Miyakogusa Predicted Gene

Lj1g3v4680350.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4680350.2 tr|E0CZ22|E0CZ22_MOUSE Protein Heatr7a OS=Mus
musculus GN=Heatr7a PE=4 SV=1,27.14,7e-19,SUBFAMILY NOT NAMED,NULL;
MAESTRO-RELATED HEAT DOMAIN-CONTAINING,NULL; seg,NULL; no
description,Arma,CUFF.33007.2
         (279 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G36810.1 | Symbols:  | ARM repeat superfamily protein | chr2:...   352   1e-97

>AT2G36810.1 | Symbols:  | ARM repeat superfamily protein |
           chr2:15425739-15439462 REVERSE LENGTH=1716
          Length = 1716

 Score =  352 bits (904), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 179/283 (63%), Positives = 209/283 (73%), Gaps = 23/283 (8%)

Query: 1   MVGLITRTQLKAALPRLVPTILDLYKKDQDISFLATCXXXXXXXXXXXXXXGPPMLDFED 60
           MVGLITRTQLK+ALPRL+P IL+LYKKD D + LATC              GPP+LDFED
Sbjct: 252 MVGLITRTQLKSALPRLIPAILELYKKDHDDALLATCSLHNLLNASLLSESGPPLLDFED 311

Query: 61  LTLILSTLLPVISIHSESQDQSDFSVGLKMYNEVQHCFLAVGLVYPDDLFLFLVNKCRLK 120
           LT++LSTLLPVI I++E +  SD SVG K YNEVQ CFL VGLVYP+DLF FL+NKC+LK
Sbjct: 312 LTIVLSTLLPVIGINNERKRFSDISVGRKTYNEVQRCFLTVGLVYPEDLFTFLLNKCKLK 371

Query: 121 EEVLTFGALCVLKHLLPRLSEAWHGKIPLLVEAVKSLFEEQNLGVRKALSELIVVMASHC 180
           E+ LTFGALC+LKHLLPRL EAWH K PLLV+   SL +EQ+L VRKALSELIVVMASHC
Sbjct: 372 EDPLTFGALCILKHLLPRLFEAWHSKRPLLVDTASSLLDEQSLAVRKALSELIVVMASHC 431

Query: 181 YLVGSSGELFIEYVVRHCAHTDKYRSDLEITPNKRTEMKIGAVTPGELRAVCEKGLLLVT 240
           YLVG SGELF+EY+VRH A          I  +   + K   V+P +LRAVC KGLLL+T
Sbjct: 432 YLVGPSGELFVEYLVRHSA----------IGESDHLKAKGELVSPTQLRAVCGKGLLLLT 481

Query: 241 ITIPEME-------------HILWPFLLRMIIPRTYTGAVATV 270
           +TIPEME             +ILWPFLL+MIIP+ YTGAVA+V
Sbjct: 482 VTIPEMELSDFNAKEYMKLQYILWPFLLKMIIPKVYTGAVASV 524