Miyakogusa Predicted Gene

Lj1g3v4717290.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4717290.1 Non Chatacterized Hit- tr|I3SBC4|I3SBC4_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,99.38,0,seg,NULL;
IRON-SULFUR CLUSTER ASSEMBLY PROTEIN,NULL; no description,FeS cluster
biogenesis; HesB-lik,CUFF.33016.1
         (161 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G03905.1 | Symbols:  | Iron-sulphur cluster biosynthesis fami...   186   4e-48
AT1G10500.1 | Symbols: ATCPISCA, CPISCA | chloroplast-localized ...    67   5e-12
AT2G16710.1 | Symbols:  | Iron-sulphur cluster biosynthesis fami...    61   3e-10
AT2G36260.1 | Symbols:  | Iron-sulphur cluster biosynthesis fami...    58   4e-09
AT2G16710.3 | Symbols:  | Iron-sulphur cluster biosynthesis fami...    56   9e-09

>AT5G03905.1 | Symbols:  | Iron-sulphur cluster biosynthesis family
           protein | chr5:1052728-1054041 FORWARD LENGTH=158
          Length = 158

 Score =  186 bits (473), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 92/158 (58%), Positives = 111/158 (70%), Gaps = 2/158 (1%)

Query: 3   TSSLFRRLAPSLAARFRQNQKLXXXXXXXXXXXXXXXXXXXXXXXHVEPVHMTENCLRRM 62
           + SL +R+AP LA R R+N +L                         + VH+++NC+RRM
Sbjct: 2   SRSLVKRVAPYLAGRIRENHRLLNFSSASAIKEASSSSSSQPESSSNDVVHLSDNCIRRM 61

Query: 63  KELEASESATAPKTLRLSVETGGCSGFQYAFDLDDRINSDDRVFEREGIKLVVDNISYDF 122
           KEL++SE     K LRL VETGGCSGFQY F+LD+R N DDRVFE+ G+KLVVDN+SYD 
Sbjct: 62  KELQSSEPEK--KMLRLGVETGGCSGFQYKFELDNRTNPDDRVFEKNGVKLVVDNVSYDL 119

Query: 123 VKGATVDYVEELIRSAFVVTENPSAVGGCSCKSSFMVK 160
           VKGAT+DY EELIR+AFVV  NPSAVGGCSCKSSFMVK
Sbjct: 120 VKGATIDYEEELIRAAFVVAVNPSAVGGCSCKSSFMVK 157


>AT1G10500.1 | Symbols: ATCPISCA, CPISCA | chloroplast-localized
           ISCA-like protein | chr1:3460160-3461340 REVERSE
           LENGTH=180
          Length = 180

 Score = 67.0 bits (162), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 36/108 (33%), Positives = 56/108 (51%), Gaps = 5/108 (4%)

Query: 52  VHMTENCLRRMKELEASESATAPKTLRLSVETGGCSGFQYAFDLDDRINS--DDRVFERE 109
           + ++EN L+ + ++ +         LR+ V+ GGCSG  Y  D ++R N+  DD   E +
Sbjct: 72  ISLSENALKHLSKMRSERGEDL--CLRIGVKQGGCSGMSYTMDFENRANARPDDSTIEYQ 129

Query: 110 GIKLVVDNISYDFVKGATVDYVEELIRSAFVVTENPSAVGGCSCKSSF 157
           G  +V D  S  F+ G  +DY + LI   F  + NP+A   C C  SF
Sbjct: 130 GFTIVCDPKSMLFLFGMQLDYSDALIGGGFSFS-NPNATQTCGCGKSF 176


>AT2G16710.1 | Symbols:  | Iron-sulphur cluster biosynthesis family
           protein | chr2:7248294-7250013 FORWARD LENGTH=137
          Length = 137

 Score = 61.2 bits (147), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 47/82 (57%), Gaps = 1/82 (1%)

Query: 77  LRLSVETGGCSGFQYAFDLDDRINSDDRVFEREGIKLVVDNISYDFVKGATVDYVEELIR 136
           LRL V+  GC+G  Y  +  D     D + E +G++++V+  +   V G  +D+V++ +R
Sbjct: 45  LRLGVKARGCNGLSYTLNYADEKGKFDELVEEKGVRILVEPKALMHVIGTKMDFVDDKLR 104

Query: 137 SAFVVTENPSAVGGCSCKSSFM 158
           S FV   NP++ G C C  SFM
Sbjct: 105 SEFVFI-NPNSQGQCGCGESFM 125


>AT2G36260.1 | Symbols:  | Iron-sulphur cluster biosynthesis family
           protein | chr2:15202786-15203500 FORWARD LENGTH=109
          Length = 109

 Score = 57.8 bits (138), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 31/81 (38%), Positives = 45/81 (55%), Gaps = 2/81 (2%)

Query: 77  LRLSVETGGCSGFQYAFDLDDRINSDDRVFEREGIKLVVDNISYDFVKGATVDYVEELIR 136
           LRL+VE  GC+G  Y  +        D V E +G+K++VD  +   V G  +D+V++ +R
Sbjct: 28  LRLAVEAKGCNGLSYVLNYAQEKGKFDEVVEEKGVKILVDPKAVMHVIGTEMDFVDDKLR 87

Query: 137 SAFVVTENPSAVGGCSCKSSF 157
           S FV   NP+A   C C  SF
Sbjct: 88  SEFVFV-NPNAT-KCGCGESF 106


>AT2G16710.3 | Symbols:  | Iron-sulphur cluster biosynthesis family
           protein | chr2:7248294-7250013 FORWARD LENGTH=143
          Length = 143

 Score = 56.2 bits (134), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 49/89 (55%), Gaps = 7/89 (7%)

Query: 77  LRLSVETGGCSGFQYAFDLDDRINSDDR------VFEREGIKLVVDNISYDFVKGATVDY 130
           LRL V+  GC+G  Y  +   + + +D       + E +G++++V+  +   V G  +D+
Sbjct: 45  LRLGVKARGCNGLSYTLNYAGKTSGNDEKGKFDELVEEKGVRILVEPKALMHVIGTKMDF 104

Query: 131 VEELIRSAFVVTENPSAVGGCSCKSSFMV 159
           V++ +RS FV   NP++ G C C  SFM 
Sbjct: 105 VDDKLRSEFVFI-NPNSQGQCGCGESFMT 132