Miyakogusa Predicted Gene

Lj1g3v4714110.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4714110.1 tr|G7L609|G7L609_MEDTR Inosine-uridine preferring
ribonucleoside hydrolase OS=Medicago truncatula
GN,87.72,0,IU_nuc_hydro,Inosine/uridine-preferring nucleoside
hydrolase domain; INOSINE-URIDINE PREFERRING NUCL,CUFF.32990.1
         (285 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G36310.1 | Symbols: URH1 | uridine-ribohydrolase 1 | chr2:152...   485   e-137
AT1G05620.2 | Symbols: URH2 | uridine-ribohydrolase  2 | chr1:16...   317   8e-87
AT1G05620.1 | Symbols: URH2 | uridine-ribohydrolase  2 | chr1:16...   317   8e-87
AT5G18890.1 | Symbols:  | Inosine-uridine preferring nucleoside ...    48   1e-05

>AT2G36310.1 | Symbols: URH1 | uridine-ribohydrolase 1 |
           chr2:15224692-15226633 REVERSE LENGTH=336
          Length = 336

 Score =  485 bits (1248), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 228/285 (80%), Positives = 262/285 (91%)

Query: 1   MAIMMAFQTPEVDVLGLTSIFGNAATEDATRNALLLCEIAGREDVPVAEGSHEPLKGGRP 60
           MAI+MAFQTPE+++LGLT++FGN +T+DATRNALLLCEIAG  DVPVAEGS EPLKGG P
Sbjct: 36  MAILMAFQTPELEILGLTTVFGNVSTQDATRNALLLCEIAGFPDVPVAEGSSEPLKGGIP 95

Query: 61  RVADFVHGKDGLGNLFLPDPKTKKIEKSASEFLVDKVSEFPGEVTVLALGPLTNVALAVK 120
           RVADFVHGK+GLG++ LP P  KK EKSA+EFL +KV E+PGEVT+LALGPLTN+ALA+K
Sbjct: 96  RVADFVHGKNGLGDVSLPPPSRKKSEKSAAEFLDEKVEEYPGEVTILALGPLTNLALAIK 155

Query: 121 RDSSFASKVKRIVVLGGSFFALGNVNPAAEANIYGDPEAADVVFTSGANIVVVGINITTQ 180
           RDSSFASKVK+IV+LGG+FF+LGNVNPAAEANIYGDPEAADVVFTSGA+I VVGINITTQ
Sbjct: 156 RDSSFASKVKKIVILGGAFFSLGNVNPAAEANIYGDPEAADVVFTSGADITVVGINITTQ 215

Query: 181 VTLTDADLLKLKESKGKHASLLSDMCKFYRDWHVKSDGLHGIFLHDPVSFVAGVRPELFT 240
           + L+D DLL+L   KGKH+ L+SDMCKFYRDWHVKSDG++G++LHDPVSFVA VRP+LFT
Sbjct: 216 LKLSDDDLLELGNCKGKHSKLISDMCKFYRDWHVKSDGVYGVYLHDPVSFVAVVRPDLFT 275

Query: 241 YKKGVVRVETQGICVGHTLMDQGLKKWNTSNPWTDYSPVSVAWTV 285
           YKKGVVRVETQGICVGHTLMDQGLK+WN SNPW  YSP+SVAWTV
Sbjct: 276 YKKGVVRVETQGICVGHTLMDQGLKRWNGSNPWVGYSPISVAWTV 320


>AT1G05620.2 | Symbols: URH2 | uridine-ribohydrolase  2 |
           chr1:1679609-1681527 FORWARD LENGTH=302
          Length = 302

 Score =  317 bits (811), Expect = 8e-87,   Method: Compositional matrix adjust.
 Identities = 160/286 (55%), Positives = 203/286 (70%), Gaps = 1/286 (0%)

Query: 1   MAIMMAFQTPEVDVLGLTSIFGNAATEDATRNALLLCEIAGREDVPVAEGSHEP-LKGGR 59
           MAI +A  +PEVDV+GLT+IFGN  T  ATRNAL L E+AGR D+PVAEG+H+  L   +
Sbjct: 1   MAIFVALNSPEVDVIGLTTIFGNVYTTLATRNALHLLEVAGRTDIPVAEGTHKTFLNDTK 60

Query: 60  PRVADFVHGKDGLGNLFLPDPKTKKIEKSASEFLVDKVSEFPGEVTVLALGPLTNVALAV 119
            R+ADFVHGKDGLGN   P PK K IEKS  EFLV++    PGE+TV+ALGPLTN+ALAV
Sbjct: 61  LRIADFVHGKDGLGNQNFPPPKGKPIEKSGPEFLVEQAKLCPGEITVVALGPLTNLALAV 120

Query: 120 KRDSSFASKVKRIVVLGGSFFALGNVNPAAEANIYGDPEAADVVFTSGANIVVVGINITT 179
           + D  F+  V +IV+LGG+F   GNVNPA+EANI+GDPEAAD+VFT GA+I+ VGIN+T 
Sbjct: 121 QLDPEFSKNVGQIVLLGGAFAVNGNVNPASEANIFGDPEAADIVFTCGADIIAVGINVTH 180

Query: 180 QVTLTDADLLKLKESKGKHASLLSDMCKFYRDWHVKSDGLHGIFLHDPVSFVAGVRPELF 239
           QV +T  D  KL  SKGK A  L  +   Y D+H+ +  + G++LHDP + +A   P LF
Sbjct: 181 QVIMTADDKDKLASSKGKLAQYLCKILDVYYDYHLTAYEIKGVYLHDPATILAAFLPSLF 240

Query: 240 TYKKGVVRVETQGICVGHTLMDQGLKKWNTSNPWTDYSPVSVAWTV 285
           TY +GV RV+T GI  G TL+   LK++  +N W+D   V VA TV
Sbjct: 241 TYTEGVARVQTSGITRGLTLLYNNLKRFEEANEWSDKPTVKVAVTV 286


>AT1G05620.1 | Symbols: URH2 | uridine-ribohydrolase  2 |
           chr1:1679286-1681527 FORWARD LENGTH=322
          Length = 322

 Score =  317 bits (811), Expect = 8e-87,   Method: Compositional matrix adjust.
 Identities = 160/286 (55%), Positives = 203/286 (70%), Gaps = 1/286 (0%)

Query: 1   MAIMMAFQTPEVDVLGLTSIFGNAATEDATRNALLLCEIAGREDVPVAEGSHEP-LKGGR 59
           MAI +A  +PEVDV+GLT+IFGN  T  ATRNAL L E+AGR D+PVAEG+H+  L   +
Sbjct: 21  MAIFVALNSPEVDVIGLTTIFGNVYTTLATRNALHLLEVAGRTDIPVAEGTHKTFLNDTK 80

Query: 60  PRVADFVHGKDGLGNLFLPDPKTKKIEKSASEFLVDKVSEFPGEVTVLALGPLTNVALAV 119
            R+ADFVHGKDGLGN   P PK K IEKS  EFLV++    PGE+TV+ALGPLTN+ALAV
Sbjct: 81  LRIADFVHGKDGLGNQNFPPPKGKPIEKSGPEFLVEQAKLCPGEITVVALGPLTNLALAV 140

Query: 120 KRDSSFASKVKRIVVLGGSFFALGNVNPAAEANIYGDPEAADVVFTSGANIVVVGINITT 179
           + D  F+  V +IV+LGG+F   GNVNPA+EANI+GDPEAAD+VFT GA+I+ VGIN+T 
Sbjct: 141 QLDPEFSKNVGQIVLLGGAFAVNGNVNPASEANIFGDPEAADIVFTCGADIIAVGINVTH 200

Query: 180 QVTLTDADLLKLKESKGKHASLLSDMCKFYRDWHVKSDGLHGIFLHDPVSFVAGVRPELF 239
           QV +T  D  KL  SKGK A  L  +   Y D+H+ +  + G++LHDP + +A   P LF
Sbjct: 201 QVIMTADDKDKLASSKGKLAQYLCKILDVYYDYHLTAYEIKGVYLHDPATILAAFLPSLF 260

Query: 240 TYKKGVVRVETQGICVGHTLMDQGLKKWNTSNPWTDYSPVSVAWTV 285
           TY +GV RV+T GI  G TL+   LK++  +N W+D   V VA TV
Sbjct: 261 TYTEGVARVQTSGITRGLTLLYNNLKRFEEANEWSDKPTVKVAVTV 306


>AT5G18890.1 | Symbols:  | Inosine-uridine preferring nucleoside
           hydrolase family protein | chr5:6301652-6304088 FORWARD
           LENGTH=550
          Length = 550

 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 13/89 (14%)

Query: 94  VDKVSEFPGEVTVLALGPLTNVALAVKRDSSFASKVKRIVVLGGSFFA----LGNV---- 145
           VD+VS+    +TVL  GPLT++A  +  D + +S +K + ++GG         GN+    
Sbjct: 311 VDEVSK----ITVLTNGPLTSLAKIISSDKNSSSIIKEVYIVGGHISRGKSDKGNIFTVP 366

Query: 146 -NPAAEANIYGDPEAADVVFTSGANIVVV 173
            N  AE N++ DP AA  V  SG NI ++
Sbjct: 367 SNSYAEFNMFLDPLAAKTVLESGLNITLI 395