Miyakogusa Predicted Gene

Lj1g3v4690380.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4690380.1 Non Chatacterized Hit- tr|D8R0G4|D8R0G4_SELML
Putative uncharacterized protein OS=Selaginella
moelle,31.25,0.00000000004,seg,NULL; PH DOMAIN CONTAINING
PROTEIN,NULL; VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN
(VPS13),Vac,gene.g37022.t1.1
         (364 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G17140.3 | Symbols:  | pleckstrin homology (PH) domain-contai...   417   e-117
AT4G17140.1 | Symbols:  | pleckstrin homology (PH) domain-contai...   417   e-117
AT4G17140.2 | Symbols:  | pleckstrin homology (PH) domain-contai...   417   e-117
AT1G48090.1 | Symbols:  | calcium-dependent lipid-binding family...   189   3e-48
AT5G24740.2 | Symbols:  | Protein of unknown function (DUF1162) ...    54   2e-07
AT5G24740.1 | Symbols:  | Protein of unknown function (DUF1162) ...    53   4e-07

>AT4G17140.3 | Symbols:  | pleckstrin homology (PH)
           domain-containing protein | chr4:9613617-9636618 REVERSE
           LENGTH=4219
          Length = 4219

 Score =  417 bits (1072), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 225/416 (54%), Positives = 266/416 (63%), Gaps = 70/416 (16%)

Query: 1   MQLKPEALNALKLPVKVKAGFLGSVKLKEDIVIANADTGITYQPLVPWSRLGQDPVLVYL 60
           MQLKPEALNALKLPV+VKAGFLGSVKLK                 VPW+RLGQ+PV+VYL
Sbjct: 40  MQLKPEALNALKLPVRVKAGFLGSVKLK-----------------VPWTRLGQEPVVVYL 82

Query: 61  DRIFLLAEPATQVEGCSEDAVQEAKKIRIEFLKFSL---PLSLQYGDGIETMGEVTTTKV 117
           DRIF+LAEPAT VEG SED++QEAK+  I  ++  L      LQ       MG V  T V
Sbjct: 83  DRIFVLAEPATDVEGLSEDSIQEAKRNLIREMETKLVERARRLQTEMNKSWMGSVINTIV 142

Query: 118 RN-------------------GHPFAAGVMLDKLSAVTVDDTGKETFITGGALDLIQKSV 158
            N                   GHPF+AGV L+KLSAVT+D++GKETFITGG LD IQKSV
Sbjct: 143 GNLKLSISNIHIRYEDLESNPGHPFSAGVTLEKLSAVTIDESGKETFITGGTLDSIQKSV 202

Query: 159 ELDRLAVYLDSDIIPWHASKEWEDLLPSEWFQIFKFGTKDGKPADRLLQKHSYVLEPVTG 218
           ELDRLA YLDSD+ PWH  K WE L P EW QIF++GTKDGKPAD L +KH Y+L+PV+G
Sbjct: 203 ELDRLAFYLDSDMSPWHIDKPWEVLTPFEWDQIFRYGTKDGKPADCLTRKHFYILQPVSG 262

Query: 219 KGNYSKLLLNEVADSKQPLQKAVVNLDDVTISLSKDGYRDIMKLADNFAAFNQRLKYAHF 278
              YSK   NE +++ QPLQKA VNLDDVT+ LSK GYRD+MKLADNFAAFNQRLKYAH+
Sbjct: 263 NAKYSKSQANESSNAVQPLQKAYVNLDDVTLCLSKGGYRDVMKLADNFAAFNQRLKYAHY 322

Query: 279 RPPVPVKADPRSWWKYAYRAVSDQMKKA-------------------------------S 307
           RP VPVK D +SWWKYAYR VS+Q+K A                               S
Sbjct: 323 RPSVPVKIDAKSWWKYAYRVVSEQIKIASGRMSWEHVLKYTSLRKRYITQYASLLKSDIS 382

Query: 308 QVTISGNKXXXXXXXXXXXXXXXQWRMLAHKFVEQSAEPNLSVRKQKAGNSWWSFG 363
           ++ +  ++               QWRMLAHKFVE+S +     +KQ+A +SWW FG
Sbjct: 383 RIVVDDDEEIEALDRELDTDVILQWRMLAHKFVERSVQAENYSKKQQAKSSWWPFG 438


>AT4G17140.1 | Symbols:  | pleckstrin homology (PH)
           domain-containing protein | chr4:9613617-9636618 REVERSE
           LENGTH=4216
          Length = 4216

 Score =  417 bits (1072), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 225/416 (54%), Positives = 266/416 (63%), Gaps = 70/416 (16%)

Query: 1   MQLKPEALNALKLPVKVKAGFLGSVKLKEDIVIANADTGITYQPLVPWSRLGQDPVLVYL 60
           MQLKPEALNALKLPV+VKAGFLGSVKLK                 VPW+RLGQ+PV+VYL
Sbjct: 40  MQLKPEALNALKLPVRVKAGFLGSVKLK-----------------VPWTRLGQEPVVVYL 82

Query: 61  DRIFLLAEPATQVEGCSEDAVQEAKKIRIEFLKFSL---PLSLQYGDGIETMGEVTTTKV 117
           DRIF+LAEPAT VEG SED++QEAK+  I  ++  L      LQ       MG V  T V
Sbjct: 83  DRIFVLAEPATDVEGLSEDSIQEAKRNLIREMETKLVERARRLQTEMNKSWMGSVINTIV 142

Query: 118 RN-------------------GHPFAAGVMLDKLSAVTVDDTGKETFITGGALDLIQKSV 158
            N                   GHPF+AGV L+KLSAVT+D++GKETFITGG LD IQKSV
Sbjct: 143 GNLKLSISNIHIRYEDLESNPGHPFSAGVTLEKLSAVTIDESGKETFITGGTLDSIQKSV 202

Query: 159 ELDRLAVYLDSDIIPWHASKEWEDLLPSEWFQIFKFGTKDGKPADRLLQKHSYVLEPVTG 218
           ELDRLA YLDSD+ PWH  K WE L P EW QIF++GTKDGKPAD L +KH Y+L+PV+G
Sbjct: 203 ELDRLAFYLDSDMSPWHIDKPWEVLTPFEWDQIFRYGTKDGKPADCLTRKHFYILQPVSG 262

Query: 219 KGNYSKLLLNEVADSKQPLQKAVVNLDDVTISLSKDGYRDIMKLADNFAAFNQRLKYAHF 278
              YSK   NE +++ QPLQKA VNLDDVT+ LSK GYRD+MKLADNFAAFNQRLKYAH+
Sbjct: 263 NAKYSKSQANESSNAVQPLQKAYVNLDDVTLCLSKGGYRDVMKLADNFAAFNQRLKYAHY 322

Query: 279 RPPVPVKADPRSWWKYAYRAVSDQMKKA-------------------------------S 307
           RP VPVK D +SWWKYAYR VS+Q+K A                               S
Sbjct: 323 RPSVPVKIDAKSWWKYAYRVVSEQIKIASGRMSWEHVLKYTSLRKRYITQYASLLKSDIS 382

Query: 308 QVTISGNKXXXXXXXXXXXXXXXQWRMLAHKFVEQSAEPNLSVRKQKAGNSWWSFG 363
           ++ +  ++               QWRMLAHKFVE+S +     +KQ+A +SWW FG
Sbjct: 383 RIVVDDDEEIEALDRELDTDVILQWRMLAHKFVERSVQAENYSKKQQAKSSWWPFG 438


>AT4G17140.2 | Symbols:  | pleckstrin homology (PH)
           domain-containing protein | chr4:9613617-9636618 REVERSE
           LENGTH=4218
          Length = 4218

 Score =  417 bits (1072), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 225/416 (54%), Positives = 266/416 (63%), Gaps = 70/416 (16%)

Query: 1   MQLKPEALNALKLPVKVKAGFLGSVKLKEDIVIANADTGITYQPLVPWSRLGQDPVLVYL 60
           MQLKPEALNALKLPV+VKAGFLGSVKLK                 VPW+RLGQ+PV+VYL
Sbjct: 40  MQLKPEALNALKLPVRVKAGFLGSVKLK-----------------VPWTRLGQEPVVVYL 82

Query: 61  DRIFLLAEPATQVEGCSEDAVQEAKKIRIEFLKFSL---PLSLQYGDGIETMGEVTTTKV 117
           DRIF+LAEPAT VEG SED++QEAK+  I  ++  L      LQ       MG V  T V
Sbjct: 83  DRIFVLAEPATDVEGLSEDSIQEAKRNLIREMETKLVERARRLQTEMNKSWMGSVINTIV 142

Query: 118 RN-------------------GHPFAAGVMLDKLSAVTVDDTGKETFITGGALDLIQKSV 158
            N                   GHPF+AGV L+KLSAVT+D++GKETFITGG LD IQKSV
Sbjct: 143 GNLKLSISNIHIRYEDLESNPGHPFSAGVTLEKLSAVTIDESGKETFITGGTLDSIQKSV 202

Query: 159 ELDRLAVYLDSDIIPWHASKEWEDLLPSEWFQIFKFGTKDGKPADRLLQKHSYVLEPVTG 218
           ELDRLA YLDSD+ PWH  K WE L P EW QIF++GTKDGKPAD L +KH Y+L+PV+G
Sbjct: 203 ELDRLAFYLDSDMSPWHIDKPWEVLTPFEWDQIFRYGTKDGKPADCLTRKHFYILQPVSG 262

Query: 219 KGNYSKLLLNEVADSKQPLQKAVVNLDDVTISLSKDGYRDIMKLADNFAAFNQRLKYAHF 278
              YSK   NE +++ QPLQKA VNLDDVT+ LSK GYRD+MKLADNFAAFNQRLKYAH+
Sbjct: 263 NAKYSKSQANESSNAVQPLQKAYVNLDDVTLCLSKGGYRDVMKLADNFAAFNQRLKYAHY 322

Query: 279 RPPVPVKADPRSWWKYAYRAVSDQMKKA-------------------------------S 307
           RP VPVK D +SWWKYAYR VS+Q+K A                               S
Sbjct: 323 RPSVPVKIDAKSWWKYAYRVVSEQIKIASGRMSWEHVLKYTSLRKRYITQYASLLKSDIS 382

Query: 308 QVTISGNKXXXXXXXXXXXXXXXQWRMLAHKFVEQSAEPNLSVRKQKAGNSWWSFG 363
           ++ +  ++               QWRMLAHKFVE+S +     +KQ+A +SWW FG
Sbjct: 383 RIVVDDDEEIEALDRELDTDVILQWRMLAHKFVERSVQAENYSKKQQAKSSWWPFG 438


>AT1G48090.1 | Symbols:  | calcium-dependent lipid-binding family
           protein | chr1:17732582-17758194 REVERSE LENGTH=4146
          Length = 4146

 Score =  189 bits (480), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 127/444 (28%), Positives = 209/444 (47%), Gaps = 98/444 (22%)

Query: 1   MQLKPEALNALKLPVKVKAGFLGSVKLKEDIVIANADTGITYQPLVPWSRLGQDPVLVYL 60
           ++LK EALN+LKLPV VK+GF+G++ LK                 VPW  LG++PV+V +
Sbjct: 59  LKLKAEALNSLKLPVAVKSGFVGTITLK-----------------VPWKSLGKEPVIVLI 101

Query: 61  DRIFLLAEPATQVEGCSEDAVQEAKKIRIEFLKFSLPLSLQYG---------DGIETMGE 111
           DR+F+LA PA       E+  ++  + +++ ++ +   +L+            G   +G 
Sbjct: 102 DRVFVLAYPAPDDRTLKEEDREKLLETKLQQIEEAETATLEARAKSKLGSPPQGNSWLGS 161

Query: 112 VTTTKVRN-------------------GHPFAAGVMLDKLSAVTVDDTGKETFITGGALD 152
           +  T + N                   GHPFAAG+ L KL+AVT+D+ G ETF T GALD
Sbjct: 162 IIATIIGNLKVSISNVHIRYEDSTSNPGHPFAAGITLAKLAAVTMDEEGNETFDTSGALD 221

Query: 153 LIQK----------------------SVELDRLAVYLDSDIIPWHASKEWEDLLPSEWFQ 190
            ++K                      S++L+RLA+Y DS+  PW   K+W+++ P EW +
Sbjct: 222 KLRKFKGSSPRGFKYNKNIDWAFKMNSLQLERLALYHDSNSFPWEIEKQWDNITPEEWIE 281

Query: 191 IFKFGTKDGKP----ADRLLQKHSYVLEPVTGKGNYSKLLLNEVADSKQPLQKAVVNLDD 246
           +F+ G K+       +   L +H Y+L P+ G   Y +L   E  + + P ++A V L+D
Sbjct: 282 MFEDGIKEQTEHKIKSKWALNRH-YLLSPINGSLKYHRLGNQERNNPEIPFERASVILND 340

Query: 247 VTISLSKDGYRDIMKLADNFAAFNQRLKYAHFRPPVPVKADPRSWWKYA----------- 295
           V ++++++ Y D +KL +  + +   ++ +H RP VPV   PR WW++A           
Sbjct: 341 VNVTITEEQYHDWIKLVEVVSRYKTYIEISHLRPMVPVSEAPRLWWRFAAQASLQQKRLC 400

Query: 296 YRAVSDQMKKASQ-----VTISGNKXXXXXXXXXXXXXXXQ----------WRMLAHKFV 340
           YR   D +    Q     + +  N                +          WR+LAH  V
Sbjct: 401 YRFSWDSIHHLCQLRRRYIQLYANFLQQSSDVNYPEMREIEKDLDSKVILLWRLLAHAKV 460

Query: 341 EQSAEPNLSVRKQKAGNSWWSFGW 364
           E       + +++     W+SF W
Sbjct: 461 ESVKSKEAAEQRKLKKGGWFSFNW 484


>AT5G24740.2 | Symbols:  | Protein of unknown function (DUF1162) |
           chr5:8486432-8489703 REVERSE LENGTH=389
          Length = 389

 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 76/337 (22%), Positives = 140/337 (41%), Gaps = 67/337 (19%)

Query: 1   MQLKPEALNALKLPVKVKAGFLGSVKLKEDIVIANADTGITYQPLVPWSRLGQDPVLVYL 60
           ++L PEA   L+LP+ +K G +G + +K                 +PW +L +DPV + +
Sbjct: 43  VELNPEAFEYLQLPIALKQGRVGKLSIK-----------------IPWKKLHRDPVTIMI 85

Query: 61  DRIFLLAEPATQVEGCS------EDAVQEAKKIRIEFLKFSLPLSLQYGDGIETMGEVTT 114
           + +F+ A      E  S      E A ++AK    E  K S  +    G G   M  +T 
Sbjct: 86  EDVFICASQRNDQEWSSDVVEKREFAGKKAKLASAELAKLSRRVFDNPG-GNSYMSYITA 144

Query: 115 -------TKVRNGH-------PFAAGVMLD-KLSAVTV---DDTGKET-FITGGALDLIQ 155
                    ++N H       P +  V+L  + S++TV   +  G     + GG ++++ 
Sbjct: 145 KILDSVQVSIKNFHILYSDAQPESGQVVLGLRFSSLTVTKQNSVGPSVGRVRGGQVNIL- 203

Query: 156 KSVELDRLAVYLDSDIIPWHASKEWEDLLPSEWFQIFKFGTKDGKPADRLLQKHSYVLEP 215
             VE++ L +Y D     +  + ++  +         K G  +   +     +  Y+L+P
Sbjct: 204 --VEVEGLEIYCDM----YEGNMDFPSVNE-------KIGFDNWCQSRLQSNRFGYLLKP 250

Query: 216 VTGKGNYSKLLLNEVADSKQPLQKAVVN--LDDVTISLSKDGYRDIMKLADNFAAFNQRL 273
           V        LL+N   +    L +  ++  L DV ++L++   + I+ L D       R 
Sbjct: 251 VHVS---VTLLVNRSGELYDDLPQYSISAELTDVVVTLNEFQLQQILILLDYLQTSQLRE 307

Query: 274 KYAHFRP-PVPVKADP----RSWWKYAYRAVSDQMKK 305
           +Y  +RP    +   P    + WW YA  +V   ++K
Sbjct: 308 RYGRYRPCSTSLSRKPPGWQKLWWHYAQNSVLSDVRK 344


>AT5G24740.1 | Symbols:  | Protein of unknown function (DUF1162) |
           chr5:8470073-8489703 REVERSE LENGTH=3464
          Length = 3464

 Score = 52.8 bits (125), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 78/339 (23%), Positives = 142/339 (41%), Gaps = 68/339 (20%)

Query: 1   MQLKPEALNALKLPVKVKAGFLGSVKLKEDIVIANADTGITYQPLVPWSRLGQDPVLVYL 60
           ++L PEA   L+LP+ +K G +G + +K                 +PW +L +DPV + +
Sbjct: 43  VELNPEAFEYLQLPIALKQGRVGKLSIK-----------------IPWKKLHRDPVTIMI 85

Query: 61  DRIFLLAEPATQVEGCS------EDAVQEAKKIRIEFLKFSLPLSLQYGDGIETMGEVTT 114
           + +F+ A      E  S      E A ++AK    E  K S  +    G G   M  +T 
Sbjct: 86  EDVFICASQRNDQEWSSDVVEKREFAGKKAKLASAELAKLSRRVFDNPG-GNSYMSYITA 144

Query: 115 -------TKVRNGH-------PFAAGVMLD-KLSAVTV---DDTGKET-FITGGALDLIQ 155
                    ++N H       P +  V+L  + S++TV   +  G     + GG ++++ 
Sbjct: 145 KILDSVQVSIKNFHILYSDAQPESGQVVLGLRFSSLTVTKQNSVGPSVGRVRGGQVNIL- 203

Query: 156 KSVELDRLAVYLDSDIIPWHASKEWEDLLPSEWFQIFKFGTKDGKPADRLLQKHSYVLEP 215
             VE++ L +Y D     +  + ++  +         K G  +   +     +  Y+L+P
Sbjct: 204 --VEVEGLEIYCDM----YEGNMDFPSVNE-------KIGFDNWCQSRLQSNRFGYLLKP 250

Query: 216 VTGKGNYSKLLLNEVADSKQPLQKAVVN--LDDVTISLSKDGYRDIMKLADNFAAFNQRL 273
           V        LL+N   +    L +  ++  L DV ++L++   + I+ L D       R 
Sbjct: 251 VHVS---VTLLVNRSGELYDDLPQYSISAELTDVVVTLNEFQLQQILILLDYLQTSQLRE 307

Query: 274 KYAHFRP-PVPVKADP----RSWWKYAYRAV-SDQMKKA 306
           +Y  +RP    +   P    + WW YA  +V SD + K+
Sbjct: 308 RYGRYRPCSTSLSRKPPGWQKLWWHYAQNSVLSDSIDKS 346