Miyakogusa Predicted Gene
- Lj1g3v4724820.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v4724820.1 Non Chatacterized Hit- tr|K4BU71|K4BU71_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,32.8,3e-19,seg,NULL; PPR,Pentatricopeptide repeat;
PPR_2,Pentatricopeptide repeat; SUBFAMILY NOT NAMED,NULL;
FA,CUFF.33037.1
(207 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 174 4e-44
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 145 2e-35
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 138 2e-33
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 135 3e-32
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 133 8e-32
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 132 2e-31
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 129 2e-30
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 128 2e-30
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 125 3e-29
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 124 5e-29
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 123 8e-29
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 2e-28
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 121 3e-28
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 121 3e-28
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 120 4e-28
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 120 5e-28
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 7e-28
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 119 2e-27
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 119 2e-27
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 117 4e-27
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 5e-27
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 116 1e-26
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 1e-26
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 1e-26
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 2e-26
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 115 2e-26
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 115 2e-26
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 2e-26
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 114 4e-26
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 5e-26
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 5e-26
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 113 7e-26
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 113 7e-26
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 112 2e-25
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 3e-25
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 111 3e-25
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 111 3e-25
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 3e-25
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 111 4e-25
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 6e-25
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 110 6e-25
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 109 2e-24
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 109 2e-24
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 2e-24
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 3e-24
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 3e-24
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 3e-24
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 5e-24
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 6e-24
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 107 7e-24
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 107 8e-24
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 106 9e-24
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 106 1e-23
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 106 1e-23
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 106 1e-23
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 106 1e-23
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 106 1e-23
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 106 1e-23
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 105 2e-23
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 2e-23
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 105 3e-23
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 105 3e-23
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 104 3e-23
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 104 4e-23
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 104 5e-23
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 104 5e-23
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 104 5e-23
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 6e-23
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 6e-23
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 6e-23
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 9e-23
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 1e-22
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 1e-22
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 1e-22
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 102 2e-22
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 102 2e-22
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 2e-22
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 2e-22
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 2e-22
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 2e-22
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 2e-22
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 3e-22
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 101 3e-22
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 4e-22
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 4e-22
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 4e-22
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 5e-22
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 6e-22
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 7e-22
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 100 8e-22
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 8e-22
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 100 1e-21
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 2e-21
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 99 2e-21
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 2e-21
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 2e-21
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 2e-21
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 98 4e-21
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 98 4e-21
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 5e-21
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 6e-21
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 97 7e-21
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 8e-21
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 9e-21
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 97 9e-21
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 1e-20
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 96 1e-20
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 2e-20
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 2e-20
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 2e-20
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 96 2e-20
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 2e-20
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 96 2e-20
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 2e-20
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 3e-20
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 3e-20
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 4e-20
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 5e-20
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 5e-20
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 5e-20
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 94 9e-20
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 1e-19
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 93 1e-19
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 93 1e-19
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 1e-19
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 1e-19
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 2e-19
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 2e-19
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 2e-19
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 2e-19
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 2e-19
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 2e-19
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 3e-19
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 92 3e-19
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 3e-19
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 4e-19
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 6e-19
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 6e-19
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 7e-19
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 8e-19
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 8e-19
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 9e-19
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 1e-18
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 1e-18
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 2e-18
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 89 2e-18
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 2e-18
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 2e-18
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 2e-18
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 3e-18
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 3e-18
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 3e-18
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 3e-18
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 4e-18
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 4e-18
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 5e-18
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 5e-18
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 87 6e-18
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 6e-18
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 87 7e-18
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 1e-17
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 87 1e-17
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 1e-17
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 1e-17
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 1e-17
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 2e-17
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 2e-17
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 3e-17
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 3e-17
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 85 4e-17
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 5e-17
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 84 9e-17
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 1e-16
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 2e-16
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 2e-16
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 2e-16
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 2e-16
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 4e-16
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 5e-16
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 6e-16
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 6e-16
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 7e-16
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 80 8e-16
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 9e-16
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 9e-16
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 2e-15
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 3e-15
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 4e-15
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 4e-15
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 5e-15
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 5e-15
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 6e-15
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 6e-15
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 76 2e-14
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 3e-14
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 4e-14
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 4e-14
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 74 7e-14
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 71 4e-13
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 6e-13
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 71 6e-13
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 71 6e-13
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 6e-12
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 8e-12
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 65 4e-11
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 4e-11
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 63 1e-10
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 2e-10
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 3e-10
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 4e-10
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 4e-10
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 4e-10
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 6e-10
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 60 7e-10
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 8e-10
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 1e-09
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 1e-09
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 1e-09
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 1e-09
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 2e-09
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 3e-09
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 58 4e-09
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 58 4e-09
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 5e-09
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 57 6e-09
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 6e-09
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 57 6e-09
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 1e-08
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 1e-08
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 1e-08
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 1e-08
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 2e-08
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 3e-08
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 3e-08
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 3e-08
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 55 4e-08
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 4e-08
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 5e-08
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 5e-08
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 5e-08
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 6e-08
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 54 7e-08
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 54 8e-08
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 1e-07
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 1e-07
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 1e-07
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 1e-07
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 1e-07
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 53 2e-07
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 53 2e-07
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 52 2e-07
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 2e-07
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 2e-07
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 52 3e-07
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 3e-07
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 3e-07
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 3e-07
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 3e-07
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 52 4e-07
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 4e-07
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 4e-07
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 51 4e-07
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 4e-07
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 5e-07
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 5e-07
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 5e-07
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 51 6e-07
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 51 6e-07
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 51 7e-07
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 50 8e-07
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 9e-07
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 9e-07
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 1e-06
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 1e-06
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 1e-06
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 2e-06
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 49 2e-06
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 3e-06
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 3e-06
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 3e-06
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 3e-06
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 3e-06
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 48 4e-06
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 48 5e-06
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 48 6e-06
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 47 9e-06
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 174 bits (440), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 100/189 (52%), Positives = 123/189 (65%), Gaps = 2/189 (1%)
Query: 19 TLLKACKRTEHLQQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTT-VFSRVLSPTT 77
TL K CK HL QIHA II++GLEQDQ LIS FIS + S S+ ++ VF RV SP T
Sbjct: 15 TLFKLCKSEIHLNQIHARIIRKGLEQDQNLISIFISSSSSSSSSLSYSSSVFERVPSPGT 74
Query: 78 FLWNTLIKSHCQNSYFPATLSAFARMKANG-SVPDTYTYPLVIKACSAMCRGLEGKSVHG 136
+LWN LIK + F T+S RM G + PD YT+PLV+K CS + G SVHG
Sbjct: 75 YLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNGQVRVGSSVHG 134
Query: 137 SALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVE 196
LR G ++DV VGTS +D YGKC ++ ARKVF M RN VSWTA+VV YV +G++ E
Sbjct: 135 LVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVVAYVKSGELEE 194
Query: 197 AKKLFDGMP 205
AK +FD MP
Sbjct: 195 AKSMFDLMP 203
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 59/126 (46%), Gaps = 1/126 (0%)
Query: 80 WNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAM-CRGLEGKSVHGSA 138
W+ LI + QN F+ M A PD + ++ ACS M C L K
Sbjct: 272 WSALILGYAQNGQPNEAFKVFSEMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLH 331
Query: 139 LRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAK 198
R +V +LIDM KCG + A K+F+ M R++VS+ +M+ G G EA
Sbjct: 332 QRMNKFSSHYVVPALIDMNAKCGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAI 391
Query: 199 KLFDGM 204
+LF+ M
Sbjct: 392 RLFEKM 397
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 84/191 (43%), Gaps = 17/191 (8%)
Query: 20 LLKACKRTEHLQ---QIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPT 76
++K C ++ +H +++ G ++D + ++F+ + + VF +
Sbjct: 116 VMKVCSNNGQVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERN 175
Query: 77 TFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGL--EGKSV 134
W L+ ++ ++ S F M + + +A+ GL G V
Sbjct: 176 AVSWTALVVAYVKSGELEEAKSMFDLMPERN-----------LGSWNALVDGLVKSGDLV 224
Query: 135 HGSALRCGL-EEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGD 193
+ L + + D+ TS+ID Y K G++ AR +F+ G +V +W+A+++GY G
Sbjct: 225 NAKKLFDEMPKRDIISYTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQ 284
Query: 194 VVEAKKLFDGM 204
EA K+F M
Sbjct: 285 PNEAFKVFSEM 295
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 145 bits (366), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 74/187 (39%), Positives = 107/187 (57%), Gaps = 1/187 (0%)
Query: 20 LLKACKRTEHLQQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFL 79
L+ C L+QIH II+ L DQ L+ IS++ S Y++ VF+++ SP+TF
Sbjct: 26 FLRTCSNFSQLKQIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSPSTFT 85
Query: 80 WNTLIKSHCQNSYFPATLSAFARMK-ANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSA 138
WN +I+S N L F M ++ S D +T+P VIKAC A G VHG A
Sbjct: 86 WNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQVHGLA 145
Query: 139 LRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAK 198
++ G DVF +L+D+Y KCG+ RKVFD+M GR++VSWT M+ G V+ + A+
Sbjct: 146 IKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAE 205
Query: 199 KLFDGMP 205
+F+ MP
Sbjct: 206 IVFNQMP 212
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 75/144 (52%)
Query: 58 SLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPL 117
S S + + VF+++ W +I ++ +N F RM+ + P+ +T
Sbjct: 197 SNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVN 256
Query: 118 VIKACSAMCRGLEGKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRN 177
+++A + + G+ VH A + G D F+GT+LIDMY KCG + DARKVFD M G++
Sbjct: 257 LLQASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKS 316
Query: 178 VVSWTAMVVGYVAAGDVVEAKKLF 201
+ +W +M+ G EA LF
Sbjct: 317 LATWNSMITSLGVHGCGEEALSLF 340
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 138 bits (348), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 69/190 (36%), Positives = 112/190 (58%), Gaps = 3/190 (1%)
Query: 19 TLLKACKRTEHLQQIHACIIQRGLEQDQFLISNFIS---LAHSLSTIAYSTTVFSRVLSP 75
+LL CK + L+ IHA +I+ GL + +S I L+ + Y+ +VF + P
Sbjct: 38 SLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEP 97
Query: 76 TTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVH 135
+WNT+ + H +S + L + M + G +P++YT+P V+K+C+ EG+ +H
Sbjct: 98 NLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIH 157
Query: 136 GSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVV 195
G L+ G + D++V TSLI MY + G + DA KVFD+ R+VVS+TA++ GY + G +
Sbjct: 158 GHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIE 217
Query: 196 EAKKLFDGMP 205
A+KLFD +P
Sbjct: 218 NAQKLFDEIP 227
Score = 77.4 bits (189), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 90/192 (46%), Gaps = 7/192 (3%)
Query: 19 TLLKACKRTEHLQ---QIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSP 75
T++ AC ++ ++ Q+H I G + +++ I L + + +F R+
Sbjct: 271 TVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYK 330
Query: 76 TTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVH 135
WNTLI + + + L F M +G P+ T ++ AC+ + G+ +H
Sbjct: 331 DVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIH 390
Query: 136 ---GSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAG 192
L+ G+ + TSLIDMY KCG+I A +VF+ + +++ SW AM+ G+ G
Sbjct: 391 VYIDKRLK-GVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHG 449
Query: 193 DVVEAKKLFDGM 204
+ LF M
Sbjct: 450 RADASFDLFSRM 461
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 93/219 (42%), Gaps = 34/219 (15%)
Query: 20 LLKACKRTEHL---QQIHACIIQRGLEQDQFLISNFISL---------AHSL-------S 60
+LK+C +++ QQIH +++ G + D ++ ++ IS+ AH +
Sbjct: 140 VLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRD 199
Query: 61 TIAYSTTV---------------FSRVLSPTTFLWNTLIKSHCQNSYFPATLSAFARMKA 105
++Y+ + F + WN +I + + + L F M
Sbjct: 200 VVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMK 259
Query: 106 NGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGD 165
PD T V+ AC+ G+ VH G ++ + +LID+Y KCGE+
Sbjct: 260 TNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELET 319
Query: 166 ARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
A +F+R+ ++V+SW ++ GY EA LF M
Sbjct: 320 ACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEM 358
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 135 bits (339), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 69/187 (36%), Positives = 104/187 (55%), Gaps = 2/187 (1%)
Query: 21 LKACKRTEHLQQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLW 80
L C ++Q+HA II+R L +D + IS + VF++V P L
Sbjct: 26 LPKCANLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHLC 85
Query: 81 NTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALR 140
N+LI++H QNS F+ M+ G D +TYP ++KACS K +H +
Sbjct: 86 NSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEK 145
Query: 141 CGLEEDVFVGTSLIDMYGKCGEIG--DARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAK 198
GL D++V +LID Y +CG +G DA K+F++MS R+ VSW +M+ G V AG++ +A+
Sbjct: 146 LGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDAR 205
Query: 199 KLFDGMP 205
+LFD MP
Sbjct: 206 RLFDEMP 212
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 55/125 (44%)
Query: 80 WNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSAL 139
W +I + + +M A+G D ++ AC+ G +H
Sbjct: 283 WTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILK 342
Query: 140 RCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKK 199
R L + +V +L+DMY KCG + A VF+ + +++VSW M+ G G EA +
Sbjct: 343 RSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIE 402
Query: 200 LFDGM 204
LF M
Sbjct: 403 LFSRM 407
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 84/191 (43%), Gaps = 5/191 (2%)
Query: 19 TLLKACKRTEHLQ---QIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSP 75
++L AC + L +IH+ + + L + ++++ + + + + VF+ +
Sbjct: 320 SILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKK 379
Query: 76 TTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVH 135
WNT++ + + + F+RM+ G PD T+ V+ +C+ EG
Sbjct: 380 DLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYF 439
Query: 136 GSALRC-GLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGR-NVVSWTAMVVGYVAAGD 193
S + L V L+D+ G+ G + +A KV M NVV W A++ +
Sbjct: 440 YSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGACRMHNE 499
Query: 194 VVEAKKLFDGM 204
V AK++ D +
Sbjct: 500 VDIAKEVLDNL 510
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 133 bits (334), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 66/189 (34%), Positives = 105/189 (55%), Gaps = 2/189 (1%)
Query: 18 ATLLKACKRTEHLQQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTT 77
A+L+ + L+QIHA ++ GL+ FLI+ I + S I ++ VF + P
Sbjct: 25 ASLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQI 84
Query: 78 FLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGS 137
F WN +I+ + +N++F L ++ M+ PD++T+P ++KACS + G+ VH
Sbjct: 85 FPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQ 144
Query: 138 ALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFD--RMSGRNVVSWTAMVVGYVAAGDVV 195
R G + DVFV LI +Y KC +G AR VF+ + R +VSWTA+V Y G+ +
Sbjct: 145 VFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPM 204
Query: 196 EAKKLFDGM 204
EA ++F M
Sbjct: 205 EALEIFSQM 213
Score = 113 bits (282), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 93/177 (52%)
Query: 31 QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQN 90
+ IHA +++ GLE + L+ + ++ +A + +F ++ SP LWN +I + +N
Sbjct: 242 RSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKN 301
Query: 91 SYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVG 150
Y + F M PDT + I AC+ + + +S++ R +DVF+
Sbjct: 302 GYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFIS 361
Query: 151 TSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGMPPG 207
++LIDM+ KCG + AR VFDR R+VV W+AM+VGY G EA L+ M G
Sbjct: 362 SALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERG 418
Score = 100 bits (250), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 95/190 (50%), Gaps = 5/190 (2%)
Query: 20 LLKACKRTEHLQQ---IHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSP- 75
LLKAC HLQ +HA + + G + D F+ + I+L + + TVF + P
Sbjct: 125 LLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPE 184
Query: 76 -TTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSV 134
T W ++ ++ QN L F++M+ PD V+ A + + +G+S+
Sbjct: 185 RTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSI 244
Query: 135 HGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDV 194
H S ++ GLE + + SL MY KCG++ A+ +FD+M N++ W AM+ GY G
Sbjct: 245 HASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYA 304
Query: 195 VEAKKLFDGM 204
EA +F M
Sbjct: 305 REAIDMFHEM 314
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 132 bits (331), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 66/184 (35%), Positives = 106/184 (57%), Gaps = 3/184 (1%)
Query: 24 CKRTEHLQQIHACIIQRGLEQDQFLISNFISLAHS---LSTIAYSTTVFSRVLSPTTFLW 80
K +QQ HA +++ GL D F S ++ A + T++Y+ ++ +R+ SP F
Sbjct: 49 AKSLTEIQQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILNRIGSPNGFTH 108
Query: 81 NTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALR 140
N++I+++ +S L+ F M PD Y++ V+KAC+A C EG+ +HG ++
Sbjct: 109 NSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIHGLFIK 168
Query: 141 CGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKL 200
GL DVFV +L+++YG+ G ARKV DRM R+ VSW +++ Y+ G V EA+ L
Sbjct: 169 SGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARAL 228
Query: 201 FDGM 204
FD M
Sbjct: 229 FDEM 232
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 83/167 (49%), Gaps = 5/167 (2%)
Query: 39 QRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQNSYFPATLS 98
+R +E F+IS + + + + VF + WN ++ ++ + L
Sbjct: 234 ERNVESWNFMISGYAAAG----LVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLE 289
Query: 99 AFARMKANGSV-PDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVGTSLIDMY 157
F +M + + PD +T V+ AC+++ +G+ VH + G+E + F+ T+L+DMY
Sbjct: 290 VFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMY 349
Query: 158 GKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
KCG+I A +VF S R+V +W +++ G +A ++F M
Sbjct: 350 SKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEM 396
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 129 bits (324), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 65/183 (35%), Positives = 101/183 (55%), Gaps = 3/183 (1%)
Query: 21 LKACKRTEHLQQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSP--TTF 78
L + L++IHA +I GL+ F I A S +VF RV SP +
Sbjct: 14 LSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRV-SPAKNVY 72
Query: 79 LWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSA 138
LWN++I++ +N FP L + +++ + PD YT+P VIKAC+ + G V+
Sbjct: 73 LWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQI 132
Query: 139 LRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAK 198
L G E D+FVG +L+DMY + G + AR+VFD M R++VSW +++ GY + G EA
Sbjct: 133 LDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEAL 192
Query: 199 KLF 201
+++
Sbjct: 193 EIY 195
Score = 94.7 bits (234), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 92/172 (53%)
Query: 33 IHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQNSY 92
+H+ I+ G+ D + + I + + S +FS + + T WNT+I + +
Sbjct: 430 LHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGD 489
Query: 93 FPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVGTS 152
F L +M+ + VPD T+ + + C+++ GK +H LR G E ++ +G +
Sbjct: 490 FATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNA 549
Query: 153 LIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
LI+MY KCG + ++ +VF+RMS R+VV+WT M+ Y G+ +A + F M
Sbjct: 550 LIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADM 601
Score = 82.0 bits (201), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 91/186 (48%), Gaps = 3/186 (1%)
Query: 19 TLLKACK---RTEHLQQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSP 75
+++KAC E ++ I+ G E D F+ + + + + + + VF +
Sbjct: 111 SVIKACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVR 170
Query: 76 TTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVH 135
WN+LI + + Y+ L + +K + VPD++T V+ A + +G+ +H
Sbjct: 171 DLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLH 230
Query: 136 GSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVV 195
G AL+ G+ V V L+ MY K DAR+VFD M R+ VS+ M+ GY+ V
Sbjct: 231 GFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVE 290
Query: 196 EAKKLF 201
E+ ++F
Sbjct: 291 ESVRMF 296
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 85/179 (47%), Gaps = 3/179 (1%)
Query: 18 ATLLKACKRTEHL---QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLS 74
+++L+AC L + I+ +++ G + + + I + + + VF+ +
Sbjct: 311 SSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMEC 370
Query: 75 PTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSV 134
T WN++I + Q+ + F M D TY ++I + + GK +
Sbjct: 371 KDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGL 430
Query: 135 HGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGD 193
H + ++ G+ D+ V +LIDMY KCGE+GD+ K+F M + V+W ++ V GD
Sbjct: 431 HSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGD 489
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 70/137 (51%), Gaps = 1/137 (0%)
Query: 68 VFSRVLSPTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCR 127
VF + + +NT+I + + ++ F + PD T V++AC +
Sbjct: 264 VFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLE-NLDQFKPDLLTVSSVLRACGHLRD 322
Query: 128 GLEGKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVG 187
K ++ L+ G + V LID+Y KCG++ AR VF+ M ++ VSW +++ G
Sbjct: 323 LSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISG 382
Query: 188 YVAAGDVVEAKKLFDGM 204
Y+ +GD++EA KLF M
Sbjct: 383 YIQSGDLMEAMKLFKMM 399
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 128 bits (322), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 72/187 (38%), Positives = 104/187 (55%), Gaps = 7/187 (3%)
Query: 20 LLKACKRTEHLQQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFL 79
LLK C L+QI A ++ +E+ FLI + L YS+ +FS P +
Sbjct: 43 LLKKCISVNQLRQIQAQMLLHSVEKPNFLIPKAVELG----DFNYSSFLFSVTEEPNHYS 98
Query: 80 WNTLIK--SHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGS 137
+N +I+ ++ N + A LS + RMK +G PD +TY V AC+ + G+SVH S
Sbjct: 99 FNYMIRGLTNTWNDH-EAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVHSS 157
Query: 138 ALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEA 197
+ GLE DV + SLI MY KCG++G ARK+FD ++ R+ VSW +M+ GY AG +A
Sbjct: 158 LFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKDA 217
Query: 198 KKLFDGM 204
LF M
Sbjct: 218 MDLFRKM 224
Score = 104 bits (259), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 94/182 (51%), Gaps = 3/182 (1%)
Query: 23 ACKRTEHL---QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFL 79
AC + E + + +H+ + + GLE+D + + I + + Y+ +F + T
Sbjct: 141 ACAKLEEIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVS 200
Query: 80 WNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSAL 139
WN++I + + Y + F +M+ G PD T ++ ACS + G+ + A+
Sbjct: 201 WNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAI 260
Query: 140 RCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKK 199
+ F+G+ LI MYGKCG++ AR+VF++M ++ V+WTAM+ Y G EA K
Sbjct: 261 TKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFK 320
Query: 200 LF 201
LF
Sbjct: 321 LF 322
Score = 97.8 bits (242), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 91/195 (46%), Gaps = 9/195 (4%)
Query: 19 TLLKACK-----RTEHLQQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVL 73
++L AC RT L + A + GL FL S IS+ + + VF++++
Sbjct: 238 SMLGACSHLGDLRTGRLLEEMAITKKIGL--STFLGSKLISMYGKCGDLDSARRVFNQMI 295
Query: 74 SPTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKS 133
W +I + QN F M+ G PD T V+ AC ++ GK
Sbjct: 296 KKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQ 355
Query: 134 VHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGD 193
+ A L+ +++V T L+DMYGKCG + +A +VF+ M +N +W AM+ Y G
Sbjct: 356 IETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAYAHQGH 415
Query: 194 VVEAKKLFDGM--PP 206
EA LFD M PP
Sbjct: 416 AKEALLLFDRMSVPP 430
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 125 bits (313), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 65/186 (34%), Positives = 93/186 (50%)
Query: 19 TLLKACKRTEHLQQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTF 78
TL+ HL+QIH +I L D FL++ + YS +FS P F
Sbjct: 18 TLISVACTVNHLKQIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIF 77
Query: 79 LWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSA 138
L+N+LI N F TL F ++ +G +T+PLV+KAC+ G +H
Sbjct: 78 LYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLV 137
Query: 139 LRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAK 198
++CG DV TSL+ +Y G + DA K+FD + R+VV+WTA+ GY +G EA
Sbjct: 138 VKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAI 197
Query: 199 KLFDGM 204
LF M
Sbjct: 198 DLFKKM 203
Score = 79.3 bits (194), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 89/188 (47%), Gaps = 3/188 (1%)
Query: 20 LLKACKRTEHLQ---QIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPT 76
+LKAC R + +H+ +++ G D +++ +S+ + + +F + +
Sbjct: 117 VLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRS 176
Query: 77 TFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHG 136
W L + + + F +M G PD+Y V+ AC + G+ +
Sbjct: 177 VVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVK 236
Query: 137 SALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVE 196
++++ FV T+L+++Y KCG++ AR VFD M +++V+W+ M+ GY + E
Sbjct: 237 YMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKE 296
Query: 197 AKKLFDGM 204
+LF M
Sbjct: 297 GIELFLQM 304
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/153 (21%), Positives = 71/153 (46%)
Query: 42 LEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQNSYFPATLSAFA 101
++++ F+ + ++L + + +VF ++ W+T+I+ + NS+ + F
Sbjct: 243 MQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFL 302
Query: 102 RMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVGTSLIDMYGKCG 161
+M PD ++ + +C+++ G+ R ++F+ +LIDMY KCG
Sbjct: 303 QMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCG 362
Query: 162 EIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDV 194
+ +VF M +++V A + G G V
Sbjct: 363 AMARGFEVFKEMKEKDIVIMNAAISGLAKNGHV 395
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 124 bits (310), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 106/186 (56%), Gaps = 1/186 (0%)
Query: 20 LLKACKRTEHLQQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFL 79
L+ K ++I+A II GL Q F+++ + + + Y+T +F++V +P FL
Sbjct: 16 FLQRVKSRNEWKKINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPNVFL 75
Query: 80 WNTLIKSHCQNSYFPATLSAFARM-KANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSA 138
+N++I+++ NS + + + ++ + + +PD +T+P + K+C+++ GK VHG
Sbjct: 76 YNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHL 135
Query: 139 LRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAK 198
+ G V +LIDMY K ++ DA KVFD M R+V+SW +++ GY G + +AK
Sbjct: 136 CKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAK 195
Query: 199 KLFDGM 204
LF M
Sbjct: 196 GLFHLM 201
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 78/162 (48%)
Query: 43 EQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQNSYFPATLSAFAR 102
E+D ++ +S L + + +F +L T W +I + + + F
Sbjct: 172 ERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFRE 231
Query: 103 MKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVGTSLIDMYGKCGE 162
M+ G PD + V+ +C+ + GK +H A R G + V +LI+MY KCG
Sbjct: 232 MQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGV 291
Query: 163 IGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
I A ++F +M G++V+SW+ M+ GY G+ A + F+ M
Sbjct: 292 ISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEM 333
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 123 bits (309), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 67/190 (35%), Positives = 99/190 (52%), Gaps = 5/190 (2%)
Query: 20 LLKACKRTEHL---QQIHACIIQRG--LEQDQFLISNFISLAHSLSTIAYSTTVFSRVLS 74
+L+ C L +QIHA I++ G +++++ + + + + +FS++
Sbjct: 76 ILQGCVYERDLSTGKQIHARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRV 135
Query: 75 PTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSV 134
F W +I C+ L F M N PD + P V KAC A+ G+ V
Sbjct: 136 RNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGV 195
Query: 135 HGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDV 194
HG ++ GLE+ VFV +SL DMYGKCG + DA KVFD + RN V+W A++VGYV G
Sbjct: 196 HGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKN 255
Query: 195 VEAKKLFDGM 204
EA +LF M
Sbjct: 256 EEAIRLFSDM 265
Score = 90.5 bits (223), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 85/186 (45%), Gaps = 5/186 (2%)
Query: 27 TEHLQQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKS 86
E +Q HA I G+E D L ++ ++ + I Y+ VF R+ WN +I
Sbjct: 290 VEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISG 349
Query: 87 HCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEED 146
+ Q + M+ D T ++ A + GK V +R E D
Sbjct: 350 YVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESD 409
Query: 147 VFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLF----- 201
+ + ++++DMY KCG I DA+KVFD ++++ W ++ Y +G EA +LF
Sbjct: 410 IVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQL 469
Query: 202 DGMPPG 207
+G+PP
Sbjct: 470 EGVPPN 475
Score = 90.1 bits (222), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 86/179 (48%), Gaps = 3/179 (1%)
Query: 22 KAC---KRTEHLQQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTF 78
KAC K + + +H +++ GLE F+ S+ + + ++ VF +
Sbjct: 181 KACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAV 240
Query: 79 LWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSA 138
WN L+ + QN + F+ M+ G P T + A + M EGK H A
Sbjct: 241 AWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIA 300
Query: 139 LRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEA 197
+ G+E D +GTSL++ Y K G I A VFDRM ++VV+W ++ GYV G V +A
Sbjct: 301 IVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDA 359
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 63/129 (48%), Gaps = 3/129 (2%)
Query: 75 PTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSV 134
P W T++ QN + +M+ +G P+ ++ + + AC+ + G+++
Sbjct: 509 PNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTI 568
Query: 135 HGSALRCGLEED--VFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAG 192
HG +R L+ V + TSL+DMY KCG+I A KVF + AM+ Y G
Sbjct: 569 HGYIIR-NLQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLSNAMISAYALYG 627
Query: 193 DVVEAKKLF 201
++ EA L+
Sbjct: 628 NLKEAIALY 636
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 76/187 (40%), Gaps = 42/187 (22%)
Query: 18 ATLLKACKRTEHLQ---QIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLS 74
ATL+ A RTE+L+ ++ I+ E D L S + + +I + VF +
Sbjct: 379 ATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVE 438
Query: 75 PTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSV 134
LWNTL+ ++ ++ L F M+ G P+ T+ L+I
Sbjct: 439 KDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLII--------------- 483
Query: 135 HGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGR----NVVSWTAMVVGYVA 190
SL+ + G++ +A+ +F +M N++SWT M+ G V
Sbjct: 484 ----------------LSLL----RNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQ 523
Query: 191 AGDVVEA 197
G EA
Sbjct: 524 NGCSEEA 530
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 122 bits (305), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 65/189 (34%), Positives = 102/189 (53%), Gaps = 4/189 (2%)
Query: 20 LLKACKRTEHLQQIHACIIQRGLEQDQFLISNFI--SLAHS--LSTIAYSTTVFSRVLSP 75
LLK C + +Q+HA I+ L ++ + AHS +++ Y+ ++F + P
Sbjct: 36 LLKRCHNIDEFKQVHARFIKLSLFYSSSFSASSVLAKCAHSGWENSMNYAASIFRGIDDP 95
Query: 76 TTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVH 135
TF +NT+I+ + F L + M G+ PD +TYP ++KAC+ + EGK +H
Sbjct: 96 CTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIREGKQIH 155
Query: 136 GSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVV 195
G + GLE DVFV SLI+MYG+CGE+ + VF+++ + SW++MV G
Sbjct: 156 GQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWS 215
Query: 196 EAKKLFDGM 204
E LF GM
Sbjct: 216 ECLLLFRGM 224
Score = 84.3 bits (207), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 97/190 (51%), Gaps = 6/190 (3%)
Query: 20 LLKACKRTEHL---QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPT 76
LLKAC R + + +QIH + + GLE D F+ ++ I++ + S+ VF ++ S T
Sbjct: 138 LLKACTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKT 197
Query: 77 TFLWNTLIKSHCQNSYFPATLSAFARM--KANGSVPDTYTYPLVIKACSAMCRGLEGKSV 134
W++++ + + L F M + N ++ ++ AC+ G S+
Sbjct: 198 AASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALL-ACANTGALNLGMSI 256
Query: 135 HGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDV 194
HG LR E ++ V TSL+DMY KCG + A +F +M RN ++++AM+ G G+
Sbjct: 257 HGFLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEG 316
Query: 195 VEAKKLFDGM 204
A ++F M
Sbjct: 317 ESALRMFSKM 326
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 121 bits (304), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 101/185 (54%), Gaps = 4/185 (2%)
Query: 21 LKACKRTEHLQQIHACIIQRGLEQDQFLISNFISLAHSLST---IAYSTTVFSRVLS-PT 76
LK CK + L+ H + ++GL+ D I+ ++ + L T ++++ VF S T
Sbjct: 39 LKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGT 98
Query: 77 TFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHG 136
F++N+LI+ + + + F RM +G PD YT+P + AC+ G +HG
Sbjct: 99 CFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHG 158
Query: 137 SALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVE 196
++ G +D+FV SL+ Y +CGE+ ARKVFD MS RNVVSWT+M+ GY +
Sbjct: 159 LIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKD 218
Query: 197 AKKLF 201
A LF
Sbjct: 219 AVDLF 223
Score = 100 bits (248), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 94/189 (49%), Gaps = 3/189 (1%)
Query: 20 LLKACKRTEHLQ---QIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPT 76
++ AC + E L+ +++A I G+E + ++S + + + I + +F +
Sbjct: 242 VISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASN 301
Query: 77 TFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHG 136
L N + ++ + L F M +G PD + I +CS + L GKS HG
Sbjct: 302 LDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHG 361
Query: 137 SALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVE 196
LR G E + +LIDMY KC A ++FDRMS + VV+W ++V GYV G+V
Sbjct: 362 YVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDA 421
Query: 197 AKKLFDGMP 205
A + F+ MP
Sbjct: 422 AWETFETMP 430
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 80/174 (45%), Gaps = 1/174 (0%)
Query: 32 QIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQNS 91
QIH I++ G +D F+ ++ + + + VF + W ++I + +
Sbjct: 155 QIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRD 214
Query: 92 YFPATLSAFARMKANGSV-PDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVG 150
+ + F RM + V P++ T VI AC+ + G+ V+ G+E + +
Sbjct: 215 FAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMV 274
Query: 151 TSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
++L+DMY KC I A+++FD N+ AM YV G EA +F+ M
Sbjct: 275 SALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLM 328
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 65/126 (51%), Gaps = 1/126 (0%)
Query: 80 WNTLIKSHCQNSYFPATLSAFARMKANGSV-PDTYTYPLVIKACSAMCRGLEGKSVHGSA 138
WNT+I Q S F + F M++ V D T + AC + K ++
Sbjct: 437 WNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYI 496
Query: 139 LRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAK 198
+ G++ DV +GT+L+DM+ +CG+ A +F+ ++ R+V +WTA + AG+ A
Sbjct: 497 EKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAI 556
Query: 199 KLFDGM 204
+LFD M
Sbjct: 557 ELFDDM 562
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 121 bits (304), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 101/185 (54%), Gaps = 4/185 (2%)
Query: 21 LKACKRTEHLQQIHACIIQRGLEQDQFLISNFISLAHSLST---IAYSTTVFSRVLS-PT 76
LK CK + L+ H + ++GL+ D I+ ++ + L T ++++ VF S T
Sbjct: 39 LKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGT 98
Query: 77 TFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHG 136
F++N+LI+ + + + F RM +G PD YT+P + AC+ G +HG
Sbjct: 99 CFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHG 158
Query: 137 SALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVE 196
++ G +D+FV SL+ Y +CGE+ ARKVFD MS RNVVSWT+M+ GY +
Sbjct: 159 LIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKD 218
Query: 197 AKKLF 201
A LF
Sbjct: 219 AVDLF 223
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 94/189 (49%), Gaps = 3/189 (1%)
Query: 20 LLKACKRTEHLQ---QIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPT 76
++ AC + E L+ +++A I G+E + ++S + + + I + +F +
Sbjct: 242 VISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASN 301
Query: 77 TFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHG 136
L N + ++ + L F M +G PD + I +CS + L GKS HG
Sbjct: 302 LDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHG 361
Query: 137 SALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVE 196
LR G E + +LIDMY KC A ++FDRMS + VV+W ++V GYV G+V
Sbjct: 362 YVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDA 421
Query: 197 AKKLFDGMP 205
A + F+ MP
Sbjct: 422 AWETFETMP 430
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 80/174 (45%), Gaps = 1/174 (0%)
Query: 32 QIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQNS 91
QIH I++ G +D F+ ++ + + + VF + W ++I + +
Sbjct: 155 QIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRD 214
Query: 92 YFPATLSAFARMKANGSV-PDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVG 150
+ + F RM + V P++ T VI AC+ + G+ V+ G+E + +
Sbjct: 215 FAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMV 274
Query: 151 TSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
++L+DMY KC I A+++FD N+ AM YV G EA +F+ M
Sbjct: 275 SALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLM 328
Score = 63.9 bits (154), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 65/126 (51%), Gaps = 1/126 (0%)
Query: 80 WNTLIKSHCQNSYFPATLSAFARMKANGSV-PDTYTYPLVIKACSAMCRGLEGKSVHGSA 138
WNT+I Q S F + F M++ V D T + AC + K ++
Sbjct: 437 WNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYI 496
Query: 139 LRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAK 198
+ G++ DV +GT+L+DM+ +CG+ A +F+ ++ R+V +WTA + AG+ A
Sbjct: 497 EKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAI 556
Query: 199 KLFDGM 204
+LFD M
Sbjct: 557 ELFDDM 562
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 120 bits (302), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 66/185 (35%), Positives = 100/185 (54%)
Query: 20 LLKACKRTEHLQQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFL 79
LL L +IHA +++ L L+++FIS+ SLS Y+ VFS + +P +
Sbjct: 10 LLHGHNTRTRLPEIHAHLLRHFLHGSNLLLAHFISICGSLSNSDYANRVFSHIQNPNVLV 69
Query: 80 WNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSAL 139
+N +IK + +LS F+ MK+ G D YTY ++K+CS++ GK VHG +
Sbjct: 70 FNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLRFGKCVHGELI 129
Query: 140 RCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKK 199
R G + ++++Y G +GDA+KVFD MS RNVV W M+ G+ +GDV
Sbjct: 130 RTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLH 189
Query: 200 LFDGM 204
LF M
Sbjct: 190 LFKQM 194
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 65/138 (47%), Gaps = 1/138 (0%)
Query: 68 VFSRVLSPTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCR 127
+F ++ + WN++I S + L F M G PD T V+ +++
Sbjct: 190 LFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPISASLGV 249
Query: 128 GLEGKSVHGSALRCGLEED-VFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVV 186
GK +H +A GL +D + VG +L+D Y K G++ A +F +M RNVVSW ++
Sbjct: 250 LDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQRRNVVSWNTLIS 309
Query: 187 GYVAAGDVVEAKKLFDGM 204
G G LFD M
Sbjct: 310 GSAVNGKGEFGIDLFDAM 327
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 120 bits (302), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 60/174 (34%), Positives = 97/174 (55%)
Query: 31 QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQN 90
++IH +I++G++ D ++ S+ + + + I S VFSR+ WN+L+ + QN
Sbjct: 262 KEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQN 321
Query: 91 SYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVG 150
+ L F +M P + VI AC+ + GK +HG LR G ++F+
Sbjct: 322 GRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIA 381
Query: 151 TSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
++L+DMY KCG I ARK+FDRM+ + VSWTA+++G+ G EA LF+ M
Sbjct: 382 SALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEM 435
Score = 93.6 bits (231), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 70/125 (56%)
Query: 80 WNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSAL 139
+NT+I + Q+ + L M PD++T V+ S ++GK +HG +
Sbjct: 210 YNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVI 269
Query: 140 RCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKK 199
R G++ DV++G+SL+DMY K I D+ +VF R+ R+ +SW ++V GYV G EA +
Sbjct: 270 RKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALR 329
Query: 200 LFDGM 204
LF M
Sbjct: 330 LFRQM 334
Score = 80.1 bits (196), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 101/225 (44%), Gaps = 40/225 (17%)
Query: 19 TLLKACKRTE---HLQQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSP 75
TL+K R + +Q+HA I R S IS+ +L + + +F + SP
Sbjct: 10 TLIKNPTRIKSKSQAKQLHAQFI-RTQSLSHTSASIVISIYTNLKLLHEALLLFKTLKSP 68
Query: 76 TTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVH 135
W ++I+ S F L++F M+A+G PD +P V+K+C+ M G+SVH
Sbjct: 69 PVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVH 128
Query: 136 GSALRCGLEEDVFVGTSLIDMYGK---------CGEIGD--------------------- 165
G +R G++ D++ G +L++MY K G + D
Sbjct: 129 GFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIM 188
Query: 166 ------ARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
R+VF+ M ++VVS+ ++ GY +G +A ++ M
Sbjct: 189 PFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREM 233
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/160 (21%), Positives = 71/160 (44%), Gaps = 4/160 (2%)
Query: 18 ATLLKACKR--TEHL-QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLS 74
++++ AC T HL +Q+H +++ G + F+ S + + I + +F R+
Sbjct: 347 SSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNV 406
Query: 75 PTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSV 134
W +I H + + +S F MK G P+ + V+ ACS + E
Sbjct: 407 LDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGY 466
Query: 135 HGSALRC-GLEEDVFVGTSLIDMYGKCGEIGDARKVFDRM 173
S + GL +++ ++ D+ G+ G++ +A +M
Sbjct: 467 FNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKM 506
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 120 bits (301), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 66/193 (34%), Positives = 103/193 (53%), Gaps = 7/193 (3%)
Query: 20 LLKACKRTEHLQQIHACIIQRGLEQDQFLISNFISLAHSLST-------IAYSTTVFSRV 72
LL++C L+ IH +++ L D F+ S ++L ST + Y+ +FS++
Sbjct: 18 LLQSCSSFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFSQI 77
Query: 73 LSPTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGK 132
+P F++N LI+ + + +M + PD T+P +IKA S M L G+
Sbjct: 78 QNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLVGE 137
Query: 133 SVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAG 192
H +R G + DV+V SL+ MY CG I A ++F +M R+VVSWT+MV GY G
Sbjct: 138 QTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCG 197
Query: 193 DVVEAKKLFDGMP 205
V A+++FD MP
Sbjct: 198 MVENAREMFDEMP 210
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 98/219 (44%), Gaps = 34/219 (15%)
Query: 20 LLKACKRTEHL---QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSR----- 71
L+KA E + +Q H+ I++ G + D ++ ++ + + + IA + +F +
Sbjct: 123 LIKASSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRD 182
Query: 72 VLSPTT--------------------------FLWNTLIKSHCQNSYFPATLSAFARMKA 105
V+S T+ F W+ +I + +N+ F + F MK
Sbjct: 183 VVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKR 242
Query: 106 NGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGD 165
G V + VI +C+ + G+ + ++ + ++ +GT+L+DM+ +CG+I
Sbjct: 243 EGVVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEK 302
Query: 166 ARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
A VF+ + + +SW++++ G G +A F M
Sbjct: 303 AIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQM 341
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 119 bits (297), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/196 (38%), Positives = 106/196 (54%), Gaps = 15/196 (7%)
Query: 18 ATLLKACKRTEHL---QQIHACIIQRGLEQDQFLISNFISL--AHSLSTIAYSTTVFSRV 72
A+LL C QQ+HA I GLE D L+ ++ A +L A + T S +
Sbjct: 87 ASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEI 146
Query: 73 LSPTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGK 132
L P WN LI S+ +N F ++S + RM + G D +TYP VIKAC+A+ G+
Sbjct: 147 LHPLP--WNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGR 204
Query: 133 SVHG----SALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGY 188
VHG S+ RC L +V +LI MY + G++ AR++FDRMS R+ VSW A++ Y
Sbjct: 205 VVHGSIEVSSHRCNL----YVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCY 260
Query: 189 VAAGDVVEAKKLFDGM 204
+ + EA KL D M
Sbjct: 261 TSEEKLGEAFKLLDRM 276
Score = 63.5 bits (153), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 85/190 (44%), Gaps = 6/190 (3%)
Query: 21 LKACKRTEHLQ--QIHACIIQRG--LEQDQFLISN-FISLAHSLSTIAYSTTVFSRVLSP 75
LKAC L+ ++ C++ R D + N I++ S + ++ VF +V +
Sbjct: 327 LKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEAN 386
Query: 76 TTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVH 135
+ WN++I N T M +G P+ T ++ + + GK H
Sbjct: 387 SLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFH 446
Query: 136 GSALRCGLEEDVFV-GTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDV 194
LR +D + SL+DMY K GEI A++VFD M R+ V++T+++ GY G
Sbjct: 447 CYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKG 506
Query: 195 VEAKKLFDGM 204
A F M
Sbjct: 507 EVALAWFKDM 516
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 119 bits (297), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/196 (38%), Positives = 106/196 (54%), Gaps = 15/196 (7%)
Query: 18 ATLLKACKRTEHL---QQIHACIIQRGLEQDQFLISNFISL--AHSLSTIAYSTTVFSRV 72
A+LL C QQ+HA I GLE D L+ ++ A +L A + T S +
Sbjct: 87 ASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEI 146
Query: 73 LSPTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGK 132
L P WN LI S+ +N F ++S + RM + G D +TYP VIKAC+A+ G+
Sbjct: 147 LHPLP--WNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGR 204
Query: 133 SVHG----SALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGY 188
VHG S+ RC L +V +LI MY + G++ AR++FDRMS R+ VSW A++ Y
Sbjct: 205 VVHGSIEVSSHRCNL----YVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCY 260
Query: 189 VAAGDVVEAKKLFDGM 204
+ + EA KL D M
Sbjct: 261 TSEEKLGEAFKLLDRM 276
Score = 63.5 bits (153), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 85/190 (44%), Gaps = 6/190 (3%)
Query: 21 LKACKRTEHLQ--QIHACIIQRG--LEQDQFLISN-FISLAHSLSTIAYSTTVFSRVLSP 75
LKAC L+ ++ C++ R D + N I++ S + ++ VF +V +
Sbjct: 327 LKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEAN 386
Query: 76 TTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVH 135
+ WN++I N T M +G P+ T ++ + + GK H
Sbjct: 387 SLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFH 446
Query: 136 GSALRCGLEEDVFV-GTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDV 194
LR +D + SL+DMY K GEI A++VFD M R+ V++T+++ GY G
Sbjct: 447 CYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKG 506
Query: 195 VEAKKLFDGM 204
A F M
Sbjct: 507 EVALAWFKDM 516
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 117 bits (294), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 62/174 (35%), Positives = 90/174 (51%)
Query: 31 QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQN 90
+QIHACII+ + ++ S I + + Y+ TVF R+ W ++ + Q
Sbjct: 290 KQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQT 349
Query: 91 SYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVG 150
+ F M+ +G PD YT I AC+ + EG HG A+ GL V V
Sbjct: 350 GRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVS 409
Query: 151 TSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
SL+ +YGKCG+I D+ ++F+ M+ R+ VSWTAMV Y G VE +LFD M
Sbjct: 410 NSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKM 463
Score = 103 bits (258), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 100/219 (45%), Gaps = 33/219 (15%)
Query: 19 TLLKACKRTEHL---QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSP 75
T+LK H+ +QIH +I+ G E + S + + ++ I+ + VF +
Sbjct: 144 TMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDR 203
Query: 76 TTFLWNTL------------------------------IKSHCQNSYFPATLSAFARMKA 105
T ++N+L IK QN + F MK
Sbjct: 204 NTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKV 263
Query: 106 NGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGD 165
G D Y + V+ AC + EGK +H +R ++ ++VG++LIDMY KC +
Sbjct: 264 QGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHY 323
Query: 166 ARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
A+ VFDRM +NVVSWTAMVVGY G EA K+F M
Sbjct: 324 AKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDM 362
Score = 80.9 bits (198), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 94/216 (43%), Gaps = 32/216 (14%)
Query: 21 LKACKRTEHLQQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLW 80
L A ++ +++ IH II+ + FL +N + + + Y+ VF R+ P F W
Sbjct: 16 LGARNQSRYVKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSW 75
Query: 81 NTLIKSHCQNSYFPATLSAFARMKANGSVP-----DTYTYP----LVIKACSAMCRGLE- 130
N L+ ++ + S F ++ V + Y+ +KA + M R
Sbjct: 76 NNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSA 135
Query: 131 ----------------------GKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARK 168
GK +HG ++ G E + VG+ L+ MY G I DA+K
Sbjct: 136 NLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKK 195
Query: 169 VFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
VF + RN V + +++ G +A G + +A +LF GM
Sbjct: 196 VFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGM 231
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 117 bits (293), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 103/189 (54%), Gaps = 2/189 (1%)
Query: 18 ATLLKACKRTEHLQQIHACIIQRGLEQDQFLISNFISLA--HSLSTIAYSTTVFSRVLSP 75
+ L CK L +IH +I GL +++ +S +S + S + Y+ S++ P
Sbjct: 12 SILRHQCKSMSELYKIHTLLITLGLSEEEPFVSQTLSFSALSSSGDVDYAYKFLSKLSDP 71
Query: 76 TTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVH 135
+ WN +I+ + ++S + +M G +PD TYP ++K+ S + G S+H
Sbjct: 72 PNYGWNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLH 131
Query: 136 GSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVV 195
S ++ GLE D+F+ +LI MYG + ARK+FD M +N+V+W +++ Y +GDVV
Sbjct: 132 CSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVV 191
Query: 196 EAKKLFDGM 204
A+ +FD M
Sbjct: 192 SARLVFDEM 200
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 93/222 (41%), Gaps = 37/222 (16%)
Query: 20 LLKACKRTEHLQ---QIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPT 76
L+K+ R + + +H +++ GLE D F+ + I + S A + +F +
Sbjct: 114 LMKSSSRLSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKN 173
Query: 77 TFLWNT-------------------------------LIKSHCQNSYFPATLSAFARMKA 105
WN+ +I + + + L F +M
Sbjct: 174 LVTWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMR 233
Query: 106 NGSVP-DTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIG 164
GS + T VI AC+ + GK+VH L L V + TSLIDMY KCG IG
Sbjct: 234 MGSSKANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIG 293
Query: 165 DARKVFDRMSGR--NVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
DA VF R S + + + W A++ G + G + E+ +LF M
Sbjct: 294 DAWSVFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKM 335
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 116 bits (290), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 103/185 (55%), Gaps = 3/185 (1%)
Query: 24 CKRTEHLQQIHACIIQRGLEQDQFLISNFISLA-HSLSTIAYSTTVFSRVLSPTTFLWNT 82
C L+QIHA +I+ GL D S ++ S S + Y+ VF+R+ F+WNT
Sbjct: 35 CSTMRELKQIHASLIKTGLISDTVTASRVLAFCCASPSDMNYAYLVFTRINHKNPFVWNT 94
Query: 83 LIKSHCQNSYFPATLSAFARM--KANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALR 140
+I+ ++S+ +S F M + P TYP V KA + + +G+ +HG ++
Sbjct: 95 IIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIK 154
Query: 141 CGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKL 200
GLE+D F+ +++ MY CG + +A ++F M G +VV+W +M++G+ G + +A+ L
Sbjct: 155 EGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNL 214
Query: 201 FDGMP 205
FD MP
Sbjct: 215 FDEMP 219
Score = 73.9 bits (180), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 84/202 (41%), Gaps = 31/202 (15%)
Query: 31 QQIHACIIQRGLEQDQFLISNFISLAHS----------------LSTIAYSTTV------ 68
+Q+H +I+ GLE D F+ + + + + +A+++ +
Sbjct: 146 RQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKC 205
Query: 69 ---------FSRVLSPTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVI 119
F + WN++I +N F L F M+ PD +T ++
Sbjct: 206 GLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLL 265
Query: 120 KACSAMCRGLEGKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVV 179
AC+ + +G+ +H +R E + V T+LIDMY KCG I + VF+ + +
Sbjct: 266 NACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLS 325
Query: 180 SWTAMVVGYVAAGDVVEAKKLF 201
W +M++G G A LF
Sbjct: 326 CWNSMILGLANNGFEERAMDLF 347
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 115 bits (289), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 87/159 (54%)
Query: 30 LQQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQ 89
L+ +H+ II L + L + SL +A + VF + + N +I+S+
Sbjct: 58 LRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVN 117
Query: 90 NSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFV 149
N ++ + F M PD YT+P V+KACS + G+ +HGSA + GL +FV
Sbjct: 118 NGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFV 177
Query: 150 GTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGY 188
G L+ MYGKCG + +AR V D MS R+VVSW ++VVGY
Sbjct: 178 GNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGY 216
Score = 88.2 bits (217), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 75/145 (51%)
Query: 60 STIAYSTTVFSRVLSPTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVI 119
+ Y +F ++ + WN +I + +N+ + ++RM+A+G PD + V+
Sbjct: 257 ENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVL 316
Query: 120 KACSAMCRGLEGKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVV 179
AC GK +HG R L ++ + +LIDMY KCG + AR VF+ M R+VV
Sbjct: 317 PACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVV 376
Query: 180 SWTAMVVGYVAAGDVVEAKKLFDGM 204
SWTAM+ Y +G +A LF +
Sbjct: 377 SWTAMISAYGFSGRGCDAVALFSKL 401
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 115 bits (289), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 64/185 (34%), Positives = 106/185 (57%)
Query: 20 LLKACKRTEHLQQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFL 79
+++A R + LQQ+HA +I G + + L++ I+LA S IAY+ +F V P FL
Sbjct: 15 IVRAGPRVKQLQQVHAHLIVTGYGRSRSLLTKLITLACSARAIAYTHLLFLSVPLPDDFL 74
Query: 80 WNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSAL 139
+N++IKS + ++ + RM ++ P YT+ VIK+C+ + GK VH A+
Sbjct: 75 FNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAV 134
Query: 140 RCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKK 199
G D +V +L+ Y KCG++ AR+VFDRM +++V+W ++V G+ G EA +
Sbjct: 135 VSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQ 194
Query: 200 LFDGM 204
+F M
Sbjct: 195 VFYQM 199
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 98/189 (51%), Gaps = 3/189 (1%)
Query: 19 TLLKACKRTEHL---QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSP 75
+++K+C L + +H + G D ++ + ++ + + VF R+
Sbjct: 112 SVIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEK 171
Query: 76 TTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVH 135
+ WN+L+ QN + F +M+ +G PD+ T+ ++ AC+ G VH
Sbjct: 172 SIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVH 231
Query: 136 GSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVV 195
+ GL+ +V +GT+LI++Y +CG++G AR+VFD+M NV +WTAM+ Y G
Sbjct: 232 QYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQ 291
Query: 196 EAKKLFDGM 204
+A +LF+ M
Sbjct: 292 QAVELFNKM 300
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 81/180 (45%), Gaps = 17/180 (9%)
Query: 19 TLLKACKRTEHLQ---QIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSP 75
+LL AC +T + +H II GL+ + L + I+L + + VF ++
Sbjct: 213 SLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMKET 272
Query: 76 TTFLWNTLIKSHCQNSYFPATLSAFARMKAN-GSVPDTYTYPLVIKACSAMCRGLEGKSV 134
W +I ++ + Y + F +M+ + G +P+ T+ V+ AC+ EG+SV
Sbjct: 273 NVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSV 332
Query: 135 HGSALRC-----GLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVS----WTAMV 185
+ + G+E V ++DM G+ G + +A K ++ + WTAM+
Sbjct: 333 YKRMTKSYRLIPGVEHHV----CMVDMLGRAGFLDEAYKFIHQLDATGKATAPALWTAML 388
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 115 bits (289), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 66/191 (34%), Positives = 102/191 (53%), Gaps = 7/191 (3%)
Query: 19 TLLKACKRTEHLQQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVL----S 74
+LL +CK L QIH I+ G++ D + I H +I+ + R+L
Sbjct: 10 SLLNSCKNLRALTQIHGLFIKYGVDTDSYFTGKLI--LHCAISISDALPYARRLLLCFPE 67
Query: 75 PTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSV-PDTYTYPLVIKACSAMCRGLEGKS 133
P F++NTL++ + ++ +++ F M G V PD++++ VIKA G
Sbjct: 68 PDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQ 127
Query: 134 VHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGD 193
+H AL+ GLE +FVGT+LI MYG CG + ARKVFD M N+V+W A++ D
Sbjct: 128 MHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGND 187
Query: 194 VVEAKKLFDGM 204
V A+++FD M
Sbjct: 188 VAGAREIFDKM 198
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 77/167 (46%), Gaps = 7/167 (4%)
Query: 45 DQFLISNFISLAHSLS------TIAYSTTVFSRVLSPTTFLWNTLIKSHCQNSYFPATLS 98
D+ L+ N S L+ + + +FS + W+T+I N F +
Sbjct: 196 DKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFL 255
Query: 99 AFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVGTSLIDMYG 158
F ++ G P+ + V+ ACS GK +HG + G V V +LIDMY
Sbjct: 256 YFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYS 315
Query: 159 KCGEIGDARKVFDRM-SGRNVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
+CG + AR VF+ M R +VSWT+M+ G G EA +LF+ M
Sbjct: 316 RCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEM 362
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 115 bits (289), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 105/190 (55%), Gaps = 3/190 (1%)
Query: 21 LKACKRTEHLQQ---IHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTT 77
L AC L++ IH ++ GL+++ ++++ IS+ + + ++F ++ S T
Sbjct: 344 LHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTL 403
Query: 78 FLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGS 137
WN +I QN L+ F++M++ PDT+TY VI A + + K +HG
Sbjct: 404 VSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGV 463
Query: 138 ALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEA 197
+R L+++VFV T+L+DMY KCG I AR +FD MS R+V +W AM+ GY G A
Sbjct: 464 VMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAA 523
Query: 198 KKLFDGMPPG 207
+LF+ M G
Sbjct: 524 LELFEEMQKG 533
Score = 113 bits (283), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 90/175 (51%)
Query: 18 ATLLKACKRTEHLQQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTT 77
A LL+ C + L+QI + + GL Q+ F + +SL ++ + VF + S
Sbjct: 41 ALLLERCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLN 100
Query: 78 FLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGS 137
L++T++K + S L F RM+ + P Y + ++K C GK +HG
Sbjct: 101 VLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGL 160
Query: 138 ALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAG 192
++ G D+F T L +MY KC ++ +ARKVFDRM R++VSW +V GY G
Sbjct: 161 LVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNG 215
Score = 103 bits (256), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 90/188 (47%), Gaps = 3/188 (1%)
Query: 20 LLKACKRTEHL---QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPT 76
LLK C L ++IH +++ G D F ++ ++ + + VF R+
Sbjct: 141 LLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERD 200
Query: 77 TFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHG 136
WNT++ + QN L M P T V+ A SA+ GK +HG
Sbjct: 201 LVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHG 260
Query: 137 SALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVE 196
A+R G + V + T+L+DMY KCG + AR++FD M RNVVSW +M+ YV + E
Sbjct: 261 YAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKE 320
Query: 197 AKKLFDGM 204
A +F M
Sbjct: 321 AMLIFQKM 328
Score = 82.0 bits (201), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 83/174 (47%)
Query: 31 QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQN 90
++IH ++ G + + + + + ++ + +F +L WN++I ++ QN
Sbjct: 256 KEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQN 315
Query: 91 SYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVG 150
+ F +M G P + + AC+ + G+ +H ++ GL+ +V V
Sbjct: 316 ENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVV 375
Query: 151 TSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
SLI MY KC E+ A +F ++ R +VSW AM++G+ G ++A F M
Sbjct: 376 NSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQM 429
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 115 bits (288), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 65/191 (34%), Positives = 103/191 (53%), Gaps = 5/191 (2%)
Query: 19 TLLKACKRTEHLQQIHACIIQRGLEQDQ---FLISNFISLAHSLSTIAYSTTVFSRVLSP 75
+L + C L+Q+HA ++ ++ FL + L+ S S + Y+ VF + +
Sbjct: 53 SLAETCSDMSQLKQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFDSIENH 112
Query: 76 TTFLWNTLIKSHCQN-SYFPATLSAFARMKANG-SVPDTYTYPLVIKACSAMCRGLEGKS 133
++F+WNTLI++ + S + +M G S PD +T+P V+KAC+ + EGK
Sbjct: 113 SSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQ 172
Query: 134 VHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGD 193
VH ++ G DV+V LI +YG CG + ARKVFD M R++VSW +M+ V G+
Sbjct: 173 VHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGE 232
Query: 194 VVEAKKLFDGM 204
A +LF M
Sbjct: 233 YDSALQLFREM 243
Score = 90.1 bits (222), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 92/191 (48%), Gaps = 7/191 (3%)
Query: 20 LLKACKRT---EHLQQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPT 76
+LKAC +Q+H I++ G D ++ + I L S + + VF + +
Sbjct: 157 VLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERS 216
Query: 77 TFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHG 136
WN++I + + + + L F M+ + PD YT V+ AC+ + G H
Sbjct: 217 LVSWNSMIDALVRFGEYDSALQLFREMQRSFE-PDGYTMQSVLSACAGLGSLSLGTWAHA 275
Query: 137 SALR-CGLE--EDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGD 193
LR C ++ DV V SLI+MY KCG + A +VF M R++ SW AM++G+ G
Sbjct: 276 FLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGR 335
Query: 194 VVEAKKLFDGM 204
EA FD M
Sbjct: 336 AEEAMNFFDRM 346
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2761195-2764281 REVERSE
LENGTH=1028
Length = 1028
Score = 115 bits (287), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 103/193 (53%), Gaps = 6/193 (3%)
Query: 18 ATLLKACKRTEHLQ---QIHACIIQRGLEQD-QFLISNFISLAHSLSTIAYSTTVFSRVL 73
AT+++AC + E L Q H I +RG + ++L + + + + + + +FS +
Sbjct: 633 ATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELS 692
Query: 74 SPTTF-LWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGK 132
SP + LW ++ H QN ++ L + M+ +G +PD T+ V++ CS + EG+
Sbjct: 693 SPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGR 752
Query: 133 SVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGR-NVVSWTAMVVGYVAA 191
++H + D +LIDMY KCG++ + +VFD M R NVVSW +++ GY
Sbjct: 753 AIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKN 812
Query: 192 GDVVEAKKLFDGM 204
G +A K+FD M
Sbjct: 813 GYAEDALKIFDSM 825
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 99/189 (52%), Gaps = 4/189 (2%)
Query: 19 TLLKACKRTEHLQ---QIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSP 75
+LL C + L+ Q H+ II++ L ++ F+ + + + + + +F R+
Sbjct: 433 SLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDR 492
Query: 76 TTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVH 135
WNT+I S+ Q+ F RM G V D +KAC+ + +GK VH
Sbjct: 493 DNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVH 552
Query: 136 GSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVV 195
+++CGL+ D+ G+SLIDMY KCG I DARKVF + +VVS A++ GY + ++
Sbjct: 553 CLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGY-SQNNLE 611
Query: 196 EAKKLFDGM 204
EA LF M
Sbjct: 612 EAVVLFQEM 620
Score = 100 bits (248), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 88/172 (51%)
Query: 33 IHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQNSY 92
+HA I+ GL + ++ S+ +S+ + + VF + WN +I+ + N
Sbjct: 349 VHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGE 408
Query: 93 FPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVGTS 152
+ F MK++G D +T+ ++ C+A G H ++ L +++FVG +
Sbjct: 409 SHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNA 468
Query: 153 LIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
L+DMY KCG + DAR++F+RM R+ V+W ++ YV + EA LF M
Sbjct: 469 LVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRM 520
Score = 88.2 bits (217), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 87/174 (50%), Gaps = 1/174 (0%)
Query: 31 QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQN 90
+ +H+ + G++ + L + + L + ++Y+ F L WN+++ +
Sbjct: 80 KAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFD-FLEKDVTAWNSMLSMYSSI 138
Query: 91 SYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVG 150
L +F + N P+ +T+ +V+ C+ G+ +H S ++ GLE + + G
Sbjct: 139 GKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCG 198
Query: 151 TSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
+L+DMY KC I DAR+VF+ + N V WT + GYV AG EA +F+ M
Sbjct: 199 GALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERM 252
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 73/166 (43%)
Query: 39 QRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQNSYFPATLS 98
G D I+ L + + +F + SP WN +I H + +
Sbjct: 254 DEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIE 313
Query: 99 AFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVGTSLIDMYG 158
F M+ + T V+ A + G VH A++ GL +++VG+SL+ MY
Sbjct: 314 YFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYS 373
Query: 159 KCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
KC ++ A KVF+ + +N V W AM+ GY G+ + +LF M
Sbjct: 374 KCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDM 419
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 89/197 (45%), Gaps = 10/197 (5%)
Query: 19 TLLKACKRTEHLQQ---IHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSP 75
T+L+ C L++ IH+ I + D+ + I + + S+ VF +
Sbjct: 737 TVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRR 796
Query: 76 TTFL-WNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSV 134
+ + WN+LI + +N Y L F M+ + +PD T+ V+ ACS + +G+ +
Sbjct: 797 SNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKI 856
Query: 135 HGSAL-RCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGR-NVVSWTAMVVGYVAAG 192
+ + G+E V ++D+ G+ G + +A + + + + W++++ G
Sbjct: 857 FEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHG 916
Query: 193 D----VVEAKKLFDGMP 205
D + A+KL + P
Sbjct: 917 DDIRGEISAEKLIELEP 933
Score = 47.4 bits (111), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 131 GKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVA 190
GK+VH +L G++ + +G +++D+Y KC ++ A K FD + ++V +W +M+ Y +
Sbjct: 79 GKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLE-KDVTAWNSMLSMYSS 137
Query: 191 AG 192
G
Sbjct: 138 IG 139
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 114 bits (285), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 103/189 (54%), Gaps = 3/189 (1%)
Query: 19 TLLKACKRTEHLQQIHACIIQRGLEQDQFLISNFISLA--HSLSTIAYSTTVFSRVLSPT 76
+L++ C L+Q H +I+ G D + S ++A S +++ Y+ VF + P
Sbjct: 35 SLIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPN 94
Query: 77 TFLWNTLIKSHCQNSYFPATLSAFARMKANGS-VPDTYTYPLVIKACSAMCRGLEGKSVH 135
+F WNTLI+++ ++ AF M + P+ YT+P +IKA + + G+S+H
Sbjct: 95 SFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLH 154
Query: 136 GSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVV 195
G A++ + DVFV SLI Y CG++ A KVF + ++VVSW +M+ G+V G
Sbjct: 155 GMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPD 214
Query: 196 EAKKLFDGM 204
+A +LF M
Sbjct: 215 KALELFKKM 223
Score = 81.6 bits (200), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 89/190 (46%), Gaps = 5/190 (2%)
Query: 20 LLKACKRTEHL---QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPT 76
L+KA L Q +H ++ + D F+ ++ I S + + VF+ +
Sbjct: 137 LIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKD 196
Query: 77 TFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLE-GKSVH 135
WN++I Q L F +M++ T V+ AC A R LE G+ V
Sbjct: 197 VVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSAC-AKIRNLEFGRQVC 255
Query: 136 GSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVV 195
+ ++ + +++DMY KCG I DA+++FD M ++ V+WT M+ GY + D
Sbjct: 256 SYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYE 315
Query: 196 EAKKLFDGMP 205
A+++ + MP
Sbjct: 316 AAREVLNSMP 325
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 63/126 (50%), Gaps = 1/126 (0%)
Query: 80 WNTLIKSHCQNSYFPATLSAFARMKANGSVP-DTYTYPLVIKACSAMCRGLEGKSVHGSA 138
WN LI ++ QN L F ++ ++ + T + AC+ + G+ +H
Sbjct: 332 WNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYI 391
Query: 139 LRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAK 198
+ G+ + V ++LI MY KCG++ +R+VF+ + R+V W+AM+ G G EA
Sbjct: 392 KKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAV 451
Query: 199 KLFDGM 204
+F M
Sbjct: 452 DMFYKM 457
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 114 bits (285), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 62/182 (34%), Positives = 103/182 (56%), Gaps = 8/182 (4%)
Query: 30 LQQIHACIIQRGL-----EQDQFLISNFISLAHSLSTIAYSTTVFSRVLSP-TTFLWNTL 83
L+QIHA I+ G+ E + LI +SL S ++Y+ VFS++ P F+WNTL
Sbjct: 33 LRQIHAFSIRHGVSISDAELGKHLIFYLVSLP-SPPPMSYAHKVFSKIEKPINVFIWNTL 91
Query: 84 IKSHCQNSYFPATLSAFARMKANGSV-PDTYTYPLVIKACSAMCRGLEGKSVHGSALRCG 142
I+ + + + S + M+ +G V PDT+TYP +IKA + M G+++H +R G
Sbjct: 92 IRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRSG 151
Query: 143 LEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFD 202
++V SL+ +Y CG++ A KVFD+M +++V+W +++ G+ G EA L+
Sbjct: 152 FGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYT 211
Query: 203 GM 204
M
Sbjct: 212 EM 213
Score = 94.7 bits (234), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 89/174 (51%)
Query: 31 QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQN 90
+ IH+ +I+ G ++ ++ + L + +A + VF ++ WN++I +N
Sbjct: 141 ETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAEN 200
Query: 91 SYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVG 150
L+ + M + G PD +T ++ AC+ + GK VH ++ GL ++
Sbjct: 201 GKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSS 260
Query: 151 TSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
L+D+Y +CG + +A+ +FD M +N VSWT+++VG G EA +LF M
Sbjct: 261 NVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYM 314
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 114 bits (285), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 96/178 (53%), Gaps = 4/178 (2%)
Query: 20 LLKACKRTEHLQQIHACIIQRGLEQDQFLISNFISLAHSLS---TIAYSTTVFSRVLSPT 76
LK C +HL QIH I L+ D F+IS + ++ SLS +A++ T+ T
Sbjct: 19 FLKLCSSIKHLLQIHGQIHLSSLQNDSFIISELVRVS-SLSLAKDLAFARTLLLHSSDST 77
Query: 77 TFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHG 136
WN L + + + ++ ++ MK G P+ T+P ++KAC++ G+ +
Sbjct: 78 PSTWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQV 137
Query: 137 SALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDV 194
L+ G + DV+VG +LI +YG C + DARKVFD M+ RNVVSW +++ V G +
Sbjct: 138 EVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKL 195
Score = 91.3 bits (225), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 90/188 (47%), Gaps = 5/188 (2%)
Query: 20 LLKACKRTEHL---QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPT 76
LLKAC L +QI +++ G + D ++ +N I L + + + VF +
Sbjct: 119 LLKACASFLGLTAGRQIQVEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERN 178
Query: 77 TFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHG 136
WN+++ + +N F M PD T +++ AC GK VH
Sbjct: 179 VVSWNSIMTALVENGKLNLVFECFCEMIGKRFCPDETTMVVLLSACGGNLS--LGKLVHS 236
Query: 137 SALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVE 196
+ LE + +GT+L+DMY K G + AR VF+RM +NV +W+AM+VG G E
Sbjct: 237 QVMVRELELNCRLGTALVDMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEE 296
Query: 197 AKKLFDGM 204
A +LF M
Sbjct: 297 ALQLFSKM 304
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 113 bits (283), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 69/192 (35%), Positives = 99/192 (51%), Gaps = 7/192 (3%)
Query: 18 ATLLKACKRTEHLQ---QIHACIIQRGLEQDQFLISNFISL--AHSLSTIAYSTTVFSRV 72
A+LL AC Q+HA I G+E L+ ++ A +L A S S +
Sbjct: 47 ASLLSACVDVRAFLAGVQVHAHCISSGVEYHSVLVPKLVTFYSAFNLHNEAQSIIENSDI 106
Query: 73 LSPTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGK 132
L P WN LI S+ +N F ++A+ RM + G PD +TYP V+KAC G+
Sbjct: 107 LHPLP--WNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGR 164
Query: 133 SVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAG 192
VHGS + ++V +LI MY + +G AR++FDRM R+ VSW A++ Y + G
Sbjct: 165 VVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEG 224
Query: 193 DVVEAKKLFDGM 204
EA +LFD M
Sbjct: 225 MWSEAFELFDKM 236
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 84/188 (44%), Gaps = 4/188 (2%)
Query: 21 LKACKRTEHL---QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTT 77
LKAC + ++IH I + + + I++ + ++ VF + +
Sbjct: 287 LKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSL 346
Query: 78 FLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGS 137
WN++I + Q + M G P++ T ++ C+ + GK H
Sbjct: 347 CTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCY 406
Query: 138 ALRCGLEED-VFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVE 196
LR +D + SL+D+Y K G+I A++V D MS R+ V++T+++ GY G+
Sbjct: 407 ILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGV 466
Query: 197 AKKLFDGM 204
A LF M
Sbjct: 467 ALALFKEM 474
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 54/125 (43%)
Query: 80 WNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSAL 139
WN + Q + L +RM+ + D + +KACS + GK +HG A+
Sbjct: 248 WNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIHGLAI 307
Query: 140 RCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKK 199
+ V +LI MY KC ++ A VF + ++ +W +++ GY EA
Sbjct: 308 HSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSEEASH 367
Query: 200 LFDGM 204
L M
Sbjct: 368 LLREM 372
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 113 bits (283), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 63/187 (33%), Positives = 99/187 (52%), Gaps = 3/187 (1%)
Query: 21 LKACKRTEHLQQIHACIIQRGLEQDQFLISNFISLAHSLST---IAYSTTVFSRVLSPTT 77
L+ C + E L+QIHA +++ GL QD + I+ F+S S ++ + Y+ VF P T
Sbjct: 21 LQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDT 80
Query: 78 FLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGS 137
FLWN +I+ + +L + RM + + + YT+P ++KACS + E +H
Sbjct: 81 FLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQ 140
Query: 138 ALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEA 197
+ G E DV+ SLI+ Y G A +FDR+ + VSW +++ GYV AG + A
Sbjct: 141 ITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIA 200
Query: 198 KKLFDGM 204
LF M
Sbjct: 201 LTLFRKM 207
Score = 87.0 bits (214), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 93/220 (42%), Gaps = 34/220 (15%)
Query: 19 TLLKACKRT---EHLQQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSP 75
+LLKAC E QIHA I + G E D + +++ I+ + +F R+ P
Sbjct: 120 SLLKACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEP 179
Query: 76 TTFLWNTLIKSHCQNSYFPATLSAFARMKANGSV-------------------------- 109
WN++IK + + L+ F +M ++
Sbjct: 180 DDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQ 239
Query: 110 -----PDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIG 164
PD + + AC+ + +GK +H + + D +G LIDMY KCGE+
Sbjct: 240 NSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEME 299
Query: 165 DARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
+A +VF + ++V +WTA++ GY G EA F M
Sbjct: 300 EALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEM 339
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 74/173 (42%), Gaps = 5/173 (2%)
Query: 18 ATLLKACKRTEHLQQ---IHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLS 74
A L AC + L+Q IH+ + + + D L I + + + VF +
Sbjct: 251 ANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKK 310
Query: 75 PTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSV 134
+ W LI + + + +S F M+ G P+ T+ V+ ACS EGK +
Sbjct: 311 KSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLI 370
Query: 135 HGSALR-CGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGR-NVVSWTAMV 185
S R L+ + ++D+ G+ G + +A++ M + N V W A++
Sbjct: 371 FYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALL 423
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 112 bits (279), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 101/191 (52%), Gaps = 4/191 (2%)
Query: 18 ATLLKACKRTEHL---QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLS 74
+ +LKAC E L +QIHAC+ + GLE + + + + S+ + F +
Sbjct: 289 SVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIRE 348
Query: 75 PTTFLWNTLIKSHCQNSYFPATLSAFARMKA-NGSVPDTYTYPLVIKACSAMCRGLEGKS 133
P W+ +I +CQ S F + F +++ N S+ +++TY + +ACS + G
Sbjct: 349 PNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQ 408
Query: 134 VHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGD 193
VH A++ L + ++LI MY KCG + DA +VF+ M ++V+WTA + G+ G+
Sbjct: 409 VHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGN 468
Query: 194 VVEAKKLFDGM 204
EA +LF+ M
Sbjct: 469 ASEALRLFEKM 479
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 87/189 (46%), Gaps = 3/189 (1%)
Query: 19 TLLKACKRTEHL---QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSP 75
TLLK+ L +QIHA +I+ GL + + + +++ + + VF ++
Sbjct: 189 TLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVK 248
Query: 76 TTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVH 135
L+ + Q L F + G D++ + +V+KAC+++ GK +H
Sbjct: 249 KPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIH 308
Query: 136 GSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVV 195
+ GLE +V VGT L+D Y KC A + F + N VSW+A++ GY
Sbjct: 309 ACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFE 368
Query: 196 EAKKLFDGM 204
EA K F +
Sbjct: 369 EAVKTFKSL 377
Score = 70.9 bits (172), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 92/187 (49%), Gaps = 7/187 (3%)
Query: 20 LLKACKRTEHLQQ---IHACIIQRGLEQDQFLISN-FISLAHSLSTIAYSTTVFSRVLSP 75
L +AC+ L +H ++ G+E L+ N + + ++ + +F +
Sbjct: 89 LFEACRELRSLSHGRLLHD-RMRMGIENPSVLLQNCVLQMYCECRSLEDADKLFDEMSEL 147
Query: 76 TTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLE-GKSV 134
T+I ++ + + F+ M A+G P + Y ++K+ R L+ G+ +
Sbjct: 148 NAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPSSMYTTLLKSL-VNPRALDFGRQI 206
Query: 135 HGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDV 194
H +R GL + + T +++MY KCG + A++VFD+M+ + V+ T ++VGY AG
Sbjct: 207 HAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRA 266
Query: 195 VEAKKLF 201
+A KLF
Sbjct: 267 RDALKLF 273
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 52/104 (50%), Gaps = 2/104 (1%)
Query: 102 RMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEE-DVFVGTSLIDMYGKC 160
M G +Y+Y + +AC + G+ +H +R G+E V + ++ MY +C
Sbjct: 73 EMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLH-DRMRMGIENPSVLLQNCVLQMYCEC 131
Query: 161 GEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
+ DA K+FD MS N VS T M+ Y G + +A LF GM
Sbjct: 132 RSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGM 175
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 66/158 (41%), Gaps = 2/158 (1%)
Query: 32 QIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQNS 91
Q+HA I+R L Q+ S I++ + + VF + +P W I H
Sbjct: 408 QVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYG 467
Query: 92 YFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALR-CGLEEDVFVG 150
L F +M + G P++ T+ V+ ACS +GK + LR + +
Sbjct: 468 NASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHY 527
Query: 151 TSLIDMYGKCGEIGDARKVFDRMSGR-NVVSWTAMVVG 187
+ID+Y + G + +A K M + +SW + G
Sbjct: 528 DCMIDIYARSGLLDEALKFMKNMPFEPDAMSWKCFLSG 565
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 112 bits (279), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 69/203 (33%), Positives = 110/203 (54%), Gaps = 19/203 (9%)
Query: 20 LLKACKRTEHLQQIHACIIQRGLEQDQF----LISNFI--------SLAHSLSTIAYSTT 67
LLK C+ +HL Q HA I G + F + +N + S + S ++Y+T+
Sbjct: 10 LLKLCRTLKHLHQFHAQFITSGRISNDFKQNSVFANVLFAITSISPSASASKEVVSYATS 69
Query: 68 VFSRVLSPTTFLWNTLIKSHCQNSYFPATLSA---FARMKANGSVPDTYTYPLVIKACSA 124
VF + +P+TF +NT+I+ + P++LS+ F M+ PD +T+P V KAC+A
Sbjct: 70 VFRFITNPSTFCFNTIIRICTLHE--PSSLSSKRFFVEMRRRSVPPDFHTFPFVFKACAA 127
Query: 125 MCRG--LEGKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWT 182
G K++H ALR GL D+F +LI +Y I A ++FD R+VV++
Sbjct: 128 KKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDENPQRDVVTYN 187
Query: 183 AMVVGYVAAGDVVEAKKLFDGMP 205
++ G V A ++V A++LFD MP
Sbjct: 188 VLIDGLVKAREIVRARELFDSMP 210
Score = 70.1 bits (170), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 56/114 (49%)
Query: 80 WNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSAL 139
WN+LI + Q ++ + F M A G PD + AC+ +GK++H
Sbjct: 217 WNSLISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTK 276
Query: 140 RCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGD 193
R L D F+ T L+D Y KCG I A ++F+ S + + +W AM+ G G+
Sbjct: 277 RKRLFIDSFLATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGN 330
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 111 bits (278), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 101/187 (54%), Gaps = 2/187 (1%)
Query: 18 ATLLKACKRTEHLQQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTT 77
+++L++C ++ +H II+ GLE D F+ S I + L + +VF +++
Sbjct: 166 SSVLRSCNGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDA 225
Query: 78 FLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGS 137
+WN++I QNS L F RMK G + + T V++AC+ + G H
Sbjct: 226 IVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVH 285
Query: 138 ALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEA 197
++ ++D+ + +L+DMY KCG + DA +VF++M R+V++W+ M+ G G EA
Sbjct: 286 IVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEA 343
Query: 198 KKLFDGM 204
KLF+ M
Sbjct: 344 LKLFERM 350
Score = 77.0 bits (188), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 78/158 (49%), Gaps = 3/158 (1%)
Query: 47 FLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQNSYFPATLSAFARMKAN 106
FL++ I++ + + + +F ++ W T+I ++ + L M +
Sbjct: 97 FLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRD 156
Query: 107 GSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDA 166
P+ YTY V+++C+ M + + +H ++ GLE DVFV ++LID++ K GE DA
Sbjct: 157 NVRPNVYTYSSVLRSCNGMS---DVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDA 213
Query: 167 RKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
VFD M + + W +++ G+ A +LF M
Sbjct: 214 LSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRM 251
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 64/132 (48%), Gaps = 20/132 (15%)
Query: 63 AYSTTVFSRVLSPTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKAC 122
+YS+T + +LS T L C P + A ++++G D+ TY +IK C
Sbjct: 20 SYSSTDQTLLLSEFTRL--------CYQRDLPRAMKAMDSLQSHGLWADSATYSELIKCC 71
Query: 123 SAMCRGLEGKSVHGSALRC------GLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGR 176
+ ++VH L C G +F+ LI+MY K + DA ++FD+M R
Sbjct: 72 ------ISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQR 125
Query: 177 NVVSWTAMVVGY 188
NV+SWT M+ Y
Sbjct: 126 NVISWTTMISAY 137
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 81/172 (47%), Gaps = 7/172 (4%)
Query: 19 TLLKACKRTEHLQ---QIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSP 75
++L+AC L+ Q H I++ +QD L + + + ++ + VF+++
Sbjct: 265 SVLRACTGLALLELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKER 322
Query: 76 TTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVH 135
W+T+I QN Y L F RMK++G+ P+ T V+ ACS +G
Sbjct: 323 DVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYF 382
Query: 136 GSALRC-GLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGR-NVVSWTAMV 185
S + G++ +ID+ GK G++ DA K+ + M + V+W ++
Sbjct: 383 RSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLL 434
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 111 bits (278), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 60/175 (34%), Positives = 99/175 (56%), Gaps = 2/175 (1%)
Query: 31 QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQN 90
+QIHA +I+RG + + ++++ + L ++ + F + WNTLI S +
Sbjct: 233 KQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLI-SELER 291
Query: 91 SYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVG 150
S L F R ++ G VP+ YT+ ++ AC+ + G+ +HG R G ++V +
Sbjct: 292 SDSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELA 351
Query: 151 TSLIDMYGKCGEIGDARKVFDRM-SGRNVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
+LIDMY KCG I D+++VF + RN+VSWT+M++GY + G EA +LFD M
Sbjct: 352 NALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKM 406
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 74/163 (45%), Gaps = 1/163 (0%)
Query: 43 EQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQNSYFPATLSAFAR 102
++ L +N I + + ++F + W +I + ++Y F
Sbjct: 42 KKHHILATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHE 101
Query: 103 MKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVGTSLIDMYGKCGE 162
M G+ P+ +T V+K+C M G VHG ++ G+E ++V ++++MY C
Sbjct: 102 MVKQGTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSV 161
Query: 163 IGDAR-KVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
+A +F + +N V+WT ++ G+ GD + K++ M
Sbjct: 162 TMEAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQM 204
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/172 (19%), Positives = 84/172 (48%), Gaps = 4/172 (2%)
Query: 18 ATLLKACKRTEHLQQ---IHACIIQRGLEQDQFLISNFISLAHSLS-TIAYSTTVFSRVL 73
+++LK+C+ + L +H +++ G+E ++ + +++ + S T+ + +F +
Sbjct: 115 SSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACLIFRDIK 174
Query: 74 SPTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKS 133
W TLI L + +M + Y + ++A +++ GK
Sbjct: 175 VKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASIDSVTTGKQ 234
Query: 134 VHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMV 185
+H S ++ G + ++ V S++D+Y +CG + +A+ F M +++++W ++
Sbjct: 235 IHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLI 286
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 84/175 (48%), Gaps = 10/175 (5%)
Query: 19 TLLKACKRTEHL---QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSP 75
+L+ AC L QQ+H I +RG ++ L + I + I S VF ++
Sbjct: 318 SLVAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDR 377
Query: 76 TTFL-WNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKAC---SAMCRGLEG 131
+ W +++ + + Y + F +M ++G PD + V+ AC + +GL+
Sbjct: 378 RNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKY 437
Query: 132 KSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGR-NVVSWTAMV 185
+V S + D++ ++D+ G+ G+IG+A ++ +RM + + +W A++
Sbjct: 438 FNVMESEYGINPDRDIY--NCVVDLLGRAGKIGEAYELVERMPFKPDESTWGAIL 490
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 111 bits (278), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 63/167 (37%), Positives = 92/167 (55%), Gaps = 1/167 (0%)
Query: 28 EHLQQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSH 87
E L++ +A II GL ++ F+ S IS S S+ VF V FLWN++IK+H
Sbjct: 41 ESLRKHNALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAH 100
Query: 88 CQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALR-CGLEED 146
N + +L F M +G PD +T P+V+ AC+ + G VHG L+ G + +
Sbjct: 101 FSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRN 160
Query: 147 VFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGD 193
VG S + Y KCG + DA VFD M R+VV+WTA++ G+V G+
Sbjct: 161 TAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGE 207
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 82/176 (46%), Gaps = 5/176 (2%)
Query: 31 QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKS--HC 88
+ +H +++ L+ ++++ I L + + + +F WN +I S HC
Sbjct: 453 KSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCEA-DTNVITWNAMIASYVHC 511
Query: 89 QNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVF 148
+ S ++ F RM + P + T ++ AC G+ +H E ++
Sbjct: 512 EQS--EKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLS 569
Query: 149 VGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
+ +LIDMY KCG + +R++FD + ++ V W M+ GY GDV A LFD M
Sbjct: 570 LSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVESAIALFDQM 625
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 86/175 (49%), Gaps = 2/175 (1%)
Query: 31 QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSP-TTFLWNTLIKSHCQ 89
+ H +I+ D + ++ +S+ ++ + +F R+ WNT++K + +
Sbjct: 351 KAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGK 410
Query: 90 NSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFV 149
+ F +++ G D+ + VI +CS + L GKS+H ++ L+ + V
Sbjct: 411 MKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISV 470
Query: 150 GTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
SLID+YGK G++ A ++F + NV++W AM+ YV +A LFD M
Sbjct: 471 VNSLIDLYGKMGDLTVAWRMFCE-ADTNVITWNAMIASYVHCEQSEKAIALFDRM 524
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 81/183 (44%), Gaps = 9/183 (4%)
Query: 33 IHACIIQRG-LEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQNS 91
+H +++ G +++ + ++F+ + + VF + W +I H QN
Sbjct: 147 VHGLVLKHGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNG 206
Query: 92 YFPATLSAFARMKANGS---VPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVF 148
L +M + GS P+ T +ACS + EG+ +HG A++ GL F
Sbjct: 207 ESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKF 266
Query: 149 VGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLF-----DG 203
V +S+ Y K G +A F + ++ SWT+++ +GD+ E+ +F G
Sbjct: 267 VQSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKG 326
Query: 204 MPP 206
M P
Sbjct: 327 MHP 329
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 71/172 (41%), Gaps = 4/172 (2%)
Query: 21 LKACKRTEHLQQ---IHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTT 77
+AC L++ +H ++ GL +F+ S+ S + + F +
Sbjct: 237 FQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDM 296
Query: 78 FLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGS 137
F W ++I S ++ + F M+ G PD +I M +GK+ HG
Sbjct: 297 FSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGF 356
Query: 138 ALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGR-NVVSWTAMVVGY 188
+R D V SL+ MY K + A K+F R+S N +W M+ GY
Sbjct: 357 VIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGY 408
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 111 bits (277), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 99/184 (53%), Gaps = 6/184 (3%)
Query: 19 TLLKACKRTEHLQQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTF 78
++L++CK H+ IHA II+ +QD F++ I + +L ++ Y+ VFS V +P +
Sbjct: 34 SVLRSCKNIAHVPSIHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFSYVSNPNVY 93
Query: 79 LWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACS-AMCRGLEGKSVHGS 137
L+ +I + +S + RM N +PD Y V+KAC +CR +H
Sbjct: 94 LYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKACDLKVCR-----EIHAQ 148
Query: 138 ALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEA 197
L+ G VG ++++YGK GE+ +A+K+FD M R+ V+ T M+ Y G + EA
Sbjct: 149 VLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEA 208
Query: 198 KKLF 201
+LF
Sbjct: 209 LELF 212
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 66/143 (46%)
Query: 62 IAYSTTVFSRVLSPTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKA 121
I + +F V T W +I +N L F M+ + +T V+ A
Sbjct: 205 IKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSA 264
Query: 122 CSAMCRGLEGKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSW 181
CS + G+ VH +E FVG +LI+MY +CG+I +AR+VF M ++V+S+
Sbjct: 265 CSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVISY 324
Query: 182 TAMVVGYVAAGDVVEAKKLFDGM 204
M+ G G VEA F M
Sbjct: 325 NTMISGLAMHGASVEAINEFRDM 347
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 110 bits (276), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 98/179 (54%), Gaps = 3/179 (1%)
Query: 30 LQQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHC- 88
L+Q H +I GL +D ++ FI + + Y+ +VF+ P T+L NT+I++
Sbjct: 31 LKQSHCYMIITGLNRDNLNVAKFIEACSNAGHLRYAYSVFTHQPCPNTYLHNTMIRALSL 90
Query: 89 --QNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEED 146
+ + ++ + ++ A + PDT+T+P V+K + G+ +HG + G +
Sbjct: 91 LDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSS 150
Query: 147 VFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGMP 205
V V T LI MY CG +GDARK+FD M ++V W A++ GY G++ EA+ L + MP
Sbjct: 151 VHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMP 209
Score = 63.9 bits (154), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 80/207 (38%), Gaps = 33/207 (15%)
Query: 31 QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTL------- 83
+QIH ++ G + +++ I + S + + +F +L +WN L
Sbjct: 136 RQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKV 195
Query: 84 --------------------------IKSHCQNSYFPATLSAFARMKANGSVPDTYTYPL 117
I + ++ + F RM PD T
Sbjct: 196 GEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLA 255
Query: 118 VIKACSAMCRGLEGKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRN 177
V+ AC+ + G+ + G+ V + ++IDMY K G I A VF+ ++ RN
Sbjct: 256 VLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERN 315
Query: 178 VVSWTAMVVGYVAAGDVVEAKKLFDGM 204
VV+WT ++ G G EA +F+ M
Sbjct: 316 VVTWTTIIAGLATHGHGAEALAMFNRM 342
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 110 bits (276), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 63/187 (33%), Positives = 96/187 (51%), Gaps = 2/187 (1%)
Query: 20 LLKACKRTEHLQQIHACIIQRGLEQDQFLISNFIS-LAHSLSTIAYSTTVFSRVLSP-TT 77
L+ C +QI +I R L +D +I+ ++ L S +YS+ + + S ++
Sbjct: 12 LISRCSSLRVFKQIQTQLITRDLLRDDLIINKVVTFLGKSADFASYSSVILHSIRSVLSS 71
Query: 78 FLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGS 137
F +NTL+ S+ T+ A+ +NG PD +T+P V KAC EGK +HG
Sbjct: 72 FSYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGKQIHGI 131
Query: 138 ALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEA 197
+ G +D++V SL+ YG CGE +A KVF M R+VVSWT ++ G+ G EA
Sbjct: 132 VTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKEA 191
Query: 198 KKLFDGM 204
F M
Sbjct: 192 LDTFSKM 198
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 91/181 (50%), Gaps = 13/181 (7%)
Query: 31 QQIHACIIQRG----LEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKS 86
+ IH I++R LE LI ++ ++ + VF + WN++I
Sbjct: 224 KGIHGLILKRASLISLETGNALIDMYVKCEQ----LSDAMRVFGELEKKDKVSWNSMISG 279
Query: 87 --HCQNSYFPATLSAFARMK-ANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGL 143
HC+ S + F+ M+ ++G PD + V+ AC+++ G+ VH L G+
Sbjct: 280 LVHCERS--KEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGI 337
Query: 144 EEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDG 203
+ D +GT+++DMY KCG I A ++F+ + +NV +W A++ G G +E+ + F+
Sbjct: 338 KWDTHIGTAIVDMYAKCGYIETALEIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEE 397
Query: 204 M 204
M
Sbjct: 398 M 398
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 83/189 (43%), Gaps = 8/189 (4%)
Query: 20 LLKACKRTEHL---QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPT 76
+ KAC + + +QIH + + G D ++ ++ + + VF +
Sbjct: 112 VFKACGKFSGIREGKQIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRD 171
Query: 77 TFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAM-CRGLEGKSVH 135
W +I + + L F++M P+ TY V+ + + C L GK +H
Sbjct: 172 VVSWTGIITGFTRTGLYKEALDTFSKMDVE---PNLATYVCVLVSSGRVGCLSL-GKGIH 227
Query: 136 GSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVV 195
G L+ + G +LIDMY KC ++ DA +VF + ++ VSW +M+ G V
Sbjct: 228 GLILKRASLISLETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSK 287
Query: 196 EAKKLFDGM 204
EA LF M
Sbjct: 288 EAIDLFSLM 296
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 109 bits (272), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 102/191 (53%), Gaps = 5/191 (2%)
Query: 18 ATLLKACK-RTEHLQ--QIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLS 74
A LL+ CK R E+ + +IHA + G +++L + L ++LS + + R L
Sbjct: 112 AVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLIL-YALSGDLQTAGILFRSLK 170
Query: 75 PTTFL-WNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKS 133
+ WN +I + Q L + M+ N VPD YT+ V +ACSA+ R GK
Sbjct: 171 IRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKR 230
Query: 134 VHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGD 193
H ++ ++ ++ V ++L+DMY KC D +VFD++S RNV++WT+++ GY G
Sbjct: 231 AHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGK 290
Query: 194 VVEAKKLFDGM 204
V E K F+ M
Sbjct: 291 VSEVLKCFEKM 301
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 73/155 (47%), Gaps = 8/155 (5%)
Query: 18 ATLLKAC---KRTEHLQQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLS 74
A++ +AC R EH ++ HA +I+R ++ + + S + + S+ + VF ++ +
Sbjct: 213 ASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLST 272
Query: 75 PTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACS---AMCRGLEG 131
W +LI + + L F +MK G P+ T+ +V+ AC+ + +G E
Sbjct: 273 RNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWE- 331
Query: 132 KSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDA 166
+ G+E + +++D G+ G + +A
Sbjct: 332 -HFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEA 365
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 109 bits (272), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 98/191 (51%), Gaps = 4/191 (2%)
Query: 18 ATLLKACKRTEHLQQ---IHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLS 74
++ +KAC ++ H +I G E + F+ S L + VF +
Sbjct: 167 SSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPE 226
Query: 75 PTTFLWNTLIKSHCQNSYFPATLSAFARM-KANGSVPDTYTYPLVIKACSAMCRGLEGKS 133
P W ++ + +N + L F M + G VPD T+ V+ AC + R +GK
Sbjct: 227 PDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKE 286
Query: 134 VHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGD 193
+HG + G+ +V V +SL+DMYGKCG + +AR+VF+ MS +N VSW+A++ GY G+
Sbjct: 287 IHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGE 346
Query: 194 VVEAKKLFDGM 204
+A ++F M
Sbjct: 347 HEKAIEIFREM 357
Score = 97.4 bits (241), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 96/190 (50%), Gaps = 7/190 (3%)
Query: 18 ATLLKAC---KRTEHLQQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLS 74
T+L AC +R + ++IH +I G+ + + S+ + + ++ + VF+ +
Sbjct: 269 GTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSK 328
Query: 75 PTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSV 134
+ W+ L+ +CQN + F M+ D Y + V+KAC+ + GK +
Sbjct: 329 KNSVSWSALLGGYCQNGEHEKAIEIFREMEEK----DLYCFGTVLKACAGLAAVRLGKEI 384
Query: 135 HGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDV 194
HG +R G +V V ++LID+YGK G I A +V+ +MS RN+++W AM+ G
Sbjct: 385 HGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRG 444
Query: 195 VEAKKLFDGM 204
EA F+ M
Sbjct: 445 EEAVSFFNDM 454
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 89/194 (45%), Gaps = 4/194 (2%)
Query: 18 ATLLKACKRT---EHLQQIHACIIQRGLEQDQFLISNFISLAHSLST-IAYSTTVFSRVL 73
A+LL+ C + H Q HA +++ GLE D+ + ++ +SL L + + VF
Sbjct: 65 ASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRETRRVFDGRF 124
Query: 74 SPTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKS 133
W +++ + L F M + G + +T +KACS + G+
Sbjct: 125 VKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGRC 184
Query: 134 VHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGD 193
HG + G E + F+ ++L +YG E DAR+VFD M +V+ WTA++ +
Sbjct: 185 FHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKNDL 244
Query: 194 VVEAKKLFDGMPPG 207
EA LF M G
Sbjct: 245 YEEALGLFYAMHRG 258
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 78/178 (43%), Gaps = 4/178 (2%)
Query: 18 ATLLKACKRTEHL---QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLS 74
T+LKAC + ++IH ++RG + + S I L I ++ V+S++
Sbjct: 366 GTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSI 425
Query: 75 PTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSV 134
WN ++ + QN +S F M G PD ++ ++ AC EG++
Sbjct: 426 RNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRNY 485
Query: 135 HG-SALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAA 191
A G++ + +ID+ G+ G +A + +R RN S +++G AA
Sbjct: 486 FVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLERAECRNDASLWGVLLGPCAA 543
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 108 bits (270), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/187 (33%), Positives = 98/187 (52%), Gaps = 4/187 (2%)
Query: 21 LKACKRTEHL---QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTT 77
LKAC + L ++IH C + + D +++ + + I + VF+ +
Sbjct: 149 LKACTELQDLDNGKKIH-CQLVKVPSFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNV 207
Query: 78 FLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGS 137
W ++I + +N L F RM+ N + + YTY +I AC+ + +GK HG
Sbjct: 208 VCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGC 267
Query: 138 ALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEA 197
++ G+E + TSL+DMY KCG+I +AR+VF+ S ++V WTAM+VGY G V EA
Sbjct: 268 LVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEA 327
Query: 198 KKLFDGM 204
LF M
Sbjct: 328 LSLFQKM 334
Score = 97.4 bits (241), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 90/185 (48%), Gaps = 1/185 (0%)
Query: 20 LLKACKRTEHLQQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFL 79
LL C + L+Q H + GL D + + +SL + VF ++ P +L
Sbjct: 50 LLSKCTNIDSLRQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYL 109
Query: 80 WNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSAL 139
W +++ +C N + + + +G D + +KAC+ + GK +H +
Sbjct: 110 WKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLV 169
Query: 140 RCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKK 199
+ ++V V T L+DMY KCGEI A KVF+ ++ RNVV WT+M+ GYV E
Sbjct: 170 KVPSFDNV-VLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLV 228
Query: 200 LFDGM 204
LF+ M
Sbjct: 229 LFNRM 233
Score = 91.7 bits (226), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 95/191 (49%), Gaps = 6/191 (3%)
Query: 18 ATLLKACKRTEHLQQ---IHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLS 74
TL+ AC + L Q H C+++ G+E L+++ + + I+ + VF+
Sbjct: 246 GTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSH 305
Query: 75 PTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLE-GKS 133
+W +I + N LS F +MK P+ T V+ C + LE G+S
Sbjct: 306 VDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGC-GLIENLELGRS 364
Query: 134 VHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGD 193
VHG +++ G+ D V +L+ MY KC + DA+ VF+ S +++V+W +++ G+ G
Sbjct: 365 VHGLSIKVGI-WDTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGS 423
Query: 194 VVEAKKLFDGM 204
+ EA LF M
Sbjct: 424 IHEALFLFHRM 434
Score = 87.4 bits (215), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 91/192 (47%), Gaps = 6/192 (3%)
Query: 18 ATLLKACKRTEHLQ---QIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLS 74
A++L C E+L+ +H I+ G+ D + + + + + VF
Sbjct: 347 ASVLSGCGLIENLELGRSVHGLSIKVGI-WDTNVANALVHMYAKCYQNRDAKYVFEMESE 405
Query: 75 PTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSV 134
WN++I QN L F RM + P+ T + AC+++ G S+
Sbjct: 406 KDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSL 465
Query: 135 HGSALRCGL--EEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAG 192
H +++ G V VGT+L+D Y KCG+ AR +FD + +N ++W+AM+ GY G
Sbjct: 466 HAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQG 525
Query: 193 DVVEAKKLFDGM 204
D + + +LF+ M
Sbjct: 526 DTIGSLELFEEM 537
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 108 bits (269), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 94/190 (49%), Gaps = 3/190 (1%)
Query: 18 ATLLKACK---RTEHLQQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLS 74
AT+ K C +Q+HA I+ G + D ++ S + + ++ + F +
Sbjct: 521 ATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPV 580
Query: 75 PTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSV 134
P W T+I +N F++M+ G +PD +T + KA S + +G+ +
Sbjct: 581 PDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQI 640
Query: 135 HGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDV 194
H +AL+ D FVGTSL+DMY KCG I DA +F R+ N+ +W AM+VG G+
Sbjct: 641 HANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEG 700
Query: 195 VEAKKLFDGM 204
E +LF M
Sbjct: 701 KETLQLFKQM 710
Score = 80.9 bits (198), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 86/172 (50%), Gaps = 2/172 (1%)
Query: 31 QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQN 90
QQ+H ++ GL+ + ++ I++ L ++ TVF + WN++I QN
Sbjct: 335 QQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQN 394
Query: 91 SYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLE-GKSVHGSALRCGLEEDVFV 149
+ F ++ G PD YT V+KA S++ GL K VH A++ D FV
Sbjct: 395 GLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFV 454
Query: 150 GTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLF 201
T+LID Y + + +A +F+R ++V+W AM+ GY + D + KLF
Sbjct: 455 STALIDAYSRNRCMKEAEILFER-HNFDLVAWNAMMAGYTQSHDGHKTLKLF 505
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 82/174 (47%), Gaps = 1/174 (0%)
Query: 31 QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQN 90
+Q+H I+ D F+ + I + + +F R + WN ++ + Q+
Sbjct: 437 KQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFER-HNFDLVAWNAMMAGYTQS 495
Query: 91 SYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVG 150
TL FA M G D +T V K C + +GK VH A++ G + D++V
Sbjct: 496 HDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVS 555
Query: 151 TSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
+ ++DMY KCG++ A+ FD + + V+WT M+ G + G+ A +F M
Sbjct: 556 SGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQM 609
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 82/172 (47%), Gaps = 5/172 (2%)
Query: 34 HACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQNSY- 92
HA I+ ++FLI+N IS+ ++ Y+ VF ++ WN+++ ++ Q+S
Sbjct: 62 HARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSEC 121
Query: 93 ----FPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVF 148
F ++ + T ++K C +S HG A + GL+ D F
Sbjct: 122 VVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEF 181
Query: 149 VGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKL 200
V +L+++Y K G++ + + +F+ M R+VV W M+ Y+ G EA L
Sbjct: 182 VAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDL 233
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 62/121 (51%)
Query: 81 NTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALR 140
N + + + + A L FA M + D T+ L++ + G+ VH AL+
Sbjct: 284 NKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALK 343
Query: 141 CGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKL 200
GL+ + V SLI+MY K + G AR VFD MS R+++SW +++ G G VEA L
Sbjct: 344 LGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCL 403
Query: 201 F 201
F
Sbjct: 404 F 404
Score = 53.9 bits (128), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%)
Query: 131 GKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVA 190
GK H L + F+ +LI MY KCG + AR+VFD+M R++VSW +++ Y
Sbjct: 58 GKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQ 117
Query: 191 AGDVV 195
+ + V
Sbjct: 118 SSECV 122
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 73/164 (44%), Gaps = 10/164 (6%)
Query: 18 ATLLKACK---RTEHLQQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLS 74
ATL KA E +QIHA ++ D F+ ++ + + +I + +F R+
Sbjct: 622 ATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEM 681
Query: 75 PTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEG--- 131
WN ++ Q+ TL F +MK+ G PD T+ V+ ACS E
Sbjct: 682 MNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKH 741
Query: 132 -KSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMS 174
+S+HG G++ ++ + L D G+ G + A + + MS
Sbjct: 742 MRSMHGDY---GIKPEIEHYSCLADALGRAGLVKQAENLIESMS 782
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 108 bits (269), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 88/172 (51%), Gaps = 3/172 (1%)
Query: 33 IHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQNSY 92
+H ++ G D F +++ + L I + +F + P W ++I +
Sbjct: 51 LHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGK 110
Query: 93 FPATLSAFARMKANGSVP-DTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVGT 151
LS F +M + VP + YT+ V KACSA+ GK++H GL ++ V +
Sbjct: 111 PQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSS 170
Query: 152 SLIDMYGKCGEIGDARKVFDRM--SGRNVVSWTAMVVGYVAAGDVVEAKKLF 201
SL+DMYGKC ++ AR+VFD M GRNVVSWT+M+ Y EA +LF
Sbjct: 171 SLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELF 222
Score = 84.0 bits (206), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 94/197 (47%), Gaps = 7/197 (3%)
Query: 18 ATLLKACK---RTEHLQQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLS 74
A++ KAC + + IHA + GL ++ + S+ + + + + + VF ++
Sbjct: 135 ASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCNDVETARRVFDSMIG 194
Query: 75 --PTTFLWNTLIKSHCQNSYFPATLSAFARMKA--NGSVPDTYTYPLVIKACSAMCRGLE 130
W ++I ++ QN+ + F A + + VI ACS++ R
Sbjct: 195 YGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALTSDRANQFMLASVISACSSLGRLQW 254
Query: 131 GKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVA 190
GK HG R G E + V TSL+DMY KCG + A K+F R+ +V+S+T+M++
Sbjct: 255 GKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCHSVISYTSMIMAKAK 314
Query: 191 AGDVVEAKKLFDGMPPG 207
G A KLFD M G
Sbjct: 315 HGLGEAAVKLFDEMVAG 331
Score = 53.5 bits (127), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 55/141 (39%), Gaps = 27/141 (19%)
Query: 73 LSPTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGK 132
L+P T +L +N +F AF K + S +T L
Sbjct: 11 LAPAT----SLFVPQYKNDFFHLKTKAFLVHKLSESTNAAFTNLL--------------- 51
Query: 133 SVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAG 192
H L+ G D F L+ Y K EI ARK+FD M NVVSWT+++ GY G
Sbjct: 52 --HTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMG 109
Query: 193 DVVEAKKLFDGM------PPG 207
A +F M PP
Sbjct: 110 KPQNALSMFQKMHEDRPVPPN 130
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 108 bits (269), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 99/189 (52%), Gaps = 4/189 (2%)
Query: 20 LLKACKRTEHLQQIHACIIQRGLEQDQFLISNFISLAHSLST---IAYSTTVFSRVLSPT 76
L + CK L+QIHA ++ GL + ++ I A SLS + Y+ +F + P
Sbjct: 18 LWQNCKNIRTLKQIHASMVVNGLMSNLSVVGELIYSA-SLSVPGALKYAHKLFDEIPKPD 76
Query: 77 TFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHG 136
+ N +++ Q+ T+S + M+ G PD YT+ V+KACS + G + HG
Sbjct: 77 VSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHG 136
Query: 137 SALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVE 196
+R G + +V +LI + CG++G A ++FD + + V+W++M GY G + E
Sbjct: 137 KVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDE 196
Query: 197 AKKLFDGMP 205
A +LFD MP
Sbjct: 197 AMRLFDEMP 205
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 58/125 (46%), Gaps = 5/125 (4%)
Query: 68 VFSRVLSPTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCR 127
+F R WN +I + Y L F M+ G PD T ++ AC+ +
Sbjct: 231 LFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGD 290
Query: 128 GLEGKSVHGSALRCG-LEEDVFVGT----SLIDMYGKCGEIGDARKVFDRMSGRNVVSWT 182
GK +H L + ++VGT +LIDMY KCG I A +VF + R++ +W
Sbjct: 291 LETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWN 350
Query: 183 AMVVG 187
++VG
Sbjct: 351 TLIVG 355
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 107 bits (268), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 104/191 (54%), Gaps = 5/191 (2%)
Query: 19 TLLKACKRTEHLQQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTF 78
+L+ ACK T L+ +HA I++RG+ + + + +S + L + YS ++F F
Sbjct: 34 SLIHACKDTASLRHVHAQILRRGVLSSR-VAAQLVSCSSLLKSPDYSLSIFRNSEERNPF 92
Query: 79 LWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSA 138
+ N LI+ +N+ F +++ F M G PD T+P V+K+ S + G+++H +
Sbjct: 93 VLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGFRWLGRALHAAT 152
Query: 139 LRCGLEEDVFVGTSLIDMYGKCGEIGDARKVF----DRMSGRNVVSWTAMVVGYVAAGDV 194
L+ ++ D FV SL+DMY K G++ A +VF DR+ +++ W ++ GY A D+
Sbjct: 153 LKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGYCRAKDM 212
Query: 195 VEAKKLFDGMP 205
A LF MP
Sbjct: 213 HMATTLFRSMP 223
Score = 88.2 bits (217), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 66/125 (52%)
Query: 80 WNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSAL 139
W TLI Q + +S + M G P+ YT V+ ACS G +HG L
Sbjct: 261 WTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYIL 320
Query: 140 RCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKK 199
G++ D +GT+L+DMY KCGE+ A VF M+ ++++SWTAM+ G+ G +A +
Sbjct: 321 DNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQ 380
Query: 200 LFDGM 204
F M
Sbjct: 381 CFRQM 385
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/172 (20%), Positives = 76/172 (44%), Gaps = 5/172 (2%)
Query: 18 ATLLKACKRTEHLQ---QIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLS 74
A +L AC ++ L +IH I+ G++ D+ + + + + + + TVFS +
Sbjct: 297 AAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNH 356
Query: 75 PTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSV 134
W +I+ + F + F +M +G PD + V+ AC G +
Sbjct: 357 KDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNF 416
Query: 135 HGSA-LRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMS-GRNVVSWTAM 184
S L +E + ++D+ G+ G++ +A ++ + M ++ +W A+
Sbjct: 417 FDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPINPDLTTWAAL 468
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 107 bits (267), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 54/140 (38%), Positives = 81/140 (57%), Gaps = 1/140 (0%)
Query: 66 TTVFSRVLSPT-TFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSA 124
TT+F+R + T F WN++I ++ L AF+ M+ P ++P IKACS+
Sbjct: 29 TTLFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSS 88
Query: 125 MCRGLEGKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAM 184
+ GK H A G + D+FV ++LI MY CG++ DARKVFD + RN+VSWT+M
Sbjct: 89 LFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSM 148
Query: 185 VVGYVAAGDVVEAKKLFDGM 204
+ GY G+ ++A LF +
Sbjct: 149 IRGYDLNGNALDAVSLFKDL 168
Score = 103 bits (256), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 100/193 (51%), Gaps = 8/193 (4%)
Query: 19 TLLKACKRTEH---LQQIHACIIQRGLEQDQFLISNFISLAHSLST---IAYSTTVFSRV 72
+++ AC R + IH+ +I+RG ++ + N + A++ +A + +F ++
Sbjct: 188 SVISACSRVPAKGLTESIHSFVIKRGFDR-GVSVGNTLLDAYAKGGEGGVAVARKIFDQI 246
Query: 73 LSPTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVP-DTYTYPLVIKACSAMCRGLEG 131
+ +N+++ + Q+ F R+ N V + T V+ A S G
Sbjct: 247 VDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIG 306
Query: 132 KSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAA 191
K +H +R GLE+DV VGTS+IDMY KCG + ARK FDRM +NV SWTAM+ GY
Sbjct: 307 KCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMH 366
Query: 192 GDVVEAKKLFDGM 204
G +A +LF M
Sbjct: 367 GHAAKALELFPAM 379
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 70/155 (45%), Gaps = 2/155 (1%)
Query: 33 IHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQNSY 92
IH +I+ GLE D + ++ I + + + F R+ + W +I + + +
Sbjct: 309 IHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGH 368
Query: 93 FPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEG-KSVHGSALRCGLEEDVFVGT 151
L F M +G P+ T+ V+ ACS +EG + + R G+E +
Sbjct: 369 AAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYG 428
Query: 152 SLIDMYGKCGEIGDARKVFDRMSGR-NVVSWTAMV 185
++D+ G+ G + A + RM + + + W++++
Sbjct: 429 CMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLL 463
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 107 bits (266), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 69/200 (34%), Positives = 103/200 (51%), Gaps = 17/200 (8%)
Query: 20 LLKACKRTEHLQQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTV----------- 68
+L +CK ++ + QIH +I+ G+ ++ L + + LA + S Y
Sbjct: 18 VLGSCKTSDDVNQIHGRLIKTGIIKNSNLTTRIV-LAFASSRRPYLADFARCVFHEYHVC 76
Query: 69 ---FSRVLSPTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAM 125
F V P FLWN +IKSH L M NG D ++ LV+KACS +
Sbjct: 77 SFSFGEVEDP--FLWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRL 134
Query: 126 CRGLEGKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMV 185
G +HG + GL D+F+ LI +Y KCG +G +R++FDRM R+ VS+ +M+
Sbjct: 135 GFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMI 194
Query: 186 VGYVAAGDVVEAKKLFDGMP 205
GYV G +V A++LFD MP
Sbjct: 195 DGYVKCGLIVSARELFDLMP 214
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 90/191 (47%), Gaps = 8/191 (4%)
Query: 18 ATLLKACKRTEHLQ---QIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLS 74
+ +LKAC R ++ QIH + + GL D FL + I L + S +F R+
Sbjct: 125 SLVLKACSRLGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPK 184
Query: 75 PTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSV 134
+ +N++I + + + F M + + ++ +I + G++ S
Sbjct: 185 RDSVSYNSMIDGYVKCGLIVSARELFDLMPME--MKNLISWNSMISGYAQTSDGVDIASK 242
Query: 135 HGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDV 194
+ + E+D+ S+ID Y K G I DA+ +FD M R+VV+W M+ GY G V
Sbjct: 243 LFADMP---EKDLISWNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFV 299
Query: 195 VEAKKLFDGMP 205
AK LFD MP
Sbjct: 300 HHAKTLFDQMP 310
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 65/135 (48%), Gaps = 1/135 (0%)
Query: 59 LSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQNSYFPATLSAFARM-KANGSVPDTYTYPL 117
L + ++ T+F ++ +N+++ + QN Y L F+ M K + +PD T +
Sbjct: 296 LGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVI 355
Query: 118 VIKACSAMCRGLEGKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRN 177
V+ A + + R + +H + +G +LIDMY KCG I A VF+ + ++
Sbjct: 356 VLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKS 415
Query: 178 VVSWTAMVVGYVAAG 192
+ W AM+ G G
Sbjct: 416 IDHWNAMIGGLAIHG 430
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 107 bits (266), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 81/154 (52%), Gaps = 1/154 (0%)
Query: 52 FISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSV-P 110
F+++ + + VF ++ F WN L+ + + YF + + RM G V P
Sbjct: 135 FLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKP 194
Query: 111 DTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVF 170
D YT+P V++ C + GK VH +R G E D+ V +LI MY KCG++ AR +F
Sbjct: 195 DVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLF 254
Query: 171 DRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
DRM R+++SW AM+ GY G E +LF M
Sbjct: 255 DRMPRRDIISWNAMISGYFENGMCHEGLELFFAM 288
Score = 81.3 bits (199), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 73/158 (46%)
Query: 31 QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQN 90
+++H +++ G E D +++ I++ + + +F R+ WN +I + +N
Sbjct: 216 KEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFEN 275
Query: 91 SYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVG 150
L F M+ PD T VI AC + G+ +H + G D+ V
Sbjct: 276 GMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVC 335
Query: 151 TSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGY 188
SL MY G +A K+F RM +++VSWT M+ GY
Sbjct: 336 NSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGY 373
Score = 70.1 bits (170), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 72/157 (45%)
Query: 31 QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQN 90
+ IHA +I G D + ++ + + + + +FSR+ W T+I + N
Sbjct: 317 RDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYN 376
Query: 91 SYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVG 150
+ + M + PD T V+ AC+ + G +H A++ L V V
Sbjct: 377 FLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVA 436
Query: 151 TSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVG 187
+LI+MY KC I A +F + +NV+SWT+++ G
Sbjct: 437 NNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAG 473
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 81/191 (42%), Gaps = 7/191 (3%)
Query: 18 ATLLKACKRTEHLQ---QIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLS 74
A +L AC L ++H I+ L + +N I++ I + +F +
Sbjct: 402 AAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPR 461
Query: 75 PTTFLWNTLIKS-HCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKS 133
W ++I N F A + F R P+ T + AC+ + + GK
Sbjct: 462 KNVISWTSIIAGLRLNNRCFEALI--FLRQMKMTLQPNAITLTAALAACARIGALMCGKE 519
Query: 134 VHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGD 193
+H LR G+ D F+ +L+DMY +CG + A F+ ++V SW ++ GY G
Sbjct: 520 IHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNSQK-KDVTSWNILLTGYSERGQ 578
Query: 194 VVEAKKLFDGM 204
+LFD M
Sbjct: 579 GSMVVELFDRM 589
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 49/117 (41%)
Query: 88 CQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDV 147
C N + M+ D + +++ C EG V+ AL V
Sbjct: 70 CANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGV 129
Query: 148 FVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
+G + + M+ + G + DA VF +MS RN+ SW +V GY G EA L+ M
Sbjct: 130 ELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRM 186
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 106 bits (265), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 99/189 (52%), Gaps = 3/189 (1%)
Query: 19 TLLKACKRTEHLQ---QIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSP 75
++ AC E L+ Q+H +I+ GL + F+ S+ I L + VF+ + +
Sbjct: 481 SVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTE 540
Query: 76 TTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVH 135
WN++I + +N+ ++ F M + G PD+ + V+ A S+ L+GKS+H
Sbjct: 541 NMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLH 600
Query: 136 GSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVV 195
G LR G+ D + +LIDMY KCG A +F +M +++++W M+ GY + GD +
Sbjct: 601 GYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCI 660
Query: 196 EAKKLFDGM 204
A LFD M
Sbjct: 661 TALSLFDEM 669
Score = 101 bits (251), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 98/187 (52%), Gaps = 3/187 (1%)
Query: 21 LKACKRTEHL---QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTT 77
L AC ++E+ +QIH +++ GL D ++ ++ +S+ + + TVFS V+
Sbjct: 279 LGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRL 338
Query: 78 FLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGS 137
+WN ++ ++ +N Y + L F M+ +PD++T VI CS + GKSVH
Sbjct: 339 EIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAE 398
Query: 138 ALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEA 197
+ ++ + ++L+ +Y KCG DA VF M +++V+W +++ G G EA
Sbjct: 399 LFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEA 458
Query: 198 KKLFDGM 204
K+F M
Sbjct: 459 LKVFGDM 465
Score = 91.7 bits (226), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 95/190 (50%), Gaps = 19/190 (10%)
Query: 19 TLLKACKRTEHL---QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVF------ 69
+LLKAC +L + IH ++ G D F+ ++ +++ + Y+ VF
Sbjct: 65 SLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQS 124
Query: 70 -SRVLSPTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMC-- 126
S V + +WN++I + + F + F RM G PD ++ +V+ S MC
Sbjct: 125 QSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVV---SVMCKE 181
Query: 127 ---RGLEGKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGR-NVVSWT 182
R EGK +HG LR L+ D F+ T+LIDMY K G DA +VF + + NVV W
Sbjct: 182 GNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWN 241
Query: 183 AMVVGYVAAG 192
M+VG+ +G
Sbjct: 242 VMIVGFGGSG 251
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 78/160 (48%), Gaps = 2/160 (1%)
Query: 31 QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQN 90
+ +HA + +R ++ + S ++L + VF + W +LI C+N
Sbjct: 393 KSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKN 452
Query: 91 SYFPATLSAFARMKANGSV--PDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVF 148
F L F MK + PD+ V AC+ + G VHGS ++ GL +VF
Sbjct: 453 GKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVF 512
Query: 149 VGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGY 188
VG+SLID+Y KCG A KVF MS N+V+W +M+ Y
Sbjct: 513 VGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCY 552
Score = 74.3 bits (181), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 79/180 (43%), Gaps = 1/180 (0%)
Query: 26 RTEHLQQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTF-LWNTLI 84
R E +QIH +++ L+ D FL + I + + VF + + LWN +I
Sbjct: 185 RREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMI 244
Query: 85 KSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLE 144
+ ++L + K N + ++ + ACS G+ +H ++ GL
Sbjct: 245 VGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLH 304
Query: 145 EDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
D +V TSL+ MY KCG +G+A VF + + + W AMV Y A LF M
Sbjct: 305 NDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFM 364
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 70/126 (55%), Gaps = 14/126 (11%)
Query: 73 LSPTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVP---DTYTYPLVIKACSAMCRGL 129
+SP + N+ I++ Q + L ++ K +GS P +T+P ++KACSA+
Sbjct: 22 ISPASI--NSGIRALIQKGEYLQALHLYS--KHDGSSPFWTSVFTFPSLLKACSALTNLS 77
Query: 130 EGKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFD-------RMSGRNVVSWT 182
GK++HGS + G D F+ TSL++MY KCG + A +VFD +S R+V W
Sbjct: 78 YGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWN 137
Query: 183 AMVVGY 188
+M+ GY
Sbjct: 138 SMIDGY 143
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 68/157 (43%), Gaps = 8/157 (5%)
Query: 18 ATLLKACKRTEHLQQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTT 77
A+LLK + +H ++ G+ D L + I + Y+ +F ++ +
Sbjct: 591 ASLLKG-------KSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSL 643
Query: 78 FLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGS 137
WN +I + + LS F MK G PD T+ +I AC+ EGK++
Sbjct: 644 ITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEF 703
Query: 138 ALR-CGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRM 173
+ G+E ++ +++D+ G+ G + +A M
Sbjct: 704 MKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAM 740
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/161 (36%), Positives = 86/161 (53%), Gaps = 1/161 (0%)
Query: 32 QIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQNS 91
Q HA I++ GL+ D F+ ++ IS S +++ +F W +I +N
Sbjct: 124 QFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNG 183
Query: 92 YFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCG-LEEDVFVG 150
+ F MK G + T V+KA + G+SVHG L G ++ DVF+G
Sbjct: 184 SASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIG 243
Query: 151 TSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAA 191
+SL+DMYGKC DA+KVFD M RNVV+WTA++ GYV +
Sbjct: 244 SSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQS 284
Score = 87.0 bits (214), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 95/190 (50%), Gaps = 4/190 (2%)
Query: 19 TLLKACKRTEHLQ---QIHACIIQRG-LEQDQFLISNFISLAHSLSTIAYSTTVFSRVLS 74
++LKA + E ++ +H ++ G ++ D F+ S+ + + S + VF + S
Sbjct: 209 SVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPS 268
Query: 75 PTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSV 134
W LI + Q+ F + F M + P+ T V+ AC+ + G+ V
Sbjct: 269 RNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRV 328
Query: 135 HGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDV 194
H ++ +E + GT+LID+Y KCG + +A VF+R+ +NV +WTAM+ G+ A G
Sbjct: 329 HCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYA 388
Query: 195 VEAKKLFDGM 204
+A LF M
Sbjct: 389 RDAFDLFYTM 398
Score = 77.0 bits (188), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 88/191 (46%), Gaps = 6/191 (3%)
Query: 19 TLLKACKRTEHLQQIHACIIQRGL---EQDQFLISNFISLAHSLSTIAYSTTVFSRVLSP 75
TLL HL+QIH ++ + +D FL + + Y+ + ++ +
Sbjct: 6 TLLDLPLHFLHLKQIHCLLLTSPIFYTRRDLFLSRLLRRCCTAATQFRYARRLLCQLQTL 65
Query: 76 TTFLWNTLIKSHCQNSYFPATLS--AFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKS 133
+ LW++LI LS A+ M+ NG +P +T+P ++KA + R
Sbjct: 66 SIQLWDSLIGHFSGGITLNRRLSFLAYRHMRRNGVIPSRHTFPPLLKAVFKL-RDSNPFQ 124
Query: 134 VHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGD 193
H ++ GL+ D FV SLI Y G A ++FD ++VV+WTAM+ G+V G
Sbjct: 125 FHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGS 184
Query: 194 VVEAKKLFDGM 204
EA F M
Sbjct: 185 ASEAMVYFVEM 195
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 106 bits (264), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 93/187 (49%), Gaps = 2/187 (1%)
Query: 21 LKACKRTEHLQQIHACIIQRGLEQDQFLISNFISLAHSLSTI--AYSTTVFSRVLSPTTF 78
L C ++QIH ++++GL+Q ++++ I L Y+ V V F
Sbjct: 56 LDDCINLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFRNPF 115
Query: 79 LWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSA 138
LW +I+ + F ++ + M+ P ++T+ ++KAC M G+ H
Sbjct: 116 LWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQT 175
Query: 139 LRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAK 198
R V+VG ++IDMY KC I ARKVFD M R+V+SWT ++ Y G++ A
Sbjct: 176 FRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAA 235
Query: 199 KLFDGMP 205
+LF+ +P
Sbjct: 236 ELFESLP 242
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 74/164 (45%), Gaps = 2/164 (1%)
Query: 43 EQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQNSYFPATLSAFAR 102
E+D + I+ + + + +F + + W ++ QN+ L F R
Sbjct: 212 ERDVISWTELIAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDR 271
Query: 103 MKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLE--EDVFVGTSLIDMYGKC 160
M+ +G D T I AC+ + A + G + V +G++LIDMY KC
Sbjct: 272 MEKSGIRADEVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKC 331
Query: 161 GEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
G + +A VF M+ +NV ++++M++G G EA LF M
Sbjct: 332 GNVEEAVNVFMSMNNKNVFTYSSMILGLATHGRAQEALHLFHYM 375
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 106 bits (264), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 95/187 (50%), Gaps = 4/187 (2%)
Query: 19 TLLKACKRT---EHLQQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSP 75
T L KR+ HL Q HA II G D L++ L I Y+ +F V P
Sbjct: 22 TYLDFFKRSTSISHLAQTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRP 81
Query: 76 TTFLWNTLIKSHCQNSYFPATLSAFARMKANGSV-PDTYTYPLVIKACSAMCRGLEGKSV 134
FL+N L++ N ++LS FA ++ + + P++ TY I A S G+ +
Sbjct: 82 DVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVI 141
Query: 135 HGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDV 194
HG A+ G + ++ +G++++ MY K + DARKVFDRM ++ + W M+ GY
Sbjct: 142 HGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMY 201
Query: 195 VEAKKLF 201
VE+ ++F
Sbjct: 202 VESIQVF 208
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 85/170 (50%), Gaps = 16/170 (9%)
Query: 48 LISNFISLAHSLSTIAYSTTVFSRV-----------LSPTTFL--WNTLIKSHCQNSYFP 94
L SNF+S A S+ST TTV+S++ SP L WN +I + QN
Sbjct: 346 LKSNFLSHA-SVSTAL--TTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTE 402
Query: 95 ATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVGTSLI 154
+S F M+ + P+ T ++ AC+ + GK VH E ++V T+LI
Sbjct: 403 DAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALI 462
Query: 155 DMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
MY KCG I +AR++FD M+ +N V+W M+ GY G EA +F M
Sbjct: 463 GMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEM 512
Score = 70.5 bits (171), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 76/173 (43%), Gaps = 3/173 (1%)
Query: 32 QIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQNS 91
QIH+ + G ++++ FISL I + +F P +N +I + N
Sbjct: 242 QIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNG 301
Query: 92 YFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVGT 151
+LS F + +G+ + T ++ + + ++HG L+ V T
Sbjct: 302 ETELSLSLFKELMLSGARLRSSTLVSLVPVSGHL---MLIYAIHGYCLKSNFLSHASVST 358
Query: 152 SLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
+L +Y K EI ARK+FD +++ SW AM+ GY G +A LF M
Sbjct: 359 ALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREM 411
Score = 68.2 bits (165), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 78/173 (45%), Gaps = 1/173 (0%)
Query: 33 IHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQNSY 92
IH + G + + L SN + + + + VF R+ T LWNT+I + +N
Sbjct: 141 IHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEM 200
Query: 93 FPATLSAFARM-KANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVGT 151
+ ++ F + + + DT T ++ A + + G +H A + G +V T
Sbjct: 201 YVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLT 260
Query: 152 SLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
I +Y KCG+I +F ++V++ AM+ GY + G+ + LF +
Sbjct: 261 GFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKEL 313
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 106 bits (264), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/175 (34%), Positives = 90/175 (51%), Gaps = 2/175 (1%)
Query: 31 QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQN 90
+Q+HA +++G E + F+I+ +++ L +A S + WNT++ S CQN
Sbjct: 222 KQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQN 280
Query: 91 SYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCG-LEEDVFV 149
L M G PD +T V+ ACS + GK +H AL+ G L+E+ FV
Sbjct: 281 EQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFV 340
Query: 150 GTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
G++L+DMY C ++ R+VFD M R + W AM+ GY EA LF GM
Sbjct: 341 GSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGM 395
Score = 100 bits (250), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 106/201 (52%), Gaps = 14/201 (6%)
Query: 18 ATLLKACKRT---EHLQQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLS 74
A ++ AC R+ + IH +++RGL++D+F+ + + + L I + +F ++
Sbjct: 409 AGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMED 468
Query: 75 PTTFLWNTLIKSHCQNSYFPATLSAFARMK------ANGSV-----PDTYTYPLVIKACS 123
WNT+I + + + L +M+ + G+ P++ T ++ +C+
Sbjct: 469 RDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCA 528
Query: 124 AMCRGLEGKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTA 183
A+ +GK +H A++ L DV VG++L+DMY KCG + +RKVFD++ +NV++W
Sbjct: 529 ALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNV 588
Query: 184 MVVGYVAAGDVVEAKKLFDGM 204
+++ Y G+ EA L M
Sbjct: 589 IIMAYGMHGNGQEAIDLLRMM 609
Score = 88.2 bits (217), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 93/177 (52%), Gaps = 5/177 (2%)
Query: 18 ATLLKACKRTEHL---QQIHACIIQRG-LEQDQFLISNFISLAHSLSTIAYSTTVFSRVL 73
+++L AC E L +++HA ++ G L+++ F+ S + + + + VF +
Sbjct: 306 SSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMF 365
Query: 74 SPTTFLWNTLIKSHCQNSYFPATLSAFARMKAN-GSVPDTYTYPLVIKACSAMCRGLEGK 132
LWN +I + QN + L F M+ + G + ++ T V+ AC +
Sbjct: 366 DRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKE 425
Query: 133 SVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYV 189
++HG ++ GL+ D FV +L+DMY + G+I A ++F +M R++V+W M+ GYV
Sbjct: 426 AIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYV 482
Score = 77.8 bits (190), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 92/199 (46%), Gaps = 13/199 (6%)
Query: 20 LLKACKRTEHLQ---QIHACIIQRGLEQDQFLISN-FISLAHSLSTIAYSTTVFSRVLSP 75
LLKA + ++ QIHA + + G D ++N ++L VF R+
Sbjct: 103 LLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISER 162
Query: 76 TTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACS--AMCRGL-EGK 132
WN+LI S C + L AF M P ++T V+ ACS M GL GK
Sbjct: 163 NQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGK 222
Query: 133 SVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAG 192
VH LR G E + F+ +L+ MYGK G++ ++ + GR++V+W ++
Sbjct: 223 QVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNE 281
Query: 193 DVVEA-----KKLFDGMPP 206
++EA + + +G+ P
Sbjct: 282 QLLEALEYLREMVLEGVEP 300
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 69/128 (53%), Gaps = 4/128 (3%)
Query: 60 STIAYSTTVF-SRVLSPTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLV 118
S ++ + ++F S+ SP W L++S +++ + + M G PD Y +P +
Sbjct: 46 SAVSGAPSIFISQSRSPE--WWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPAL 103
Query: 119 IKACSAMCRGLEGKSVHGSALRCGLEED-VFVGTSLIDMYGKCGEIGDARKVFDRMSGRN 177
+KA + + GK +H + G D V V +L+++Y KCG+ G KVFDR+S RN
Sbjct: 104 LKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERN 163
Query: 178 VVSWTAMV 185
VSW +++
Sbjct: 164 QVSWNSLI 171
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 106 bits (264), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 96/173 (55%)
Query: 32 QIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQNS 91
Q HA I++ G + D ++ + I+ + + + V + PT + +++LI + +
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAK 95
Query: 92 YFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVGT 151
F ++ F+RM ++G +PD++ P + K C+ + GK +H + GL+ D FV
Sbjct: 96 LFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQG 155
Query: 152 SLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
S+ MY +CG +GDARKVFDRMS ++VV+ +A++ Y G + E ++ M
Sbjct: 156 SMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEM 208
Score = 85.1 bits (209), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 67/125 (53%)
Query: 80 WNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSAL 139
W ++I QN L F M+ G P+ T P ++ AC + G+S HG A+
Sbjct: 356 WTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAV 415
Query: 140 RCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKK 199
R L ++V VG++LIDMY KCG I ++ VF+ M +N+V W +++ G+ G E
Sbjct: 416 RVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMS 475
Query: 200 LFDGM 204
+F+ +
Sbjct: 476 IFESL 480
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 63/160 (39%), Gaps = 35/160 (21%)
Query: 80 WNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSAL 139
WN ++ ++ Y + F ++ G PD T V+ + G+ +HG +
Sbjct: 220 WNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVI 279
Query: 140 RCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMS------------------------- 174
+ GL +D V +++IDMYGK G + +F++
Sbjct: 280 KQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALE 339
Query: 175 ----------GRNVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
NVVSWT+++ G G +EA +LF M
Sbjct: 340 MFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREM 379
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 106 bits (264), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 52/137 (37%), Positives = 77/137 (56%), Gaps = 1/137 (0%)
Query: 68 VFSRVLSPTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCR 127
VF LS + WNT+I +N + A F M PD+YTY V+ AC+++ +
Sbjct: 207 VFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACASLEK 266
Query: 128 GLEGKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVG 187
GK V ++CG EDVFV T+++D+Y KCG + +A +VF R+ +VVSWT M+ G
Sbjct: 267 LRFGKVVQARVIKCG-AEDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSG 325
Query: 188 YVAAGDVVEAKKLFDGM 204
Y + D A ++F M
Sbjct: 326 YTKSNDAFSALEIFKEM 342
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 89/174 (51%)
Query: 31 QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQN 90
+Q+H ++ GL D + S+ +L ++ S +F + W ++I +
Sbjct: 470 KQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEY 529
Query: 91 SYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVG 150
Y + F+ M +G+ PD T V+ CS+ GK +HG LR G+++ + +G
Sbjct: 530 GYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLG 589
Query: 151 TSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
++L++MY KCG + AR+V+DR+ + VS ++++ GY G + + LF M
Sbjct: 590 SALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDM 643
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 88/194 (45%), Gaps = 15/194 (7%)
Query: 19 TLLKACKRTEHL---QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLS- 74
+++ AC R + Q+HA + + G D + + IS+ I S VF +
Sbjct: 356 SVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDI 415
Query: 75 PTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAM----CRGLE 130
+ N +I S Q+ + F RM G D ++ CS + C L
Sbjct: 416 QRQNIVNVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFS------VCSLLSVLDCLNL- 468
Query: 131 GKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVA 190
GK VHG L+ GL D+ VG+SL +Y KCG + ++ K+F + ++ W +M+ G+
Sbjct: 469 GKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNE 528
Query: 191 AGDVVEAKKLFDGM 204
G + EA LF M
Sbjct: 529 YGYLREAIGLFSEM 542
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 89/190 (46%), Gaps = 3/190 (1%)
Query: 18 ATLLKACKRTEHL---QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLS 74
A +L C L ++IH ++ G+++ L S +++ ++ + V+ R+
Sbjct: 555 AAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPE 614
Query: 75 PTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSV 134
++LI + Q+ F M +G D++ ++KA + G V
Sbjct: 615 LDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESSLGAQV 674
Query: 135 HGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDV 194
H + GL + VG+SL+ MY K G I D K F +++G ++++WTA++ Y G
Sbjct: 675 HAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIASYAQHGKA 734
Query: 195 VEAKKLFDGM 204
EA ++++ M
Sbjct: 735 NEALQVYNLM 744
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 90/193 (46%), Gaps = 9/193 (4%)
Query: 18 ATLLKACKRTEHL---QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLS 74
+++L AC E L + + A +I+ G E D F+ + + L +A + VFSR+ +
Sbjct: 255 SSVLAACASLEKLRFGKVVQARVIKCGAE-DVFVCTAIVDLYAKCGHMAEAMEVFSRIPN 313
Query: 75 PTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSV 134
P+ W ++ + +++ + L F M+ +G + T VI AC E V
Sbjct: 314 PSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQV 373
Query: 135 HGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVF---DRMSGRNVVSWTAMVVGYVAA 191
H + G D V +LI MY K G+I + +VF D + +N+V+ M+ + +
Sbjct: 374 HAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIVN--VMITSFSQS 431
Query: 192 GDVVEAKKLFDGM 204
+A +LF M
Sbjct: 432 KKPGKAIRLFTRM 444
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 81/183 (44%), Gaps = 3/183 (1%)
Query: 26 RTEHLQQIHACIIQRGLEQ-DQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLI 84
RT + Q H +++R L D FL + +S + ++A + +F + P N +I
Sbjct: 65 RTTKILQAH--LLRRYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMI 122
Query: 85 KSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLE 144
+ Q+ F +L F++M G + +Y VI ACSA+ L + V ++ G
Sbjct: 123 SGYKQHRLFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYF 182
Query: 145 EDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
V ++LID++ K DA KVF NV W ++ G + + LF M
Sbjct: 183 FYEVVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEM 242
Query: 205 PPG 207
G
Sbjct: 243 CVG 245
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 80/182 (43%), Gaps = 10/182 (5%)
Query: 32 QIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQNS 91
Q+HA I + GL + + S+ +++ +I FS++ P W LI S+ Q+
Sbjct: 673 QVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIASYAQHG 732
Query: 92 YFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGL-EGKSVHGSAL--RCGLEEDVF 148
L + MK G PD T+ V+ ACS GL E H +++ G+E +
Sbjct: 733 KANEALQVYNLMKEKGFKPDKVTFVGVLSACSH--GGLVEESYFHLNSMVKDYGIEPENR 790
Query: 149 VGTSLIDMYGKCGEIGDARKVFDRMSGR-NVVSWTAMVVGYVAAGDV----VEAKKLFDG 203
++D G+ G + +A + M + + + W ++ G+V V AKK +
Sbjct: 791 HYVCMVDALGRSGRLREAESFINNMHIKPDALVWGTLLAACKIHGEVELGKVAAKKAIEL 850
Query: 204 MP 205
P
Sbjct: 851 EP 852
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 105 bits (263), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 89/177 (50%), Gaps = 4/177 (2%)
Query: 32 QIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQNS 91
++H I+ G +QD FL + I + L ++ Y+ VF + T ++WN L ++
Sbjct: 98 RVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAG 157
Query: 92 YFPATLSAFARMKANGSVPDTYTYPLVIKACSA----MCRGLEGKSVHGSALRCGLEEDV 147
+ L + +M G D +TY V+KAC A + ++GK +H R G V
Sbjct: 158 HGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHV 217
Query: 148 FVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
++ T+L+DMY + G + A VF M RNVVSW+AM+ Y G EA + F M
Sbjct: 218 YIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREM 274
Score = 99.4 bits (246), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 105/194 (54%), Gaps = 9/194 (4%)
Query: 20 LLKACKRTE----HL---QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRV 72
+LKAC +E HL ++IHA + +RG ++++ + + + Y++ VF +
Sbjct: 184 VLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGM 243
Query: 73 LSPTTFLWNTLIKSHCQNSYFPATLSAFARM--KANGSVPDTYTYPLVIKACSAMCRGLE 130
W+ +I + +N L F M + S P++ T V++AC+++ +
Sbjct: 244 PVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQ 303
Query: 131 GKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVA 190
GK +HG LR GL+ + V ++L+ MYG+CG++ ++VFDRM R+VVSW +++ Y
Sbjct: 304 GKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGV 363
Query: 191 AGDVVEAKKLFDGM 204
G +A ++F+ M
Sbjct: 364 HGYGKKAIQIFEEM 377
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 75/159 (47%), Gaps = 4/159 (2%)
Query: 19 TLLKACKRTEHLQQ---IHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSP 75
++L+AC L+Q IH I++RGL+ +IS +++ + VF R+
Sbjct: 290 SVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDR 349
Query: 76 TTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVH 135
WN+LI S+ + Y + F M ANG+ P T+ V+ ACS EGK +
Sbjct: 350 DVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLF 409
Query: 136 GSALR-CGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRM 173
+ R G++ + ++D+ G+ + +A K+ M
Sbjct: 410 ETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDM 448
Score = 61.2 bits (147), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 54/124 (43%), Gaps = 4/124 (3%)
Query: 81 NTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALR 140
N LI+S C+ L R+ + S P TY L+I C + VH L
Sbjct: 50 NQLIQSLCKE----GKLKQAIRVLSQESSPSQQTYELLILCCGHRSSLSDALRVHRHILD 105
Query: 141 CGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKL 200
G ++D F+ T LI MY G + ARKVFD+ R + W A+ AG E L
Sbjct: 106 NGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGL 165
Query: 201 FDGM 204
+ M
Sbjct: 166 YWKM 169
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 105 bits (262), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 89/185 (48%), Gaps = 9/185 (4%)
Query: 29 HLQQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHC 88
H+ Q+HA I+ ++ D FL S IS + VF + F +N L+ ++
Sbjct: 40 HVLQLHARIVVFSIKPDNFLASKLISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYT 99
Query: 89 QNSYFPATLSAFAR------MKANGSVPDTYTYPLVIKA---CSAMCRGLEGKSVHGSAL 139
+ S F ++ + PD+ + V+KA C G + VHG +
Sbjct: 100 SREMYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVI 159
Query: 140 RCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKK 199
R G + DVFVG +I Y KC I ARKVFD MS R+VVSW +M+ GY +G + KK
Sbjct: 160 RGGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKK 219
Query: 200 LFDGM 204
++ M
Sbjct: 220 MYKAM 224
Score = 88.6 bits (218), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 85/164 (51%), Gaps = 4/164 (2%)
Query: 43 EQDQFLISNFIS--LAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQNSYFPATLSAF 100
E+D IS +AH L + + +FS + S WN +I QN++ +++F
Sbjct: 297 EKDSVTYGAIISGYMAHGL--VKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVINSF 354
Query: 101 ARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVGTSLIDMYGKC 160
M GS P+T T ++ + + GK +H A+R G + +++V TS+ID Y K
Sbjct: 355 REMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKL 414
Query: 161 GEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
G + A++VFD R++++WTA++ Y GD A LFD M
Sbjct: 415 GFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQM 458
Score = 80.1 bits (196), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 83/176 (47%), Gaps = 1/176 (0%)
Query: 31 QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQN 90
+Q+H +I+ G + D F+ + I+ I + VF + WN++I + Q+
Sbjct: 152 RQVHGFVIRGGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQS 211
Query: 91 SYFPATLSAFARMKANGSV-PDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFV 149
F + M A P+ T V +AC + G VH + ++ D+ +
Sbjct: 212 GSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSL 271
Query: 150 GTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGMP 205
++I Y KCG + AR +FD MS ++ V++ A++ GY+A G V EA LF M
Sbjct: 272 CNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEME 327
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 105 bits (261), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 91/173 (52%), Gaps = 6/173 (3%)
Query: 32 QIHACIIQRGLEQDQFLISNFISLAHSLSTIAY-STTVFSRVLSPTTFLWNTLIKSHC-- 88
Q+H +++ GL + +N I+ +S S + + S F SP C
Sbjct: 36 QLHGYVVKSGLSLIPLVANNLINF-YSKSQLPFDSRRAFED--SPQKSSTTWSSIISCFA 92
Query: 89 QNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVF 148
QN +L +M A PD + P K+C+ + R G+SVH +++ G + DVF
Sbjct: 93 QNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVF 152
Query: 149 VGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLF 201
VG+SL+DMY KCGEI ARK+FD M RNVV+W+ M+ GY G+ EA LF
Sbjct: 153 VGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLF 205
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 76/174 (43%)
Query: 31 QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQN 90
+ +H ++ G + D F+ S+ + + I Y+ +F + W+ ++ + Q
Sbjct: 136 RSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQM 195
Query: 91 SYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVG 150
L F + Y++ VI C+ G+ +HG +++ + FVG
Sbjct: 196 GENEEALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVG 255
Query: 151 TSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
+SL+ +Y KCG A +VF+ + +N+ W AM+ Y + +LF M
Sbjct: 256 SSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRM 309
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 51/106 (48%)
Query: 68 VFSRVLSPTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCR 127
VF+ V +WN ++K++ Q+S+ + F RMK +G P+ T+ V+ ACS
Sbjct: 274 VFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGL 333
Query: 128 GLEGKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRM 173
EG+ +E SL+DM G+ G + +A +V M
Sbjct: 334 VDEGRYYFDQMKESRIEPTDKHYASLVDMLGRAGRLQEALEVITNM 379
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 105 bits (261), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 98/172 (56%), Gaps = 4/172 (2%)
Query: 37 IIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFS-RVLSPTTFLWNTLIKSHCQNSYFPA 95
+++ +E + + + F+ ++ S I Y+ +F R +FL N++IK++ + +P
Sbjct: 1 MLRHAIETNVQIFTKFLVISASAVGIGYARKLFDQRPQRDDSFLSNSMIKAYLETRQYPD 60
Query: 96 TLSAFARMKANGS-VPDTYTYPLVIKACS-AMCRGLEGKSVHGSALRCGLEEDVFVGTSL 153
+ + + ++ PD +T+ + K+CS +MC +G +H R G D++V T +
Sbjct: 61 SFALYRDLRKETCFAPDNFTFTTLTKSCSLSMCV-YQGLQLHSQIWRFGFCADMYVSTGV 119
Query: 154 IDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGMP 205
+DMY K G++G AR FD M R+ VSWTA++ GY+ G++ A KLFD MP
Sbjct: 120 VDMYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMP 171
Score = 83.6 bits (205), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 72/145 (49%), Gaps = 1/145 (0%)
Query: 58 SLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSV-PDTYTYP 116
++ I + +F + WNT+I +CQN + F M+A S+ PD T
Sbjct: 219 NIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTIL 278
Query: 117 LVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGR 176
V+ A S G+ H R L++ V V T+++DMY KCGEI A+++FD M +
Sbjct: 279 SVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEK 338
Query: 177 NVVSWTAMVVGYVAAGDVVEAKKLF 201
V SW AM+ GY G+ A LF
Sbjct: 339 QVASWNAMIHGYALNGNARAALDLF 363
Score = 60.5 bits (145), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 41/61 (67%)
Query: 145 EDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
+DV + +++D + K G++ AR++FD M+ + V++WT M+ GY D+ A+KLFD M
Sbjct: 174 KDVVIYNAMMDGFVKSGDMTSARRLFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAM 233
Query: 205 P 205
P
Sbjct: 234 P 234
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 68/176 (38%), Gaps = 13/176 (7%)
Query: 32 QIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQNS 91
Q+H+ I + G D ++ + + + + + F + + W LI + +
Sbjct: 99 QLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCG 158
Query: 92 YFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLE---EDVF 148
F +M V D Y +AM G SA R E + V
Sbjct: 159 ELDLASKLFDQMP---HVKDVVIY-------NAMMDGFVKSGDMTSARRLFDEMTHKTVI 208
Query: 149 VGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
T++I Y +I ARK+FD M RN+VSW M+ GY E +LF M
Sbjct: 209 TWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEM 264
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 104 bits (260), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 98/195 (50%), Gaps = 8/195 (4%)
Query: 20 LLKACKRTEHLQ---QIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPT 76
+L AC +L+ Q+H+ +++ G E+ F + + + +A + F +
Sbjct: 328 VLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERD 387
Query: 77 TFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHG 136
LW +LI + QNS L + RMK G +P+ T V+KACS++ GK VHG
Sbjct: 388 VALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHG 447
Query: 137 SALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVE 196
++ G +V +G++L MY KCG + D VF R ++VVSW AM+ G G E
Sbjct: 448 HTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDE 507
Query: 197 AKKLF-----DGMPP 206
A +LF +GM P
Sbjct: 508 ALELFEEMLAEGMEP 522
Score = 101 bits (251), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 88/174 (50%)
Query: 31 QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQN 90
+QIH I+ GL L + +++ ++ + +F + W+ ++ + QN
Sbjct: 241 RQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQN 300
Query: 91 SYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVG 150
+ F+RM + G P YT V+ ACS +C EGK +H L+ G E +F
Sbjct: 301 GESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFAT 360
Query: 151 TSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
T+L+DMY K G + DARK FD + R+V WT+++ GYV D EA L+ M
Sbjct: 361 TALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRM 414
Score = 91.7 bits (226), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 97/199 (48%), Gaps = 19/199 (9%)
Query: 18 ATLLKACKRTEHLQQ--------IHACIIQRGLE---QDQFLISNFISLAHSLSTIAYST 66
+TLLK K T H QQ +H II+ G Q ++ NF + +A +
Sbjct: 15 STLLK--KLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYA---KCGKLAKAH 69
Query: 67 TVFSRVLSPTTFLWNTLIKSHCQNSYFPAT---LSAFARMKANGSVPDTYTYPLVIKACS 123
++F+ ++ WN+LI + QN ++ + F M+A +P+ YT + KA S
Sbjct: 70 SIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAES 129
Query: 124 AMCRGLEGKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTA 183
++ G+ H ++ D++V TSL+ MY K G + D KVF M RN +W+
Sbjct: 130 SLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWST 189
Query: 184 MVVGYVAAGDVVEAKKLFD 202
MV GY G V EA K+F+
Sbjct: 190 MVSGYATRGRVEEAIKVFN 208
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 85/177 (48%), Gaps = 4/177 (2%)
Query: 31 QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQN 90
+Q HA +++ D ++ ++ + + + VF+ + T+ W+T++ +
Sbjct: 138 RQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATR 197
Query: 91 SYFPATLSAFA---RMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDV 147
+ F R K GS D Y + V+ + +A G+ +H ++ GL V
Sbjct: 198 GRVEEAIKVFNLFLREKEEGSDSD-YVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFV 256
Query: 148 FVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
+ +L+ MY KC + +A K+FD RN ++W+AMV GY G+ +EA KLF M
Sbjct: 257 ALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRM 313
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 68/160 (42%), Gaps = 8/160 (5%)
Query: 18 ATLLKACKRTEHLQ---QIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLS 74
A++LKAC L+ Q+H I+ G + + S ++ ++ VF R +
Sbjct: 427 ASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPN 486
Query: 75 PTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKS- 133
WN +I N L F M A G PD T+ +I ACS +G +
Sbjct: 487 KDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSH--KGFVERGW 544
Query: 134 --VHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFD 171
+ + + GL+ V ++D+ + G++ +A++ +
Sbjct: 545 FYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIE 584
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 104 bits (260), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 101/201 (50%), Gaps = 12/201 (5%)
Query: 19 TLLKACKRTEHL---QQIHACIIQRGLE-QDQFLISNFISLAHSLSTIAYSTTVFSRVLS 74
+LL+ C R+ +L Q IH +++R L ++ N L S + + + VF +
Sbjct: 4 SLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEIPH 63
Query: 75 P--TTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGK 132
P W+ +I+++ N + L + +M +G P YTYP V+KAC+ + +GK
Sbjct: 64 PRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDGK 123
Query: 133 SVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAG 192
+H D++V T+L+D Y KCGE+ A KVFD M R++V+W AM+ G+
Sbjct: 124 LIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHC 183
Query: 193 DVVEAKKLF------DGMPPG 207
+ + LF DG+ P
Sbjct: 184 CLTDVIGLFLDMRRIDGLSPN 204
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 86/188 (45%), Gaps = 3/188 (1%)
Query: 20 LLKACKRTEHL---QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPT 76
+L C R L + +H ++ G D + + IS ++ + FS +
Sbjct: 314 ILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKD 373
Query: 77 TFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHG 136
+N+LI N + F M+ +G PD T V+ ACS + G S HG
Sbjct: 374 VISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHG 433
Query: 137 SALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVE 196
+ G + + +L+DMY KCG++ A++VFD M R++VSW M+ G+ G E
Sbjct: 434 YCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKE 493
Query: 197 AKKLFDGM 204
A LF+ M
Sbjct: 494 ALSLFNSM 501
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 83/189 (43%), Gaps = 4/189 (2%)
Query: 20 LLKAC---KRTEHLQQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPT 76
+LKAC + + + IH+ + D ++ + + + + VF +
Sbjct: 109 VLKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRD 168
Query: 77 TFLWNTLIKSHCQNSYFPATLSAFARMK-ANGSVPDTYTYPLVIKACSAMCRGLEGKSVH 135
WN +I + + F M+ +G P+ T + A EGK+VH
Sbjct: 169 MVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVH 228
Query: 136 GSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVV 195
G R G D+ V T ++D+Y K I AR+VFD +N V+W+AM+ GYV +
Sbjct: 229 GYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIK 288
Query: 196 EAKKLFDGM 204
EA ++F M
Sbjct: 289 EAGEVFFQM 297
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 73/176 (41%), Gaps = 2/176 (1%)
Query: 31 QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQN 90
+ +H + G D + + + + I Y+ VF W+ +I + +N
Sbjct: 225 KAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVEN 284
Query: 91 SYFPATLSAFARMKANGSVP--DTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVF 148
F +M N +V L++ C+ G+ VH A++ G D+
Sbjct: 285 EMIKEAGEVFFQMLVNDNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLT 344
Query: 149 VGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
V ++I Y K G + DA + F + ++V+S+ +++ G V E+ +LF M
Sbjct: 345 VQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEM 400
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 104 bits (259), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 98/189 (51%), Gaps = 3/189 (1%)
Query: 19 TLLKACKRTEHLQQ---IHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSP 75
TLLK C + L Q +HA I+Q D + + +++ ++ + VF ++
Sbjct: 65 TLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQR 124
Query: 76 TTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVH 135
W TLI + Q+ L F +M G P+ +T VIKA +A RG G +H
Sbjct: 125 DFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLH 184
Query: 136 GSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVV 195
G ++CG + +V VG++L+D+Y + G + DA+ VFD + RN VSW A++ G+
Sbjct: 185 GFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTE 244
Query: 196 EAKKLFDGM 204
+A +LF GM
Sbjct: 245 KALELFQGM 253
Score = 97.4 bits (241), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 85/174 (48%)
Query: 31 QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQN 90
Q+H ++ G + + + S + L + + VF + S WN LI H +
Sbjct: 181 HQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARR 240
Query: 91 SYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVG 150
S L F M +G P ++Y + ACS+ +GK VH ++ G + F G
Sbjct: 241 SGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAG 300
Query: 151 TSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
+L+DMY K G I DARK+FDR++ R+VVSW +++ Y G EA F+ M
Sbjct: 301 NTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEM 354
Score = 70.9 bits (172), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 53/94 (56%)
Query: 111 DTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVF 170
D Y ++K C+ ++G+ VH L+ D+ +G +L++MY KCG + +ARKVF
Sbjct: 59 DRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVF 118
Query: 171 DRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
++M R+ V+WT ++ GY +A F+ M
Sbjct: 119 EKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQM 152
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 74/159 (46%), Gaps = 3/159 (1%)
Query: 18 ATLLKACKRTEHLQQ---IHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLS 74
A+L AC T L+Q +HA +I+ G + F + + + +I + +F R+
Sbjct: 266 ASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAK 325
Query: 75 PTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSV 134
WN+L+ ++ Q+ + + F M+ G P+ ++ V+ ACS EG
Sbjct: 326 RDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHY 385
Query: 135 HGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRM 173
+ + G+ + + +++D+ G+ G++ A + + M
Sbjct: 386 YELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEM 424
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 104 bits (259), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 102/187 (54%), Gaps = 2/187 (1%)
Query: 20 LLKACKRTEHLQQIHACIIQRGLEQDQFL--ISNFISLAHSLSTIAYSTTVFSRVLSPTT 77
L+ C L QI A I+ +E F+ + NF + + + S+++Y+ +F + P
Sbjct: 35 LISKCNSLRELMQIQAYAIKSHIEDVSFVAKLINFCTESPTESSMSYARHLFEAMSEPDI 94
Query: 78 FLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGS 137
++N++ + + + + S F + +G +PD YT+P ++KAC+ EG+ +H
Sbjct: 95 VIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQLHCL 154
Query: 138 ALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEA 197
+++ GL+++V+V +LI+MY +C ++ AR VFDR+ VV + AM+ GY EA
Sbjct: 155 SMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEA 214
Query: 198 KKLFDGM 204
LF M
Sbjct: 215 LSLFREM 221
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 96/189 (50%), Gaps = 3/189 (1%)
Query: 19 TLLKAC---KRTEHLQQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSP 75
+LLKAC K E +Q+H ++ GL+ + ++ I++ + + VF R++ P
Sbjct: 134 SLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEP 193
Query: 76 TTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVH 135
+N +I + + + LS F M+ P+ T V+ +C+ + GK +H
Sbjct: 194 CVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIH 253
Query: 136 GSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVV 195
A + + V V T+LIDM+ KCG + DA +F++M ++ +W+AM+V Y G
Sbjct: 254 KYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAE 313
Query: 196 EAKKLFDGM 204
++ +F+ M
Sbjct: 314 KSMLMFERM 322
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 104 bits (259), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 99/183 (54%), Gaps = 6/183 (3%)
Query: 28 EHLQQIHACIIQRGLEQDQFLISNFISLAHSLST---IAYSTTVFSRVLSPTTFLWNTLI 84
+ ++QIHA + G +D L+ +F+ A +LS + Y+ + R PT F N++I
Sbjct: 20 KEVRQIHAKLYVDGTLKDDHLVGHFVK-AVALSDHKYLDYANQILDRSEKPTLFALNSMI 78
Query: 85 KSHCQNSYFPATLSAFARMKANGS--VPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCG 142
++HC++ + + R+ ++G+ PD YT +++AC+ + G VHG +R G
Sbjct: 79 RAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETGLQVHGMTIRRG 138
Query: 143 LEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFD 202
+ D V T LI +Y + G + KVF+ + + V TAMV GDVV A+KLF+
Sbjct: 139 FDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFARKLFE 198
Query: 203 GMP 205
GMP
Sbjct: 199 GMP 201
Score = 63.9 bits (154), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 91/227 (40%), Gaps = 39/227 (17%)
Query: 20 LLKAC---KRTEHLQQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPT 76
L++AC + E Q+H I+RG + D + + ISL L + VF+ + P
Sbjct: 114 LVQACTGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPD 173
Query: 77 -------------------------------TFLWNTLIKSHCQNSYFPATLSAFARMKA 105
WN +I + Q L+ F M+
Sbjct: 174 FVCRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQL 233
Query: 106 NGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGD 165
G + V+ AC+ + +G+ H R ++ V + T+L+D+Y KCG++
Sbjct: 234 EGVKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEK 293
Query: 166 ARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLF-----DGMPPG 207
A +VF M +NV +W++ + G G + +LF DG+ P
Sbjct: 294 AMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPN 340
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 78/173 (45%), Gaps = 7/173 (4%)
Query: 19 TLLKACKRTEHLQQ---IHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSP 75
++L AC + L Q H+ I + ++ L + + L + + VF +
Sbjct: 245 SVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEK 304
Query: 76 TTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVH 135
+ W++ + N + L F+ MK +G P+ T+ V++ CS + EG+ H
Sbjct: 305 NVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQR-H 363
Query: 136 GSALRC--GLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGR-NVVSWTAMV 185
++R G+E + L+D+Y + G + DA + +M + + W++++
Sbjct: 364 FDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLL 416
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 103 bits (258), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 96/194 (49%), Gaps = 17/194 (8%)
Query: 20 LLKACKRTEHLQQIHACIIQRG---LEQDQFLISNFIS---LAHSLSTIAYSTTVFSRVL 73
+ CK ++ IH ++ G L LIS +IS L+H++S + R
Sbjct: 34 FIHKCKTISQVKLIHQKLLSFGILTLNLTSHLISTYISVGCLSHAVSLL--------RRF 85
Query: 74 SPT---TFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLE 130
P+ + WN+LI+S+ N L F M + PD YT+P V KAC +
Sbjct: 86 PPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRC 145
Query: 131 GKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVA 190
G+S H +L G +VFVG +L+ MY +C + DARKVFD MS +VVSW +++ Y
Sbjct: 146 GESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAK 205
Query: 191 AGDVVEAKKLFDGM 204
G A ++F M
Sbjct: 206 LGKPKVALEMFSRM 219
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 95/189 (50%), Gaps = 4/189 (2%)
Query: 20 LLKACKRTEHL---QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPT 76
+ KAC + + HA + G + F+ + +++ +++ + VF +
Sbjct: 133 VFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWD 192
Query: 77 TFLWNTLIKSHCQNSYFPATLSAFARMKAN-GSVPDTYTYPLVIKACSAMCRGLEGKSVH 135
WN++I+S+ + L F+RM G PD T V+ C+++ GK +H
Sbjct: 193 VVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLH 252
Query: 136 GSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVV 195
A+ + +++FVG L+DMY KCG + +A VF MS ++VVSW AMV GY G
Sbjct: 253 CFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFE 312
Query: 196 EAKKLFDGM 204
+A +LF+ M
Sbjct: 313 DAVRLFEKM 321
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 85/189 (44%), Gaps = 14/189 (7%)
Query: 29 HLQQIHACIIQ-------RGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPT---TF 78
H ++IH I+ G + +I+ I + + + +F LSP
Sbjct: 383 HGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDS-LSPKERDVV 441
Query: 79 LWNTLIKSHCQNSYFPATLSAFARMKANG--SVPDTYTYPLVIKACSAMCRGLEGKSVHG 136
W +I + Q+ L + M + P+ +T + AC+++ GK +H
Sbjct: 442 TWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHA 501
Query: 137 SALRCGLEE-DVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVV 195
ALR +FV LIDMY KCG I DAR VFD M +N V+WT+++ GY G
Sbjct: 502 YALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGE 561
Query: 196 EAKKLFDGM 204
EA +FD M
Sbjct: 562 EALGIFDEM 570
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 91/218 (41%), Gaps = 44/218 (20%)
Query: 31 QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQN 90
+Q+H + + Q+ F+ + + + + + TVFS + WN ++ + Q
Sbjct: 249 KQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQI 308
Query: 91 SYFPATLSAFARMK-----------------------------------ANGSVPDTYTY 115
F + F +M+ ++G P+ T
Sbjct: 309 GRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTL 368
Query: 116 PLVIKACSAMCRGLEGKSVHGSALRCGLE-------EDVFVGTSLIDMYGKCGEIGDARK 168
V+ C+++ + GK +H A++ ++ ++ V LIDMY KC ++ AR
Sbjct: 369 ISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARA 428
Query: 169 VFDRMS--GRNVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
+FD +S R+VV+WT M+ GY GD +A +L M
Sbjct: 429 MFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEM 466
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 103 bits (258), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 95/181 (52%), Gaps = 5/181 (2%)
Query: 32 QIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQNS 91
IH +I+ GL ++ L +N +SL I + +F + T F W +I + ++
Sbjct: 44 HIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTKSQ 103
Query: 92 YFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVGT 151
F + LS F M A+G+ P+ +T+ V+++C+ + G VHGS ++ G E + VG+
Sbjct: 104 EFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGS 163
Query: 152 SLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFD-----GMPP 206
SL D+Y KCG+ +A ++F + + +SWT M+ V A EA + + G+PP
Sbjct: 164 SLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPP 223
Query: 207 G 207
Sbjct: 224 N 224
Score = 91.3 bits (225), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 87/167 (52%), Gaps = 5/167 (2%)
Query: 31 QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQN 90
+ IH+ II RG+ + L ++ + S + + V + FLW +++ +N
Sbjct: 244 KTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRN 303
Query: 91 SYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLE-GKSVHGSALRCGLEEDVFV 149
+ F M++ G P+ +TY ++ CSA+ R L+ GK +H ++ G E+ V
Sbjct: 304 LRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAV-RSLDFGKQIHSQTIKVGFEDSTDV 362
Query: 150 GTSLIDMYGKC--GEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDV 194
G +L+DMY KC E+ +A +VF M NVVSWT +++G V G V
Sbjct: 363 GNALVDMYMKCSASEV-EASRVFGAMVSPNVVSWTTLILGLVDHGFV 408
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 90/188 (47%), Gaps = 3/188 (1%)
Query: 20 LLKACKRTEHLQ---QIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPT 76
+L+AC + H++ +IHA +++R ++ + + ++ + S + Y+ V +
Sbjct: 433 VLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRD 492
Query: 77 TFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHG 136
+ +L+ + LS M +G D + P I A + + GK +H
Sbjct: 493 NITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHLHC 552
Query: 137 SALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVE 196
+++ G V SL+DMY KCG + DA+KVF+ ++ +VVSW +V G + G +
Sbjct: 553 YSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGLASNGFISS 612
Query: 197 AKKLFDGM 204
A F+ M
Sbjct: 613 ALSAFEEM 620
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 89/184 (48%), Gaps = 12/184 (6%)
Query: 32 QIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQNS 91
++H +I+ G E + + S+ L + +FS + + T W +I S
Sbjct: 145 RVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGAR 204
Query: 92 YFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLE-GKSVHGSALRCGLEEDVFVG 150
+ L ++ M G P+ +T+ ++ A S + GLE GK++H + + G+ +V +
Sbjct: 205 KWREALQFYSEMVKAGVPPNEFTFVKLLGASSFL--GLEFGKTIHSNIIVRGIPLNVVLK 262
Query: 151 TSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYV-------AAGDVVEAKKLFDG 203
TSL+D Y + ++ DA +V + ++V WT++V G+V A G +E + L G
Sbjct: 263 TSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSL--G 320
Query: 204 MPPG 207
+ P
Sbjct: 321 LQPN 324
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 76/175 (43%), Gaps = 1/175 (0%)
Query: 19 TLLKACKRTEHLQQIHACIIQRGLEQDQFLISNFISLAHSLS-TIAYSTTVFSRVLSPTT 77
+L A + + +QIH+ I+ G E + + + + S + ++ VF ++SP
Sbjct: 333 SLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNV 392
Query: 78 FLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGS 137
W TLI + + M P+ T V++ACS + +H
Sbjct: 393 VSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAY 452
Query: 138 ALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAG 192
LR ++ ++ VG SL+D Y ++ A V M R+ +++T++V + G
Sbjct: 453 LLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNELG 507
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 42/74 (56%)
Query: 131 GKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVA 190
G +H ++ GL E++ + +L+ +Y K I +ARK+FD MS R V +WT M+ +
Sbjct: 42 GLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTK 101
Query: 191 AGDVVEAKKLFDGM 204
+ + A LF+ M
Sbjct: 102 SQEFASALSLFEEM 115
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/146 (21%), Positives = 64/146 (43%), Gaps = 5/146 (3%)
Query: 31 QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQN 90
+ +H ++ G ++++ + + ++ + VF + +P WN L+ N
Sbjct: 548 KHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGLASN 607
Query: 91 SYFPATLSAFARMKANGSVPDTYTYPLVIKACSA---MCRGLEGKSVHGSALRCGLEEDV 147
+ + LSAF M+ + PD+ T+ +++ ACS GLE V +E V
Sbjct: 608 GFISSALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDLGLEYFQVMKKIY--NIEPQV 665
Query: 148 FVGTSLIDMYGKCGEIGDARKVFDRM 173
L+ + G+ G + +A V + M
Sbjct: 666 EHYVHLVGILGRAGRLEEATGVVETM 691
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 103 bits (258), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 93/181 (51%), Gaps = 11/181 (6%)
Query: 19 TLLKACKR---TEHLQQIHACIIQRG----LEQDQFLISNFISLAHSLSTIAYSTTVFSR 71
++L+ C R ++ Q+H +++ G L +LI + L +AY VF
Sbjct: 11 SILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPL--MAYK--VFDS 66
Query: 72 VLSPTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEG 131
+ W+ L+ H N +LS F+ M G P+ +T+ +KAC + +G
Sbjct: 67 MPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKG 126
Query: 132 KSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAA 191
+HG L+ G E V VG SL+DMY KCG I +A KVF R+ R+++SW AM+ G+V A
Sbjct: 127 LQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHA 186
Query: 192 G 192
G
Sbjct: 187 G 187
Score = 97.4 bits (241), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 95/191 (49%), Gaps = 7/191 (3%)
Query: 18 ATLLKACKRTEHLQ---QIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLS 74
+T LKAC L+ QIH ++ G E + ++ + + I + VF R++
Sbjct: 111 STNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVD 170
Query: 75 PTTFLWNTLIKSHCQNSYFPATLSAFARMK-AN-GSVPDTYTYPLVIKACSAMCRGLEGK 132
+ WN +I Y L F M+ AN PD +T ++KACS+ GK
Sbjct: 171 RSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGK 230
Query: 133 SVHGSALRCGLE--EDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVA 190
+HG +R G + SL+D+Y KCG + ARK FD++ + ++SW+++++GY
Sbjct: 231 QIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQ 290
Query: 191 AGDVVEAKKLF 201
G+ VEA LF
Sbjct: 291 EGEFVEAMGLF 301
Score = 73.6 bits (179), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 90/193 (46%), Gaps = 9/193 (4%)
Query: 19 TLLKACKRTEHL---QQIHACIIQRGLE--QDQFLISNFISLAHSLSTIAYSTTVFSRVL 73
+LLKAC T + +QIH +++ G + + + L + + F ++
Sbjct: 215 SLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIK 274
Query: 74 SPTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKS 133
T W++LI + Q F + F R++ S D++ +I + +GK
Sbjct: 275 EKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQ 334
Query: 134 VHGSALR--CGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAA 191
+ A++ GLE V S++DMY KCG + +A K F M ++V+SWT ++ GY
Sbjct: 335 MQALAVKLPSGLETSVL--NSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKH 392
Query: 192 GDVVEAKKLFDGM 204
G ++ ++F M
Sbjct: 393 GLGKKSVRIFYEM 405
Score = 60.5 bits (145), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 48/87 (55%)
Query: 118 VIKACSAMCRGLEGKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRN 177
+++ C+ +G VH L+ G ++ LIDMY KC E A KVFD M RN
Sbjct: 12 ILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERN 71
Query: 178 VVSWTAMVVGYVAAGDVVEAKKLFDGM 204
VVSW+A++ G+V GD+ + LF M
Sbjct: 72 VVSWSALMSGHVLNGDLKGSLSLFSEM 98
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 103 bits (257), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 79/145 (54%), Gaps = 1/145 (0%)
Query: 42 LEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQNSYFPATLSAFA 101
L D L + I++ + S VF + S F WN +I S+ +N + L F
Sbjct: 116 LRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFI 175
Query: 102 RMKANGSV-PDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVGTSLIDMYGKC 160
M + + PD +TYP VIKAC+ M G +VHG ++ GL EDVFVG +L+ YG
Sbjct: 176 EMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTH 235
Query: 161 GEIGDARKVFDRMSGRNVVSWTAMV 185
G + DA ++FD M RN+VSW +M+
Sbjct: 236 GFVTDALQLFDIMPERNLVSWNSMI 260
Score = 100 bits (248), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 92/163 (56%)
Query: 30 LQQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQ 89
L+++H +++ ++ + + F++ +++Y+ VF + S T WN LI H Q
Sbjct: 414 LKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQ 473
Query: 90 NSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFV 149
++ +L A +MK +G +PD++T ++ ACS + GK VHG +R LE D+FV
Sbjct: 474 SNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFV 533
Query: 150 GTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAG 192
S++ +Y CGE+ + +FD M +++VSW ++ GY+ G
Sbjct: 534 YLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNG 576
Score = 99.8 bits (247), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 95/189 (50%), Gaps = 3/189 (1%)
Query: 19 TLLKACKRTEHL---QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSP 75
+LL AC + + L +++H II+ LE+D F+ + +SL + +F +
Sbjct: 501 SLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDK 560
Query: 76 TTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVH 135
+ WNT+I + QN + L F +M G + V ACS + G+ H
Sbjct: 561 SLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAH 620
Query: 136 GSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVV 195
AL+ LE+D F+ SLIDMY K G I + KVF+ + ++ SW AM++GY G
Sbjct: 621 AYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAK 680
Query: 196 EAKKLFDGM 204
EA KLF+ M
Sbjct: 681 EAIKLFEEM 689
Score = 85.1 bits (209), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 84/165 (50%), Gaps = 4/165 (2%)
Query: 33 IHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQNSY 92
+H +++ GL +D F+ + +S + + + +F + WN++I+ N +
Sbjct: 209 VHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGF 268
Query: 93 FPATLSAFARM-KANGS---VPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVF 148
+ M + NG +PD T V+ C+ GK VHG A++ L++++
Sbjct: 269 SEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELV 328
Query: 149 VGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGD 193
+ +L+DMY KCG I +A+ +F + +NVVSW MV G+ A GD
Sbjct: 329 LNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGD 373
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 74/158 (46%), Gaps = 3/158 (1%)
Query: 31 QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQN 90
++ HA ++ LE D F+ + I + +I S+ VF+ + +T WN +I + +
Sbjct: 617 REAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIH 676
Query: 91 SYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEG-KSVHGSALRCGLEEDVFV 149
+ F M+ G PD T+ V+ AC+ EG + + GL+ ++
Sbjct: 677 GLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKH 736
Query: 150 GTSLIDMYGKCGEIGDA-RKVFDRMSGR-NVVSWTAMV 185
+IDM G+ G++ A R V + MS +V W +++
Sbjct: 737 YACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLL 774
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/180 (20%), Positives = 70/180 (38%), Gaps = 5/180 (2%)
Query: 19 TLLKACKRTEHL---QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSP 75
T+L C R + + +H ++ L+++ L + + + I + +F +
Sbjct: 297 TVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNK 356
Query: 76 TTFLWNTLIKSHCQNSYFPATLSAFARMKANGS--VPDTYTYPLVIKACSAMCRGLEGKS 133
WNT++ T +M A G D T + C K
Sbjct: 357 NVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKE 416
Query: 134 VHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGD 193
+H +L+ + V + + Y KCG + A++VF + + V SW A++ G+ + D
Sbjct: 417 LHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSND 476
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 102 bits (255), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 97/185 (52%), Gaps = 3/185 (1%)
Query: 20 LLKACKRTEHLQQIHAC---IIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPT 76
+L+ C R + + AC II+ LE D L++ I+ + + VF +L +
Sbjct: 67 ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERS 126
Query: 77 TFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHG 136
WNT+I + +N L F M+ G +T V+ AC C LE K +H
Sbjct: 127 LVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHC 186
Query: 137 SALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVE 196
+++ ++ +++VGT+L+D+Y KCG I DA +VF+ M ++ V+W++MV GYV + E
Sbjct: 187 LSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEE 246
Query: 197 AKKLF 201
A L+
Sbjct: 247 ALLLY 251
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 85/182 (46%), Gaps = 5/182 (2%)
Query: 31 QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQN 90
+++H ++ ++ + ++ + + L I + VF + ++ W++++ + QN
Sbjct: 182 KKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQN 241
Query: 91 SYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVG 150
+ L + R + + +T VI ACS + +EGK +H + G +VFV
Sbjct: 242 KNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVA 301
Query: 151 TSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLF-----DGMP 205
+S +DMY KCG + ++ +F + +N+ W ++ G+ E LF DGM
Sbjct: 302 SSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMH 361
Query: 206 PG 207
P
Sbjct: 362 PN 363
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 83/184 (45%), Gaps = 8/184 (4%)
Query: 31 QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQN 90
+Q+HA I + G + F+ S+ + + ++ S +FS V LWNT+I ++
Sbjct: 283 KQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKH 342
Query: 91 SYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRC--GLEEDVF 148
+ + F +M+ +G P+ T+ ++ C EG+ +R GL +V
Sbjct: 343 ARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFF-KLMRTTYGLSPNVV 401
Query: 149 VGTSLIDMYGKCGEIGDARKVFDRMSGRNVVS-WTAMVVGYVAAGDV----VEAKKLFDG 203
+ ++D+ G+ G + +A ++ + S W +++ ++ V A+KLF+
Sbjct: 402 HYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFEL 461
Query: 204 MPPG 207
P
Sbjct: 462 EPEN 465
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 102 bits (255), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 91/174 (52%)
Query: 31 QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQN 90
+ IH +++ G D + S+ + + + S VF + WNT+I Q+
Sbjct: 127 RMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQS 186
Query: 91 SYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVG 150
L F RM+++G P++ + + I ACS + GK +H ++ G E D +V
Sbjct: 187 GEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVN 246
Query: 151 TSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
++L+DMYGKC + AR+VF +M +++V+W +M+ GYVA GD ++ + M
Sbjct: 247 SALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRM 300
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 100/192 (52%), Gaps = 6/192 (3%)
Query: 19 TLLKAC----KRTEHLQQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRV-L 73
+LL+ C K ++ +H I+ GL +D L + I++ + + VF +
Sbjct: 8 SLLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDI 67
Query: 74 SPTTFLWNTLIKSHCQNSYFPATLSAFARM-KANGSVPDTYTYPLVIKACSAMCRGLEGK 132
++WN+L+ + +NS F TL F R+ + VPD++T+P VIKA A+ R G+
Sbjct: 68 RSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGR 127
Query: 133 SVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAG 192
+H ++ G DV V +SL+ MY K ++ +VFD M R+V SW ++ + +G
Sbjct: 128 MIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSG 187
Query: 193 DVVEAKKLFDGM 204
+ +A +LF M
Sbjct: 188 EAEKALELFGRM 199
Score = 98.2 bits (243), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 91/187 (48%), Gaps = 3/187 (1%)
Query: 21 LKACKRT---EHLQQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTT 77
+ AC R E ++IH +++G E D+++ S + + + + VF ++ +
Sbjct: 215 ISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSL 274
Query: 78 FLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGS 137
WN++IK + + + RM G+ P T ++ ACS L GK +HG
Sbjct: 275 VAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGY 334
Query: 138 ALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEA 197
+R + D++V SLID+Y KCGE A VF + SW M+ Y++ G+ +A
Sbjct: 335 VIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKA 394
Query: 198 KKLFDGM 204
+++D M
Sbjct: 395 VEVYDQM 401
Score = 97.4 bits (241), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 94/189 (49%), Gaps = 3/189 (1%)
Query: 19 TLLKACKRTEHLQQ---IHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSP 75
++L AC R+ +L IH +I+ + D ++ + I L + TVFS+
Sbjct: 314 SILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKD 373
Query: 76 TTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVH 135
WN +I S+ + + + +M + G PD T+ V+ ACS + +GK +H
Sbjct: 374 VAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIH 433
Query: 136 GSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVV 195
S LE D + ++L+DMY KCG +A ++F+ + ++VVSWT M+ Y + G
Sbjct: 434 LSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPR 493
Query: 196 EAKKLFDGM 204
EA FD M
Sbjct: 494 EALYQFDEM 502
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 102 bits (255), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/187 (33%), Positives = 94/187 (50%), Gaps = 7/187 (3%)
Query: 20 LLKACKRTEHLQQIHACIIQRGLEQDQFLISNFISLAHSL-STIAYSTTVFSRVLSPTTF 78
+L+ CK L Q+H +I GL+ LI+ A+SL S +F V P
Sbjct: 11 MLRECKNFRCLLQVHGSLIVSGLKPHNQLIN-----AYSLFQRQDLSRVIFDSVRDPGVV 65
Query: 79 LWNTLIKSHCQNSYFPATLSAFARM-KANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGS 137
LWN++I+ + + L F M + G PD Y++ +KAC+ +G +H
Sbjct: 66 LWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKKGLRIHDL 125
Query: 138 ALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEA 197
GLE DV++GT+L++MY K ++ AR+VFD+M ++VV+W MV G G A
Sbjct: 126 IAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAA 185
Query: 198 KKLFDGM 204
LF M
Sbjct: 186 LLLFHDM 192
Score = 82.8 bits (203), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 82/173 (47%), Gaps = 1/173 (0%)
Query: 33 IHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRV-LSPTTFLWNTLIKSHCQNS 91
++ II+ G + + + I++ +A + +F + +T WN ++ + +
Sbjct: 524 VYGQIIKHGFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHG 583
Query: 92 YFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVGT 151
++ F +MK P+ T+ +++A + + G SVH S ++CG VG
Sbjct: 584 QAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQCGFCSQTPVGN 643
Query: 152 SLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
SL+DMY KCG I + K F +S + +VSW M+ Y A G A LF M
Sbjct: 644 SLVDMYAKCGMIESSEKCFIEISNKYIVSWNTMLSAYAAHGLASCAVSLFLSM 696
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 82/172 (47%)
Query: 33 IHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQNSY 92
IH +Q+GL D + ++ +S+ + + +F + W+ +I S+ Q
Sbjct: 322 IHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQ 381
Query: 93 FPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVGTS 152
+S F M P+ T V++ C+ + GKS+H A++ +E ++ T+
Sbjct: 382 HDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETATA 441
Query: 153 LIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
+I MY KCG A K F+R+ ++ V++ A+ GY GD +A ++ M
Sbjct: 442 VISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNM 493
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 87/175 (49%), Gaps = 8/175 (4%)
Query: 33 IHACIIQRGLEQDQFLI---SNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQ 89
+H +I++G F+ S I + + + + + +VF V W T++ ++
Sbjct: 223 LHGLVIKKG-----FIFAFSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAH 277
Query: 90 NSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFV 149
N +F L F M+ + ++A + + ++G ++H A++ GL DV V
Sbjct: 278 NGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSV 337
Query: 150 GTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
TSL+ MY KCGE+ A ++F + R+VVSW+AM+ Y AG EA LF M
Sbjct: 338 ATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDM 392
Score = 67.0 bits (162), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 85/188 (45%), Gaps = 7/188 (3%)
Query: 21 LKACKRTEHLQQ---IHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTT 77
LKAC + ++ IH I + GLE D ++ + + + + + VF ++
Sbjct: 107 LKACAGSMDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDV 166
Query: 78 FLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGS 137
WNT++ QN A L F M++ D + +I A S + + + +HG
Sbjct: 167 VTWNTMVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGL 226
Query: 138 ALRCGLEEDVFVGTS-LIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVE 196
++ G +F +S LIDMY C ++ A VF+ + ++ SW M+ Y G E
Sbjct: 227 VIKKGF---IFAFSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEE 283
Query: 197 AKKLFDGM 204
+LFD M
Sbjct: 284 VLELFDLM 291
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 76/175 (43%), Gaps = 1/175 (0%)
Query: 31 QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQN 90
+ IH I+ +E + + IS+ + + F R+ +N L + + Q
Sbjct: 421 KSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQI 480
Query: 91 SYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVG 150
+ MK +G PD+ T +++ C+ G V+G ++ G + + V
Sbjct: 481 GDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVA 540
Query: 151 TSLIDMYGKCGEIGDARKVFDRMS-GRNVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
+LI+M+ KC + A +FD+ ++ VSW M+ GY+ G EA F M
Sbjct: 541 HALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQM 595
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 69/155 (44%), Gaps = 2/155 (1%)
Query: 33 IHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQNSY 92
+H+ +IQ G + ++ + + I S F + + WNT++ ++ +
Sbjct: 626 VHSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTMLSAYAAHGL 685
Query: 93 FPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGS-ALRCGLEEDVFVGT 151
+S F M+ N PD+ ++ V+ AC EGK + R +E +V
Sbjct: 686 ASCAVSLFLSMQENELKPDSVSFLSVLSACRHAGLVEEGKRIFEEMGERHKIEAEVEHYA 745
Query: 152 SLIDMYGKCGEIGDARKVFDRMSGRNVVS-WTAMV 185
++D+ GK G G+A ++ RM + V W A++
Sbjct: 746 CMVDLLGKAGLFGEAVEMMRRMRVKTSVGVWGALL 780
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 96/192 (50%), Gaps = 5/192 (2%)
Query: 18 ATLLKACKRTE---HLQQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLS 74
+ LL+AC R + H +Q+H I GLE ++FL + + + + ++ + VF S
Sbjct: 115 SALLEACVRRKSLLHGKQVHVHIRINGLESNEFLRTKLVHMYTACGSVKDAQKVFDESTS 174
Query: 75 PTTFLWNTLIKSHC--QNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGK 132
+ WN L++ + LS F M+ G + Y+ V K+ + +G
Sbjct: 175 SNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLNVYSLSNVFKSFAGASALRQGL 234
Query: 133 SVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAG 192
H A++ GL VF+ TSL+DMY KCG++G AR+VFD + R++V W AM+ G
Sbjct: 235 KTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNK 294
Query: 193 DVVEAKKLFDGM 204
EA LF M
Sbjct: 295 RQWEALGLFRTM 306
Score = 77.4 bits (189), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 81/175 (46%), Gaps = 1/175 (0%)
Query: 31 QQIHACIIQ-RGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQ 89
+++HA +++ + + F+ S I L +A VF W L+ +
Sbjct: 336 KEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAA 395
Query: 90 NSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFV 149
N F L + M+ G PD T V+ C+ + +GK +H AL+ +V +
Sbjct: 396 NGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSL 455
Query: 150 GTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
TSL+ MY KCG ++FDR+ RNV +WTAM+ YV D+ ++F M
Sbjct: 456 VTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLM 510
Score = 73.9 bits (180), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 78/174 (44%), Gaps = 3/174 (1%)
Query: 18 ATLLKACKRTEHLQQ---IHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLS 74
AT+L C ++Q IH ++ + L+++ + + Y +F R+
Sbjct: 422 ATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQ 481
Query: 75 PTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSV 134
W +I + +N A + F M + PD+ T V+ CS + GK +
Sbjct: 482 RNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKEL 541
Query: 135 HGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGY 188
HG L+ E FV +I MYGKCG++ A FD ++ + ++WTA++ Y
Sbjct: 542 HGHILKKEFESIPFVSARIIKMYGKCGDLRSANFSFDAVAVKGSLTWTAIIEAY 595
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 59/119 (49%)
Query: 74 SPTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKS 133
S ++ + I+ + + L+ ++ G + T+ +++AC L GK
Sbjct: 73 SKNPYIIHRDIQIFARQNNLEVALTILDYLEQRGIPVNATTFSALLEACVRRKSLLHGKQ 132
Query: 134 VHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAG 192
VH GLE + F+ T L+ MY CG + DA+KVFD + NV SW A++ G V +G
Sbjct: 133 VHVHIRINGLESNEFLRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVISG 191
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 102 bits (254), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 97/187 (51%), Gaps = 3/187 (1%)
Query: 21 LKACKRTEHLQQIHACIIQRGLEQDQFLISNFISLAHSLS---TIAYSTTVFSRVLSPTT 77
L+ C+ L Q+H +I+ + ++ +S I + ++Y+ +VF + P+
Sbjct: 13 LENCRSLVELNQLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFESIDCPSV 72
Query: 78 FLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGS 137
++WN++I+ + + L + M G PD +T+P V+KACS + G VHG
Sbjct: 73 YIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGSCVHGF 132
Query: 138 ALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEA 197
++ G E +++V T L+ MY CGE+ +VF+ + NVV+W +++ G+V +A
Sbjct: 133 VVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDA 192
Query: 198 KKLFDGM 204
+ F M
Sbjct: 193 IEAFREM 199
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 90/196 (45%), Gaps = 11/196 (5%)
Query: 20 LLKACKRTEHLQQ---IHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPT 76
+LKAC +Q +H +++ G E + ++ + + + + Y VF +
Sbjct: 113 VLKACSGLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWN 172
Query: 77 TFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHG 136
W +LI N+ F + AF M++NG + ++ AC + GK HG
Sbjct: 173 VVAWGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHG 232
Query: 137 SALRCGLEE--------DVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGY 188
G + +V + TSLIDMY KCG++ AR +FD M R +VSW +++ GY
Sbjct: 233 FLQGLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGY 292
Query: 189 VAAGDVVEAKKLFDGM 204
GD EA +F M
Sbjct: 293 SQNGDAEEALCMFLDM 308
Score = 70.9 bits (172), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 77/159 (48%), Gaps = 4/159 (2%)
Query: 48 LISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQNSYFPATLSAFARMKANG 107
L ++ I + + + +F + T WN++I + QN L F M G
Sbjct: 253 LATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLG 312
Query: 108 SVPDTYTYPLVIKACSAMCRGLE--GKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGD 165
PD T+ VI+A +M +G G+S+H + G +D + +L++MY K G+
Sbjct: 313 IAPDKVTFLSVIRA--SMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAES 370
Query: 166 ARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
A+K F+ + ++ ++WT +++G + G EA +F M
Sbjct: 371 AKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRM 409
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 74/173 (42%), Gaps = 5/173 (2%)
Query: 18 ATLLKACKRTEHLQQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTT 77
A++++ C + Q IHA + + G +D ++ +++ + F + T
Sbjct: 326 ASMIQGCSQLG--QSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKKDT 383
Query: 78 FLWNTLIKSHCQNSYFPATLSAFARMKANGS-VPDTYTYPLVIKACSAMCRGLEGKSVHG 136
W +I + + LS F RM+ G+ PD TY V+ ACS + EG+
Sbjct: 384 IAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRYFA 443
Query: 137 SALRC-GLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGR-NVVSWTAMVVG 187
GLE V ++D+ + G +A ++ M + NV W A++ G
Sbjct: 444 EMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKPNVNIWGALLNG 496
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 102 bits (254), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 89/174 (51%)
Query: 33 IHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQNSY 92
H ++ G D +L S+ + L + + VF + W +I Q
Sbjct: 142 FHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWR 201
Query: 93 FPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVGTS 152
L +++M+ + S P+ YT+ ++ AC+ +G+SVH L GL+ + + S
Sbjct: 202 VDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNS 261
Query: 153 LIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGMPP 206
LI MY KCG++ DA ++FD+ S ++VVSW +M+ GY G ++A +LF+ M P
Sbjct: 262 LISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMP 315
Score = 67.0 bits (162), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 54/102 (52%)
Query: 103 MKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVGTSLIDMYGKCGE 162
+K +G D Y +++C G H AL+ G DV++G+SL+ +Y GE
Sbjct: 111 VKRDGWSFDAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGE 170
Query: 163 IGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
+ +A KVF+ M RNVVSWTAM+ G+ V KL+ M
Sbjct: 171 VENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKM 212
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 80/180 (44%), Gaps = 5/180 (2%)
Query: 20 LLKACKRTEHLQQ---IHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPT 76
LL AC + L Q +H + GL+ + ++ IS+ + + +F + +
Sbjct: 227 LLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKD 286
Query: 77 TFLWNTLIKSHCQNSYFPATLSAFA-RMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVH 135
WN++I + Q+ + F M +G+ PD TY V+ +C EG+
Sbjct: 287 VVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFF 346
Query: 136 GSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGR-NVVSWTAMVVGYVAAGDV 194
GL+ ++ + L+D+ G+ G + +A ++ + M + N V W +++ GDV
Sbjct: 347 NLMAEHGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVHGDV 406
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 102 bits (254), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 100/192 (52%), Gaps = 5/192 (2%)
Query: 18 ATLLKAC---KRTEHLQQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRV-- 72
A+LL+ C + +H ++H I L + + S + L S + VF R+
Sbjct: 96 ASLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRMSK 155
Query: 73 LSPTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGK 132
+ F WN+LI + + + ++ + +M +G PD +T+P V+KAC + G+
Sbjct: 156 RDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIGE 215
Query: 133 SVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAG 192
++H ++ G DV+V +L+ MY KCG+I AR VFD + ++ VSW +M+ GY+ G
Sbjct: 216 AIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHHG 275
Query: 193 DVVEAKKLFDGM 204
+ EA +F M
Sbjct: 276 LLHEALDIFRLM 287
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 81/172 (47%), Gaps = 12/172 (6%)
Query: 20 LLKACKRTEHLQ---QIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPT 76
+LKAC +Q IH +++ G D ++++ + + I + VF +
Sbjct: 201 VLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKD 260
Query: 77 TFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGL---EGKS 133
WN+++ + + L F M NG PD + S + R L G+
Sbjct: 261 YVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDK------VAISSVLARVLSFKHGRQ 314
Query: 134 VHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMV 185
+HG +R G+E ++ V +LI +Y K G++G A +FD+M R+ VSW A++
Sbjct: 315 LHGWVIRRGMEWELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAII 366
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 85/185 (45%), Gaps = 10/185 (5%)
Query: 28 EHLQQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSH 87
+H +Q+H +I+RG+E + + + I L + + +F ++L T WN +I +H
Sbjct: 310 KHGRQLHGWVIRRGMEWELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISAH 369
Query: 88 CQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHG-SALRCGLEED 146
+NS L F +M + PD T+ V+ C+ +G+ + + G++
Sbjct: 370 SKNS---NGLKYFEQMHRANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPK 426
Query: 147 VFVGTSLIDMYGKCGEIGDARKVFDRMSGRNV--VSWTAMVVGYVAAGDV----VEAKKL 200
+ ++++YG+ G + +A + + G W A++ G+ V A++L
Sbjct: 427 MEHYACMVNLYGRAGMMEEAYSMIVQEMGLEAGPTVWGALLYACYLHGNTDIGEVAAQRL 486
Query: 201 FDGMP 205
F+ P
Sbjct: 487 FELEP 491
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 102 bits (254), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 89/172 (51%)
Query: 31 QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQN 90
++IH I++ GL+ D+ L S+ + + I + +F +++ W ++I + ++
Sbjct: 238 KEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKS 297
Query: 91 SYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVG 150
S + S F+ + + P+ YT+ V+ AC+ + GK VHG R G + F
Sbjct: 298 SRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFAS 357
Query: 151 TSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFD 202
+SL+DMY KCG I A+ V D ++VSWT+++ G G EA K FD
Sbjct: 358 SSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFD 409
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 51/95 (53%)
Query: 110 PDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKV 169
P TY +I+ CS EGK VH G + + L+ MY KCG + DARKV
Sbjct: 83 PPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKV 142
Query: 170 FDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
FD M R++ SW MV GY G + EA+KLFD M
Sbjct: 143 FDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEM 177
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 73/135 (54%), Gaps = 1/135 (0%)
Query: 68 VFSRVLSPTTFLWNTLIKSHCQNSYFPATLSAFARM-KANGSVPDTYTYPLVIKACSAMC 126
+F + ++ W ++ + + L ++ M + S P+ +T + + A +A+
Sbjct: 173 LFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVK 232
Query: 127 RGLEGKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVV 186
GK +HG +R GL+ D + +SL+DMYGKCG I +AR +FD++ ++VVSWT+M+
Sbjct: 233 CIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMID 292
Query: 187 GYVAAGDVVEAKKLF 201
Y + E LF
Sbjct: 293 RYFKSSRWREGFSLF 307
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 102 bits (253), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 51/137 (37%), Positives = 74/137 (54%)
Query: 68 VFSRVLSPTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCR 127
+F + FLWN +IK + + ++RM G DT+TYP VIK+ + +
Sbjct: 86 LFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAGISS 145
Query: 128 GLEGKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVG 187
EGK +H ++ G DV+V SLI +Y K G DA KVF+ M R++VSW +M+ G
Sbjct: 146 LEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISG 205
Query: 188 YVAAGDVVEAKKLFDGM 204
Y+A GD + LF M
Sbjct: 206 YLALGDGFSSLMLFKEM 222
Score = 97.8 bits (242), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 95/176 (53%), Gaps = 6/176 (3%)
Query: 31 QQIHACIIQRGLEQ-DQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQ 89
++IH ++ +E D ++++ + + ++Y+ +F+ ++ WN +I + +
Sbjct: 251 KEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYAR 310
Query: 90 NSYFPATLSAFARM-KANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVF 148
N F +M + NG PD T ++ A + LEG+++HG A+R G +
Sbjct: 311 NGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAI----LEGRTIHGYAMRRGFLPHMV 366
Query: 149 VGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
+ T+LIDMYG+CG++ A +FDRM+ +NV+SW +++ YV G A +LF +
Sbjct: 367 LETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQEL 422
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 88/178 (49%), Gaps = 1/178 (0%)
Query: 28 EHLQQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSH 87
E ++IHA +I+ G D ++ ++ ISL L + VF + WN++I +
Sbjct: 147 EEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGY 206
Query: 88 CQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEE-D 146
++L F M G PD ++ + ACS + GK +H A+R +E D
Sbjct: 207 LALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGD 266
Query: 147 VFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
V V TS++DMY K GE+ A ++F+ M RN+V+W M+ Y G V +A F M
Sbjct: 267 VMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKM 324
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 77/162 (47%)
Query: 31 QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQN 90
+ IH ++RG L + I + + + +F R+ WN++I ++ QN
Sbjct: 350 RTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQN 409
Query: 91 SYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVG 150
+ L F + + VPD+ T ++ A + EG+ +H ++ + +
Sbjct: 410 GKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIIL 469
Query: 151 TSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAG 192
SL+ MY CG++ DARK F+ + ++VVSW ++++ Y G
Sbjct: 470 NSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHG 511
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 102 bits (253), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/187 (34%), Positives = 103/187 (55%), Gaps = 5/187 (2%)
Query: 21 LKACKRTEHLQQIHACIIQRGLEQ--DQFLISNFISLAHSLSTIAYSTTVFSRVLSP-TT 77
L CK H++Q+HA I++ + + FL + +S++ S ++Y+ VFS + SP +
Sbjct: 19 LSFCKSLNHIKQLHAHILRTVINHKLNSFLFN--LSVSSSSINLSYALNVFSSIPSPPES 76
Query: 78 FLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGS 137
++N ++ ++S AT+ + R++ G D +++ ++KA S + EG +HG
Sbjct: 77 IVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHGV 136
Query: 138 ALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEA 197
A + D FV T +DMY CG I AR VFD MS R+VV+W M+ Y G V EA
Sbjct: 137 AFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEA 196
Query: 198 KKLFDGM 204
KLF+ M
Sbjct: 197 FKLFEEM 203
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 70/140 (50%)
Query: 65 STTVFSRVLSPTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSA 124
+ +F + W T+I ++ ++ Y L F M +G PD + VI AC+
Sbjct: 297 AQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACAN 356
Query: 125 MCRGLEGKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAM 184
+ + K VH GLE ++ + +LI+MY KCG + R VF++M RNVVSW++M
Sbjct: 357 LGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSM 416
Query: 185 VVGYVAAGDVVEAKKLFDGM 204
+ G+ +A LF M
Sbjct: 417 INALSMHGEASDALSLFARM 436
Score = 77.0 bits (188), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 84/186 (45%), Gaps = 3/186 (1%)
Query: 20 LLKACKRTEHL---QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPT 76
+LKA + L ++H + D F+ + F+ + S I Y+ VF +
Sbjct: 117 ILKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRD 176
Query: 77 TFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHG 136
WNT+I+ +C+ F MK + +PD ++ AC ++++
Sbjct: 177 VVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYE 236
Query: 137 SALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVE 196
+ + D + T+L+ MY G + AR+ F +MS RN+ TAMV GY G + +
Sbjct: 237 FLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDD 296
Query: 197 AKKLFD 202
A+ +FD
Sbjct: 297 AQVIFD 302
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 80/183 (43%), Gaps = 12/183 (6%)
Query: 33 IHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQNSY 92
+H+CI GLE + + + I++ + + VF ++ W+++I + +
Sbjct: 366 VHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGE 425
Query: 93 FPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSAL-RCGLEEDVFVGT 151
LS FARMK P+ T+ V+ CS EGK + S + +
Sbjct: 426 ASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYG 485
Query: 152 SLIDMYGKCGEIGDARKVFDRMS-GRNVVSWTAMV----------VGYVAAGDVVEAKKL 200
++D++G+ + +A +V + M NVV W +++ +G AA ++E +
Sbjct: 486 CMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILELEPD 545
Query: 201 FDG 203
DG
Sbjct: 546 HDG 548
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 101 bits (252), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 95/189 (50%), Gaps = 3/189 (1%)
Query: 20 LLKACKRTEHLQQIHACIIQRG-LEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTF 78
L+KA ++QIH II G L +L ++ + L + VF+R+ P
Sbjct: 139 LMKASSFLSEVKQIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVS 198
Query: 79 LWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSA 138
+N +I + + + L + +M ++G PD YT ++ C + GK VHG
Sbjct: 199 SFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWI 258
Query: 139 LRCG--LEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVE 196
R G ++ + +L+DMY KC E G A++ FD M +++ SW MVVG+V GD+
Sbjct: 259 ERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEA 318
Query: 197 AKKLFDGMP 205
A+ +FD MP
Sbjct: 319 AQAVFDQMP 327
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 69/148 (46%), Gaps = 2/148 (1%)
Query: 59 LSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQNSYFPATLSA-FARMKANGSV-PDTYTYP 116
L + + VF ++ WN+L+ + + T+ F M V PD T
Sbjct: 313 LGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMV 372
Query: 117 LVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGR 176
+I + G+ VHG +R L+ D F+ ++LIDMY KCG I A VF + +
Sbjct: 373 SLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEK 432
Query: 177 NVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
+V WT+M+ G G+ +A +LF M
Sbjct: 433 DVALWTSMITGLAFHGNGQQALQLFGRM 460
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 70/174 (40%), Gaps = 2/174 (1%)
Query: 29 HLQQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHC 88
H + +H +I+ L+ D FL S I + I + VF LW ++I
Sbjct: 386 HGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLA 445
Query: 89 QNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSAL-RCGLEEDV 147
+ L F RM+ G P+ T V+ ACS EG V + G + +
Sbjct: 446 FHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPET 505
Query: 148 FVGTSLIDMYGKCGEIGDARKVFD-RMSGRNVVSWTAMVVGYVAAGDVVEAKKL 200
SL+D+ + G + +A+ + +M R S ++ G+ +E +L
Sbjct: 506 EHYGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSILSACRGGEDIETAEL 559
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 101 bits (252), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 76/136 (55%)
Query: 69 FSRVLSPTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRG 128
S + +P+ ++N ++KS F L+ F ++ G PD +T P+V+K+ + +
Sbjct: 3 MSLLQTPSLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKV 62
Query: 129 LEGKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGY 188
+EG+ VHG A++ GLE D +V SL+ MY G+I KVFD M R+VVSW ++ Y
Sbjct: 63 IEGEKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSY 122
Query: 189 VAAGDVVEAKKLFDGM 204
V G +A +F M
Sbjct: 123 VGNGRFEDAIGVFKRM 138
Score = 100 bits (250), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 94/177 (53%), Gaps = 4/177 (2%)
Query: 31 QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQN 90
+++H ++ GLE D ++ ++ + + SL I + VF + WN LI S+ N
Sbjct: 66 EKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGN 125
Query: 91 SYFPATLSAFARMKANGSVP-DTYTYPLVIKACSAMCRGLE-GKSVHGSALRCGLEEDVF 148
F + F RM ++ D T + ACSA+ + LE G+ ++ + E V
Sbjct: 126 GRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSAL-KNLEIGERIYRFVV-TEFEMSVR 183
Query: 149 VGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGMP 205
+G +L+DM+ KCG + AR VFD M +NV WT+MV GYV+ G + EA+ LF+ P
Sbjct: 184 IGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSP 240
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 62/135 (45%)
Query: 58 SLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPL 117
S I + +F R LW ++ + Q + F L F M+ G PD +
Sbjct: 225 STGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVS 284
Query: 118 VIKACSAMCRGLEGKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRN 177
++ C+ +GK +HG + D VGT+L+DMY KCG I A +VF + R+
Sbjct: 285 LLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERD 344
Query: 178 VVSWTAMVVGYVAAG 192
SWT+++ G G
Sbjct: 345 TASWTSLIYGLAMNG 359
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 101 bits (251), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 102/189 (53%), Gaps = 3/189 (1%)
Query: 19 TLLKACKRTEHLQ---QIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSP 75
++LKAC + L+ Q+H+ +++R ++ D F+ ++ + + I+ VF + +
Sbjct: 289 SILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNR 348
Query: 76 TTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVH 135
T W ++I +H + + +S F MK + + T +++AC ++ L GK +H
Sbjct: 349 NTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELH 408
Query: 136 GSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVV 195
++ +E++V++G++L+ +Y KCGE DA V ++ R+VVSWTAM+ G + G
Sbjct: 409 AQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHES 468
Query: 196 EAKKLFDGM 204
EA M
Sbjct: 469 EALDFLKEM 477
Score = 95.1 bits (235), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 94/190 (49%), Gaps = 3/190 (1%)
Query: 19 TLLKACKRTEHL---QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSP 75
++L+AC L +++HA II+ +E++ ++ S + L + V ++ S
Sbjct: 390 SILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSR 449
Query: 76 TTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVH 135
W +I + L M G P+ +TY +KAC+ L G+S+H
Sbjct: 450 DVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIH 509
Query: 136 GSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVV 195
A + +VFVG++LI MY KCG + +A +VFD M +N+VSW AM++GY G
Sbjct: 510 SIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCR 569
Query: 196 EAKKLFDGMP 205
EA KL M
Sbjct: 570 EALKLMYRME 579
Score = 94.4 bits (233), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 92/189 (48%), Gaps = 4/189 (2%)
Query: 20 LLKACKRTEHLQ---QIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPT 76
LL C R + Q+H +++ G+ + + S+ + + + F +
Sbjct: 190 LLNLCSRRAEFELGRQVHGNMVKVGV-GNLIVESSLVYFYAQCGELTSALRAFDMMEEKD 248
Query: 77 TFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHG 136
W +I + + + + F M + +P+ +T ++KACS G+ VH
Sbjct: 249 VISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVHS 308
Query: 137 SALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVE 196
++ ++ DVFVGTSL+DMY KCGEI D RKVFD MS RN V+WT+++ + G E
Sbjct: 309 LVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEE 368
Query: 197 AKKLFDGMP 205
A LF M
Sbjct: 369 AISLFRIMK 377
Score = 70.9 bits (172), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 88/188 (46%), Gaps = 2/188 (1%)
Query: 18 ATLLKACKRTEHLQQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTT 77
A L++ +++IHA ++ +Q + +N IS L + Y+ VF + T
Sbjct: 89 AEWLQSSNGMRLIKRIHAMALKCFDDQVIYFGNNLISSCVRLGDLVYARKVFDSMPEKNT 148
Query: 78 FLWNTLIKSHCQNSYFPATLSAFARMKANG-SVPDTYTYPLVIKACSAMCRGLEGKSVHG 136
W +I + + + F +G + + ++ CS G+ VHG
Sbjct: 149 VTWTAMIDGYLKYGLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVHG 208
Query: 137 SALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVE 196
+ ++ G+ ++ V +SL+ Y +CGE+ A + FD M ++V+SWTA++ G ++
Sbjct: 209 NMVKVGVG-NLIVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIK 267
Query: 197 AKKLFDGM 204
A +F GM
Sbjct: 268 AIGMFIGM 275
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 101 bits (251), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 86/150 (57%), Gaps = 4/150 (2%)
Query: 60 STIAYSTTVFS-RVLSPTTFLWNTLIKSHCQNSYFP---ATLSAFARMKANGSVPDTYTY 115
+ IAY+ +F R L +FLWN +I++ N P + +S + RM+ + PD +T+
Sbjct: 6 AIIAYANPIFHIRHLKLESFLWNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTF 65
Query: 116 PLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSG 175
P ++ + G+ H L GL++D FV TSL++MY CG++ A++VFD
Sbjct: 66 PFLLPSFHNPLHLPLGQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGS 125
Query: 176 RNVVSWTAMVVGYVAAGDVVEAKKLFDGMP 205
+++ +W ++V Y AG + +A+KLFD MP
Sbjct: 126 KDLPAWNSVVNAYAKAGLIDDARKLFDEMP 155
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 96/211 (45%), Gaps = 37/211 (17%)
Query: 31 QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQ- 89
Q+ HA I+ GL++D F+ ++ +++ S + + VF S WN+++ ++ +
Sbjct: 82 QRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKA 141
Query: 90 -------------------------NSY-----FPATLSAFARM---KANGSV--PDTYT 114
N Y + L F M K N + P+ +T
Sbjct: 142 GLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFT 201
Query: 115 YPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRM- 173
V+ AC + +GK VH + +E D+ +GT+LIDMY KCG + A++VF+ +
Sbjct: 202 MSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALG 261
Query: 174 SGRNVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
S ++V +++AM+ G E +LF M
Sbjct: 262 SKKDVKAYSAMICCLAMYGLTDECFQLFSEM 292
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 101 bits (251), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 100/195 (51%), Gaps = 9/195 (4%)
Query: 18 ATLLKACKRTEHLQQIHACIIQRGLEQDQFL---ISNFISLAHSLSTIAYSTTVFSRVLS 74
+ ++ + HL+Q+ + +I GL FL + F +L L ++Y+ +F R
Sbjct: 28 SAVISKSRHLNHLKQVQSFMIVSGLSHSHFLCFKLLRFCTL--RLCNLSYARFIFDRFSF 85
Query: 75 PTTFLWNTLIKSHCQNSYFPATLS-AFARMKANGSVP--DTYTYPLVIKACSAMCRGLEG 131
P T L+ ++ ++ + A+ + +F R+ N SVP + + YPLV+K+ +
Sbjct: 86 PNTHLYAAVLTAYSSSLPLHASSAFSFFRLMVNRSVPRPNHFIYPLVLKSTPYLSSAFST 145
Query: 132 KSVHGSALRCGLEEDVFVGTSLIDMYGK-CGEIGDARKVFDRMSGRNVVSWTAMVVGYVA 190
VH + G V V T+L+ Y I AR++FD MS RNVVSWTAM+ GY
Sbjct: 146 PLVHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSERNVVSWTAMLSGYAR 205
Query: 191 AGDVVEAKKLFDGMP 205
+GD+ A LF+ MP
Sbjct: 206 SGDISNAVALFEDMP 220
Score = 80.5 bits (197), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 65/126 (51%), Gaps = 1/126 (0%)
Query: 80 WNTLIKSHCQNSYFPATLSAFARMKANGSV-PDTYTYPLVIKACSAMCRGLEGKSVHGSA 138
WN ++ + QN F +S F RM S+ P+ T V+ AC+ K +H A
Sbjct: 227 WNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFA 286
Query: 139 LRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAK 198
R L DVFV SL+D+YGKCG + +A VF S +++ +W +M+ + G EA
Sbjct: 287 YRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASKKSLTAWNSMINCFALHGRSEEAI 346
Query: 199 KLFDGM 204
+F+ M
Sbjct: 347 AVFEEM 352
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 100 bits (250), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 95/188 (50%), Gaps = 4/188 (2%)
Query: 21 LKACKRTEHLQQ---IHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTT 77
+KAC L+ IH ++ GL++D ++ + + + L T+ + VF + +
Sbjct: 116 IKACVGLGLLENGILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNS 175
Query: 78 FLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGS 137
LW L+K + + S P F M+ G D T ++KAC + G GK VHG
Sbjct: 176 VLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGV 235
Query: 138 ALRCG-LEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVE 196
++R +++ ++ S+IDMY KC + +ARK+F+ RNVV WT ++ G+ VE
Sbjct: 236 SIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVE 295
Query: 197 AKKLFDGM 204
A LF M
Sbjct: 296 AFDLFRQM 303
Score = 92.8 bits (229), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 95/187 (50%), Gaps = 4/187 (2%)
Query: 19 TLLKACKRTEHLQQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRV--LSPT 76
T+L K H QQ+HA +I G E + L S+ + + + ++T+ F+R+
Sbjct: 12 TILSQAKTLNHTQQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCWKRN 71
Query: 77 TFLWNTLIKSHCQNSY--FPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSV 134
WNT++ + ++ + L + RM+ + D++ IKAC + G +
Sbjct: 72 RHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENGILI 131
Query: 135 HGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDV 194
HG A++ GL++D +V SL++MY + G + A+KVFD + RN V W ++ GY+
Sbjct: 132 HGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKD 191
Query: 195 VEAKKLF 201
E +LF
Sbjct: 192 PEVFRLF 198
Score = 92.4 bits (228), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 83/173 (47%), Gaps = 1/173 (0%)
Query: 33 IHACIIQRG-LEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQNS 91
+H I+R ++Q +L ++ I + + + +F + +W TLI +
Sbjct: 232 VHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCE 291
Query: 92 YFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVGT 151
F +M +P+ T ++ +CS++ GKSVHG +R G+E D T
Sbjct: 292 RAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFT 351
Query: 152 SLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
S IDMY +CG I AR VFD M RNV+SW++M+ + G EA F M
Sbjct: 352 SFIDMYARCGNIQMARTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHKM 404
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 79/162 (48%), Gaps = 6/162 (3%)
Query: 28 EHLQQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSH 87
H + +H +I+ G+E D ++FI + I + TVF + W+++I +
Sbjct: 329 RHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINAF 388
Query: 88 CQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALR-CGL--E 144
N F L F +MK+ VP++ T+ ++ ACS EG S R G+ E
Sbjct: 389 GINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPE 448
Query: 145 EDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVS-WTAMV 185
E+ + ++D+ G+ GEIG+A+ D M + + S W A++
Sbjct: 449 EEHY--ACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALL 488
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 100 bits (249), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 102/222 (45%), Gaps = 35/222 (15%)
Query: 18 ATLLKACKRTE----HLQQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRV- 72
A LL +C +++ +++ +HA +I+ G + F+ + I ++ VF ++
Sbjct: 23 AKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMP 82
Query: 73 -------------LSPTTFL-----------------WNTLIKSHCQNSYFPATLSAFAR 102
L+ FL WN+++ Q+ L FA
Sbjct: 83 QRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAM 142
Query: 103 MKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVGTSLIDMYGKCGE 162
M G V + Y++ V+ ACS + +G VH + DV++G++L+DMY KCG
Sbjct: 143 MHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGN 202
Query: 163 IGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
+ DA++VFD M RNVVSW +++ + G VEA +F M
Sbjct: 203 VNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMM 244
Score = 94.0 bits (232), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 94/187 (50%), Gaps = 10/187 (5%)
Query: 24 CKRTEHLQQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTL 83
C R + + I + R + + +IS + A + ST A + +F+++ WN L
Sbjct: 302 CSRIKEARFIFDSMPIRNVIAETSMISGY---AMAASTKA-ARLMFTKMAERNVVSWNAL 357
Query: 84 IKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCR---GLEGKS---VHGS 137
I + QN LS F +K P Y++ ++KAC+ + G++ HG
Sbjct: 358 IAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGF 417
Query: 138 ALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEA 197
+ G E+D+FVG SLIDMY KCG + + VF +M R+ VSW AM++G+ G EA
Sbjct: 418 KFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEA 477
Query: 198 KKLFDGM 204
+LF M
Sbjct: 478 LELFREM 484
Score = 91.7 bits (226), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 88/191 (46%), Gaps = 4/191 (2%)
Query: 18 ATLLKACKRTEHLQ---QIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLS 74
A++L AC + Q+H+ I + D ++ S + + + + VF +
Sbjct: 156 ASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGD 215
Query: 75 PTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSV 134
WN+LI QN L F M + PD T VI AC+++ G+ V
Sbjct: 216 RNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEV 275
Query: 135 HGSALRCG-LEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGD 193
HG ++ L D+ + + +DMY KC I +AR +FD M RNV++ T+M+ GY A
Sbjct: 276 HGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAAS 335
Query: 194 VVEAKKLFDGM 204
A+ +F M
Sbjct: 336 TKAARLMFTKM 346
Score = 74.3 bits (181), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 60/109 (55%), Gaps = 2/109 (1%)
Query: 99 AFARMKAN-GSVPDTYTYPLVIKAC-SAMCRGLEGKSVHGSALRCGLEEDVFVGTSLIDM 156
+F ++ A+ S D+ + ++ +C + + + VH S ++ G ++F+ LID
Sbjct: 5 SFLKLAADLSSFTDSSPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDA 64
Query: 157 YGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGMP 205
Y KCG + D R+VFD+M RN+ +W ++V G G + EA LF MP
Sbjct: 65 YSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMP 113
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 75/179 (41%), Gaps = 11/179 (6%)
Query: 18 ATLLKACKRTEHLQ---QIHACII------QRGLEQDQFLISNFISLAHSLSTIAYSTTV 68
A +LKAC L Q H ++ Q G E D F+ ++ I + + V
Sbjct: 390 ANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLV 449
Query: 69 FSRVLSPTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRG 128
F +++ WN +I QN Y L F M +G PD T V+ AC
Sbjct: 450 FRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFV 509
Query: 129 LEGKSVHGSALR-CGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGR-NVVSWTAMV 185
EG+ S R G+ T ++D+ G+ G + +A+ + + M + + V W +++
Sbjct: 510 EEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLL 568
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 100 bits (249), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 97/189 (51%), Gaps = 3/189 (1%)
Query: 20 LLKACKRTEHLQQIHA-CIIQRGLEQDQFLISNFISLAHSLS--TIAYSTTVFSRVLSPT 76
L+ C E +Q+HA ++ R + L+ + S + Y +
Sbjct: 9 FLQRCVVLEQAKQVHAQLVVNRYNHLEPILVHQTLHFTKEFSRNIVTYVKRILKGFNGHD 68
Query: 77 TFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHG 136
+F W L++ Q+ F T+ + M +G P ++ V++AC M ++GK +H
Sbjct: 69 SFSWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKMENMVDGKPIHA 128
Query: 137 SALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVE 196
AL+ GL V+V T L+ +Y + G I A+K FD ++ +N VSW +++ GY+ +G++ E
Sbjct: 129 QALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELDE 188
Query: 197 AKKLFDGMP 205
A+++FD +P
Sbjct: 189 ARRVFDKIP 197
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 84/189 (44%), Gaps = 17/189 (8%)
Query: 19 TLLKACKRTEHL---QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSP 75
++L+AC + E++ + IHA ++ GL ++ + + L L I + F +
Sbjct: 109 SVLRACGKMENMVDGKPIHAQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEK 168
Query: 76 TTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKS-- 133
T WN+L+ + ++ F ++ D ++ L+I + + +G G +
Sbjct: 169 NTVSWNSLLHGYLESGELDEARRVFDKIPEK----DAVSWNLIISSYAK--KGDMGNACS 222
Query: 134 -VHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAG 192
L+ ++ +G Y C E+ AR FD M +N VSW M+ GY G
Sbjct: 223 LFSAMPLKSPASWNILIGG-----YVNCREMKLARTYFDAMPQKNGVSWITMISGYTKLG 277
Query: 193 DVVEAKKLF 201
DV A++LF
Sbjct: 278 DVQSAEELF 286
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 70/155 (45%), Gaps = 7/155 (4%)
Query: 59 LSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSV--PDTYTYP 116
L + + +F + +++ +I + QN L FA+M S PD T
Sbjct: 276 LGDVQSAEELFRLMSKKDKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLS 335
Query: 117 LVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGR 176
V+ A S + G V G++ D + TSLID+Y K G+ A K+F ++ +
Sbjct: 336 SVVSANSQLGNTSFGTWVESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKK 395
Query: 177 NVVSWTAMVVGYVAAGDVVEAKKLFDGM-----PP 206
+ VS++AM++G G EA LF M PP
Sbjct: 396 DTVSYSAMIMGCGINGMATEANSLFTAMIEKKIPP 430
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 100 bits (248), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 96/191 (50%), Gaps = 5/191 (2%)
Query: 20 LLKACKRTEHLQ---QIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPT 76
L AC HL Q+H +++ G + D + + I I S +F+ + +
Sbjct: 215 FLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKN 274
Query: 77 TFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLE-GKSVH 135
W +L+ ++ QN + R + + + V+ AC+ M GLE G+S+H
Sbjct: 275 AVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMA-GLELGRSIH 333
Query: 136 GSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVV 195
A++ +E +FVG++L+DMYGKCG I D+ + FD M +N+V+ +++ GY G V
Sbjct: 334 AHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVD 393
Query: 196 EAKKLFDGMPP 206
A LF+ M P
Sbjct: 394 MALALFEEMAP 404
Score = 95.5 bits (236), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 79/165 (47%), Gaps = 6/165 (3%)
Query: 47 FLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQNSYFPATLSAFARMKAN 106
FL + I++ L + V + W +LI QN +F L F M+
Sbjct: 43 FLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRRE 102
Query: 107 GSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDA 166
G VP+ +T+P KA +++ + GK +H A++CG DVFVG S DMY K DA
Sbjct: 103 GVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDA 162
Query: 167 RKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLF------DGMP 205
RK+FD + RN+ +W A + V G EA + F DG P
Sbjct: 163 RKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHP 207
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 74/171 (43%)
Query: 31 QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQN 90
+QIHA ++ G D F+ + + + +F + WN I + +
Sbjct: 128 KQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTD 187
Query: 91 SYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVG 150
+ AF + P++ T+ + ACS G +HG LR G + DV V
Sbjct: 188 GRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVC 247
Query: 151 TSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLF 201
LID YGKC +I + +F M +N VSW ++V YV + +A L+
Sbjct: 248 NGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLY 298
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 100 bits (248), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 93/192 (48%), Gaps = 5/192 (2%)
Query: 18 ATLLKACKRTEHLQ---QIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLS 74
+ +L +C R L+ QIH +I+ + ++ ++S I++ + S +F ++
Sbjct: 420 SVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCIN 479
Query: 75 PTTF-LWNTLIKSHCQNSYFPATLSAFARMKANGSV-PDTYTYPLVIKACSAMCRGLEGK 132
WN++I N L F RM + P+ ++ V+ +CS +C L G+
Sbjct: 480 ELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGR 539
Query: 133 SVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAG 192
HG ++ G D FV T+L DMY KCGEI AR+ FD + +N V W M+ GY G
Sbjct: 540 QFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNG 599
Query: 193 DVVEAKKLFDGM 204
EA L+ M
Sbjct: 600 RGDEAVGLYRKM 611
Score = 91.3 bits (225), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 103/223 (46%), Gaps = 37/223 (16%)
Query: 18 ATLLKACKRTEHLQQ----IHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSR-- 71
A+LL+ C R E + IH I++ G++ D +L + + L Y+ VF
Sbjct: 10 ASLLR-CYRDERCKLSGKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMS 68
Query: 72 ---VLSPTTFL--------------------------WNTLIKSHCQNSYFPATLSAFAR 102
V S FL WN +I + + L + R
Sbjct: 69 VRDVYSWNAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKR 128
Query: 103 MKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVGTSLIDMYGKCGE 162
M +G +P +T V+ ACS + G+ G HG A++ GL++++FVG +L+ MY KCG
Sbjct: 129 MVCDGFLPSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGF 188
Query: 163 IGD-ARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
I D +VF+ +S N VS+TA++ G V+EA ++F M
Sbjct: 189 IVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLM 231
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 50/78 (64%)
Query: 129 LEGKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGY 188
L GK +HG +R G++ D ++ L+D+Y +CG+ ARKVFD MS R+V SW A +
Sbjct: 23 LSGKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFR 82
Query: 189 VAAGDVVEAKKLFDGMPP 206
GD+ EA ++FDGMP
Sbjct: 83 CKVGDLGEACEVFDGMPE 100
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 83/188 (44%), Gaps = 5/188 (2%)
Query: 18 ATLLKACKRT---EHLQQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLS 74
AT+L +C R H +Q H +++ G D F+ + + I + F VL
Sbjct: 523 ATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLR 582
Query: 75 PTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSV 134
T +WN +I + N + + +M ++G PD T+ V+ ACS G +
Sbjct: 583 KNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEI 642
Query: 135 HGSALRC-GLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGR-NVVSWTAMVVGYVAAG 192
S R G+E ++ ++D G+ G + DA K+ + + + V W ++ G
Sbjct: 643 LSSMQRIHGIEPELDHYICIVDCLGRAGRLEDAEKLAEATPYKSSSVLWEILLSSCRVHG 702
Query: 193 DVVEAKKL 200
DV A+++
Sbjct: 703 DVSLARRV 710
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 66/123 (53%), Gaps = 3/123 (2%)
Query: 68 VFSRVLSPTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCR 127
+FS + P+ WN ++ + ++ +S F +M+ PD T +++ +C+ + R
Sbjct: 372 IFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARL-R 430
Query: 128 GLEG-KSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDR-MSGRNVVSWTAMV 185
LEG K +HG +R + ++ + + LI +Y +C ++ + +FD ++ ++ W +M+
Sbjct: 431 FLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIACWNSMI 490
Query: 186 VGY 188
G+
Sbjct: 491 SGF 493
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 80/184 (43%), Gaps = 13/184 (7%)
Query: 18 ATLLKACKRTEHL---QQIHACIIQRGLEQDQFLISNFISL-AHSLSTIAYSTTVFSRVL 73
A++L AC + + H ++ GL+++ F+ + +S+ A + Y VF +
Sbjct: 142 ASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLS 201
Query: 74 SPTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDT--YTYPLVIKACSAMCRGLE- 130
P + +I + + + F M G D+ + L I A C L
Sbjct: 202 QPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSE 261
Query: 131 ------GKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAM 184
GK +H ALR G D+ + SL+++Y K ++ A +F M NVVSW M
Sbjct: 262 IYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIM 321
Query: 185 VVGY 188
+VG+
Sbjct: 322 IVGF 325
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 99.8 bits (247), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 97/193 (50%), Gaps = 15/193 (7%)
Query: 20 LLKACKRTEHLQ---QIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPT 76
L++ C + +++ Q+H ++++GLE F ++ + I + VF VL
Sbjct: 148 LIRLCTDSTNMKAGIQLHCLMVKQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRD 207
Query: 77 TFLWNTLIKSHCQNSYFPATLSAFARMKANGSVP-----DTYTYPLVIKACSAMCRGLEG 131
LWN L+ S+ N AF +K GS D +T+ ++ AC R +G
Sbjct: 208 LVLWNALVSSYVLNGMID---EAFGLLKLMGSDKNRFRGDYFTFSSLLSAC----RIEQG 260
Query: 132 KSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAA 191
K +H + + D+ V T+L++MY K + DAR+ F+ M RNVVSW AM+VG+
Sbjct: 261 KQIHAILFKVSYQFDIPVATALLNMYAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQN 320
Query: 192 GDVVEAKKLFDGM 204
G+ EA +LF M
Sbjct: 321 GEGREAMRLFGQM 333
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 79/180 (43%), Gaps = 5/180 (2%)
Query: 30 LQQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQ 89
++Q H ++++G+ FL + + + + +F + WN LI Q
Sbjct: 55 VKQEHGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIVTWNILIHGVIQ 114
Query: 90 -----NSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLE 144
N +R+ D ++ +I+ C+ G +H ++ GLE
Sbjct: 115 RDGDTNHRAHLGFCYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQGLE 174
Query: 145 EDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
F TSL+ YGKCG I +AR+VF+ + R++V W A+V YV G + EA L M
Sbjct: 175 SSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLKLM 234
Score = 67.0 bits (162), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 85/187 (45%), Gaps = 1/187 (0%)
Query: 18 ATLLKACKRTEHLQQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTT 77
++LL AC R E +QIHA + + + D + + +++ + ++ + F ++
Sbjct: 249 SSLLSAC-RIEQGKQIHAILFKVSYQFDIPVATALLNMYAKSNHLSDARECFESMVVRNV 307
Query: 78 FLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGS 137
WN +I QN + F +M PD T+ V+ +C+ E K V
Sbjct: 308 VSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQVQAM 367
Query: 138 ALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEA 197
+ G + + V SLI Y + G + +A F + ++VSWT+++ + G E+
Sbjct: 368 VTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSIREPDLVSWTSVIGALASHGFAEES 427
Query: 198 KKLFDGM 204
++F+ M
Sbjct: 428 LQMFESM 434
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 99/208 (47%), Gaps = 22/208 (10%)
Query: 19 TLLKACK--RTEHLQQIHACIIQRGL--------------------EQDQFLISNFISLA 56
++LKAC + +IH+ I++ G+ E+ + + S F A
Sbjct: 488 SILKACTGGSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRA 547
Query: 57 HSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYP 116
+ T+ + ++ L WN++I + F RM G PD +TY
Sbjct: 548 NVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYA 607
Query: 117 LVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGR 176
V+ C+ + GK +H ++ L+ DV++ ++L+DMY KCG++ D+R +F++ R
Sbjct: 608 TVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRR 667
Query: 177 NVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
+ V+W AM+ GY G EA +LF+ M
Sbjct: 668 DFVTWNAMICGYAHHGKGEEAIQLFERM 695
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 92/208 (44%), Gaps = 24/208 (11%)
Query: 20 LLKACKRTEHLQ---QIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPT 76
+ +AC + L QI+ I+ L D + + I + +A + VF +
Sbjct: 388 VFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRD 447
Query: 77 TFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHG 136
WN +I +H QN TL F M + PD +T+ ++KAC+ G G +H
Sbjct: 448 AVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTGGSLGY-GMEIHS 506
Query: 137 SALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGR-NV----------------- 178
S ++ G+ + VG SLIDMY KCG I +A K+ R R NV
Sbjct: 507 SIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQE 566
Query: 179 --VSWTAMVVGYVAAGDVVEAKKLFDGM 204
VSW +++ GYV +A+ LF M
Sbjct: 567 MCVSWNSIISGYVMKEQSEDAQMLFTRM 594
Score = 79.3 bits (194), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 92/191 (48%), Gaps = 5/191 (2%)
Query: 18 ATLLKACKRTEHLQ---QIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLS 74
A++L++C L+ Q+HA ++ D + + + + + + +F +
Sbjct: 285 ASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSEN 344
Query: 75 PTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGL-EGKS 133
+N +I + Q + L F R+ ++G D + V +AC A+ +GL EG
Sbjct: 345 LNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRAC-ALVKGLSEGLQ 403
Query: 134 VHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGD 193
++G A++ L DV V + IDMYGKC + +A +VFD M R+ VSW A++ + G
Sbjct: 404 IYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGK 463
Query: 194 VVEAKKLFDGM 204
E LF M
Sbjct: 464 GYETLFLFVSM 474
Score = 77.8 bits (190), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 77/175 (44%), Gaps = 5/175 (2%)
Query: 18 ATLLKACKRTEHLQ---QIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLS 74
A +LK C E QIH +++ G + D S + + S VF +
Sbjct: 184 AIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPE 243
Query: 75 PTTFLWNTLIKSHCQNSYFPATLSAFARM-KANGSVPDTYTYPLVIKACSAMCRGLEGKS 133
+ W+ +I QN+ L F M K N V + Y V+++C+A+ G
Sbjct: 244 KNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQS-IYASVLRSCAALSELRLGGQ 302
Query: 134 VHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGY 188
+H AL+ D V T+ +DMY KC + DA+ +FD N S+ AM+ GY
Sbjct: 303 LHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGY 357
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 63/125 (50%)
Query: 80 WNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSAL 139
WN+++ + QN ++ F M G D T+ +++K CS + G +HG +
Sbjct: 148 WNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVV 207
Query: 140 RCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKK 199
R G + DV ++L+DMY K ++ +VF + +N VSW+A++ G V + A K
Sbjct: 208 RVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALK 267
Query: 200 LFDGM 204
F M
Sbjct: 268 FFKEM 272
Score = 57.8 bits (138), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 43/94 (45%)
Query: 112 TYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFD 171
T + V K C+ GK H + G FV L+ +Y + A VFD
Sbjct: 48 TTNFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFD 107
Query: 172 RMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGMP 205
+M R+VVSW M+ GY + D+ +A F+ MP
Sbjct: 108 KMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMP 141
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 93/193 (48%), Gaps = 6/193 (3%)
Query: 18 ATLLKACKRTEH------LQQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSR 71
+ LL C+ +H ++++ I GL LI + L + + + +
Sbjct: 252 SVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETF 311
Query: 72 VLSPTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEG 131
++ F W +I N L F +M G VP+ T + ACS + +G
Sbjct: 312 GITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQG 371
Query: 132 KSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAA 191
VH A++ G +DV VG SL+DMY KCG++ DARKVFD + ++V +W +M+ GY A
Sbjct: 372 SEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQA 431
Query: 192 GDVVEAKKLFDGM 204
G +A +LF M
Sbjct: 432 GYCGKAYELFTRM 444
Score = 89.7 bits (221), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 100/203 (49%), Gaps = 21/203 (10%)
Query: 25 KRTEHLQQIHACI----IQRG----------LEQDQFLISNFISLAHSLSTIAYSTTVFS 70
KR+ +L+ + +CI I G E D F+ + +S+ IA + VF
Sbjct: 80 KRSTYLKLLESCIDSGSIHLGRILHARFGLFTEPDVFVETKLLSMYAKCGCIADARKVFD 139
Query: 71 RVLSPTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLE 130
+ F W+ +I ++ + + + F M +G +PD + +P +++ C A C +E
Sbjct: 140 SMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGC-ANCGDVE 198
Query: 131 -GKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYV 189
GK +H ++ G+ + V S++ +Y KCGE+ A K F RM R+V++W ++++ Y
Sbjct: 199 AGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYC 258
Query: 190 AAGDVVEAKKLF-----DGMPPG 207
G EA +L +G+ PG
Sbjct: 259 QNGKHEEAVELVKEMEKEGISPG 281
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 65/129 (50%)
Query: 76 TTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVH 135
T WN +I + QN L F +M+ + +P++ T ++ AC+ + + +H
Sbjct: 488 NTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIH 547
Query: 136 GSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVV 195
G LR L+ V +L D Y K G+I +R +F M +++++W +++ GYV G
Sbjct: 548 GCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYG 607
Query: 196 EAKKLFDGM 204
A LF+ M
Sbjct: 608 PALALFNQM 616
Score = 53.5 bits (127), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 81/186 (43%), Gaps = 15/186 (8%)
Query: 19 TLLKACKR---TEHLQQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSP 75
+LL AC + +++IH C+++R L+ + + I YS T+F + +
Sbjct: 529 SLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETK 588
Query: 76 TTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVH 135
WN+LI + + + L+ F +MK G P+ T +I A M EGK V
Sbjct: 589 DIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVF 648
Query: 136 GSALRCGLEEDVFV------GTSLIDMYGKCGEIGDARKVFDRMSGRNVVS-WTAMVVGY 188
S + D + ++++ +YG+ + +A + M+ ++ W + + G
Sbjct: 649 YS-----IANDYHIIPALEHCSAMVYLYGRANRLEEALQFIQEMNIQSETPIWESFLTGC 703
Query: 189 VAAGDV 194
GD+
Sbjct: 704 RIHGDI 709
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 103/186 (55%), Gaps = 4/186 (2%)
Query: 21 LKACKRTEHLQQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLW 80
L++C+ T + +IH +++ GL++D F +S ++ + L I Y++++F V + F++
Sbjct: 35 LRSCRDTVEVSRIHGYMVKTGLDKDDFAVSKLLAFSSVLD-IRYASSIFEHVSNTNLFMF 93
Query: 81 NTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACS-AMCRGLEGKSVHGSAL 139
NT+I+ + + S F +++A G D +++ +K+CS +C + G+ +HG AL
Sbjct: 94 NTMIRGYSISDEPERAFSVFNQLRAKGLTLDRFSFITTLKSCSRELCVSI-GEGLHGIAL 152
Query: 140 RCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRM-SGRNVVSWTAMVVGYVAAGDVVEAK 198
R G + +LI Y CG+I DARKVFD M + V+++ ++ GY+ A
Sbjct: 153 RSGFMVFTDLRNALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALAL 212
Query: 199 KLFDGM 204
LF M
Sbjct: 213 DLFRIM 218
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 83/176 (47%)
Query: 31 QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQN 90
+ H I+ GL+ D LI+ I + I+ + +F + WN +I + +
Sbjct: 247 ESAHVLCIKIGLDLDLHLITALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKT 306
Query: 91 SYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVG 150
+ +MK P++ T+ ++ +C+ G++V + D +G
Sbjct: 307 GLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVADLLEEERIALDAILG 366
Query: 151 TSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGMPP 206
T+L+DMY K G + A ++F+RM ++V SWTAM+ GY A G EA LF+ M
Sbjct: 367 TALVDMYAKVGLLEKAVEIFNRMKDKDVKSWTAMISGYGAHGLAREAVTLFNKMEE 422
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 61/126 (48%)
Query: 80 WNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSAL 139
++TL+ + Q S L F M+ + V + T + A S + +S H +
Sbjct: 195 FSTLMNGYLQVSKKALALDLFRIMRKSEVVVNVSTLLSFLSAISDLGDLSGAESAHVLCI 254
Query: 140 RCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKK 199
+ GL+ D+ + T+LI MYGK G I AR++FD ++VV+W M+ Y G + E
Sbjct: 255 KIGLDLDLHLITALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVW 314
Query: 200 LFDGMP 205
L M
Sbjct: 315 LLRQMK 320
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 99.0 bits (245), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/143 (39%), Positives = 82/143 (57%), Gaps = 6/143 (4%)
Query: 70 SRVLSPTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGL 129
S VL+ T + +N+ I + LS F+ M AN +PDT+T+P ++KAC+++ R
Sbjct: 5 SSVLNSTKY-FNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLS 63
Query: 130 EGKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYV 189
G S+H L G D ++ +SL+++Y K G + ARKVF+ M R+VV WTAM+ Y
Sbjct: 64 FGLSIHQQVLVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYS 123
Query: 190 AAGDVVEAKKL-----FDGMPPG 207
AG V EA L F G+ PG
Sbjct: 124 RAGIVGEACSLVNEMRFQGIKPG 146
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 80/174 (45%)
Query: 31 QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQN 90
+ +H I++ G + D L + I++ S V + + W +I +
Sbjct: 265 RMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRL 324
Query: 91 SYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVG 150
L F+ M +GS + V+ +C+ + G SVHG LR G D
Sbjct: 325 GRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPAL 384
Query: 151 TSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
SLI MY KCG + + +F+RM+ R++VSW A++ GY D+ +A LF+ M
Sbjct: 385 NSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEM 438
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 87/181 (48%), Gaps = 6/181 (3%)
Query: 33 IHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQNSY 92
+H +++ G D +++ I++ + S +F R+ WN +I + QN
Sbjct: 368 VHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVD 427
Query: 93 FPATLSAFARMKANG-SVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVGT 151
L F MK D++T +++ACS+ GK +H +R + V T
Sbjct: 428 LCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDT 487
Query: 152 SLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGY--VAAGDV---VEAKKLFDGMPP 206
+L+DMY KCG + A++ FD +S ++VVSW ++ GY GD+ + ++ L GM P
Sbjct: 488 ALVDMYSKCGYLEAAQRCFDSISWKDVVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEP 547
Query: 207 G 207
Sbjct: 548 N 548
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 84/185 (45%)
Query: 20 LLKACKRTEHLQQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFL 79
+L LQ +H + G + D ++++ ++L + + +F ++
Sbjct: 153 MLSGVLEITQLQCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVS 212
Query: 80 WNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSAL 139
WNT+I + L RM+ +G PD T+ + MC G+ +H +
Sbjct: 213 WNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIV 272
Query: 140 RCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKK 199
+ G + D+ + T+LI MY KCG+ + +V + + ++VV WT M+ G + G +A
Sbjct: 273 KTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALI 332
Query: 200 LFDGM 204
+F M
Sbjct: 333 VFSEM 337
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 98.6 bits (244), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 97/188 (51%), Gaps = 1/188 (0%)
Query: 18 ATLLKACK-RTEHLQQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPT 76
+ LL+A + + L++IHA +++ G + L++ + + + Y+ VF + P
Sbjct: 14 SELLRASSSKPKQLKKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPR 73
Query: 77 TFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHG 136
FLWNTL K + +N +L + +M+ G PD +TYP V+KA S + G ++H
Sbjct: 74 IFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHA 133
Query: 137 SALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVE 196
++ G V T L+ MY K GE+ A +F+ M +++V+W A + V G+
Sbjct: 134 HVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAI 193
Query: 197 AKKLFDGM 204
A + F+ M
Sbjct: 194 ALEYFNKM 201
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 80/172 (46%)
Query: 33 IHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQNSY 92
+HA +++ G + + + + ++ + +F + WN + Q
Sbjct: 131 LHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGN 190
Query: 93 FPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVGTS 152
L F +M A+ D++T ++ AC + G+ ++ A + ++ ++ V +
Sbjct: 191 SAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENA 250
Query: 153 LIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
+DM+ KCG AR +F+ M RNVVSW+ M+VGY GD EA LF M
Sbjct: 251 RLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTM 302
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 97.8 bits (242), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 97/192 (50%), Gaps = 7/192 (3%)
Query: 19 TLLKACKRTEHLQQIHACIIQRGLEQDQFLISNFISLAHSLST---IAYSTTVFSRVLSP 75
+LL+ CK HL+QI A +I GL D F S I+ +LS + YS + + +P
Sbjct: 58 SLLEKCKLLLHLKQIQAQMIINGLILDPFASSRLIAFC-ALSESRYLDYSVKILKGIENP 116
Query: 76 TTFLWNTLIKSHCQNSYFPATLSAFARMKANG---SVPDTYTYPLVIKACSAMCRGLEGK 132
F WN I+ ++ + + +M +G S PD +TYP++ K C+ + G
Sbjct: 117 NIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGH 176
Query: 133 SVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAG 192
+ G L+ LE V + I M+ CG++ +ARKVFD R++VSW ++ GY G
Sbjct: 177 MILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIG 236
Query: 193 DVVEAKKLFDGM 204
+ +A ++ M
Sbjct: 237 EAEKAIYVYKLM 248
Score = 81.6 bits (200), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 66/125 (52%)
Query: 80 WNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSAL 139
WN LI + + + + M++ G PD T ++ +CS + GK +
Sbjct: 225 WNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVK 284
Query: 140 RCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKK 199
GL + + +L+DM+ KCG+I +AR++FD + R +VSWT M+ GY G + ++K
Sbjct: 285 ENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRK 344
Query: 200 LFDGM 204
LFD M
Sbjct: 345 LFDDM 349
Score = 74.3 bits (181), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 66/140 (47%)
Query: 65 STTVFSRVLSPTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSA 124
S +F + LWN +I Q L+ F M+ + + PD T + ACS
Sbjct: 342 SRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQ 401
Query: 125 MCRGLEGKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAM 184
+ G +H + L +V +GTSL+DMY KCG I +A VF + RN +++TA+
Sbjct: 402 LGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAI 461
Query: 185 VVGYVAAGDVVEAKKLFDGM 204
+ G GD A F+ M
Sbjct: 462 IGGLALHGDASTAISYFNEM 481
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 97.8 bits (242), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 86/174 (49%)
Query: 31 QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQN 90
+Q+H C ++ G+ + F+ I + I + F + TT WN +I + +
Sbjct: 244 KQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALH 303
Query: 91 SYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVG 150
Y L M+ +G D +T ++I+ + + + K H S +R G E ++
Sbjct: 304 GYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIVAN 363
Query: 151 TSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
T+L+D Y K G + AR VFD++ +N++SW A++ GY G +A KLF+ M
Sbjct: 364 TALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEKM 417
Score = 81.3 bits (199), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 90/181 (49%), Gaps = 3/181 (1%)
Query: 20 LLKACKRTEHL---QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPT 76
L++AC R + + ++++ ++ G E +Q++++ + + I + +F +
Sbjct: 129 LVEACIRLKSIRCVKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFDEIPERN 188
Query: 77 TFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHG 136
+ + ++I + F M S +T+T+ ++++A + + GK +H
Sbjct: 189 LYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYVGKQLHV 248
Query: 137 SALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVE 196
AL+ G+ ++ FV LIDMY KCG+I DAR F+ M + V+W ++ GY G E
Sbjct: 249 CALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALHGYSEE 308
Query: 197 A 197
A
Sbjct: 309 A 309
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 54/91 (59%)
Query: 114 TYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRM 173
TY +++AC + K V+G + G E + ++ ++ M+ KCG I DAR++FD +
Sbjct: 125 TYDALVEACIRLKSIRCVKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFDEI 184
Query: 174 SGRNVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
RN+ S+ +++ G+V G+ VEA +LF M
Sbjct: 185 PERNLYSYYSIISGFVNFGNYVEAFELFKMM 215
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 97.8 bits (242), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 101/194 (52%), Gaps = 7/194 (3%)
Query: 20 LLKACKRTEHLQQIHACIIQRG-LEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTF 78
L ++C + Q+HA ++ G L +D ++ I + + S VF P +F
Sbjct: 7 LFRSCSSLRLVSQLHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAFPYPDSF 66
Query: 79 LWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLE-GKSVHGS 137
++ LIK + A + + R+ + + + +P V++AC+ L G VHG
Sbjct: 67 MYGVLIKCNVWCHLLDAAIDLYHRLVSETTQISKFVFPSVLRACAGSREHLSVGGKVHGR 126
Query: 138 ALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEA 197
++ G+++D + TSL+ MYG+ G + DA KVFD M R++V+W+ +V + G+VV+A
Sbjct: 127 IIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKA 186
Query: 198 KKLF-----DGMPP 206
++F DG+ P
Sbjct: 187 LRMFKCMVDDGVEP 200
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 81/175 (46%), Gaps = 2/175 (1%)
Query: 31 QQIHACIIQRGLEQD-QFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQ 89
+ +H ++R L+ + + L + L ++ TV V WN+LI +
Sbjct: 323 KSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAH 382
Query: 90 NSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFV 149
L F +M PD +T I AC GK +HG +R + D FV
Sbjct: 383 RGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVS-DEFV 441
Query: 150 GTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
SLIDMY K G + A VF+++ R+VV+W +M+ G+ G+ VEA LFD M
Sbjct: 442 QNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYM 496
Score = 85.5 bits (210), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 90/175 (51%), Gaps = 1/175 (0%)
Query: 31 QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQN 90
+ +H I ++ + D+ L ++ +++ + S +F ++ W +I S+ +
Sbjct: 222 RSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRG 281
Query: 91 SYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDV-FV 149
+ L +F+ M +G P+ T V+ +C + EGKSVHG A+R L+ + +
Sbjct: 282 EFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESL 341
Query: 150 GTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
+L+++Y +CG++ D V +S RN+V+W +++ Y G V++A LF M
Sbjct: 342 SLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQM 396
Score = 84.7 bits (208), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 90/174 (51%), Gaps = 4/174 (2%)
Query: 19 TLLKACKRT-EHLQ---QIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLS 74
++L+AC + EHL ++H II+ G++ D + ++ + + ++ + VF +
Sbjct: 105 SVLRACAGSREHLSVGGKVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPV 164
Query: 75 PTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSV 134
W+TL+ S +N L F M +G PD T V++ C+ + +SV
Sbjct: 165 RDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSV 224
Query: 135 HGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGY 188
HG R + D + SL+ MY KCG++ + ++F++++ +N VSWTAM+ Y
Sbjct: 225 HGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSY 278
Score = 78.2 bits (191), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 96/174 (55%), Gaps = 2/174 (1%)
Query: 31 QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQN 90
+QIH +I+ + D+F+ ++ I + ++ ++TVF+++ + WN+++ QN
Sbjct: 425 KQIHGHVIRTDV-SDEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQN 483
Query: 91 SYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVG 150
+S F M + + T+ VI+ACS++ +GK VH + GL+ D+F
Sbjct: 484 GNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGLK-DLFTD 542
Query: 151 TSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
T+LIDMY KCG++ A VF MS R++VSW++M+ Y G + A F+ M
Sbjct: 543 TALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQM 596
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 97.4 bits (241), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 77/148 (52%), Gaps = 1/148 (0%)
Query: 59 LSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVP-DTYTYPL 117
+ I + ++F R+ W +I + + +F F RM+ G V ++ T +
Sbjct: 221 MGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAV 280
Query: 118 VIKACSAMCRGLEGKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRN 177
+ KAC R EG +HG R LE D+F+G SL+ MY K G +G+A+ VF M ++
Sbjct: 281 MFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKD 340
Query: 178 VVSWTAMVVGYVAAGDVVEAKKLFDGMP 205
VSW +++ G V + EA +LF+ MP
Sbjct: 341 SVSWNSLITGLVQRKQISEAYELFEKMP 368
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 70/140 (50%)
Query: 62 IAYSTTVFSRVLSPTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKA 121
I+ +F + W +I + N Y+ L F +M P++YT+ V+ A
Sbjct: 388 ISKCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSA 447
Query: 122 CSAMCRGLEGKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSW 181
+++ +EG +HG ++ + D+ V SL+ MY KCG DA K+F +S N+VS+
Sbjct: 448 TASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSY 507
Query: 182 TAMVVGYVAAGDVVEAKKLF 201
M+ GY G +A KLF
Sbjct: 508 NTMISGYSYNGFGKKALKLF 527
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 37/57 (64%)
Query: 145 EDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLF 201
++V +S++ Y K G I DAR +FDRM+ RNV++WTAM+ GY AG + LF
Sbjct: 206 KEVVSCSSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLF 262
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 97.1 bits (240), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 102/207 (49%), Gaps = 25/207 (12%)
Query: 21 LKACKRTEHLQQIHACIIQRGLEQDQFLISNFI------SLAHSLSTIAYSTTVFSRVLS 74
+ C+ L QIHA I+ G +D + + L H + Y+ +F+++
Sbjct: 30 INNCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHR--DLDYAHKIFNQMPQ 87
Query: 75 PTTFLWNTLIKSHCQNSYFPA--TLSAFARMKANGSV-PDTYTYPLVIKACSAMCRGLEG 131
F WNT+I+ ++ A ++ F M ++ V P+ +T+P V+KAC+ + EG
Sbjct: 88 RNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEG 147
Query: 132 KSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDR---------MSGR-----N 177
K +HG AL+ G D FV ++L+ MY CG + DAR +F + M+ R
Sbjct: 148 KQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGE 207
Query: 178 VVSWTAMVVGYVAAGDVVEAKKLFDGM 204
+V W M+ GY+ GD A+ LFD M
Sbjct: 208 IVLWNVMIDGYMRLGDCKAARMLFDKM 234
Score = 82.8 bits (203), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 96/229 (41%), Gaps = 51/229 (22%)
Query: 19 TLLKACKRTEHLQ---QIHACIIQRGLEQDQFLISNFISLA------------------- 56
++LKAC +T +Q QIH ++ G D+F++SN + +
Sbjct: 133 SVLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIE 192
Query: 57 --------------------------HSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQN 90
L + +F ++ + WNT+I + N
Sbjct: 193 KDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLN 252
Query: 91 SYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVG 150
+F + F MK P+ T V+ A S + G+ +H A G+ D +G
Sbjct: 253 GFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLG 312
Query: 151 TSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYV---AAGDVVE 196
++LIDMY KCG I A VF+R+ NV++W+AM+ G+ AGD ++
Sbjct: 313 SALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAID 361
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 97.1 bits (240), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 87/190 (45%), Gaps = 4/190 (2%)
Query: 19 TLLKACKRTEHLQQ---IHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSP 75
L +C+ E L Q IH+ I G +QD I+ FIS+ + +F + S
Sbjct: 261 NLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSR 320
Query: 76 TTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVH 135
T W +I + + L+ F M +G PD T +I C GK +
Sbjct: 321 TCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWID 380
Query: 136 GSALRCGLEED-VFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDV 194
A G + D V + +LIDMY KCG I +AR +FD + VV+WT M+ GY G
Sbjct: 381 ARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIF 440
Query: 195 VEAKKLFDGM 204
+EA KLF M
Sbjct: 441 LEALKLFSKM 450
Score = 84.7 bits (208), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 89/185 (48%), Gaps = 5/185 (2%)
Query: 22 KACKRTEHL---QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTF 78
KAC R + + +HA +I+ D F+ + + + +++ Y+ VF R+
Sbjct: 60 KACARLADVGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDAT 119
Query: 79 LWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSA 138
WN ++ CQ+ + S F M+ N PD+ T +I++ S +++H
Sbjct: 120 TWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVG 179
Query: 139 LRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMS--GRNVVSWTAMVVGYVAAGDVVE 196
+R G++ V V + I YGKCG++ A+ VF+ + R VVSW +M Y G+ +
Sbjct: 180 IRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFD 239
Query: 197 AKKLF 201
A L+
Sbjct: 240 AFGLY 244
Score = 84.0 bits (206), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 65/125 (52%)
Query: 80 WNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSAL 139
WN I+ + +L F MK G P+ +T+P V KAC+ + + VH +
Sbjct: 20 WNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHLI 79
Query: 140 RCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKK 199
+ DVFVGT+ +DM+ KC + A KVF+RM R+ +W AM+ G+ +G +A
Sbjct: 80 KSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFS 139
Query: 200 LFDGM 204
LF M
Sbjct: 140 LFREM 144
Score = 73.6 bits (179), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 84/185 (45%), Gaps = 8/185 (4%)
Query: 25 KRTEHLQQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVL--SPTTFLWNT 82
K + L+ +HA I+ G++ + + +IS + + VF + T WN+
Sbjct: 167 KSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNS 226
Query: 83 LIKSHCQNSYFPATLSAFAR---MKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSAL 139
+ K++ S F AF M PD T+ + +C +G+ +H A+
Sbjct: 227 MFKAY---SVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAI 283
Query: 140 RCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKK 199
G ++D+ + I MY K + AR +FD M+ R VSWT M+ GY GD+ EA
Sbjct: 284 HLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALA 343
Query: 200 LFDGM 204
LF M
Sbjct: 344 LFHAM 348
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 96.7 bits (239), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 98/191 (51%), Gaps = 3/191 (1%)
Query: 18 ATLLKACK---RTEHLQQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLS 74
A +LK+C L+Q+H +++ G + L ++ + + ++ + VF +++
Sbjct: 166 AGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVN 225
Query: 75 PTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSV 134
P+ WN +++ + + + + F +M P +T V+ ACS GK +
Sbjct: 226 PSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVI 285
Query: 135 HGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDV 194
H A++ + D V TS+ DMY KC + AR+VFD+ +++ SWT+ + GY +G
Sbjct: 286 HAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLT 345
Query: 195 VEAKKLFDGMP 205
EA++LFD MP
Sbjct: 346 REARELFDLMP 356
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 58/126 (46%), Gaps = 1/126 (0%)
Query: 80 WNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSAL 139
WN ++ + + L M+ D T ++ CS + GK HG
Sbjct: 363 WNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFIY 422
Query: 140 RCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSG-RNVVSWTAMVVGYVAAGDVVEAK 198
R G + +V V +L+DMYGKCG + A F +MS R+ VSW A++ G G +A
Sbjct: 423 RHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQAL 482
Query: 199 KLFDGM 204
F+GM
Sbjct: 483 SFFEGM 488
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 63/125 (50%)
Query: 80 WNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSAL 139
WN +I + QN F RM +G ++ V+K+C + + +H + +
Sbjct: 130 WNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSCGLILDLRLLRQLHCAVV 189
Query: 140 RCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKK 199
+ G +V + TS++D+YGKC + DAR+VFD + + VSW +V Y+ G EA
Sbjct: 190 KYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVV 249
Query: 200 LFDGM 204
+F M
Sbjct: 250 MFFKM 254
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 86/197 (43%), Gaps = 12/197 (6%)
Query: 20 LLKACKRTEHLQ---QIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSP- 75
+L C +Q Q H I + G + + + + + + T+ S ++ R +S
Sbjct: 401 ILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQ-SANIWFRQMSEL 459
Query: 76 -TTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSV 134
WN L+ + LS F M+ P YT ++ C+ + GK++
Sbjct: 460 RDEVSWNALLTGVARVGRSEQALSFFEGMQVEAK-PSKYTLATLLAGCANIPALNLGKAI 518
Query: 135 HGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDV 194
HG +R G + DV + +++DMY KC A +VF + R+++ W +++ G G
Sbjct: 519 HGFLIRDGYKIDVVIRGAMVDMYSKCRCFDYAIEVFKEAATRDLILWNSIIRGCCRNGRS 578
Query: 195 VEAKKLF-----DGMPP 206
E +LF +G+ P
Sbjct: 579 KEVFELFMLLENEGVKP 595
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 96.7 bits (239), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 97/187 (51%), Gaps = 4/187 (2%)
Query: 19 TLLKACKRTEHLQQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTF 78
TL + C + + +HA ++ Q+ + + ++L L +A + F + + +
Sbjct: 59 TLFRYCTNLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVY 118
Query: 79 LWNTLIKSHCQNSYFPATLSAFAR-MKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGS 137
WN +I + + + F+ M ++G PD T+P V+KAC + ++G +H
Sbjct: 119 AWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTV---IDGNKIHCL 175
Query: 138 ALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEA 197
AL+ G DV+V SLI +Y + +G+AR +FD M R++ SW AM+ GY +G+ EA
Sbjct: 176 ALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEA 235
Query: 198 KKLFDGM 204
L +G+
Sbjct: 236 LTLSNGL 242
Score = 87.0 bits (214), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 91/186 (48%), Gaps = 4/186 (2%)
Query: 19 TLLKACKRTEHLQQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTF 78
++LKAC+ +IH ++ G D ++ ++ I L + + +F +
Sbjct: 158 SVLKACRTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMG 217
Query: 79 LWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSA 138
WN +I +CQ+ L+ ++A SV T ++ AC+ G ++H +
Sbjct: 218 SWNAMISGYCQSGNAKEALTLSNGLRAMDSV----TVVSLLSACTEAGDFNRGVTIHSYS 273
Query: 139 LRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAK 198
++ GLE ++FV LID+Y + G + D +KVFDRM R+++SW +++ Y + A
Sbjct: 274 IKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAI 333
Query: 199 KLFDGM 204
LF M
Sbjct: 334 SLFQEM 339
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 89/190 (46%), Gaps = 4/190 (2%)
Query: 19 TLLKACKRTEHLQQ---IHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSP 75
+LL AC + IH+ I+ GLE + F+ + I L + VF R+
Sbjct: 252 SLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVR 311
Query: 76 TTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVH 135
WN++IK++ N +S F M+ + PD T + S + +SV
Sbjct: 312 DLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQ 371
Query: 136 GSALRCG-LEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDV 194
G LR G ED+ +G +++ MY K G + AR VF+ + +V+SW ++ GY G
Sbjct: 372 GFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFA 431
Query: 195 VEAKKLFDGM 204
EA ++++ M
Sbjct: 432 SEAIEMYNIM 441
Score = 81.6 bits (200), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 91/194 (46%), Gaps = 8/194 (4%)
Query: 19 TLLKACKRTEHLQQIHAC------IIQRGLEQDQFLISNFISLAHS-LSTIAYSTTVFSR 71
TL+ L I AC +++G + I N + + ++ L + + VF+
Sbjct: 350 TLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNW 409
Query: 72 VLSPTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVP-DTYTYPLVIKACSAMCRGLE 130
+ + WNT+I + QN + + + M+ G + + T+ V+ ACS +
Sbjct: 410 LPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQ 469
Query: 131 GKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVA 190
G +HG L+ GL DVFV TSL DMYGKCG + DA +F ++ N V W ++ +
Sbjct: 470 GMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGF 529
Query: 191 AGDVVEAKKLFDGM 204
G +A LF M
Sbjct: 530 HGHGEKAVMLFKEM 543
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 89/201 (44%), Gaps = 19/201 (9%)
Query: 19 TLLKACKRTEHLQQ---IHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSP 75
++L AC + L+Q +H +++ GL D F++++ + + + ++F ++
Sbjct: 456 SVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRV 515
Query: 76 TTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVH 135
+ WNTLI H + + + F M G PD T+ ++ ACS G
Sbjct: 516 NSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSH-----SGLVDE 570
Query: 136 GSALRCGLEEDVFVGTSL------IDMYGKCGEIGDARKVFDRMSGRNVVS-WTAMVVGY 188
G ++ D + SL +DMYG+ G++ A K MS + S W A++
Sbjct: 571 GQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSAC 630
Query: 189 VAAGDV----VEAKKLFDGMP 205
G+V + ++ LF+ P
Sbjct: 631 RVHGNVDLGKIASEHLFEVEP 651
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 96.3 bits (238), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 95/193 (49%), Gaps = 6/193 (3%)
Query: 18 ATLLKACKRTEHLQ---QIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLS 74
+T+L AC L+ QIHA I++ GLE D L++ I + + +F+ + +
Sbjct: 253 STVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPN 312
Query: 75 PTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSV 134
W TL+ + QN+ + F M G PD Y ++ +C+++ G V
Sbjct: 313 KNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQV 372
Query: 135 HGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAG-- 192
H ++ L D +V SLIDMY KC + DARKVFD + +VV + AM+ GY G
Sbjct: 373 HAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQ 432
Query: 193 -DVVEAKKLFDGM 204
++ EA +F M
Sbjct: 433 WELHEALNIFRDM 445
Score = 95.1 bits (235), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 85/173 (49%)
Query: 32 QIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQNS 91
Q+ + +++ G ++D ++ + I I Y+ VF + +T W T+I +
Sbjct: 169 QLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMG 228
Query: 92 YFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVGT 151
+L F ++ + VPD Y V+ ACS + GK +H LR GLE D +
Sbjct: 229 RSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMN 288
Query: 152 SLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
LID Y KCG + A K+F+ M +N++SWT ++ GY EA +LF M
Sbjct: 289 VLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSM 341
Score = 91.3 bits (225), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 85/174 (48%)
Query: 31 QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQN 90
+QIH + + GL D F S I + + + S VF + +WN++ + Q
Sbjct: 474 KQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQ 533
Query: 91 SYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVG 150
S L+ F ++ + PD +T+ ++ A + G+ H L+ GLE + ++
Sbjct: 534 SENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYIT 593
Query: 151 TSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
+L+DMY KCG DA K FD + R+VV W +++ Y G+ +A ++ + M
Sbjct: 594 NALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKM 647
Score = 85.5 bits (210), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 90/189 (47%), Gaps = 12/189 (6%)
Query: 21 LKACKRTEHLQQI-HACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFL 79
L+A H Q + H II GLE D +L + I+L + Y+ VF ++
Sbjct: 53 LRASDDLLHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVS 112
Query: 80 WNTLIKSHCQNSYFPATLSAFARM-KANGSVPDTYTYPLVIKACSAMCRGLEGK------ 132
W+T++ + + + +L F + P+ Y I+ACS GL+G+
Sbjct: 113 WSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACS----GLDGRGRWMVF 168
Query: 133 SVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAG 192
+ ++ G + DV+VGT LID Y K G I AR VFD + ++ V+WT M+ G V G
Sbjct: 169 QLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMG 228
Query: 193 DVVEAKKLF 201
+ +LF
Sbjct: 229 RSYVSLQLF 237
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 91/190 (47%), Gaps = 6/190 (3%)
Query: 18 ATLLKACKRTEHL---QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLS 74
+++L +C L Q+HA I+ L D ++ ++ I + + + VF +
Sbjct: 354 SSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAA 413
Query: 75 PTTFLWNTLIKSHCQ---NSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEG 131
L+N +I+ + + L+ F M+ P T+ +++A +++
Sbjct: 414 ADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLS 473
Query: 132 KSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAA 191
K +HG + GL D+F G++LID+Y C + D+R VFD M +++V W +M GYV
Sbjct: 474 KQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQ 533
Query: 192 GDVVEAKKLF 201
+ EA LF
Sbjct: 534 SENEEALNLF 543
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 96.3 bits (238), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 92/185 (49%), Gaps = 2/185 (1%)
Query: 20 LLKACKRTEHLQQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFL 79
++K C + L+ A +I+ L QD L++ FI+ S + + + +++ P F+
Sbjct: 779 IIKQCSTPKLLESALAAMIKTSLNQDCRLMNQFITACTSFKRLDLAVSTMTQMQEPNVFV 838
Query: 80 WNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSAL 139
+N L K S+ +L + RM + P +YTY ++KA S R G+S+
Sbjct: 839 YNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKASSFASRF--GESLQAHIW 896
Query: 140 RCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKK 199
+ G V + T+LID Y G I +ARKVFD M R+ ++WT MV Y D+ A
Sbjct: 897 KFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPERDDIAWTTMVSAYRRVLDMDSANS 956
Query: 200 LFDGM 204
L + M
Sbjct: 957 LANQM 961
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 77/146 (52%)
Query: 59 LSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLV 118
L + + ++F+++ W T+IK + QN + ++ F +M G +PD T V
Sbjct: 979 LGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTV 1038
Query: 119 IKACSAMCRGLEGKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNV 178
I AC+ + GK VH L+ G DV++G++L+DMY KCG + A VF + +N+
Sbjct: 1039 ISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNL 1098
Query: 179 VSWTAMVVGYVAAGDVVEAKKLFDGM 204
W +++ G A G EA K+F M
Sbjct: 1099 FCWNSIIEGLAAHGFAQEALKMFAKM 1124
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/192 (21%), Positives = 86/192 (44%), Gaps = 5/192 (2%)
Query: 18 ATLLKACKRTEHLQ---QIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLS 74
+T++ AC L+ ++H +Q G D ++ S + + ++ + VF +
Sbjct: 1036 STVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPK 1095
Query: 75 PTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSV 134
F WN++I+ + + L FA+M+ P+ T+ V AC+ EG+ +
Sbjct: 1096 KNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRI 1155
Query: 135 HGSAL-RCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGR-NVVSWTAMVVGYVAAG 192
+ S + + +V ++ ++ K G I +A ++ M N V W A++ G
Sbjct: 1156 YRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLDGCRIHK 1215
Query: 193 DVVEAKKLFDGM 204
++V A+ F+ +
Sbjct: 1216 NLVIAEIAFNKL 1227
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 95.5 bits (236), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 90/177 (50%), Gaps = 3/177 (1%)
Query: 19 TLLKACKRTEHLQQ---IHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSP 75
TL+ AC + + + +H +I+RG D L+++ ++ + +F +
Sbjct: 168 TLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEK 227
Query: 76 TTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVH 135
W+T+I + QN L F M +G+ P+ T V++AC+A +G+ H
Sbjct: 228 DVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTH 287
Query: 136 GSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAG 192
A+R GLE +V V T+L+DMY KC +A VF R+ ++VVSW A++ G+ G
Sbjct: 288 ELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNG 344
Score = 88.2 bits (217), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 76/138 (55%), Gaps = 1/138 (0%)
Query: 68 VFSRVLSPTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCR 127
+F + + + WNTL+KS + + L F+ M + PD +T P+ +KAC +
Sbjct: 16 MFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGELRE 75
Query: 128 GLEGKSVHGSALR-CGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVV 186
G+ +HG + L D++VG+SLI MY KCG + +A ++FD + ++V+W++MV
Sbjct: 76 VNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVS 135
Query: 187 GYVAAGDVVEAKKLFDGM 204
G+ G +A + F M
Sbjct: 136 GFEKNGSPYQAVEFFRRM 153
Score = 85.5 bits (210), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 93/189 (49%), Gaps = 4/189 (2%)
Query: 20 LLKACKRTEHLQQ---IHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPT 76
+L+AC L+Q H I++GLE + + + + + + + VFSR+
Sbjct: 270 VLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKD 329
Query: 77 TFLWNTLIKSHCQNSYFPATLSAFARMK-ANGSVPDTYTYPLVIKACSAMCRGLEGKSVH 135
W LI N ++ F+ M N + PD V+ +CS + + K H
Sbjct: 330 VVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFH 389
Query: 136 GSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVV 195
++ G + + F+G SL+++Y +CG +G+A KVF+ ++ ++ V WT+++ GY G
Sbjct: 390 SYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGT 449
Query: 196 EAKKLFDGM 204
+A + F+ M
Sbjct: 450 KALETFNHM 458
Score = 70.1 bits (170), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 88/189 (46%), Gaps = 5/189 (2%)
Query: 21 LKAC---KRTEHLQQIHACIIQR-GLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPT 76
LKAC + + + IH + + L D ++ S+ I + + + +F + P
Sbjct: 67 LKACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPD 126
Query: 77 TFLWNTLIKSHCQNSYFPATLSAFARM-KANGSVPDTYTYPLVIKACSAMCRGLEGKSVH 135
W++++ +N + F RM A+ PD T ++ AC+ + G+ VH
Sbjct: 127 IVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVH 186
Query: 136 GSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVV 195
G +R G D+ + SL++ Y K +A +F ++ ++V+SW+ ++ YV G
Sbjct: 187 GFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAA 246
Query: 196 EAKKLFDGM 204
EA +F+ M
Sbjct: 247 EALLVFNDM 255
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 95.5 bits (236), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 84/161 (52%)
Query: 32 QIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQNS 91
Q+H II+ G ++++ ++ I+ + I S VF + +W L+ + N
Sbjct: 246 QVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNK 305
Query: 92 YFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVGT 151
LS F+ M N +P+ T+ + +CSA+ GK +HG A++ GLE D FVG
Sbjct: 306 KHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGN 365
Query: 152 SLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAG 192
SL+ MY G + DA VF ++ +++VSW +++VG G
Sbjct: 366 SLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHG 406
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 58/137 (42%)
Query: 68 VFSRVLSPTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCR 127
+F ++ W T+I QN L F M + + VI AC+
Sbjct: 181 LFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPA 240
Query: 128 GLEGKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVG 187
G VHG ++ G + +V SLI Y C IGD+RKVFD V WTA++ G
Sbjct: 241 FHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSG 300
Query: 188 YVAAGDVVEAKKLFDGM 204
Y +A +F GM
Sbjct: 301 YSLNKKHEDALSIFSGM 317
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 84/173 (48%), Gaps = 5/173 (2%)
Query: 31 QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQN 90
+++H ++ GLE D F+ ++ + + + + +VF ++ + WN++I Q+
Sbjct: 346 KEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQH 405
Query: 91 SYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLE-GKSV--HGSALRCGLEEDV 147
F +M PD T+ ++ ACS C LE G+ + + S+ ++ +
Sbjct: 406 GRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSH-CGFLEKGRKLFYYMSSGINHIDRKI 464
Query: 148 FVGTSLIDMYGKCGEIGDARKVFDRMSGR-NVVSWTAMVVGYVAAGDVVEAKK 199
T ++D+ G+CG++ +A ++ +RM + N + W A++ DV +K
Sbjct: 465 QHYTCMVDILGRCGKLKEAEELIERMVVKPNEMVWLALLSACRMHSDVDRGEK 517
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 38/60 (63%)
Query: 146 DVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGMP 205
DV S+I +CG++ A K+FD M R+VVSWTAMV G +G V +A++LF MP
Sbjct: 96 DVVSWNSMISGCVECGDMNTAVKLFDEMPERSVVSWTAMVNGCFRSGKVDQAERLFYQMP 155
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 33/55 (60%)
Query: 151 TSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGMP 205
T +I Y + + DA +FD M R+VVSW +M+ G V GD+ A KLFD MP
Sbjct: 70 TKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEMP 124
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 95.5 bits (236), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 100/190 (52%), Gaps = 7/190 (3%)
Query: 18 ATLLKACKRTEHLQQIHACIIQRGLE-QDQFLISNF-ISLAH-SLSTIAYSTTVFSRVLS 74
A L+ + + + QIHA I++ L ++ + N + A+ S I +S +F + +
Sbjct: 33 AVLIDKSQSVDEVLQIHAAILRHNLLLHPRYPVLNLKLHRAYASHGKIRHSLALFHQTID 92
Query: 75 PTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSV 134
P FL+ I + N + ++ ++ P+ +T+ ++K+CS GK +
Sbjct: 93 PDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCSTKS----GKLI 148
Query: 135 HGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDV 194
H L+ GL D +V T L+D+Y K G++ A+KVFDRM R++VS TAM+ Y G+V
Sbjct: 149 HTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNV 208
Query: 195 VEAKKLFDGM 204
A+ LFD M
Sbjct: 209 EAARALFDSM 218
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 97/219 (44%), Gaps = 33/219 (15%)
Query: 18 ATLLKACKRTEHLQQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSR-----V 72
++LLK+C T+ + IH +++ GL D ++ + + + + + VF R +
Sbjct: 134 SSLLKSCS-TKSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSL 192
Query: 73 LSPTTFL--------------------------WNTLIKSHCQNSYFPATLSAFARMKAN 106
+S T + WN +I + Q+ + L F ++ A
Sbjct: 193 VSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAE 252
Query: 107 GS-VPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGD 165
G PD T + ACS + G+ +H + +V V T LIDMY KCG + +
Sbjct: 253 GKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEE 312
Query: 166 ARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
A VF+ +++V+W AM+ GY G +A +LF+ M
Sbjct: 313 AVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEM 351
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 95.5 bits (236), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 88/173 (50%)
Query: 32 QIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQNS 91
Q+H+ +++ G + I++ + Y+ VF + FL T++ ++ Q+
Sbjct: 258 QVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDK 317
Query: 92 YFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVGT 151
F L+ F++M P+ YT+ +++ + + + +G +HG L+ G V VG
Sbjct: 318 SFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGN 377
Query: 152 SLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
+L++MY K G I DARK F M+ R++V+W M+ G G EA + FD M
Sbjct: 378 ALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRM 430
Score = 67.0 bits (162), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 87/186 (46%), Gaps = 9/186 (4%)
Query: 20 LLKACKRTEHL---QQIHACII---QRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVL 73
LLK C + +L + IHA +I Q +D + I++ I+L + +F +
Sbjct: 37 LLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFDLMP 96
Query: 74 SPTTFLWNTLIKSHCQNSYFP-ATLSAFARMKANG-SVPDTYTYPLVIKACSAMCRGLEG 131
W ++K + QNS F L F M +G S P+ + +V K+CS R EG
Sbjct: 97 ERNVVSWCAMMKGY-QNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEEG 155
Query: 132 KSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAA 191
K HG L+ GL FV +L+ MY C G+A +V D + ++ +++ + GY+
Sbjct: 156 KQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLEC 215
Query: 192 GDVVEA 197
G E
Sbjct: 216 GAFKEG 221
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 49/90 (54%), Gaps = 3/90 (3%)
Query: 118 VIKACSAMCRGLEGKSVHGSAL---RCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMS 174
++K C+ G+S+H + + ED + SLI++Y KC E ARK+FD M
Sbjct: 37 LLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFDLMP 96
Query: 175 GRNVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
RNVVSW AM+ GY +G E KLF M
Sbjct: 97 ERNVVSWCAMMKGYQNSGFDFEVLKLFKSM 126
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 95.5 bits (236), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 96/195 (49%), Gaps = 8/195 (4%)
Query: 18 ATLLKACKRTEHL---QQIHACIIQRGLEQDQFLIS---NFISLAHSLSTIAYSTTVFSR 71
A++L A +HL +Q H +I+ G Q+ + S +F S + S VF
Sbjct: 244 ASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQE 303
Query: 72 VLSPTTFLWNTLIKSHCQNSYF-PATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLE 130
+LSP +WNT+I + N + +F +M+ G PD ++ V ACS + +
Sbjct: 304 ILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQ 363
Query: 131 GKSVHGSALRCGLEED-VFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYV 189
K +HG A++ + + + V +LI +Y K G + DAR VFDRM N VS+ M+ GY
Sbjct: 364 CKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYA 423
Query: 190 AAGDVVEAKKLFDGM 204
G EA L+ M
Sbjct: 424 QHGHGTEALLLYQRM 438
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 84/177 (47%), Gaps = 4/177 (2%)
Query: 24 CKRTEHLQQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFL-WNT 82
C R + ++Q+H + G + + + F++ + + +VF + + WN+
Sbjct: 151 CDRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNS 210
Query: 83 LIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCG 142
+I ++ Q+ L+ + M G D +T V+ A +++ + G+ HG ++ G
Sbjct: 211 MIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAG 270
Query: 143 LEEDVFVGTSLIDMYGKCG---EIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVE 196
++ VG+ LID Y KCG + D+ KVF + ++V W M+ GY ++ E
Sbjct: 271 FHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSE 327
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 76/158 (48%), Gaps = 3/158 (1%)
Query: 31 QQIHACIIQRGLEQDQFLISN-FISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQ 89
+QIH I+ + ++ ++N ISL + + + VF R+ +N +IK + Q
Sbjct: 365 KQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQ 424
Query: 90 NSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRC-GLEEDVF 148
+ + L + RM +G P+ T+ V+ AC+ + EG+ + +E +
Sbjct: 425 HGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAE 484
Query: 149 VGTSLIDMYGKCGEIGDARKVFDRMSGR-NVVSWTAMV 185
+ +ID+ G+ G++ +A + D M + V+W A++
Sbjct: 485 HYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALL 522
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 66/147 (44%), Gaps = 5/147 (3%)
Query: 60 STIAYSTTVFSRVLSPTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVI 119
S I + +F + P T +NTLI + A + F RM+ G D +T +I
Sbjct: 88 SKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGLI 147
Query: 120 KACSAMCRGLEG-KSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSG-RN 177
AC C ++ K +H ++ G + V + + Y K G + +A VF M R+
Sbjct: 148 AAC---CDRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRD 204
Query: 178 VVSWTAMVVGYVAAGDVVEAKKLFDGM 204
VSW +M+V Y + +A L+ M
Sbjct: 205 EVSWNSMIVAYGQHKEGAKALALYKEM 231
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 95.5 bits (236), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 93/189 (49%), Gaps = 4/189 (2%)
Query: 20 LLKACKRTEHL---QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPT 76
+L C R L +++H I + L D F+ + + + ++ + VFS +
Sbjct: 403 VLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKD 462
Query: 77 TFLWNTLIKSHCQNSYFPATLSAFARMKANGSV-PDTYTYPLVIKACSAMCRGLEGKSVH 135
WNT+I + +N Y LS F + PD T V+ AC+++ +G+ +H
Sbjct: 463 IISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIH 522
Query: 136 GSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVV 195
G +R G D V SL+DMY KCG + A +FD ++ +++VSWT M+ GY G
Sbjct: 523 GYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGK 582
Query: 196 EAKKLFDGM 204
EA LF+ M
Sbjct: 583 EAIALFNQM 591
Score = 88.6 bits (218), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 86/177 (48%), Gaps = 2/177 (1%)
Query: 31 QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQN 90
+Q+H I++ G + + ++ ++ + + VF + WN++I + N
Sbjct: 215 EQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSN 274
Query: 91 SYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALR-CGLEEDVFV 149
LS F +M +G D T V C+ G++VH ++ C ED F
Sbjct: 275 GLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFC 334
Query: 150 GTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGMPP 206
T L+DMY KCG++ A+ VF MS R+VVS+T+M+ GY G EA KLF+ M
Sbjct: 335 NT-LLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEE 390
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 83/166 (50%), Gaps = 11/166 (6%)
Query: 38 IQRGLEQDQFLISNFISLAHSLST-----------IAYSTTVFSRVLSPTTFLWNTLIKS 86
++ G E D F+ N + +L + + ++ VF V WN L+
Sbjct: 110 LKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNE 169
Query: 87 HCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEED 146
++ F ++ F +M ++G D+YT+ V K+ S++ G+ +HG L+ G E
Sbjct: 170 LAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGER 229
Query: 147 VFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAG 192
VG SL+ Y K + ARKVFD M+ R+V+SW +++ GYV+ G
Sbjct: 230 NSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNG 275
Score = 73.9 bits (180), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 76/172 (44%)
Query: 31 QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQN 90
+ +H+ ++ ++ + + + + + VF + + + ++I + +
Sbjct: 316 RAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYARE 375
Query: 91 SYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVG 150
+ F M+ G PD YT V+ C+ EGK VH L D+FV
Sbjct: 376 GLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVS 435
Query: 151 TSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFD 202
+L+DMY KCG + +A VF M ++++SW ++ GY EA LF+
Sbjct: 436 NALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFN 487
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 95.5 bits (236), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 67/126 (53%)
Query: 68 VFSRVLSPTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCR 127
+F + TT W LI + Q A L F +M+ + D T+ V+KA ++
Sbjct: 408 IFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFAS 467
Query: 128 GLEGKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVG 187
L GK +H +R G E+VF G+ L+DMY KCG I DA +VF+ M RN VSW A++
Sbjct: 468 LLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISA 527
Query: 188 YVAAGD 193
+ GD
Sbjct: 528 HADNGD 533
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 77/174 (44%)
Query: 31 QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQN 90
QQ+HA + G +D + + + + + +F + +N +I S+ Q
Sbjct: 270 QQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQA 329
Query: 91 SYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVG 150
+ A+L F M+ G + + ++ + + G+ +H AL + + VG
Sbjct: 330 DQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVG 389
Query: 151 TSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
SL+DMY KC +A +F + R VSWTA++ GYV G KLF M
Sbjct: 390 NSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKM 443
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 88/191 (46%), Gaps = 5/191 (2%)
Query: 19 TLLKACKRT---EHLQQIHACIIQRGLEQDQFL-ISNFISLAH-SLSTIAYSTTVFSRVL 73
TLL C + Q+HA ++ G + + FL +SN + ++ + + + +F +
Sbjct: 152 TLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIP 211
Query: 74 SPTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKS 133
+ +NTLI + ++ + ++ F +M+ +G P +T+ V+KA + G+
Sbjct: 212 EKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQ 271
Query: 134 VHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGD 193
+H ++ G D VG ++D Y K + + R +FD M + VS+ ++ Y A
Sbjct: 272 LHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQ 331
Query: 194 VVEAKKLFDGM 204
+ F M
Sbjct: 332 YEASLHFFREM 342
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 82/174 (47%), Gaps = 7/174 (4%)
Query: 18 ATLLKACKRTEHL---QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLS 74
AT+LKA L +Q+HA II+ G ++ F S + + +I + VF +
Sbjct: 456 ATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPD 515
Query: 75 PTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSV 134
WN LI +H N A + AFA+M +G PD+ + V+ ACS C +E +
Sbjct: 516 RNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACS-HCGFVEQGTE 574
Query: 135 HGSALR--CGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGR-NVVSWTAMV 185
+ A+ G+ ++D+ G+ G +A K+ D M + + W++++
Sbjct: 575 YFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVL 628
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%)
Query: 129 LEGKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGY 188
L+ + V ++ G + D +++ + G++ ARKV+D M +N VS M+ G+
Sbjct: 30 LDTRRVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGH 89
Query: 189 VAAGDVVEAKKLFDGMP 205
V GDV A+ LFD MP
Sbjct: 90 VKTGDVSSARDLFDAMP 106
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 95.1 bits (235), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 99/198 (50%), Gaps = 8/198 (4%)
Query: 18 ATLLKACKRTEHL---QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLS 74
+ +LKAC ++ ++ + +HA ++ L ++ S+ + + + I S VFS +
Sbjct: 112 SVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPF 171
Query: 75 PTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSV 134
W +I + L+ F+ M + + DTYT+ + +KAC+ + + GK++
Sbjct: 172 RNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAI 231
Query: 135 HGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDV 194
H + G + V SL MY +CGE+ D +F+ MS R+VVSWT+++V Y G
Sbjct: 232 HTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQE 291
Query: 195 VEAKKLFDGM-----PPG 207
V+A + F M PP
Sbjct: 292 VKAVETFIKMRNSQVPPN 309
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 90/188 (47%), Gaps = 3/188 (1%)
Query: 18 ATLLKACKRTEHL---QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLS 74
A++ AC L +Q+H ++ GL + ++ + + + + ++ +F +
Sbjct: 314 ASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRC 373
Query: 75 PTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSV 134
W+T+I +CQ + F+ M+ +G+ P + ++ M G+ V
Sbjct: 374 RDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQV 433
Query: 135 HGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDV 194
H AL GLE++ V +SLI+MY KCG I +A +F ++VS TAM+ GY G
Sbjct: 434 HALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKS 493
Query: 195 VEAKKLFD 202
EA LF+
Sbjct: 494 KEAIDLFE 501
Score = 81.6 bits (200), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 88/180 (48%), Gaps = 12/180 (6%)
Query: 37 IIQRGLEQDQFLISN-----FISLAHSLSTIAY-----STTVFSRVLSPTTFLWNTLIKS 86
++Q+ +E++ ISN F +H S I + VF ++ W ++IK
Sbjct: 21 LLQKPVEENIVRISNQVMVKFDPNSHLRSLINAGNLRAARQVFDKMPHGDIVSWTSIIKR 80
Query: 87 HCQNSYFPATLSAFARMKA--NGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLE 144
+ + L F+ M+ + PDT +V+KAC G+S+H A++ L
Sbjct: 81 YVTANNSDEALILFSAMRVVDHAVSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLL 140
Query: 145 EDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
V+VG+SL+DMY + G+I + +VF M RN V+WTA++ G V AG E F M
Sbjct: 141 SSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEM 200
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 90/190 (47%), Gaps = 3/190 (1%)
Query: 18 ATLLKAC---KRTEHLQQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLS 74
A LKAC ++ ++ + IH +I RG + ++ ++ + +F +
Sbjct: 213 AIALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSE 272
Query: 75 PTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSV 134
W +LI ++ + + F +M+ + P+ T+ + AC+++ R + G+ +
Sbjct: 273 RDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQL 332
Query: 135 HGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDV 194
H + L GL + + V S++ MY CG + A +F M R+++SW+ ++ GY AG
Sbjct: 333 HCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFG 392
Query: 195 VEAKKLFDGM 204
E K F M
Sbjct: 393 EEGFKYFSWM 402
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 94.7 bits (234), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 84/176 (47%), Gaps = 2/176 (1%)
Query: 31 QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQN 90
+++H+ ++ G D+F S FI+L + VF WN +I
Sbjct: 137 KELHSVAVRLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHA 196
Query: 91 SYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEE--DVF 148
+ F MK +G PD +T V +C + +H L+ EE D+
Sbjct: 197 GRANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIM 256
Query: 149 VGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
+ SLIDMYGKCG + A +F+ M RNVVSW++M+VGY A G+ +EA + F M
Sbjct: 257 MLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQM 312
Score = 87.0 bits (214), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 54/159 (33%), Positives = 80/159 (50%), Gaps = 4/159 (2%)
Query: 48 LISNFISLAHSLSTIAYSTTVFSRVLS--PTTFLWNTLIKSHCQNSYFPATLSAFARMKA 105
L+SN SLA + SR+L P FLWN +++S+ ++ + + M
Sbjct: 53 LLSNCTSLARVRRI--HGDIFRSRILDQYPIAFLWNNIMRSYIRHESPLDAIQVYLGMVR 110
Query: 106 NGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGD 165
+ +PD Y+ P+VIKA + GK +H A+R G D F + I +Y K GE +
Sbjct: 111 STVLPDRYSLPIVIKAAVQIHDFTLGKELHSVAVRLGFVGDEFCESGFITLYCKAGEFEN 170
Query: 166 ARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
ARKVFD R + SW A++ G AG EA ++F M
Sbjct: 171 ARKVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDM 209
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 78/171 (45%), Gaps = 4/171 (2%)
Query: 32 QIHACIIQRGLEQ--DQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQ 89
Q+H C++Q E+ D ++++ I + + ++ +F + W+++I +
Sbjct: 239 QLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAA 298
Query: 90 NSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSAL-RCGLEEDVF 148
N L F +M+ G P+ T+ V+ AC EGK+ LE +
Sbjct: 299 NGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGGLVEEGKTYFAMMKSEFELEPGLS 358
Query: 149 VGTSLIDMYGKCGEIGDARKVFDRMSGR-NVVSWTAMVVGYVAAGDVVEAK 198
++D+ + G++ +A+KV + M + NV+ W ++ G GDV A+
Sbjct: 359 HYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMGGCEKFGDVEMAE 409
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 94.7 bits (234), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 89/174 (51%)
Query: 31 QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQN 90
+ IH+ +I+ G ++ ++ + L + +A + VF ++ WN++I +N
Sbjct: 8 ETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAEN 67
Query: 91 SYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVG 150
L+ + M + G PD +T ++ AC+ + GK VH ++ GL ++
Sbjct: 68 GKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSS 127
Query: 151 TSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
L+D+Y +CG + +A+ +FD M +N VSWT+++VG G EA +LF M
Sbjct: 128 NVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYM 181
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 44/74 (59%)
Query: 131 GKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVA 190
G+++H +R G ++V SL+ +Y CG++ A KVFD+M +++V+W +++ G+
Sbjct: 7 GETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAE 66
Query: 191 AGDVVEAKKLFDGM 204
G EA L+ M
Sbjct: 67 NGKPEEALALYTEM 80
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 94.4 bits (233), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 92/175 (52%), Gaps = 1/175 (0%)
Query: 31 QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVL-SPTTFLWNTLIKSHCQ 89
+QIH I+ G + D +++ +++ I+ + +F + W +++ + Q
Sbjct: 145 EQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYSQ 204
Query: 90 NSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFV 149
N + + F ++ G+ + YT+P V+ AC+++ G VH ++ G + +++V
Sbjct: 205 NGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYV 264
Query: 150 GTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
++LIDMY KC E+ AR + + M +VVSW +M+VG V G + EA +F M
Sbjct: 265 QSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRM 319
Score = 90.9 bits (224), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 81/171 (47%)
Query: 34 HACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQNSYF 93
H I++ G + + + + + + + VF ++ W L+ + N +
Sbjct: 352 HCLIVKTGYATYKLVNNALVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSY 411
Query: 94 PATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVGTSL 153
L F M+ G PD V+ A + + G+ VHG+ ++ G + V SL
Sbjct: 412 DEALKLFCNMRVGGITPDKIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSL 471
Query: 154 IDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
+ MY KCG + DA +F+ M R++++WT ++VGY G + +A++ FD M
Sbjct: 472 VTMYTKCGSLEDANVIFNSMEIRDLITWTCLIVGYAKNGLLEDAQRYFDSM 522
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 83/160 (51%), Gaps = 1/160 (0%)
Query: 43 EQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQNSYFPATLSAFAR 102
E+D+F + I + ++ + +F T WN LI +C++ + F
Sbjct: 56 ERDEFTWNTMIVAYSNSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWE 115
Query: 103 MKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVGTSLIDMYGKCGE 162
M+++G P+ YT V++ C+++ L G+ +HG ++ G + DV V L+ MY +C
Sbjct: 116 MQSDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKR 175
Query: 163 IGDARKVFDRMSG-RNVVSWTAMVVGYVAAGDVVEAKKLF 201
I +A +F+ M G +N V+WT+M+ GY G +A + F
Sbjct: 176 ISEAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFKAIECF 215
Score = 78.2 bits (191), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 82/179 (45%), Gaps = 5/179 (2%)
Query: 32 QIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQNS 91
Q+H CI++ G + + ++ S I + + + + + WN++I +
Sbjct: 248 QVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQG 307
Query: 92 YFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGK---SVHGSALRCGLEEDVF 148
LS F RM D +T P ++ C A+ R E K S H ++ G
Sbjct: 308 LIGEALSMFGRMHERDMKIDDFTIPSILN-CFALSR-TEMKIASSAHCLIVKTGYATYKL 365
Query: 149 VGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGMPPG 207
V +L+DMY K G + A KVF+ M ++V+SWTA+V G G EA KLF M G
Sbjct: 366 VNNALVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVG 424
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 94.4 bits (233), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 87/173 (50%), Gaps = 1/173 (0%)
Query: 33 IHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQNSY 92
IHA II D L + + + S + + VF R+ +P WN++I +N +
Sbjct: 322 IHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGF 381
Query: 93 FPATLSAFARM-KANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVGT 151
+ + R+ + + PD YT+ I A + R + GK +HG + G E VFVGT
Sbjct: 382 GEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGT 441
Query: 152 SLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
+L+ MY K E A+KVFD M R+VV WT M+VG+ G+ A + F M
Sbjct: 442 TLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEM 494
Score = 77.8 bits (190), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 93/183 (50%), Gaps = 14/183 (7%)
Query: 31 QQIHACIIQRGL---EQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSH 87
+QIHA ++ G + + +N IS+ ++ + VF ++ +N L ++
Sbjct: 114 RQIHALVLTAGAGAATESPYANNNLISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAY 173
Query: 88 CQN----SY-FPATLS-AFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRC 141
+N SY FP T AF +K P++ T+ +++ C+ + L G S++ ++
Sbjct: 174 SRNPDFASYAFPLTTHMAFEYVK-----PNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKL 228
Query: 142 GLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLF 201
G ++V V TS++ MY CG++ AR++FD ++ R+ V+W M+VG + + + F
Sbjct: 229 GYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFF 288
Query: 202 DGM 204
M
Sbjct: 289 RNM 291
Score = 70.9 bits (172), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 82/172 (47%), Gaps = 3/172 (1%)
Query: 19 TLLKACKRTEHL---QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSP 75
+L++ C E + +++ II+ G + + ++ + + S + + +F V +
Sbjct: 204 SLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNR 263
Query: 76 TTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVH 135
WNT+I +N L F M +G P +TY +V+ CS + GK +H
Sbjct: 264 DAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIH 323
Query: 136 GSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVG 187
+ D+ + +L+DMY CG++ +A VF R+ N+VSW +++ G
Sbjct: 324 ARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISG 375
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 78/178 (43%)
Query: 25 KRTEHLQQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLI 84
+R H + +H + + G E+ F+ + +S+ + VF + LW +I
Sbjct: 416 ERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMI 475
Query: 85 KSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLE 144
H + + F M + D ++ VI ACS M +G+ H A+R G +
Sbjct: 476 VGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGFD 535
Query: 145 EDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFD 202
+ V +L+DMYGK G+ A +F S ++ W +M+ Y G V +A F+
Sbjct: 536 CVMSVCGALVDMYGKNGKYETAETIFSLASNPDLKCWNSMLGAYSQHGMVEKALSFFE 593
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/158 (20%), Positives = 72/158 (45%), Gaps = 3/158 (1%)
Query: 18 ATLLKACKRTEHLQQ---IHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLS 74
++++ AC L+Q H I+ G + + + + + T+FS +
Sbjct: 507 SSVIGACSDMAMLRQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAETIFSLASN 566
Query: 75 PTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSV 134
P WN+++ ++ Q+ LS F ++ NG +PD TY ++ ACS L+GK +
Sbjct: 567 PDLKCWNSMLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAACSHRGSTLQGKFL 626
Query: 135 HGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDR 172
G++ + ++++ K G + +A ++ ++
Sbjct: 627 WNQMKEQGIKAGFKHYSCMVNLVSKAGLVDEALELIEQ 664
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 94.4 bits (233), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 88/174 (50%), Gaps = 1/174 (0%)
Query: 32 QIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLS-PTTFLWNTLIKSHCQN 90
QIH+ II+ G D + ++ +++ S + +F + + WNT++ + Q+
Sbjct: 392 QIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQH 451
Query: 91 SYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVG 150
L F M + PD T +++ C + G VH +L+ GL + F+
Sbjct: 452 EQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIK 511
Query: 151 TSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
LIDMY KCG +G AR++FD M R+VVSW+ ++VGY +G EA LF M
Sbjct: 512 NGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEM 565
Score = 84.0 bits (206), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 79/148 (53%), Gaps = 3/148 (2%)
Query: 58 SLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVP-DTYTYP 116
S S I +++V S + T L N I S C+++++ L AF + N S TY
Sbjct: 14 SNSQILATSSVVSTI--KTEELMNDHINSLCKSNFYREALEAFDFAQKNSSFKIRLRTYI 71
Query: 117 LVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGR 176
+I ACS+ +G+ +H L + D + ++ MYGKCG + DAR+VFD M R
Sbjct: 72 SLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPER 131
Query: 177 NVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
N+VS+T+++ GY G EA +L+ M
Sbjct: 132 NLVSYTSVITGYSQNGQGAEAIRLYLKM 159
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 94/192 (48%), Gaps = 8/192 (4%)
Query: 19 TLLKACKRTEHL---QQIHACIIQRGLEQDQFLISN--FISLAHSLSTIAYSTTVFSRVL 73
+++KAC + + +Q+HA +I+ LE LI+ I++ + ++ ++ VF +
Sbjct: 173 SIIKACASSSDVGLGKQLHAQVIK--LESSSHLIAQNALIAMYVRFNQMSDASRVFYGIP 230
Query: 74 SPTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSV-PDTYTYPLVIKACSAMCRGLEGK 132
W+++I Q + LS M + G P+ Y + +KACS++ R G
Sbjct: 231 MKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGS 290
Query: 133 SVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAG 192
+HG ++ L + G SL DMY +CG + AR+VFD++ + SW ++ G G
Sbjct: 291 QIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNG 350
Query: 193 DVVEAKKLFDGM 204
EA +F M
Sbjct: 351 YADEAVSVFSQM 362
Score = 67.0 bits (162), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 85/182 (46%), Gaps = 3/182 (1%)
Query: 19 TLLKACKRTEHLQQ---IHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSP 75
+L+ AC + L Q IH I+ + D L ++ +S+ ++ + VF +
Sbjct: 72 SLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPER 131
Query: 76 TTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVH 135
+ ++I + QN + + +M VPD + + +IKAC++ GK +H
Sbjct: 132 NLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLH 191
Query: 136 GSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVV 195
++ + +LI MY + ++ DA +VF + ++++SW++++ G+ G
Sbjct: 192 AQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEF 251
Query: 196 EA 197
EA
Sbjct: 252 EA 253
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 83/188 (44%), Gaps = 4/188 (2%)
Query: 21 LKACK---RTEHLQQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTT 77
LKAC R ++ QIH I+ L + + + + + VF ++ P T
Sbjct: 277 LKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDT 336
Query: 78 FLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGS 137
WN +I N Y +S F++M+++G +PD + ++ A + +G +H
Sbjct: 337 ASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSY 396
Query: 138 ALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVF-DRMSGRNVVSWTAMVVGYVAAGDVVE 196
++ G D+ V SL+ MY C ++ +F D + + VSW ++ + VE
Sbjct: 397 IIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVE 456
Query: 197 AKKLFDGM 204
+LF M
Sbjct: 457 MLRLFKLM 464
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 84/186 (45%), Gaps = 5/186 (2%)
Query: 19 TLLKACKRTEHLQ---QIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSP 75
LL+ C L+ Q+H ++ GL +QF+ + I + ++ + +F + +
Sbjct: 478 NLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNR 537
Query: 76 TTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVH 135
W+TLI + Q+ + L F MK+ G P+ T+ V+ ACS + EG ++
Sbjct: 538 DVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLY 597
Query: 136 GS-ALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGR-NVVSWTAMVVGYVAAGD 193
+ G+ + ++D+ + G + +A + D M +VV W ++ G+
Sbjct: 598 ATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGN 657
Query: 194 VVEAKK 199
V A+K
Sbjct: 658 VHLAQK 663
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 93.6 bits (231), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 94/187 (50%), Gaps = 3/187 (1%)
Query: 21 LKACKRTEHLQ---QIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTT 77
LK C +L+ Q+H+ ++ G E D + S + L ++ I + +F R+ +
Sbjct: 349 LKICINYVNLRLGLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDI 408
Query: 78 FLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGS 137
++ LI+ ++ + F + G D + ++K CS++ GK +HG
Sbjct: 409 IAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGL 468
Query: 138 ALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEA 197
++ G E + T+L+DMY KCGEI + +FD M R+VVSWT ++VG+ G V EA
Sbjct: 469 CIKKGYESEPVTATALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEA 528
Query: 198 KKLFDGM 204
+ F M
Sbjct: 529 FRYFHKM 535
Score = 82.8 bits (203), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 88/178 (49%), Gaps = 6/178 (3%)
Query: 21 LKACKRTEHL---QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSR---VLS 74
LKAC L +Q+H C+++ GLE F IS I + + ++ Y+ VF + ++
Sbjct: 245 LKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVN 304
Query: 75 PTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSV 134
+ +WN+++ N A L ++ + D+YT +K C G V
Sbjct: 305 SSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQV 364
Query: 135 HGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAG 192
H + G E D VG+ L+D++ G I DA K+F R+ +++++++ ++ G V +G
Sbjct: 365 HSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSG 422
Score = 73.9 bits (180), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 87/186 (46%), Gaps = 4/186 (2%)
Query: 21 LKACKRTEHLQQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLW 80
++A KR E +Q A +I++G+ Q+ F+ +N IS+ ++ + VF + W
Sbjct: 18 VQAFKRGESIQ---AHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNIVTW 74
Query: 81 NTLIKSHCQNSYFPATLSAFARM-KANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSAL 139
T++ + + + + RM + + + Y V+KAC + G V+
Sbjct: 75 TTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIG 134
Query: 140 RCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKK 199
+ L DV + S++DMY K G + +A F + + SW ++ GY AG + EA
Sbjct: 135 KENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVT 194
Query: 200 LFDGMP 205
LF MP
Sbjct: 195 LFHRMP 200
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 85/208 (40%), Gaps = 36/208 (17%)
Query: 18 ATLLKACKRTEHLQQ---IHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLS 74
+ +LKAC +Q ++ I + L D L+++ + + + + + F +L
Sbjct: 111 SAVLKACGLVGDIQLGILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILR 170
Query: 75 PTTFLWNTLIKSHCQNSYF------------------------------PATLSAFARMK 104
P++ WNTLI +C+ P L RM+
Sbjct: 171 PSSTSWNTLISGYCKAGLMDEAVTLFHRMPQPNVVSWNCLISGFVDKGSPRALEFLVRMQ 230
Query: 105 ANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIG 164
G V D + P +KACS GK +H ++ GLE F ++LIDMY CG +
Sbjct: 231 REGLVLDGFALPCGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLI 290
Query: 165 DARKVFDRMS---GRNVVSWTAMVVGYV 189
A VF + +V W +M+ G++
Sbjct: 291 YAADVFHQEKLAVNSSVAVWNSMLSGFL 318
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 87/174 (50%)
Query: 31 QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQN 90
+Q+H I+ G D + ++ + S VF + W TLI + +N
Sbjct: 113 RQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARN 172
Query: 91 SYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVG 150
S L+ F RM+ G+ P+++T+ + + G G VH ++ GL++ + V
Sbjct: 173 SMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVS 232
Query: 151 TSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
SLI++Y KCG + AR +FD+ ++VV+W +M+ GY A G +EA +F M
Sbjct: 233 NSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSM 286
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 85/174 (48%), Gaps = 1/174 (0%)
Query: 32 QIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQNS 91
++HA +++ E+ + + + L + + VFS + W+ ++ + Q
Sbjct: 414 EVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTG 473
Query: 92 YFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGL-EGKSVHGSALRCGLEEDVFVG 150
A + F + G P+ +T+ ++ C+A + +GK HG A++ L+ + V
Sbjct: 474 ETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVS 533
Query: 151 TSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
++L+ MY K G I A +VF R +++VSW +M+ GY G ++A +F M
Sbjct: 534 SALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEM 587
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 91/194 (46%), Gaps = 8/194 (4%)
Query: 18 ATLLKACKRTEHL---QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRV-L 73
A+++K C + L +Q+H +++ G DQ + + + + + + +F +
Sbjct: 299 ASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGC 358
Query: 74 SPTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKS 133
W +I QN + F+ MK G P+ +TY +++ A +
Sbjct: 359 VGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPV----ISPSE 414
Query: 134 VHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGD 193
VH ++ E VGT+L+D Y K G++ +A KVF + +++V+W+AM+ GY G+
Sbjct: 415 VHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGE 474
Query: 194 VVEAKKLFDGMPPG 207
A K+F + G
Sbjct: 475 TEAAIKMFGELTKG 488
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 46/78 (58%)
Query: 111 DTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVF 170
D + V+K + +C L G+ +H ++ G +DV VGTSL+D Y K D RKVF
Sbjct: 92 DCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVF 151
Query: 171 DRMSGRNVVSWTAMVVGY 188
D M RNVV+WT ++ GY
Sbjct: 152 DEMKERNVVTWTTLISGY 169
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 82/174 (47%), Gaps = 1/174 (0%)
Query: 32 QIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQNS 91
Q+H +++ GL++ + ++ I+L + + +F + + WN++I + N
Sbjct: 215 QVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANG 274
Query: 92 YFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVGT 151
L F M+ N ++ VIK C+ + + +H S ++ G D + T
Sbjct: 275 LDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRT 334
Query: 152 SLIDMYGKCGEIGDARKVFDRMS-GRNVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
+L+ Y KC + DA ++F + NVVSWTAM+ G++ EA LF M
Sbjct: 335 ALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEM 388
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 92.8 bits (229), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 95/189 (50%), Gaps = 4/189 (2%)
Query: 20 LLKACKRTEHLQQIHA-CIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVF---SRVLSP 75
LL C + +Q+HA ++ + + L +N IS+ L + + VF S VL
Sbjct: 62 LLGLCLTAQQCRQVHAQVLLSDFIFRSGSLAANLISVYARLGLLLDARNVFETVSLVLLS 121
Query: 76 TTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVH 135
LWN+++K++ + + L + M+ G D Y PL+++AC + R ++ H
Sbjct: 122 DLRLWNSILKANVSHGLYENALELYRGMRQRGLTGDGYILPLILRACRYLGRFGLCRAFH 181
Query: 136 GSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVV 195
++ GL+E++ V L+ +Y K G +GDA +F M RN +SW M+ G+ D
Sbjct: 182 TQVIQIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCE 241
Query: 196 EAKKLFDGM 204
A K+F+ M
Sbjct: 242 SAVKIFEWM 250
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 94/229 (41%), Gaps = 42/229 (18%)
Query: 18 ATLLKACKRTEHL---QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLS 74
A C E L +++H +I+ G E+ + I + + + +F ++ +
Sbjct: 298 AVFFSVCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRN 357
Query: 75 PTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSV----PDTYTYPLVIKACSAMCRG-- 128
WN+LI S LS F+ ++ V + T+ VIK C+ RG
Sbjct: 358 KGIESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDD 417
Query: 129 -LE--------------------------------GKSVHGSALRCGLEEDVFVGTSLID 155
LE G+ +HG +R + E++ V +L++
Sbjct: 418 SLEYFRQMQFSKVLANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVN 477
Query: 156 MYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
MY KCG + + VF+ + ++++SW +++ GY G +A +FD M
Sbjct: 478 MYAKCGLLSEGSLVFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRM 526
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 92/221 (41%), Gaps = 40/221 (18%)
Query: 20 LLKACK---RTEHLQQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPT 76
+L+AC+ R + H +IQ GL+++ +++ ++L + + +F +
Sbjct: 164 ILRACRYLGRFGLCRAFHTQVIQIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRN 223
Query: 77 TFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLE------ 130
WN +IK Q + + F M+ PD T+ V+ +C + C E
Sbjct: 224 RMSWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVL-SCHSQCGKFEDVLKYF 282
Query: 131 ------------------------------GKSVHGSALRCGLEEDVFVGTSLIDMYGKC 160
+ VHG ++ G EE + +LI +YGK
Sbjct: 283 HLMRMSGNAVSGEALAVFFSVCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQ 342
Query: 161 GEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLF 201
G++ DA +F ++ + + SW +++ +V AG + EA LF
Sbjct: 343 GKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLF 383
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/144 (21%), Positives = 68/144 (47%), Gaps = 1/144 (0%)
Query: 31 QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQN 90
++IH +I+ + ++ + + +++ ++ + VF + WN++IK + +
Sbjct: 454 REIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFEAIRDKDLISWNSIIKGYGMH 513
Query: 91 SYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSV-HGSALRCGLEEDVFV 149
+ LS F RM ++G PD V+ ACS +G+ + + + R GLE
Sbjct: 514 GFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLVEKGREIFYSMSKRFGLEPQQEH 573
Query: 150 GTSLIDMYGKCGEIGDARKVFDRM 173
++D+ G+ G + +A ++ M
Sbjct: 574 YACIVDLLGRVGFLKEASEIVKNM 597
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 92.8 bits (229), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 82/162 (50%)
Query: 43 EQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQNSYFPATLSAFAR 102
E++ F+ S +S + + + +F RV + +WNTLI + QN Y + AF
Sbjct: 205 EKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFN 264
Query: 103 MKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVGTSLIDMYGKCGE 162
M+ G PD T ++ AC+ R G+ VH G+E + FV +LIDMY KCG+
Sbjct: 265 MQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGD 324
Query: 163 IGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
+ +A VF+ +S R+V +M+ G EA ++F M
Sbjct: 325 LENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTM 366
Score = 91.7 bits (226), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 52/131 (39%), Positives = 76/131 (58%), Gaps = 2/131 (1%)
Query: 73 LSPTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMC-RGLEG 131
LS F + LIK+H L + ++ G + PL+++AC+ + R + G
Sbjct: 7 LSLGEFHVSNLIKNHISRGSPIQALVLYGGIRRRGVYFPGWV-PLILRACACVVPRVVLG 65
Query: 132 KSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAA 191
K +H +++ G+ DV VG+SLI MYGKCG + ARKVFD M RNV +W AM+ GY++
Sbjct: 66 KLLHSESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSN 125
Query: 192 GDVVEAKKLFD 202
GD V A LF+
Sbjct: 126 GDAVLASGLFE 136
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 74/159 (46%), Gaps = 3/159 (1%)
Query: 18 ATLLKACKRTEHL---QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLS 74
+++L AC ++ L +++H+ I RG+E +QF+ + I + + +T+VF +
Sbjct: 278 SSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGDLENATSVFESISV 337
Query: 75 PTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSV 134
+ N++I + L F+ M++ PD T+ V+ AC +EG +
Sbjct: 338 RSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVLTACVHGGFLMEGLKI 397
Query: 135 HGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRM 173
++ +V LI + G+ G++ +A ++ M
Sbjct: 398 FSEMKTQDVKPNVKHFGCLIHLLGRSGKLKEAYRLVKEM 436
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 92.8 bits (229), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 97/181 (53%), Gaps = 1/181 (0%)
Query: 25 KRTEHLQQIHACIIQRG-LEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTL 83
K H+ QIHA +I G L + + I+ + I+Y+ VF + ++N++
Sbjct: 28 KLKRHITQIHAFVISTGNLLNGSSISRDLIASCGRIGEISYARKVFDELPQRGVSVYNSM 87
Query: 84 IKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGL 143
I + + L + +M A PD+ T+ + IKAC + +G++V A+ G
Sbjct: 88 IVVYSRGKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKGEAVWCKAVDFGY 147
Query: 144 EEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDG 203
+ DVFV +S++++Y KCG++ +A +F +M+ R+V+ WT MV G+ AG ++A + +
Sbjct: 148 KNDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYRE 207
Query: 204 M 204
M
Sbjct: 208 M 208
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 85/174 (48%), Gaps = 1/174 (0%)
Query: 31 QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQN 90
+ +H + + GL + + ++ + + + I ++ VFSR++ T W +LI QN
Sbjct: 237 RSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQN 296
Query: 91 SYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVG 150
A M++ G PD T V+ ACS + G+ VH L+ + + V
Sbjct: 297 GLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRHVLDRV-TA 355
Query: 151 TSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
T+L+DMY KCG + +R++F+ + +++V W M+ Y G+ E LF M
Sbjct: 356 TALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLKM 409
Score = 70.9 bits (172), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 70/152 (46%)
Query: 41 GLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQNSYFPATLSAF 100
G + D F+ S+ ++L + + +F ++ W T++ Q + +
Sbjct: 146 GYKNDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFY 205
Query: 101 ARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVGTSLIDMYGKC 160
M+ G D +++A + G+SVHG R GL +V V TSL+DMY K
Sbjct: 206 REMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKV 265
Query: 161 GEIGDARKVFDRMSGRNVVSWTAMVVGYVAAG 192
G I A +VF RM + VSW +++ G+ G
Sbjct: 266 GFIEVASRVFSRMMFKTAVSWGSLISGFAQNG 297
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 92.8 bits (229), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 93/204 (45%), Gaps = 32/204 (15%)
Query: 33 IHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQNSY 92
+HA II+ +E D LI+ + + + TVF + ++I + +
Sbjct: 162 VHARIIKCDVELDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGF 221
Query: 93 ------------------FPATLSAFAR--------------MKANGSVPDTYTYPLVIK 120
+ A + F+R M+ G P+ T+ VI
Sbjct: 222 VEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIG 281
Query: 121 ACSAMCRGLEGKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVS 180
ACS + G+ VH ++ G+ + +G+SL+DMY KCG I DAR+VFD+M +NV S
Sbjct: 282 ACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFS 341
Query: 181 WTAMVVGYVAAGDVVEAKKLFDGM 204
WT+M+ GY G+ EA +LF M
Sbjct: 342 WTSMIDGYGKNGNPEEALELFTRM 365
Score = 88.2 bits (217), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 92/182 (50%), Gaps = 15/182 (8%)
Query: 31 QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQN 90
++IHA II+ G + D + + L ++Y+ VF + PT +N +I + ++
Sbjct: 54 KKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGYLKH 113
Query: 91 SYFPATLSAFARMKANGSVPDTYTYPLVIKACSA----------MCRGLEGKSVHGSALR 140
L RM +G D YT +V+KA ++ +CR VH ++
Sbjct: 114 GLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCR-----LVHARIIK 168
Query: 141 CGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKL 200
C +E D + T+L+D Y K G++ AR VF+ M NVV T+M+ GY+ G V +A+++
Sbjct: 169 CDVELDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEI 228
Query: 201 FD 202
F+
Sbjct: 229 FN 230
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 83/172 (48%)
Query: 33 IHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQNSY 92
IH +++ G E ++ +++ S + S VF + P W +LI QN
Sbjct: 289 IHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGR 348
Query: 93 FPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVGTS 152
L F +M + P+++T ++ CS + EG+ +HG + G + D + G+
Sbjct: 349 EEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSG 408
Query: 153 LIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
LID+YGKCG AR VFD +S +V+S M+ Y G EA LF+ M
Sbjct: 409 LIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERM 460
Score = 88.2 bits (217), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 76/144 (52%), Gaps = 1/144 (0%)
Query: 62 IAYSTTVFSRVLSPTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKA 121
I Y+ VF + WN+LI ++ + + M N +PD YT V KA
Sbjct: 115 IDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKA 174
Query: 122 CSAMCRGLEGKSVHGSALRCGLE-EDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVS 180
S + E + HG A+ GLE +VFVG++L+DMY K G+ +A+ V DR+ ++VV
Sbjct: 175 FSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVL 234
Query: 181 WTAMVVGYVAAGDVVEAKKLFDGM 204
TA++VGY G+ EA K F M
Sbjct: 235 ITALIVGYSQKGEDTEAVKAFQSM 258
Score = 70.9 bits (172), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 81/183 (44%), Gaps = 6/183 (3%)
Query: 31 QQIHACIIQRGLE-QDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQ 89
Q+ H + GLE + F+ S + + + V RV L LI + Q
Sbjct: 185 QRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQ 244
Query: 90 NSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFV 149
+ AF M P+ YTY V+ +C + GK +HG ++ G E +
Sbjct: 245 KGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALAS 304
Query: 150 GTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGD----VVEAKKLF-DGM 204
TSL+ MY +C + D+ +VF + N VSWT+++ G V G ++E +K+ D +
Sbjct: 305 QTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSI 364
Query: 205 PPG 207
P
Sbjct: 365 KPN 367
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 70/163 (42%), Gaps = 10/163 (6%)
Query: 28 EHLQQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSH 87
E +QIH + + G ++D++ S I L + VF + NT+I S+
Sbjct: 385 EEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSY 444
Query: 88 CQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDV 147
QN + L F RM G P+ T V+ AC+ R +E G L +D
Sbjct: 445 AQNGFGREALDLFERMINLGLQPNDVTVLSVLLACNN-SRLVE----EGCELFDSFRKDK 499
Query: 148 FVGTS-----LIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMV 185
+ T+ ++D+ G+ G + +A + + ++V W ++
Sbjct: 500 IMLTNDHYACMVDLLGRAGRLEEAEMLTTEVINPDLVLWRTLL 542
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 90/190 (47%), Gaps = 3/190 (1%)
Query: 18 ATLLKACKRTEHLQ---QIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLS 74
+++L ACK+ E L+ Q+H +++ G D ++ + +SL L + + +FS +
Sbjct: 292 SSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQ 351
Query: 75 PTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSV 134
+NTLI Q Y + F RM +G PD+ T ++ ACSA G+ +
Sbjct: 352 RDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQL 411
Query: 135 HGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDV 194
H + G + + +L+++Y KC +I A F NVV W M+V Y D+
Sbjct: 412 HAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDL 471
Query: 195 VEAKKLFDGM 204
+ ++F M
Sbjct: 472 RNSFRIFRQM 481
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 75/174 (43%)
Query: 31 QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQN 90
QQIHA G D + ++L I S F + + WN L+ Q+
Sbjct: 611 QQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQS 670
Query: 91 SYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVG 150
L F RM G + +T+ +KA S +GK VH + G + + V
Sbjct: 671 GNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVC 730
Query: 151 TSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
+LI MY KCG I DA K F +S +N VSW A++ Y G EA FD M
Sbjct: 731 NALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQM 784
Score = 85.5 bits (210), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 83/174 (47%), Gaps = 3/174 (1%)
Query: 18 ATLLKACKRTEHL---QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLS 74
A+L+ AC L QQ+HA + G + + ++L + I + F
Sbjct: 393 ASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEV 452
Query: 75 PTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSV 134
LWN ++ ++ + F +M+ VP+ YTYP ++K C + G+ +
Sbjct: 453 ENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQI 512
Query: 135 HGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGY 188
H ++ + + +V + LIDMY K G++ A + R +G++VVSWT M+ GY
Sbjct: 513 HSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGY 566
Score = 81.3 bits (199), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 89/189 (47%), Gaps = 3/189 (1%)
Query: 19 TLLKACKRTEHLQ---QIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSP 75
++LK C R L+ QIH+ II+ + + ++ S I + L + + + R
Sbjct: 495 SILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGK 554
Query: 76 TTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVH 135
W T+I + Q ++ L+ F +M G D + AC+ + EG+ +H
Sbjct: 555 DVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIH 614
Query: 136 GSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVV 195
A G D+ +L+ +Y +CG+I ++ F++ + ++W A+V G+ +G+
Sbjct: 615 AQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNE 674
Query: 196 EAKKLFDGM 204
EA ++F M
Sbjct: 675 EALRVFVRM 683
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 84/190 (44%), Gaps = 5/190 (2%)
Query: 20 LLKACKRT----EHLQQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSP 75
LL+ C +T + +++H+ I++ GL+ + L + + VF +
Sbjct: 90 LLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPER 149
Query: 76 TTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLE-GKSV 134
T F WN +IK + F RM + P+ T+ V++AC + + +
Sbjct: 150 TIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQI 209
Query: 135 HGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDV 194
H L GL + V LID+Y + G + AR+VFD + ++ SW AM+ G
Sbjct: 210 HARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECE 269
Query: 195 VEAKKLFDGM 204
EA +LF M
Sbjct: 270 AEAIRLFCDM 279
Score = 70.9 bits (172), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 86/196 (43%), Gaps = 9/196 (4%)
Query: 20 LLKACK----RTEHLQQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSP 75
+L+AC+ + ++QIHA I+ +GL + + I L + + VF +
Sbjct: 192 VLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLK 251
Query: 76 TTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVH 135
W +I +N + F M G +P Y + V+ AC + G+ +H
Sbjct: 252 DHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLH 311
Query: 136 GSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVV 195
G L+ G D +V +L+ +Y G + A +F MS R+ V++ ++ G G
Sbjct: 312 GLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGE 371
Query: 196 EAKKLF-----DGMPP 206
+A +LF DG+ P
Sbjct: 372 KAMELFKRMHLDGLEP 387
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 92.4 bits (228), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 74/145 (51%), Gaps = 2/145 (1%)
Query: 62 IAYSTTVFSRVLSPTTFLWNTLIKSHCQNSYFPATLSAFARMKANG--SVPDTYTYPLVI 119
I Y+ +F + + +N +I+ + + + +S F RM + G VPD YTYP V
Sbjct: 65 ITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVA 124
Query: 120 KACSAMCRGLEGKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVV 179
KA + G VHG LR D +V +L+ MY G++ AR VFD M R+V+
Sbjct: 125 KAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVI 184
Query: 180 SWTAMVVGYVAAGDVVEAKKLFDGM 204
SW M+ GY G + +A +FD M
Sbjct: 185 SWNTMISGYYRNGYMNDALMMFDWM 209
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 91/181 (50%), Gaps = 7/181 (3%)
Query: 33 IHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQNSY 92
+H I++ +D+++ + +++ + + + VF + + WNT+I + +N Y
Sbjct: 139 VHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGY 198
Query: 93 FPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLE-GKSVHGSALRCGLEEDVFVGT 151
L F M D T ++ C + + LE G++VH L + + V
Sbjct: 199 MNDALMMFDWMVNESVDLDHATIVSMLPVCGHL-KDLEMGRNVHKLVEEKRLGDKIEVKN 257
Query: 152 SLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKL-----FDGMPP 206
+L++MY KCG + +AR VFDRM R+V++WT M+ GY GDV A +L F+G+ P
Sbjct: 258 ALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRP 317
Query: 207 G 207
Sbjct: 318 N 318
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 83/190 (43%), Gaps = 5/190 (2%)
Query: 19 TLLKACKRTEHLQ---QIHACIIQRGLEQDQFLISN-FISLAHSLSTIAYSTTVFSRVLS 74
++L C + L+ +H + ++ L D+ + N +++ + + VF R+
Sbjct: 223 SMLPVCGHLKDLEMGRNVHKLVEEKRL-GDKIEVKNALVNMYLKCGRMDEARFVFDRMER 281
Query: 75 PTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSV 134
W +I + ++ L M+ G P+ T ++ C + +GK +
Sbjct: 282 RDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCL 341
Query: 135 HGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDV 194
HG A+R + D+ + TSLI MY KC + +VF S + W+A++ G V V
Sbjct: 342 HGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELV 401
Query: 195 VEAKKLFDGM 204
+A LF M
Sbjct: 402 SDALGLFKRM 411
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 77/176 (43%), Gaps = 4/176 (2%)
Query: 33 IHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQNSY 92
+H +++ + D + ++ IS+ + VFS T W+ +I QN
Sbjct: 341 LHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNEL 400
Query: 93 FPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVGTS 152
L F RM+ P+ T ++ A +A+ + ++H + G + T
Sbjct: 401 VSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATG 460
Query: 153 LIDMYGKCGEIGDARKVF----DRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
L+ +Y KCG + A K+F ++ ++VV W A++ GY GD A ++F M
Sbjct: 461 LVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEM 516
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 92.0 bits (227), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 92/190 (48%), Gaps = 7/190 (3%)
Query: 19 TLLKACKRTEH---LQQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSP 75
+LL+ CK E + IH II+RG E ++ +S+ I S S + + TV +
Sbjct: 333 SLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYK 392
Query: 76 TTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVH 135
+T+I +S F M+ P+ T ++ ACS K H
Sbjct: 393 DVVSCSTMISGLAHAGRSDEAISIFCHMR---DTPNAITVISLLNACSVSADLRTSKWAH 449
Query: 136 GSALRCGLE-EDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDV 194
G A+R L D+ VGTS++D Y KCG I AR+ FD+++ +N++SWT ++ Y G
Sbjct: 450 GIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAINGLP 509
Query: 195 VEAKKLFDGM 204
+A LFD M
Sbjct: 510 DKALALFDEM 519
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 88/176 (50%), Gaps = 3/176 (1%)
Query: 31 QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQN 90
++IH +I+ G + N I ++ S + +F + W+ +I+S+ Q+
Sbjct: 145 EKIHGYVIRSGFCGISS-VQNSILCMYADSDSLSARKLFDEMSERDVISWSVVIRSYVQS 203
Query: 91 SYFPATLSAFARMKANGSV-PDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLE-EDVF 148
L F M PD T V+KAC+ M G+SVHG ++R G + DVF
Sbjct: 204 KEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLADVF 263
Query: 149 VGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
V SLIDMY K ++ A +VFD + RN+VSW +++ G+V EA ++F M
Sbjct: 264 VCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLM 319
Score = 77.4 bits (189), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 84/187 (44%), Gaps = 4/187 (2%)
Query: 19 TLLKACKRTEHL---QQIHACIIQRGLE-QDQFLISNFISLAHSLSTIAYSTTVFSRVLS 74
++LKAC E + + +H I+RG + D F+ ++ I + + + VF
Sbjct: 231 SVLKACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTC 290
Query: 75 PTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSV 134
WN+++ N + L F M D T +++ C + L KS+
Sbjct: 291 RNIVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSI 350
Query: 135 HGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDV 194
HG +R G E + +SLID Y C + DA V D M+ ++VVS + M+ G AG
Sbjct: 351 HGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRS 410
Query: 195 VEAKKLF 201
EA +F
Sbjct: 411 DEAISIF 417
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 65/125 (52%), Gaps = 3/125 (2%)
Query: 80 WNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSAL 139
WN ++ + L F++++ G P+T T LVI AC ++ +G+ +HG +
Sbjct: 95 WNVIVFGLLDYGFEEEGLWWFSKLRVWGFEPNTSTLVLVIHACRSL--WFDGEKIHGYVI 152
Query: 140 RCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKK 199
R G V S++ MY + ARK+FD MS R+V+SW+ ++ YV + + V K
Sbjct: 153 RSGFCGISSVQNSILCMYADSDSLS-ARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLK 211
Query: 200 LFDGM 204
LF M
Sbjct: 212 LFKEM 216
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 92.0 bits (227), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 91/176 (51%), Gaps = 4/176 (2%)
Query: 30 LQQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQ 89
++Q+HA ++ G+++ + L+ + + + Y+ +F + TFL+N LI+++
Sbjct: 4 IKQLHAHCLRTGVDETKDLLQRLLLIP----NLVYARKLFDHHQNSCTFLYNKLIQAYYV 59
Query: 90 NSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFV 149
+ ++ + + +G P +T+ + A ++ + +H R G E D F
Sbjct: 60 HHQPHESIVLYNLLSFDGLRPSHHTFNFIFAASASFSSARPLRLLHSQFFRSGFESDSFC 119
Query: 150 GTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGMP 205
T+LI Y K G + AR+VFD MS R+V W AM+ GY GD+ A +LFD MP
Sbjct: 120 CTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSMP 175
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 64/127 (50%), Gaps = 2/127 (1%)
Query: 80 WNTLIKSHCQNSYFPATLSAFARMKANGSV-PDTYTYPLVIKACSAMCRGLEGKSVHGSA 138
W T+I QN + L F M+ + SV P+ T V+ AC+ + G+ + G A
Sbjct: 182 WTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRRLEGYA 241
Query: 139 LRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSG-RNVVSWTAMVVGYVAAGDVVEA 197
G ++++V + I+MY KCG I A+++F+ + RN+ SW +M+ G EA
Sbjct: 242 RENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHGKHDEA 301
Query: 198 KKLFDGM 204
LF M
Sbjct: 302 LTLFAQM 308
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 92.0 bits (227), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 97/196 (49%), Gaps = 10/196 (5%)
Query: 20 LLKACKRTEHL---QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPT 76
LL AC L Q++HA +I+ +L + + + + V +
Sbjct: 58 LLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKN 117
Query: 77 TFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKAC-SAMCRGLEGKSVH 135
W +I + Q + L+ FA M + P+ +T+ V+ +C A GL GK +H
Sbjct: 118 VVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGL-GKQIH 176
Query: 136 GSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVV 195
G ++ + +FVG+SL+DMY K G+I +AR++F+ + R+VVS TA++ GY G
Sbjct: 177 GLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDE 236
Query: 196 EAKKLF-----DGMPP 206
EA ++F +GM P
Sbjct: 237 EALEMFHRLHSEGMSP 252
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 86/190 (45%), Gaps = 3/190 (1%)
Query: 18 ATLLKACKRTEHL---QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLS 74
AT+L +C R L +QIH I++ + F+ S+ + + I + +F +
Sbjct: 157 ATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPE 216
Query: 75 PTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSV 134
+I + Q L F R+ + G P+ TY ++ A S + GK
Sbjct: 217 RDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQA 276
Query: 135 HGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDV 194
H LR L + SLIDMY KCG + AR++FD M R +SW AM+VGY G
Sbjct: 277 HCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLG 336
Query: 195 VEAKKLFDGM 204
E +LF M
Sbjct: 337 REVLELFRLM 346
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 63/140 (45%), Gaps = 11/140 (7%)
Query: 74 SPTTFLWNTL--IKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEG 131
SPT ++ T+ I C N L A + G + Y ++ AC +G
Sbjct: 15 SPTNYVLQTILPISQLCSNGRLQEALLEMAML---GPEMGFHGYDALLNACLDKRALRDG 71
Query: 132 KSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAA 191
+ VH ++ ++ T L+ YGKC + DARKV D M +NVVSWTAM+ Y
Sbjct: 72 QRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQT 131
Query: 192 GDVVEAKKLF------DGMP 205
G EA +F DG P
Sbjct: 132 GHSSEALTVFAEMMRSDGKP 151
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 91.7 bits (226), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 95/193 (49%), Gaps = 4/193 (2%)
Query: 19 TLLKACKRTEH----LQQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLS 74
++L AC + +++IH + G D+ L + F+++ ++ S +F
Sbjct: 256 SVLPACVELNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKV 315
Query: 75 PTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSV 134
+W+++I + + ++ +M+ G ++ T ++ AC+ +V
Sbjct: 316 RDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTV 375
Query: 135 HGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDV 194
H L+CG + +G +LIDMY KCG + AR+VF ++ +++VSW++M+ Y G
Sbjct: 376 HSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYGLHGHG 435
Query: 195 VEAKKLFDGMPPG 207
EA ++F GM G
Sbjct: 436 SEALEIFKGMIKG 448
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 79/175 (45%), Gaps = 2/175 (1%)
Query: 32 QIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQNS 91
Q+H ++ G + D + ++ IS+ S VF +L T + ++I S CQ+
Sbjct: 68 QLHCLCLKAGADCDTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDG 127
Query: 92 YFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLE-GKSVHGSAL-RCGLEEDVFV 149
+ M G +P + ++ C+ M + + H L ++E V +
Sbjct: 128 LLYEAMKLIKEMYFYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESVLL 187
Query: 150 GTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
T+L+DMY K + A VFD+M +N VSWTAM+ G VA + LF M
Sbjct: 188 STALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAM 242
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 45/94 (47%), Gaps = 1/94 (1%)
Query: 112 TYTYPLVIKACSAMCRG-LEGKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVF 170
T P VIKAC+ L G +H L+ G + D V SLI MY K RKVF
Sbjct: 46 TAILPSVIKACAFQQEPFLLGAQLHCLCLKAGADCDTVVSNSLISMYAKFSRKYAVRKVF 105
Query: 171 DRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
D M R+ VS+ +++ G + EA KL M
Sbjct: 106 DEMLHRDTVSYCSIINSCCQDGLLYEAMKLIKEM 139
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 91.7 bits (226), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 75/144 (52%)
Query: 62 IAYSTTVFSRVLSPTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKA 121
IA + VF + W T+IK H +N + L F M+ G P T ++
Sbjct: 281 IAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSV 340
Query: 122 CSAMCRGLEGKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSW 181
C+++ GK VH +RC + DV+V + L+ MY KCGE+ ++ +FDR ++++ W
Sbjct: 341 CASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMW 400
Query: 182 TAMVVGYVAAGDVVEAKKLFDGMP 205
+++ GY + G EA K+F MP
Sbjct: 401 NSIISGYASHGLGEEALKVFCEMP 424
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 72/167 (43%), Gaps = 23/167 (13%)
Query: 62 IAYSTTVFSRVLSPTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYT------- 114
I + VF + W L+K + N S F +M V T
Sbjct: 95 IDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKVSWTVMLIGFLQD 154
Query: 115 ---------YPLVIK----ACSAMCRGL--EGKSVHGSALRCGL-EEDVFVGTSLIDMYG 158
Y ++ A ++M GL EG+ + + E V T+++ YG
Sbjct: 155 GRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYG 214
Query: 159 KCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGMP 205
+ + DARK+FD M + VSWT+M++GYV G + +A++LF+ MP
Sbjct: 215 QNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVMP 261
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 39/62 (62%)
Query: 144 EEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDG 203
+ ++ L+ Y K GEI +ARKVFD M RNVVSWTA+V GYV G V A+ LF
Sbjct: 76 DRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWK 135
Query: 204 MP 205
MP
Sbjct: 136 MP 137
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 31/41 (75%)
Query: 165 DARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGMP 205
DARK+FD M RN++SW +V GY+ G++ EA+K+FD MP
Sbjct: 66 DARKLFDEMPDRNIISWNGLVSGYMKNGEIDEARKVFDLMP 106
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 67/148 (45%), Gaps = 2/148 (1%)
Query: 29 HLQQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHC 88
H +Q+HA +++ + D ++ S +++ + S +F R S +WN++I +
Sbjct: 349 HGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYA 408
Query: 89 QNSYFPATLSAFARMKANGSV-PDTYTYPLVIKACSAMCRGLEGKSVHGSALRC-GLEED 146
+ L F M +GS P+ T+ + ACS EG ++ S G++
Sbjct: 409 SHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPI 468
Query: 147 VFVGTSLIDMYGKCGEIGDARKVFDRMS 174
++DM G+ G +A ++ D M+
Sbjct: 469 TAHYACMVDMLGRAGRFNEAMEMIDSMT 496
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 91.7 bits (226), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 78/148 (52%)
Query: 58 SLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPL 117
+ I+ + VF + W +IK++ + + L FA+M+ G P +
Sbjct: 277 EVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLIS 336
Query: 118 VIKACSAMCRGLEGKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRN 177
++ C+ + G+ VH +RC ++DV+V + L+ MY KCGE+ A+ VFDR S ++
Sbjct: 337 ILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKD 396
Query: 178 VVSWTAMVVGYVAAGDVVEAKKLFDGMP 205
++ W +++ GY + G EA K+F MP
Sbjct: 397 IIMWNSIISGYASHGLGEEALKIFHEMP 424
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 62/145 (42%), Gaps = 10/145 (6%)
Query: 62 IAYSTTVFSRVLSPTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKA 121
I + VF + W ++K + Q S F RM V T + +I
Sbjct: 95 IVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEVSWTVMFGGLID- 153
Query: 122 CSAMCRGLEGKSVHGSALRCGLE-EDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVS 180
+G+ L + +DV T++I + G + +AR +FD M RNVV+
Sbjct: 154 --------DGRIDKARKLYDMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMRERNVVT 205
Query: 181 WTAMVVGYVAAGDVVEAKKLFDGMP 205
WT M+ GY V A+KLF+ MP
Sbjct: 206 WTTMITGYRQNNRVDVARKLFEVMP 230
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 90/201 (44%), Gaps = 19/201 (9%)
Query: 19 TLLKACKRTEHLQ---QIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSP 75
++L C LQ Q+HA +++ + D ++ S +++ + + VF R S
Sbjct: 336 SILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSK 395
Query: 76 TTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVH 135
+WN++I + + L F M ++G++P+ T ++ ACS + EG +
Sbjct: 396 DIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIF 455
Query: 136 GSALRCGLEEDVFVGTSL------IDMYGKCGEIGDARKVFDRMSGR-NVVSWTAMVVGY 188
S +E V ++ +DM G+ G++ A ++ + M+ + + W A++
Sbjct: 456 ES-----MESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGAC 510
Query: 189 VAAGDV----VEAKKLFDGMP 205
+ V AKKLF+ P
Sbjct: 511 KTHSRLDLAEVAAKKLFENEP 531
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 37/62 (59%)
Query: 144 EEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDG 203
E +V L+ Y K I +AR VF+ M RNVVSWTAMV GY+ G V EA+ LF
Sbjct: 76 ERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWR 135
Query: 204 MP 205
MP
Sbjct: 136 MP 137
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 35/55 (63%)
Query: 151 TSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGMP 205
S++ Y G +AR++FD MS RNVVSW +V GY+ +VEA+ +F+ MP
Sbjct: 52 NSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELMP 106
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 91.3 bits (225), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 90/187 (48%), Gaps = 3/187 (1%)
Query: 21 LKACKRTEHLQ---QIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTT 77
LK+C+R + + +IH +I+ G D + ++ + + ++ ++ VF +
Sbjct: 114 LKSCERIKSIPKCLEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDL 173
Query: 78 FLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGS 137
WN +I LS + RM G D+YT ++ +C+ + G +H
Sbjct: 174 VSWNVMICCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRI 233
Query: 138 ALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEA 197
A E VFV +LIDMY KCG + +A VF+ M R+V++W +M++GY G VEA
Sbjct: 234 ACDIRCESCVFVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEA 293
Query: 198 KKLFDGM 204
F M
Sbjct: 294 ISFFRKM 300
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 98/189 (51%), Gaps = 4/189 (2%)
Query: 20 LLKACKRTEHLQQIHACIIQRGLEQDQFLISNFISL-AHSLS-TIAYSTTVFSRVLS-PT 76
+L+ C + L++IH+ +I GL+ + ++ + A S++ +++++ +F S P+
Sbjct: 11 MLQGCNSMKKLRKIHSHVIINGLQHHPSIFNHLLRFCAVSVTGSLSHAQLLFDHFDSDPS 70
Query: 77 TFLWNTLIKSHCQNSYFPATLSAFARMKANG-SVPDTYTYPLVIKACSAMCRGLEGKSVH 135
T WN LI+ +S ++ + RM + S PD +T+ +K+C + + +H
Sbjct: 71 TSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIPKCLEIH 130
Query: 136 GSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVV 195
GS +R G +D V TSL+ Y G + A KVFD M R++VSW M+ + G
Sbjct: 131 GSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHN 190
Query: 196 EAKKLFDGM 204
+A ++ M
Sbjct: 191 QALSMYKRM 199
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 90.9 bits (224), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 71/139 (51%), Gaps = 2/139 (1%)
Query: 68 VFSRVLSPTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSV-PDTYTYPLVIKACSAMC 126
VF + F WN LIK + QN L +F RM GSV P+ T LV+ AC+ +
Sbjct: 143 VFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLG 202
Query: 127 RGLEGKSVHGSALRCGLEE-DVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMV 185
GK VH G + DV V +LIDMYGKCG I A +VF + R+++SW M+
Sbjct: 203 AFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMI 262
Query: 186 VGYVAAGDVVEAKKLFDGM 204
G A G EA LF M
Sbjct: 263 NGLAAHGHGTEALNLFHEM 281
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 41/63 (65%)
Query: 143 LEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFD 202
+E++V + TS+I+ Y ++ AR+ FD R++V W M+ GY+ G+++EA+ LFD
Sbjct: 55 VEKNVVLWTSMINGYLLNKDLVSARRYFDLSPERDIVLWNTMISGYIEMGNMLEARSLFD 114
Query: 203 GMP 205
MP
Sbjct: 115 QMP 117
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 39/62 (62%)
Query: 144 EEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDG 203
E D+ + ++I Y + G + +AR +FD+M R+V+SW ++ GY GD+ +++FD
Sbjct: 87 ERDIVLWNTMISGYIEMGNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVFDD 146
Query: 204 MP 205
MP
Sbjct: 147 MP 148
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 58/146 (39%), Gaps = 8/146 (5%)
Query: 59 LSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLV 118
+ IA + VF ++ LW ++I + N + F D + +
Sbjct: 41 MGVIASANKVFCEMVEKNVVLWTSMINGYLLNKDLVSARRYFDLSPER----DIVLWNTM 96
Query: 119 IKACSAMCRGLEGKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNV 178
I M LE +S+ + C DV ++++ Y G++ +VFD M RNV
Sbjct: 97 ISGYIEMGNMLEARSLF-DQMPC---RDVMSWNTVLEGYANIGDMEACERVFDDMPERNV 152
Query: 179 VSWTAMVVGYVAAGDVVEAKKLFDGM 204
SW ++ GY G V E F M
Sbjct: 153 FSWNGLIKGYAQNGRVSEVLGSFKRM 178
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 90.5 bits (223), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 84/183 (45%), Gaps = 7/183 (3%)
Query: 31 QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSP-TTFLWNTLIKSHCQ 89
+QIH ++ + + + I+ + +FSR+ WN++I +
Sbjct: 537 KQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIH 596
Query: 90 NSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFV 149
N L M G D++ Y V+ A +++ G VH ++R LE DV V
Sbjct: 597 NELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVV 656
Query: 150 GTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGM----- 204
G++L+DMY KCG + A + F+ M RN SW +M+ GY G EA KLF+ M
Sbjct: 657 GSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQ 716
Query: 205 -PP 206
PP
Sbjct: 717 TPP 719
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 95/196 (48%), Gaps = 12/196 (6%)
Query: 19 TLLKACKRTEHL-----QQIHACIIQRGLEQDQFLISNFISLAHS-LSTIAYSTTVFSRV 72
++L+AC+ + +QIH + + D + + IS+ + ++ Y+ F +
Sbjct: 107 SVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDI 166
Query: 73 LSPTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTY-PLVIKACSAM---CRG 128
+ WN++I + Q + F+ M+ +GS P YT+ LV ACS R
Sbjct: 167 EVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRL 226
Query: 129 LEGKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGY 188
LE + + + GL D+FVG+ L+ + K G + ARKVF++M RN V+ ++VG
Sbjct: 227 LE--QIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGL 284
Query: 189 VAAGDVVEAKKLFDGM 204
V EA KLF M
Sbjct: 285 VRQKWGEEATKLFMDM 300
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 93/191 (48%), Gaps = 9/191 (4%)
Query: 23 ACKRTEH----LQQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTF 78
AC TE L+QI I + GL D F+ S +S +++Y+ VF+++ +
Sbjct: 216 ACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAV 275
Query: 79 LWNTLIKSHCQNSYFPATLSAFARMKANGSV-PDTYTYPLVIKACSAMCR--GLE-GKSV 134
N L+ + + F M + V P++Y L ++ GL+ G+ V
Sbjct: 276 TLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREV 335
Query: 135 HGSALRCGLEE-DVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGD 193
HG + GL + V +G L++MY KCG I DAR+VF M+ ++ VSW +M+ G G
Sbjct: 336 HGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGC 395
Query: 194 VVEAKKLFDGM 204
+EA + + M
Sbjct: 396 FIEAVERYKSM 406
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 80/156 (51%), Gaps = 1/156 (0%)
Query: 31 QQIHACIIQRGLEQDQFLISN-FISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQ 89
+++H +I GL I N +++ +IA + VF + + WN++I Q
Sbjct: 333 REVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQ 392
Query: 90 NSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFV 149
N F + + M+ + +P ++T + +C+++ G+ +HG +L+ G++ +V V
Sbjct: 393 NGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSV 452
Query: 150 GTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMV 185
+L+ +Y + G + + RK+F M + VSW +++
Sbjct: 453 SNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSII 488
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 81/161 (50%), Gaps = 2/161 (1%)
Query: 31 QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQN 90
QQIH ++ G++ + + + ++L + +FS + WN++I + ++
Sbjct: 435 QQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARS 494
Query: 91 SY-FPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFV 149
P + F + G + T+ V+ A S++ G GK +HG AL+ + ++
Sbjct: 495 ERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATT 554
Query: 150 GTSLIDMYGKCGEIGDARKVFDRMSG-RNVVSWTAMVVGYV 189
+LI YGKCGE+ K+F RM+ R+ V+W +M+ GY+
Sbjct: 555 ENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYI 595
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 74/175 (42%), Gaps = 3/175 (1%)
Query: 33 IHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQNSY 92
H+ + + L++D +L +N I+ + VF + W ++ + +N
Sbjct: 23 FHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGE 82
Query: 93 FPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRG--LEGKSVHGSALRCGLEEDVFVG 150
L M G + Y + V++AC + L G+ +HG + D V
Sbjct: 83 HKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVS 142
Query: 151 TSLIDMYGKC-GEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
LI MY KC G +G A F + +N VSW +++ Y AGD A ++F M
Sbjct: 143 NVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSM 197
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 78/174 (44%), Gaps = 6/174 (3%)
Query: 18 ATLLKACKRTEHLQ---QIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLS 74
AT+L A L+ ++HAC ++ LE D + S + + + Y+ F+ +
Sbjct: 623 ATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPV 682
Query: 75 PTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSV-PDTYTYPLVIKACSAMCRGLEG-K 132
++ WN++I + ++ L F MK +G PD T+ V+ ACS EG K
Sbjct: 683 RNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFK 742
Query: 133 SVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGR-NVVSWTAMV 185
+ GL + + + D+ G+ GE+ ++M + NV+ W ++
Sbjct: 743 HFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVL 796
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 126 CRGLEGKS--VHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTA 183
C G G + H + L++DV++ +LI+ Y + G+ ARKVFD M RN VSW
Sbjct: 13 CVGHRGAARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWAC 72
Query: 184 MVVGYVAAGDVVEA 197
+V GY G+ EA
Sbjct: 73 IVSGYSRNGEHKEA 86
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 90.5 bits (223), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 73/140 (52%)
Query: 68 VFSRVLSPTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCR 127
+F + WN +I ++ + ++S F M G + T L++ AC R
Sbjct: 206 LFDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSAR 265
Query: 128 GLEGKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVG 187
EG+SVH S +R L V + T+LIDMYGKC E+G AR++FD +S RN V+W M++
Sbjct: 266 LKEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILA 325
Query: 188 YVAAGDVVEAKKLFDGMPPG 207
+ G +LF+ M G
Sbjct: 326 HCLHGRPEGGLELFEAMING 345
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 94/192 (48%), Gaps = 8/192 (4%)
Query: 20 LLKACKRTE------HLQQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVL 73
LLK K E HL Q+HA +I G D + + +Y+ +++ +
Sbjct: 22 LLKGFKLVEDSNSITHLFQVHARLITSGNFWDSSWAIRLLKSSSRFGDSSYTVSIYRSI- 80
Query: 74 SPTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKS 133
+ N + K++ +S L + + G VPD+YT+ +I C GK
Sbjct: 81 -GKLYCANPVFKAYLVSSSPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKM 139
Query: 134 VHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGD 193
HG A++ G ++ + V SL+ MY CG + A+K+F + R++VSW +++ G V GD
Sbjct: 140 CHGQAIKHGCDQVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGD 199
Query: 194 VVEAKKLFDGMP 205
V+ A KLFD MP
Sbjct: 200 VLAAHKLFDEMP 211
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 90.5 bits (223), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 94/201 (46%), Gaps = 34/201 (16%)
Query: 18 ATLLKACKRTEHLQQIHACIIQRGLEQDQFLISNFI-SLAHS------------------ 58
+T LK+C TE LQQ+H+ I++ G E + +++S+ + S A +
Sbjct: 420 STALKSCCVTE-LQQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTS 478
Query: 59 ---LSTIA----------YSTTVFSRVLSPTTFLWNTLIKSHCQNSYFPATLSAFARMKA 105
L+ +A S + S + P T WN I + ++ Y + F M
Sbjct: 479 VVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQ 538
Query: 106 NGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLE-EDVFVGTSLIDMYGKCGEIG 164
+ PD YT+ ++ CS +C G S+HG + D FV LIDMYGKCG I
Sbjct: 539 SNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCGSIR 598
Query: 165 DARKVFDRMSGRNVVSWTAMV 185
KVF+ +N+++WTA++
Sbjct: 599 SVMKVFEETREKNLITWTALI 619
Score = 78.2 bits (191), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 77/158 (48%)
Query: 31 QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQN 90
+Q+H ++GL+ + ++++ IS + +F S WN +I + ++
Sbjct: 235 KQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKS 294
Query: 91 SYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVG 150
L F M +G P+ TY V+ S + G+ +HG ++ G E + +G
Sbjct: 295 ENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLG 354
Query: 151 TSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGY 188
+LID Y KCG + D+R FD + +N+V W A++ GY
Sbjct: 355 NALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGY 392
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 83/173 (47%), Gaps = 8/173 (4%)
Query: 19 TLLKACKRTEHL---QQIHACIIQ--RGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVL 73
+LL C++ + +HA I L Q ++ +N ISL L ++ + VF ++
Sbjct: 17 SLLNVCRKAPSFARTKALHALSITLCSVLLQPVYVCNNIISLYEKLGEVSLAGKVFDQMP 76
Query: 74 SPTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKS 133
+NT+IK + + F+ M+ G +P+ T ++ S R G
Sbjct: 77 ERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLLSCASLDVRA--GTQ 134
Query: 134 VHGSALRCGL-EEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMV 185
+HG +L+ GL D FVGT L+ +YG+ + A +VF+ M +++ +W M+
Sbjct: 135 LHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMM 187
Score = 61.2 bits (147), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 79/175 (45%), Gaps = 1/175 (0%)
Query: 32 QIHACIIQRGL-EQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQN 90
Q+H ++ GL D F+ + + L L + + VF + + WN ++
Sbjct: 134 QLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMMSLLGHR 193
Query: 91 SYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVG 150
+ + F + G+ ++ V+K S + K +H SA + GL+ ++ V
Sbjct: 194 GFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSATKKGLDCEISVV 253
Query: 151 TSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGMP 205
SLI YGKCG A ++F ++VSW A++ + + ++A KLF MP
Sbjct: 254 NSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMP 308
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 72/171 (42%), Gaps = 6/171 (3%)
Query: 31 QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQN 90
+QIH +I+ G E L + I + S F + WN L+ + N
Sbjct: 336 RQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGY-AN 394
Query: 91 SYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVG 150
P LS F +M G P YT+ +K+C E + +H +R G E++ +V
Sbjct: 395 KDGPICLSLFLQMLQMGFRPTEYTFSTALKSCCVT----ELQQLHSVIVRMGYEDNDYVL 450
Query: 151 TSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVG-YVAAGDVVEAKKL 200
+SL+ Y K + DA + D SG V +V G Y G E+ KL
Sbjct: 451 SSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKL 501
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 38/62 (61%)
Query: 143 LEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFD 202
L + V+V ++I +Y K GE+ A KVFD+M RN VS+ ++ GY GDV +A +F
Sbjct: 45 LLQPVYVCNNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFS 104
Query: 203 GM 204
M
Sbjct: 105 EM 106
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 90.5 bits (223), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 97/185 (52%), Gaps = 10/185 (5%)
Query: 19 TLLKACKRTEHLQQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTF 78
L+ CK ++L+QIHA II GL + +S + L+ S ++Y+ ++ ++ +P+ F
Sbjct: 14 NLISKCKSLQNLKQIHAQIITIGLSHHTYPLSKLLHLS-STVCLSYALSILRQIPNPSVF 72
Query: 79 LWNTLIKSHCQNSYFPATLSAFA------RMKANGSVPDTYTYPLVIKACSAMCR-GLEG 131
L+NTLI S N T AF+ ++N P+ +TYP + KA + G
Sbjct: 73 LYNTLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSLFKASGFDAQWHRHG 132
Query: 132 KSVHGSALRC--GLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYV 189
+++H L+ + D FV +L+ Y CG++ +AR +F+R+ ++ +W ++ Y
Sbjct: 133 RALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFERIREPDLATWNTLLAAYA 192
Query: 190 AAGDV 194
+ ++
Sbjct: 193 NSEEI 197
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 91/181 (50%), Gaps = 8/181 (4%)
Query: 29 HLQQIHACIIQ--RGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKS 86
H + +HA +++ + D+F+ + + + + + ++F R+ P WNTL+ +
Sbjct: 131 HGRALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFERIREPDLATWNTLLAA 190
Query: 87 HCQNSYFPA---TLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGL 143
+ + + L F RM+ P+ + +IK+C+ + + G H L+ L
Sbjct: 191 YANSEEIDSDEEVLLLFMRMQVR---PNELSLVALIKSCANLGEFVRGVWAHVYVLKNNL 247
Query: 144 EEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDG 203
+ FVGTSLID+Y KCG + ARKVFD MS R+V + AM+ G G E +L+
Sbjct: 248 TLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKS 307
Query: 204 M 204
+
Sbjct: 308 L 308
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/162 (21%), Positives = 71/162 (43%), Gaps = 2/162 (1%)
Query: 34 HACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQNSYF 93
H +++ L +QF+ ++ I L ++++ VF + +N +I+ + +
Sbjct: 239 HVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFG 298
Query: 94 PATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRC-GLEEDVFVGTS 152
+ + + + G VPD+ T+ + I ACS EG + S G+E V
Sbjct: 299 QEGIELYKSLISQGLVPDSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGC 358
Query: 153 LIDMYGKCGEIGDARKVFDRMSGR-NVVSWTAMVVGYVAAGD 193
L+D+ G+ G + +A + +M + N W + + GD
Sbjct: 359 LVDLLGRSGRLEEAEECIKKMPVKPNATLWRSFLGSSQTHGD 400
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 90.1 bits (222), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 86/175 (49%)
Query: 31 QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQN 90
+++H +++ GL + ++ + + + + + VF R F WN +I + +
Sbjct: 155 KKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRM 214
Query: 91 SYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVG 150
+ ++ M+ N P + T LV+ ACS + K VH C E + +
Sbjct: 215 KEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLE 274
Query: 151 TSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGMP 205
+L++ Y CGE+ A ++F M R+V+SWT++V GYV G++ A+ FD MP
Sbjct: 275 NALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMP 329
Score = 87.8 bits (216), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 91/189 (48%), Gaps = 3/189 (1%)
Query: 19 TLLKACKRTEHLQQIHACIIQRGLEQD-QFLISNFISLAHSLS-TIAYSTTVFSRVLSPT 76
++L CK T+ +Q+H+ I RG+ + F F+ L ++Y+ +F ++ P
Sbjct: 39 SILGVCKTTDQFKQLHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVSYAYKLFVKIPEPD 98
Query: 77 TFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLE-GKSVH 135
+WN +IK + + + M G PD++T+P ++ L GK +H
Sbjct: 99 VVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLH 158
Query: 136 GSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVV 195
++ GL +++V +L+ MY CG + AR VFDR +V SW M+ GY +
Sbjct: 159 CHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYE 218
Query: 196 EAKKLFDGM 204
E+ +L M
Sbjct: 219 ESIELLVEM 227
Score = 80.9 bits (198), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 72/144 (50%)
Query: 61 TIAYSTTVFSRVLSPTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIK 120
+ + T F ++ W +I + + F +L F M++ G +PD +T V+
Sbjct: 317 NLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLT 376
Query: 121 ACSAMCRGLEGKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVS 180
AC+ + G+ + + ++ DV VG +LIDMY KCG A+KVF M R+ +
Sbjct: 377 ACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFT 436
Query: 181 WTAMVVGYVAAGDVVEAKKLFDGM 204
WTAMVVG G EA K+F M
Sbjct: 437 WTAMVVGLANNGQGQEAIKVFFQM 460
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 92/181 (50%), Gaps = 10/181 (5%)
Query: 20 LLKACKRTEHL---QQIHACIIQRGLEQ----DQFLISNFISLAHSLSTIAYSTTVFSRV 72
LL AC EH + +H +I++GLEQ LIS +I T+ + ++F +
Sbjct: 311 LLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFP--TGTMEDALSLFESL 368
Query: 73 LSPTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGK 132
S WN++I Q + F+ ++++ D Y + ++++CS + G+
Sbjct: 369 KSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQ 428
Query: 133 SVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRN-VVSWTAMVVGYVAA 191
+H A + G + FV +SLI MY KCG I ARK F ++S ++ V+W AM++GY
Sbjct: 429 QIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQH 488
Query: 192 G 192
G
Sbjct: 489 G 489
Score = 88.6 bits (218), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 84/170 (49%)
Query: 28 EHLQQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSH 87
+ L H I+ G D ++ + + + Y+ +F + + WNT+I +
Sbjct: 17 QKLSLTHCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGY 76
Query: 88 CQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDV 147
F MK +GS D Y++ ++K +++ R G+ VHG ++ G E +V
Sbjct: 77 TSCGKLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNV 136
Query: 148 FVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEA 197
+VG+SL+DMY KC + DA + F +S N VSW A++ G+V D+ A
Sbjct: 137 YVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTA 186
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 90/175 (51%), Gaps = 3/175 (1%)
Query: 30 LQQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFL-WNTLIKSHC 88
L+Q+HA +++ GL+ + + + IS +++ + VF + + WN++I
Sbjct: 222 LKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFS 281
Query: 89 QNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVF 148
++ + F +M+ + D YTY ++ ACS + GKS+HG ++ GLE+
Sbjct: 282 KHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTS 341
Query: 149 VGTSLIDMYGK--CGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLF 201
+LI MY + G + DA +F+ + ++++SW +++ G+ G +A K F
Sbjct: 342 ATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFF 396
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 40/70 (57%)
Query: 135 HGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDV 194
H A++CG D++V ++D Y K G +G A +FD M R+ VSW M+ GY + G +
Sbjct: 23 HCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKL 82
Query: 195 VEAKKLFDGM 204
+A LF M
Sbjct: 83 EDAWCLFTCM 92
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 89.7 bits (221), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 89/187 (47%), Gaps = 3/187 (1%)
Query: 21 LKACKRTEHLQ---QIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTT 77
LKAC + L+ IHA I++R + DQ + + + L + VF +
Sbjct: 243 LKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNV 302
Query: 78 FLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGS 137
WN+LI + + F +M+ T ++ ACS + L GK +H
Sbjct: 303 VTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQ 362
Query: 138 ALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEA 197
L+ + DV + SL+DMYGKCGE+ +R+VFD M +++ SW M+ Y G++ E
Sbjct: 363 ILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEV 422
Query: 198 KKLFDGM 204
LF+ M
Sbjct: 423 INLFEWM 429
Score = 60.8 bits (146), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 97/206 (47%), Gaps = 23/206 (11%)
Query: 19 TLLKACKRTEHL---QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSP 75
T+L AC R L ++IHA I++ + D L+++ + + + YS VF +L+
Sbjct: 342 TILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTK 401
Query: 76 TTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVH 135
WN ++ + N ++ F M +G PD T+ ++ CS G + +
Sbjct: 402 DLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDT-----GLTEY 456
Query: 136 GSALRCGLEEDVFVGTS------LIDMYGKCGEIGDARKVFDRMSGRNVVS-WTAMVV-- 186
G +L ++ + V + L+D+ G+ G+I +A KV + M + S W +++
Sbjct: 457 GLSLFERMKTEFRVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSC 516
Query: 187 ---GYVAAGDVVEAKKLFDGMP--PG 207
G V+ G++ AK+LF P PG
Sbjct: 517 RLHGNVSVGEIA-AKELFVLEPHNPG 541
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 82/192 (42%), Gaps = 7/192 (3%)
Query: 20 LLKAC---KRTEHLQQIHACIIQR-GLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSP 75
LL AC K H +I + I+ L + L+S I+L + + +F V
Sbjct: 137 LLHACISAKSLHHGIKICSLILNNPSLRHNPKLLSKLITLFSVCRRLDLARKIFDDVTDS 196
Query: 76 ---TTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGK 132
T +W + + +N L + M + P ++ + +KAC + G+
Sbjct: 197 SLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGNFSISVALKACVDLKDLRVGR 256
Query: 133 SVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAG 192
+H ++ + D V L+ +Y + G DARKVFD MS RNVV+W +++
Sbjct: 257 GIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLISVLSKKV 316
Query: 193 DVVEAKKLFDGM 204
V E LF M
Sbjct: 317 RVHEMFNLFRKM 328
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 70/122 (57%), Gaps = 1/122 (0%)
Query: 84 IKSHCQNSYFPATLSAFARMKANGSVP-DTYTYPLVIKACSAMCRGLEGKSVHGSALRCG 142
+ S+ L+ F +M ++ ++P D + + L +K+C+A R + G SVH +++
Sbjct: 19 LSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVHAHSVKSN 78
Query: 143 LEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFD 202
+ FVG +L+DMYGKC + ARK+FD + RN V W AM+ Y G V EA +L++
Sbjct: 79 FLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKEAVELYE 138
Query: 203 GM 204
M
Sbjct: 139 AM 140
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 50/95 (52%)
Query: 110 PDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKV 169
P+ T ++ ACSA+ K +H A R +E + + L++ YG+CG I + V
Sbjct: 180 PNLITLLALVSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLV 239
Query: 170 FDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
FD M R+VV+W++++ Y GD A K F M
Sbjct: 240 FDSMEDRDVVAWSSLISAYALHGDAESALKTFQEM 274
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 100/203 (49%), Gaps = 31/203 (15%)
Query: 31 QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSR--VLSPTTF---------- 78
+QIH +++ GL+ + ++ ++ +++ +A + +VF L +F
Sbjct: 61 RQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHAKLDSASFNIMVDGYVRS 120
Query: 79 --LWN-----------------TLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVI 119
LW+ TLIK + QN+ + + F M+ G + + T VI
Sbjct: 121 RRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMRNLGIMLNEVTLATVI 180
Query: 120 KACSAMCRGLEGKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVV 179
ACS + + + + A++ LE VFV T+L+ MY C + DARK+FD M RN+V
Sbjct: 181 SACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPERNLV 240
Query: 180 SWTAMVVGYVAAGDVVEAKKLFD 202
+W M+ GY AG + +A++LFD
Sbjct: 241 TWNVMLNGYSKAGLIEQAEELFD 263
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 44/75 (58%)
Query: 131 GKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVA 190
G+ +H L+ GL+ + ++ S+++MY KC + DA VF + + S+ MV GYV
Sbjct: 60 GRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHAKLDSASFNIMVDGYVR 119
Query: 191 AGDVVEAKKLFDGMP 205
+ + +A KLFD MP
Sbjct: 120 SRRLWDALKLFDVMP 134
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 80/208 (38%), Gaps = 35/208 (16%)
Query: 32 QIHACIIQRGLEQDQFL---------ISNFISLA----------HSLS------------ 60
Q+H I++RG + FL +SN I LA H S
Sbjct: 326 QLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNG 385
Query: 61 TIAYSTTVFSRVLSPTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSV-PDTYTYPLVI 119
+ + VF + F WN +I + Q+ L F M ++ V PD T V
Sbjct: 386 MVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVF 445
Query: 120 KACSAMCRGLEGKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDR---MSGR 176
A S++ EGK H + + + ++IDMY KCG I A +F + +S
Sbjct: 446 SAISSLGSLEEGKRAHDYLNFSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSS 505
Query: 177 NVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
+ W A++ G G A L+ +
Sbjct: 506 TISPWNAIICGSATHGHAKLALDLYSDL 533
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 87/170 (51%), Gaps = 2/170 (1%)
Query: 33 IHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQNSY 92
+H I++ D + + L L ++ + VF+ + W+ +I CQN +
Sbjct: 269 VHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGF 328
Query: 93 FPATLSAFARMKANGSVPDTYTYPLVIKACS-AMCRGLEGKSVHGSALRCGLEEDVFVGT 151
+ F RM+ VP+ +T ++ C+ C GL G+ +HG ++ G + D++V
Sbjct: 329 CNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGL-GEQLHGLVVKVGFDLDIYVSN 387
Query: 152 SLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLF 201
+LID+Y KC ++ A K+F +S +N VSW ++VGY G+ +A +F
Sbjct: 388 ALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMF 437
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 88/182 (48%)
Query: 20 LLKACKRTEHLQQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFL 79
L + + E +H+ I++ G + + F+ + I+ ++ + TVF +L +
Sbjct: 155 LFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVV 214
Query: 80 WNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSAL 139
W ++ + +N YF +L + M+ G +P+ YT+ +KA + K VHG L
Sbjct: 215 WAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQIL 274
Query: 140 RCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKK 199
+ D VG L+ +Y + G++ DA KVF+ M +VV W+ M+ + G EA
Sbjct: 275 KTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVD 334
Query: 200 LF 201
LF
Sbjct: 335 LF 336
Score = 81.3 bits (199), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 82/174 (47%)
Query: 31 QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQN 90
+Q+H +++ G + D ++ + I + + + +F+ + S WNT+I +
Sbjct: 368 EQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENL 427
Query: 91 SYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVG 150
S F N T+ + AC+++ G VHG A++ + V V
Sbjct: 428 GEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVS 487
Query: 151 TSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
SLIDMY KCG+I A+ VF+ M +V SW A++ GY G +A ++ D M
Sbjct: 488 NSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIM 541
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/175 (21%), Positives = 78/175 (44%), Gaps = 6/175 (3%)
Query: 31 QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSH-CQ 89
+ IH I+++G D F + ++ + +F + + TL + + CQ
Sbjct: 69 KAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYACQ 128
Query: 90 NSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFV 149
+ + ++R+ G + + + +K ++ + +H ++ G + + FV
Sbjct: 129 D-----PIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFV 183
Query: 150 GTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
G +LI+ Y CG + AR VF+ + +++V W +V YV G ++ KL M
Sbjct: 184 GAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCM 238
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 83/174 (47%)
Query: 31 QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQN 90
QQIH I+ GLE D + S+ + + V + WNTLI + QN
Sbjct: 111 QQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQN 170
Query: 91 SYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVG 150
L + MK +G P+ T+ V+ +CS + +G+ +H A++ G V V
Sbjct: 171 GCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVV 230
Query: 151 TSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
+SLI MY KCG +GDA K F + V W++M+ Y G EA +LF+ M
Sbjct: 231 SSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTM 284
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 57/125 (45%)
Query: 68 VFSRVLSPTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCR 127
VF + WN +I Q + LS F M G PD YT V + +
Sbjct: 47 VFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRS 106
Query: 128 GLEGKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVG 187
G+ +HG ++ GLE D+ V +SL MY + G++ D V M RN+V+W +++G
Sbjct: 107 VSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMG 166
Query: 188 YVAAG 192
G
Sbjct: 167 NAQNG 171
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 33/52 (63%)
Query: 154 IDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGMP 205
+ MY K G+ A V+ RM +N +S ++ GYV AGD+V A+K+FD MP
Sbjct: 1 MSMYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMP 52
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 84/176 (47%), Gaps = 1/176 (0%)
Query: 31 QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQN 90
+Q+H + + G + L ++ + + ++ + VF + P WN+L+ + Q+
Sbjct: 75 RQLHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQS 134
Query: 91 SYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEE-DVFV 149
F + F + + P+ +++ + AC+ + G +H ++ GLE+ +V V
Sbjct: 135 GRFQEGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVV 194
Query: 150 GTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGMP 205
G LIDMYGKCG + DA VF M ++ VSW A+V G + F MP
Sbjct: 195 GNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQMP 250
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 73/137 (53%)
Query: 68 VFSRVLSPTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCR 127
V S + +P + WNT++ + + F +M ++G D Y+ +V+ A +A+
Sbjct: 276 VLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAAVAALAV 335
Query: 128 GLEGKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVG 187
G +H A + GL+ V V ++LIDMY KCG + A +F M +N++ W M+ G
Sbjct: 336 VPWGSLIHACAHKLGLDSRVVVASALIDMYSKCGMLKHAELMFWTMPRKNLIVWNEMISG 395
Query: 188 YVAAGDVVEAKKLFDGM 204
Y GD +EA KLF+ +
Sbjct: 396 YARNGDSIEAIKLFNQL 412
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 88.6 bits (218), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 82/164 (50%), Gaps = 2/164 (1%)
Query: 31 QQIHACIIQRGL-EQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQ 89
+QIH +++ G+ D + + + + + + VF + P W+ L+ + +
Sbjct: 136 KQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQPDVVKWDVLMNGYVR 195
Query: 90 NSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHG-SALRCGLEEDVF 148
L F M G PD ++ + AC+ + +GK +H + +E DVF
Sbjct: 196 CGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKSWIESDVF 255
Query: 149 VGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAG 192
VGT+L+DMY KCG I A +VF +++ RNV SW A++ GY A G
Sbjct: 256 VGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAAYG 299
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 91/191 (47%), Gaps = 8/191 (4%)
Query: 22 KACKRTEHLQQIHACIIQRGLEQDQFLISN----FISLAHSLSTIAYSTTVFSRVLSPTT 77
+ C + ++ H+ I GL ++ + IS F+ L + Y++++F + P +
Sbjct: 19 QRCNTVKQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPNS 78
Query: 78 FLWNTLIKSHCQNSYFPATLSAFARM---KANGSVPDTYTYPLVIKACSAMCRGLEGKSV 134
F+++T+I+ ++S L F M + P T+ +I AC C GK +
Sbjct: 79 FVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDIAPSYLTFHFLIVACLKACFFSVGKQI 138
Query: 135 HGSALRCGL-EEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGD 193
H ++ G+ D V T ++ +Y + + DARKVFD + +VV W ++ GYV G
Sbjct: 139 HCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQPDVVKWDVLMNGYVRCGL 198
Query: 194 VVEAKKLFDGM 204
E ++F M
Sbjct: 199 GSEGLEVFREM 209
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 88.6 bits (218), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 74/138 (53%), Gaps = 1/138 (0%)
Query: 69 FSRVLSPTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRG 128
F R+ + WN ++ + QN + L F M G P+ T+ +VI ACS
Sbjct: 221 FDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADP 280
Query: 129 LEGKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRM-SGRNVVSWTAMVVG 187
+S+ + + FV T+L+DM+ KC +I AR++F+ + + RN+V+W AM+ G
Sbjct: 281 SLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISG 340
Query: 188 YVAAGDVVEAKKLFDGMP 205
Y GD+ A++LFD MP
Sbjct: 341 YTRIGDMSSARQLFDTMP 358
Score = 87.0 bits (214), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 84/181 (46%), Gaps = 7/181 (3%)
Query: 29 HLQQIHA-CIIQRGLEQDQFLISNFISLAHSLSTIAYSTT-VFSRVLSPTTFLWNTLIKS 86
L QIHA I+ L + + S IS L +Y T +F V P F+ N++ K
Sbjct: 21 QLNQIHAQLIVFNSLPRQSYWASRIISCCTRLRAPSYYTRLIFDSVTFPNVFVVNSMFKY 80
Query: 87 HCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEED 146
+ L + + G +PD +++P+VIK+ G G + G +D
Sbjct: 81 FSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKSA-----GRFGILFQALVEKLGFFKD 135
Query: 147 VFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGMPP 206
+V ++DMY K + ARKVFD++S R W M+ GY G+ EA KLFD MP
Sbjct: 136 PYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISGYWKWGNKEEACKLFDMMPE 195
Query: 207 G 207
Sbjct: 196 N 196
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 77/186 (41%), Gaps = 1/186 (0%)
Query: 20 LLKACKRTEHLQQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFL 79
LL + +Q + G +++ + IS + ++ + +F +
Sbjct: 305 LLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVS 364
Query: 80 WNTLIKSHCQNSYFPATLSAFARMKANG-SVPDTYTYPLVIKACSAMCRGLEGKSVHGSA 138
WN+LI + N + F M G S PD T V+ AC M G +
Sbjct: 365 WNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYI 424
Query: 139 LRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAK 198
+ ++ + SLI MY + G + +A++VFD M R+VVS+ + + A GD VE
Sbjct: 425 RKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVETL 484
Query: 199 KLFDGM 204
L M
Sbjct: 485 NLLSKM 490
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 37/61 (60%)
Query: 144 EEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDG 203
E DV T +I + K ++ +ARK FDRM ++VVSW AM+ GY G +A +LF+
Sbjct: 195 ENDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFND 254
Query: 204 M 204
M
Sbjct: 255 M 255
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 88.6 bits (218), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 86/174 (49%), Gaps = 2/174 (1%)
Query: 31 QQIHACIIQRGL-EQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQ 89
+QIH +++ G+ D + + + + + + VF + P W+ L+ + +
Sbjct: 136 KQIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQPDVVKWDVLMNGYVR 195
Query: 90 NSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRC-GLEEDVF 148
L F M G PD ++ + AC+ + +GK +H + +E DVF
Sbjct: 196 CGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVF 255
Query: 149 VGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFD 202
VGT+L+DMY KCG I A +VF++++ RNV SW A++ GY A G +A D
Sbjct: 256 VGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTCLD 309
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 91/191 (47%), Gaps = 8/191 (4%)
Query: 22 KACKRTEHLQQIHACIIQRGLEQDQFLISN----FISLAHSLSTIAYSTTVFSRVLSPTT 77
+ C + ++ H+ I GL ++ + IS F+ L + Y++++F + P +
Sbjct: 19 QRCNTVKQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPNS 78
Query: 78 FLWNTLIKSHCQNSYFPATLSAFARM---KANGSVPDTYTYPLVIKACSAMCRGLEGKSV 134
F+++T+I+ ++S L F M + P T+ +I AC C GK +
Sbjct: 79 FVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIVACLKACFFSVGKQI 138
Query: 135 HGSALRCGL-EEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGD 193
H ++ G+ D V T ++ +Y + + DARKVFD + +VV W ++ GYV G
Sbjct: 139 HCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQPDVVKWDVLMNGYVRCGL 198
Query: 194 VVEAKKLFDGM 204
E ++F M
Sbjct: 199 GSEGLEVFKEM 209
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 88.2 bits (217), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 90/190 (47%), Gaps = 3/190 (1%)
Query: 18 ATLLKAC---KRTEHLQQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLS 74
+ +LKAC K E+ +QIHA I + + D+F+ S I L + + F+
Sbjct: 362 SVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFASTSK 421
Query: 75 PTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSV 134
W ++I H QN + F ++ ++ P+ YT L++ AC+ G+ +
Sbjct: 422 QDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALSSGEQI 481
Query: 135 HGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDV 194
G A++ G++ V TS I MY K G + A +VF + +V +++AM+ G
Sbjct: 482 QGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVATYSAMISSLAQHGSA 541
Query: 195 VEAKKLFDGM 204
EA +F+ M
Sbjct: 542 NEALNIFESM 551
Score = 88.2 bits (217), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 90/183 (49%), Gaps = 14/183 (7%)
Query: 33 IHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQNSY 92
+H ++ GL Q FLI+ I + + + ++F R WN+LI + +
Sbjct: 170 LHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGA 229
Query: 93 FPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGL------EGKSVHGSALRCGLEED 146
L+ A+M +G TY V+KAC C L +G ++H + G+E D
Sbjct: 230 AEEPLNLLAKMHRDGLNLTTYALGSVLKAC---CINLNEGFIEKGMAIHCYTAKLGMEFD 286
Query: 147 VFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVV-----EAKKLF 201
+ V T+L+DMY K G + +A K+F M +NVV++ AM+ G++ ++ EA KLF
Sbjct: 287 IVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLF 346
Query: 202 DGM 204
M
Sbjct: 347 MDM 349
Score = 82.0 bits (201), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 68/143 (47%)
Query: 62 IAYSTTVFSRVLSPTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKA 121
+ ++ +F R+ +N+LI + Q ++ + F + D +TY +
Sbjct: 98 LGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGF 157
Query: 122 CSAMCRGLEGKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSW 181
C C G+ +HG + GL + VF+ LIDMY KCG++ A +FDR R+ VSW
Sbjct: 158 CGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSW 217
Query: 182 TAMVVGYVAAGDVVEAKKLFDGM 204
+++ GYV G E L M
Sbjct: 218 NSLISGYVRVGAAEEPLNLLAKM 240
Score = 67.0 bits (162), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 81/175 (46%), Gaps = 7/175 (4%)
Query: 33 IHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQNSY 92
IH + G+E D + + + + ++ + +FS + S +N +I Q
Sbjct: 274 IHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDE 333
Query: 93 FPATLSA-----FARMKANGSVPDTYTYPLVIKACSAMCRGLE-GKSVHGSALRCGLEED 146
S+ F M+ G P T+ +V+KACSA + LE G+ +H + + D
Sbjct: 334 ITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSA-AKTLEYGRQIHALICKNNFQSD 392
Query: 147 VFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLF 201
F+G++LI++Y G D + F S +++ SWT+M+ +V + A LF
Sbjct: 393 EFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLF 447
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 54/91 (59%)
Query: 111 DTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVF 170
D+ Y ++ + + + GK HG ++ L +++ +L++MY KC E+G AR++F
Sbjct: 46 DSEGYKILFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLF 105
Query: 171 DRMSGRNVVSWTAMVVGYVAAGDVVEAKKLF 201
DRM RN++S+ +++ GY G +A +LF
Sbjct: 106 DRMPERNIISFNSLISGYTQMGFYEQAMELF 136
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 88.2 bits (217), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 71/127 (55%), Gaps = 5/127 (3%)
Query: 80 WNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSAL 139
+N +I + ++ L RM ++G D +TYP VI+AC+ GK VH L
Sbjct: 254 YNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVL 313
Query: 140 RCGLEEDV--FVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEA 197
R ED SL+ +Y KCG+ +AR +F++M +++VSW A++ GYV++G + EA
Sbjct: 314 R---REDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEA 370
Query: 198 KKLFDGM 204
K +F M
Sbjct: 371 KLIFKEM 377
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 82/186 (44%), Gaps = 4/186 (2%)
Query: 19 TLLKACKRTEHLQQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTF 78
+L C + + + I + + L L+S ++S H I + +F +
Sbjct: 328 SLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGH----IGEAKLIFKEMKEKNIL 383
Query: 79 LWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSA 138
W +I +N + L F+ MK G P Y + IK+C+ + G+ H
Sbjct: 384 SWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQL 443
Query: 139 LRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAK 198
L+ G + + G +LI MY KCG + +AR+VF M + VSW A++ G EA
Sbjct: 444 LKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAV 503
Query: 199 KLFDGM 204
+++ M
Sbjct: 504 DVYEEM 509
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 81/170 (47%), Gaps = 9/170 (5%)
Query: 43 EQDQFLISNFISLAHSLSTIAYSTTVFSR--VLSPTTFLWNTLIKSHCQNSYFPATLSAF 100
E D+ + +S + I + VF + V T ++N +I N+ + ++ F
Sbjct: 77 EPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLF 136
Query: 101 ARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSV--HGSALRCGLEEDVFVGTSLIDMYG 158
+MK G PD +T+ V+ A A+ E + V H +AL+ G V +L+ +Y
Sbjct: 137 CKMKHEGFKPDNFTFASVL-AGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYS 195
Query: 159 KCGE----IGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
KC + ARKVFD + ++ SWT M+ GYV G ++L +GM
Sbjct: 196 KCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGM 245
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 45/75 (60%)
Query: 131 GKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVA 190
++VHG+ + G + + LID+Y K E+ AR++FD +S + ++ T MV GY A
Sbjct: 33 ARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVSGYCA 92
Query: 191 AGDVVEAKKLFDGMP 205
+GD+ A+ +F+ P
Sbjct: 93 SGDITLARGVFEKAP 107
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 87.8 bits (216), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 82/173 (47%), Gaps = 1/173 (0%)
Query: 33 IHACIIQRGLEQ-DQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQNS 91
+ AC + +E D L+++ I + S I + VF R+ + + WN++ QN
Sbjct: 370 MEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNG 429
Query: 92 YFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVGT 151
TL F +M D + VI AC+++ G+ V A GL+ D V +
Sbjct: 430 CTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQVVSS 489
Query: 152 SLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
SLID+Y KCG + R+VFD M + V W +M+ GY G EA LF M
Sbjct: 490 SLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKM 542
Score = 85.1 bits (209), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 106/251 (42%), Gaps = 66/251 (26%)
Query: 19 TLLKACKRTEHLQ---QIHACIIQRGLEQDQFLISNFISL-------------------- 55
T+LKAC E L+ QIHA I+ G+E D + S+ +++
Sbjct: 192 TVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREP 251
Query: 56 -AHSLST----------IAYSTTVFSRVLSPTTFLWNTLIKSHCQNSYFPATLSAFARMK 104
HSLS + S +F R + LWN++I + N+ L F M+
Sbjct: 252 DDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMR 311
Query: 105 ANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVGTSLIDMYGK----- 159
N + D+ T VI AC + GK +H A + GL +D+ V ++L+DMY K
Sbjct: 312 -NETREDSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPM 370
Query: 160 --------------------------CGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGD 193
CG I DA++VF+R+ ++++SW +M G+ G
Sbjct: 371 EACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGC 430
Query: 194 VVEAKKLFDGM 204
VE + F M
Sbjct: 431 TVETLEYFHQM 441
Score = 63.5 bits (153), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 51/93 (54%), Gaps = 1/93 (1%)
Query: 115 YPLVIKACSAMCRGLEGKSVHGSALRCG-LEEDVFVGTSLIDMYGKCGEIGDARKVFDRM 173
Y ++++CS+ R + +G L+ G L V V L+ MY + G++G AR +FD M
Sbjct: 29 YVRLLQSCSSRNRETLWRQTNGLLLKKGFLSSIVIVANHLLQMYSRSGKMGIARNLFDEM 88
Query: 174 SGRNVVSWTAMVVGYVAAGDVVEAKKLFDGMPP 206
RN SW M+ GY+ +G+ + + FD MP
Sbjct: 89 PDRNYFSWNTMIEGYMNSGEKGTSLRFFDMMPE 121
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 68/155 (43%), Gaps = 34/155 (21%)
Query: 81 NTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALR 140
N+L+ + N Y L F + + D T V+KAC+ + GK +H L
Sbjct: 159 NSLLHGYILNGYAEEALRLFKELNFSA---DAITLTTVLKACAELEALKCGKQIHAQILI 215
Query: 141 CGLEEDVFVGTSLIDMYGKCGE-------------------------------IGDARKV 169
G+E D + +SL+++Y KCG+ + ++R +
Sbjct: 216 GGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALISGYANCGRVNESRGL 275
Query: 170 FDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
FDR S R V+ W +M+ GY+A +EA LF+ M
Sbjct: 276 FDRKSNRCVILWNSMISGYIANNMKMEALVLFNEM 310
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 81/187 (43%), Gaps = 5/187 (2%)
Query: 18 ATLLKACKRTEHLQ---QIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLS 74
++++ AC L+ Q+ A GL+ DQ + S+ I L + + VF ++
Sbjct: 454 SSVISACASISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVK 513
Query: 75 PTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSV 134
WN++I + N + F +M G P T+ +V+ AC+ EG+ +
Sbjct: 514 SDEVPWNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRKL 573
Query: 135 HGS-ALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMS-GRNVVSWTAMVVGYVAAG 192
S + G D + ++D+ + G + +A + + M + W++++ G VA G
Sbjct: 574 FESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAINLVEEMPFDVDGSMWSSILRGCVANG 633
Query: 193 DVVEAKK 199
KK
Sbjct: 634 YKAMGKK 640
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 87.8 bits (216), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 72/127 (56%), Gaps = 2/127 (1%)
Query: 80 WNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSAL 139
WN ++ S F ++S + M +GS PD +++P ++K+C+++ + G+ +H
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVT 80
Query: 140 RCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDR--MSGRNVVSWTAMVVGYVAAGDVVEA 197
+ G E + FV T+LI MY KCG + DARKVF+ S + V + A++ GY A V +A
Sbjct: 81 KGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDA 140
Query: 198 KKLFDGM 204
+F M
Sbjct: 141 AYMFRRM 147
Score = 87.0 bits (214), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 90/188 (47%), Gaps = 3/188 (1%)
Query: 20 LLKACKRTEHL---QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPT 76
L+ C E+L + +H ++ GL+ + ++++FI++ ++ +F +
Sbjct: 162 LVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKG 221
Query: 77 TFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHG 136
WN +I + QN L + +MK++G PD +T V+ +C+ + G V
Sbjct: 222 LITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGK 281
Query: 137 SALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVE 196
G +VFV + I MY +CG + AR VFD M +++VSWTAM+ Y G
Sbjct: 282 LVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEI 341
Query: 197 AKKLFDGM 204
LFD M
Sbjct: 342 GLMLFDDM 349
>AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11394744-11395973 REVERSE
LENGTH=409
Length = 409
Score = 87.4 bits (215), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 90/193 (46%), Gaps = 7/193 (3%)
Query: 20 LLKAC---KRTEHLQQIHACIIQRGL--EQDQFLISNFISLAHSLSTIAYSTTVFSRVLS 74
+LKAC + E +Q+HA + G E+D +L + I + + V ++ +
Sbjct: 199 VLKACAMIRDFELGKQVHALCHKLGFIDEEDSYLSGSLIRFYGEFRCLEDANLVLHQLSN 258
Query: 75 PTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRG-LEGKS 133
T W + + + F + F M +G + + V+KACS + G G+
Sbjct: 259 ANTVAWAAKVTNDYREGEFQEVIRDFIEMGNHGIKKNVSVFSNVLKACSWVSDGGRSGQQ 318
Query: 134 VHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVS-WTAMVVGYVAAG 192
VH +A++ G E D + LI+MYGK G++ DA KVF VS W AMV Y+ G
Sbjct: 319 VHANAIKLGFESDCLIRCRLIEMYGKYGKVKDAEKVFKSSKDETSVSCWNAMVASYMQNG 378
Query: 193 DVVEAKKLFDGMP 205
+EA KL M
Sbjct: 379 IYIEAIKLLYQMK 391
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 87.4 bits (215), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 93/190 (48%), Gaps = 5/190 (2%)
Query: 20 LLKACKRTEHLQ---QIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSP- 75
LLKAC + ++ ++H+ +++ G F+++ +S+ ++ + +F
Sbjct: 188 LLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKG 247
Query: 76 TTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVH 135
LWN+++ S+ + TL F M G P++YT + AC GK +H
Sbjct: 248 DAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIH 307
Query: 136 GSALRCGLEE-DVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDV 194
S L+ +++V +LI MY +CG++ A ++ +M+ +VV+W +++ GYV
Sbjct: 308 ASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMY 367
Query: 195 VEAKKLFDGM 204
EA + F M
Sbjct: 368 KEALEFFSDM 377
Score = 84.7 bits (208), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 83/172 (48%), Gaps = 1/172 (0%)
Query: 31 QQIHACIIQRGLEQDQFLISN-FISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQ 89
++IHA +++ + + N I++ + + + ++ + WN+LIK + Q
Sbjct: 304 KEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQ 363
Query: 90 NSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFV 149
N + L F+ M A G D + +I A + L G +H ++ G + ++ V
Sbjct: 364 NLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQV 423
Query: 150 GTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLF 201
G +LIDMY KC + F RM ++++SWT ++ GY VEA +LF
Sbjct: 424 GNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELF 475
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 81/173 (46%), Gaps = 1/173 (0%)
Query: 32 QIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQNS 91
++HA +I+ G + + + + I + + Y F R+ W T+I + QN
Sbjct: 407 ELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQND 466
Query: 92 YFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVGT 151
L F + D +++A S + L K +H LR GL D +
Sbjct: 467 CHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGL-LDTVIQN 525
Query: 152 SLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
L+D+YGKC +G A +VF+ + G++VVSWT+M+ G+ EA +LF M
Sbjct: 526 ELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRM 578
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 85/175 (48%), Gaps = 1/175 (0%)
Query: 30 LQQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQ 89
+++IH I+++GL D + + + + + Y+T VF + W ++I S
Sbjct: 506 VKEIHCHILRKGL-LDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSAL 564
Query: 90 NSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFV 149
N + F RM G D+ ++ A +++ +G+ +H LR G + +
Sbjct: 565 NGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSI 624
Query: 150 GTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
+++DMY CG++ A+ VFDR+ + ++ +T+M+ Y G A +LFD M
Sbjct: 625 AVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKM 679
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 84/177 (47%), Gaps = 4/177 (2%)
Query: 31 QQIHACIIQR--GLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHC 88
+Q+H+ I + E D FL + + ++ + VF + T F WNT+I ++
Sbjct: 100 RQLHSRIFKTFPSFELD-FLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYV 158
Query: 89 QNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVF 148
N + L+ + M+ G ++P ++KAC+ + G +H ++ G F
Sbjct: 159 SNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGF 218
Query: 149 VGTSLIDMYGKCGEIGDARKVFDRMSGR-NVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
+ +L+ MY K ++ AR++FD + + V W +++ Y +G +E +LF M
Sbjct: 219 IVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREM 275
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 87.4 bits (215), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 80/177 (45%), Gaps = 4/177 (2%)
Query: 20 LLKACKRTEHLQ---QIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPT 76
+L CK++ H+ +H I+ GL +++ I++ + +F ++
Sbjct: 353 ILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETP 412
Query: 77 TFLWNTLIKSHCQNSYFPATLSAFARMKANGSV-PDTYTYPLVIKACSAMCRGLEGKSVH 135
WN++I Q+ F +M G + PD T ++ CS +C GK +H
Sbjct: 413 LISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELH 472
Query: 136 GSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAG 192
G LR E + FV T+LIDMY KCG A VF + +W +M+ GY +G
Sbjct: 473 GYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSG 529
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 82/176 (46%)
Query: 29 HLQQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHC 88
++Q+ + + GL++ ++ ++ ++L + + +F + T +WN LI +
Sbjct: 68 QVEQVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYS 127
Query: 89 QNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVF 148
+N Y F M G P T ++ C +G+SVHG A + GLE D
Sbjct: 128 RNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQ 187
Query: 149 VGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
V +LI Y KC E+G A +F M ++ VSW M+ Y +G EA +F M
Sbjct: 188 VKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNM 243
Score = 57.8 bits (138), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 68/138 (49%), Gaps = 7/138 (5%)
Query: 71 RVLSPTTFL-----WNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAM 125
R+ P T +++L+KS + ++ F + + P+ +T + ++A +
Sbjct: 2 RITKPITLYRDLSYFHSLLKSCIHGEISSSPITIFRDLLRSSLTPNHFTMSIFLQATTTS 61
Query: 126 CRG--LEGKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTA 183
L+ + V + GL+ V+V TSL+++Y K G + A+ +FD M R+ V W A
Sbjct: 62 FNSFKLQVEQVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNA 121
Query: 184 MVVGYVAAGDVVEAKKLF 201
++ GY G +A KLF
Sbjct: 122 LICGYSRNGYECDAWKLF 139
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 87.0 bits (214), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 49/135 (36%), Positives = 68/135 (50%), Gaps = 3/135 (2%)
Query: 74 SPTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLE--G 131
S TT W + I +N F+ M G P+ T+ ++ C G E G
Sbjct: 33 SETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEALG 92
Query: 132 KSVHGSALRCGLEED-VFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVA 190
+HG A + GL+ + V VGT++I MY K G AR VFD M +N V+W M+ GY+
Sbjct: 93 DLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMR 152
Query: 191 AGDVVEAKKLFDGMP 205
+G V A K+FD MP
Sbjct: 153 SGQVDNAAKMFDKMP 167
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 65/140 (46%)
Query: 65 STTVFSRVLSPTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSA 124
+ +F ++ W +I + Y L F M+ +G PD + AC+
Sbjct: 159 AAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACTN 218
Query: 125 MCRGLEGKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAM 184
+ G VH L + +V V SLID+Y +CG + AR+VF M R VVSW ++
Sbjct: 219 LGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSV 278
Query: 185 VVGYVAAGDVVEAKKLFDGM 204
+VG+ A G+ E+ F M
Sbjct: 279 IVGFAANGNAHESLVYFRKM 298
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 69/137 (50%)
Query: 68 VFSRVLSPTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCR 127
VF W T+I + +N L F M +G D + Y V+ ACS +
Sbjct: 293 VFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLAL 352
Query: 128 GLEGKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVG 187
GK +HG + CG + +VG +L+++Y KCG+I +A + F ++ +++VSW M+
Sbjct: 353 LGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFA 412
Query: 188 YVAAGDVVEAKKLFDGM 204
+ G +A KL+D M
Sbjct: 413 FGVHGLADQALKLYDNM 429
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 79/160 (49%), Gaps = 3/160 (1%)
Query: 48 LISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQNSYFPATLSAFARMKANG 107
L S SLA S IA + VF + T WNT++ S+ + ++ F +++ +
Sbjct: 7 LTSKIASLAKS-GRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSD 65
Query: 108 SVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDAR 167
+ PD Y++ ++ C+++ G+ + +R G + V SLIDMYGKC + A
Sbjct: 66 AKPDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSAN 125
Query: 168 KVFDRM--SGRNVVSWTAMVVGYVAAGDVVEAKKLFDGMP 205
KVF M RN V+W +++ Y+ A A +F MP
Sbjct: 126 KVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMP 165
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 66/169 (39%), Gaps = 32/169 (18%)
Query: 68 VFSRVLSPTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCR 127
VF + F WN +I H + LS F M + PD YT+ ++ ACSA
Sbjct: 160 VFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEMLESEFKPDCYTFSSLMNACSADSS 219
Query: 128 G-LEGKSVHGSALRCGLEEDVFVGTSLIDMYGK--------------------------- 159
+ G+ VH L+ G V S++ Y K
Sbjct: 220 NVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIID 279
Query: 160 -CGEIGDARK---VFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
C +IG+ K VF +N+V+WT M+ GY GD +A + F M
Sbjct: 280 ACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEM 328
Score = 47.4 bits (111), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 64/144 (44%), Gaps = 5/144 (3%)
Query: 29 HLQQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHC 88
H + IH C+I G + ++ + ++L I + F + + WNT++ +
Sbjct: 355 HGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFG 414
Query: 89 QNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSAL---RCGLEE 145
+ L + M A+G PD T+ ++ CS EG + S + R LE
Sbjct: 415 VHGLADQALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEV 474
Query: 146 DVFVGTSLIDMYGKCGEIGDARKV 169
D T +IDM+G+ G + +A+ +
Sbjct: 475 DHV--TCMIDMFGRGGHLAEAKDL 496
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 88/173 (50%), Gaps = 1/173 (0%)
Query: 33 IHACIIQRGLEQ-DQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQNS 91
IH +I+RGL+ D ++S + ++ ++ +F + WN ++ + ++
Sbjct: 9 IHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNLRSG 68
Query: 92 YFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVGT 151
+ + F M+ +G+ T +++ CS EG+ +HG LR GLE +V +
Sbjct: 69 NWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCN 128
Query: 152 SLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
SLI MY + G++ +RKVF+ M RN+ SW +++ Y G V +A L D M
Sbjct: 129 SLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEM 181
Score = 80.1 bits (196), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 98/230 (42%), Gaps = 43/230 (18%)
Query: 20 LLKACKRTEHL---QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRV---- 72
LL+ C E +QIH +++ GLE + + ++ I + + S VF+ +
Sbjct: 95 LLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRN 154
Query: 73 -------------------------------LSPTTFLWNTLIKSHCQNSYFPATLSAFA 101
L P WN+L+ + ++
Sbjct: 155 LSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLK 214
Query: 102 RMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVGTSLIDMYGKCG 161
RM+ G P T + +++A + GK++HG LR L DV+V T+LIDMY K G
Sbjct: 215 RMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTG 274
Query: 162 EIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLF-----DGMPP 206
+ AR VFD M +N+V+W ++V G A + +A+ L +G+ P
Sbjct: 275 YLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKP 324
Score = 74.3 bits (181), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 65/139 (46%), Gaps = 5/139 (3%)
Query: 73 LSPTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGK 132
++P W + +N F L F +M+ G P+ T ++K + GK
Sbjct: 357 VAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGK 416
Query: 133 SVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAG 192
VHG LR L D +V T+L+DMYGK G++ A ++F + +++ SW M++GY G
Sbjct: 417 EVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFG 476
Query: 193 DVVEAKKLFD-----GMPP 206
E F GM P
Sbjct: 477 RGEEGIAAFSVMLEAGMEP 495
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 91/188 (48%), Gaps = 3/188 (1%)
Query: 20 LLKAC---KRTEHLQQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPT 76
L+KAC K + + + + G++ ++F+ S+ I I + +F RVL
Sbjct: 144 LVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKD 203
Query: 77 TFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHG 136
+WN ++ + + + + F+ M+ + P+ T+ V+ C++ G +HG
Sbjct: 204 CVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHG 263
Query: 137 SALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVE 196
+ G++ + + SL+ MY KCG DA K+F MS + V+W M+ GYV +G + E
Sbjct: 264 LVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEE 323
Query: 197 AKKLFDGM 204
+ F M
Sbjct: 324 SLTFFYEM 331
Score = 80.5 bits (197), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 83/174 (47%)
Query: 31 QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQN 90
+++H II++G + + I + + + +F R+ WN++I Q+
Sbjct: 461 RELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQS 520
Query: 91 SYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVG 150
A + F +M +G D + + AC+ + GK++HG ++ L DV+
Sbjct: 521 DNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSE 580
Query: 151 TSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
++LIDMY KCG + A VF M +N+VSW +++ G + ++ LF M
Sbjct: 581 STLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEM 634
Score = 80.5 bits (197), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 91/190 (47%), Gaps = 3/190 (1%)
Query: 18 ATLLKACKRTEHLQ---QIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLS 74
++LL + + E+L+ QIH I++ + D FL S I ++ + +FS+ S
Sbjct: 344 SSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNS 403
Query: 75 PTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSV 134
++ +I + N + +L F + P+ T ++ + G+ +
Sbjct: 404 VDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGREL 463
Query: 135 HGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDV 194
HG ++ G + +G ++IDMY KCG + A ++F+R+S R++VSW +M+ + +
Sbjct: 464 HGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNP 523
Query: 195 VEAKKLFDGM 204
A +F M
Sbjct: 524 SAAIDIFRQM 533
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 88/170 (51%)
Query: 32 QIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQNS 91
Q+H ++ G++ + + ++ +S+ ++ +F + T WN +I + Q+
Sbjct: 260 QLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSG 319
Query: 92 YFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVGT 151
+L+ F M ++G +PD T+ ++ + S K +H +R + D+F+ +
Sbjct: 320 LMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTS 379
Query: 152 SLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLF 201
+LID Y KC + A+ +F + + +VV +TAM+ GY+ G +++ ++F
Sbjct: 380 ALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMF 429
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 95/194 (48%), Gaps = 9/194 (4%)
Query: 18 ATLLKACKRTEHL---QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLS 74
+ LL+AC L +Q+HA +I + D + + + + + +F R+
Sbjct: 39 SLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDL 98
Query: 75 PTTFL--WNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAM--CRGLE 130
+ + WN++I S +N L+ + +M G PD T+P ++KAC A+ +G++
Sbjct: 99 RRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGID 158
Query: 131 GKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVA 190
S S+L G++ + FV +SLI Y + G+I K+FDR+ ++ V W M+ GY
Sbjct: 159 FLSDTVSSL--GMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAK 216
Query: 191 AGDVVEAKKLFDGM 204
G + K F M
Sbjct: 217 CGALDSVIKGFSVM 230
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 87/174 (50%), Gaps = 2/174 (1%)
Query: 33 IHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQNSY 92
+H I+ GL D L + ++L ++ + VF+ + WNT++ N +
Sbjct: 210 LHCLAIETGLVGDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGH 269
Query: 93 FPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGL--EEDVFVG 150
+L F M +G DT T+ VI ACS++ G+S+HG ++ G E V VG
Sbjct: 270 PRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVG 329
Query: 151 TSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
S+I MY KCG+ A VF+ + R+V+S A++ G+ A G EA + + M
Sbjct: 330 NSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQM 383
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 84/189 (44%), Gaps = 7/189 (3%)
Query: 20 LLKACKRTEHL---QQIHACIIQRGLEQDQFLI--SNFISLAHSLSTIAYSTTVFSRVLS 74
++ AC E L + +H +I+ G + + ++ IS+ + TVF ++
Sbjct: 295 VISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEELVC 354
Query: 75 PTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSV-PDTYTYPLVIKACSAMCRGLEGKS 133
N ++ N F +M++ + PD T + C + EG++
Sbjct: 355 RDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRA 414
Query: 134 VHGSALRCGLEEDVF-VGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAG 192
VHG +R ++ V S+IDMYGKCG A +F + R++VSW +M+ + G
Sbjct: 415 VHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNG 474
Query: 193 DVVEAKKLF 201
+AK LF
Sbjct: 475 FTHKAKNLF 483
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 73/169 (43%), Gaps = 5/169 (2%)
Query: 34 HACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQNSYF 93
H I+ E D L + I++ I + VF + P WN +I + QN
Sbjct: 604 HGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKAG 663
Query: 94 PATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVGTSL 153
F +K P+ T+ ++ A + + G H +R G + + FV +L
Sbjct: 664 REVFQLFRNLKLE---PNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSAAL 720
Query: 154 IDMYGKCGEIGDARKVFDRMSGRNVVS-WTAMVVGYVAAGDVVEAKKLF 201
+DMY CG + KVF R SG N +S W +++ + G +A +LF
Sbjct: 721 VDMYSSCGMLETGMKVF-RNSGVNSISAWNSVISAHGFHGMGEKAMELF 768
Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 81/179 (45%)
Query: 26 RTEHLQQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIK 85
TE + +H ++ GL QD S ++ + S+ +F + +WN++I
Sbjct: 102 ETETPRSVHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMIT 161
Query: 86 SHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEE 145
+ QN + A + F M G+ D+ T L A S++ + +H A+ GL
Sbjct: 162 ALNQNGRYIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVG 221
Query: 146 DVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
D + +L+++Y K + A VF M R++VSW ++ +A G ++ + F M
Sbjct: 222 DSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSM 280
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 53/107 (49%), Gaps = 1/107 (0%)
Query: 80 WNTLIKSHCQNSYFPATLSAFARMKANGSVP-DTYTYPLVIKACSAMCRGLEGKSVHGSA 138
WN++I + + +L AF M G + D T I A + L+G+ HG A
Sbjct: 548 WNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRCFHGLA 607
Query: 139 LRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMV 185
++ E D + +LI MYG+C +I A KVF +S N+ SW ++
Sbjct: 608 IKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVI 654
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 88/176 (50%), Gaps = 3/176 (1%)
Query: 31 QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVF--SRVLSPTTFLWNTLIKSHC 88
+Q HA +I++G+ Q + + S I + I S +F S WN++I +
Sbjct: 439 KQTHAFLIRQGI-QFEGMNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYT 497
Query: 89 QNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVF 148
QN + T F +M P+ T ++ ACS + GK +HG ++R L+++VF
Sbjct: 498 QNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVF 557
Query: 149 VGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
V ++L+DMY K G I A +F + RN V++T M++GY G A LF M
Sbjct: 558 VASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSM 613
Score = 80.9 bits (198), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 68/145 (46%), Gaps = 8/145 (5%)
Query: 68 VFSRVLSPTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVP--DTYTYPLVIKACSAM 125
+F + PTT LWNT+I N+ L ++RMK D YTY +KAC+
Sbjct: 61 LFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSSTLKACAET 120
Query: 126 CRGLEGKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGD------ARKVFDRMSGRNVV 179
GK+VH +RC V SL++MY C D RKVFD M +NVV
Sbjct: 121 KNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFDNMRRKNVV 180
Query: 180 SWTAMVVGYVAAGDVVEAKKLFDGM 204
+W ++ YV G EA + F M
Sbjct: 181 AWNTLISWYVKTGRNAEACRQFGIM 205
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 5/152 (3%)
Query: 44 QDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQNSYFPATLSAFARM 103
+D F++S+ IS+ L I S VF + +WNT+I + QN ++ F +
Sbjct: 249 KDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELF--L 306
Query: 104 KANGS---VPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVGTSLIDMYGKC 160
+A GS V D TY L A SA+ + G+ HG + E + + SL+ MY +C
Sbjct: 307 EAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRC 366
Query: 161 GEIGDARKVFDRMSGRNVVSWTAMVVGYVAAG 192
G + + VF M R+VVSW M+ +V G
Sbjct: 367 GSVHKSFGVFLSMRERDVVSWNTMISAFVQNG 398
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 91/196 (46%), Gaps = 13/196 (6%)
Query: 18 ATLLKACKRTEHLQQIHA--CIIQRGLEQDQFLISN-----FISLAHSLSTIAYSTT--V 68
++ LKAC T++L+ A C + R L+ ++ N ++S ++ Y V
Sbjct: 111 SSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKV 170
Query: 69 FSRVLSPTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRG 128
F + WNTLI + + F M P ++ V A S + R
Sbjct: 171 FDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVS-ISRS 229
Query: 129 LEGKSV-HGSALRCGLE--EDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMV 185
++ +V +G L+ G E +D+FV +S I MY + G+I +R+VFD RN+ W M+
Sbjct: 230 IKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMI 289
Query: 186 VGYVAAGDVVEAKKLF 201
YV +VE+ +LF
Sbjct: 290 GVYVQNDCLVESIELF 305
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 84/191 (43%), Gaps = 7/191 (3%)
Query: 18 ATLLKACKRTEHLQQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTT 77
A+ + A ++ E +Q H + + E ++++ + + ++ S VF +
Sbjct: 325 ASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDV 384
Query: 78 FLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGS 137
WNT+I + QN L M+ G D T ++ A S + GK H
Sbjct: 385 VSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAF 444
Query: 138 ALRCGLEEDVFVGTS--LIDMYGKCGEIGDARKVFD--RMSGRNVVSWTAMVVGYVAAGD 193
+R G++ F G + LIDMY K G I ++K+F+ + R+ +W +M+ GY G
Sbjct: 445 LIRQGIQ---FEGMNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGH 501
Query: 194 VVEAKKLFDGM 204
+ +F M
Sbjct: 502 TEKTFLVFRKM 512
Score = 50.4 bits (119), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 55/109 (50%), Gaps = 3/109 (2%)
Query: 18 ATLLKACKRTEHL---QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLS 74
A++L AC + + +Q+H I++ L+Q+ F+ S + + I Y+ +FS+
Sbjct: 525 ASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKE 584
Query: 75 PTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACS 123
+ + T+I + Q+ +S F M+ +G PD T+ V+ ACS
Sbjct: 585 RNSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACS 633
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 85.5 bits (210), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 89/175 (50%), Gaps = 6/175 (3%)
Query: 18 ATLLKACKRTEHL--QQIHACIIQRGLEQDQFLI-SNFISLAHSLSTIAYSTTVFSRVLS 74
ATL + +R +++ QQIH ++++G D ++ +++ + + VF
Sbjct: 65 ATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFGGS-E 123
Query: 75 PTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSV 134
F +N LI N + + M+ANG +PD YT+P ++K AM + K V
Sbjct: 124 RDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAMELS-DVKKV 182
Query: 135 HGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGR-NVVSWTAMVVGY 188
HG A + G + D +VG+ L+ Y K + DA+KVFD + R + V W A+V GY
Sbjct: 183 HGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGY 237
Score = 85.1 bits (209), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 77/162 (47%), Gaps = 4/162 (2%)
Query: 31 QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQN 90
+ IH ++ G D + + I + + + ++F + F WN+++ H
Sbjct: 282 RSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYC 341
Query: 91 SYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGL----EED 146
TL+ F RM +G PD T V+ C + +G+ +HG + GL +
Sbjct: 342 GDHDGTLALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSN 401
Query: 147 VFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGY 188
F+ SL+DMY KCG++ DAR VFD M ++ SW M+ GY
Sbjct: 402 EFIHNSLMDMYVKCGDLRDARMVFDSMRVKDSASWNIMINGY 443
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 90/189 (47%), Gaps = 3/189 (1%)
Query: 19 TLLKACKRTE--HLQQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLS-P 75
+LLK E ++++H + G + D ++ S ++ ++ + VF +
Sbjct: 166 SLLKGSDAMELSDVKKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRD 225
Query: 76 TTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVH 135
+ LWN L+ + Q F L F++M+ G +T V+ A + G+S+H
Sbjct: 226 DSVLWNALVNGYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIH 285
Query: 136 GSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVV 195
G A++ G D+ V +LIDMYGK + +A +F+ M R++ +W +++ + GD
Sbjct: 286 GLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHD 345
Query: 196 EAKKLFDGM 204
LF+ M
Sbjct: 346 GTLALFERM 354
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 85.5 bits (210), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 97/189 (51%), Gaps = 4/189 (2%)
Query: 21 LKACKRTEHL---QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTT 77
L+ C R L + +HA I++ G+ Q L + +++ +++ VF +
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDH 69
Query: 78 FLWNTLIKSHCQNSYFPATLSAFARMKANGSV-PDTYTYPLVIKACSAMCRGLEGKSVHG 136
W +++ + Q + TLS F+ + ++ + PD + + ++KAC+ + G+ VH
Sbjct: 70 IAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHC 129
Query: 137 SALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVE 196
+ D V +SL+DMY KCG + A+ VFD + +N +SWTAMV GY +G E
Sbjct: 130 HFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEE 189
Query: 197 AKKLFDGMP 205
A +LF +P
Sbjct: 190 ALELFRILP 198
Score = 84.0 bits (206), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 77/167 (46%), Gaps = 7/167 (4%)
Query: 45 DQFLISNFISLAHSLSTIAYS------TTVFSRVLSPTTFLWNTLIKSHCQNSYFPATLS 98
D + N IS +S A S +F + + W LI Q+ S
Sbjct: 164 DSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFS 223
Query: 99 AFARMKANG-SVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVGTSLIDMY 157
F M+ + D ++ AC+ + + G+ VHG + G + VF+ +LIDMY
Sbjct: 224 VFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMY 283
Query: 158 GKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
KC ++ A+ +F RM R+VVSWT+++VG G +A L+D M
Sbjct: 284 AKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDM 330
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 66/144 (45%), Gaps = 1/144 (0%)
Query: 31 QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQN 90
+Q+H +I G + F+ + I + S + + +FSR+ W +LI Q+
Sbjct: 258 RQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQH 317
Query: 91 SYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALR-CGLEEDVFV 149
L+ + M ++G P+ T+ +I ACS + +G+ + S + G+ +
Sbjct: 318 GQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQH 377
Query: 150 GTSLIDMYGKCGEIGDARKVFDRM 173
T L+D+ G+ G + +A + M
Sbjct: 378 YTCLLDLLGRSGLLDEAENLIHTM 401
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 85.1 bits (209), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 93/194 (47%), Gaps = 14/194 (7%)
Query: 19 TLLKACKRTEHLQQIHACIIQRGLEQDQFLISNFISLAHSLS-TIAYSTTVFSRVLSPTT 77
+LL + L+ + ACII+ GL + ISN + A+S + I + +F R L
Sbjct: 394 SLLATSLDLDVLEMVQACIIKFGL-SSKIEISNALISAYSKNGQIEKADLLFERSLRKNL 452
Query: 78 FLWNTLIKSHCQNSY-------FPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLE 130
WN +I N + F L + R+ +PD YT ++ C + +
Sbjct: 453 ISWNAIISGFYHNGFPFEGLERFSCLLESEVRI-----LPDAYTLSTLLSICVSTSSLML 507
Query: 131 GKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVA 190
G H LR G ++ +G +LI+MY +CG I ++ +VF++MS ++VVSW +++ Y
Sbjct: 508 GSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSR 567
Query: 191 AGDVVEAKKLFDGM 204
G+ A + M
Sbjct: 568 HGEGENAVNTYKTM 581
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 79/171 (46%), Gaps = 3/171 (1%)
Query: 31 QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQN 90
Q+H I+ G E+ + + +++ S + VF + WNT+I S+ Q
Sbjct: 308 HQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQA 367
Query: 91 SYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVG 150
+ +S + RM G PD +T+ ++ A S LE V ++ GL + +
Sbjct: 368 KLGKSAMSVYKRMHIIGVKPDEFTFGSLL-ATSLDLDVLE--MVQACIIKFGLSSKIEIS 424
Query: 151 TSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLF 201
+LI Y K G+I A +F+R +N++SW A++ G+ G E + F
Sbjct: 425 NALISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERF 475
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 87/185 (47%), Gaps = 8/185 (4%)
Query: 18 ATLLKACKRTEHL---QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLS 74
+TLL C T L Q HA +++ G ++ + + I++ TI S VF+++
Sbjct: 493 STLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQMSE 552
Query: 75 PTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSV-PDTYTYPLVIKACSAMCRGLEGKS 133
WN+LI ++ ++ ++ + M+ G V PD T+ V+ ACS EG
Sbjct: 553 KDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAGLVEEGLE 612
Query: 134 VHGSALRC-GLEEDVFVGTSLIDMYGKCGEIGDAR---KVFDRMSGRNVVSWTAMVVGYV 189
+ S + G+ +V + L+D+ G+ G + +A K+ ++ G V W A+
Sbjct: 613 IFNSMVEFHGVIRNVDHFSCLVDLLGRAGHLDEAESLVKISEKTIGSRVDVWWALFSACA 672
Query: 190 AAGDV 194
A GD+
Sbjct: 673 AHGDL 677
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 47/97 (48%)
Query: 110 PDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKV 169
PD Y+ L I + + G VH A+R GL V +L+ +Y + G + +K
Sbjct: 55 PDQYSVSLAITTARHLRDTIFGGQVHCYAIRSGLLCHSHVSNTLLSLYERLGNLASLKKK 114
Query: 170 FDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGMPP 206
FD + +V SWT ++ GD+ A ++FD MP
Sbjct: 115 FDEIDEPDVYSWTTLLSASFKLGDIEYAFEVFDKMPE 151
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 80/180 (44%), Gaps = 12/180 (6%)
Query: 18 ATLLKACK--RTEHLQQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSR---- 71
AT+L C + +Q+H+ +I+ G +++ I++ + + + VF
Sbjct: 194 ATILSMCDYGSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVA 253
Query: 72 VLSPTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEG 131
V TF N +I +L F +M P T+ V+ +CS C + G
Sbjct: 254 VRDQVTF--NVVIDG-LAGFKRDESLLVFRKMLEASLRPTDLTFVSVMGSCS--CAAM-G 307
Query: 132 KSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAA 191
VHG A++ G E+ V + + MY + G A KVF+ + +++V+W M+ Y A
Sbjct: 308 HQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQA 367
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 85.1 bits (209), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 79/158 (50%), Gaps = 4/158 (2%)
Query: 48 LISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQNSYFPATLSAFARMKANG 107
L+ + L H T S +VF + F WN +I ++ + ++ F RM
Sbjct: 72 LVLAYSKLNHLFPT---SLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRMWRES 128
Query: 108 SV-PDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDA 166
V PD +T PL+++ACSA G +H L+ G +FV ++L+ MY G++ A
Sbjct: 129 CVRPDDFTLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHA 188
Query: 167 RKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
RK+FD M R+ V +TAM GYV G+ + +F M
Sbjct: 189 RKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREM 226
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 90/188 (47%), Gaps = 3/188 (1%)
Query: 20 LLKACKRTEHLQQ---IHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPT 76
+L+AC + + IH ++ G F+ S + + + + ++ +F +
Sbjct: 140 ILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDDMPVRD 199
Query: 77 TFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHG 136
+ L+ + + Q L+ F M +G D+ ++ AC + GKSVHG
Sbjct: 200 SVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHGKSVHG 259
Query: 137 SALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVE 196
+R + +G ++ DMY KC + A VF MS R+V+SW+++++GY GDVV
Sbjct: 260 WCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMSRRDVISWSSLILGYGLDGDVVM 319
Query: 197 AKKLFDGM 204
+ KLFD M
Sbjct: 320 SFKLFDEM 327
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 84.7 bits (208), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 75/148 (50%), Gaps = 2/148 (1%)
Query: 58 SLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPL 117
S+ + + F + T WN++I ++ +N + + F RM G PD +T
Sbjct: 355 SVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTS 414
Query: 118 VIKACSAMCRGLEGKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMS-GR 176
++ A + + G +H ++ + DV V +LI MY +CGEI ++R++FD M R
Sbjct: 415 LLSASTGLVNLRLGMQMHQIVVKTVIP-DVPVHNALITMYSRCGEIMESRRIFDEMKLKR 473
Query: 177 NVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
V++W AM+ GY G+ EA LF M
Sbjct: 474 EVITWNAMIGGYAFHGNASEALNLFGSM 501
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 77/178 (43%), Gaps = 21/178 (11%)
Query: 44 QDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQNSYFPATLSAFARM 103
+D F + IS I + +F ++ W+ +I CQN + + F +M
Sbjct: 134 RDSFSWNTMISGYAKNRRIGEALLLFEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKM 193
Query: 104 KANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGS--ALRCGLEEDVFVGTSLIDMYGKCG 161
S P +IK R E V G +L G E+ V+ +LI YG+ G
Sbjct: 194 PVKDSSPLCALVAGLIKN----ERLSEAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRG 249
Query: 162 EIGDARKVFDRMSG---------------RNVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
++ AR +FD++ +NVVSW +M+ Y+ GDVV A+ LFD M
Sbjct: 250 QVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQM 307
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 62/144 (43%), Gaps = 5/144 (3%)
Query: 62 IAYSTTVFSRVLSPTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKA 121
IA + +F ++ + T WNT+I + + F M D T+ +I
Sbjct: 56 IAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKR----DVVTWNTMISG 111
Query: 122 CSAMCRGLEGKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSW 181
+ C G+ D F ++I Y K IG+A +F++M RN VSW
Sbjct: 112 YVS-CGGIRFLEEARKLFDEMPSRDSFSWNTMISGYAKNRRIGEALLLFEKMPERNAVSW 170
Query: 182 TAMVVGYVAAGDVVEAKKLFDGMP 205
+AM+ G+ G+V A LF MP
Sbjct: 171 SAMITGFCQNGEVDSAVVLFRKMP 194
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%)
Query: 135 HGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDV 194
HG R ++V S+I Y K G++ AR +FD+M R+ +SW M+ GYV +
Sbjct: 269 HGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRM 328
Query: 195 VEAKKLFDGMP 205
+A LF MP
Sbjct: 329 EDAFALFSEMP 339
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 32/47 (68%)
Query: 159 KCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGMP 205
+ G I +AR +F+++ RN V+W M+ GYV ++ +A+KLFD MP
Sbjct: 52 RSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMP 98
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 84.3 bits (207), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 87/190 (45%), Gaps = 6/190 (3%)
Query: 21 LKACKRTEHLQ---QIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTT 77
LK C ++ L QIH I G D L++ + L + + VF + T
Sbjct: 120 LKCCIKSGDLLGGLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDT 179
Query: 78 FLWNTLIKSHCQNSYFPATLSAFARMK--ANGSV-PDTYTYPLVIKACSAMCRGLEGKSV 134
WN L + +N L F +MK +G V PD T L ++AC+ + GK V
Sbjct: 180 VSWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQV 239
Query: 135 HGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDV 194
H GL + + +L+ MY +CG + A +VF M RNVVSWTA++ G G
Sbjct: 240 HDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFG 299
Query: 195 VEAKKLFDGM 204
EA + F+ M
Sbjct: 300 KEAIEAFNEM 309
Score = 84.0 bits (206), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 88/180 (48%), Gaps = 4/180 (2%)
Query: 29 HLQQIHACIIQRGLEQDQFLISNFIS-LAHSL--STIAYSTTVFSRVLSPTTFLWNTLIK 85
HL+QIHA +++ L ++ + +F+S LA SL I YS VFS+ L+PT NT+I+
Sbjct: 26 HLRQIHALLLRTSLIRNSDVFHHFLSRLALSLIPRDINYSCRVFSQRLNPTLSHCNTMIR 85
Query: 86 SHCQNSYFPATLSAFARMKANGSVP-DTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLE 144
+ + F ++ N S+P + + +K C L G +HG G
Sbjct: 86 AFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLGGLQIHGKIFSDGFL 145
Query: 145 EDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
D + T+L+D+Y C DA KVFD + R+ VSW + Y+ + LFD M
Sbjct: 146 SDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDVLVLFDKM 205
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 83.6 bits (205), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 59/162 (36%), Positives = 82/162 (50%), Gaps = 11/162 (6%)
Query: 48 LISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQNSYFP-ATLSAFARMKAN 106
LI F+ +S AY VF ++ W TL+ + C FP + F M +
Sbjct: 208 LIDMFVKGENSFEN-AYK--VFDKMSELNVVTW-TLMITRCMQMGFPREAIRFFLDMVLS 263
Query: 107 GSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVGTSLIDMYGKC---GEI 163
G D +T V AC+ + GK +H A+R GL +DV SL+DMY KC G +
Sbjct: 264 GFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDV--ECSLVDMYAKCSADGSV 321
Query: 164 GDARKVFDRMSGRNVVSWTAMVVGYVAAGDV-VEAKKLFDGM 204
D RKVFDRM +V+SWTA++ GY+ ++ EA LF M
Sbjct: 322 DDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEM 363
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 93/196 (47%), Gaps = 10/196 (5%)
Query: 18 ATLLKACKRTEHL---QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFS---R 71
++LLK+C R + +HA +I+ +E D L ++ ISL A + VF R
Sbjct: 66 SSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRR 125
Query: 72 VLSPTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEG 131
W+ ++ + N + F G VP+ Y Y VI+ACS G
Sbjct: 126 FGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVG 185
Query: 132 KSVHGSALRCG-LEEDVFVGTSLIDMYGKCGE--IGDARKVFDRMSGRNVVSWTAMVVGY 188
+ G ++ G E DV VG SLIDM+ K GE +A KVFD+MS NVV+WT M+
Sbjct: 186 RVTLGFLMKTGHFESDVCVGCSLIDMFVK-GENSFENAYKVFDKMSELNVVTWTLMITRC 244
Query: 189 VAAGDVVEAKKLFDGM 204
+ G EA + F M
Sbjct: 245 MQMGFPREAIRFFLDM 260
Score = 74.3 bits (181), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 79/174 (45%)
Query: 31 QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQN 90
+Q+ +RGL + + ++ IS+ + + F + +NT + C+N
Sbjct: 393 KQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRN 452
Query: 91 SYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVG 150
F + + +T+ ++ + + +G+ +H ++ GL + V
Sbjct: 453 LNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVC 512
Query: 151 TSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
+LI MY KCG I A +VF+ M RNV+SWT+M+ G+ G + + F+ M
Sbjct: 513 NALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQM 566
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 90/190 (47%), Gaps = 6/190 (3%)
Query: 18 ATLLKACKRTEHL---QQIHACIIQRGLEQD-QFLISNFISLAHSLSTIAYSTTVFSRVL 73
+++ AC E+L +Q+H+ I+ GL D + + + + + ++ VF R+
Sbjct: 273 SSVFSACAELENLSLGKQLHSWAIRSGLVDDVECSLVDMYAKCSADGSVDDCRKVFDRME 332
Query: 74 SPTTFLWNTLIKSHCQNSYFPA-TLSAFARMKANGSV-PDTYTYPLVIKACSAMCRGLEG 131
+ W LI + +N ++ F+ M G V P+ +T+ KAC + G
Sbjct: 333 DHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVG 392
Query: 132 KSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAA 191
K V G A + GL + V S+I M+ K + DA++ F+ +S +N+VS+ + G
Sbjct: 393 KQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRN 452
Query: 192 GDVVEAKKLF 201
+ +A KL
Sbjct: 453 LNFEQAFKLL 462
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 60/125 (48%), Gaps = 4/125 (3%)
Query: 81 NTLIKSHCQNSYFPATLSAFARMKANGSVP-DTYTYPLVIKACSAMCRGLEGKSVHGSAL 139
+ LI H +SA M +G P D+ T+ ++K+C GK VH +
Sbjct: 30 DRLILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLI 89
Query: 140 RCGLEEDVFVGTSLIDMYGKCGEIGDARKVFD---RMSGRNVVSWTAMVVGYVAAGDVVE 196
+E D + SLI +Y K G+ A VF+ R R+VVSW+AM+ Y G ++
Sbjct: 90 EFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELD 149
Query: 197 AKKLF 201
A K+F
Sbjct: 150 AIKVF 154
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 82.8 bits (203), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 75/163 (46%)
Query: 28 EHLQQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSH 87
+ L IH I G + L I L + ++ +F R+ W +I
Sbjct: 29 KQLLLIHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRF 88
Query: 88 CQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDV 147
+ Y P L F M + +TY V+K+C + EG +HGS + ++
Sbjct: 89 SRCGYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNL 148
Query: 148 FVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVA 190
V ++L+ +Y +CG++ +AR FD M R++VSW AM+ GY A
Sbjct: 149 IVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTA 191
Score = 70.1 bits (170), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 87/184 (47%), Gaps = 10/184 (5%)
Query: 28 EHLQQIHACIIQRGLEQDQFLISNFISLAHSLSTIA-----YSTTVFSRVLSPTTFLWNT 82
E + ++H I+ G + LI + ++ ++A + T +LS T +
Sbjct: 231 EIVSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGF 290
Query: 83 LIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCG 142
+++C + F RMK D ++K C+ + G+ +HG AL+
Sbjct: 291 SQQNNCTSDAFD-IFKDMIRMKTK---MDEVVVSSMLKICTTIASVTIGRQIHGFALKSS 346
Query: 143 -LEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLF 201
+ DV +G SLIDMY K GEI DA F+ M ++V SWT+++ GY G+ +A L+
Sbjct: 347 QIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLY 406
Query: 202 DGMP 205
+ M
Sbjct: 407 NRME 410
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 84/174 (48%), Gaps = 5/174 (2%)
Query: 19 TLLKACKRTEHLQ---QIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSP 75
++LK+CK L+ QIH + + + + S +SL + + F +
Sbjct: 118 SVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKER 177
Query: 76 TTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKS-V 134
WN +I + N+ + S F M G PD +T+ +++A S + + LE S +
Sbjct: 178 DLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRA-SIVVKCLEIVSEL 236
Query: 135 HGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGY 188
HG A++ G + SL++ Y KCG + +A K+ + R+++S TA++ G+
Sbjct: 237 HGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGF 290
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 51/90 (56%)
Query: 115 YPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMS 174
Y +K CS + +HG+++ G ++ + LID+Y K G++ ARK+FDR+S
Sbjct: 15 YLKALKLCSYQNVKKQLLLIHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRIS 74
Query: 175 GRNVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
R+VVSWTAM+ + G +A LF M
Sbjct: 75 KRDVVSWTAMISRFSRCGYHPDALLLFKEM 104
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 88/191 (46%), Gaps = 8/191 (4%)
Query: 20 LLKACKRTEHLQQ---IHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPT 76
L+ A K E +++ IH I+ G + + ++FI+L + + F +
Sbjct: 378 LINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFRE 437
Query: 77 TFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGL---EGKS 133
WN +I QN + L F A ++P+ YT+ V+ A A + +G+
Sbjct: 438 IISWNAMISGFAQNGFSHEALKMFLSAAAE-TMPNEYTFGSVLNAI-AFAEDISVKQGQR 495
Query: 134 VHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGD 193
H L+ GL V ++L+DMY K G I ++ KVF+ MS +N WT+++ Y + GD
Sbjct: 496 CHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGD 555
Query: 194 VVEAKKLFDGM 204
LF M
Sbjct: 556 FETVMNLFHKM 566
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 68/138 (49%), Gaps = 4/138 (2%)
Query: 68 VFSRVLSPTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCR 127
+F ++ P WNT++ N L+ RMK+ G V D +TY + C
Sbjct: 133 IFENLVDPDVVSWNTILSGFDDNQ---IALNFVVRMKSAGVVFDAFTYSTALSFCVGSEG 189
Query: 128 GLEGKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVG 187
L G + + ++ GLE D+ VG S I MY + G AR+VFD MS ++++SW +++ G
Sbjct: 190 FLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSG 249
Query: 188 YVAAGDV-VEAKKLFDGM 204
G EA +F M
Sbjct: 250 LSQEGTFGFEAVVIFRDM 267
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 83/171 (48%), Gaps = 5/171 (2%)
Query: 31 QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQN 90
+QIH I+RG E + + +S + +VF ++ W T+I S+ +
Sbjct: 296 RQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMISSNKDD 355
Query: 91 SYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVG 150
+ +S F M+ +G P+ T+ +I A + EG +HG ++ G + VG
Sbjct: 356 A-----VSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVG 410
Query: 151 TSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLF 201
S I +Y K + DA+K F+ ++ R ++SW AM+ G+ G EA K+F
Sbjct: 411 NSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMF 461
Score = 73.6 bits (179), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 78/176 (44%), Gaps = 1/176 (0%)
Query: 32 QIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQNS 91
Q+ + +++ GLE D + ++FI++ + + VF + WN+L+ Q
Sbjct: 195 QLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEG 254
Query: 92 YFP-ATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVG 150
F + F M G D ++ VI C + +HG ++ G E + VG
Sbjct: 255 TFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVG 314
Query: 151 TSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGMPP 206
L+ Y KCG + + VF +MS RNVVSWT M+ + FDG+ P
Sbjct: 315 NILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMISSNKDDAVSIFLNMRFDGVYP 370
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/146 (21%), Positives = 64/146 (43%), Gaps = 1/146 (0%)
Query: 31 QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQN 90
Q+ HA +++ GL + S + + I S VF+ + F+W ++I ++ +
Sbjct: 494 QRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSH 553
Query: 91 SYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRC-GLEEDVFV 149
F ++ F +M PD T+ V+ AC+ +G + + LE
Sbjct: 554 GDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEH 613
Query: 150 GTSLIDMYGKCGEIGDARKVFDRMSG 175
+ ++DM G+ G + +A ++ + G
Sbjct: 614 YSCMVDMLGRAGRLKEAEELMSEVPG 639
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 66/135 (48%), Gaps = 2/135 (1%)
Query: 70 SRVLSPTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGL 129
S L P + WN+LI Q F RM + VP ++ ACS +
Sbjct: 326 SEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLK 385
Query: 130 EGKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMS--GRNVVSWTAMVVG 187
GK +HG ++ E D+FV TSLIDMY KCG AR++FDR ++ V W M+ G
Sbjct: 386 NGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMISG 445
Query: 188 YVAAGDVVEAKKLFD 202
Y G+ A ++F+
Sbjct: 446 YGKHGECESAIEIFE 460
Score = 77.4 bits (189), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 89/189 (47%), Gaps = 2/189 (1%)
Query: 18 ATLLKACKRTEHLQQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTT 77
A++L C E Q+H ++ G E + ++ ++ +S+ + +F +V +
Sbjct: 136 ASVLGGCGDIEGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSV 195
Query: 78 FLWNTLIKSHCQNSYFPATLSAFARM-KANGSVPDTYTYPLVIKACSAMCRGLEGKSVHG 136
+N I +N S F M K + P+ T+ I AC+++ G+ +HG
Sbjct: 196 VTYNAFISGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHG 255
Query: 137 SALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSG-RNVVSWTAMVVGYVAAGDVV 195
++ + + VGT+LIDMY KC A VF + RN++SW +++ G + G
Sbjct: 256 LVMKKEFQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHE 315
Query: 196 EAKKLFDGM 204
A +LF+ +
Sbjct: 316 TAVELFEKL 324
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 91/188 (48%), Gaps = 6/188 (3%)
Query: 20 LLKACKRTEHLQQ---IHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPT 76
LLK+C + + Q +HA +++ G D F + +S+ + + + V +
Sbjct: 37 LLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKVLDEMPERG 96
Query: 77 TFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHG 136
N + +N + F + +GS ++ T V+ C + G++ +H
Sbjct: 97 IASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGCGDIEGGMQ---LHC 153
Query: 137 SALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVE 196
A++ G E +V+VGTSL+ MY +CGE A ++F+++ ++VV++ A + G + G +
Sbjct: 154 LAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLMENGVMNL 213
Query: 197 AKKLFDGM 204
+F+ M
Sbjct: 214 VPSVFNLM 221
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 53/92 (57%)
Query: 110 PDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKV 169
P+ +T+P ++K+C+ + ++G+ +H ++ G DVF T+L+ MY K ++ DA KV
Sbjct: 29 PNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKV 88
Query: 170 FDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLF 201
D M R + S A V G + G +A ++F
Sbjct: 89 LDEMPERGIASVNAAVSGLLENGFCRDAFRMF 120
Score = 50.8 bits (120), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 77/167 (46%), Gaps = 18/167 (10%)
Query: 19 TLLKACKRTEHLQ---QIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSP 75
+LL AC L+ +IH +I+ E+D F++++ I + +++ +F R P
Sbjct: 373 SLLSACSDIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDR-FEP 431
Query: 76 TT---FLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGK 132
WN +I + ++ + + F ++ P T+ V+ ACS C +E
Sbjct: 432 KPKDPVFWNVMISGYGKHGECESAIEIFELLREEKVEPSLATFTAVLSACSH-CGNVE-- 488
Query: 133 SVHGSALRCGLEEDVFVGTS------LIDMYGKCGEIGDARKVFDRM 173
GS + ++E+ S +ID+ G+ G + +A++V D+M
Sbjct: 489 --KGSQIFRLMQEEYGYKPSTEHIGCMIDLLGRSGRLREAKEVIDQM 533
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 87/171 (50%), Gaps = 4/171 (2%)
Query: 19 TLLKAC----KRTEHLQQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLS 74
++L AC E + +HA I+ G E D+ + ++ I++ ++ S +F+ + +
Sbjct: 451 SVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDN 510
Query: 75 PTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSV 134
WN ++ ++ + + L ++M++ G D +++ + A + + EG+ +
Sbjct: 511 RNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQL 570
Query: 135 HGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMV 185
HG A++ G E D F+ + DMY KCGEIG+ K+ R++ SW ++
Sbjct: 571 HGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILI 621
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 87/188 (46%), Gaps = 4/188 (2%)
Query: 21 LKACKRTEHLQQ---IHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTT 77
L AC + ++ +H ++ GL +Q + + +S+ + ++ S V ++
Sbjct: 352 LAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDV 411
Query: 78 FLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLE-GKSVHG 136
WN LI + ++ L+AF M+ G + T V+ AC LE GK +H
Sbjct: 412 VAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHA 471
Query: 137 SALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVE 196
+ G E D V SLI MY KCG++ ++ +F+ + RN+++W AM+ G E
Sbjct: 472 YIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEE 531
Query: 197 AKKLFDGM 204
KL M
Sbjct: 532 VLKLVSKM 539
Score = 79.3 bits (194), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 87/191 (45%), Gaps = 4/191 (2%)
Query: 18 ATLLKACKRTEHL----QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVL 73
A+L+ AC R+ + Q+H + + GL D ++ + + L ++ S VF +
Sbjct: 45 ASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMP 104
Query: 74 SPTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKS 133
W +L+ + + + M+ G + + LVI +C + G+
Sbjct: 105 DRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQ 164
Query: 134 VHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGD 193
+ G ++ GLE + V SLI M G G + A +FD+MS R+ +SW ++ Y G
Sbjct: 165 IIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGH 224
Query: 194 VVEAKKLFDGM 204
+ E+ ++F M
Sbjct: 225 IEESFRIFSLM 235
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 84/171 (49%)
Query: 31 QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQN 90
+QI +++ GLE + ++ IS+ S+ + Y+ +F ++ T WN++ ++ QN
Sbjct: 163 RQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQN 222
Query: 91 SYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVG 150
+ + F+ M+ ++ T ++ + G+ +HG ++ G + V V
Sbjct: 223 GHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVC 282
Query: 151 TSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLF 201
+L+ MY G +A VF +M ++++SW +++ +V G ++A L
Sbjct: 283 NTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLL 333
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 87/190 (45%), Gaps = 3/190 (1%)
Query: 18 ATLLKACKRTEHLQQ---IHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLS 74
+TLL +H + IH +++ G + + + + + + VF ++ +
Sbjct: 248 STLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPT 307
Query: 75 PTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSV 134
WN+L+ S + L M ++G + T+ + AC +G+ +
Sbjct: 308 KDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRIL 367
Query: 135 HGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDV 194
HG + GL + +G +L+ MYGK GE+ ++R+V +M R+VV+W A++ GY D
Sbjct: 368 HGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDP 427
Query: 195 VEAKKLFDGM 204
+A F M
Sbjct: 428 DKALAAFQTM 437
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/174 (21%), Positives = 73/174 (41%), Gaps = 2/174 (1%)
Query: 28 EHLQQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSH 87
E QQ+H ++ G E D F+ + + I + ++ + WN LI +
Sbjct: 565 EEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISAL 624
Query: 88 CQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALR-CGLEED 146
++ YF + F M G P T+ ++ ACS +G + + R GLE
Sbjct: 625 GRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPA 684
Query: 147 VFVGTSLIDMYGKCGEIGDARKVFDRMSGR-NVVSWTAMVVGYVAAGDVVEAKK 199
+ +ID+ G+ G + +A +M + N + W +++ G++ +K
Sbjct: 685 IEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRK 738
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 87/171 (50%), Gaps = 4/171 (2%)
Query: 19 TLLKAC----KRTEHLQQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLS 74
++L AC E + +HA I+ G E D+ + ++ I++ ++ S +F+ + +
Sbjct: 468 SVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDN 527
Query: 75 PTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSV 134
WN ++ ++ + + L ++M++ G D +++ + A + + EG+ +
Sbjct: 528 RNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQL 587
Query: 135 HGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMV 185
HG A++ G E D F+ + DMY KCGEIG+ K+ R++ SW ++
Sbjct: 588 HGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILI 638
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 87/188 (46%), Gaps = 4/188 (2%)
Query: 21 LKACKRTEHLQQ---IHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTT 77
L AC + ++ +H ++ GL +Q + + +S+ + ++ S V ++
Sbjct: 369 LAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDV 428
Query: 78 FLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLE-GKSVHG 136
WN LI + ++ L+AF M+ G + T V+ AC LE GK +H
Sbjct: 429 VAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHA 488
Query: 137 SALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVE 196
+ G E D V SLI MY KCG++ ++ +F+ + RN+++W AM+ G E
Sbjct: 489 YIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEE 548
Query: 197 AKKLFDGM 204
KL M
Sbjct: 549 VLKLVSKM 556
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 87/191 (45%), Gaps = 4/191 (2%)
Query: 18 ATLLKACKRTEHL----QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVL 73
A+L+ AC R+ + Q+H + + GL D ++ + + L ++ S VF +
Sbjct: 62 ASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMP 121
Query: 74 SPTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKS 133
W +L+ + + + M+ G + + LVI +C + G+
Sbjct: 122 DRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQ 181
Query: 134 VHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGD 193
+ G ++ GLE + V SLI M G G + A +FD+MS R+ +SW ++ Y G
Sbjct: 182 IIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGH 241
Query: 194 VVEAKKLFDGM 204
+ E+ ++F M
Sbjct: 242 IEESFRIFSLM 252
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 85/174 (48%)
Query: 31 QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQN 90
+QI +++ GLE + ++ IS+ S+ + Y+ +F ++ T WN++ ++ QN
Sbjct: 180 RQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQN 239
Query: 91 SYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVG 150
+ + F+ M+ ++ T ++ + G+ +HG ++ G + V V
Sbjct: 240 GHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVC 299
Query: 151 TSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
+L+ MY G +A VF +M ++++SW +++ +V G ++A L M
Sbjct: 300 NTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSM 353
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 87/190 (45%), Gaps = 3/190 (1%)
Query: 18 ATLLKACKRTEHLQQ---IHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLS 74
+TLL +H + IH +++ G + + + + + + VF ++ +
Sbjct: 265 STLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPT 324
Query: 75 PTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSV 134
WN+L+ S + L M ++G + T+ + AC +G+ +
Sbjct: 325 KDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRIL 384
Query: 135 HGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDV 194
HG + GL + +G +L+ MYGK GE+ ++R+V +M R+VV+W A++ GY D
Sbjct: 385 HGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDP 444
Query: 195 VEAKKLFDGM 204
+A F M
Sbjct: 445 DKALAAFQTM 454
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/174 (21%), Positives = 73/174 (41%), Gaps = 2/174 (1%)
Query: 28 EHLQQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSH 87
E QQ+H ++ G E D F+ + + I + ++ + WN LI +
Sbjct: 582 EEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISAL 641
Query: 88 CQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALR-CGLEED 146
++ YF + F M G P T+ ++ ACS +G + + R GLE
Sbjct: 642 GRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPA 701
Query: 147 VFVGTSLIDMYGKCGEIGDARKVFDRMSGR-NVVSWTAMVVGYVAAGDVVEAKK 199
+ +ID+ G+ G + +A +M + N + W +++ G++ +K
Sbjct: 702 IEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRK 755
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 81.3 bits (199), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 82/155 (52%)
Query: 33 IHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQNSY 92
+HA ++ L+ ++ +++ IA + +VF+ + P ++LI + +
Sbjct: 229 VHAFCLKINLDSHSYVGCALVNMYSRCMCIASACSVFNSISEPDLVACSSLITGYSRCGN 288
Query: 93 FPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVGTS 152
L FA ++ +G PD +V+ +C+ + + GK VH +R GLE D+ V ++
Sbjct: 289 HKEALHLFAELRMSGKKPDCVLVAIVLGSCAELSDSVSGKEVHSYVIRLGLELDIKVCSA 348
Query: 153 LIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVG 187
LIDMY KCG + A +F + +N+VS+ ++++G
Sbjct: 349 LIDMYSKCGLLKCAMSLFAGIPEKNIVSFNSLILG 383
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 83/174 (47%)
Query: 31 QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQN 90
Q++H+ + + L +D + + + + +F + FLWN++I+++ +
Sbjct: 25 QKLHSFVTKSKLARDPYFATQLARFYALNDDLISARKLFDVFPERSVFLWNSIIRAYAKA 84
Query: 91 SYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVG 150
F LS F+++ + + PD +TY + + S + +HG A+ GL D G
Sbjct: 85 HQFTTVLSLFSQILRSDTRPDNFTYACLARGFSESFDTKGLRCIHGIAIVSGLGFDQICG 144
Query: 151 TSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
++++ Y K G I +A K+F + ++ W M++GY G + LF+ M
Sbjct: 145 SAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLM 198
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 81/175 (46%)
Query: 27 TEHLQQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKS 86
T+ L+ IH I GL DQ S + I ++ +F + P LWN +I
Sbjct: 122 TKGLRCIHGIAIVSGLGFDQICGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILG 181
Query: 87 HCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEED 146
+ ++ ++ F M+ G P+ YT + L SVH L+ L+
Sbjct: 182 YGCCGFWDKGINLFNLMQHRGHQPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSH 241
Query: 147 VFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLF 201
+VG +L++MY +C I A VF+ +S ++V+ ++++ GY G+ EA LF
Sbjct: 242 SYVGCALVNMYSRCMCIASACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLF 296
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 80.9 bits (198), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 67/130 (51%)
Query: 77 TFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHG 136
T WNTLI + QN Y L M+ NG D +++ V+ S++ GK VH
Sbjct: 225 TISWNTLIAGYAQNGYEEEALKMAVSMEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHA 284
Query: 137 SALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVE 196
L+ G + FV + ++D+Y KCG + A N+ S ++M+VGY + G +VE
Sbjct: 285 RVLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVE 344
Query: 197 AKKLFDGMPP 206
AK+LFD +
Sbjct: 345 AKRLFDSLSE 354
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 58/116 (50%), Gaps = 2/116 (1%)
Query: 94 PATLSAFAR--MKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVGT 151
P ++ AR + + PD+ V+ ACS GK +HG +LR G+ D + T
Sbjct: 373 PDSVLELARAFIANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLVT 432
Query: 152 SLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGMPPG 207
+ +DMY KCG + A ++FD R+ V + AM+ G G ++ + F+ M G
Sbjct: 433 AFVDMYSKCGNVEYAERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTEG 488
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 76/173 (43%), Gaps = 7/173 (4%)
Query: 19 TLLKACKRTEHLQ---QIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSP 75
++L AC +++ +IH ++ G+ D+ L++ F+ + + Y+ +F
Sbjct: 398 SVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKCGNVEYAERIFDSSFER 457
Query: 76 TTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVH 135
T ++N +I + + + F M G PD T+ ++ AC LEG+
Sbjct: 458 DTVMYNAMIAGCAHHGHEAKSFQHFEDMTEGGFKPDEITFMALLSACRHRGLVLEGEKYF 517
Query: 136 GSALRC-GLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVG 187
S + + + T +ID+YGK + K + M G + V A+++G
Sbjct: 518 KSMIEAYNISPETGHYTCMIDLYGKAYRLD---KAIELMEGIDQVEKDAVILG 567
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 34/52 (65%)
Query: 151 TSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFD 202
L+++Y K G + +AR VFD M RNV SW A++ YV +V EA++LF+
Sbjct: 27 NQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAAYVKFNNVKEARELFE 78
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 80.9 bits (198), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 64/125 (51%)
Query: 80 WNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSAL 139
WN +I + +NS L F M G P++ + CS + G+ +H
Sbjct: 252 WNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVS 311
Query: 140 RCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKK 199
+ L DV TSLI MY KCGE+GDA K+F+ M ++VV+W AM+ GY G+ +A
Sbjct: 312 KSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALC 371
Query: 200 LFDGM 204
LF M
Sbjct: 372 LFREM 376
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 76/164 (46%), Gaps = 8/164 (4%)
Query: 43 EQDQ-FLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQNSYFPATLSAFA 101
+QDQ F ++ I+ I + VF + + T WN+L+ ++ P+ +
Sbjct: 57 DQDQIFPLNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKD---PSRMMEAH 113
Query: 102 RMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVGTSLIDMYGKCG 161
++ PDT++Y +++ S R + + R + D ++I Y + G
Sbjct: 114 QLFDEIPEPDTFSYNIML---SCYVRNVNFEKAQSFFDRMPFK-DAASWNTMITGYARRG 169
Query: 162 EIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGMP 205
E+ AR++F M +N VSW AM+ GY+ GD+ +A F P
Sbjct: 170 EMEKARELFYSMMEKNEVSWNAMISGYIECGDLEKASHFFKVAP 213
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 68/153 (44%), Gaps = 8/153 (5%)
Query: 52 FISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPD 111
I ++ S + + +F + P TF +N ++ + +N F S F RM D
Sbjct: 99 LIGISKDPSRMMEAHQLFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRM----PFKD 154
Query: 112 TYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFD 171
++ +I + + + + S + E++ ++I Y +CG++ A F
Sbjct: 155 AASWNTMITGYARRGEMEKARELFYSMM----EKNEVSWNAMISGYIECGDLEKASHFFK 210
Query: 172 RMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
R VV+WTAM+ GY+ A V A+ +F M
Sbjct: 211 VAPVRGVVAWTAMITGYMKAKKVELAEAMFKDM 243
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 80.9 bits (198), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 92/182 (50%), Gaps = 7/182 (3%)
Query: 26 RTEHLQQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIK 85
R + Q+ + +R +I+ FI + + +F R+ W T+I
Sbjct: 248 RIDEADQLFQVMPERDFASWNTMITGFIRNRE----MNKACGLFDRMPEKNVISWTTMIT 303
Query: 86 SHCQNSYFPATLSAFARMKANGSV-PDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLE 144
+ +N L+ F++M +GSV P+ TY ++ ACS + +EG+ +H + +
Sbjct: 304 GYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQ 363
Query: 145 EDVFVGTSLIDMYGKCGEIGDARKVFDR--MSGRNVVSWTAMVVGYVAAGDVVEAKKLFD 202
++ V ++L++MY K GE+ ARK+FD + R+++SW +M+ Y G EA ++++
Sbjct: 364 KNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYN 423
Query: 203 GM 204
M
Sbjct: 424 QM 425
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 67/144 (46%), Gaps = 8/144 (5%)
Query: 62 IAYSTTVFSRVLSPTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKA 121
++ + +F + WNT+I + Q+ L F M V ++ ++KA
Sbjct: 125 LSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPERNIV----SWNSMVKA 180
Query: 122 CSAMCRGLEGKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSW 181
R E ++ R DV T+++D K G++ +AR++FD M RN++SW
Sbjct: 181 LVQRGRIDEAMNLFERMPR----RDVVSWTAMVDGLAKNGKVDEARRLFDCMPERNIISW 236
Query: 182 TAMVVGYVAAGDVVEAKKLFDGMP 205
AM+ GY + EA +LF MP
Sbjct: 237 NAMITGYAQNNRIDEADQLFQVMP 260
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 46/77 (59%), Gaps = 2/77 (2%)
Query: 131 GKSVHGSALRCGL-EEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGR-NVVSWTAMVVGY 188
GK L GL E DV T +I Y K G++ +AR++FDR+ R NVV+WTAMV GY
Sbjct: 60 GKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDSRKNVVTWTAMVSGY 119
Query: 189 VAAGDVVEAKKLFDGMP 205
+ + + A+ LF MP
Sbjct: 120 LRSKQLSIAEMLFQEMP 136
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 36/50 (72%)
Query: 153 LIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFD 202
LI K G+I +ARK+FD + R+VV+WT ++ GY+ GD+ EA++LFD
Sbjct: 52 LIGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFD 101
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 61/147 (41%), Gaps = 14/147 (9%)
Query: 62 IAYSTTVFSRVLSPTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKA 121
I + +F + WN+++K+ Q ++ F RM V +
Sbjct: 156 IDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERMPRRDVV-----------S 204
Query: 122 CSAMCRGLEGKSVHGSALR---CGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNV 178
+AM GL A R C E ++ ++I Y + I +A ++F M R+
Sbjct: 205 WTAMVDGLAKNGKVDEARRLFDCMPERNIISWNAMITGYAQNNRIDEADQLFQVMPERDF 264
Query: 179 VSWTAMVVGYVAAGDVVEAKKLFDGMP 205
SW M+ G++ ++ +A LFD MP
Sbjct: 265 ASWNTMITGFIRNREMNKACGLFDRMP 291
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 80.5 bits (197), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 68/130 (52%)
Query: 75 PTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSV 134
P W ++I N AF +M +G P++ T ++ AC+ + GK +
Sbjct: 251 PDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEI 310
Query: 135 HGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDV 194
HG ++ GLE+ FV ++L+DMYGKCG I +A +F + + V++ +M+ Y G
Sbjct: 311 HGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKKTTVTFNSMIFCYANHGLA 370
Query: 195 VEAKKLFDGM 204
+A +LFD M
Sbjct: 371 DKAVELFDQM 380
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 64/123 (52%)
Query: 82 TLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRC 141
+I + +N Y+ +L F M +G D + P ++KA + GK +H L+
Sbjct: 87 VMIGACARNGYYQESLDFFREMYKDGLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKF 146
Query: 142 GLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLF 201
E D F+ +SLIDMY K GE+G+ARKVF + +++V + AM+ GY EA L
Sbjct: 147 SYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLV 206
Query: 202 DGM 204
M
Sbjct: 207 KDM 209
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 80.1 bits (196), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 79/167 (47%), Gaps = 6/167 (3%)
Query: 45 DQFLISNFISLAHSLS------TIAYSTTVFSRVLSPTTFLWNTLIKSHCQNSYFPATLS 98
DQ + N S + +S + + VF + WNT++ + Q+ L
Sbjct: 106 DQMHLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALW 165
Query: 99 AFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVGTSLIDMYG 158
+ + +G + +++ ++ AC + + HG L G +V + S+ID Y
Sbjct: 166 FYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYA 225
Query: 159 KCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGMP 205
KCG++ A++ FD M+ +++ WT ++ GY GD+ A+KLF MP
Sbjct: 226 KCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMP 272
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 130 EGKSVHGSALRCGLEE-DVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGY 188
+GK +H G + + + LI MY KCG+ DA KVFD+M RN+ SW MV GY
Sbjct: 64 QGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGY 123
Query: 189 VAAGDVVEAKKLFDGMP 205
V +G +V A+ +FD MP
Sbjct: 124 VKSGMLVRARVVFDSMP 140
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 70/162 (43%), Gaps = 1/162 (0%)
Query: 44 QDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQNSYFPATLSAFARM 103
+D + + IS L + + +F + W LI + + L F +M
Sbjct: 243 KDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKM 302
Query: 104 KANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEI 163
A G P+ +T+ + A +++ GK +HG +R + + V +SLIDMY K G +
Sbjct: 303 IALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSL 362
Query: 164 GDARKVFDRMSGR-NVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
+ +VF + + V W M+ G +A ++ D M
Sbjct: 363 EASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDM 404
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 80.1 bits (196), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 74/141 (52%), Gaps = 4/141 (2%)
Query: 68 VFSRVLSPTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCR 127
+ S+ + P T ++N LI+++C++ L MK G P++ TY +IK S + R
Sbjct: 636 MMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISR 695
Query: 128 GLEGKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNV----VSWTA 183
E K + GLE +VF T+LID YGK G++ + M +NV +++T
Sbjct: 696 VEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTV 755
Query: 184 MVVGYVAAGDVVEAKKLFDGM 204
M+ GY G+V EA +L + M
Sbjct: 756 MIGGYARDGNVTEASRLLNEM 776
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 61/138 (44%), Gaps = 4/138 (2%)
Query: 71 RVLSPTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLE 130
R L P + ++ LI + + + K NG +PD YTY ++I C R E
Sbjct: 569 RGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEE 628
Query: 131 GKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGR----NVVSWTAMVV 186
G+ + ++ + V LI Y + G + A ++ + M + N ++T+++
Sbjct: 629 GQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIK 688
Query: 187 GYVAAGDVVEAKKLFDGM 204
G V EAK LF+ M
Sbjct: 689 GMSIISRVEEAKLLFEEM 706
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 80.1 bits (196), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 74/141 (52%), Gaps = 4/141 (2%)
Query: 68 VFSRVLSPTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCR 127
+ S+ + P T ++N LI+++C++ L MK G P++ TY +IK S + R
Sbjct: 636 MMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISR 695
Query: 128 GLEGKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNV----VSWTA 183
E K + GLE +VF T+LID YGK G++ + M +NV +++T
Sbjct: 696 VEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTV 755
Query: 184 MVVGYVAAGDVVEAKKLFDGM 204
M+ GY G+V EA +L + M
Sbjct: 756 MIGGYARDGNVTEASRLLNEM 776
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 61/138 (44%), Gaps = 4/138 (2%)
Query: 71 RVLSPTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLE 130
R L P + ++ LI + + + K NG +PD YTY ++I C R E
Sbjct: 569 RGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEE 628
Query: 131 GKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGR----NVVSWTAMVV 186
G+ + ++ + V LI Y + G + A ++ + M + N ++T+++
Sbjct: 629 GQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIK 688
Query: 187 GYVAAGDVVEAKKLFDGM 204
G V EAK LF+ M
Sbjct: 689 GMSIISRVEEAKLLFEEM 706
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 88/190 (46%), Gaps = 10/190 (5%)
Query: 21 LKACKR---TEHLQQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTT 77
LKAC R + + Q+H I +RGL D L + + + + +F +
Sbjct: 116 LKACARALCSSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDV 175
Query: 78 FLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSV-HG 136
WN LI + + + RM+ G T + ACS + EG+++ HG
Sbjct: 176 ASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGENIFHG 235
Query: 137 SALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSG-RNVVSWTAMVVGYVAAGDVV 195
+ ++V V + IDMY KCG + A +VF++ +G ++VV+W M+ G+ G+
Sbjct: 236 YS-----NDNVIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAH 290
Query: 196 EAKKLFDGMP 205
A ++FD +
Sbjct: 291 RALEIFDKLE 300
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 89/196 (45%), Gaps = 10/196 (5%)
Query: 19 TLLKACKRTEHLQQIHACIIQRGLEQDQFLISNFISLA--HSLSTIAYSTTVFSRVLSPT 76
T+++ C ++Q+ + + G Q FL S + ++++ +F + P
Sbjct: 8 TMIQKCVSFSQIKQLQSHFLTAGHFQSSFLRSRLLERCAISPFGDLSFAVQIFRYIPKPL 67
Query: 77 TFLWNTLIKSHCQNSYFPATLSAFARMKANGSVP------DTYTYPLVIKACS-AMCRGL 129
T WN +I+ +S+ S + M S D T +KAC+ A+C
Sbjct: 68 TNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKACARALCSSA 127
Query: 130 EGKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYV 189
+ +H R GL D + T+L+D Y K G++ A K+FD M R+V SW A++ G V
Sbjct: 128 MDQ-LHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLV 186
Query: 190 AAGDVVEAKKLFDGMP 205
+ EA +L+ M
Sbjct: 187 SGNRASEAMELYKRME 202
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 94/192 (48%), Gaps = 12/192 (6%)
Query: 18 ATLLKACKRTEHLQQ---IHACIIQRGLEQDQFLI-SNFISLAHSLSTIAYSTTVFSRV- 72
++++K C + LQQ +HA ++ G +D ++ + IS S+ I + V++ +
Sbjct: 189 SSVVKTCASLKILQQGKQVHAMVVVTG--RDLVVLGTAMISFYSSVGLINEAMKVYNSLN 246
Query: 73 LSPTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGK 132
+ + N+LI +N + +R + P+ + CS GK
Sbjct: 247 VHTDEVMLNSLISGCIRNRNYKEAFLLMSRQR-----PNVRVLSSSLAGCSDNSDLWIGK 301
Query: 133 SVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAG 192
+H ALR G D + L+DMYGKCG+I AR +F + ++VVSWT+M+ Y G
Sbjct: 302 QIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNG 361
Query: 193 DVVEAKKLFDGM 204
D V+A ++F M
Sbjct: 362 DGVKALEIFREM 373
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 59/109 (54%)
Query: 96 TLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVGTSLID 155
TL+ F ++ ++T+ V+ ACS + G+ VH ++ G E T+LID
Sbjct: 68 TLALFLQIHRASPDLSSHTFTPVLGACSLLSYPETGRQVHALMIKQGAETGTISKTALID 127
Query: 156 MYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
MY K G + D+ +VF+ + +++VSW A++ G++ G EA +F M
Sbjct: 128 MYSKYGHLVDSVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAM 176
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 64/144 (44%), Gaps = 1/144 (0%)
Query: 31 QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQN 90
+Q+HA +I++G E + I + + S VF V WN L+ +N
Sbjct: 104 RQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNALLSGFLRN 163
Query: 91 SYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVG 150
L FA M +T V+K C+++ +GK VH + G + V +G
Sbjct: 164 GKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVHAMVVVTG-RDLVVLG 222
Query: 151 TSLIDMYGKCGEIGDARKVFDRMS 174
T++I Y G I +A KV++ ++
Sbjct: 223 TAMISFYSSVGLINEAMKVYNSLN 246
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 65/150 (43%), Gaps = 11/150 (7%)
Query: 31 QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQN 90
+QIH ++ G D L + + + I + T+F + S + W ++I ++ N
Sbjct: 301 KQIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVN 360
Query: 91 SYFPATLSAFARM--KANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSA-----LRCGL 143
L F M + +G +P++ T+ +VI AC+ EGK G L G
Sbjct: 361 GDGVKALEIFREMCEEGSGVLPNSVTFLVVISACAHAGLVKEGKECFGMMKEKYRLVPGT 420
Query: 144 EEDVFVGTSLIDMYGKCGEIGDARKVFDRM 173
E V ID+ K GE + ++ +RM
Sbjct: 421 EHYV----CFIDILSKAGETEEIWRLVERM 446
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 81/174 (46%), Gaps = 1/174 (0%)
Query: 32 QIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQNS 91
Q+H +I G + F+ S + L L + + +F +L + N L++ CQ
Sbjct: 133 QVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEMLDRNLAVCNLLLRCFCQTG 192
Query: 92 YFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLE-EDVFVG 150
+ RM+ G + TY +I+ CS EGK +H ++ G ++FV
Sbjct: 193 ESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKSGWNISNIFVA 252
Query: 151 TSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
L+D Y CG++ + + F+ + ++V+SW ++V G V+++ LF M
Sbjct: 253 NVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVLDSLDLFSKM 306
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 84/195 (43%), Gaps = 9/195 (4%)
Query: 19 TLLKACKRTEHLQ---QIHACIIQRGLEQDQFLI-SNFISLAHSLSTIAYSTTVFSRVLS 74
+ L C R +Q QIH +++ G + + S I + + I S ++ +
Sbjct: 320 SFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSALIDMYGKCNGIENSALLYQSLPC 379
Query: 75 PTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACS-AMCRGLEGKS 133
N+L+ S + F M G+ D T V+KA S ++ L +
Sbjct: 380 LNLECCNSLMTSLMHCGITKDIIEMFGLMIDEGTGIDEVTLSTVLKALSLSLPESLHSCT 439
Query: 134 -VHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAG 192
VH A++ G DV V SLID Y K G+ +RKVFD + N+ T+++ GY G
Sbjct: 440 LVHCCAIKSGYAADVAVSCSLIDAYTKSGQNEVSRKVFDELDTPNIFCLTSIINGYARNG 499
Query: 193 ---DVVEAKKLFDGM 204
D V+ + D M
Sbjct: 500 MGTDCVKMLREMDRM 514
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/171 (20%), Positives = 75/171 (43%), Gaps = 5/171 (2%)
Query: 31 QQIHACIIQRGLEQDQFLISN-FISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQ 89
+Q+H+ +++ G ++N + + ++ S F+ V WN+++
Sbjct: 233 KQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCAD 292
Query: 90 NSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLE-EDVF 148
+L F++M+ G P + + CS GK +H L+ G + +
Sbjct: 293 YGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLH 352
Query: 149 VGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAG---DVVE 196
V ++LIDMYGKC I ++ ++ + N+ +++ + G D++E
Sbjct: 353 VQSALIDMYGKCNGIENSALLYQSLPCLNLECCNSLMTSLMHCGITKDIIE 403
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 77.8 bits (190), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 76/160 (47%), Gaps = 4/160 (2%)
Query: 49 ISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQNSYFPATLSAFARMKANGS 108
I+N IS + ++F + + WN +I Q ++ F M G
Sbjct: 162 ITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGV 221
Query: 109 V-PDTYTYPLVIKACSAMCRGLEGKSVHGSALR-CGLEEDVFVGTSLIDMYGKCGEIGDA 166
V P+ T+P I A S + GKS+H A++ G +VFV SLI Y KCG + D+
Sbjct: 222 VIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDS 281
Query: 167 RKVFDRM--SGRNVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
F+++ RN+VSW +M+ GY G EA +F+ M
Sbjct: 282 LLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKM 321
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 61/108 (56%), Gaps = 2/108 (1%)
Query: 99 AFARMKANGSVPDTYTYPLVIKACSAMCRGLE-GKSVHGSALRCGLEEDVFVGTSLIDMY 157
AF R+ G P+ +T+ VI S R ++ GK +H AL+ GL +VFVG+++++ Y
Sbjct: 80 AFKRLLCLGIRPNEFTFGTVI-GSSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCY 138
Query: 158 GKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGMP 205
K + DAR+ FD NVVS T ++ GY+ + EA LF MP
Sbjct: 139 VKLSTLTDARRCFDDTRDPNVVSITNLISGYLKKHEFEEALSLFRAMP 186
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 77.8 bits (190), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 94/197 (47%), Gaps = 12/197 (6%)
Query: 18 ATLLKACKR---TEHLQQIHACIIQRGLEQDQFLISNFISLAHSLSTI---AYSTTVFSR 71
A +L C R + + + +H+ II+ GLE+D + + +S+ I AY T F
Sbjct: 126 AIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAY--TAFDG 183
Query: 72 VLSPTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGL-- 129
+ WN +I +N+ +F M + P+ T V+ C++M + +
Sbjct: 184 IADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIAC 243
Query: 130 -EGKSVHGSAL-RCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVG 187
G+ +H + R L+ VFV SL+ Y + G I +A +F RM +++VSW ++ G
Sbjct: 244 RSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAG 303
Query: 188 YVAAGDVVEAKKLFDGM 204
Y + + +A +LF +
Sbjct: 304 YASNCEWFKAFQLFHNL 320
Score = 74.3 bits (181), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 79/161 (49%), Gaps = 3/161 (1%)
Query: 31 QQIHACIIQRG-LEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQ 89
+QIH+ ++QR L+ F+ ++ +S + I + ++F+R+ S WN +I +
Sbjct: 247 RQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYAS 306
Query: 90 NSYFPATLSAFARMKANGSV-PDTYTYPLVIKACSAMCRGLEGKSVHGSALRCG-LEEDV 147
N + F + G V PD+ T ++ C+ + GK +H LR L ED
Sbjct: 307 NCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDT 366
Query: 148 FVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGY 188
VG +LI Y + G+ A F MS ++++SW A++ +
Sbjct: 367 SVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAF 407
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 90/187 (48%), Gaps = 6/187 (3%)
Query: 20 LLKACKRTEHL---QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPT 76
++KAC L + +H C+ + G + + +++ + +F ++ S
Sbjct: 27 VVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDDCQKMFRQMDSLD 86
Query: 77 TFLWNTLIKSHCQNSYFPATLSAFARMK-ANGSVPDTYTYPLVIKACSAMCRGLEGKSVH 135
+WN ++ + S T+ F M A+ P + T+ +V+ C + GKS+H
Sbjct: 87 PVVWN-IVLTGLSVSCGRETMRFFKAMHFADEPKPSSVTFAIVLPLCVRLGDSYNGKSMH 145
Query: 136 GSALRCGLEEDVFVGTSLIDMYGKCGEI-GDARKVFDRMSGRNVVSWTAMVVGYVAAGDV 194
++ GLE+D VG +L+ MY K G I DA FD ++ ++VVSW A++ G+ +
Sbjct: 146 SYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAGFSENNMM 205
Query: 195 VEAKKLF 201
+A + F
Sbjct: 206 ADAFRSF 212
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 93/187 (49%), Gaps = 5/187 (2%)
Query: 20 LLKACKRTEHLQQIHACIIQRGLEQDQFLISNFISLAHSLSTIAY--STTVFSRVLSPTT 77
LL A + +++ H + GL + + L+S L+ +++ ++ + +F+ + +
Sbjct: 476 LLDAYAKCGNVEYAHKIFL--GLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDL 533
Query: 78 FLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGS 137
W+ +++ + ++ + F ++A G P+T T ++ C+ + + HG
Sbjct: 534 TTWSLMVRIYAESCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGY 593
Query: 138 ALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEA 197
+R GL D+ + +L+D+Y KCG + A VF + R++V +TAMV GY G EA
Sbjct: 594 IIRGGLG-DIRLKGTLLDVYAKCGSLKHAYSVFQSDARRDLVMFTAMVAGYAVHGRGKEA 652
Query: 198 KKLFDGM 204
++ M
Sbjct: 653 LMIYSHM 659
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 93/194 (47%), Gaps = 8/194 (4%)
Query: 19 TLLKACKRTEHL---QQIHACIIQRG-LEQDQFLISNFISLAHSLSTIAYSTTVFSRVLS 74
++L C + L ++IH+ I++ L +D + + IS + + FS + +
Sbjct: 335 SILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMST 394
Query: 75 PTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSV 134
WN ++ + + L+ + D+ T ++K C + + K V
Sbjct: 395 KDIISWNAILDAFADSPKQFQFLNLLHHLLNEAITLDSVTILSLLKFCINVQGIGKVKEV 454
Query: 135 HGSALRCGL---EEDVFVGTSLIDMYGKCGEIGDARKVFDRMSG-RNVVSWTAMVVGYVA 190
HG +++ GL EE+ +G +L+D Y KCG + A K+F +S R +VS+ +++ GYV
Sbjct: 455 HGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVN 514
Query: 191 AGDVVEAKKLFDGM 204
+G +A+ LF M
Sbjct: 515 SGSHDDAQMLFTEM 528
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 77.8 bits (190), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 83/172 (48%)
Query: 33 IHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQNSY 92
IH +++ G+ ++ +++ FI+ + S +F + WNT+I H QN
Sbjct: 156 IHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGL 215
Query: 93 FPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVGTS 152
L+ F + G PD T+ V+++C M + +HG + G + + T+
Sbjct: 216 AEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTA 275
Query: 153 LIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
L+D+Y K G + D+ VF ++ + ++WTAM+ Y G +A K F+ M
Sbjct: 276 LLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELM 327
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 87/179 (48%), Gaps = 12/179 (6%)
Query: 21 LKACKRTEHLQQIHACIIQ-----RGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSP 75
+K+C E + +H +++ G DQ L+ ++ L H + + +F +
Sbjct: 41 VKSCVSIELCRLLHCKVVKSVSYRHGFIGDQ-LVGCYLRLGHDVC----AEKLFDEMPER 95
Query: 76 TTFLWNTLIKSHCQNSYFPATLSAFARMKAN--GSVPDTYTYPLVIKACSAMCRGLEGKS 133
WN+LI + Y +RM + G P+ T+ +I AC EG+
Sbjct: 96 DLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEGRC 155
Query: 134 VHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAG 192
+HG ++ G+ E+V V + I+ YGK G++ + K+F+ +S +N+VSW M+V ++ G
Sbjct: 156 IHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNG 214
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 65/144 (45%), Gaps = 1/144 (0%)
Query: 31 QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQN 90
Q IH I+ G ++ + + + L L + S+TVF + SP + W ++ ++ +
Sbjct: 255 QGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATH 314
Query: 91 SYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGS-ALRCGLEEDVFV 149
+ + F M G PD T+ ++ ACS EGK + + R ++ +
Sbjct: 315 GFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDH 374
Query: 150 GTSLIDMYGKCGEIGDARKVFDRM 173
+ ++D+ G+ G + DA + M
Sbjct: 375 YSCMVDLLGRSGLLQDAYGLIKEM 398
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 77.4 bits (189), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 71/143 (49%)
Query: 62 IAYSTTVFSRVLSPTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKA 121
I+ + +F ++ W +I + Q+ + L F +M+ G + ++ +
Sbjct: 359 ISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALST 418
Query: 122 CSAMCRGLEGKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSW 181
C+ + GK +HG ++ G E FVG +L+ MY KCG I +A +F M+G+++VSW
Sbjct: 419 CADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSW 478
Query: 182 TAMVVGYVAAGDVVEAKKLFDGM 204
M+ GY G A + F+ M
Sbjct: 479 NTMIAGYSRHGFGEVALRFFESM 501
Score = 60.5 bits (145), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 73/168 (43%), Gaps = 31/168 (18%)
Query: 65 STTVFSRVLSPTTFLWNTLIKSHCQNSYFPAT------------------LSAFARMKA- 105
+ +VF R+ WN L+ ++ QNS L F + K
Sbjct: 176 ARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKI 235
Query: 106 --------NGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVGTSLIDMY 157
+ +V D ++ +I + + E + + + +DVF T+++ Y
Sbjct: 236 VEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESP----VQDVFTWTAMVSGY 291
Query: 158 GKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGMP 205
+ + +AR++FD+M RN VSW AM+ GYV + AK+LFD MP
Sbjct: 292 IQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMP 339
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 60/147 (40%), Gaps = 22/147 (14%)
Query: 62 IAYSTTVFSRVLSPTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKA 121
I + +F F W ++ + QN F +M V +
Sbjct: 266 IDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEV-----------S 314
Query: 122 CSAMCRGLEGKSVHGSALRCGLE-------EDVFVGTSLIDMYGKCGEIGDARKVFDRMS 174
+AM G V G + E +V ++I Y +CG+I +A+ +FD+M
Sbjct: 315 WNAMLAGY----VQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMP 370
Query: 175 GRNVVSWTAMVVGYVAAGDVVEAKKLF 201
R+ VSW AM+ GY +G EA +LF
Sbjct: 371 KRDPVSWAAMIAGYSQSGHSFEALRLF 397
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 58/131 (44%), Gaps = 10/131 (7%)
Query: 84 IKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGL 143
+K C N++ A + R + + T PL+ S + S + RC
Sbjct: 24 LKRRCNNAHGAANFHSLKR-ATQTQIQKSQTKPLLKCGDSDIKEWNVAISSYMRTGRCNE 82
Query: 144 EEDVFVG---------TSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDV 194
VF +I Y + GE ARK+FD M R++VSW M+ GYV ++
Sbjct: 83 ALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNL 142
Query: 195 VEAKKLFDGMP 205
+A++LF+ MP
Sbjct: 143 GKARELFEIMP 153
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 61/134 (45%), Gaps = 8/134 (5%)
Query: 68 VFSRVLSPTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCR 127
VF R+ ++ +N +I + +N F F M D ++ ++IK R
Sbjct: 86 VFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPER----DLVSWNVMIKG-YVRNR 140
Query: 128 GLEGKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVG 187
L GK+ E DV +++ Y + G + DAR VFDRM +N VSW A++
Sbjct: 141 NL-GKARE--LFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSA 197
Query: 188 YVAAGDVVEAKKLF 201
YV + EA LF
Sbjct: 198 YVQNSKMEEACMLF 211
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 77.4 bits (189), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 82/187 (43%), Gaps = 3/187 (1%)
Query: 21 LKACKRTEHL---QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTT 77
L AC ++ + QQIHA + + G+E + + S + + +I + T+F
Sbjct: 263 LAACSGSQRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDE 322
Query: 78 FLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGS 137
++ QN + F RM G D V+ GK +H
Sbjct: 323 VSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSL 382
Query: 138 ALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEA 197
++ + FV LI+MY KCG++ D++ VF RM RN VSW +M+ + G + A
Sbjct: 383 VIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAA 442
Query: 198 KKLFDGM 204
KL++ M
Sbjct: 443 LKLYEEM 449
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 79/174 (45%)
Query: 31 QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQN 90
+ IHA I G +++ + + I+ VF + +I +N
Sbjct: 175 KMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRGVFDGMSHRNVITLTAVISGLIEN 234
Query: 91 SYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVG 150
L F+ M+ P++ TY + ACS R +EG+ +H + G+E ++ +
Sbjct: 235 ELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIESELCIE 294
Query: 151 TSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
++L+DMY KCG I DA +F+ + + VS T ++VG G EA + F M
Sbjct: 295 SALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRM 348
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 52/108 (48%), Gaps = 1/108 (0%)
Query: 100 FARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVGTSLIDMYGK 159
RM +G D T +V+ C L K +H A+ G ++++ VG LI Y K
Sbjct: 144 LKRMLGSGGF-DHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFK 202
Query: 160 CGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGMPPG 207
CG R VFD MS RNV++ TA++ G + + +LF M G
Sbjct: 203 CGCSVSGRGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRG 250
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 82/189 (43%), Gaps = 22/189 (11%)
Query: 31 QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQN 90
+Q+H+ +I+R + F+ + I++ + S TVF R+ WN++I + ++
Sbjct: 377 KQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARH 436
Query: 91 SYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGL---------EGKSVHGSALRC 141
+ A L + M P T+ ++ ACS + GL E K VH
Sbjct: 437 GHGLAALKLYEEMTTLEVKPTDVTFLSLLHACSHV--GLIDKGRELLNEMKEVH------ 488
Query: 142 GLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGR-NVVSWTAMVVGYVAAGDV----VE 196
G+E T +IDM G+ G + +A+ D + + + W A++ GD
Sbjct: 489 GIEPRTEHYTCIIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQALLGACSFHGDTEVGEYA 548
Query: 197 AKKLFDGMP 205
A++LF P
Sbjct: 549 AEQLFQTAP 557
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 94/224 (41%), Gaps = 37/224 (16%)
Query: 18 ATLLKACKRTEHL---QQIHACIIQRGLEQDQFLISNFISLAH----------------- 57
A++L AC E L +QIH+ I+ G + +++ IS+
Sbjct: 283 ASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGT 342
Query: 58 ----------------SLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQNSYFPATLSAFA 101
L + + +F + W +I + Q+ + ++ F
Sbjct: 343 KDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFR 402
Query: 102 RMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVGTSLIDMYGKCG 161
M G P++YT ++ S++ GK +HGSA++ G V V +LI MY K G
Sbjct: 403 SMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAG 462
Query: 162 EIGDARKVFDRMS-GRNVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
I A + FD + R+ VSWT+M++ G EA +LF+ M
Sbjct: 463 NITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETM 506
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 93/206 (45%), Gaps = 33/206 (16%)
Query: 31 QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQN 90
Q +H +I+ GL +L++N +++ ++ +F + T F WNT++ ++ +
Sbjct: 34 QLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKR 93
Query: 91 SYFPATLSAFARMKANGSV-------------------------------PDTYTYPLVI 119
+T F ++ SV P +T V+
Sbjct: 94 GDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVL 153
Query: 120 KACSAMCRGLE-GKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNV 178
+ +A R +E GK VH ++ GL +V V SL++MY KCG+ A+ VFDRM R++
Sbjct: 154 ASVAA-TRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDI 212
Query: 179 VSWTAMVVGYVAAGDVVEAKKLFDGM 204
SW AM+ ++ G + A F+ M
Sbjct: 213 SSWNAMIALHMQVGQMDLAMAQFEQM 238
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 79/190 (41%), Gaps = 34/190 (17%)
Query: 52 FISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSV-P 110
I+L + + + F ++ WN++I Q Y L F++M + + P
Sbjct: 218 MIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSP 277
Query: 111 DTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVGTSLIDMYGKCG--------- 161
D +T V+ AC+ + + GK +H + G + V +LI MY +CG
Sbjct: 278 DRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLI 337
Query: 162 ---------------------EIGD---ARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEA 197
++GD A+ +F + R+VV+WTAM+VGY G EA
Sbjct: 338 EQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEA 397
Query: 198 KKLFDGMPPG 207
LF M G
Sbjct: 398 INLFRSMVGG 407
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 46/102 (45%), Gaps = 12/102 (11%)
Query: 116 PLVIKACSAMCRGLEGKSV------------HGSALRCGLEEDVFVGTSLIDMYGKCGEI 163
PL + +C L KSV H ++ GL V++ +L+++Y K G
Sbjct: 6 PLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYA 65
Query: 164 GDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGMP 205
ARK+FD M R SW ++ Y GD+ + FD +P
Sbjct: 66 LHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLP 107
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 60/126 (47%), Gaps = 3/126 (2%)
Query: 80 WNTLIKSHCQNSYFPA-TLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSA 138
WN +I + Y P + F +++ PD YT+ V+KAC+ + S+H
Sbjct: 338 WNGIITAFA--VYDPERAIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTARHALSIHAQV 395
Query: 139 LRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAK 198
++ G D + SLI Y KCG + +VFD M R+VVSW +M+ Y G V
Sbjct: 396 IKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSIL 455
Query: 199 KLFDGM 204
+F M
Sbjct: 456 PVFQKM 461
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 54/93 (58%), Gaps = 4/93 (4%)
Query: 115 YPLVIKACSAMCRGLEGKSVHGSALR---CGLEEDVFVGTSLIDMYGKCGEIGDARKVFD 171
Y + +AC+ L+G ++H L C ++V + LI+MY KCG I AR+VFD
Sbjct: 62 YAALFQACAEQRNLLDGINLHHHMLSHPYC-YSQNVILANFLINMYAKCGNILYARQVFD 120
Query: 172 RMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
M RNVVSWTA++ GYV AG+ E LF M
Sbjct: 121 TMPERNVVSWTALITGYVQAGNEQEGFCLFSSM 153
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 81/179 (45%), Gaps = 13/179 (7%)
Query: 18 ATLLKACKRTEHLQ---QIHACIIQRGL--EQDQFLISNFISLAHSLSTIAYSTTVFSRV 72
A L +AC +L +H ++ Q+ L + I++ I Y+ VF +
Sbjct: 63 AALFQACAEQRNLLDGINLHHHMLSHPYCYSQNVILANFLINMYAKCGNILYARQVFDTM 122
Query: 73 LSPTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGK 132
W LI + Q F+ M ++ P+ +T V+ +C R GK
Sbjct: 123 PERNVVSWTALITGYVQAGNEQEGFCLFSSMLSH-CFPNEFTLSSVLTSC----RYEPGK 177
Query: 133 SVHGSALRCGLEEDVFVGTSLIDMYGKCGEIG---DARKVFDRMSGRNVVSWTAMVVGY 188
VHG AL+ GL ++V ++I MYG+C + +A VF+ + +N+V+W +M+ +
Sbjct: 178 QVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIKFKNLVTWNSMIAAF 236
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 75/173 (43%), Gaps = 8/173 (4%)
Query: 18 ATLLKACK---RTEHLQQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLS 74
+++LKAC H IHA +I+ G D L ++ I ++ VF + S
Sbjct: 373 SSVLKACAGLVTARHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDS 432
Query: 75 PTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSV 134
WN+++K++ + + L F +M N PD+ T+ ++ ACS R EG +
Sbjct: 433 RDVVSWNSMLKAYSLHGQVDSILPVFQKMDIN---PDSATFIALLSACSHAGRVEEGLRI 489
Query: 135 HGSAL-RCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMS-GRNVVSWTAMV 185
S + + +IDM + +A +V +M + V W A++
Sbjct: 490 FRSMFEKPETLPQLNHYACVIDMLSRAERFAEAEEVIKQMPMDPDAVVWIALL 542
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 84/177 (47%), Gaps = 3/177 (1%)
Query: 31 QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTF-LWNTLIKSHCQ 89
+QIHA + + G + ++ + S+ + Y+ VF LW +I ++ +
Sbjct: 85 RQIHALVRKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTE 144
Query: 90 NSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCG--LEEDV 147
N + F RM+A D + + AC+ + G+ ++ +++ L D+
Sbjct: 145 NENSVEAIELFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDL 204
Query: 148 FVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
+ SL++MY K GE ARK+FD ++V ++T+M+ GY G E+ +LF M
Sbjct: 205 TLRNSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKM 261
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 56/113 (49%), Gaps = 2/113 (1%)
Query: 95 ATLSAFARMKANGSVPDTYTYPLVIKACSAM-CRGLEGKSVHGSALRCGLEEDVFVGTSL 153
A L R + + S D+++ IK SA L+G+ +H + G + + TSL
Sbjct: 47 ALLDFRHRFRQSPSFVDSFSVLFAIKVSSAQKASSLDGRQIHALVRKLGFNAVIQIQTSL 106
Query: 154 IDMYGKCGEIGDARKVFDRM-SGRNVVSWTAMVVGYVAAGDVVEAKKLFDGMP 205
+ Y G++ AR+VFD +N+V WTAM+ Y + VEA +LF M
Sbjct: 107 VGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRME 159
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 66/126 (52%), Gaps = 1/126 (0%)
Query: 80 WNTLIKSHCQNSYFPATLSAFARMKANGSV-PDTYTYPLVIKACSAMCRGLEGKSVHGSA 138
WN +I + +N + L A M + + P+ +++ + AC+ + K VH
Sbjct: 132 WNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAACARLGDLHHAKWVHSLM 191
Query: 139 LRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAK 198
+ G+E + + ++L+D+Y KCG+IG +R+VF + +V W AM+ G+ G EA
Sbjct: 192 IDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNAMITGFATHGLATEAI 251
Query: 199 KLFDGM 204
++F M
Sbjct: 252 RVFSEM 257
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 78/173 (45%), Gaps = 5/173 (2%)
Query: 18 ATLLKACKRT---EHLQQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLS 74
A+ L AC R H + +H+ +I G+E + L S + + I S VF V
Sbjct: 169 ASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKR 228
Query: 75 PTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSV 134
+WN +I + + F+ M+A PD+ T+ ++ CS EGK
Sbjct: 229 NDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEY 288
Query: 135 HG-SALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGR-NVVSWTAMV 185
G + R ++ + +++D+ G+ G + +A ++ + M +VV W +++
Sbjct: 289 FGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLL 341
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 73.9 bits (180), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 80/182 (43%), Gaps = 10/182 (5%)
Query: 33 IHACIIQRG-LEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQ-- 89
+H + + G L + + + + + + Y+ VF + T+ WN +I +C
Sbjct: 133 VHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYCSHK 192
Query: 90 ---NSYFPATLSAFARMKANGS--VPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGL- 143
N + F R GS P T V+ A S G VHG + G
Sbjct: 193 DKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFT 252
Query: 144 -EEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFD 202
E DVF+GT+L+DMY KCG + +A VF+ M +NV +WT+M G G E L +
Sbjct: 253 PEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETPNLLN 312
Query: 203 GM 204
M
Sbjct: 313 RM 314
Score = 67.4 bits (163), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 85/174 (48%), Gaps = 16/174 (9%)
Query: 31 QQIHACIIQRGLEQDQF---LISNFISL--AHSLSTIAYSTTVFSRVLSPTTFLWNTLIK 85
+QIHA ++ G + LI ++ S S S +A+ VF R P FL+NTL+K
Sbjct: 25 KQIHAQLVINGCHDNSLFGKLIGHYCSKPSTESSSKLAH-LLVFPRFGHPDKFLFNTLLK 83
Query: 86 SHCQNSYFPATLSAFARMKANGSV----PDTYTYPLVIKACSAMCRGLE-GKSVHGSALR 140
C ++ FA + S+ T+ + L A SA L G+ VHG +
Sbjct: 84 --CSKP--EDSIRIFANYASKSSLLYLNERTFVFVLGACARSASSSALRVGRIVHGMVKK 139
Query: 141 CG-LEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGD 193
G L E +GT+L+ Y K G++ ARKVFD M R V+W AM+ GY + D
Sbjct: 140 LGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYCSHKD 193
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 88/188 (46%), Gaps = 6/188 (3%)
Query: 20 LLKACKRTEHLQ---QIHACIIQRGLEQDQFLISNFISL--AHSLSTIAYSTTVFSRVLS 74
+L AC R QIH I++ G F+ ++ +SL S S+ +F +
Sbjct: 187 ILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDVLKLFDEIPQ 246
Query: 75 PTTFLWNTLIKSHCQNSYFPATLSAFARM-KANGSVPDTYTYPLVIKACSAMCRGLEGKS 133
WNT++ S + F M + G D++T ++ +C+ L G+
Sbjct: 247 RDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRE 306
Query: 134 VHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGD 193
+HG A+R GL +++ V +LI Y K ++ +++ M ++ V++T M+ Y++ G
Sbjct: 307 LHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGM 366
Query: 194 VVEAKKLF 201
V A ++F
Sbjct: 367 VDSAVEIF 374
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 81/180 (45%), Gaps = 10/180 (5%)
Query: 31 QQIHACIIQRGLEQDQF---LISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSH 87
+ +HA ++ E+ + LIS ++ L I VF + SPT + LI
Sbjct: 100 KAVHASFLKLREEKTRLGNALISTYLKLGFPREAI----LVFVSLSSPTVVSYTALISGF 155
Query: 88 CQNSYFPATLSAFARMKANGSV-PDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEED 146
+ + L F RM+ G V P+ YT+ ++ AC + R G +HG ++ G
Sbjct: 156 SRLNLEIEALKVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNS 215
Query: 147 VFVGTSLIDMYGK--CGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
VFV SL+ +Y K D K+FD + R+V SW +V V G +A LF M
Sbjct: 216 VFVSNSLMSLYDKDSGSSCDDVLKLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEM 275
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 49/94 (52%)
Query: 111 DTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVF 170
D + L++ C + G +H AL+ G D+ +G SLI MY KC + DA K+F
Sbjct: 520 DEVSLTLILAVCGTLGFREMGYQIHCYALKAGYFSDISLGNSLISMYAKCCDSDDAIKIF 579
Query: 171 DRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
+ M +V+SW +++ Y+ + EA L+ M
Sbjct: 580 NTMREHDVISWNSLISCYILQRNGDEALALWSRM 613
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 70/162 (43%), Gaps = 2/162 (1%)
Query: 42 LEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQNSYFPATLSAFA 101
+ QD + I+ S + + +F+ V T +N L+ C+N + L F
Sbjct: 347 MAQDAVTFTEMITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFT 406
Query: 102 RMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVGTSLIDMYGKCG 161
M G ++ + AC + + +HG ++ G + + T+L+DM +C
Sbjct: 407 DMLQRGVELTDFSLTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCE 466
Query: 162 EIGDARKVFDRMSGR--NVVSWTAMVVGYVAAGDVVEAKKLF 201
+ DA ++FD+ + + T+++ GY G +A LF
Sbjct: 467 RMADAEEMFDQWPSNLDSSKATTSIIGGYARNGLPDKAVSLF 508
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 70.9 bits (172), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 70/130 (53%)
Query: 76 TTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVH 135
T ++NTLI+S+ + +L+ F M A+ P+ T+P +IKA + G ++H
Sbjct: 50 TKCVYNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVALH 109
Query: 136 GSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVV 195
G AL+ G D FV TS + YG+ G++ +RK+FD + VV+ +++ G++
Sbjct: 110 GQALKRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMD 169
Query: 196 EAKKLFDGMP 205
A + F MP
Sbjct: 170 YAFEYFQRMP 179
Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 87/208 (41%), Gaps = 36/208 (17%)
Query: 33 IHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQNSY 92
+H ++RG D F+ ++F+ + + S +F +L+P N+L+ + +N
Sbjct: 108 LHGQALKRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGE 167
Query: 93 FPATLSAFARMKANGSV----------------------------------PDTYTYPLV 118
F RM V P+ T+ V
Sbjct: 168 MDYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSV 227
Query: 119 IKACSAMCRG--LEGKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGR 176
+ +C+ +G GK +HG + + +GT+L+DMYGK G++ A +FD++ +
Sbjct: 228 LSSCANFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDK 287
Query: 177 NVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
V +W A++ + G +A ++F+ M
Sbjct: 288 KVCAWNAIISALASNGRPKQALEMFEMM 315
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 70.9 bits (172), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 67/135 (49%), Gaps = 4/135 (2%)
Query: 74 SPTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKS 133
+P ++T++ +C+ MK G P++Y Y +I +C+ E +
Sbjct: 278 TPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEE 337
Query: 134 VHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGR----NVVSWTAMVVGYV 189
+R G+ D V T+LID + K G+I A K F M R +V+++TA++ G+
Sbjct: 338 AFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFC 397
Query: 190 AAGDVVEAKKLFDGM 204
GD+VEA KLF M
Sbjct: 398 QIGDMVEAGKLFHEM 412
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 68/173 (39%), Gaps = 8/173 (4%)
Query: 40 RGLEQDQF----LISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQNSYFPA 95
+GLE D LI+ + H + SP + TLI C+ +
Sbjct: 415 KGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDS 474
Query: 96 TLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVGTSLID 155
M G P+ +TY ++ E + G GL D T+L+D
Sbjct: 475 ANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMD 534
Query: 156 MYGKCGEIGDARKVFDRMSGR----NVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
Y K GE+ A+++ M G+ +V++ ++ G+ G + + +KL + M
Sbjct: 535 AYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWM 587
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 78/189 (41%), Gaps = 9/189 (4%)
Query: 20 LLKACKRTEHLQQIHACIIQRGLEQDQF----LISNFISLAHSLSTIAYSTTVFSRVLSP 75
L + CK E ++ + +I++G+ D LI F + + + SR ++P
Sbjct: 326 LCRICKLAEA-EEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITP 384
Query: 76 TTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVH 135
+ +I CQ F M G PD+ T+ +I + VH
Sbjct: 385 DVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVH 444
Query: 136 GSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSG----RNVVSWTAMVVGYVAA 191
++ G +V T+LID K G++ A ++ M N+ ++ ++V G +
Sbjct: 445 NHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKS 504
Query: 192 GDVVEAKKL 200
G++ EA KL
Sbjct: 505 GNIEEAVKL 513
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 70.9 bits (172), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 67/135 (49%), Gaps = 4/135 (2%)
Query: 74 SPTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKS 133
+P ++T++ +C+ MK G P++Y Y +I +C+ E +
Sbjct: 278 TPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEE 337
Query: 134 VHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGR----NVVSWTAMVVGYV 189
+R G+ D V T+LID + K G+I A K F M R +V+++TA++ G+
Sbjct: 338 AFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFC 397
Query: 190 AAGDVVEAKKLFDGM 204
GD+VEA KLF M
Sbjct: 398 QIGDMVEAGKLFHEM 412
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 68/173 (39%), Gaps = 8/173 (4%)
Query: 40 RGLEQDQF----LISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQNSYFPA 95
+GLE D LI+ + H + SP + TLI C+ +
Sbjct: 415 KGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDS 474
Query: 96 TLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVGTSLID 155
M G P+ +TY ++ E + G GL D T+L+D
Sbjct: 475 ANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMD 534
Query: 156 MYGKCGEIGDARKVFDRMSGR----NVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
Y K GE+ A+++ M G+ +V++ ++ G+ G + + +KL + M
Sbjct: 535 AYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWM 587
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 78/189 (41%), Gaps = 9/189 (4%)
Query: 20 LLKACKRTEHLQQIHACIIQRGLEQDQF----LISNFISLAHSLSTIAYSTTVFSRVLSP 75
L + CK E ++ + +I++G+ D LI F + + + SR ++P
Sbjct: 326 LCRICKLAEA-EEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITP 384
Query: 76 TTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVH 135
+ +I CQ F M G PD+ T+ +I + VH
Sbjct: 385 DVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVH 444
Query: 136 GSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSG----RNVVSWTAMVVGYVAA 191
++ G +V T+LID K G++ A ++ M N+ ++ ++V G +
Sbjct: 445 NHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKS 504
Query: 192 GDVVEAKKL 200
G++ EA KL
Sbjct: 505 GNIEEAVKL 513
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 67.4 bits (163), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 69/134 (51%), Gaps = 6/134 (4%)
Query: 74 SPTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTY-PLVIKACSAMCRGLEGK 132
P ++NT+I S C+ L MK G PD TY L+ + + G+ +
Sbjct: 181 EPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSAR 240
Query: 133 SVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGR----NVVSWTAMVVGY 188
+ +R G+ DV ++LID+YGK G++ +A+K ++ M R N+V++ +++ G
Sbjct: 241 -ILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGL 299
Query: 189 VAAGDVVEAKKLFD 202
G + EAKK+ +
Sbjct: 300 CIHGLLDEAKKVLN 313
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 67.0 bits (162), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 64/140 (45%), Gaps = 4/140 (2%)
Query: 68 VFSRVLSPTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCR 127
+F ++ W +I QN F S + M G P TY +++ + A
Sbjct: 422 LFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSN 481
Query: 128 GLEGKSVH---GSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAM 184
+GK +H C + D+ + SL+ MY KCG I DA ++F +M ++ VSW +M
Sbjct: 482 LDQGKHIHCVIAKTTAC-YDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKDTVSWNSM 540
Query: 185 VVGYVAAGDVVEAKKLFDGM 204
++G G +A LF M
Sbjct: 541 IMGLSHHGLADKALNLFKEM 560
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 30/45 (66%)
Query: 161 GEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGMP 205
G DA ++FD M RNVVSW +V G + GD+ +AK++FD MP
Sbjct: 152 GRSEDAVELFDEMPERNVVSWNTLVTGLIRNGDMEKAKQVFDAMP 196
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 37/60 (61%)
Query: 146 DVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGMP 205
DV ++I Y + + +A+ +F MS +NVV+WT+MV GY GDV EA +LF MP
Sbjct: 199 DVVSWNAMIKGYIENDGMEEAKLLFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMP 258
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 62/140 (44%), Gaps = 14/140 (10%)
Query: 65 STTVFSRVLSPTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSA 124
+ +F + WNTL+ +N F M + V + +A
Sbjct: 157 AVELFDEMPERNVVSWNTLVTGLIRNGDMEKAKQVFDAMPSRDVV-----------SWNA 205
Query: 125 MCRG-LEGKSVHGSALRCG--LEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSW 181
M +G +E + + L G E++V TS++ Y + G++ +A ++F M RN+VSW
Sbjct: 206 MIKGYIENDGMEEAKLLFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSW 265
Query: 182 TAMVVGYVAAGDVVEAKKLF 201
TAM+ G+ EA LF
Sbjct: 266 TAMISGFAWNELYREALMLF 285
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 69/136 (50%), Gaps = 4/136 (2%)
Query: 73 LSPTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGK 132
L P ++NT+I C+ + L+ F M+ G P+ TY +I R +
Sbjct: 252 LEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDAS 311
Query: 133 SVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGR----NVVSWTAMVVGY 188
+ + + DVF ++LID + K G++ +A K++D M R ++V++++++ G+
Sbjct: 312 RLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGF 371
Query: 189 VAAGDVVEAKKLFDGM 204
+ EAK++F+ M
Sbjct: 372 CMHDRLDEAKQMFEFM 387
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 89/193 (46%), Gaps = 7/193 (3%)
Query: 20 LLKACKRTEHL---QQIHACIIQRGLEQ--DQFLISNFISLAHSLSTIAYSTTVFSRV-L 73
LL+ C L +++HA + GL++ +L + S + + +F + L
Sbjct: 12 LLRHCAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPL 71
Query: 74 SPTTFL-WNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGK 132
S + W TL+ S + ++ F M+ D + + C+ + +
Sbjct: 72 SEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQ 131
Query: 133 SVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAG 192
HG A++ G+ V V +L+DMYGKCG + + +++F+ + ++VVSWT ++ V
Sbjct: 132 QGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWE 191
Query: 193 DVVEAKKLFDGMP 205
+ +++F MP
Sbjct: 192 GLERGREVFHEMP 204
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 64/146 (43%), Gaps = 11/146 (7%)
Query: 68 VFSRVLSPTTFLWNTLIKSHCQNSYFPATLSAFARMKAN-GSVPDTYTYPLVIKACSAMC 126
VF + W ++ + + L A M G + T ++ AC+
Sbjct: 199 VFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSG 258
Query: 127 RGLEGKSVHGSALR----CGLE---EDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVV 179
+ G+ VH AL+ G E +DV VGT+L+DMY KCG I + VF M RNVV
Sbjct: 259 NLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLMRKRNVV 318
Query: 180 SWTAMVVGYVAAGDVVEAKKLFDGMP 205
+W A+ G G + + + D P
Sbjct: 319 TWNALFSGLAMHG---KGRMVIDMFP 341
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 77/179 (43%), Gaps = 13/179 (7%)
Query: 41 GLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLS----PTTFLWNTLIKSHCQNSYFPAT 96
G++ D+ + I + + ++ T F R+LS P WNTLI HC++
Sbjct: 439 GVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVA 498
Query: 97 LSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVGTSLIDM 156
F M+ G +P TY ++I + R + K + G G+ +V T+L+D+
Sbjct: 499 EEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDV 558
Query: 157 YGKCGEIGDARKVFDRMSGRNV----VSWTAMVVGYVAAGDVVEAKKLF-----DGMPP 206
YGK G DA + + M + + A++ Y G +A F DG+ P
Sbjct: 559 YGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKP 617
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 66/136 (48%), Gaps = 6/136 (4%)
Query: 73 LSPTTFLWNTLIKSHCQNSYFPATLSAFARMKANG-SVPDTYTYPLVIKACSAMCRGLEG 131
L P T ++N L+K HC+N MK +G S P++ TY ++ A R E
Sbjct: 192 LQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEA 251
Query: 132 KSVHGSAL-RCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGR----NVVSWTAMVV 186
+ + + G+ D +I+ + + GE+ A+K+ D M NV +++A++
Sbjct: 252 VELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMN 311
Query: 187 GYVAAGDVVEAKKLFD 202
G+ G + EAK+ FD
Sbjct: 312 GFCKVGKIQEAKQTFD 327
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 69/149 (46%), Gaps = 11/149 (7%)
Query: 63 AYSTTVFSRVLSPT---TFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVI 119
AY + V +L T L N L K N F M+ G PD ++Y ++I
Sbjct: 579 AYRSMVDQGILGDAKTYTVLMNGLFK----NDKVDDAEEIFREMRGKGIAPDVFSYGVLI 634
Query: 120 KACSAMCRGLEGKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGR--- 176
S + + S+ + GL +V + L+ + + GEI A+++ D MS +
Sbjct: 635 NGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLH 694
Query: 177 -NVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
N V++ ++ GY +GD+ EA +LFD M
Sbjct: 695 PNAVTYCTIIDGYCKSGDLAEAFRLFDEM 723
Score = 53.5 bits (127), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 52/127 (40%), Gaps = 4/127 (3%)
Query: 75 PTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSV 134
P ++ TLIK+ QNS F + MK G PD + Y +I S R E +S
Sbjct: 450 PNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSF 509
Query: 135 HGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSG----RNVVSWTAMVVGYVA 190
+ GL+ + F + I Y + E A K M N V T ++ Y
Sbjct: 510 LVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCK 569
Query: 191 AGDVVEA 197
G V+EA
Sbjct: 570 KGKVIEA 576
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 69/141 (48%), Gaps = 4/141 (2%)
Query: 68 VFSRVLSPTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCR 127
+ R + P +N+LI C++ F + + M G VPD +TY +I + R
Sbjct: 453 MLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKR 512
Query: 128 GLEGKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNV----VSWTA 183
E + S + G+ +V + T+LID Y K G++ +A + ++M +N +++ A
Sbjct: 513 VEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNA 572
Query: 184 MVVGYVAAGDVVEAKKLFDGM 204
++ G A G + EA L + M
Sbjct: 573 LIHGLCADGKLKEATLLEEKM 593
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 68/146 (46%), Gaps = 19/146 (13%)
Query: 70 SRVLSPTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGL 129
SR LSP T +N LIK +C+++ A + +M +PD TY +I CR
Sbjct: 421 SRKLSPNTRTYNELIKGYCKSNVHKA-MGVLNKMLERKVLPDVVTYNSLI---DGQCRS- 475
Query: 130 EGKSVHGSALRC-------GLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGR----NV 178
SA R GL D + TS+ID K + +A +FD + + NV
Sbjct: 476 ---GNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNV 532
Query: 179 VSWTAMVVGYVAAGDVVEAKKLFDGM 204
V +TA++ GY AG V EA + + M
Sbjct: 533 VMYTALIDGYCKAGKVDEAHLMLEKM 558
Score = 57.0 bits (136), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 74/178 (41%), Gaps = 22/178 (12%)
Query: 21 LKACKRTE--HLQQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTF 78
LK C+R E + IH + R +++ A L F PT
Sbjct: 281 LKGCRRNEVAYTHLIHGLCVARRIDE-----------AMDLFVKMKDDECF-----PTVR 324
Query: 79 LWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSA 138
+ LIKS C + L+ M+ G P+ +TY ++I + + C+ + + + G
Sbjct: 325 TYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQM 384
Query: 139 LRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGR----NVVSWTAMVVGYVAAG 192
L GL +V +LI+ Y K G I DA V + M R N ++ ++ GY +
Sbjct: 385 LEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN 442
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 56/104 (53%), Gaps = 4/104 (3%)
Query: 106 NGSVP--DTYTYPLVIKACSA--MCRGLEGKSVHGSALRCGLEEDVFVGTSLIDMYGKCG 161
N S+P D++TY ++KA S L G +HG L+ G E V+V T+L+ MY G
Sbjct: 113 NKSLPPFDSFTYLFLLKASSNPRFPSLLLGIGLHGLTLKLGFESHVYVQTALVGMYLVGG 172
Query: 162 EIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGMP 205
+ DA KVFD M RN V+W M+ G GD +A + MP
Sbjct: 173 NMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFLEKMP 216
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 59/133 (44%), Gaps = 4/133 (3%)
Query: 76 TTFLWNTLIKSHCQNSYFPATLSAFARMKANGSV-PDTYTYPLVIKACSAMCRGLEGKSV 134
T W T+I + + + F+RM A ++ P+ T ++ A + SV
Sbjct: 219 TVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDLKMCGSV 278
Query: 135 HGSALRCGLEE-DVFVGTSLIDMYGKCGEIGDARKVFDRMSG--RNVVSWTAMVVGYVAA 191
H + G D+ V SLID Y KCG I A K F + +N+VSWT M+ +
Sbjct: 279 HAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAFAIH 338
Query: 192 GDVVEAKKLFDGM 204
G EA +F M
Sbjct: 339 GMGKEAVSMFKDM 351
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 61.2 bits (147), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 79/175 (45%), Gaps = 18/175 (10%)
Query: 33 IHACIIQRGLEQDQFLIS--NFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQN 90
I II GL ++ FL+ N S A S R ++ T +N+LI CQ
Sbjct: 656 IDYTIIINGLCKEGFLVKALNLCSFAKS------------RGVTLNTITYNSLINGLCQQ 703
Query: 91 SYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVG 150
L F ++ G VP TY ++I L+ + + S + GL ++ +
Sbjct: 704 GCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIY 763
Query: 151 TSLIDMYGKCGEIGDARKVFDR-MSGR---NVVSWTAMVVGYVAAGDVVEAKKLF 201
S++D Y K G+ DA +V R M GR + + ++M+ GY GD+ EA +F
Sbjct: 764 NSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVF 818
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 72/169 (42%), Gaps = 3/169 (1%)
Query: 21 LKACKRTEHLQQIHACIIQRGLEQDQFLISN-FISLAHSLSTIAYSTTVFSRVLSPTTFL 79
L C R H +QIH I G+ + ++ N + + L Y+ +VF +
Sbjct: 145 LVTCVR--HGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDRDVVS 202
Query: 80 WNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSAL 139
WN LI S + L F M+ PD YT +V+ CS + +GK +
Sbjct: 203 WNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQALALCI 262
Query: 140 RCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGY 188
+ G + V + IDM+ KC + D+ K+F + + V +M+ Y
Sbjct: 263 KMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSY 311
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 79/174 (45%), Gaps = 1/174 (0%)
Query: 31 QQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQN 90
+Q A I+ G + ++ I + + + S +F + + L N++I S+ +
Sbjct: 255 KQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSYSWH 314
Query: 91 SYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVG 150
L F PD +T+ V+ + +A+ G VH ++ G + D V
Sbjct: 315 CCGEDALRLFILAMTQSVRPDKFTFSSVLSSMNAVMLD-HGADVHSLVIKLGFDLDTAVA 373
Query: 151 TSLIDMYGKCGEIGDARKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
TSL++MY K G + A VF + G++++ W +++G VE+ +F+ +
Sbjct: 374 TSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLARNSRAVESLAIFNQL 427
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/193 (19%), Positives = 75/193 (38%), Gaps = 35/193 (18%)
Query: 33 IHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQNSY 92
+HA +++ G + + + + L ++ + +F + T WN +K +N Y
Sbjct: 26 VHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQLFDDIPDKNTITWNVCLKGLFKNGY 85
Query: 93 FPATLSAFARMKANGSV-------------------------------PDTYTYPLVIKA 121
L F M V P +T+ ++
Sbjct: 86 LNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEFTFSILASL 145
Query: 122 CSAMCRGLEGKSVHGSALRCGLEE-DVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVVS 180
+ + G+ +HG+A+ G+ ++ V S++DMY + G A VF M R+VVS
Sbjct: 146 VTCV---RHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDRDVVS 202
Query: 181 WTAMVVGYVAAGD 193
W +++ +G+
Sbjct: 203 WNCLILSCSDSGN 215
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 60.5 bits (145), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 68/133 (51%), Gaps = 4/133 (3%)
Query: 73 LSPTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGK 132
+ P ++ T+I S C+N + LS F +M+ G PD Y ++ R +
Sbjct: 173 IKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDAD 232
Query: 133 SVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFD---RMS-GRNVVSWTAMVVGY 188
S+ + ++ DV +LID + K G+ DA ++++ RMS N+ ++T+++ G+
Sbjct: 233 SLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGF 292
Query: 189 VAAGDVVEAKKLF 201
G V EA+++F
Sbjct: 293 CMEGCVDEARQMF 305
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 64/148 (43%), Gaps = 11/148 (7%)
Query: 70 SRVLSPTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKA-CSAMCRG 128
R + P +N LI + + F + M P+ +TY +I C C
Sbjct: 240 KRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVD 299
Query: 129 LEGKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGR----NVVSWTAM 184
E + + G DV TSLI+ + KC ++ DA K+F MS + N +++T +
Sbjct: 300 -EARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTL 358
Query: 185 VVGYVAAGDVVEAKKLFD-----GMPPG 207
+ G+ G A+++F G+PP
Sbjct: 359 IQGFGQVGKPNVAQEVFSHMVSRGVPPN 386
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 61/129 (47%), Gaps = 6/129 (4%)
Query: 81 NTLIKSHCQNSYFPATLSAF-ARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSAL 139
N L+ CQ+S P S+F +M G PD T+ +I R E S+ +
Sbjct: 111 NLLMNCFCQSSQ-PYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMV 169
Query: 140 RCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGR----NVVSWTAMVVGYVAAGDVV 195
G++ DV + T++ID K G + A +FD+M +VV +T++V G +G
Sbjct: 170 EMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWR 229
Query: 196 EAKKLFDGM 204
+A L GM
Sbjct: 230 DADSLLRGM 238
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 51/98 (52%)
Query: 107 GSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDA 166
G++PD + L+ ++C+ + K VH L+ D + +I M+G+C I DA
Sbjct: 231 GAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECSSITDA 290
Query: 167 RKVFDRMSGRNVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
++VFD M +++ SW M+ Y G +A LF+ M
Sbjct: 291 KRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEM 328
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 71/144 (49%), Gaps = 10/144 (6%)
Query: 68 VFSRVLSPTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCR 127
+ R L PT +NTLI +C+ +M+ + + PD +TY +I +A+C+
Sbjct: 266 ITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALI---NALCK 322
Query: 128 GLEGKSVHG---SALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGR----NVVS 180
+ HG + GL + + T+LI + + GEI ++ + +M + ++V
Sbjct: 323 ENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVL 382
Query: 181 WTAMVVGYVAAGDVVEAKKLFDGM 204
+ +V G+ GD+V A+ + DGM
Sbjct: 383 YNTLVNGFCKNGDLVAARNIVDGM 406
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 61/138 (44%), Gaps = 4/138 (2%)
Query: 71 RVLSPTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLE 130
R L P ++ TLI H +N ++ +M + G PD Y ++ +
Sbjct: 339 RGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVA 398
Query: 131 GKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNV----VSWTAMVV 186
+++ +R GL D T+LID + + G++ A ++ M + V ++A+V
Sbjct: 399 ARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVC 458
Query: 187 GYVAAGDVVEAKKLFDGM 204
G G V++A++ M
Sbjct: 459 GMCKEGRVIDAERALREM 476
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 69/140 (49%), Gaps = 12/140 (8%)
Query: 73 LSPTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGK 132
L P T +N LI + C+ P + F M G PD YT+ +I S +C E K
Sbjct: 455 LKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLI---SGLCEVDEIK 511
Query: 133 SVHGSALRCGLEEDVFVGT----SLIDMYGKCGEIGDARKVFDRM----SGRNVVSWTAM 184
LR + E V T +LI+ + + GEI +ARK+ + M S + +++ ++
Sbjct: 512 HALW-LLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSL 570
Query: 185 VVGYVAAGDVVEAKKLFDGM 204
+ G AG+V +A+ LF+ M
Sbjct: 571 IKGLCRAGEVDKARSLFEKM 590
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 63/127 (49%), Gaps = 4/127 (3%)
Query: 79 LWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSA 138
+++T+I S C+ + L+ F M G PD +TY +I R + +
Sbjct: 242 IYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDM 301
Query: 139 LRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGR----NVVSWTAMVVGYVAAGDV 194
L + +V SLID + K G++ +A K+FD M R N+V++ +++ G+ +
Sbjct: 302 LERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRL 361
Query: 195 VEAKKLF 201
EA+++F
Sbjct: 362 DEAQQIF 368
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 73/173 (42%), Gaps = 8/173 (4%)
Query: 40 RGLEQDQF----LISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQNSYFPA 95
RGL D +I F + T+ + + P +N LI C+ P
Sbjct: 291 RGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPI 350
Query: 96 TLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVGTSLID 155
L + MK NG P+ +Y ++ A + + R GL + + TSLID
Sbjct: 351 GLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLID 410
Query: 156 MYGKCGEIGDARKVFDRM----SGRNVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
K G + DA ++ + M NVV++TA++ G A + EA++LF M
Sbjct: 411 ANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKM 463
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 65/136 (47%), Gaps = 4/136 (2%)
Query: 73 LSPTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGK 132
L P ++TL+ + C+ + + M+ G VP+ YTY +I A + +
Sbjct: 363 LKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAF 422
Query: 133 SVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGR----NVVSWTAMVVGY 188
+ L+ G+E +V T+LID + +A ++F +M N+ S+ A++ G+
Sbjct: 423 RLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGF 482
Query: 189 VAAGDVVEAKKLFDGM 204
V A ++ A +L + +
Sbjct: 483 VKAKNMDRALELLNEL 498
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 57/134 (42%), Gaps = 4/134 (2%)
Query: 75 PTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSV 134
PT F +N +I C+ A F MK G VPDT TY +I + R +
Sbjct: 260 PTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCF 319
Query: 135 HGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGR----NVVSWTAMVVGYVA 190
E DV +LI+ + K G++ + + M G NVVS++ +V +
Sbjct: 320 FEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCK 379
Query: 191 AGDVVEAKKLFDGM 204
G + +A K + M
Sbjct: 380 EGMMQQAIKFYVDM 393
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 64/134 (47%), Gaps = 4/134 (2%)
Query: 75 PTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSV 134
P ++NT+I C+N L F M+ G D TY +I S R + +
Sbjct: 182 PNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARL 241
Query: 135 HGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGR----NVVSWTAMVVGYVA 190
++ ++ +V T+LID + K G + +AR ++ M R NV ++ +++ G+
Sbjct: 242 LRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCI 301
Query: 191 AGDVVEAKKLFDGM 204
G + +AK +FD M
Sbjct: 302 HGCLGDAKYMFDLM 315
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 52/126 (41%)
Query: 48 LISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQNSYFPATLSAFARMKANG 107
LI F+ + L + R + P F +N+LI C + F M + G
Sbjct: 260 LIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKG 319
Query: 108 SVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDAR 167
PD TY +I R +G + GL D F +LI Y + G++ A+
Sbjct: 320 CFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQ 379
Query: 168 KVFDRM 173
KVF+RM
Sbjct: 380 KVFNRM 385
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 85/173 (49%), Gaps = 8/173 (4%)
Query: 37 IIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVL----SPTTFLWNTLIKSHCQNSY 92
+++ G E D ++ ++ + I + +F ++L P + TLI+ C+N +
Sbjct: 144 MMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRH 203
Query: 93 FPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVGTS 152
+ F +M NGS P+ TY ++ + R + + ++ +E +V T+
Sbjct: 204 LNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTA 263
Query: 153 LIDMYGKCGEIGDARKVFDRMSGR----NVVSWTAMVVGYVAAGDVVEAKKLF 201
LID + K G++ +A+++++ M +V ++ +++ G G + EA+++F
Sbjct: 264 LIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMF 316
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 68/146 (46%), Gaps = 3/146 (2%)
Query: 62 IAYSTTVFSRVLSPTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKA 121
I+ + S + P +N LI C+N L F +K G+VP T Y ++I A
Sbjct: 351 ISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDA 410
Query: 122 CSAMCRGLEGKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGR---NV 178
+ + +G ++ R G+ DV LI + G I A+K+FD+++ + ++
Sbjct: 411 YCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLPDL 470
Query: 179 VSWTAMVVGYVAAGDVVEAKKLFDGM 204
V++ ++ GY G+ +A L M
Sbjct: 471 VTFHILMEGYCRKGESRKAAMLLKEM 496
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 59/148 (39%), Gaps = 8/148 (5%)
Query: 65 STTVFSRVLS----PTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIK 120
S VF +L P +N+LI C +S +M + G P+ TY +I
Sbjct: 315 SMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALIN 374
Query: 121 ACSAMCRGLEGKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVV- 179
E + GS G + LID Y K G+I D + + M +V
Sbjct: 375 GFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVP 434
Query: 180 ---SWTAMVVGYVAAGDVVEAKKLFDGM 204
++ ++ G G++ AKKLFD +
Sbjct: 435 DVGTYNCLIAGLCRNGNIEAAKKLFDQL 462
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 50/98 (51%)
Query: 73 LSPTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGK 132
+ P +N LI+S C ++ FA+MK NG PD Y Y I++ M + + +
Sbjct: 526 IEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAE 585
Query: 133 SVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVF 170
+ + LR GL+ D F ++LI + G +AR++F
Sbjct: 586 ELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREMF 623
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 69/140 (49%), Gaps = 11/140 (7%)
Query: 73 LSPTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRG---- 128
+S ++ + LI ++ + + +F RMK PD +TY ++++ M R
Sbjct: 123 VSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRV---MMREEVFF 179
Query: 129 LEGKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGR----NVVSWTAM 184
+ +V+ L+C +++ L+D K G DA+K+FD M+GR N V++T +
Sbjct: 180 MLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTIL 239
Query: 185 VVGYVAAGDVVEAKKLFDGM 204
+ G G +A+KLF M
Sbjct: 240 ISGLCQRGSADDARKLFYEM 259
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 82/191 (42%), Gaps = 10/191 (5%)
Query: 24 CK--RTEHLQQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVL----SPTT 77
CK +H +I ++Q G + D + ++ IS L + + V +++ SP T
Sbjct: 306 CKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNT 365
Query: 78 FLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGS 137
+NTLI + C+ + + + G +PD T+ +I+ +
Sbjct: 366 VTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEE 425
Query: 138 ALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMS----GRNVVSWTAMVVGYVAAGD 193
G E D F LID G++ +A + +M R+V+++ ++ G+ A
Sbjct: 426 MRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANK 485
Query: 194 VVEAKKLFDGM 204
EA+++FD M
Sbjct: 486 TREAEEIFDEM 496
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 66/147 (44%), Gaps = 9/147 (6%)
Query: 67 TVFSRVLS-----PTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKA 121
T +RVL+ P +N+LI+ C + F M++ G PD +TY ++I +
Sbjct: 385 TELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDS 444
Query: 122 CSAMCRGLEGKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMS----GRN 177
+ + E ++ G V +LID + K + +A ++FD M RN
Sbjct: 445 LCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRN 504
Query: 178 VVSWTAMVVGYVAAGDVVEAKKLFDGM 204
V++ ++ G + V +A +L D M
Sbjct: 505 SVTYNTLIDGLCKSRRVEDAAQLMDQM 531
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 72/167 (43%), Gaps = 11/167 (6%)
Query: 49 ISNFISLAHSLSTIAYSTTVFSRVL-------SPTTFLWNTLIKSHCQNSYFPATLSAFA 101
I F SL H + FS V+ P ++NTLI C+N L
Sbjct: 141 IVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLN 200
Query: 102 RMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVGTSLIDMYGKCG 161
M+ G D TY ++ R + + ++ + DV T+LID++ K G
Sbjct: 201 EMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQG 260
Query: 162 EIGDARKVFDRMSGRNV----VSWTAMVVGYVAAGDVVEAKKLFDGM 204
+ +A++++ M +V V++ +++ G G + +AKK FD M
Sbjct: 261 NLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLM 307
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 67/162 (41%), Gaps = 5/162 (3%)
Query: 48 LISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQNSYFPATLSAFARMKANG 107
LIS++ L + S I + + PT ++ TL+ + + L F MK G
Sbjct: 239 LISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAG 298
Query: 108 SVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDAR 167
P YTY +IK R E + LR GL DV +L+++ GK G + +
Sbjct: 299 CSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELT 358
Query: 168 KVFDRMS----GRNVVSWTAMVVG-YVAAGDVVEAKKLFDGM 204
VF M VVS+ ++ + + V E FD M
Sbjct: 359 NVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKM 400
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/176 (20%), Positives = 80/176 (45%), Gaps = 8/176 (4%)
Query: 37 IIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRV----LSPTTFLWNTLIKSHCQNSY 92
++QRG + D ++ I + ++ ++ + ++NT+I C+ +
Sbjct: 214 MVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKH 273
Query: 93 FPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVGTS 152
L+ F M G PD +TY +I R + + + + +V ++
Sbjct: 274 MDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSA 333
Query: 153 LIDMYGKCGEIGDARKVFDRMSGR----NVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
LID + K G++ +A K++D M R ++ ++++++ G+ + EAK +F+ M
Sbjct: 334 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 389
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 61/134 (45%), Gaps = 11/134 (8%)
Query: 75 PTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSV 134
P + +I +C + + F MK VPD TY +++K E K+
Sbjct: 696 PDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKNKPERNLSREMKAF 755
Query: 135 HGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNV----VSWTAMVVGYVA 190
++ DVF T LID K G++G+A+++FD+M V +TA++
Sbjct: 756 D-------VKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCK 808
Query: 191 AGDVVEAKKLFDGM 204
G + EAK +FD M
Sbjct: 809 MGYLKEAKMIFDRM 822
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 61/136 (44%), Gaps = 4/136 (2%)
Query: 73 LSPTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGK 132
L P F +NT+I+ C+ L MK +G T+ ++I A + E
Sbjct: 173 LMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAM 232
Query: 133 SVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRN----VVSWTAMVVGY 188
GLE D+ V TSLI + CGE+ + +FD + R +++ ++ G+
Sbjct: 233 GFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGF 292
Query: 189 VAAGDVVEAKKLFDGM 204
G + EA ++F+ M
Sbjct: 293 CKLGQLKEASEIFEFM 308
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 79/188 (42%), Gaps = 14/188 (7%)
Query: 32 QIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVL----SPTTFLWNTLIKSH 87
H +++RG + N + S+ I ++ + S VL +P + TLI
Sbjct: 238 DFHRLVMERGFRV-GIVSCNKVLKGLSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGF 296
Query: 88 CQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDV 147
C+ F M+ G PD Y +I G + AL G++ DV
Sbjct: 297 CKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDV 356
Query: 148 FVGTSLIDMYGKCGEIGDARKVFDRMSGR----NVVSWTAMVVGYVAAGDVVEAKKLFD- 202
V +S ID+Y K G++ A V+ RM + NVV++T ++ G G + EA ++
Sbjct: 357 VVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQ 416
Query: 203 ----GMPP 206
GM P
Sbjct: 417 ILKRGMEP 424
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 78/187 (41%), Gaps = 10/187 (5%)
Query: 24 CKRTEHLQ--QIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSP----TT 77
CKR E + + + QRG+E D S I + +FS+ L
Sbjct: 297 CKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDV 356
Query: 78 FLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGS 137
++++ I + ++ + RM G P+ TY ++IK R E ++G
Sbjct: 357 VVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQ 416
Query: 138 ALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGR----NVVSWTAMVVGYVAAGD 193
L+ G+E + +SLID + KCG + +++ M +VV + +V G G
Sbjct: 417 ILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGL 476
Query: 194 VVEAKKL 200
++ A +
Sbjct: 477 MLHAMRF 483
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 74/172 (43%), Gaps = 8/172 (4%)
Query: 38 IQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVL----SPTTFLWNTLIKSHCQNSYF 93
+ +G++ D + S+ I + +A ++ V+ R+L SP + LIK CQ+
Sbjct: 348 LHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRI 407
Query: 94 PATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVGTSL 153
+ ++ G P TY +I G +++ ++ G DV + L
Sbjct: 408 YEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVL 467
Query: 154 IDMYGKCGEIGDARKVFDRMSGR----NVVSWTAMVVGYVAAGDVVEAKKLF 201
+D K G + A + +M G+ NVV + +++ G+ EA K+F
Sbjct: 468 VDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVF 519
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 79/188 (42%), Gaps = 14/188 (7%)
Query: 32 QIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVL----SPTTFLWNTLIKSH 87
H +++RG + N + S+ I ++ + S VL +P + TLI
Sbjct: 238 DFHRLVMERGFRV-GIVSCNKVLKGLSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGF 296
Query: 88 CQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDV 147
C+ F M+ G PD Y +I G + AL G++ DV
Sbjct: 297 CKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDV 356
Query: 148 FVGTSLIDMYGKCGEIGDARKVFDRMSGR----NVVSWTAMVVGYVAAGDVVEAKKLFD- 202
V +S ID+Y K G++ A V+ RM + NVV++T ++ G G + EA ++
Sbjct: 357 VVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQ 416
Query: 203 ----GMPP 206
GM P
Sbjct: 417 ILKRGMEP 424
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 72/154 (46%), Gaps = 10/154 (6%)
Query: 59 LSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLV 118
L + +S + + + ++N+LI C+ + F L F M G PD T+ V
Sbjct: 478 LHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTV 537
Query: 119 IKAC---SAMCRGLE---GKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDR 172
++ A C+ ++ G + R + D+ V +I + KC I DA K F+
Sbjct: 538 MRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNN 597
Query: 173 M-SGR---NVVSWTAMVVGYVAAGDVVEAKKLFD 202
+ G+ ++V++ M+ GY + + EA+++F+
Sbjct: 598 LIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFE 631
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 78/187 (41%), Gaps = 10/187 (5%)
Query: 24 CKRTEHLQ--QIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSP----TT 77
CKR E + + + QRG+E D S I + +FS+ L
Sbjct: 297 CKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDV 356
Query: 78 FLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGS 137
++++ I + ++ + RM G P+ TY ++IK R E ++G
Sbjct: 357 VVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQ 416
Query: 138 ALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGR----NVVSWTAMVVGYVAAGD 193
L+ G+E + +SLID + KCG + +++ M +VV + +V G G
Sbjct: 417 ILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGL 476
Query: 194 VVEAKKL 200
++ A +
Sbjct: 477 MLHAMRF 483
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 74/172 (43%), Gaps = 8/172 (4%)
Query: 38 IQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVL----SPTTFLWNTLIKSHCQNSYF 93
+ +G++ D + S+ I + +A ++ V+ R+L SP + LIK CQ+
Sbjct: 348 LHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRI 407
Query: 94 PATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVGTSL 153
+ ++ G P TY +I G +++ ++ G DV + L
Sbjct: 408 YEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVL 467
Query: 154 IDMYGKCGEIGDARKVFDRMSGR----NVVSWTAMVVGYVAAGDVVEAKKLF 201
+D K G + A + +M G+ NVV + +++ G+ EA K+F
Sbjct: 468 VDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVF 519
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 65/139 (46%), Gaps = 4/139 (2%)
Query: 70 SRVLSPTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGL 129
R +S + +LIK +C+ F +K V D + Y +++ +
Sbjct: 289 ERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIR 348
Query: 130 EGKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVV----SWTAMV 185
+ VH + + G+ + + SLI+ Y K G++ +A ++F RM+ ++ ++ +V
Sbjct: 349 DAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLV 408
Query: 186 VGYVAAGDVVEAKKLFDGM 204
GY AG V EA KL D M
Sbjct: 409 DGYCRAGYVDEALKLCDQM 427
Score = 53.5 bits (127), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 83/181 (45%), Gaps = 8/181 (4%)
Query: 32 QIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRV----LSPTTFLWNTLIKSH 87
++H +I+ G+ + + ++ I+ + + +FSR+ L P +NTL+ +
Sbjct: 352 RVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGY 411
Query: 88 CQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDV 147
C+ Y L +M VP TY +++K S + + S+ L+ G+ D
Sbjct: 412 CRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADE 471
Query: 148 FVGTSLIDMYGKCGEIGDARKVFDRMSGR----NVVSWTAMVVGYVAAGDVVEAKKLFDG 203
++L++ K G+ +A K+++ + R + ++ M+ G V EAK++ D
Sbjct: 472 ISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDN 531
Query: 204 M 204
+
Sbjct: 532 V 532
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 64/139 (46%), Gaps = 4/139 (2%)
Query: 70 SRVLSPTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGL 129
R L+P + ++TLI S + F + LS +M+ + D Y +I+ +C
Sbjct: 183 QRALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYS 242
Query: 130 EGKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGR----NVVSWTAMV 185
+ S+ R G+ D+ S+I++YGK +AR + M+ N VS++ ++
Sbjct: 243 KAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLL 302
Query: 186 VGYVAAGDVVEAKKLFDGM 204
YV +EA +F M
Sbjct: 303 SVYVENHKFLEALSVFAEM 321
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 61/138 (44%), Gaps = 10/138 (7%)
Query: 74 SPTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRG---LE 130
P +N LI C+NS F +M G PD+YTY +I + C+G
Sbjct: 283 KPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLI---AGYCKGGMVQL 339
Query: 131 GKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGR----NVVSWTAMVV 186
+ + G A+ G D F SLID GE A +F+ G+ NV+ + ++
Sbjct: 340 AERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIK 399
Query: 187 GYVAAGDVVEAKKLFDGM 204
G G ++EA +L + M
Sbjct: 400 GLSNQGMILEAAQLANEM 417
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 79/182 (43%), Gaps = 12/182 (6%)
Query: 33 IHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRVLSP----TTFLWNTLIKSHC 88
I+ + Q+G + D F + S + L + R++ +T + LI +C
Sbjct: 421 IYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYC 480
Query: 89 QNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVF 148
+ F M + G P+ TY ++I A + E + + + G++ D +
Sbjct: 481 KEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSY 540
Query: 149 VGTSLIDMYGKC--GEIGDARKVFDRMS----GRNVVSWTAMVVGYVAAGDVVEAKKLFD 202
TSLI +G+C + +A ++F M +N V++T M+ G AG EA L+D
Sbjct: 541 TYTSLI--HGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYD 598
Query: 203 GM 204
M
Sbjct: 599 EM 600
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 68/146 (46%), Gaps = 9/146 (6%)
Query: 70 SRVLSPTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGL 129
S+ ++ T ++NTLI +C+ + M+ G D +T + + + R
Sbjct: 392 SKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYD 451
Query: 130 EGKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGR----NVVSWTAMV 185
E K + G++ T+LID+Y K G + +A+++F MS + N +++ M+
Sbjct: 452 EAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMI 511
Query: 186 VGYVAAGDVVEAKKL-----FDGMPP 206
Y G + EA+KL +GM P
Sbjct: 512 YAYCKQGKIKEARKLRANMEANGMDP 537
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 54/121 (44%), Gaps = 4/121 (3%)
Query: 88 CQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDV 147
C + S M G +PDT TY V+ + + R GL DV
Sbjct: 459 CSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADV 518
Query: 148 FVGTSLIDMYGKCGEIGDARKVFDRMSG----RNVVSWTAMVVGYVAAGDVVEAKKLFDG 203
+ T ++D + K G I ARK F+ M NVV++TA++ Y+ A V A +LF+
Sbjct: 519 YTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFET 578
Query: 204 M 204
M
Sbjct: 579 M 579
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 65/137 (47%), Gaps = 10/137 (7%)
Query: 75 PTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKA-CSAMCRGL--EG 131
P T ++ ++ C S F MK G V D YTY +++ + C A GL +
Sbjct: 481 PDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKA---GLIEQA 537
Query: 132 KSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGR----NVVSWTAMVVG 187
+ G +V T+LI Y K ++ A ++F+ M N+V+++A++ G
Sbjct: 538 RKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDG 597
Query: 188 YVAAGDVVEAKKLFDGM 204
+ AG V +A ++F+ M
Sbjct: 598 HCKAGQVEKACQIFERM 614
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 63/143 (44%), Gaps = 5/143 (3%)
Query: 67 TVFSRV-LSPTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAM 125
+V RV + P T+ +N L C +S F +M+ G PD TY ++ +
Sbjct: 225 SVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRR 284
Query: 126 CRGLEGKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNV----VSW 181
R E ++ R + D+ TSLI K G + +A + F RM R + +S+
Sbjct: 285 GRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSY 344
Query: 182 TAMVVGYVAAGDVVEAKKLFDGM 204
++ Y G + ++KKL M
Sbjct: 345 NTLIYAYCKEGMMQQSKKLLHEM 367
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 89/199 (44%), Gaps = 13/199 (6%)
Query: 18 ATLLKA-CKRTEH--LQQIHACIIQRGLEQD----QFLISNFISLAHSLSTIAYSTTVFS 70
A L++A CK E+ ++ + +RG + D LI + H + +
Sbjct: 384 APLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLID 443
Query: 71 RVLSPTTFLWNTLIKSHCQNSYF-PATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGL 129
R +SP ++N L+ C+ F PA L F+ M +PD Y Y +I
Sbjct: 444 RGVSPDAAIYNMLMSGLCKTGRFLPAKL-LFSEMLDRNILPDAYVYATLIDGFIRSGDFD 502
Query: 130 EGKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGRNVV----SWTAMV 185
E + V ++ G++ DV ++I + + G + +A +RM+ ++V +++ ++
Sbjct: 503 EARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTII 562
Query: 186 VGYVAAGDVVEAKKLFDGM 204
GYV D+ A K+F M
Sbjct: 563 DGYVKQQDMATAIKIFRYM 581
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 63/139 (45%), Gaps = 5/139 (3%)
Query: 70 SRVLSPTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGL 129
SR + + + LI+ + + + F RM+ G VPD + +VI S R
Sbjct: 179 SRNVEISIETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRAS 238
Query: 130 EGKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMS----GRNVVSWTAMV 185
E +S S L+ E DV V T+L+ + + GEI +A KVF M NV +++ ++
Sbjct: 239 EAQSFFDS-LKDRFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVI 297
Query: 186 VGYVAAGDVVEAKKLFDGM 204
G + A +F M
Sbjct: 298 DALCRCGQISRAHDVFADM 316
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/136 (22%), Positives = 65/136 (47%), Gaps = 4/136 (2%)
Query: 73 LSPTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGK 132
+ P ++NT+I + C L+ F M G P+ TY +I+ R +
Sbjct: 252 IEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDAS 311
Query: 133 SVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGR----NVVSWTAMVVGY 188
+ + + +V ++LID + K G++ +A K++D M R ++ ++++++ G+
Sbjct: 312 RLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 371
Query: 189 VAAGDVVEAKKLFDGM 204
+ EAK +F+ M
Sbjct: 372 CMHDRLDEAKHMFELM 387
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 61/133 (45%), Gaps = 4/133 (3%)
Query: 73 LSPTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGK 132
LSP ++T++ C++ L M G PDT TY +I+ R E
Sbjct: 446 LSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEAC 505
Query: 133 SVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGR----NVVSWTAMVVGY 188
++ LR GL D F T+LI+ Y G++ A ++ + M + +VV+++ ++ G
Sbjct: 506 DLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGL 565
Query: 189 VAAGDVVEAKKLF 201
EAK+L
Sbjct: 566 NKQSRTREAKRLL 578
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 72/162 (44%), Gaps = 13/162 (8%)
Query: 58 SLSTIAYSTTVFSRVL----SPTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTY 113
S I+++ VF +L SP F +N LI+ C L+ F +M+ G +P+
Sbjct: 182 SKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVV 241
Query: 114 TYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRM 173
TY +I + + +G + S GLE ++ +I+ + G + + V M
Sbjct: 242 TYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEM 301
Query: 174 SGR----NVVSWTAMVVGYVAAGD-----VVEAKKLFDGMPP 206
+ R + V++ ++ GY G+ V+ A+ L G+ P
Sbjct: 302 NRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTP 343
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/194 (21%), Positives = 84/194 (43%), Gaps = 11/194 (5%)
Query: 19 TLLKACKRT---EHLQQIHACIIQRGLEQDQFLISNFISLAHSLSTIAYSTTVFSRV--- 72
+LL C R E + + + R +EQD F + + + + + +++
Sbjct: 344 SLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVK 403
Query: 73 -LSPTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEG 131
+ P ++T+I + F L+ F M+ G D +Y ++ + + R E
Sbjct: 404 RIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEA 463
Query: 132 KSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGR----NVVSWTAMVVG 187
+ G+++DV +L+ YGK G+ + +KVF M N+++++ ++ G
Sbjct: 464 LDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDG 523
Query: 188 YVAAGDVVEAKKLF 201
Y G EA ++F
Sbjct: 524 YSKGGLYKEAMEIF 537
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 61/136 (44%), Gaps = 4/136 (2%)
Query: 73 LSPTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGK 132
SP +N L+ ++ + F M +G PD+YTY +++ + L
Sbjct: 250 FSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAAL 309
Query: 133 SVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGR----NVVSWTAMVVGY 188
+ G++ V T+LID + G + + D M +VV +T M+ GY
Sbjct: 310 TTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGY 369
Query: 189 VAAGDVVEAKKLFDGM 204
V +G++ +AK++F M
Sbjct: 370 VVSGELDKAKEMFREM 385
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 71/172 (41%), Gaps = 40/172 (23%)
Query: 73 LSPTTFLWNTLIKSHCQNS-YFPATLSAFARMKANGSVPDTYTY---------------- 115
L PT N LIK+ C+N A L F M G PD+YTY
Sbjct: 152 LPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEA 211
Query: 116 -----PLVIKAC-------SAMCRGLEGKSVHGSALRC-------GLEEDVFVGTSLIDM 156
+V K C +++ GL G A+R G+E +VF +SL+D
Sbjct: 212 KKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDG 271
Query: 157 YGKCGEIGDARKVFDRMSGR----NVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
K G A ++F+ M R N+V++T ++ G + EA +L D M
Sbjct: 272 LCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRM 323
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 58/141 (41%), Gaps = 4/141 (2%)
Query: 68 VFSRVLSPTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCR 127
+ R +SP ++ LI S + M G P+T TY +I R
Sbjct: 324 MIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENR 383
Query: 128 GLEGKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGR----NVVSWTA 183
E + + G + D+ LI+ Y K I D ++F MS R N V++
Sbjct: 384 LEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNT 443
Query: 184 MVVGYVAAGDVVEAKKLFDGM 204
+V G+ +G + AKKLF M
Sbjct: 444 LVQGFCQSGKLEVAKKLFQEM 464
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 74/169 (43%), Gaps = 9/169 (5%)
Query: 45 DQFLISNFISLAHSLSTIAYSTTVFS-----RVLSPTTFLWNTLIKSHCQNSYFPATLSA 99
D +++ F+S+ S ++ + +F V T++ +N+++ S + YF
Sbjct: 593 DVDMMNTFLSIYLSKGDLSLACKLFEIFNGMGVTDLTSYTYNSMMSSFVKKGYFQTARGV 652
Query: 100 FARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVGTSLIDMYGK 159
+M N D TY ++I+ M R +V + G D+ + +LI+ GK
Sbjct: 653 LDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRLTKQGGYLDIVMYNTLINALGK 712
Query: 160 CGEIGDARKVFDRMSGR----NVVSWTAMVVGYVAAGDVVEAKKLFDGM 204
+ +A ++FD M +VVS+ M+ AG + EA K M
Sbjct: 713 ATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAM 761
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 68/164 (41%), Gaps = 24/164 (14%)
Query: 48 LISNFISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQNSYFPATLSAFARMKANG 107
+I S + ++ + + R ++P F +NTLI + C+ F M+ G
Sbjct: 306 IIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGG 365
Query: 108 SVPDTYTYPLVIKACSAMCRGLEGKSVHGSALRCG----------LEEDVFVGTSLIDMY 157
PD +Y ++I +G +HG R L +V + +ID Y
Sbjct: 366 VAPDQISYKVII----------QGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGY 415
Query: 158 GKCGEIGDARKVFDRMSGR----NVVSWTAMVVGYVAAGDVVEA 197
G+ G+ A V + M NV + A++ GYV G +++A
Sbjct: 416 GRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDA 459
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 64/134 (47%), Gaps = 4/134 (2%)
Query: 75 PTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSV 134
P ++NT+I C+ + F RM+ +G D TY ++ R + +
Sbjct: 172 PDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARL 231
Query: 135 HGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGR----NVVSWTAMVVGYVA 190
+ + +V T++ID++ K G+ +A K+++ M+ R +V ++ +++ G
Sbjct: 232 MRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCM 291
Query: 191 AGDVVEAKKLFDGM 204
G V EAK++ D M
Sbjct: 292 HGRVDEAKQMLDLM 305
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 57/135 (42%), Gaps = 1/135 (0%)
Query: 71 RVLSPTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLE 130
R + P F +N+LI C + M G +PD TY +I R E
Sbjct: 273 RCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDE 332
Query: 131 GKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGR-NVVSWTAMVVGYV 189
G + + GL D ++I Y + G A+++F RM R N+ +++ ++ G
Sbjct: 333 GTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLC 392
Query: 190 AAGDVVEAKKLFDGM 204
V +A LF+ M
Sbjct: 393 MNWRVEKALVLFENM 407
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 63/156 (40%), Gaps = 13/156 (8%)
Query: 53 ISLAHSLSTIAYSTTVFSRVLSPTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDT 112
ISL H + ++S +N +I C+ S F LS +M G PD
Sbjct: 89 ISLFHHMEVCGIGHDLYS---------YNIVINCLCRCSRFVIALSVVGKMMKFGYEPDV 139
Query: 113 YTYPLVIKACSAMCRGLEGKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDR 172
T +I R + + G DV + ++ID K G + DA ++FDR
Sbjct: 140 VTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDR 199
Query: 173 MSGRNV----VSWTAMVVGYVAAGDVVEAKKLFDGM 204
M V V++ ++V G +G +A +L M
Sbjct: 200 MERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDM 235
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 59/131 (45%), Gaps = 5/131 (3%)
Query: 79 LWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACSAMCRGLEGKSVHGSA 138
++NT+I C+ + F +M+ G PD +TY +I R + +
Sbjct: 252 IYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDM 311
Query: 139 LRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGR-----NVVSWTAMVVGYVAAGD 193
L + D+ +LID + K G++ +A K++D M +VV++ ++ G+
Sbjct: 312 LEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKR 371
Query: 194 VVEAKKLFDGM 204
V E ++F M
Sbjct: 372 VEEGMEVFREM 382
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 56/142 (39%), Gaps = 4/142 (2%)
Query: 64 YSTTVFSRVLSPTTFLWNTLIKSHCQNSYFPATLSAFARMKANGSVPDTYTYPLVIKACS 123
Y V S+ P +NTLIK C+ + F M G V +T TY +I
Sbjct: 343 YDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFF 402
Query: 124 AMCRGLEGKSVHGSALRCGLEEDVFVGTSLIDMYGKCGEIGDARKVFDRMSGR----NVV 179
+ V + G+ D+ L+D G + A VF+ M R ++V
Sbjct: 403 QARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIV 462
Query: 180 SWTAMVVGYVAAGDVVEAKKLF 201
++T M+ AG V + LF
Sbjct: 463 TYTTMIEALCKAGKVEDGWDLF 484