Miyakogusa Predicted Gene

Lj1g3v4717450.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4717450.1 gi|3695058|gb|AF064787.1|.path1.1
         (493 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G22400.1 | Symbols:  | Rho GTPase activating protein with PAK...   418   e-117
AT3G11490.1 | Symbols:  | rac GTPase activating protein | chr3:3...   394   e-110
AT2G46710.1 | Symbols:  | Rho GTPase activating protein with PAK...   359   2e-99
AT4G03100.1 | Symbols:  | Rho GTPase activating protein with PAK...   357   1e-98
AT1G08340.1 | Symbols:  | Rho GTPase activating protein with PAK...   347   1e-95

>AT5G22400.1 | Symbols:  | Rho GTPase activating protein with
           PAK-box/P21-Rho-binding domain | chr5:7423050-7425335
           REVERSE LENGTH=466
          Length = 466

 Score =  418 bits (1075), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 232/434 (53%), Positives = 280/434 (64%), Gaps = 55/434 (12%)

Query: 61  QLSLLTLLIATFRKSLIGSCSTSPRDSGALSSSSMEIGWPSNVRHVAHVTFDRFHGFLGL 120
           Q+SLL LL+A FR+SLI SC ++ R+       SMEIGWP+NVRHVAHVTFDRF+GFLGL
Sbjct: 87  QISLLALLVAIFRRSLI-SCKSNRREL-----CSMEIGWPTNVRHVAHVTFDRFNGFLGL 140

Query: 121 XXXXXXXXXXXXXSASTSVFGVSTESMQLSFDARGNSVPTILLLMQRHLYARGGLQAEGI 180
                        SAS +VFGVSTESMQLS+D+RGN VPTILLLMQ  LY++GGLQAEGI
Sbjct: 141 PVEFEPEVPRRAPSASATVFGVSTESMQLSYDSRGNCVPTILLLMQNCLYSQGGLQAEGI 200

Query: 181 FRINAENSQEELVREQLNRGVVPNGVDVHCLAGLIKAWFRELPTGILDPLSPEEVMQSQS 240
           FR+ AENS+EE VREQLNRG +P  +DVHCLAGLIKAWFRELPT +LD LSPE+VMQ Q+
Sbjct: 201 FRLTAENSEEEAVREQLNRGFIPERIDVHCLAGLIKAWFRELPTSVLDSLSPEQVMQCQT 260

Query: 241 EEECDQLVRLLPPTEAALLDWAINLMADVAQMEHFNKMNARNIAMVFAPNMTHMADPLTA 300
           EEE  +LVRLLPPTEAALLDWAINLMADV Q EH NKMN+RNIAMVFAPNMT M DPLTA
Sbjct: 261 EEENVELVRLLPPTEAALLDWAINLMADVVQYEHLNKMNSRNIAMVFAPNMTQMDDPLTA 320

Query: 301 LMYAVQVMSFLKTLVVKTLREREESIVKSNPVPNLNSFDDDGHQSDSQVLPKDGSENGND 360
           LMYAVQVM+FLKTL+ KTLRER++S+V+      L   D+ GHQS SQ L          
Sbjct: 321 LMYAVQVMNFLKTLIEKTLRERQDSVVEQAHAFPLEPSDESGHQSPSQSL---------- 370

Query: 361 CSDEDTVFVSAEPSQPSPTHHTEDGCETESGSETSPTPAENFLSSGSRLLIDSCPCNVVS 420
                  F ++E S+ + + + E+     S SE S             L +++  C    
Sbjct: 371 ------AFNTSEQSEETQSDNIENAENQSSSSEIS-----------DELTLENNAC---- 409

Query: 421 QLCSFAIGLQDSSIATGQAKISR-SKSLQMSTSDIDKSFKNVIEFPVVGPAEKNRGTAII 479
                    +      G+ +  R S S Q    ++D         P   P  + +G   +
Sbjct: 410 ---------EQRETDFGKYRTGRLSDSSQQVVLNLDP--------PAQWPVGRTKGLTNL 452

Query: 480 GRINSRTELTEAWR 493
            R+ SR E TEAWR
Sbjct: 453 SRVGSRVERTEAWR 466


>AT3G11490.1 | Symbols:  | rac GTPase activating protein |
           chr3:3617523-3619567 REVERSE LENGTH=435
          Length = 435

 Score =  394 bits (1013), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 218/431 (50%), Positives = 268/431 (62%), Gaps = 60/431 (13%)

Query: 63  SLLTLLIATFRKSLIGSCSTSPRDSGALSSSSMEIGWPSNVRHVAHVTFDRFHGFLGLXX 122
           S L +L++  R+S+IG C       G     SMEIG P++VRHVAHVTFDRFHGFLGL  
Sbjct: 65  SALEILVSAIRRSVIGGCV------GEEDLCSMEIGVPTDVRHVAHVTFDRFHGFLGLPV 118

Query: 123 XXXXXXXXXXXSASTSVFGVSTESMQLSFDARGNSVPTILLLMQRHLYARGGLQAEGIFR 182
                      SAS +VFGVSTESMQLS+D RGN VPTILL+MQ HLY+RGGL+ EGIFR
Sbjct: 119 EFEPEVPRRAPSASATVFGVSTESMQLSYDTRGNIVPTILLMMQSHLYSRGGLRVEGIFR 178

Query: 183 INAENSQEELVREQLNRGVVPNGVDVHCLAGLIKAWFRELPTGILDPLSPEEVMQSQSEE 242
           IN EN QEE +RE+LN+G++P+ +DVHCLA LIKAWFRELP+G+LD LSPE+VM+S+SE+
Sbjct: 179 INGENGQEEYIREELNKGIIPDNIDVHCLASLIKAWFRELPSGVLDSLSPEQVMESESED 238

Query: 243 ECDQLVRLLPPTEAALLDWAINLMADVAQMEHFNKMNARNIAMVFAPNMTHMADPLTALM 302
           EC +LVRLLP TEA+LLDWAINLMADV +ME  NKMNARNIAMVFAPNMT M DPLTALM
Sbjct: 239 ECVELVRLLPSTEASLLDWAINLMADVVEMEQLNKMNARNIAMVFAPNMTQMLDPLTALM 298

Query: 303 YAVQVMSFLKTLVVKTLREREESIVKSNPVPNLNSFDDDGHQSDSQVLPKDGSENGNDCS 362
           YAVQVM+FLKTL+VKTL++R+ES  K  P  N +  D +G QS S+ L      N  +  
Sbjct: 299 YAVQVMNFLKTLIVKTLKDRKESRDKLVPASNPSPRDHNGDQSSSRQLLHLMKANKEE-- 356

Query: 363 DEDTVFVSAEPSQPSPTHHTEDGCETESGSETSPTPAENFLSSGSRLLIDSCPCNVVSQL 422
                              T D  E E   +      E    + S  L+D    ++V+  
Sbjct: 357 -------------------TLDNFEAEMKDKEESADEEEEECAESVELVDIKKSSLVN-- 395

Query: 423 CSFAIGLQDSSIATGQAKISRSKSLQMSTSDIDKSFKNVIEFPVVGPAEKNRGTAIIGRI 482
                   +SS   GQ  I   +   MS                       + ++I+GR+
Sbjct: 396 --------NSSGGFGQKHIGWEEQRTMS-----------------------KASSIVGRV 424

Query: 483 NSRTELTEAWR 493
           N R EL EAWR
Sbjct: 425 NYRVELFEAWR 435


>AT2G46710.1 | Symbols:  | Rho GTPase activating protein with
           PAK-box/P21-Rho-binding domain | chr2:19192105-19194656
           FORWARD LENGTH=455
          Length = 455

 Score =  359 bits (922), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 172/269 (63%), Positives = 211/269 (78%), Gaps = 2/269 (0%)

Query: 61  QLSLLTLLIATFRKSLIGSCSTSPRDSGALSSSSMEIGWPSNVRHVAHVTFDRFHGFLGL 120
           QL+++ LL A  RKSL+ SC+    +   ++S  M+IGWP+ V+HV+HVTFDRF+GFLGL
Sbjct: 71  QLTVVDLLAAVLRKSLVMSCAMERGEDDVVAS--MDIGWPTEVKHVSHVTFDRFNGFLGL 128

Query: 121 XXXXXXXXXXXXXSASTSVFGVSTESMQLSFDARGNSVPTILLLMQRHLYARGGLQAEGI 180
                        SAS SVFGVS +SMQ S+D RGNSVPTILL MQ+ LY  GGL+AEGI
Sbjct: 129 PSELEPEVPPRAPSASVSVFGVSAKSMQCSYDDRGNSVPTILLRMQKRLYTEGGLKAEGI 188

Query: 181 FRINAENSQEELVREQLNRGVVPNGVDVHCLAGLIKAWFRELPTGILDPLSPEEVMQSQS 240
           FRIN +N +EE VR QLN GVVP G+DVHCLAGLIKAWFRELPTG+LD L+PE+VM+  +
Sbjct: 189 FRINPDNGKEEHVRRQLNCGVVPRGIDVHCLAGLIKAWFRELPTGVLDVLTPEQVMRCNT 248

Query: 241 EEECDQLVRLLPPTEAALLDWAINLMADVAQMEHFNKMNARNIAMVFAPNMTHMADPLTA 300
           EE+C +LV LLPP E+A+LDWAI LMADV + E FNKMNARN+AMVFAPNMT MADPLTA
Sbjct: 249 EEDCSRLVILLPPVESAILDWAIGLMADVVEHEQFNKMNARNVAMVFAPNMTQMADPLTA 308

Query: 301 LMYAVQVMSFLKTLVVKTLREREESIVKS 329
           L++AVQVM+FLKTL++  L+ERE +  K+
Sbjct: 309 LIHAVQVMNFLKTLILMNLKERENADAKA 337


>AT4G03100.1 | Symbols:  | Rho GTPase activating protein with
           PAK-box/P21-Rho-binding domain | chr4:1374361-1375913
           FORWARD LENGTH=430
          Length = 430

 Score =  357 bits (916), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 176/275 (64%), Positives = 209/275 (76%), Gaps = 8/275 (2%)

Query: 62  LSLLTLLIATFRKSLIGSCSTSPRD-----SGALSSS--SMEIGWPSNVRHVAHVTFDRF 114
           LSL+  L+   RKS++ SC    R       G +SS+   MEIGWP+NVRH+ HVTFDRF
Sbjct: 39  LSLVEFLLTALRKSVV-SCRVDNRQDDGGVGGGISSAVHHMEIGWPTNVRHITHVTFDRF 97

Query: 115 HGFLGLXXXXXXXXXXXXXSASTSVFGVSTESMQLSFDARGNSVPTILLLMQRHLYARGG 174
           HGFLGL             SAS SVFGVS ESMQ S+D +GNSVPTILLLMQ  LY++ G
Sbjct: 98  HGFLGLPHELQVEIPCRVPSASVSVFGVSAESMQCSYDEKGNSVPTILLLMQERLYSQQG 157

Query: 175 LQAEGIFRINAENSQEELVREQLNRGVVPNGVDVHCLAGLIKAWFRELPTGILDPLSPEE 234
           L+AEGIFRIN ENSQEE VR+QLNRG+VP  +DVHCLAGLIKAWFRELP+G+LD LSPEE
Sbjct: 158 LKAEGIFRINPENSQEEHVRDQLNRGIVPENIDVHCLAGLIKAWFRELPSGVLDGLSPEE 217

Query: 235 VMQSQSEEECDQLVRLLPPTEAALLDWAINLMADVAQMEHFNKMNARNIAMVFAPNMTHM 294
           V+   +E+E  +L++ L PTE+ALL+WA++LMADV + E  NKMNARNIAMVFAPNMT M
Sbjct: 218 VLNCNTEDESVELIKQLKPTESALLNWAVDLMADVVEEEESNKMNARNIAMVFAPNMTQM 277

Query: 295 ADPLTALMYAVQVMSFLKTLVVKTLREREESIVKS 329
            DPLTALM+AVQVM+ LKTL+ KTL EREE+   S
Sbjct: 278 TDPLTALMHAVQVMNLLKTLITKTLAEREENATGS 312


>AT1G08340.1 | Symbols:  | Rho GTPase activating protein with
           PAK-box/P21-Rho-binding domain | chr1:2631308-2632669
           FORWARD LENGTH=331
          Length = 331

 Score =  347 bits (889), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 161/231 (69%), Positives = 191/231 (82%)

Query: 95  MEIGWPSNVRHVAHVTFDRFHGFLGLXXXXXXXXXXXXXSASTSVFGVSTESMQLSFDAR 154
           M+IG P+N+RHVAHVTFDRF GFLGL             SAS +VFGVSTESMQLS+D+R
Sbjct: 1   MDIGGPTNIRHVAHVTFDRFDGFLGLPSEFEPDVPRKAPSASATVFGVSTESMQLSYDSR 60

Query: 155 GNSVPTILLLMQRHLYARGGLQAEGIFRINAENSQEELVREQLNRGVVPNGVDVHCLAGL 214
           GN VP ILLL+Q  LY +GGLQAEG+FRI  ENS+EE VREQLN+G++P+G+DVHCLAGL
Sbjct: 61  GNCVPVILLLLQSRLYDQGGLQAEGVFRITGENSEEEFVREQLNKGIIPDGIDVHCLAGL 120

Query: 215 IKAWFRELPTGILDPLSPEEVMQSQSEEECDQLVRLLPPTEAALLDWAINLMADVAQMEH 274
           IKAWFRELP G+LDPL  E+VMQ +S+E+  ++VRLLP TEA+LL+WAINLMADV Q EH
Sbjct: 121 IKAWFRELPRGVLDPLPSEQVMQCESDEDFVKVVRLLPQTEASLLNWAINLMADVIQFEH 180

Query: 275 FNKMNARNIAMVFAPNMTHMADPLTALMYAVQVMSFLKTLVVKTLREREES 325
            NKMN+RN+A+VFAPNM+ MADPLTALMYAVQVM  LK+L  KT+RERE S
Sbjct: 181 VNKMNSRNLALVFAPNMSQMADPLTALMYAVQVMKLLKSLTEKTVREREAS 231