Miyakogusa Predicted Gene

Lj1g3v4680350.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4680350.1 Non Chatacterized Hit- tr|B9S0C4|B9S0C4_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,76.56,0,SUBFAMILY NOT NAMED,NULL; MAESTRO-RELATED HEAT
DOMAIN-CONTAINING,NULL; seg,NULL; ARM repeat,Armadill,CUFF.33007.1
         (528 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G36810.1 | Symbols:  | ARM repeat superfamily protein | chr2:...   700   0.0  

>AT2G36810.1 | Symbols:  | ARM repeat superfamily protein |
           chr2:15425739-15439462 REVERSE LENGTH=1716
          Length = 1716

 Score =  700 bits (1806), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 353/535 (65%), Positives = 411/535 (76%), Gaps = 27/535 (5%)

Query: 1   MASST---SIPAPEAVQVXXXXXXXXXXXVREASMSSLKDLSALNPLLILECCAAVSRGG 57
           MASS+   SIPAPEAVQ+           VREASM+SL+D+++LNPLL+L+CC AVSRGG
Sbjct: 1   MASSSLGSSIPAPEAVQLLVSSLADDSSVVREASMASLRDIASLNPLLVLDCCYAVSRGG 60

Query: 58  RRRFGNMAGVFEVMAFGVRALDKRDVDSAFMAKLAKIATAEMISSSKELNSDWQRAATSL 117
           RRRFGNMAGVF+VMAF V AL+K + DS FM KLAKIATAE+ISS KELN+DWQR A+ L
Sbjct: 61  RRRFGNMAGVFQVMAFSVGALEKGESDSVFMGKLAKIATAEIISS-KELNADWQRQASGL 119

Query: 118 LVAIGSHLPDLVMEEIFLHLSGTNSALQAMVQILAEFASTNPLLFIPRWKGVLSRILPIL 177
           LV+IG+H PDL+MEEIFLHLSG  +A  AMVQILA+FAS++ L F PR KGVLS++ PIL
Sbjct: 120 LVSIGTHFPDLMMEEIFLHLSGPATAAPAMVQILADFASSDALQFTPRLKGVLSKVSPIL 179

Query: 178 GSVRDIHRAIFANAFKCWCQAAWQYSIDFPSQFLQDGDVMSFLNSAFELLLRVWAASRDL 237
           G+VRDIHR IFANAFKCW QA W Y  D  S    D DVMSFLNS FELLLRVWA SRD 
Sbjct: 180 GNVRDIHRPIFANAFKCWSQAVWLYITDLTSDSPLDSDVMSFLNSVFELLLRVWAVSRDH 239

Query: 238 KVRVASVEALGQMVGLITRTQLKAALPRLVPTILDLYKKDQDISFLATCXXXXXXXXXXX 297
           KVRV++V+ALGQMVGLITRTQLK+ALPRL+P IL+LYKKD D + LATC           
Sbjct: 240 KVRVSTVDALGQMVGLITRTQLKSALPRLIPAILELYKKDHDDALLATCSLHNLLNASLL 299

Query: 298 XXXGPPMLDFEDLTLILSTLLPVISIHSESQDQSDFSVGLKMYNEVQHCFLAVGLVYPDD 357
              GPP+LDFEDLT++LSTLLPVI I++E +  SD SVG K YNEVQ CFL VGLVYP+D
Sbjct: 300 SESGPPLLDFEDLTIVLSTLLPVIGINNERKRFSDISVGRKTYNEVQRCFLTVGLVYPED 359

Query: 358 LFLFLVNKCRLKEEVLTFGALCVLKHLLPRLSEAWHGKIPLLVEAVKSLFEEQNLGVRKA 417
           LF FL+NKC+LKE+ LTFGALC+LKHLLPRL EAWH K PLLV+   SL +EQ+L VRKA
Sbjct: 360 LFTFLLNKCKLKEDPLTFGALCILKHLLPRLFEAWHSKRPLLVDTASSLLDEQSLAVRKA 419

Query: 418 LSELIVVMASHCYLVGSSGELFIEYVVRHCAHTDKYRSDLEITPNKRTEMKIGAVTPGEL 477
           LSELIVVMASHCYLVG SGELF+EY+VRH A          I  +   + K   V+P +L
Sbjct: 420 LSELIVVMASHCYLVGPSGELFVEYLVRHSA----------IGESDHLKAKGELVSPTQL 469

Query: 478 RAVCEKGLLLVTITIPEME-------------HILWPFLLRMIIPRTYTGAVATV 519
           RAVC KGLLL+T+TIPEME             +ILWPFLL+MIIP+ YTGAVA+V
Sbjct: 470 RAVCGKGLLLLTVTIPEMELSDFNAKEYMKLQYILWPFLLKMIIPKVYTGAVASV 524