDSYVSKSSIDLQQDH----VI 142
D L+S M+A T G++++ ++V++ + + H
Sbjct: 353 LCDFGRIDDARELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTY 412
Query: 143 AALLDMNAKCGNMDRALKLFKEMPKR----DLVSYCSMIQGLSIHGCGEDAVRLFNSMLM 198
L+D + GN++ A +L +EM + D+++Y ++++G +G A +++ ML
Sbjct: 413 NTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLR 472
Query: 199 EGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLG 258
+G+ PD A+T G D+ + + M +P + +D L + G+L
Sbjct: 473 KGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLV 532
Query: 259 DAYELMKSM 267
A E + +
Sbjct: 533 KAIEFQRKI 541
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 75/162 (46%), Gaps = 11/162 (6%)
Query: 144 ALLDMNAKCGNMDRALKLFKEMPKRDL----VSYCSMIQGLSIHGCGEDAVRLFNSMLME 199
+LD K G+++R K++ EM +R++ V+Y +I G S +G E+A R M
Sbjct: 243 TMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRS 302
Query: 200 GLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGD 259
G +F ++ GL D+ W M GI P+ + + L G + D
Sbjct: 303 GFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNA-GIYPTTSTYNIYICALCDFGRIDD 361
Query: 260 AYELMKSMHEPHAGAWGALLGACKLHGDSDLGEIV-ANQLFE 300
A EL+ SM P ++ L +HG +G+ V A+ LF+
Sbjct: 362 ARELLSSMAAPDVVSYNTL-----MHGYIKMGKFVEASLLFD 398
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 124/288 (43%), Gaps = 30/288 (10%)
Query: 22 LSSARGVFDAMPEK----NVVSFTTMIDGYAKAGDMAAARFLFEQATEKDV----VAWSA 73
++ A V++ M E V++F TM+D KAGD+ ++ + +++ V ++
Sbjct: 219 MNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNI 278
Query: 74 LISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDS------ 127
LI+G+ +NG+ +A + +M + L+ + G + A V
Sbjct: 279 LINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAG 338
Query: 128 -YVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCG 186
Y + S+ ++ I AL D G +D A +L M D+VSY +++ G G
Sbjct: 339 IYPTTSTYNI----YICALCDF----GRIDDARELLSSMAAPDVVSYNTLMHGYIKMGKF 390
Query: 187 EDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFAC 246
+A LF+ + + P V + ++ SG ++ + M + I P +
Sbjct: 391 VEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQL-IFPDVITYTT 449
Query: 247 MVDLLSRSGHLGDAYELMKSMH----EPHAGAWGAL-LGACKLHGDSD 289
+V ++G+L A E+ M +P A+ +G +L GDSD
Sbjct: 450 LVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRL-GDSD 496
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 139/282 (49%), Gaps = 28/282 (9%)
Query: 5 NVASWNAMLCGFVKDGDLSSARGVFDAMPEK----NVVSFTTMIDGYAKAGDMAAARFLF 60
NV + A++ FVK+G+L AR ++ M + NV ++ ++I+G+ G + A+++F
Sbjct: 253 NVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMF 312
Query: 61 EQATEK----DVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQL 116
+ K DVV ++ LI+G+ ++ + +K+F EM + + D F +L+ Q
Sbjct: 313 DLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQA 372
Query: 117 GHLELAQ-----WVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKR--- 168
G L +AQ VD VS + LLD G +++AL + +++ K
Sbjct: 373 GKLNVAQKVFNRMVDCGVSPDIVTYN------ILLDCLCNNGKIEKALVMVEDLQKSEMD 426
Query: 169 -DLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNY 227
D+++Y +IQGL ++A LF S+ +G+ PD +A+ +++ GL E
Sbjct: 427 VDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKL 486
Query: 228 FQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHE 269
+ MK+ G PS + D R + + EL+K+ HE
Sbjct: 487 CRRMKED-GFMPSER----IYDETLRDHYTSLSAELIKAAHE 523
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 117/242 (48%), Gaps = 14/242 (5%)
Query: 36 NVVSFTTMIDGYAKAGDMAAARFLFEQ----ATEKDVVAWSALISGYVQNGQPNQALKVF 91
++V+ ++++G+ + A L + +VV ++ +I+G +N N AL+VF
Sbjct: 148 SIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVF 207
Query: 92 LEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVI--AALLDMN 149
ME K ++ D +L+S S G A + + K ID +VI AL+D
Sbjct: 208 YCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKID---PNVIFFTALIDTF 264
Query: 150 AKCGNMDRALKLFKEMPKRDLV----SYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDE 205
K GN+ A L+KEM +R +V +Y S+I G IHGC DA +F+ M+ +G PD
Sbjct: 265 VKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDV 324
Query: 206 VAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMK 265
V + ++T S V++G F M + G+ + ++ ++G L A ++
Sbjct: 325 VTYNTLITGFCKSKRVEDGMKLFCEMTYQ-GLVGDAFTYNTLIHGYCQAGKLNVAQKVFN 383
Query: 266 SM 267
M
Sbjct: 384 RM 385
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 151/307 (49%), Gaps = 28/307 (9%)
Query: 5 NVASWNAMLCGFVKDGDLSSARGVFDAMPEK----NVVSFTTMIDGYAKAGDMAAARFLF 60
NV +++A++ FVK+G L A ++D M ++ ++ +++++I+G+ + A+ +F
Sbjct: 324 NVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF 383
Query: 61 EQATEKD----VVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQL 116
E KD VV ++ LI G+ + + + +++F EM + + + +L+ Q
Sbjct: 384 ELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQA 443
Query: 117 GHLELAQWVDSYVSKSSIDLQQDHVI-AALLDMNAKCGNMDRALKLFKEMPKR----DLV 171
G ++AQ + + S + D + + LLD K G +++AL +F+ + K D+
Sbjct: 444 GDCDMAQKI--FKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIY 501
Query: 172 SYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSM 231
+Y MI+G+ G ED LF S+ ++G+ P+ + +T +++ GL +E F+ M
Sbjct: 502 TYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREM 561
Query: 232 KQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHGDSDLG 291
K+ G P+ + ++ R G + EL+K M +C GD+
Sbjct: 562 KED-GTLPNSGTYNTLIRARLRDGDKAASAELIKEMR------------SCGFVGDASTI 608
Query: 292 EIVANQL 298
+V N L
Sbjct: 609 SMVINML 615
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 139/304 (45%), Gaps = 31/304 (10%)
Query: 3 QRNVASWNAMLCGFVKDGDLSSARGVFDAMPEK----NVVSFTTMIDGYAKAGDMAAARF 58
Q N ++N ++ G S A + D M + ++ ++ T+++G K GD+ A
Sbjct: 182 QPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALS 241
Query: 59 LFEQ----ATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATS 114
L ++ E DVV ++ +I N AL +F EM++K ++P+ SL+
Sbjct: 242 LLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLC 301
Query: 115 QLGHLELAQWVDSYVSKSSIDLQQDHV------IAALLDMNAKCGNMDRALKLFKEMPKR 168
G +W D+ S+ D+ + + +AL+D K G + A KL+ EM KR
Sbjct: 302 NYG-----RWSDA--SRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 354
Query: 169 ----DLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEG 224
D+ +Y S+I G +H ++A +F M+ + P+ V + ++ + V+EG
Sbjct: 355 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEG 414
Query: 225 WNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHE----PHAGAWGALL- 279
F+ M Q+ G+ + + ++ L ++G A ++ K M P + LL
Sbjct: 415 MELFREMSQR-GLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLD 473
Query: 280 GACK 283
G CK
Sbjct: 474 GLCK 477
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/339 (24%), Positives = 154/339 (45%), Gaps = 59/339 (17%)
Query: 3 QRNVASWNAMLCGFVKDGDLSSARGVFDAMPEK----NVVSFTTMIDGYAKAGDMA-AAR 57
+ +V + ++ +++ A +F M K NVV++ ++I G + A+R
Sbjct: 252 EADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASR 311
Query: 58 FL---FEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATS 114
L E+ +VV +SALI +V+ G+ +A K++ EM +++ PD F SL++
Sbjct: 312 LLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 371
Query: 115 QLGHLELAQWV-DSYVSKSSIDLQQDHVIA--ALLDMNAKCGNMDRALKLFKEMPKRDL- 170
L+ A+ + + +SK +V+ L+ K ++ ++LF+EM +R L
Sbjct: 372 MHDRLDEAKHMFELMISKDCF----PNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLV 427
Query: 171 ---VSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTA-CSH--------- 217
V+Y ++IQGL G + A ++F M+ +G+ PD + ++I+L C +
Sbjct: 428 GNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVV 487
Query: 218 -------------------------SGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLS 252
+G V++GW+ F S+ K G+ P+ + M+
Sbjct: 488 FEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLK-GVKPNVIIYTTMISGFC 546
Query: 253 RSGHLGDAYELMKSMHE----PHAGAWGALLGACKLHGD 287
R G +A L + M E P++G + L+ A GD
Sbjct: 547 RKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGD 585
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 116/269 (43%), Gaps = 58/269 (21%)
Query: 65 EKDVVAWSALISGY-----------------VQNGQPN------------------QALK 89
E D+V S+L++GY V QPN +A+
Sbjct: 147 EPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVA 206
Query: 90 VFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVI-AALLDM 148
+ M ++ +PD F ++++ + G ++LA + + K I + D VI ++D
Sbjct: 207 LIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKI--EADVVIYTTIIDA 264
Query: 149 NAKCGNMDRALKLFKEMPKR----DLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPD 204
N++ AL LF EM + ++V+Y S+I+ L +G DA RL + M+ + P+
Sbjct: 265 LCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPN 324
Query: 205 EVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFA--------CMVDLLSRSGH 256
V F+ ++ A G + E + M ++ S PD F CM D L + H
Sbjct: 325 VVTFSALIDAFVKEGKLVEAEKLYDEMIKR---SIDPDIFTYSSLINGFCMHDRLDEAKH 381
Query: 257 LGDAYELMKSMH-EPHAGAWGALL-GACK 283
+ +ELM S P+ + L+ G CK
Sbjct: 382 M---FELMISKDCFPNVVTYNTLIKGFCK 407
>AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14510482-14511891 FORWARD
LENGTH=469
Length = 469
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 118/218 (54%), Gaps = 6/218 (2%)
Query: 86 QALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAAL 145
+AL+V +E K D L+ L ++ LE A+ V ++ +D + H +
Sbjct: 95 EALEVIDILEDKGYIVDFPRLLGLAKLCGEVEALEEARVVHDCIT--PLDARSYHTV--- 149
Query: 146 LDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDE 205
++M + C + D AL +F EMPKR+ ++ +MI+ L+ +G GE A+ +F + EG PD+
Sbjct: 150 IEMYSGCRSTDDALNVFNEMPKRNSETWGTMIRCLAKNGEGERAIDMFTRFIEEGNKPDK 209
Query: 206 VAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMK 265
F + AC G ++EG +F+SM + YG+ S + + ++++L+ GHL +A + ++
Sbjct: 210 EIFKAVFFACVSIGDINEGLLHFESMYRDYGMVLSMEDYVNVIEMLAACGHLDEALDFVE 269
Query: 266 SMH-EPHAGAWGALLGACKLHGDSDLGEIVANQLFELE 302
M EP W L+ C + G +LG+ A + +L+
Sbjct: 270 RMTVEPSVEMWETLMNLCWVQGYLELGDRFAELIKKLD 307
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 74/157 (47%), Gaps = 6/157 (3%)
Query: 11 AMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVA 70
A LCG V+ L AR V D + + S+ T+I+ Y+ A +F + +++
Sbjct: 119 AKLCGEVEA--LEEARVVHDCITPLDARSYHTVIEMYSGCRSTDDALNVFNEMPKRNSET 176
Query: 71 WSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLE--LAQWVDSY 128
W +I +NG+ +A+ +F + KPD+ I ++ A +G + L + Y
Sbjct: 177 WGTMIRCLAKNGEGERAIDMFTRFIEEGNKPDKEIFKAVFFACVSIGDINEGLLHFESMY 236
Query: 129 VSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEM 165
+ +D+V +++M A CG++D AL + M
Sbjct: 237 RDYGMVLSMEDYV--NVIEMLAACGHLDEALDFVERM 271
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 141/285 (49%), Gaps = 21/285 (7%)
Query: 11 AMLCGFVKDGDLSSARGVFDAMPEKNV----VSFTTMIDGYAKAGDM-AAARFLFEQATE 65
+LC K L+ A F M + + V +TT+IDG+ K GD+ AA++F +E +
Sbjct: 324 GLLCRICK---LAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSR 380
Query: 66 K---DVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELA 122
DV+ ++A+ISG+ Q G +A K+F EM K ++PD L++ + GH++ A
Sbjct: 381 DITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDA 440
Query: 123 QWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPK----RDLVSYCSMIQ 178
V +++ ++ L+D K G++D A +L EM K ++ +Y S++
Sbjct: 441 FRVHNHMIQAGCS-PNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVN 499
Query: 179 GLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGIS 238
GL G E+AV+L GL D V +T ++ A SG +D+ + M K G+
Sbjct: 500 GLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGK-GLQ 558
Query: 239 PSPDHFACMVDLLSRSGHLGDAYELMKSMH----EPHAGAWGALL 279
P+ F +++ G L D +L+ M P+A + +L+
Sbjct: 559 PTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLV 603
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 141/297 (47%), Gaps = 20/297 (6%)
Query: 5 NVASWNAMLCGFVKDG-DLSSARGVFDAMPEK----NVVSFTTMIDGYAKAGDMAAARFL 59
+V S N L KD ++A VF PE NV S+ +I + G + A L
Sbjct: 209 SVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHL 268
Query: 60 FE----QATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQ 115
+ DV+++S +++GY + G+ ++ K+ M+ K +KP+ +I S++ +
Sbjct: 269 LLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCR 328
Query: 116 LGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDL----V 171
+ L A+ S + + I L V L+D K G++ A K F EM RD+ +
Sbjct: 329 ICKLAEAEEAFSEMIRQGI-LPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVL 387
Query: 172 SYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSM 231
+Y ++I G G +A +LF+ M +GL PD V FT ++ +G + + + M
Sbjct: 388 TYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHM 447
Query: 232 KQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMH----EPHAGAWGALL-GACK 283
Q G SP+ + ++D L + G L A EL+ M +P+ + +++ G CK
Sbjct: 448 IQA-GCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCK 503
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 137/278 (49%), Gaps = 20/278 (7%)
Query: 5 NVASWNAMLCGFVKDGDLSSARGVFDAM----PEKNVVSFTTMIDGYAKAGDMAAA---- 56
+V ++ A++ GF + GD+ A +F M E + V+FT +I+GY KAG M A
Sbjct: 385 DVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVH 444
Query: 57 RFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQL 116
+ + +VV ++ LI G + G + A ++ EM ++P+ F S+++ +
Sbjct: 445 NHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKS 504
Query: 117 GHLELA-QWVDSYVSKSSIDLQQDHVI-AALLDMNAKCGNMDRALKLFKEMPKRDL---- 170
G++E A + V + + L D V L+D K G MD+A ++ KEM + L
Sbjct: 505 GNIEEAVKLVGEF---EAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTI 561
Query: 171 VSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAF-TIILTACSHSGLVDEGWNYFQ 229
V++ ++ G +HG ED +L N ML +G+ P+ F +++ C + L ++
Sbjct: 562 VTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNL-KAATAIYK 620
Query: 230 SMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSM 267
M + G+ P + +V ++ ++ +A+ L + M
Sbjct: 621 DMCSR-GVGPDGKTYENLVKGHCKARNMKEAWFLFQEM 657
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 141/285 (49%), Gaps = 21/285 (7%)
Query: 11 AMLCGFVKDGDLSSARGVFDAMPEKNV----VSFTTMIDGYAKAGDM-AAARFLFEQATE 65
+LC K L+ A F M + + V +TT+IDG+ K GD+ AA++F +E +
Sbjct: 324 GLLCRICK---LAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSR 380
Query: 66 K---DVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELA 122
DV+ ++A+ISG+ Q G +A K+F EM K ++PD L++ + GH++ A
Sbjct: 381 DITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDA 440
Query: 123 QWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPK----RDLVSYCSMIQ 178
V +++ ++ L+D K G++D A +L EM K ++ +Y S++
Sbjct: 441 FRVHNHMIQAGCS-PNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVN 499
Query: 179 GLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGIS 238
GL G E+AV+L GL D V +T ++ A SG +D+ + M K G+
Sbjct: 500 GLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGK-GLQ 558
Query: 239 PSPDHFACMVDLLSRSGHLGDAYELMKSMH----EPHAGAWGALL 279
P+ F +++ G L D +L+ M P+A + +L+
Sbjct: 559 PTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLV 603
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 141/297 (47%), Gaps = 20/297 (6%)
Query: 5 NVASWNAMLCGFVKDG-DLSSARGVFDAMPEK----NVVSFTTMIDGYAKAGDMAAARFL 59
+V S N L KD ++A VF PE NV S+ +I + G + A L
Sbjct: 209 SVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHL 268
Query: 60 FE----QATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQ 115
+ DV+++S +++GY + G+ ++ K+ M+ K +KP+ +I S++ +
Sbjct: 269 LLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCR 328
Query: 116 LGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDL----V 171
+ L A+ S + + I L V L+D K G++ A K F EM RD+ +
Sbjct: 329 ICKLAEAEEAFSEMIRQGI-LPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVL 387
Query: 172 SYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSM 231
+Y ++I G G +A +LF+ M +GL PD V FT ++ +G + + + M
Sbjct: 388 TYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHM 447
Query: 232 KQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMH----EPHAGAWGALL-GACK 283
Q G SP+ + ++D L + G L A EL+ M +P+ + +++ G CK
Sbjct: 448 IQA-GCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCK 503
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 137/278 (49%), Gaps = 20/278 (7%)
Query: 5 NVASWNAMLCGFVKDGDLSSARGVFDAM----PEKNVVSFTTMIDGYAKAGDMAAA---- 56
+V ++ A++ GF + GD+ A +F M E + V+FT +I+GY KAG M A
Sbjct: 385 DVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVH 444
Query: 57 RFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQL 116
+ + +VV ++ LI G + G + A ++ EM ++P+ F S+++ +
Sbjct: 445 NHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKS 504
Query: 117 GHLELA-QWVDSYVSKSSIDLQQDHVI-AALLDMNAKCGNMDRALKLFKEMPKRDL---- 170
G++E A + V + + L D V L+D K G MD+A ++ KEM + L
Sbjct: 505 GNIEEAVKLVGEF---EAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTI 561
Query: 171 VSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAF-TIILTACSHSGLVDEGWNYFQ 229
V++ ++ G +HG ED +L N ML +G+ P+ F +++ C + L ++
Sbjct: 562 VTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNL-KAATAIYK 620
Query: 230 SMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSM 267
M + G+ P + +V ++ ++ +A+ L + M
Sbjct: 621 DMCSR-GVGPDGKTYENLVKGHCKARNMKEAWFLFQEM 657
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 137/282 (48%), Gaps = 26/282 (9%)
Query: 5 NVASWNAMLCGFVKDGDLSSARGVFDAMPEK----NVVSFTTMIDGYAKAGDMAAARFLF 60
+V ++N+++ G+ K+G + A V M K NV S+T ++DG+ K G + A +
Sbjct: 388 DVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVL 447
Query: 61 EQAT----EKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQL 116
+ + + + V ++ LIS + + + +A+++F EM K KPD + SL+S ++
Sbjct: 448 NEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEV 507
Query: 117 GHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNA------KCGNMDRALKLFKEM----P 166
++ A W+ D+ + V+A + N + G + A KL EM
Sbjct: 508 DEIKHALWLLR-------DMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGS 560
Query: 167 KRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWN 226
D ++Y S+I+GL G + A LF ML +G P ++ I++ SG+V+E
Sbjct: 561 PLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVE 620
Query: 227 YFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMH 268
+ + M + G +P F +++ L R+G + D + + +
Sbjct: 621 FQKEMVLR-GSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQ 661
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 109/231 (47%), Gaps = 17/231 (7%)
Query: 5 NVASWNAMLCGFVKDGDLSSARGVFDAMPEK----NVVSFTTMIDGYAKAGDMAAARFLF 60
N +N ++ F K+ + A +F MP K +V +F ++I G + ++ A +L
Sbjct: 458 NTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLL 517
Query: 61 EQATEKDVVA----WSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQL 116
+ VVA ++ LI+ +++ G+ +A K+ EM + DE SL+ +
Sbjct: 518 RDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRA 577
Query: 117 GHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKC--GNMDRALKLFKEMPKR----DL 170
G ++ A+ S K D I+ + +N C G ++ A++ KEM R D+
Sbjct: 578 GEVDKAR---SLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDI 634
Query: 171 VSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLV 221
V++ S+I GL G ED + +F + EG+ PD V F +++ G V
Sbjct: 635 VTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFV 685
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 127/303 (41%), Gaps = 22/303 (7%)
Query: 8 SWNAMLCGFVKDGDLSSARGVFDAMPEKNV----VSFTTMIDGYAKAGDMAAARFLFEQA 63
S+N +L V A VF M + + +F ++ + ++ +A L
Sbjct: 184 SYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDM 243
Query: 64 TEK----DVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHL 119
T+ + V + LI + + N+AL++ EM PD ++ + +
Sbjct: 244 TKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRI 303
Query: 120 -ELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKC--GNMDRALKLFKEMPKRDLVSYCSM 176
E A+ V+ + + D + L MN C G +D A LF +PK ++V + ++
Sbjct: 304 NEAAKMVNRMLIRG---FAPDDITYGYL-MNGLCKIGRVDAAKDLFYRIPKPEIVIFNTL 359
Query: 177 IQGLSIHGCGEDAVRLFNSMLME-GLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKY 235
I G HG +DA + + M+ G+VPD + ++ GLV M+ K
Sbjct: 360 IHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNK- 418
Query: 236 GISPSPDHFACMVDLLSRSGHLGDAYELMKSMH----EPHAGAWGALLGA-CKLHGDSDL 290
G P+ + +VD + G + +AY ++ M +P+ + L+ A CK H +
Sbjct: 419 GCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEA 478
Query: 291 GEI 293
EI
Sbjct: 479 VEI 481
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 136/306 (44%), Gaps = 42/306 (13%)
Query: 5 NVASWNAMLCGFVKDGDLSSARGVFDAMPEKNV----VSFTTMIDGYAKAGDM-AAARFL 59
NV ++ A++ GF K G++ A ++ M E V + +TT+IDG+ + GD A +FL
Sbjct: 232 NVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFL 291
Query: 60 ---FEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQL 116
Q D+ A+ +ISG NG+ +A ++ +ME ++ PD I ++M+A +
Sbjct: 292 AKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKS 351
Query: 117 GHLE--------------------LAQWVDSYVSKSS---------IDLQQDHVIAALLD 147
G ++ L+ +D I+ D + L+D
Sbjct: 352 GRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDVMYTVLID 411
Query: 148 MNAKCGNMDRALKLFKEMPKRDLVS----YCSMIQGLSIHGCGEDAVRLFNSMLMEGLVP 203
K G+ +LF ++ + LV Y S I GL G DA +L M+ EGL+
Sbjct: 412 ALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLL 471
Query: 204 DEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYEL 263
D +A+T ++ + GL+ E F M GISP F ++ + G++ A +L
Sbjct: 472 DLLAYTTLIYGLASKGLMVEARQVFDEMLNS-GISPDSAVFDLLIRAYEKEGNMAAASDL 530
Query: 264 MKSMHE 269
+ M
Sbjct: 531 LLDMQR 536
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 122/268 (45%), Gaps = 49/268 (18%)
Query: 5 NVASWNAMLCGFVKDGDLSSARGVFDAMPEK----NVVSFTTMIDGYAKAGDMAAARFLF 60
NV +++ + F K G+L A F +M NVV+FT +IDGY KAGD+ A L+
Sbjct: 162 NVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLY 221
Query: 61 EQATEK----DVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQL 116
++ +VV ++ALI G+ + G+ +A +++ M V+P+ + ++
Sbjct: 222 KEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTI------- 274
Query: 117 GHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKR----DLVS 172
+D + + G+ D A+K +M + D+ +
Sbjct: 275 --------IDGFFQR---------------------GDSDNAMKFLAKMLNQGMRLDITA 305
Query: 173 YCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMK 232
Y +I GL +G ++A + M LVPD V FT ++ A SG + N + +
Sbjct: 306 YGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLI 365
Query: 233 QKYGISPSPDHFACMVDLLSRSGHLGDA 260
++ G P + M+D ++++G L +A
Sbjct: 366 ER-GFEPDVVALSTMIDGIAKNGQLHEA 392
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 81/350 (23%), Positives = 162/350 (46%), Gaps = 28/350 (8%)
Query: 5 NVASWNAMLCGFVKDGDLSSARGVFDAMP-------EKNVVSFTTMIDGYAKAGDMAAAR 57
+V S+N+++ G ++GD+ SA V +++ + ++VSF ++ +G++K M
Sbjct: 90 DVISYNSLIDGHCRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKM-KMLDEV 148
Query: 58 FLFE----QATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSAT 113
F++ + +VV +S I + ++G+ ALK F M+ + P+ L+
Sbjct: 149 FVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGY 208
Query: 114 SQLGHLELAQWVDSYVSKSSIDLQQDHVI-AALLDMNAKCGNMDRALKLFKEMPKRDL-- 170
+ G LE+A V Y + + + V AL+D K G M RA +++ M + +
Sbjct: 209 CKAGDLEVA--VSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEP 266
Query: 171 --VSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYF 228
+ Y ++I G G ++A++ ML +G+ D A+ +I++ +G + E
Sbjct: 267 NSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIV 326
Query: 229 QSMKQKYGISPSPDHFACMVDLLSRSGHLGDA----YELMKSMHEPHAGAWGALLGACKL 284
+ M +K + P F M++ +SG + A ++L++ EP A ++
Sbjct: 327 EDM-EKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAK 385
Query: 285 HGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRE 334
+G L E + F +E N Y +L + +I+V + S++ E
Sbjct: 386 NG--QLHEAIV--YFCIEKANDVMYTVLIDALCKEGDFIEVERLFSKISE 431
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 143/290 (49%), Gaps = 18/290 (6%)
Query: 5 NVASWNAMLCGFVKDGDLSSARGVFDAMPEK----NVVSFTTMIDGYAKAGDMAAARFLF 60
NV ++N+++ G+ GD+ V M E+ NVV++T++I GY K G M A +F
Sbjct: 260 NVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVF 319
Query: 61 EQATEKDVVA----WSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQL 116
E EK +VA + L+ GY + GQ A++V M V+ + I SL++ +
Sbjct: 320 ELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKS 379
Query: 117 GHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLV----S 172
G L A+ + S ++ S+ H L+D + G +D ALKL +M ++++V +
Sbjct: 380 GQLVEAEQIFSRMNDWSLK-PDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMT 438
Query: 173 YCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMK 232
Y +++G S G D + L+ ML G+ DE++ + +L A G +E ++++
Sbjct: 439 YNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVL 498
Query: 233 QKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMH----EPHAGAWGAL 278
+ G+ M+ L + + +A E++ +++ +P + AL
Sbjct: 499 AR-GLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQAL 547
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/309 (22%), Positives = 145/309 (46%), Gaps = 21/309 (6%)
Query: 4 RNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVS----FTTMIDGYAKAGDMA-AARF 58
RNV ++ +++ G+ K G + A VF+ + EK +V+ + ++DGY + G + A R
Sbjct: 294 RNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRV 353
Query: 59 ---LFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQ 115
+ E + ++LI+GY ++GQ +A ++F M ++KPD +L+ +
Sbjct: 354 HDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCR 413
Query: 116 LGHLELA-QWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKR----DL 170
G+++ A + D K + + I LL ++ G L L+K M KR D
Sbjct: 414 AGYVDEALKLCDQMCQKEVVPTVMTYNI--LLKGYSRIGAFHDVLSLWKMMLKRGVNADE 471
Query: 171 VSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQS 230
+S ++++ L G +A++L+ ++L GL+ D + ++++ V+E +
Sbjct: 472 ISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDN 531
Query: 231 MKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHE----PHAGAWGALL-GACKLH 285
+ + P+ + + + G+L +A+ + + M P + L+ GA K
Sbjct: 532 V-NIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYR 590
Query: 286 GDSDLGEIV 294
+ + ++V
Sbjct: 591 HLNKVADLV 599
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 149/325 (45%), Gaps = 31/325 (9%)
Query: 34 EKNVVSFTTMIDGYAKAGDMAAA----RFLFEQATEKDVVAWSALISGYVQNGQPNQALK 89
E NVV++ ++I+GYA GD+ R + E+ ++VV +++LI GY + G +A
Sbjct: 258 ELNVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEH 317
Query: 90 VFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWV-DSYVSKSSIDLQQDHVIA-ALLD 147
VF ++ K + D+ + LM + G + A V D+ + I ++ + I +L++
Sbjct: 318 VFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMI---EIGVRTNTTICNSLIN 374
Query: 148 MNAKCGNMDRALKLFKEMP----KRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVP 203
K G + A ++F M K D +Y +++ G G ++A++L + M + +VP
Sbjct: 375 GYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVP 434
Query: 204 DEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYEL 263
+ + I+L S G + + ++ M ++ G+ + D +C LL LGD E
Sbjct: 435 TVMTYNILLKGYSRIGAFHDVLSLWKMMLKR-GV--NADEISCST-LLEALFKLGDFNEA 490
Query: 264 MKSMHEPHAGAWGALL----------GACKLHGDSDLGEIVAN-QLFELEPQNAANYILL 312
MK + A G L G CK+ ++ EI+ N +F +P Y L
Sbjct: 491 MKLWE--NVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPA-VQTYQAL 547
Query: 313 SNIYAAAERWIDVSLVRSRMRERSV 337
S+ Y + V+ M + +
Sbjct: 548 SHGYYKVGNLKEAFAVKEYMERKGI 572
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 82/339 (24%), Positives = 141/339 (41%), Gaps = 65/339 (19%)
Query: 6 VASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVS----FTTMIDGYAKAGDM-AAARFLF 60
V ++ A+ G+ K G+L A V + M K + + T+I G K + A +
Sbjct: 541 VQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVI 600
Query: 61 E---QATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNV------------------ 99
E + V + ALI+G+ G ++A EM K +
Sbjct: 601 ELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLD 660
Query: 100 KPDEFILV---------------SL-----MSATSQLGHLELAQWVDSYVSKSSI---DL 136
K DE L+ SL SAT+ L ++A+ V++ K + ++
Sbjct: 661 KIDEACLLLQKIVDFDLLLPGYQSLKEFLEASATTCLKTQKIAESVENSTPKKLLVPNNI 720
Query: 137 QQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLV-----SYCSMIQGLSIHGCGEDAVR 191
+ IA L K G ++ A KLF ++ D +Y +I G +I G A
Sbjct: 721 VYNVAIAGL----CKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFT 776
Query: 192 LFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLL 251
L + M ++G++P+ V + ++ G VD + QK GI+P+ + ++D L
Sbjct: 777 LRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQK-GITPNAITYNTLIDGL 835
Query: 252 SRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHGDSDL 290
+SG++ +A L + M E G + G+ K GD D+
Sbjct: 836 VKSGNVAEAMRLKEKMIEK-----GLVRGSDK-QGDVDI 868
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 150/310 (48%), Gaps = 20/310 (6%)
Query: 5 NVASWNAMLCGFVKDGDLSSARGVF------DAMPEKNVVSFTTMIDGYAKAGDMAAARF 58
N+ +++AM+ G+ K G++ A G++ + +P NVV F T++DG+ KA ++ AR
Sbjct: 268 NLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLP--NVVVFGTLVDGFCKARELVTARS 325
Query: 59 LFEQ----ATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATS 114
LF + ++ ++ LI G+ ++G +A+ + EMES N+ PD F L++
Sbjct: 326 LFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLC 385
Query: 115 QLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMP----KRDL 170
+ A + + I +L+ K NM++AL L EM + ++
Sbjct: 386 IEDQVAEANRLFQKMKNERI-FPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNI 444
Query: 171 VSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQS 230
+++ ++I G + A+ L+ M ++G+VPD V +T ++ A + E +
Sbjct: 445 ITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSD 504
Query: 231 MKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHGDSDL 290
M + GI P+ FAC+VD + G L A + + ++ + W + C + G
Sbjct: 505 MLEA-GIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRS-CWNHVGFTCLIEGLCQN 562
Query: 291 GEIV-ANQLF 299
G I+ A++ F
Sbjct: 563 GYILRASRFF 572
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 105/211 (49%), Gaps = 15/211 (7%)
Query: 7 ASWNAMLCGFVKDGDLSSARGVFDAMP----EKNVVSFTTMIDGYAKAGDMAAARFLFEQ 62
A++N+++ G+ K+ ++ A + M E N+++F+T+IDGY D+ AA L+ +
Sbjct: 410 ATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFE 469
Query: 63 ATEK----DVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGH 118
T K DVV ++ALI + + +AL+++ +M + P++ L+ + G
Sbjct: 470 MTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGR 529
Query: 119 LELAQWVDSYVSKSSIDLQQDHV-IAALLDMNAKCGNMDRALKLFKEMP----KRDLVSY 173
L +A +D Y + +HV L++ + G + RA + F +M D+ SY
Sbjct: 530 LSVA--IDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSY 587
Query: 174 CSMIQGLSIHGCGEDAVRLFNSMLMEGLVPD 204
SM++G D + L M+ G++P+
Sbjct: 588 VSMLKGHLQEKRITDTMMLQCDMIKTGILPN 618
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 142/305 (46%), Gaps = 23/305 (7%)
Query: 5 NVASWNAMLCGFVKDGDLSSARGVFDAM----PEKNVVSFTTMIDGYAKAGDMAAARFLF 60
N+ + N +L F + LS A M E ++V+F ++++G+ + + A ++F
Sbjct: 115 NLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMF 174
Query: 61 EQAT----EKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQL 116
+Q + +VV ++ +I G ++ Q + AL + ME + PD SL+S
Sbjct: 175 DQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSS 234
Query: 117 GHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKR----DLVS 172
G A + S ++K I AL+D K G + A + ++EM +R D+V+
Sbjct: 235 GRWSDATRMVSCMTKREI-YPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVT 293
Query: 173 YCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMK 232
Y +I GL ++ ++A +F M+ +G PD V ++I++ S V+ G F M
Sbjct: 294 YSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMS 353
Query: 233 QKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSM----HEPHAGAWGALLGACKLHGDS 288
Q+ G+ + + ++ R+G L A E+ + M P+ + L LHG
Sbjct: 354 QR-GVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVL-----LHGLC 407
Query: 289 DLGEI 293
D G+I
Sbjct: 408 DNGKI 412
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 122/250 (48%), Gaps = 18/250 (7%)
Query: 5 NVASWNAMLCGFVKDGDLSSARGVFDAMPEK----NVVSFTTMIDGYAKAGDMAAAR--- 57
+V ++NA++ VK+G +S A ++ M + ++V+++ +I G + A
Sbjct: 255 DVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMF 314
Query: 58 -FLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQL 116
F+ + DVV +S LI+GY ++ + +K+F EM + V + L+ +
Sbjct: 315 GFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRA 374
Query: 117 GHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKC--GNMDRALKLFKEMPKR----DL 170
G L +A+ + + + ++I + ++ C G +++AL + +M K D+
Sbjct: 375 GKLNVAEEIFRRMVFCGV---HPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADI 431
Query: 171 VSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQS 230
V+Y +I+G+ G DA ++ S+ +GL+PD +T ++ GL E F+
Sbjct: 432 VTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRK 491
Query: 231 MKQKYGISPS 240
MK+ GI P+
Sbjct: 492 MKED-GILPN 500
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 142/309 (45%), Gaps = 31/309 (10%)
Query: 5 NVASWNAMLCGFVKDGDLSSARGVFDAMPEKNV----VSFTTMIDGYAKAGDMAAARFLF 60
+V ++N ++ G S A + M EKN+ V F +ID + K G + A L+
Sbjct: 284 DVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLY 343
Query: 61 EQATEK-----DVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQ 115
++ + DVVA++ LI G+ + + + ++VF EM + + + +L+ Q
Sbjct: 344 DEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQ 403
Query: 116 LGHLELAQWVDSYVSKSSI--DLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRD---- 169
+ AQ V + + D+ ++ LLD GN++ AL +F+ M KRD
Sbjct: 404 ARDCDNAQMVFKQMVSDGVHPDIMTYNI---LLDGLCNNGNVETALVVFEYMQKRDMKLD 460
Query: 170 LVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQ 229
+V+Y +MI+ L G ED LF S+ ++G+ P+ V +T +++ GL +E F
Sbjct: 461 IVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFV 520
Query: 230 SMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHGDSD 289
MK+ G P+ + ++ R G + EL+K M +C GD+
Sbjct: 521 EMKED-GPLPNSGTYNTLIRARLRDGDEAASAELIKEMR------------SCGFAGDAS 567
Query: 290 LGEIVANQL 298
+V N L
Sbjct: 568 TFGLVTNML 576
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 137/319 (42%), Gaps = 62/319 (19%)
Query: 5 NVASWNAMLCGFVKDGDLSSARGVFDAMPE----KNVVSFTTMIDGYAKAGDMAAARFLF 60
++ + N++L GF +S A + D M E + V+FTT++ G + + A L
Sbjct: 144 SIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALV 203
Query: 61 EQATEK----DVVAWSALISGYVQNGQPNQALKV-------------------------- 90
E+ K D+V + A+I+G + G+P+ AL +
Sbjct: 204 ERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKY 263
Query: 91 ---------FLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHV 141
F +ME+K +KPD F L+S G +W D+ S+ D+ + ++
Sbjct: 264 KHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYG-----RWSDA--SRLLSDMLEKNI 316
Query: 142 ------IAALLDMNAKCGNMDRALKLFKEMPKR-----DLVSYCSMIQGLSIHGCGEDAV 190
AL+D K G + A KL+ EM K D+V+Y ++I+G + E+ +
Sbjct: 317 NPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGM 376
Query: 191 RLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDL 250
+F M GLV + V +T ++ + D F+ M G+ P + ++D
Sbjct: 377 EVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSD-GVHPDIMTYNILLDG 435
Query: 251 LSRSGHLGDAYELMKSMHE 269
L +G++ A + + M +
Sbjct: 436 LCNNGNVETALVVFEYMQK 454
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 133/263 (50%), Gaps = 15/263 (5%)
Query: 5 NVASWNAMLCGFVKDGDLSSARGVFDAMPEKN----VVSFTTMIDGYAKAGDMAAARFLF 60
++ + ++ G K GDL A F + E N VV++T ++DG KAGD+++A F+
Sbjct: 328 DLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFII 387
Query: 61 EQATEK----DVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQL 116
Q EK +VV +S++I+GYV+ G +A+ + +ME +NV P+ F +++ +
Sbjct: 388 TQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKA 447
Query: 117 GHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKR----DLVS 172
G E+A + + ++ + ++++ AL++ + G + L K+M + D ++
Sbjct: 448 GKEEMAIELSKEMRLIGVE-ENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQIN 506
Query: 173 YCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMK 232
Y S+I G E A+ M G+ D V++ ++++ G V W Y + M+
Sbjct: 507 YTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKVGADWAY-KGMR 565
Query: 233 QKYGISPSPDHFACMVDLLSRSG 255
+K GI P F M++ + G
Sbjct: 566 EK-GIEPDIATFNIMMNSQRKQG 587
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 68/320 (21%), Positives = 139/320 (43%), Gaps = 20/320 (6%)
Query: 5 NVASWNAMLCGFVKDGDLSSARGVFDAMPEKNV----VSFTTMIDGYAKAGDMAAARFLF 60
+ ++N ++ G + G A M + + VS+ T+IDG+ K G+ A+ L
Sbjct: 160 DTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALV 219
Query: 61 EQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLE 120
++ +E +++ + L+S Y +A + +M PD S+++ + G +
Sbjct: 220 DEISELNLITHTILLSSYYNLHAIEEAYR---DMVMSGFDPDVVTFSSIINRLCKGGKVL 276
Query: 121 LAQWVDSYVSKSSIDLQQDHVI-AALLDMNAKCGNMDRALKLFKEMPKR----DLVSYCS 175
+ + + S+ +HV L+D K AL L+ +M R DLV Y
Sbjct: 277 EGGLLLREMEEMSV--YPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTV 334
Query: 176 MIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKY 235
++ GL G +A + F +L + VP+ V +T ++ +G + M +K
Sbjct: 335 LMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEK- 393
Query: 236 GISPSPDHFACMVDLLSRSGHLGDAYELMKSMHE----PHAGAWGALLGACKLHGDSDLG 291
+ P+ ++ M++ + G L +A L++ M + P+ +G ++ G ++
Sbjct: 394 SVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMA 453
Query: 292 EIVANQLFELEPQNAANYIL 311
++ ++ L NYIL
Sbjct: 454 IELSKEM-RLIGVEENNYIL 472
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 85/190 (44%), Gaps = 25/190 (13%)
Query: 9 WNAMLCGFVKDGDLSSARGVFDAMPEK----NVVSFTTMIDGYAKAGDMAAA----RFLF 60
+N ++ K G A V M + + V+F +++ GY + A +
Sbjct: 681 YNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMM 740
Query: 61 EQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLE 120
E +V ++ +I G G + K EM+S+ ++PD+F +L+S +++G+++
Sbjct: 741 EAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMK 800
Query: 121 LAQWV------DSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKR----DL 170
+ + D V K+S L+ A G M +A +L KEM KR +
Sbjct: 801 GSMTIYCEMIADGLVPKTS-------TYNVLISEFANVGKMLQARELLKEMGKRGVSPNT 853
Query: 171 VSYCSMIQGL 180
+YC+MI GL
Sbjct: 854 STYCTMISGL 863
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 147/306 (48%), Gaps = 26/306 (8%)
Query: 5 NVASWNAMLCGFVKDGDLSSARGVFDAMPEK----NVVSFTTMIDGYAKAGDMAAARFLF 60
NV +++A++ FVK+G L A ++D M ++ ++ +++++I+G+ + A+ +F
Sbjct: 325 NVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF 384
Query: 61 EQATEKD----VVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQL 116
E KD VV ++ LI G+ + + ++ +++F EM + + + +L+ Q
Sbjct: 385 ELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQA 444
Query: 117 GHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKR----DLVS 172
+ AQ V + + L + LLD G ++ AL +F+ + + D+ +
Sbjct: 445 RECDNAQIVFKQMVSDGV-LPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYT 503
Query: 173 YCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMK 232
Y MI+G+ G ED LF S+ ++G+ P+ V +T +++ GL +E F+ MK
Sbjct: 504 YNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMK 563
Query: 233 QKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHGDSDLGE 292
++ G P + ++ R G + EL++ M +C+ GD+
Sbjct: 564 EE-GPLPDSGTYNTLIRAHLRDGDKAASAELIREMR------------SCRFVGDASTIG 610
Query: 293 IVANQL 298
+V N L
Sbjct: 611 LVTNML 616
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 117/250 (46%), Gaps = 25/250 (10%)
Query: 3 QRNVASWNAMLCGFVKDGDLSSARGVFDAMPEK----NVVSFTTMIDGYAKAGDMAAARF 58
Q + ++N ++ G + S A + D M K ++V++ +++G K GD+ A
Sbjct: 183 QPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALS 242
Query: 59 LFEQ----ATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATS 114
L ++ E VV ++ +I N AL +F EM++K ++P+ SL+
Sbjct: 243 LLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLC 302
Query: 115 QLGHLELAQWVDSYVSKSSIDLQQDHV------IAALLDMNAKCGNMDRALKLFKEMPKR 168
G +W D+ S+ D+ + + +AL+D K G + A KL+ EM KR
Sbjct: 303 NYG-----RWSDA--SRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 355
Query: 169 ----DLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEG 224
D+ +Y S+I G +H ++A +F M+ + P+ V + ++ + VDEG
Sbjct: 356 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEG 415
Query: 225 WNYFQSMKQK 234
F+ M Q+
Sbjct: 416 MELFREMSQR 425
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 148/298 (49%), Gaps = 25/298 (8%)
Query: 6 VASWNAMLCGFVKDGDLSSARGVFDAMPEK----NVVSFTTMIDGYAKAGDMA-AARFL- 59
V +N ++ +++ A +F M K NVV++ ++I G + A+R L
Sbjct: 256 VVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLS 315
Query: 60 --FEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLG 117
E+ +VV +SALI +V+ G+ +A K++ EM +++ PD F SL++
Sbjct: 316 DMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD 375
Query: 118 HLELAQWV-DSYVSKSSIDLQQDHVIA--ALLDMNAKCGNMDRALKLFKEMPKRDL---- 170
L+ A+ + + +SK +V+ L+ K +D ++LF+EM +R L
Sbjct: 376 RLDEAKHMFELMISKDCF----PNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNT 431
Query: 171 VSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQS 230
V+Y ++I G ++A +F M+ +G++PD + ++I+L ++G V+ F+
Sbjct: 432 VTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEY 491
Query: 231 MKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMH----EPHAGAWGALL-GACK 283
+ Q+ + P + M++ + ++G + D ++L S+ +P+ + ++ G C+
Sbjct: 492 L-QRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCR 548
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/281 (22%), Positives = 126/281 (44%), Gaps = 24/281 (8%)
Query: 36 NVVSFTTMIDGYAKAGDMAAARFLFEQ----ATEKDVVAWSALISGYVQNGQPNQALKVF 91
N+ +++ +I+ + + ++ A + + E D+V ++L++G+ + + A+ +
Sbjct: 115 NLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLV 174
Query: 92 LEMESKNVKPDEFILVSLMSATSQLGHL-ELAQWVDSYVSKSSIDLQQDHVIAALLDMNA 150
+M +PD F +L+ + E VD V K Q D V ++ +N
Sbjct: 175 GQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGC---QPDLVTYGIV-VNG 230
Query: 151 KC--GNMDRALKLFKEMPKRDL----VSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPD 204
C G++D AL L K+M + + V Y ++I L + DA+ LF M +G+ P+
Sbjct: 231 LCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPN 290
Query: 205 EVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAY--- 261
V + ++ + G + M ++ I+P+ F+ ++D + G L +A
Sbjct: 291 VVTYNSLIRCLCNYGRWSDASRLLSDMIER-KINPNVVTFSALIDAFVKEGKLVEAEKLY 349
Query: 262 -ELMKSMHEPHAGAWGALLGACKLHGDSDLGEIVANQLFEL 301
E++K +P + +L+ +H D A +FEL
Sbjct: 350 DEMIKRSIDPDIFTYSSLINGFCMHDRLD----EAKHMFEL 386
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/327 (19%), Positives = 128/327 (39%), Gaps = 48/327 (14%)
Query: 20 GDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQ----ATEKDVVAWSALI 75
GD+ +R P ++V F+ ++ AK L EQ ++ +S LI
Sbjct: 70 GDMVKSR------PFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILI 123
Query: 76 SGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSID 135
+ + + Q + AL V +M +PD L SL++ + VS
Sbjct: 124 NCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCH------GNRISDAVS----- 172
Query: 136 LQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNS 195
++ +++M + D ++ ++I GL H +AV L +
Sbjct: 173 -----LVGQMVEMGYQ----------------PDSFTFNTLIHGLFRHNRASEAVALVDR 211
Query: 196 MLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSG 255
M+++G PD V + I++ G +D + + M+Q I P + ++D L
Sbjct: 212 MVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQG-KIEPGVVIYNTIIDALCNYK 270
Query: 256 HLGDAYELMKSMH----EPHAGAWGALLGACKLHGD-SDLGEIVANQLFELEPQNAANYI 310
++ DA L M P+ + +L+ +G SD ++++ + N +
Sbjct: 271 NVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFS 330
Query: 311 LLSNIYAAAERWIDVSLVRSRMRERSV 337
L + + + ++ + M +RS+
Sbjct: 331 ALIDAFVKEGKLVEAEKLYDEMIKRSI 357
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 127/243 (52%), Gaps = 17/243 (6%)
Query: 5 NVASWNAMLCGFVKDGDLSSARGVFDAMPE----KNVVSFTTMIDGYAKAGDMAAARFLF 60
NV ++ A++ FVK G L A+ +++ M + +V ++ ++I+G G + AR +F
Sbjct: 257 NVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMF 316
Query: 61 ----EQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQL 116
+ V ++ LI G+ ++ + +K+F EM K V + L+ +
Sbjct: 317 YLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLV 376
Query: 117 GHLELAQWVDSYVS--KSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRD----L 170
G ++AQ V + +S ++ D++ +V LLD G +++AL +F+ M KR+ +
Sbjct: 377 GRPDVAQEVFNQMSSRRAPPDIRTYNV---LLDGLCCNGKVEKALMIFEYMRKREMDINI 433
Query: 171 VSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQS 230
V+Y +IQG+ G EDA LF S+ +G+ P+ + +T +++ GL+ E + F+
Sbjct: 434 VTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKK 493
Query: 231 MKQ 233
MK+
Sbjct: 494 MKE 496
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 119/248 (47%), Gaps = 13/248 (5%)
Query: 34 EKNVVSFTTMIDGYAKAGDMAAARFLFEQ----ATEKDVVAWSALISGYVQNGQPNQALK 89
E ++V+FT++++GY + A LF+Q + +VV ++ LI +N N A++
Sbjct: 150 EPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVE 209
Query: 90 VFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMN 149
+F +M + +P+ +L++ ++G A W+ + K I+ AL+D
Sbjct: 210 LFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIE-PNVITFTALIDAF 268
Query: 150 AKCGNMDRALKLFKEMPKR----DLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDE 205
K G + A +L+ M + D+ +Y S+I GL ++G ++A ++F M G P+E
Sbjct: 269 VKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNE 328
Query: 206 VAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVD---LLSRSGHLGDAYE 262
V +T ++ S V++G F M QK G+ + + ++ L+ R + +
Sbjct: 329 VIYTTLIHGFCKSKRVEDGMKIFYEMSQK-GVVANTITYTVLIQGYCLVGRPDVAQEVFN 387
Query: 263 LMKSMHEP 270
M S P
Sbjct: 388 QMSSRRAP 395
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 105/218 (48%), Gaps = 17/218 (7%)
Query: 5 NVASWNAMLCGFVKDGDLSSARGVFDAMPEK----NVVSFTTMIDGYAKAGDMAAARFLF 60
+V ++ +++ G G L AR +F M N V +TT+I G+ K+ + +F
Sbjct: 292 DVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIF 351
Query: 61 EQATEKDVVA----WSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQL 116
+ ++K VVA ++ LI GY G+P+ A +VF +M S+ PD L+
Sbjct: 352 YEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCN 411
Query: 117 GHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKC--GNMDRALKLFKEM----PKRDL 170
G +E A + Y+ K +D+ +++ + + C G ++ A LF + K ++
Sbjct: 412 GKVEKALMIFEYMRKREMDI---NIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNV 468
Query: 171 VSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAF 208
++Y +MI G G +A LF M +G +P+E +
Sbjct: 469 ITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/296 (21%), Positives = 142/296 (47%), Gaps = 19/296 (6%)
Query: 5 NVASWNAMLCGFVKDGDLSSARGVFDAM----PEKNVVSFTTMIDGYAKAGDMAAA---- 56
NV ++ ++ K+ L+ A +F+ M NVV++ ++ G + G A
Sbjct: 187 NVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLL 246
Query: 57 RFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQL 116
R + ++ E +V+ ++ALI +V+ G+ +A +++ M +V PD F SL++
Sbjct: 247 RDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMY 306
Query: 117 GHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLV----S 172
G L+ A+ + Y+ + + + + L+ K ++ +K+F EM ++ +V +
Sbjct: 307 GLLDEARQM-FYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTIT 365
Query: 173 YCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMK 232
Y +IQG + G + A +FN M PD + ++L +G V++ F+ M+
Sbjct: 366 YTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMR 425
Query: 233 QKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMH----EPHAGAWGALL-GACK 283
++ + + + ++ + + G + DA++L S+ +P+ + ++ G C+
Sbjct: 426 KR-EMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCR 480
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/316 (26%), Positives = 153/316 (48%), Gaps = 26/316 (8%)
Query: 5 NVASWNAMLCGFVKDGDLSSARGVFDAMPEK-----NVVSFTTMIDGYAKAGDMAAARFL 59
N + ++ G K G S AR + M E+ + +S+ ++IDG+ K G+M +A
Sbjct: 547 NGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAA 606
Query: 60 FEQ----ATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQ 115
+E+ +V+ +++L++G +N + +QAL++ EM++K VK D +L+ +
Sbjct: 607 YEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCK 666
Query: 116 LGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKR----DLV 171
++E A + S + + ++ Q + +L+ GNM AL L+K+M K DL
Sbjct: 667 RSNMESASALFSELLEEGLNPSQP-IYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLG 725
Query: 172 SYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSM 231
+Y ++I GL G A L+ M GLVPDE+ +T+I+ S G + F+ M
Sbjct: 726 TYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEM 785
Query: 232 KQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHGDSDLG 291
K K ++P+ + ++ R G+L +A+ L M + GA
Sbjct: 786 K-KNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDI---------- 834
Query: 292 EIVANQLFELEPQNAA 307
+V+ Q+ L+P AA
Sbjct: 835 -LVSGQVGNLQPVRAA 849
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 124/275 (45%), Gaps = 17/275 (6%)
Query: 8 SWNAMLCGFVKDGDLSSARGVFDAMPEK----NVVSFTTMIDGYAKAGDMAAARFLFEQA 63
++ +++ VK G++ A + D M NVV+ T++I G+ K D+ +A LF++
Sbjct: 306 TYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKM 365
Query: 64 TEK----DVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSA-TSQLGH 118
++ + V +S LI + +NG+ +AL+ + +ME + P F + +++ H
Sbjct: 366 EKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKH 425
Query: 119 LELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKR----DLVSYC 174
E + D L V +L K G D A +L +M R ++VSY
Sbjct: 426 EEALKLFDESFETG---LANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYN 482
Query: 175 SMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQK 234
+++ G + A +F+++L +GL P+ ++I++ C + M
Sbjct: 483 NVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSS 542
Query: 235 YGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHE 269
I + + +++ L + G A EL+ +M E
Sbjct: 543 -NIEVNGVVYQTIINGLCKVGQTSKARELLANMIE 576
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 147/313 (46%), Gaps = 20/313 (6%)
Query: 5 NVASWNAMLCGFVKDGDLSSARGVFDAMP----EKNVVSFTTMIDGYAKAGDMAAARFLF 60
NV ++N ++ G+ K + + +M E N++S+ +I+G + G M F+
Sbjct: 239 NVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVL 298
Query: 61 EQATEK----DVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQL 116
+ + D V ++ LI GY + G +QAL + EM + P SL+ + +
Sbjct: 299 TEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKA 358
Query: 117 GHLELA-QWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKR----DLV 171
G++ A +++D + ++ + L+D ++ G M+ A ++ +EM +V
Sbjct: 359 GNMNRAMEFLDQMRVRGLCPNERTY--TTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVV 416
Query: 172 SYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSM 231
+Y ++I G + G EDA+ + M +GL PD V+++ +L+ S VDE + M
Sbjct: 417 TYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREM 476
Query: 232 KQKYGISPSPDHFACMVDLL---SRSGHLGDAY-ELMKSMHEPHAGAWGALLGACKLHGD 287
+K GI P ++ ++ R+ D Y E+++ P + AL+ A + GD
Sbjct: 477 VEK-GIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGD 535
Query: 288 SDLGEIVANQLFE 300
+ + N++ E
Sbjct: 536 LEKALQLHNEMVE 548
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 139/296 (46%), Gaps = 20/296 (6%)
Query: 6 VASWNAMLCGFVKDG-DLSSARGVFDAMPEK----NVVSFTTMIDGYAKAGDMAAARFLF 60
V S+NA+L ++ ++S A VF M E NV ++ +I G+ AG++ A LF
Sbjct: 169 VLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLF 228
Query: 61 EQATEK----DVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQL 116
++ K +VV ++ LI GY + + + K+ M K ++P+ +++ +
Sbjct: 229 DKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCRE 288
Query: 117 GHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDL----VS 172
G ++ +V + +++ L + L+ K GN +AL + EM + L ++
Sbjct: 289 GRMKEVSFVLTEMNRRGYSLDEV-TYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVIT 347
Query: 173 YCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMK 232
Y S+I + G A+ + M + GL P+E +T ++ S G ++E + + M
Sbjct: 348 YTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMN 407
Query: 233 QKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHE----PHAGAWGALL-GACK 283
G SPS + +++ +G + DA +++ M E P ++ +L G C+
Sbjct: 408 DN-GFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCR 462
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 123/253 (48%), Gaps = 26/253 (10%)
Query: 5 NVASWNAMLCGFVKDGDLSSARGVFDAMPEK----NVVSFTTMIDGYAKAGDMAAA---- 56
+V ++NA++ G G + A V + M EK +VVS++T++ G+ ++ D+ A
Sbjct: 414 SVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVK 473
Query: 57 RFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQL 116
R + E+ + D + +S+LI G+ + + +A ++ EM + PDEF +L++A
Sbjct: 474 REMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCME 533
Query: 117 GHLELA-QWVDSYVSKSSI-DLQQDHVIAALLDMNAKCGNMDRAL-KLFKE------MPK 167
G LE A Q + V K + D+ V+ L+ ++ R L KLF E +
Sbjct: 534 GDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTY 593
Query: 168 RDLVSYCS---------MIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHS 218
L+ CS +I+G + G +A ++F SML + PD A+ I++ +
Sbjct: 594 HTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRA 653
Query: 219 GLVDEGWNYFQSM 231
G + + + ++ M
Sbjct: 654 GDIRKAYTLYKEM 666
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/328 (21%), Positives = 142/328 (43%), Gaps = 51/328 (15%)
Query: 5 NVASWNAMLCGFVKDGDLSSARGVFDAMPEK----NVVSFTTMIDGYAKAGDMAAARFL- 59
N+ S+N ++ G ++G + V M + + V++ T+I GY K G+ A +
Sbjct: 274 NLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMH 333
Query: 60 ---FEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQL 116
V+ +++LI + G N+A++ +M + + P+E +L+ SQ
Sbjct: 334 AEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQK 393
Query: 117 GHLELAQWV----------------DSYVSKSSIDLQQDHVIAALLDMNAK--------- 151
G++ A V ++ ++ + + + IA L DM K
Sbjct: 394 GYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSY 453
Query: 152 -------CG--NMDRALKLFKEMPKR----DLVSYCSMIQGLSIHGCGEDAVRLFNSMLM 198
C ++D AL++ +EM ++ D ++Y S+IQG ++A L+ ML
Sbjct: 454 STVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLR 513
Query: 199 EGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLG 258
GL PDE +T ++ A G +++ M +K G+ P ++ +++ L++
Sbjct: 514 VGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEK-GVLPDVVTYSVLINGLNKQSRTR 572
Query: 259 DAYE-LMKSMHE---PHAGAWGALLGAC 282
+A L+K +E P + L+ C
Sbjct: 573 EAKRLLLKLFYEESVPSDVTYHTLIENC 600
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 120/243 (49%), Gaps = 25/243 (10%)
Query: 3 QRNVASWNAMLCGFVKDGDLSSARGVFDAMPEK----NVVSFTTMIDGYAKAGDMAAARF 58
+++V S+N +L K G + A + MP K NVVS++T+IDG+AKAG A
Sbjct: 371 EQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALN 430
Query: 59 LFEQ----ATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATS 114
LF + D V+++ L+S Y + G+ +AL + EM S +K D +L+
Sbjct: 431 LFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYG 490
Query: 115 QLGHLELAQWVDSYVSKSSIDLQQDHVI------AALLDMNAKCGNMDRALKLFKEMP-- 166
+ G + V K +++++HV+ + L+D +K G A+++F+E
Sbjct: 491 KQGKYD-------EVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSA 543
Query: 167 --KRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEG 224
+ D+V Y ++I L +G AV L + M EG+ P+ V + I+ A S +D
Sbjct: 544 GLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRS 603
Query: 225 WNY 227
+Y
Sbjct: 604 ADY 606
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 133/277 (48%), Gaps = 17/277 (6%)
Query: 5 NVASWNAMLCGFVKDG-DLSSARGVFDAMPEKNV----VSFTTMIDGYAKAGDMAAARFL 59
N+ ++NA++ K G + FD M V ++F +++ ++ G AAR L
Sbjct: 302 NLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNL 361
Query: 60 FEQAT----EKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQ 115
F++ T E+DV +++ L+ + GQ + A ++ +M K + P+ +++ ++
Sbjct: 362 FDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAK 421
Query: 116 LGHLELAQWVDSYVSKSSIDLQQDHV-IAALLDMNAKCGNMDRALKLFKEMP----KRDL 170
G + A ++ + + + D V LL + K G + AL + +EM K+D+
Sbjct: 422 AGRFDEA--LNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDV 479
Query: 171 VSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQS 230
V+Y +++ G G ++ ++F M E ++P+ + ++ ++ S GL E F+
Sbjct: 480 VTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFRE 539
Query: 231 MKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSM 267
K G+ ++ ++D L ++G +G A L+ M
Sbjct: 540 FKSA-GLRADVVLYSALIDALCKNGLVGSAVSLIDEM 575
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 86/196 (43%), Gaps = 11/196 (5%)
Query: 137 QQDHVIAALLDMNAKCGNMDRALKLFKEM----PKRDLVSYCSMIQGLSIHGCGEDAVRL 192
+Q + +A++ + G + A ++F+ + ++ ++I G E+A+ +
Sbjct: 231 EQGKLASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISV 290
Query: 193 FNSMLMEGLVPDEVAFTIILTACSHSGL-VDEGWNYFQSMKQKYGISPSPDHFACMVDLL 251
FNSM GL P+ V + ++ AC G+ + +F M Q+ G+ P F ++ +
Sbjct: 291 FNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEM-QRNGVQPDRITFNSLLAVC 349
Query: 252 SRSGHLGDAYELMKSMH----EPHAGAWGALLGACKLHGDSDLG-EIVANQLFELEPQNA 306
SR G A L M E ++ LL A G DL EI+A + N
Sbjct: 350 SRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNV 409
Query: 307 ANYILLSNIYAAAERW 322
+Y + + +A A R+
Sbjct: 410 VSYSTVIDGFAKAGRF 425
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 143/282 (50%), Gaps = 21/282 (7%)
Query: 5 NVASWNAMLCGFVKDGDLSSARGVFDAMPE----KNVVSFTTMIDGYAKAGDMAAARFLF 60
+V ++NA++ FVK+G A +++ M N+ ++T++I+G+ G + AR +F
Sbjct: 246 DVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMF 305
Query: 61 EQATEK----DVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQL 116
K DVVA+++LI+G+ + + + A+K+F EM K + + +L+ Q+
Sbjct: 306 YLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQV 365
Query: 117 GHLELAQWVDSYVSKSSI--DLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLV--- 171
G +AQ V S++ + +++ +V+ L N G + +AL +F++M KR++
Sbjct: 366 GKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYN---GKVKKALMIFEDMQKREMDGVA 422
Query: 172 ----SYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNY 227
+Y ++ GL +G E A+ +F M + + +TII+ +G V N
Sbjct: 423 PNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNL 482
Query: 228 FQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHE 269
F S+ K G+ P+ + M+ L R G +A+ L + M E
Sbjct: 483 FCSLPSK-GVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKE 523
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 122/260 (46%), Gaps = 18/260 (6%)
Query: 34 EKNVVSFTTMIDGYAKAGDMAAARFLFEQATE----KDVVAWSALISGYVQNGQPNQALK 89
E ++V+FT++I+G+ M A + Q E DVV ++ +I +NG N AL
Sbjct: 139 EPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALS 198
Query: 90 VFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIA--ALLD 147
+F +ME+ ++PD + SL++ G A + ++K I + VI AL+D
Sbjct: 199 LFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKI---KPDVITFNALID 255
Query: 148 MNAKCGNMDRALKLFKEMPKR----DLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVP 203
K G A +L+ EM + ++ +Y S+I G + GC ++A ++F M +G P
Sbjct: 256 AFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFP 315
Query: 204 DEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYEL 263
D VA+T ++ VD+ F M QK G++ + + ++ + G A E+
Sbjct: 316 DVVAYTSLINGFCKCKKVDDAMKIFYEMSQK-GLTGNTITYTTLIQGFGQVGKPNVAQEV 374
Query: 264 MKSMHE----PHAGAWGALL 279
M P+ + LL
Sbjct: 375 FSHMVSRGVPPNIRTYNVLL 394
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 139/279 (49%), Gaps = 15/279 (5%)
Query: 5 NVASWNAMLCGFVKDGDLSSARGVFDAMP----EKNVVSFTTMIDGYAKAGDMAAARFLF 60
+V + ++ K+G ++ A +FD M +VV +T++++G +G A L
Sbjct: 176 DVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLL 235
Query: 61 EQATEK----DVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQL 116
T++ DV+ ++ALI +V+ G+ A +++ EM ++ P+ F SL++
Sbjct: 236 RGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCME 295
Query: 117 GHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDL----VS 172
G ++ A+ + Y+ ++ +L++ KC +D A+K+F EM ++ L ++
Sbjct: 296 GCVDEARQM-FYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTIT 354
Query: 173 YCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMK 232
Y ++IQG G A +F+ M+ G+ P+ + ++L ++G V + F+ M+
Sbjct: 355 YTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQ 414
Query: 233 QKY--GISPSPDHFACMVDLLSRSGHLGDAYELMKSMHE 269
++ G++P+ + ++ L +G L A + + M +
Sbjct: 415 KREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRK 453
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 113/266 (42%), Gaps = 22/266 (8%)
Query: 67 DVVAWSALISGY---VQNG----QPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHL 119
D+ W Y ++NG Q N+AL +F M P L++ +++
Sbjct: 29 DLSFWVRAFCNYREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKF 88
Query: 120 ELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRAL------KLFKEMPKRDLVSY 173
++ + ++ + + D LL MN C + L K+ K + D+V++
Sbjct: 89 DVVINLCDHLQ--IMGVSHDLYTCNLL-MNCFCQSSQPYLASSFLGKMMKLGFEPDIVTF 145
Query: 174 CSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQ 233
S+I G + E+A+ + N M+ G+ PD V +T I+ + +G V+ + F M +
Sbjct: 146 TSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQM-E 204
Query: 234 KYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMH----EPHAGAWGALLGACKLHGDSD 289
YGI P + +V+ L SG DA L++ M +P + AL+ A G
Sbjct: 205 NYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFL 264
Query: 290 LGEIVANQLFELE-PQNAANYILLSN 314
E + N++ + N Y L N
Sbjct: 265 DAEELYNEMIRMSIAPNIFTYTSLIN 290
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 153/332 (46%), Gaps = 39/332 (11%)
Query: 5 NVASWNAMLCGFVKDGDLSSARGVFDAMPEK----NVVSFTTMIDGYAKAGDMAAARFLF 60
NV ++++++ G S A + M EK N+V+F +ID + K G A L+
Sbjct: 294 NVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLY 353
Query: 61 E----QATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQL 116
+ ++ + D+ +++L++G+ + + ++A ++F M SK+ PD +L+ +
Sbjct: 354 DDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKS 413
Query: 117 GHLELAQWVDSYVSKSSIDLQQDHVI-AALLDMNAKCGNMDRALKLFKEMPKR----DLV 171
+E + + S L D V L+ G+ D A K+FK+M D++
Sbjct: 414 KRVE--DGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIM 471
Query: 172 SYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSM 231
+Y ++ GL +G E A+ +F+ M + D +T ++ +G VD+GW+ F S+
Sbjct: 472 TYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSL 531
Query: 232 KQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHE----PHAGAWGALLGA------ 281
K G+ P+ + M+ L L +AY L+K M E P++G + L+ A
Sbjct: 532 SLK-GVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGD 590
Query: 282 -------------CKLHGDSDLGEIVANQLFE 300
C+ GD+ +VAN L +
Sbjct: 591 KAASAELIREMRSCRFVGDASTIGLVANMLHD 622
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 120/296 (40%), Gaps = 28/296 (9%)
Query: 7 ASWNAMLCGFVKDGDLSSARGVFDAM----PEKNVVSFTTMIDGYAKAGDMAAARFLFEQ 62
+ +L + D L A G+F M P ++V F ++ AK L E+
Sbjct: 51 GDYREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEK 110
Query: 63 ATEKDVV----AWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGH 118
++V ++ LI+ + + Q + AL + +M +P L SL++
Sbjct: 111 MQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKR 170
Query: 119 LELA-----QWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKR----D 169
+ A Q V+ +I +I L N A+ L M +R +
Sbjct: 171 ISDAVALVDQMVEMGYRPDTITFTT--LIHGLFLHNKA----SEAVALVDRMVQRGCQPN 224
Query: 170 LVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQ 229
LV+Y ++ GL G + A+ L N M + D V F I+ + VD+ N F+
Sbjct: 225 LVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFK 284
Query: 230 SMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHE----PHAGAWGALLGA 281
M+ K GI P+ ++ ++ L G DA +L+ M E P+ + AL+ A
Sbjct: 285 EMETK-GIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDA 339
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 78/264 (29%), Positives = 131/264 (49%), Gaps = 20/264 (7%)
Query: 5 NVASWNAMLCGFVKDGDLSSARGVFDAMPEKNV----VSFTTMIDGYAKAGDMAAARFLF 60
++ ++ +L G + G + A +F+ M E NV V++ MI+GY + GDM+ A
Sbjct: 506 SIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFL 565
Query: 61 EQATEKDVV----AWSALISGYVQNGQPNQALKVFLE-MESKNVKPDEFILVSLMSATSQ 115
++ TEK +V ++ LI G GQ ++A KVF++ + N + +E L+ +
Sbjct: 566 KEMTEKGIVPDTYSYRPLIHGLCLTGQASEA-KVFVDGLHKGNCELNEICYTGLLHGFCR 624
Query: 116 LGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRAL--KLFKEMPKRDL--- 170
G LE A V + + +DL D V +L ++ + DR L L KEM R L
Sbjct: 625 EGKLEEALSVCQEMVQRGVDL--DLVCYGVL-IDGSLKHKDRKLFFGLLKEMHDRGLKPD 681
Query: 171 -VSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQ 229
V Y SMI S G ++A +++ M+ EG VP+EV +T ++ +G V+E
Sbjct: 682 DVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEA-EVLC 740
Query: 230 SMKQKYGISPSPDHFACMVDLLSR 253
S Q P+ + C +D+L++
Sbjct: 741 SKMQPVSSVPNQVTYGCFLDILTK 764
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 135/287 (47%), Gaps = 34/287 (11%)
Query: 5 NVASWNAMLCGFVKDGDLSSARGVFDAMPEK----NVVSFTTMIDGYAKAGDMAAAR-FL 59
N +++ ++ F + G L +A M + +V + ++I+G+ K GD++AA F+
Sbjct: 401 NDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFM 460
Query: 60 FEQATEK---DVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQL 116
E +K VV +++L+ GY G+ N+AL+++ EM K + P + +L+S +
Sbjct: 461 AEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRA 520
Query: 117 GHL--------ELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKC--GNMDRALKLFKEMP 166
G + E+A+W +++ + V ++ + C G+M +A + KEM
Sbjct: 521 GLIRDAVKLFNEMAEW----------NVKPNRVTYNVM-IEGYCEEGDMSKAFEFLKEMT 569
Query: 167 KRDLV----SYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVD 222
++ +V SY +I GL + G +A + + +E+ +T +L G ++
Sbjct: 570 EKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLE 629
Query: 223 EGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHE 269
E + Q M Q+ G+ + ++D + + L+K MH+
Sbjct: 630 EALSVCQEMVQR-GVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHD 675
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/276 (22%), Positives = 123/276 (44%), Gaps = 16/276 (5%)
Query: 5 NVASWNAMLCGFVKDGDLSSARGVFDAMPEKNV----VSFTTMIDGYAKAGD----MAAA 56
N + +L GF ++G L A V M ++ V V + +IDG K D
Sbjct: 611 NEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLL 670
Query: 57 RFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQL 116
+ + ++ + D V ++++I + G +A ++ M ++ P+E ++++ +
Sbjct: 671 KEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKA 730
Query: 117 GHLELAQWVDSYVSK-SSIDLQQDHVIAALLDMNAKCG-NMDRALKLFKEMPK---RDLV 171
G + A+ + S + SS+ Q + LD+ K +M +A++L + K +
Sbjct: 731 GFVNEAEVLCSKMQPVSSVPNQVTY--GCFLDILTKGEVDMQKAVELHNAILKGLLANTA 788
Query: 172 SYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSM 231
+Y +I+G G E+A L M+ +G+ PD + +T ++ V + + SM
Sbjct: 789 TYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSM 848
Query: 232 KQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSM 267
+K GI P + ++ +G +G A EL M
Sbjct: 849 TEK-GIRPDRVAYNTLIHGCCVAGEMGKATELRNEM 883
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/288 (21%), Positives = 128/288 (44%), Gaps = 25/288 (8%)
Query: 40 FTTMIDGYAKAGDMAAARFLFEQATEK-----DVVAWSALISGYVQNGQPNQALKVFLEM 94
F +I Y ++ + +F+ K +V SAL+ G V+ A+++F +M
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDM 218
Query: 95 ESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIA--ALLDMNAKC 152
S ++PD +I ++ + +L L A+ + +++ + D+ +++ L+D K
Sbjct: 219 VSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDV---NIVPYNVLIDGLCKK 275
Query: 153 GNMDRALKLFKEMPKRDL----VSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAF 208
+ A+ + K++ +DL V+YC+++ GL E + + + ML P E A
Sbjct: 276 QKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAV 335
Query: 209 TIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMH 268
+ ++ G ++E N + + +G+SP+ + ++D L + +A L M
Sbjct: 336 SSLVEGLRKRGKIEEALNLVKRVVD-FGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMG 394
Query: 269 E----PHAGAWGALLGACKLHGDSD-----LGEIVANQL-FELEPQNA 306
+ P+ + L+ G D LGE+V L + P N+
Sbjct: 395 KIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNS 442
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 125/248 (50%), Gaps = 16/248 (6%)
Query: 5 NVASWNAMLCGFVKDGDLSSARGVFDAMPEK----NVVSFTTMIDGYAKAGDMAAARFLF 60
V ++N M+ K+GD+ +ARG+F+ M + + V++ +MIDG+ K G + F
Sbjct: 261 TVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFF 320
Query: 61 EQ----ATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQL 116
E+ E DV+ ++ALI+ + + G+ L+ + EM+ +KP+ +L+ A +
Sbjct: 321 EEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKE 380
Query: 117 GHLELAQWVDSYVSKSSIDL-QQDHVIAALLDMNAKCGNMDRALKLFKEMPKR----DLV 171
G ++ Q + YV + L ++ +L+D N K GN+ A +L EM + ++V
Sbjct: 381 GMMQ--QAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVV 438
Query: 172 SYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSM 231
+Y ++I GL ++A LF M G++P+ ++ ++ + +D +
Sbjct: 439 TYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNEL 498
Query: 232 KQKYGISP 239
K + GI P
Sbjct: 499 KGR-GIKP 505
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 125/269 (46%), Gaps = 22/269 (8%)
Query: 5 NVASWNAMLCGFVKDGDLSSARGVFDAMPEKNV----VSFTTMIDGYAKAGDMAAARFLF 60
N+AS+NA++ GFVK ++ A + + + + + + + T I G + AA+ +
Sbjct: 471 NLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVM 530
Query: 61 EQATEKDVVA----WSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQL 116
+ E + A ++ L+ Y ++G P + L + EM+ ++ E +V+ L
Sbjct: 531 NEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDI---EVTVVTFCVLIDGL 587
Query: 117 GHLELAQWVDSYVSKSSID--LQQDHVI-AALLDMNAKCGNMDRALKLFKEMPKRDLV-- 171
+L Y ++ S D LQ + I A++D K ++ A LF++M ++ LV
Sbjct: 588 CKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPD 647
Query: 172 --SYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQ 229
+Y S++ G G +A+ L + M G+ D +A+T ++ SH + + ++ +
Sbjct: 648 RTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLE 707
Query: 230 SMKQKYGISPSPDHFACMVDLLSRSGHLG 258
M G PD C + +L + LG
Sbjct: 708 EM---IGEGIHPDEVLC-ISVLKKHYELG 732
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 75/140 (53%), Gaps = 8/140 (5%)
Query: 3 QRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVV----SFTTMIDGYAKAGDMAAARF 58
Q N A + AM+ G KD + +A +F+ M +K +V ++T+++DG K G++ A
Sbjct: 610 QANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALA 669
Query: 59 LFEQATEK----DVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATS 114
L ++ E D++A+++L+ G Q +A EM + + PDE + +S++
Sbjct: 670 LRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHY 729
Query: 115 QLGHLELAQWVDSYVSKSSI 134
+LG ++ A + SY+ K +
Sbjct: 730 ELGCIDEAVELQSYLMKHQL 749
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 148/302 (49%), Gaps = 24/302 (7%)
Query: 1 MPQR-NVASWNAMLCGFVKDGDLSSARGVFDAMPE----KNVVSFTTMIDGYAKAGDMAA 55
M QR ++ + + ++ G G +S A + D M E + V++ +++ K+G+ A
Sbjct: 169 MKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSAL 228
Query: 56 ARFLFEQATEKD----VVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMS 111
A LF + E++ VV +S +I ++G + AL +F EME K +K D SL+
Sbjct: 229 ALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIG 288
Query: 112 ATSQLGHLE-LAQWVDSYVSKSSIDLQQDHV-IAALLDMNAKCGNMDRALKLFKEMPKR- 168
G + A+ + + ++ I D V +AL+D+ K G + A +L+ EM R
Sbjct: 289 GLCNDGKWDDGAKMLREMIGRNII---PDVVTFSALIDVFVKEGKLLEAKELYNEMITRG 345
Query: 169 ---DLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGW 225
D ++Y S+I G C +A ++F+ M+ +G PD V ++I++ + + VD+G
Sbjct: 346 IAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGM 405
Query: 226 NYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHE----PHAGAWGALL-G 280
F+ + K G+ P+ + +V +SG L A EL + M P +G LL G
Sbjct: 406 RLFREISSK-GLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDG 464
Query: 281 AC 282
C
Sbjct: 465 LC 466
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 136/310 (43%), Gaps = 62/310 (20%)
Query: 34 EKNVVSFTTMIDGYAKAGDMAAARFLFEQATE----KDVVAWSALISGYVQNGQPNQALK 89
E + ++F+T+++G+ G ++ A L ++ E D+V S LI+G G+ ++AL
Sbjct: 137 EPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALV 196
Query: 90 VFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMN 149
+ M +PDE +L+
Sbjct: 197 LIDRMVEYGFQPDEV------------------------------------TYGPVLNRL 220
Query: 150 AKCGNMDRALKLFKEMPKRDL----VSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDE 205
K GN AL LF++M +R++ V Y +I L G +DA+ LFN M M+G+ D
Sbjct: 221 CKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADV 280
Query: 206 VAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMK 265
V ++ ++ + G D+G + M + I P F+ ++D+ + G L +A EL
Sbjct: 281 VTYSSLIGGLCNDGKWDDGAKMLREMIGR-NIIPDVVTFSALIDVFVKEGKLLEAKELYN 339
Query: 266 SMHE----PHAGAWGALL-GACKLHGDSDLGEIVANQLFEL------EPQNAANYILLSN 314
M P + +L+ G CK ++ L E ANQ+F+L EP + Y +L N
Sbjct: 340 EMITRGIAPDTITYNSLIDGFCK---ENCLHE--ANQMFDLMVSKGCEP-DIVTYSILIN 393
Query: 315 IYAAAERWID 324
Y A+R D
Sbjct: 394 SYCKAKRVDD 403
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 123/269 (45%), Gaps = 20/269 (7%)
Query: 1 MPQRNVA----SWNAMLCGFVKDGDLSSARGVFDAMPEK----NVVSFTTMIDGYAKAGD 52
M R +A ++N+++ GF K+ L A +FD M K ++V+++ +I+ Y KA
Sbjct: 341 MITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKR 400
Query: 53 MAAARFLFEQATEK----DVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVS 108
+ LF + + K + + ++ L+ G+ Q+G+ N A ++F EM S+ V P
Sbjct: 401 VDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGI 460
Query: 109 LMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMP-- 166
L+ G L A + + KS + L + ++ +D A LF +
Sbjct: 461 LLDGLCDNGELNKALEIFEKMQKSRMTLGI-GIYNIIIHGMCNASKVDDAWSLFCSLSDK 519
Query: 167 --KRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTA-CSHSGLVDE 223
K D+V+Y MI GL G +A LF M +G PD+ + I++ A SGL+
Sbjct: 520 GVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLI-S 578
Query: 224 GWNYFQSMKQKYGISPSPDHFACMVDLLS 252
+ MK G S ++D+LS
Sbjct: 579 SVELIEEMKV-CGFSADSSTIKMVIDMLS 606
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 90/344 (26%), Positives = 149/344 (43%), Gaps = 59/344 (17%)
Query: 1 MPQRNV----ASWNAMLCGFVKDGDLSSARGVFDAMPEK----NVVSFTTMIDGYAKAG- 51
M +R + ++ ++ G KDG L +A +F+ M K +++ +TT+I G+ AG
Sbjct: 238 MEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGR 297
Query: 52 -DMAAA--RFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVS 108
D A R + ++ DVVA+SALI +V+ G+ +A ++ EM + + PD S
Sbjct: 298 WDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTS 357
Query: 109 LMSATSQLGHLELA-QWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPK 167
L+ + L+ A +D VSK L++ K +D L+LF++M
Sbjct: 358 LIDGFCKENQLDKANHMLDLMVSKGCG--PNIRTFNILINGYCKANLIDDGLELFRKMSL 415
Query: 168 R----DLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSG---- 219
R D V+Y ++IQG G E A LF M+ + PD V++ I+L +G
Sbjct: 416 RGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEK 475
Query: 220 -------------------------------LVDEGWNYFQSMKQKYGISPSPDHFACMV 248
VD+ W+ F S+ K G+ P + M+
Sbjct: 476 ALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLK-GVKPDVKTYNIMI 534
Query: 249 DLLSRSGHLGDAYELMKSM----HEPHAGAWGALLGACKLHGDS 288
L + G L +A L + M H P+ + L+ A GD+
Sbjct: 535 GGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDA 578
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 121/264 (45%), Gaps = 17/264 (6%)
Query: 34 EKNVVSFTTMIDGYAKAGDMAAARFLFEQATE----KDVVAWSALISGYVQNGQPNQALK 89
E + V+F+T+I+G G ++ A L ++ E ++ +AL++G NG+ + A+
Sbjct: 139 EPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVL 198
Query: 90 VFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHV-IAALLDM 148
+ M +P+E ++ + G LA + + + I L D V + ++D
Sbjct: 199 LIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKL--DAVKYSIIIDG 256
Query: 149 NAKCGNMDRALKLFKEMP----KRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPD 204
K G++D A LF EM K D++ Y ++I+G G +D +L M+ + PD
Sbjct: 257 LCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPD 316
Query: 205 EVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELM 264
VAF+ ++ G + E + M Q+ GISP + ++D + L A ++
Sbjct: 317 VVAFSALIDCFVKEGKLREAEELHKEMIQR-GISPDTVTYTSLIDGFCKENQLDKANHML 375
Query: 265 KSMHE----PHAGAWGALL-GACK 283
M P+ + L+ G CK
Sbjct: 376 DLMVSKGCGPNIRTFNILINGYCK 399
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 137/298 (45%), Gaps = 19/298 (6%)
Query: 3 QRNVASWNAMLCGFVKDGDLSSARGVFDAMPEK----NVVSFTTMIDGYAKAGDMAAARF 58
Q N ++N ++ G S A + D M K ++V++ +++G K GD A
Sbjct: 183 QPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFN 242
Query: 59 LFEQ----ATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATS 114
L + E V+ ++ +I G + + AL +F EME+K ++P+ SL+S
Sbjct: 243 LLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLC 302
Query: 115 QLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDL---- 170
G A + S + + I+ +AL+D K G + A KL+ EM KR +
Sbjct: 303 NYGRWSDASRLLSDMIERKIN-PDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSI 361
Query: 171 VSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQS 230
V+Y S+I G +H ++A ++F M+ + PD V + ++ V+EG F+
Sbjct: 362 VTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFRE 421
Query: 231 MKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHE----PHAGAWGALL-GACK 283
M Q+ G+ + + ++ L ++G A E+ K M P+ + LL G CK
Sbjct: 422 MSQR-GLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCK 478
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 145/306 (47%), Gaps = 26/306 (8%)
Query: 5 NVASWNAMLCGFVKDGDLSSARGVFDAMPEKNV----VSFTTMIDGYAKAGDMAAARFLF 60
+V +++A++ FVK+G L A ++D M ++++ V+++++I+G+ + A+ +F
Sbjct: 325 DVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMF 384
Query: 61 EQATEK----DVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQL 116
E K DVV ++ LI G+ + + + ++VF EM + + + L+ Q
Sbjct: 385 EFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQA 444
Query: 117 GHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRD----LVS 172
G ++AQ + + + LLD K G +++A+ +F+ + + + +
Sbjct: 445 GDCDMAQEIFKEMVSDGVP-PNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYT 503
Query: 173 YCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMK 232
Y MI+G+ G ED LF ++ ++G+ PD VA+ +++ G +E F+ MK
Sbjct: 504 YNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMK 563
Query: 233 QKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHGDSDLGE 292
+ G P+ + ++ R G + EL+K M +C GD+
Sbjct: 564 ED-GTLPNSGCYNTLIRARLRDGDREASAELIKEMR------------SCGFAGDASTIG 610
Query: 293 IVANQL 298
+V N L
Sbjct: 611 LVTNML 616
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 138/296 (46%), Gaps = 19/296 (6%)
Query: 5 NVASWNAMLCGFVKDGDLSSARGVFDAM----PEKNVVSFTTMIDGYAKAGDMAAARFLF 60
N +++ ++ F + L A V M E N+V+ +++++GY + ++ A L
Sbjct: 115 NHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALV 174
Query: 61 EQ----ATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQL 116
+Q + + V ++ LI G + + ++A+ + M +K +PD +++ +
Sbjct: 175 DQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKR 234
Query: 117 GHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKR----DLVS 172
G +LA + + + + ++ + ++D K +MD AL LFKEM + ++V+
Sbjct: 235 GDTDLAFNLLNKMEQGKLE-PGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVT 293
Query: 173 YCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMK 232
Y S+I L +G DA RL + M+ + PD F+ ++ A G + E + M
Sbjct: 294 YSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMV 353
Query: 233 QKYGISPSPDHFACMVDLLSRSGHLGDA---YELMKSMH-EPHAGAWGALL-GACK 283
++ I PS ++ +++ L +A +E M S H P + L+ G CK
Sbjct: 354 KR-SIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCK 408
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 132/244 (54%), Gaps = 17/244 (6%)
Query: 5 NVASWNAMLCGFVKDGDLSSARGVFDAMP----EKNVVSFTTMIDGYAKAGDMAAARFLF 60
NV +++A+L FVK+G + A+ +F+ M + ++V+++++I+G + A +F
Sbjct: 259 NVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMF 318
Query: 61 EQATEK----DVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQL 116
+ K DVV+++ LI+G+ + + +K+F EM + + + +L+ Q
Sbjct: 319 DLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQA 378
Query: 117 GHLELAQWVDSYVSKSSI--DLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKR----DL 170
G ++ AQ S + I D+ +++ L N G +++AL +F++M KR D+
Sbjct: 379 GDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDN---GELEKALVIFEDMQKREMDLDI 435
Query: 171 VSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQS 230
V+Y ++I+G+ G E+A LF S+ ++GL PD V +T +++ GL+ E +
Sbjct: 436 VTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTK 495
Query: 231 MKQK 234
MKQ+
Sbjct: 496 MKQE 499
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 136/276 (49%), Gaps = 27/276 (9%)
Query: 34 EKNVVSFTTMIDGYAKAGDMAAARFLFEQATE----KDVVAWSALISGYVQNGQPNQALK 89
E + V+ ++++G+ + ++ A L ++ E D+VA++A+I + + N A
Sbjct: 152 EPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFD 211
Query: 90 VFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQ--DHVI--AAL 145
F E+E K ++P+ +L++ G ++W D+ S + ++ +VI +AL
Sbjct: 212 FFKEIERKGIRPNVVTYTALVN-----GLCNSSRWSDAARLLSDMIKKKITPNVITYSAL 266
Query: 146 LDMNAKCGNMDRALKLFKEMPKR----DLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGL 201
LD K G + A +LF+EM + D+V+Y S+I GL +H ++A ++F+ M+ +G
Sbjct: 267 LDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGC 326
Query: 202 VPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAY 261
+ D V++ ++ + V++G F+ M Q+ G+ + + ++ ++G + A
Sbjct: 327 LADVVSYNTLINGFCKAKRVEDGMKLFREMSQR-GLVSNTVTYNTLIQGFFQAGDVDKAQ 385
Query: 262 ELMKSMH----EPHAGAWGALLGACKLHGDSDLGEI 293
E M P + LLG G D GE+
Sbjct: 386 EFFSQMDFFGISPDIWTYNILLG-----GLCDNGEL 416
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 75/157 (47%), Gaps = 13/157 (8%)
Query: 152 CGNMDRALKLFKEMPKR----DLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVA 207
C + AL + +M K D V+ S++ G DAV L + M+ G PD VA
Sbjct: 133 CFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVA 192
Query: 208 FTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSM 267
+ I+ + + V++ +++F+ +++K GI P+ + +V+ L S DA L+ M
Sbjct: 193 YNAIIDSLCKTKRVNDAFDFFKEIERK-GIRPNVVTYTALVNGLCNSSRWSDAARLLSDM 251
Query: 268 HE----PHAGAWGALLGACKLHGDSDLGEIVANQLFE 300
+ P+ + ALL A +G + A +LFE
Sbjct: 252 IKKKITPNVITYSALLDAFVKNGKV----LEAKELFE 284
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 83/346 (23%), Positives = 152/346 (43%), Gaps = 64/346 (18%)
Query: 8 SWNAMLCGFVKDGDLSSARGVFDAMPEK----NVVSFTTMIDGYAKAGDMAAARFLFEQ- 62
++ ++ G S A + D M ++ ++V++ T+++G K GD+ A L ++
Sbjct: 190 TFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKM 249
Query: 63 ---ATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHL 119
E DVV ++ +I G + + AL +F EM++K ++PD F SL+S G
Sbjct: 250 EKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYG-- 307
Query: 120 ELAQWVDSYVSKSSIDLQQDHV------IAALLDMNAKCGNMDRALKLFKEMPKR----D 169
+W D+ S+ D+ + + +AL+D K G + A KL+ EM KR D
Sbjct: 308 ---RWSDA--SRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 362
Query: 170 LVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQ 229
+ +Y S+I G +H ++A +F M+ + P+ V ++ ++ + V+EG F+
Sbjct: 363 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFR 422
Query: 230 SMKQK----------------------------------YGISPSPDHFACMVDLLSRSG 255
M Q+ G+ P+ + ++D L ++G
Sbjct: 423 EMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNG 482
Query: 256 HLGDA---YE-LMKSMHEPHAGAWGALL-GACKLHGDSDLGEIVAN 296
L A +E L +S EP + ++ G CK D E+ N
Sbjct: 483 KLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCN 528
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/307 (23%), Positives = 147/307 (47%), Gaps = 28/307 (9%)
Query: 5 NVASWNAMLCGFVKDGDLSSARGVFDAMPEK----NVVSFTTMIDGYAKAGDMAAARFLF 60
NV +++A++ FVK+G L A ++D M ++ ++ +++++I+G+ + A+ +F
Sbjct: 327 NVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF 386
Query: 61 EQATEKD----VVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQL 116
E KD VV +S LI G+ + + + +++F EM + + + +L+ Q
Sbjct: 387 ELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQA 446
Query: 117 GHLELAQWVDSYVSKSSIDLQQDHVI-AALLDMNAKCGNMDRALKLFKEMPKR----DLV 171
+ AQ V + S+ + + + LLD K G + +A+ +F+ + + D+
Sbjct: 447 RDCDNAQMV--FKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIY 504
Query: 172 SYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSM 231
+Y MI+G+ G ED LF ++ ++G+ P+ +A+ +++ G +E + + M
Sbjct: 505 TYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKM 564
Query: 232 KQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHGDSDLG 291
K+ G P+ + ++ R G + EL+K M +C GD+
Sbjct: 565 KED-GPLPNSGTYNTLIRARLRDGDREASAELIKEMR------------SCGFAGDASTI 611
Query: 292 EIVANQL 298
+V N L
Sbjct: 612 GLVTNML 618
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 121/273 (44%), Gaps = 25/273 (9%)
Query: 65 EKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHL-ELAQ 123
E D+V S+L++GY + + + A+ + +M KPD F +L+ E
Sbjct: 150 EPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVA 209
Query: 124 WVDSYVSKSSIDLQQDHVIAALLDMNAKC--GNMDRALKLFKEMPK----RDLVSYCSMI 177
VD V + Q D V + +N C G++D AL L K+M K D+V Y ++I
Sbjct: 210 LVDQMVQRGC---QPDLVTYGTV-VNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTII 265
Query: 178 QGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGI 237
GL + +DA+ LF M +G+ PD ++ +++ + G + M ++ I
Sbjct: 266 DGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIER-KI 324
Query: 238 SPSPDHFACMVDLLSRSGHLGDAY----ELMKSMHEPHAGAWGALLGACKLHGDSDLGEI 293
+P+ F+ ++D + G L +A E++K +P + +L+ +H D
Sbjct: 325 NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD---- 380
Query: 294 VANQLFELEPQ-----NAANYILLSNIYAAAER 321
A +FEL N Y L + A+R
Sbjct: 381 EAKHMFELMISKDCFPNVVTYSTLIKGFCKAKR 413
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 142/306 (46%), Gaps = 26/306 (8%)
Query: 5 NVASWNAMLCGFVKDGDLSSARGVFDAMPEK----NVVSFTTMIDGYAKAGDMAAARFLF 60
NV ++N+++ F K+G L A +FD M ++ N+V++ ++I+G+ + A+ +F
Sbjct: 309 NVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIF 368
Query: 61 EQATEKD----VVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQL 116
KD VV ++ LI+G+ + + +++F +M + + + +L+ Q
Sbjct: 369 TLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQA 428
Query: 117 GHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKR----DLVS 172
+ AQ V + + LLD K G +++A+ +F+ + K D+ +
Sbjct: 429 SDCDNAQMVFKQMVSDGVH-PNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYT 487
Query: 173 YCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMK 232
Y M +G+ G ED LF S+ ++G+ PD +A+ +++ GL +E + F MK
Sbjct: 488 YNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMK 547
Query: 233 QKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHGDSDLGE 292
+ G P + ++ R G + EL+K M +C+ GD+
Sbjct: 548 ED-GPLPDSGTYNTLIRAHLRDGDKAASAELIKEMR------------SCRFAGDASTYG 594
Query: 293 IVANQL 298
+V + L
Sbjct: 595 LVTDML 600
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/337 (23%), Positives = 148/337 (43%), Gaps = 66/337 (19%)
Query: 5 NVASWNAMLCGFVKDGDLSSARGVFDAMPE----KNVVSFTTMIDGYAKAGDMAAARFLF 60
++ + N++L GF +S A + D M E + V+FTT++ G + + A L
Sbjct: 134 SIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALV 193
Query: 61 EQATEK----DVVAWSALISGYVQNGQPN------------------------------- 85
E+ K D+V + A+I+G + G+P+
Sbjct: 194 ERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKY 253
Query: 86 ----QALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHV 141
AL +F EM++K ++PD F SL+S G +W D+ S+ D+ + +
Sbjct: 254 RHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYG-----RWSDA--SRLLSDMLERKI 306
Query: 142 ------IAALLDMNAKCGNMDRALKLFKEMPKR----DLVSYCSMIQGLSIHGCGEDAVR 191
+L+D AK G + A KLF EM +R ++V+Y S+I G +H ++A +
Sbjct: 307 NPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQ 366
Query: 192 LFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLL 251
+F M+ + +PD V + ++ + V +G F+ M ++ G+ + + ++
Sbjct: 367 IFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRR-GLVGNTVTYTTLIHGF 425
Query: 252 SRSGHLGDAYELMKSM----HEPHAGAWGALL-GACK 283
++ +A + K M P+ + LL G CK
Sbjct: 426 FQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCK 462
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 137/286 (47%), Gaps = 19/286 (6%)
Query: 5 NVASWNAMLCGFVKDGDLSSARGVFDAMPE----KNVVSFTTMIDGYAKAGDM----AAA 56
N ++ A + G+++ + +SA M E N V T +I+ Y K G + +A
Sbjct: 521 NAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAY 580
Query: 57 RFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQL 116
R + +Q D ++ L++G +N + + A ++F EM K + PD F L++ S+L
Sbjct: 581 RSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKL 640
Query: 117 GHLELAQWV-DSYVSKSSIDLQQDHVI-AALLDMNAKCGNMDRALKLFKEMPKRDL---- 170
G+++ A + D V + L + +I LL + G +++A +L EM + L
Sbjct: 641 GNMQKASSIFDEMVEEG---LTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNA 697
Query: 171 VSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQS 230
V+YC++I G G +A RLF+ M ++GLVPD +T ++ C V+ F +
Sbjct: 698 VTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGT 757
Query: 231 MKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWG 276
K+ S +P F +++ + + G E++ + + +G
Sbjct: 758 NKKGCASSTAP--FNALINWVFKFGKTELKTEVLNRLMDGSFDRFG 801
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 121/267 (45%), Gaps = 51/267 (19%)
Query: 5 NVASWNAMLCGFVKDGDLSSARGVFDAMPEK----NVVSFTTMIDGYAKAGDMAAARFLF 60
+V S+ ++ GF K G++ A +FD M E+ NV+ + ++ G+ ++G++ A+ L
Sbjct: 626 DVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELL 685
Query: 61 EQATEK----DVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQL 116
++ + K + V + +I GY ++G +A ++F EM+ K + PD F+ +L+ +L
Sbjct: 686 DEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRL 745
Query: 117 GHLE----------------------LAQWVDSYVSKSSIDLQ----------------Q 138
+E L WV + K+ + +
Sbjct: 746 NDVERAITIFGTNKKGCASSTAPFNALINWVFKF-GKTELKTEVLNRLMDGSFDRFGKPN 804
Query: 139 DHVIAALLDMNAKCGNMDRALKLFKEMPKRDL----VSYCSMIQGLSIHGCGEDAVRLFN 194
D ++D K GN++ A +LF +M +L ++Y S++ G G + +F+
Sbjct: 805 DVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFD 864
Query: 195 SMLMEGLVPDEVAFTIILTACSHSGLV 221
+ G+ PD + +++I+ A G+
Sbjct: 865 EAIAAGIEPDHIMYSVIINAFLKEGMT 891
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/351 (20%), Positives = 153/351 (43%), Gaps = 59/351 (16%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVV----SFTTMIDGYAKAGDMAAA 56
+PQ ++ +++ G+ ++ ++ + M ++N+V ++ T++ G +GD+ A
Sbjct: 379 IPQ--AQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGA 436
Query: 57 RFLFEQ----ATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSA 112
+ ++ +VV ++ LI ++QN + A++V EM+ + + PD F SL+
Sbjct: 437 YNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIG 496
Query: 113 TSQLGHLELAQ--------------------WVDSYVSKSSIDLQQDHV----------- 141
S+ ++ A+ ++ Y+ S +V
Sbjct: 497 LSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPN 556
Query: 142 ---IAALLDMNAKCGNMDRALKLFKEMPKR----DLVSYCSMIQGLSIHGCGEDAVRLFN 194
L++ K G + A ++ M + D +Y ++ GL + +DA +F
Sbjct: 557 KVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFR 616
Query: 195 SMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRS 254
M +G+ PD ++ +++ S G + + + F M ++ G++P+ + ++ RS
Sbjct: 617 EMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEE-GLTPNVIIYNMLLGGFCRS 675
Query: 255 GHLGDAYELMKSMH----EPHAGAWGALL-GACKLHGDSDLGEIVANQLFE 300
G + A EL+ M P+A + ++ G CK DL E A +LF+
Sbjct: 676 GEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCK---SGDLAE--AFRLFD 721
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 110/250 (44%), Gaps = 24/250 (9%)
Query: 28 VFDAMPEKNVV----SFTTMIDGYAKAGDMAAAR-FLFEQATEKDVVAWSALISGYVQNG 82
V+ M E+NVV ++ +I + +AG++ + LF+ TEK+ + + G
Sbjct: 208 VYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFK--TEKEFRTATLNVDG----- 260
Query: 83 QPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQD-HV 141
ALK+ M K + P ++ L+ ++ LE A+ + V S+ + D H
Sbjct: 261 ----ALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSL--LVEMDSLGVSLDNHT 314
Query: 142 IAALLDMNAKCGNMDRALKLFKEMPKRDL----VSYCSMIQGLSIHGCGEDAVRLFNSML 197
+ L+D K N D A L EM + Y I +S G E A LF+ M+
Sbjct: 315 YSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMI 374
Query: 198 MEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHL 257
GL+P A+ ++ V +G+ MK++ I SP + +V + SG L
Sbjct: 375 ASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKR-NIVISPYTYGTVVKGMCSSGDL 433
Query: 258 GDAYELMKSM 267
AY ++K M
Sbjct: 434 DGAYNIVKEM 443
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 76/149 (51%), Gaps = 8/149 (5%)
Query: 27 GVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKD----VVAWSALISGYVQNG 82
G FD + N V++ MID K G++ AA+ LF Q + V+ +++L++GY + G
Sbjct: 795 GSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMG 854
Query: 83 QPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELA-QWVDSYVSKSSIDLQQDHV 141
+ + VF E + ++PD + +++A + G A VD +K+++D
Sbjct: 855 RRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLS 914
Query: 142 IA---ALLDMNAKCGNMDRALKLFKEMPK 167
I+ ALL AK G M+ A K+ + M +
Sbjct: 915 ISTCRALLSGFAKVGEMEVAEKVMENMVR 943
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 131/291 (45%), Gaps = 30/291 (10%)
Query: 5 NVASWNAMLCGFVKDGDLSSARGVFDAMPEK----NVVSFTTMIDGYAKAGDMAAA---- 56
+V ++N+++ G K G++ A V D M + N V++ T+I K + A
Sbjct: 329 DVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELA 388
Query: 57 RFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQL 116
R L + DV +++LI G A+++F EM SK +PDEF L+ +
Sbjct: 389 RVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSK 448
Query: 117 GHLE-----LAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMP----K 167
G L+ L Q S ++S I L+D K A ++F EM
Sbjct: 449 GKLDEALNMLKQMELSGCARSVITYN------TLIDGFCKANKTREAEEIFDEMEVHGVS 502
Query: 168 RDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNY 227
R+ V+Y ++I GL EDA +L + M+MEG PD+ + +LT G + + +
Sbjct: 503 RNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADI 562
Query: 228 FQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMH------EPHA 272
Q+M G P + ++ L ++G + A +L++S+ PHA
Sbjct: 563 VQAMTSN-GCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHA 612
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/321 (21%), Positives = 144/321 (44%), Gaps = 22/321 (6%)
Query: 8 SWNAMLCGFVKDGDLSSARGVFDAMPEKNV----VSFTTMIDGYAKAGDMA-AARFLFEQ 62
++ ++ G++++GDL A + + M E VS ++ G+ K G + A F+ E
Sbjct: 226 TFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEM 285
Query: 63 ATE----KDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGH 118
+ + D ++ L++G + G A+++ M + PD + S++S +LG
Sbjct: 286 SNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGE 345
Query: 119 L-ELAQWVDSYVSK--SSIDLQQDHVIAALLDMN--AKCGNMDRALKLFKEMPKRDLVSY 173
+ E + +D +++ S + + +I+ L N + + R L +P D+ ++
Sbjct: 346 VKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILP--DVCTF 403
Query: 174 CSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQ 233
S+IQGL + A+ LF M +G PDE + +++ + G +DE N + M+
Sbjct: 404 NSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMEL 463
Query: 234 KYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMH----EPHAGAWGALL-GACKLHGDS 288
G + S + ++D ++ +A E+ M ++ + L+ G CK
Sbjct: 464 S-GCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVE 522
Query: 289 DLGEIVANQLFELEPQNAANY 309
D +++ + E + + Y
Sbjct: 523 DAAQLMDQMIMEGQKPDKYTY 543
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 101/216 (46%), Gaps = 17/216 (7%)
Query: 4 RNVASWNAMLCGFVKDGDLSSARGVFDAMP----EKNVVSFTTMIDGYAKAGDMAAARFL 59
R+V ++N ++ GF K A +FD M +N V++ T+IDG K+ + A L
Sbjct: 468 RSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQL 527
Query: 60 FEQ----ATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQ 115
+Q + D +++L++ + + G +A + M S +PD +L+S +
Sbjct: 528 MDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCK 587
Query: 116 LGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKR-----DL 170
G +E+A + + I+L H ++ + A+ LF+EM ++ D
Sbjct: 588 AGRVEVASKLLRSIQMKGINLTP-HAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDA 646
Query: 171 VSYCSMIQGLSIHGCG--EDAVRLFNSMLMEGLVPD 204
VSY + +GL +G G +AV +L +G VP+
Sbjct: 647 VSYRIVFRGLC-NGGGPIREAVDFLVELLEKGFVPE 681
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/248 (20%), Positives = 106/248 (42%), Gaps = 15/248 (6%)
Query: 5 NVASWNAMLCGFVKDGDLSSARGVFDAMPEKNV----VSFTTMIDGYAKAGDMAAARFLF 60
+V ++N+++ G + A +F+ M K ++ +ID G + A +
Sbjct: 399 DVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNML 458
Query: 61 EQ----ATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQL 116
+Q + V+ ++ LI G+ + + +A ++F EME V + +L+ +
Sbjct: 459 KQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKS 518
Query: 117 GHLE-LAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKR----DLV 171
+E AQ +D + + + +LL + G++ +A + + M D+V
Sbjct: 519 RRVEDAAQLMDQMIMEGQ--KPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIV 576
Query: 172 SYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSM 231
+Y ++I GL G E A +L S+ M+G+ A+ ++ E N F+ M
Sbjct: 577 TYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREM 636
Query: 232 KQKYGISP 239
++ P
Sbjct: 637 LEQNEAPP 644
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 67/136 (49%), Gaps = 9/136 (6%)
Query: 158 ALKLFKEMPKRDLV----SYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILT 213
A+ + ++MP LV ++ +++QG G + A+R+ M+ G V+ +I+
Sbjct: 208 AILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVH 267
Query: 214 ACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSM----HE 269
G V++ N+ Q M + G P F +V+ L ++GH+ A E+M M ++
Sbjct: 268 GFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYD 327
Query: 270 PHAGAWGALL-GACKL 284
P + +++ G CKL
Sbjct: 328 PDVYTYNSVISGLCKL 343
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/332 (25%), Positives = 151/332 (45%), Gaps = 39/332 (11%)
Query: 5 NVASWNAMLCGFVKDGDLSSARGVFDAMPEK----NVVSFTTMIDGYAKAGDMAAARFL- 59
NV ++++++ G S A + M EK N+V+F +ID + K G A L
Sbjct: 219 NVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLH 278
Query: 60 ---FEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQL 116
+++ + D+ +++LI+G+ + + ++A ++F M SK+ PD +L+ +
Sbjct: 279 DDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKS 338
Query: 117 GHLELAQWVDSYVSKSSIDLQQDHVI-AALLDMNAKCGNMDRALKLFKEMPKR----DLV 171
+E + + S L D V L+ G+ D A K+FK+M D++
Sbjct: 339 KRVE--DGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIM 396
Query: 172 SYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSM 231
+Y ++ GL +G E A+ +F+ M + D +T ++ +G VD+GW+ F S+
Sbjct: 397 TYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSL 456
Query: 232 KQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHE----PHAGAWGALLGA------ 281
K G+ P+ + M+ L L +AY L+K M E P +G + L+ A
Sbjct: 457 SLK-GVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGD 515
Query: 282 -------------CKLHGDSDLGEIVANQLFE 300
C+ GD+ +VAN L +
Sbjct: 516 KAASAELIREMRSCRFVGDASTIGLVANMLHD 547
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 77/353 (21%), Positives = 135/353 (38%), Gaps = 96/353 (27%)
Query: 5 NVASWNAMLCGFVKDGDLSSARGVFDAMPE----KNVVSFTTMIDG---YAKAGD-MAAA 56
++ + +++L G+ +S A + D M E + ++FTT+I G + KA + +A
Sbjct: 79 SIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALV 138
Query: 57 RFLFEQATEKDVVAWSALISGYVQNG---------------------------------- 82
+ ++ + ++V + +++G + G
Sbjct: 139 DRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKY 198
Query: 83 -QPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHV 141
+ AL +F EME+K ++P+ SL+S G +W D+ S+ D+ + +
Sbjct: 199 RHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYG-----RWSDA--SQLLSDMIEKKI 251
Query: 142 ------IAALLDMNAKCGNMDRALKLFKEMPKR----DLVSYCSMIQGLSIHG------- 184
AL+D K G A KL +M KR D+ +Y S+I G +H
Sbjct: 252 NPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQ 311
Query: 185 ------------------------CG----EDAVRLFNSMLMEGLVPDEVAFTIILTACS 216
C ED LF M GLV D V +T ++
Sbjct: 312 MFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLF 371
Query: 217 HSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHE 269
H G D F+ M G+ P ++ ++D L +G L A E+ M +
Sbjct: 372 HDGDCDNAQKVFKQMVSD-GVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQK 423
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/281 (20%), Positives = 121/281 (43%), Gaps = 24/281 (8%)
Query: 36 NVVSFTTMIDGYAKAGDMAAARFLFEQ----ATEKDVVAWSALISGYVQNGQPNQALKVF 91
N+ ++ +I+ + + ++ A L + E +V S+L++GY + + A+ +
Sbjct: 44 NLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALV 103
Query: 92 LEMESKNVKPDEFILVSLMSATSQLGHL-ELAQWVDSYVSKSSIDLQQDHVIAALLDMNA 150
+M +PD +L+ E VD V + Q +++ + +N
Sbjct: 104 DQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGC----QPNLVTYGVVVNG 159
Query: 151 KC--GNMDRALKLFKEMP----KRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPD 204
C G++D A L +M + D+V + ++I L + +DA+ LF M +G+ P+
Sbjct: 160 LCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPN 219
Query: 205 EVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYEL- 263
V ++ +++ G + M +K I+P+ F ++D + G +A +L
Sbjct: 220 VVTYSSLISCLCSYGRWSDASQLLSDMIEK-KINPNLVTFNALIDAFVKEGKFVEAEKLH 278
Query: 264 ---MKSMHEPHAGAWGALLGACKLHGDSDLGEIVANQLFEL 301
+K +P + +L+ +H D A Q+FE
Sbjct: 279 DDMIKRSIDPDIFTYNSLINGFCMHDRLD----KAKQMFEF 315
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 145/344 (42%), Gaps = 59/344 (17%)
Query: 1 MPQRNV----ASWNAMLCGFVKDGDLSSARGVFDAMPEK----NVVSFTTMIDGYAKAG- 51
M +RN+ ++ ++ G K G L +A +F+ M K N++++ +I G+ AG
Sbjct: 254 MEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGR 313
Query: 52 -DMAAA--RFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVS 108
D A R + ++ +VV +S LI +V+ G+ +A ++ EM + + PD S
Sbjct: 314 WDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTS 373
Query: 109 LMSATSQLGHLELA-QWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPK 167
L+ + HL+ A Q VD VSK L++ K +D L+LF++M
Sbjct: 374 LIDGFCKENHLDKANQMVDLMVSKGCD--PNIRTFNILINGYCKANRIDDGLELFRKMSL 431
Query: 168 R----DLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSG---- 219
R D V+Y ++IQG G A LF M+ + P+ V + I+L +G
Sbjct: 432 RGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEK 491
Query: 220 -------------------------------LVDEGWNYFQSMKQKYGISPSPDHFACMV 248
VD+ W+ F S+ K G+ P + M+
Sbjct: 492 ALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLK-GVKPGVKTYNIMI 550
Query: 249 DLLSRSGHLGDAYELMKSM----HEPHAGAWGALLGACKLHGDS 288
L + G L +A L + M H P + L+ A GD+
Sbjct: 551 GGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDA 594
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 150/324 (46%), Gaps = 33/324 (10%)
Query: 36 NVVSFTTMIDGYAKAGDM----AAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVF 91
N+ + + MI+ + + + +A + + E + + +S LI+G G+ ++AL++
Sbjct: 122 NLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELV 181
Query: 92 LEMESKNVKPDEFILVSLMSATSQLG-HLELAQWVDSYVSKSSIDLQQDHVI-AALLDMN 149
M KPD + +L++ G E +D V Q + V +L++
Sbjct: 182 DRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGC---QPNAVTYGPVLNVM 238
Query: 150 AKCGNMDRALKLFKEMPKR----DLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDE 205
K G A++L ++M +R D V Y +I GL HG ++A LFN M M+G+ +
Sbjct: 239 CKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNI 298
Query: 206 VAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMK 265
+ + I++ ++G D+G + M ++ I+P+ F+ ++D + G L +A EL K
Sbjct: 299 ITYNILIGGFCNAGRWDDGAKLLRDMIKR-KINPNVVTFSVLIDSFVKEGKLREAEELHK 357
Query: 266 SM-HE---PHAGAWGALL-GACKL-HGDSDLGEIVANQLFEL------EPQNAANYILLS 313
M H P + +L+ G CK H D ANQ+ +L +P N + +L
Sbjct: 358 EMIHRGIAPDTITYTSLIDGFCKENHLDK------ANQMVDLMVSKGCDP-NIRTFNILI 410
Query: 314 NIYAAAERWIDVSLVRSRMRERSV 337
N Y A R D + +M R V
Sbjct: 411 NGYCKANRIDDGLELFRKMSLRGV 434
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/331 (23%), Positives = 145/331 (43%), Gaps = 54/331 (16%)
Query: 5 NVASWNAMLCGFVKDGDLSSA----RGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLF 60
+V ++N ++ + ++ R + M N V++ T+I+G++ G + A L
Sbjct: 302 DVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLL 361
Query: 61 EQ----ATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQL 116
+ + V ++ALI G++ G +ALK+F ME+K + P E L+ +
Sbjct: 362 NEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKN 421
Query: 117 GHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKR----DLVS 172
+LA+ + ++ + + + ++D K G +D A+ L EM K D+V+
Sbjct: 422 AEFDLARGFYMRMKRNGVCVGRI-TYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVT 480
Query: 173 YCSMIQGL--------------SIH---------------------GCGEDAVRLFNSML 197
Y ++I G I+ GC ++A+R++ +M+
Sbjct: 481 YSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMI 540
Query: 198 MEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHL 257
+EG D F +++T+ +G V E + + M GI P+ F C+++ SG
Sbjct: 541 LEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSD-GILPNTVSFDCLINGYGNSGEG 599
Query: 258 GDAY----ELMKSMHEPHAGAWGALL-GACK 283
A+ E+ K H P +G+LL G CK
Sbjct: 600 LKAFSVFDEMTKVGHHPTFFTYGSLLKGLCK 630
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/297 (22%), Positives = 139/297 (46%), Gaps = 21/297 (7%)
Query: 5 NVASWNAMLCGFVKDGDLSSARGVFDAMPEKNV----VSFTTMIDGYAKAGDMAAARFLF 60
N ++NA++ G + +G+ A +F M K + VS+ ++DG K + AR +
Sbjct: 372 NHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFY 431
Query: 61 EQATEKDV----VAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQL 116
+ V + ++ +I G +NG ++A+ + EM + PD +L++ ++
Sbjct: 432 MRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKV 491
Query: 117 GHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNA-KCGNMDRALKLFKEM----PKRDLV 171
G + A+ + + + + L + +I + L N + G + A+++++ M RD
Sbjct: 492 GRFKTAKEIVCRIYR--VGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHF 549
Query: 172 SYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSM 231
++ ++ L G +A M +G++P+ V+F ++ +SG + ++ F M
Sbjct: 550 TFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEM 609
Query: 232 KQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGA----WGALLGA-CK 283
K G P+ + ++ L + GHL +A + +KS+H A + LL A CK
Sbjct: 610 -TKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCK 665
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 121/279 (43%), Gaps = 17/279 (6%)
Query: 9 WNAMLCGFVKDGDLSSARGVFDAM----PEKNVVSFTTMIDGYAKAGDMAAA----RFLF 60
++ ++ + G L A +++AM ++ +F ++ KAG +A A R +
Sbjct: 516 YSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMT 575
Query: 61 EQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLE 120
+ V++ LI+GY +G+ +A VF EM P F SL+ + GHL
Sbjct: 576 SDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLR 635
Query: 121 LAQWVDSYVSKSSIDLQQDHVIA-ALLDMNAKCGNMDRALKLFKEMPKRDLV----SYCS 175
A+ S ++ D V+ LL K GN+ +A+ LF EM +R ++ +Y S
Sbjct: 636 EAE--KFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTS 693
Query: 176 MIQGLSIHGCGEDAVRLFNSMLMEG-LVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQK 234
+I GL G A+ G ++P++V +T + +G G YF+
Sbjct: 694 LISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGI-YFREQMDN 752
Query: 235 YGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAG 273
G +P M+D SR G + +L+ M + G
Sbjct: 753 LGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGG 791
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/295 (21%), Positives = 115/295 (38%), Gaps = 47/295 (15%)
Query: 7 ASWNAMLCGFVKDGDLSSARGVFDAMPEKNV----VSFTTMIDGYAKAGDMAAARFLFEQ 62
S+ +L G K+ + ARG + M V +++T MIDG K G + A L +
Sbjct: 409 VSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNE 468
Query: 63 AT----EKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLG- 117
+ + D+V +SALI+G+ + G+ A ++ + + P+ I +L+ ++G
Sbjct: 469 MSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGC 528
Query: 118 -------------------HLELAQWVDSYVSKSSID--------LQQDHVIA------A 144
H V S + + D ++
Sbjct: 529 LKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDC 588
Query: 145 LLDMNAKCGNMDRALKLFKEMPK----RDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEG 200
L++ G +A +F EM K +Y S+++GL G +A + S+
Sbjct: 589 LINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVP 648
Query: 201 LVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSG 255
D V + +LTA SG + + + F M Q+ I P + ++ L R G
Sbjct: 649 AAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQR-SILPDSYTYTSLISGLCRKG 702
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 108/265 (40%), Gaps = 49/265 (18%)
Query: 5 NVASWNAMLCGFVKDGDLSSARGVFDAMPEK----NVVSFTTMIDGYAKAGDMAAARFLF 60
+V + NA+L VK G+ S M ++ +V +F +I+ G + +L
Sbjct: 197 SVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLM 256
Query: 61 EQATEK----DVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQL 116
++ + +V ++ ++ Y + G+ A+++ M+SK V D + + L
Sbjct: 257 QKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDAD-------VCTYNML 309
Query: 117 GHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDL----VS 172
H DL + + IA + L ++M KR + V+
Sbjct: 310 IH----------------DLCRSNRIA-------------KGYLLLRDMRKRMIHPNEVT 340
Query: 173 YCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMK 232
Y ++I G S G A +L N ML GL P+ V F ++ G E F M+
Sbjct: 341 YNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMME 400
Query: 233 QKYGISPSPDHFACMVDLLSRSGHL 257
K G++PS + ++D L ++
Sbjct: 401 AK-GLTPSEVSYGVLLDGLCKNAEF 424
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/277 (20%), Positives = 125/277 (45%), Gaps = 18/277 (6%)
Query: 5 NVASWNAMLCGFVKDGDLSSARGVFDA------MPEKNVVSFTTMIDGYAKAGDMAAARF 58
N+ ++N +L G+ K D+S++ ++ + +P+K ++ +++ G ++ +
Sbjct: 793 NLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDK--LTCHSLVLGICESNMLEIGLK 850
Query: 59 LFE----QATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATS 114
+ + + E D ++ LIS NG+ N A + M S + D+ +++S +
Sbjct: 851 ILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLN 910
Query: 115 QLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDL---- 170
+ + ++ V +SK I + I L++ + G++ A + +EM +
Sbjct: 911 RNHRFQESRMVLHEMSKQGISPESRKYIG-LINGLCRVGDIKTAFVVKEEMIAHKICPPN 969
Query: 171 VSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQS 230
V+ +M++ L+ G ++A L ML LVP +FT ++ C +G V E +
Sbjct: 970 VAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALE-LRV 1028
Query: 231 MKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSM 267
+ G+ + ++ L G + A+EL + M
Sbjct: 1029 VMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEM 1065
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 142/295 (48%), Gaps = 30/295 (10%)
Query: 5 NVASWNAMLCGFVKDGDLSSARGVFDAMPEK----NVVSFTTMIDGYAKAGDMAAARFLF 60
NV ++ A++ ++K +S A +F+ M + N+V+++ +IDG+ KAG + A +F
Sbjct: 552 NVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIF 611
Query: 61 EQ--------------------ATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVK 100
E+ + +VV + AL+ G+ ++ + +A K+ M + +
Sbjct: 612 ERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCE 671
Query: 101 PDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALK 160
P++ + +L+ ++G L+ AQ V + +S+ + ++L+D K D A K
Sbjct: 672 PNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATL-YTYSSLIDRYFKVKRQDLASK 730
Query: 161 LFKEMPKR----DLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACS 216
+ +M + ++V Y MI GL G ++A +L M +G P+ V +T ++
Sbjct: 731 VLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFG 790
Query: 217 HSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPH 271
G ++ + M K G++P+ + ++D ++G L A+ L++ M + H
Sbjct: 791 MIGKIETCLELLERMGSK-GVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTH 844
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 60/287 (20%), Positives = 121/287 (42%), Gaps = 60/287 (20%)
Query: 36 NVVSFTTMIDGYAKAGDMAAARFLFEQATE----KDVVAWSALISGYVQNGQPNQALKVF 91
+V ++T M+D + KAG + AR F + E +VV ++ALI Y++ + + A ++F
Sbjct: 517 DVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELF 576
Query: 92 LEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAK 151
M S+ P+ +L+ + G +E A + + S
Sbjct: 577 ETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSK-----------------D 619
Query: 152 CGNMDRALKLFKEMPKR-DLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTI 210
++D K + + +R ++V+Y +++ G E+A +L ++M MEG P+++ +
Sbjct: 620 VPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDA 679
Query: 211 ILTACSHSGLVDEGW-----------------------NYFQSMKQ-----------KYG 236
++ G +DE YF+ +Q +
Sbjct: 680 LIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENS 739
Query: 237 ISPSPDHFACMVDLLSRSGHLGDAYELMKSMHE----PHAGAWGALL 279
+P+ + M+D L + G +AY+LM+ M E P+ + A++
Sbjct: 740 CAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMI 786
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 102/254 (40%), Gaps = 48/254 (18%)
Query: 17 VKDGDLSSARGVFDAMPEK----NVVSFTTMIDGYAKAGDMAAARFLFEQATEK----DV 68
VK DL+S V M E NVV +T MIDG K G A L + EK +V
Sbjct: 722 VKRQDLASK--VLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNV 779
Query: 69 VAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQ----- 123
V ++A+I G+ G+ L++ M SK V P+ L+ + G L++A
Sbjct: 780 VTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEE 839
Query: 124 -----WVDSYVSKSSI----------------DLQQD------HVIAALLDMNAKCGNMD 156
W + ++ QD V L+D K ++
Sbjct: 840 MKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLE 899
Query: 157 RALKLFKEMPKRDLV------SYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTI 210
AL+L +E+ +Y S+I+ L + E A +LF+ M +G++P+ +F
Sbjct: 900 MALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCS 959
Query: 211 ILTACSHSGLVDEG 224
++ + + E
Sbjct: 960 LIKGLFRNSKISEA 973
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/259 (21%), Positives = 101/259 (38%), Gaps = 13/259 (5%)
Query: 40 FTTMIDGYAKAGDMAAARFLFEQATEKDVVAW----SALISGYVQNGQPNQALKVFLEME 95
+ ++D + D +Q + D + + L+ + +NG + AL+ ++
Sbjct: 168 YNALVDLIVRDDDEKVPEEFLQQIRDDDKEVFGEFLNVLVRKHCRNGSFSIALEELGRLK 227
Query: 96 SKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNM 155
+P L+ A + L+ A + +S +++ + + K G
Sbjct: 228 DFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMD-GFTLRCFAYSLCKVGKW 286
Query: 156 DRALKLFK-EMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTA 214
AL L + E D V Y +I GL E+A+ N M +P+ V ++ +L
Sbjct: 287 REALTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCG 346
Query: 215 CSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSM----HEP 270
C + + M + G PSP F +V SG AY+L+K M H P
Sbjct: 347 CLNKKQLGRCKRVLNMMMME-GCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMP 405
Query: 271 HAGAWGALLGACKLHGDSD 289
+ L+G+ + GD D
Sbjct: 406 GYVVYNILIGS--ICGDKD 422
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 96/349 (27%), Positives = 146/349 (41%), Gaps = 54/349 (15%)
Query: 6 VASWNAMLCGFVKDGDLSSARG---VFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLF-- 60
+ S N +L G D ++R V D P NVV+F T+I+G+ K G+M A LF
Sbjct: 252 IVSCNKVLKGLSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKV 311
Query: 61 --EQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGH 118
++ E D++A+S LI GY + G K+F + K VK D + S + + G
Sbjct: 312 MEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGD 371
Query: 119 LE---------LAQWVDSYVSKSSI---DLQQDHVI----------------------AA 144
L L Q + V +I L QD I ++
Sbjct: 372 LATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSS 431
Query: 145 LLDMNAKCGNMDRALKLFKEMPKR----DLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEG 200
L+D KCGN+ L+++M K D+V Y ++ GLS G A+R ML +
Sbjct: 432 LIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQS 491
Query: 201 LVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDA 260
+ + V F ++ DE F+ M YGI P F ++ + G L +A
Sbjct: 492 IRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGI-YGIKPDVATFTTVMRVSIMEGRLEEA 550
Query: 261 ----YELMKSMHEPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQN 305
+ + K EP A A+ L+ A H +G QLF+L +N
Sbjct: 551 LFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGL----QLFDLMQRN 595
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 93/387 (24%), Positives = 177/387 (45%), Gaps = 56/387 (14%)
Query: 5 NVASWNAMLCGFVKDGDLSSARGVFDAMPE----KNVVSFTTMIDGYAKAGDMA-AARF- 58
++ ++++++ GF K G+L S +++ M + +VV + ++DG +K G M A RF
Sbjct: 425 SIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFS 484
Query: 59 --LFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQL 116
+ Q+ +VV +++LI G+ + + ++ALKVF M +KPD ++M +
Sbjct: 485 VKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIME 544
Query: 117 GHLELAQW--------------------VDSYVS--KSSI-----DLQQDHVIAA----- 144
G LE A + +D++ K +I DL Q + I+A
Sbjct: 545 GRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVC 604
Query: 145 --LLDMNAKCGNMDRALKLFKEMP----KRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLM 198
++ + KC ++ A K F + + D+V+Y +MI G ++A R+F + +
Sbjct: 605 NVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKV 664
Query: 199 EGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLG 258
P+ V TI++ + +D F M +K G P+ + C++D S+S +
Sbjct: 665 TPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEK-GSKPNAVTYGCLMDWFSKSVDIE 723
Query: 259 DAYELMKSMHE----PHAGAWGALL-GACKLHGDSDLGEIVANQLFE--LEPQNAANYIL 311
+++L + M E P ++ ++ G CK G D + +Q + L P A IL
Sbjct: 724 GSFKLFEEMQEKGISPSIVSYSIIIDGLCK-RGRVDEATNIFHQAIDAKLLPDVVAYAIL 782
Query: 312 LSNIYAAAERWIDVSLVRSRMRERSVQ 338
+ Y R ++ +L+ M V+
Sbjct: 783 IRG-YCKVGRLVEAALLYEHMLRNGVK 808
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 143/315 (45%), Gaps = 26/315 (8%)
Query: 5 NVASWNAMLCGFVKDGDLSSARGVFDAM----PEKNVVSFTTMIDGYAKAGDMAAARFLF 60
+V +++ + +VK GDL++A V+ M NVV++T +I G + G + A ++
Sbjct: 355 DVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMY 414
Query: 61 EQ----ATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQL 116
Q E +V +S+LI G+ + G ++ +M PD I L+ S+
Sbjct: 415 GQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQ 474
Query: 117 GHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMP----KRDLVS 172
G + A + SI L V +L+D + D ALK+F+ M K D+ +
Sbjct: 475 GLMLHAMRFSVKMLGQSIRLNV-VVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVAT 533
Query: 173 YCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAF-TIILTACSHSGLVDEGWNYFQSM 231
+ ++++ + G E+A+ LF M GL PD +A+ T+I C H G F M
Sbjct: 534 FTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPT-IGLQLFDLM 592
Query: 232 KQKYGISPSPDHFACMVDLLSRSGHLGDAYE----LMKSMHEPHAGAWGALL-GACKLHG 286
Q+ IS ++ LL + + DA + L++ EP + ++ G C L
Sbjct: 593 -QRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLR- 650
Query: 287 DSDLGEIVANQLFEL 301
L E A ++FEL
Sbjct: 651 --RLDE--AERIFEL 661
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 59/109 (54%), Gaps = 8/109 (7%)
Query: 5 NVASWNAMLCGFVKDGDLSSARGVFDAMPEK----NVVSFTTMIDGYAKAGDMAAARFLF 60
N ++ ++ F K D+ + +F+ M EK ++VS++ +IDG K G + A +F
Sbjct: 705 NAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIF 764
Query: 61 EQATE----KDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFI 105
QA + DVVA++ LI GY + G+ +A ++ M VKPD+ +
Sbjct: 765 HQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLL 813
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 121/240 (50%), Gaps = 15/240 (6%)
Query: 5 NVASWNAMLCGFVKDGDLSSARGVFDAM----PEKNVVSFTTMIDGYA---KAGD-MAAA 56
++ S+ ++ F + LS A V M E ++V+F +++ G+ + GD +
Sbjct: 105 DLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLV 164
Query: 57 RFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQL 116
+ + E +VV ++ LI G +NG+ N AL++ EME K + D +L++
Sbjct: 165 ILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYS 224
Query: 117 GHLELAQWVDSYVSKSSIDLQQDHV-IAALLDMNAKCGNMDRALKLFKEMPKRDL----V 171
G A + + K SI+ D V AL+D+ K GN+D A +L+KEM + + V
Sbjct: 225 GRWSDAARMLRDMMKRSIN--PDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNV 282
Query: 172 SYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSM 231
+Y S+I GL +HG DA + F+ M +G P+ V + +++ +VDEG FQ M
Sbjct: 283 TYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRM 342
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 120/244 (49%), Gaps = 17/244 (6%)
Query: 5 NVASWNAMLCGFVKDGDLSSARGVFDAMPEKNV----VSFTTMIDGYAKAGDMAAARFLF 60
+V ++ A++ FVK G+L A+ ++ M + +V V++ ++I+G G + A+ F
Sbjct: 245 DVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTF 304
Query: 61 EQATEK----DVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQL 116
+ K +VV ++ LISG+ + ++ +K+F M + D F +L+ Q+
Sbjct: 305 DLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQV 364
Query: 117 GHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKC--GNMDRALKLFKEMPKRD----L 170
G L +A +D + S + D + +L ++ C G ++ AL F +M + + +
Sbjct: 365 GKLRVA--LDIFCWMVSRRVTPDIITHCIL-LHGLCVNGEIESALVKFDDMRESEKYIGI 421
Query: 171 VSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQS 230
V+Y MI GL E A LF + +EG+ PD +TI++ +G E +
Sbjct: 422 VAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRR 481
Query: 231 MKQK 234
MK++
Sbjct: 482 MKEE 485
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 99/212 (46%), Gaps = 17/212 (8%)
Query: 5 NVASWNAMLCGFVKDGDLSSARGVFDAMPEK----NVVSFTTMIDGYAKAGDMAAARFLF 60
N ++N+++ G G L A+ FD M K NVV++ T+I G+ K + LF
Sbjct: 280 NNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLF 339
Query: 61 EQAT----EKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQL 116
++ + D+ ++ LI GY Q G+ AL +F M S+ V PD L+
Sbjct: 340 QRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVN 399
Query: 117 GHLE--LAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMP----KRDL 170
G +E L ++ D S+ I + +++ L K +++A +LF +P K D
Sbjct: 400 GEIESALVKFDDMRESEKYIGIVAYNIMIHGL---CKADKVEKAWELFCRLPVEGVKPDA 456
Query: 171 VSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLV 202
+Y MI GL +G +A L M EG++
Sbjct: 457 RTYTIMILGLCKNGPRREADELIRRMKEEGII 488
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 123/289 (42%), Gaps = 21/289 (7%)
Query: 15 GFVKDGDLSSARGVFDAM----PEKNVVSFTTMIDGYAKAGDMAAARFLFEQATE----- 65
GF+ A +F M P ++V FT ++ A + F Q E
Sbjct: 45 GFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIY-FSQKMELYGIS 103
Query: 66 KDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWV 125
D+ +++ LI + + + + AL V +M +P SL+ + + A +
Sbjct: 104 HDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSL 163
Query: 126 DSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKR----DLVSYCSMIQGLS 181
+ KS + V L+D K G ++ AL+L EM K+ D+V+Y +++ GL
Sbjct: 164 VILMVKSGYE-PNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLC 222
Query: 182 IHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSP 241
G DA R+ M+ + PD V FT ++ G +DE ++ M Q + P+
Sbjct: 223 YSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQS-SVDPNN 281
Query: 242 DHFACMVDLLSRSGHLGDA---YELMKSMH-EPHAGAWGALL-GACKLH 285
+ +++ L G L DA ++LM S P+ + L+ G CK
Sbjct: 282 VTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFR 330
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 86/360 (23%), Positives = 169/360 (46%), Gaps = 31/360 (8%)
Query: 5 NVASWNAMLCGFVKDGDLSSARGVFDAMPE----KNVVSFTTMIDGYAKAGDMA-AARF- 58
++ ++++++ GF K G+L S +++ M + +VV + ++DG +K G M A RF
Sbjct: 425 SIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFS 484
Query: 59 --LFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQL 116
+ Q+ +VV +++LI G+ + + ++ALKVF M +KPD ++M + +
Sbjct: 485 VKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVS--I 542
Query: 117 GHLELAQWVDSYVSKSSIDLQQDHVIAA-------LLDMNAKCGNMDRALKLFKEMP--- 166
+ + + DL Q + I+A ++ + KC ++ A K F +
Sbjct: 543 MEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGK 602
Query: 167 -KRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGW 225
+ D+V+Y +MI G ++A R+F + + P+ V TI++ + +D
Sbjct: 603 MEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAI 662
Query: 226 NYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHE----PHAGAWGALL-G 280
F M +K G P+ + C++D S+S + +++L + M E P ++ ++ G
Sbjct: 663 RMFSIMAEK-GSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDG 721
Query: 281 ACKLHGDSDLGEIVANQLFE--LEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQ 338
CK G D + +Q + L P A IL+ Y R ++ +L+ M V+
Sbjct: 722 LCK-RGRVDEATNIFHQAIDAKLLPDVVAYAILIRG-YCKVGRLVEAALLYEHMLRNGVK 779
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 90/340 (26%), Positives = 139/340 (40%), Gaps = 52/340 (15%)
Query: 6 VASWNAMLCGFVKDGDLSSARG---VFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLF-- 60
+ S N +L G D ++R V D P NVV+F T+I+G+ K G+M A LF
Sbjct: 252 IVSCNKVLKGLSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKV 311
Query: 61 --EQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGH 118
++ E D++A+S LI GY + G K+F + K VK D + S + + G
Sbjct: 312 MEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGD 371
Query: 119 LE---------LAQWVDSYVSKSSI---DLQQDHVI----------------------AA 144
L L Q + V +I L QD I ++
Sbjct: 372 LATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSS 431
Query: 145 LLDMNAKCGNMDRALKLFKEMPKR----DLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEG 200
L+D KCGN+ L+++M K D+V Y ++ GLS G A+R ML +
Sbjct: 432 LIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQS 491
Query: 201 LVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDA 260
+ + V F ++ DE F+ M YGI P F ++ R + DA
Sbjct: 492 IRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGI-YGIKPDVATFTTVM----RVSIMEDA 546
Query: 261 YELMKSMHEPHAGAWGALLGACKLHGDSDLGEIVANQLFE 300
+ K M L+ K+ D + +V + LF+
Sbjct: 547 F--CKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFK 584
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 59/109 (54%), Gaps = 8/109 (7%)
Query: 5 NVASWNAMLCGFVKDGDLSSARGVFDAMPEK----NVVSFTTMIDGYAKAGDMAAARFLF 60
N ++ ++ F K D+ + +F+ M EK ++VS++ +IDG K G + A +F
Sbjct: 676 NAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIF 735
Query: 61 EQATE----KDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFI 105
QA + DVVA++ LI GY + G+ +A ++ M VKPD+ +
Sbjct: 736 HQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLL 784
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 93/200 (46%), Gaps = 14/200 (7%)
Query: 59 LFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGH 118
L E E D+V ++ +I GY + ++A ++F ++ P+ L L+ +
Sbjct: 598 LIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNND 657
Query: 119 LELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKR----DLVSYC 174
++ A + S +++ L+D +K +++ + KLF+EM ++ +VSY
Sbjct: 658 MDGAIRMFSIMAEKG-SKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYS 716
Query: 175 SMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQK 234
+I GL G ++A +F+ + L+PD VA+ I++ G + E ++ M +
Sbjct: 717 IIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRN 776
Query: 235 YGISPSPDHFACMVDLLSRS 254
G+ P DLL R+
Sbjct: 777 -GVKPD--------DLLQRA 787
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 123/241 (51%), Gaps = 13/241 (5%)
Query: 5 NVASWNAMLCGFVKDGDLSSARGVFDAMPEKNV----VSFTTMIDGYAKAGDMAAARFLF 60
+V ++ +M+ G+ K G + A + D M + V+F ++DGYAKAG+M A +
Sbjct: 276 DVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIR 335
Query: 61 EQATE----KDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQL 116
+ DVV +++LI GY + GQ +Q +++ EM ++ + P+ F L++A
Sbjct: 336 GKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNE 395
Query: 117 GHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKR----DLVS 172
L A+ + ++ I + Q + ++D K G ++ A + +EM K+ D ++
Sbjct: 396 NRLLKARELLGQLASKDI-IPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKIT 454
Query: 173 YCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMK 232
+ +I G + G +AV +F+ M+ G PD++ + +L+ +G+ E ++ Q +
Sbjct: 455 FTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHLNQIAR 514
Query: 233 Q 233
+
Sbjct: 515 K 515
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 120/273 (43%), Gaps = 15/273 (5%)
Query: 10 NAMLCGFVKDGDLSSARGVFDAMPE----KNVVSFTTMIDGYAKAGDMAAARFLFEQAT- 64
N++L VK + A +FD + +F +I G G A L +
Sbjct: 175 NSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSG 234
Query: 65 ---EKDVVAWSALISGYVQNGQPNQALKVFLEMESKNV-KPDEFILVSLMSATSQLGHLE 120
E D+V ++ LI G+ ++ + N+A ++F +++S +V PD S++S + G +
Sbjct: 235 FGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMR 294
Query: 121 LAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPK----RDLVSYCSM 176
A + + + I + L+D AK G M A ++ +M D+V++ S+
Sbjct: 295 EASSLLDDMLRLGI-YPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSL 353
Query: 177 IQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYG 236
I G G RL+ M G+ P+ ++I++ A + + + + K
Sbjct: 354 IDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASK-D 412
Query: 237 ISPSPDHFACMVDLLSRSGHLGDAYELMKSMHE 269
I P P + ++D ++G + +A +++ M +
Sbjct: 413 IIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEK 445
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 123/241 (51%), Gaps = 13/241 (5%)
Query: 5 NVASWNAMLCGFVKDGDLSSARGVFDAMPEKNV----VSFTTMIDGYAKAGDMAAARFLF 60
+V ++ +M+ G+ K G + A + D M + V+F ++DGYAKAG+M A +
Sbjct: 276 DVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIR 335
Query: 61 EQATE----KDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQL 116
+ DVV +++LI GY + GQ +Q +++ EM ++ + P+ F L++A
Sbjct: 336 GKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNE 395
Query: 117 GHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKR----DLVS 172
L A+ + ++ I + Q + ++D K G ++ A + +EM K+ D ++
Sbjct: 396 NRLLKARELLGQLASKDI-IPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKIT 454
Query: 173 YCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMK 232
+ +I G + G +AV +F+ M+ G PD++ + +L+ +G+ E ++ Q +
Sbjct: 455 FTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHLNQIAR 514
Query: 233 Q 233
+
Sbjct: 515 K 515
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 120/273 (43%), Gaps = 15/273 (5%)
Query: 10 NAMLCGFVKDGDLSSARGVFDAMPE----KNVVSFTTMIDGYAKAGDMAAARFLFEQAT- 64
N++L VK + A +FD + +F +I G G A L +
Sbjct: 175 NSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSG 234
Query: 65 ---EKDVVAWSALISGYVQNGQPNQALKVFLEMESKNV-KPDEFILVSLMSATSQLGHLE 120
E D+V ++ LI G+ ++ + N+A ++F +++S +V PD S++S + G +
Sbjct: 235 FGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMR 294
Query: 121 LAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPK----RDLVSYCSM 176
A + + + I + L+D AK G M A ++ +M D+V++ S+
Sbjct: 295 EASSLLDDMLRLGI-YPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSL 353
Query: 177 IQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYG 236
I G G RL+ M G+ P+ ++I++ A + + + + K
Sbjct: 354 IDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASK-D 412
Query: 237 ISPSPDHFACMVDLLSRSGHLGDAYELMKSMHE 269
I P P + ++D ++G + +A +++ M +
Sbjct: 413 IIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEK 445
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 92/381 (24%), Positives = 164/381 (43%), Gaps = 68/381 (17%)
Query: 1 MPQRNV----ASWNAMLCGFVKDGDLSSARGVFDAMPEK----NVVSFTTMIDGYAKAG- 51
M +RN+ ++ ++ G KDG L +A +F+ M K +++++ T+I G+ AG
Sbjct: 254 MEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGR 313
Query: 52 -DMAAA--RFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVS 108
D A R + ++ +VV +S LI +V+ G+ +A ++ EM + + P+ S
Sbjct: 314 WDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNS 373
Query: 109 LMSATSQLGHLELA-QWVDSYVSKS-SIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMP 166
L+ + LE A Q VD +SK D+ ++ L++ K +D L+LF+EM
Sbjct: 374 LIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNI---LINGYCKANRIDDGLELFREMS 430
Query: 167 KR----DLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSG--- 219
R + V+Y +++QG G E A +LF M+ + PD V++ I+L +G
Sbjct: 431 LRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELE 490
Query: 220 --------------------------------LVDEGWNYFQSMKQKYGISPSPDHFACM 247
VD+ W+ F S+ K G+ + M
Sbjct: 491 KALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLK-GVKLDARAYNIM 549
Query: 248 VDLLSRSGHLGDAYELMKSM----HEPHAGAWGALLGACKLHGDSDLGEIVANQLFELE- 302
+ L R L A L + M H P + L+ A H D A + E++
Sbjct: 550 ISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRA---HLGDDDATTAAELIEEMKS 606
Query: 303 ---PQNAANYILLSNIYAAAE 320
P + + ++ N+ ++ E
Sbjct: 607 SGFPADVSTVKMVINMLSSGE 627
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 134/300 (44%), Gaps = 29/300 (9%)
Query: 5 NVASWNAMLCGFVKDGDLSSARGVFDAMPEK----NVVSFTTMIDGYAKAGDMAAARFLF 60
+ + N ++ G +G +S A + D M E N V++ +++ K+G A A L
Sbjct: 192 TLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELL 251
Query: 61 EQATEK----DVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQL 116
+ E+ D V +S +I G ++G + A +F EME K K D +L+
Sbjct: 252 RKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNA 311
Query: 117 GHLE-----LAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDL- 170
G + L + +S + + + L+D K G + A +L KEM +R +
Sbjct: 312 GRWDDGAKLLRDMIKRKISPNVV------TFSVLIDSFVKEGKLREADQLLKEMMQRGIA 365
Query: 171 ---VSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNY 227
++Y S+I G E+A+++ + M+ +G PD + F I++ + +D+G
Sbjct: 366 PNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLEL 425
Query: 228 FQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSM----HEPHAGAWGALL-GAC 282
F+ M + G+ + + +V +SG L A +L + M P ++ LL G C
Sbjct: 426 FREMSLR-GVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLC 484
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 123/264 (46%), Gaps = 17/264 (6%)
Query: 34 EKNVVSFTTMIDGYAKAGDMAAARFLFEQATE----KDVVAWSALISGYVQNGQPNQALK 89
E + V F T+++G ++ A L ++ E ++ + L++G NG+ + A+
Sbjct: 155 EPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVV 214
Query: 90 VFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHV-IAALLDM 148
+ M +P+E +++ + G LA + + + +I L D V + ++D
Sbjct: 215 LIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKL--DAVKYSIIIDG 272
Query: 149 NAKCGNMDRALKLFKEMP----KRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPD 204
K G++D A LF EM K D+++Y ++I G G +D +L M+ + P+
Sbjct: 273 LCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPN 332
Query: 205 EVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELM 264
V F++++ + G + E + M Q+ GI+P+ + ++D + L +A +++
Sbjct: 333 VVTFSVLIDSFVKEGKLREADQLLKEMMQR-GIAPNTITYNSLIDGFCKENRLEEAIQMV 391
Query: 265 KSM----HEPHAGAWGALL-GACK 283
M +P + L+ G CK
Sbjct: 392 DLMISKGCDPDIMTFNILINGYCK 415
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/301 (22%), Positives = 133/301 (44%), Gaps = 23/301 (7%)
Query: 2 PQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEK----NVVSFTTMIDGYAKAGDMAAAR 57
P V +N + K + M K ++ + + MI+ + + ++ A
Sbjct: 84 PLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAF 143
Query: 58 F----LFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSAT 113
+ + E D V ++ L++G + ++AL++ M KP L +L++
Sbjct: 144 STMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGL 203
Query: 114 SQLGHL-ELAQWVDSYVSKSSIDLQQDHVI-AALLDMNAKCGNMDRALKLFKEMPKR--- 168
G + + +D V Q + V +L++ K G A++L ++M +R
Sbjct: 204 CLNGKVSDAVVLIDRMVETG---FQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIK 260
Query: 169 -DLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNY 227
D V Y +I GL G ++A LFN M ++G D + + ++ ++G D+G
Sbjct: 261 LDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKL 320
Query: 228 FQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHE----PHAGAWGALL-GAC 282
+ M ++ ISP+ F+ ++D + G L +A +L+K M + P+ + +L+ G C
Sbjct: 321 LRDMIKR-KISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFC 379
Query: 283 K 283
K
Sbjct: 380 K 380
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 127/275 (46%), Gaps = 18/275 (6%)
Query: 7 ASWNAMLCGFVKDGDLSSARGVFDAMPEKNVV----SFTTMIDGYAKAGDMAAARFLFEQ 62
S+N ++ G +GDL A D M ++ +V ++ T+I G + AA L +
Sbjct: 328 VSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIRE 387
Query: 63 ATEK----DVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGH 118
EK D V ++ LI+GY Q+G +A + EM + ++P +F SL+ +
Sbjct: 388 IREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNK 447
Query: 119 L-ELAQWVDSYVSKSSIDLQQDHVIA-ALLDMNAKCGNMDRALKLFKEMP----KRDLVS 172
E + + V K ++ D V+ L+D + GNMDRA L KEM D V+
Sbjct: 448 TREADELFEKVVGKG---MKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVT 504
Query: 173 YCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMK 232
Y +++GL G E+A L M G+ PD +++ +++ S G + M
Sbjct: 505 YNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEM- 563
Query: 233 QKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSM 267
G +P+ + ++ LS++ A EL++ M
Sbjct: 564 LSLGFNPTLLTYNALLKGLSKNQEGELAEELLREM 598
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 124/280 (44%), Gaps = 23/280 (8%)
Query: 3 QRNVASWNAMLCGFVKDGDLSSARGVFDAMP----EKNVVSFTTMIDGYAKAGDMAAARF 58
+ NV ++N M+ K+G L A+G M + +V++ T++ G++ G + AR
Sbjct: 222 KSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARL 281
Query: 59 LFEQATEK----DVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATS 114
+ + K D+ ++ ++S G+ ++ L+ EM+ + PD L+ S
Sbjct: 282 IISEMKSKGFQPDMQTYNPILSWMCNEGRASEVLR---EMKEIGLVPDSVSYNILIRGCS 338
Query: 115 QLGHLELA-QWVDSYVSKSSID--LQQDHVIAALLDMNAKCGNMDRALKLFKEMPKR--- 168
G LE+A + D V + + + +I L N ++ A L +E+ ++
Sbjct: 339 NNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMEN----KIEAAEILIREIREKGIV 394
Query: 169 -DLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNY 227
D V+Y +I G HG + A L + M+ +G+ P + +T ++ E
Sbjct: 395 LDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADEL 454
Query: 228 FQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSM 267
F+ + K G+ P ++D G++ A+ L+K M
Sbjct: 455 FEKVVGK-GMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEM 493
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 104/224 (46%), Gaps = 15/224 (6%)
Query: 7 ASWNAMLCGFVKDGDLSSARGVFDAMPEKNV----VSFTTMIDGYAKAGDMAAARFLFEQ 62
++N ++ G+ + GD A + D M + ++T++I + A LFE+
Sbjct: 398 VTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEK 457
Query: 63 ATEK----DVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGH 118
K D+V + L+ G+ G ++A + EM+ ++ PD+ LM G
Sbjct: 458 VVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGK 517
Query: 119 LELAQWVDSYVSKSSIDLQQDHV-IAALLDMNAKCGNMDRALKLFKEMP----KRDLVSY 173
E A+ + + + I + DH+ L+ +K G+ A + EM L++Y
Sbjct: 518 FEEARELMGEMKRRGI--KPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTY 575
Query: 174 CSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSH 217
++++GLS + GE A L M EG+VP++ +F ++ A S+
Sbjct: 576 NALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEAMSN 619
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/332 (22%), Positives = 156/332 (46%), Gaps = 23/332 (6%)
Query: 5 NVASWNAMLCGFVKDGDLSSARGVFDAMPEKNV----VSFTTMIDGYAKAGDMAAARFLF 60
V++ NA++ F K G + V+ M E + ++ +++G A + +A +F
Sbjct: 186 TVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVF 245
Query: 61 E----QATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQL 116
E + D+V ++ +I GY + GQ +A++ +ME++ + D+ ++++ A
Sbjct: 246 EVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQAC--Y 303
Query: 117 GHLELAQWVDSYVSKSSIDLQ-QDHVIAALLDMNAKCGNMDRALKLFKEMPKR----DLV 171
+ V Y +Q H + ++ K G ++ +F+ M ++ ++
Sbjct: 304 ADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVA 363
Query: 172 SYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSM 231
Y +I G + G EDA+RL + M+ EG PD V +++++ +G V+E +YF +
Sbjct: 364 IYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTC 423
Query: 232 KQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEP----HAGAWGALLGACKLHGD 287
+ G++ + ++ ++D L ++G + +A L + M E + + AL+ A H
Sbjct: 424 RFD-GLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRK 482
Query: 288 SDLGEIVANQLFELEPQNAANY---ILLSNIY 316
D + ++ E E + Y ILLS ++
Sbjct: 483 VDEAIALFKRMEEEEGCDQTVYTYTILLSGMF 514
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 125/261 (47%), Gaps = 15/261 (5%)
Query: 36 NVVSFTTMIDGYAKAGDMAAARFLFEQATEKDV----VAWSALISGYVQNGQPNQALKVF 91
N+ +F ++DG K G + A+ +F+ T + + V ++ LISG Q G + A K+F
Sbjct: 197 NLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLF 256
Query: 92 LEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAK 151
EM++ PD +L+ +LG + A + K L ++L+D +
Sbjct: 257 YEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGY-SSLIDGLFR 315
Query: 152 CGNMDRALKLFKEMPKR----DLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVA 207
+A +L+ M K+ D++ Y +IQGLS G EDA++L +SM +G+ PD
Sbjct: 316 ARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYC 375
Query: 208 FTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELM--- 264
+ ++ A GL++EG + M + + H ++ + R+G + +A E+
Sbjct: 376 YNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTH-TILICSMCRNGLVREAEEIFTEI 434
Query: 265 -KSMHEPHAGAWGALL-GACK 283
KS P + AL+ G CK
Sbjct: 435 EKSGCSPSVATFNALIDGLCK 455
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 91/208 (43%), Gaps = 11/208 (5%)
Query: 67 DVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEF---ILVSLMSATSQLGHLELAQ 123
D + LIS Y + G +A++ F M+ + +PD F +++ +M L A
Sbjct: 126 DSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMREEVFFMLAFAV 185
Query: 124 WVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDL----VSYCSMIQG 179
+ + S +L + L+D K G A K+F +M R + V+Y +I G
Sbjct: 186 YNEMLKCNCSPNL---YTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISG 242
Query: 180 LSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISP 239
L G +DA +LF M G PD VA +L G + E + + + +K G
Sbjct: 243 LCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLR-LFEKDGFVL 301
Query: 240 SPDHFACMVDLLSRSGHLGDAYELMKSM 267
++ ++D L R+ A+EL +M
Sbjct: 302 GLRGYSSLIDGLFRARRYTQAFELYANM 329
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 105/251 (41%), Gaps = 16/251 (6%)
Query: 5 NVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKA----GDMAAARFLF 60
++ + ++ G K G + A + +MP K + T + KA G + R L
Sbjct: 337 DIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQ 396
Query: 61 EQATEK----DVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQL 116
+ +E D + LI +NG +A ++F E+E P +L+ +
Sbjct: 397 LEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKS 456
Query: 117 GHLELAQWVDSYVS---KSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKR----D 169
G L+ A+ + + +S+ L+ H D + G++ +A + D
Sbjct: 457 GELKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPD 516
Query: 170 LVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQ 229
+VSY +I G G + A++L N + ++GL PD V + ++ G +E + F
Sbjct: 517 IVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLFY 576
Query: 230 SMKQKYGISPS 240
+ K + SP+
Sbjct: 577 A-KDDFRHSPA 586
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 125/250 (50%), Gaps = 16/250 (6%)
Query: 5 NVASWNAMLCGFVKDGDLSSARGVFDAMPEK----NVVSFTTMIDGYAKAGDMAAARFLF 60
NV ++NA++ FVK+G L A ++D M ++ ++ +++++I+G+ + A+ +F
Sbjct: 329 NVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF 388
Query: 61 EQATEKD----VVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQL 116
E KD VV ++ LI+G+ + + ++ +++F EM + + + +L+ Q
Sbjct: 389 ELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQA 448
Query: 117 GHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRD----LVS 172
+ AQ V + + LLD K G +++A+ +F+ + + + +
Sbjct: 449 RDCDNAQMVFKQMVSDGVH-PNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYT 507
Query: 173 YCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMK 232
Y MI+G+ G ED LF S+ ++G+ PD + + +++ GL +E F+ M+
Sbjct: 508 YNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMR 567
Query: 233 QKYGISPSPD 242
+ P PD
Sbjct: 568 ED---GPLPD 574
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 136/302 (45%), Gaps = 31/302 (10%)
Query: 5 NVASWNAMLCGFVKDGDLSSARGVFDAMPEK----NVVSFTTMIDGYAKAGDMAAARFLF 60
+ ++ ++ G S A + D M ++ N+V++ +++G K GD+ A L
Sbjct: 189 DTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLL 248
Query: 61 EQ----ATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQL 116
+ E +VV +S +I + + AL +F EME+K V+P+ SL+S
Sbjct: 249 NKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCN- 307
Query: 117 GHLELAQWVDSYVSKSSIDLQQDHV------IAALLDMNAKCGNMDRALKLFKEMPKR-- 168
+W D+ S+ D+ + + AL+D K G + A KL+ EM KR
Sbjct: 308 ----YERWSDA--SRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSI 361
Query: 169 --DLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWN 226
D+ +Y S+I G +H ++A +F M+ + P+ V + ++ + +DEG
Sbjct: 362 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVE 421
Query: 227 YFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSM----HEPHAGAWGALL-GA 281
F+ M Q+ G+ + + ++ ++ +A + K M P+ + LL G
Sbjct: 422 LFREMSQR-GLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGL 480
Query: 282 CK 283
CK
Sbjct: 481 CK 482
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 140/282 (49%), Gaps = 24/282 (8%)
Query: 3 QRNVASWNAMLCGFVKDGDLSSARGVFDAMPEK----NVVSFTTMID---GYAKAGDMAA 55
+ NV ++ ++ K A +F M K NV++++++I Y + D A
Sbjct: 257 EANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSD--A 314
Query: 56 ARFL---FEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSA 112
+R L E+ +VV ++ALI +V+ G+ +A K++ EM +++ PD F SL++
Sbjct: 315 SRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLING 374
Query: 113 TSQLGHLELAQWV-DSYVSKSSIDLQQDHVIA--ALLDMNAKCGNMDRALKLFKEMPKRD 169
L+ A+ + + +SK +V+ L++ K +D ++LF+EM +R
Sbjct: 375 FCMHDRLDEAKHMFELMISKDCF----PNVVTYNTLINGFCKAKRIDEGVELFREMSQRG 430
Query: 170 L----VSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGW 225
L V+Y ++I G ++A +F M+ +G+ P+ + + +L +G +++
Sbjct: 431 LVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAM 490
Query: 226 NYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSM 267
F+ + Q+ + P+ + M++ + ++G + D ++L S+
Sbjct: 491 VVFEYL-QRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSL 531
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 64/307 (20%), Positives = 133/307 (43%), Gaps = 31/307 (10%)
Query: 36 NVVSFTTMIDGYAKAGDMAAARFLFEQ----ATEKDVVAWSALISGYVQNGQPNQALKVF 91
N+ ++ +I+ + + ++ A L + E +V S+L++GY + + A+ +
Sbjct: 119 NLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALV 178
Query: 92 LEMESKNVKPDEFILVSLMSATSQLGHL-ELAQWVDSYVSKSSIDLQQDHVIAALLDMNA 150
+M +PD +L+ E VD V + Q +++ + +N
Sbjct: 179 DQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGC----QPNLVTYGVVVNG 234
Query: 151 KC--GNMDRALKLFKEMP----KRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPD 204
C G++D A L +M + ++V Y ++I L + +DA+ LF M +G+ P+
Sbjct: 235 LCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPN 294
Query: 205 EVAFTIILTA-CSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAY-- 261
+ ++ +++ C++ D +++K I+P+ F ++D + G L +A
Sbjct: 295 VITYSSLISCLCNYERWSDASRLLSDMIERK--INPNVVTFNALIDAFVKEGKLVEAEKL 352
Query: 262 --ELMKSMHEPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQ-----NAANYILLSN 314
E++K +P + +L+ +H D A +FEL N Y L N
Sbjct: 353 YDEMIKRSIDPDIFTYSSLINGFCMHDRLD----EAKHMFELMISKDCFPNVVTYNTLIN 408
Query: 315 IYAAAER 321
+ A+R
Sbjct: 409 GFCKAKR 415