Miyakogusa Predicted Gene

Lj1g3v4657820.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4657820.1 tr|G7ID38|G7ID38_MEDTR Alpha-L-fucosidase
OS=Medicago truncatula GN=MTR_1g102230 PE=4
SV=1,83.15,0,Alpha-L-fucosidase,Glycoside hydrolase, family 29;
(Trans)glycosidases,Glycoside hydrolase, superfam,CUFF.32819.1
         (469 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G28100.1 | Symbols: ATFUC1, FUC1 | alpha-L-fucosidase 1 | chr...   451   e-127

>AT2G28100.1 | Symbols: ATFUC1, FUC1 | alpha-L-fucosidase 1 |
           chr2:11974803-11976489 FORWARD LENGTH=506
          Length = 506

 Score =  451 bits (1160), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 221/431 (51%), Positives = 286/431 (66%), Gaps = 13/431 (3%)

Query: 45  QLKWQQREIIMFLHFGVNTFSDREWGTGHESPAIFNPTGLSTAQWANVAAEAGNSLMILN 104
           QL+WQ   + MFLHFG NTF+D EWGTG  +P+IFNPT L+ +QW  +A ++G S +IL 
Sbjct: 42  QLQWQLGSMAMFLHFGPNTFTDSEWGTGKANPSIFNPTHLNASQWVQIAKDSGFSRVILT 101

Query: 105 AKHHDGFCLWPSKYTKHSVISSPWQGGKGDVVGEFVNAASAQGIDVGIYLSPWDRHDSRY 164
           AKHHDGFCLWPS+YT +SV SS W+ G GDVV E  +AA   GI +G+YLSPWDRH+  Y
Sbjct: 102 AKHHDGFCLWPSEYTDYSVKSSQWRNGAGDVVAELASAAKEAGIGLGLYLSPWDRHEQCY 161

Query: 165 GHDLLYNEYYMAQLQELLNKYQNVREIWFDGAKDPKAQNVSYYFSDWFSMVKELQSSINI 224
           G  L YNE+Y++Q+ ELL KY  ++E+W DGAK    +++ Y+F  WFS++ +LQ    I
Sbjct: 162 GKTLEYNEFYLSQMTELLTKYGEIKEVWLDGAKGDGEKDMEYFFDTWFSLIHQLQPKAVI 221

Query: 225 FSDAGPDVRWVGDETGSAGYTCWSTINRTSLAIGSPNISKYLSTGDPRGTDWLPAECDVS 284
           FSDAGPDVRW+GDE G AG TCWS  NRT+  IG    S Y   GD  G DW+PAECDVS
Sbjct: 222 FSDAGPDVRWIGDEAGLAGSTCWSLFNRTNAKIGDTEPS-YSQEGDGYGQDWVPAECDVS 280

Query: 285 IRKGWFWHKSESPRKLSELLDIYYNSVGRNCVLLLNVPPNTTGLISDTDAHRLKELRSAI 344
           IR GWFWH SESP+   +LLDIYYNSVGRNC+ LLNVPPN++GLIS+ D   L+E     
Sbjct: 281 IRPGWFWHASESPKPAVQLLDIYYNSVGRNCLFLLNVPPNSSGLISEQDIKVLEEFSEMK 340

Query: 345 NTIFHKNLAEDCYVKVSSQRGGNEGGFGPENMLDSDHLWSYWAPREEEEGENNDHWIEIW 404
           N+IF  NLA   +V  SS RG     FGP+N+L+ + L  YWAP      EN + W+   
Sbjct: 341 NSIFSNNLARKAFVNSSSIRGDQSSQFGPKNVLE-EGLDKYWAPE-----ENQNEWVLYL 394

Query: 405 GKDGSLRFNVIRIQEAIGLGQRIKRHEIYV------DGKLIIKGTTVGYKRLHRLDGDVN 458
                + FNV+ I+E I +GQRI    +        + + ++ GTTVG KRL R    V 
Sbjct: 395 EFKDLVSFNVLEIREPIHMGQRIASFHLETRKTGSGEWERVVSGTTVGNKRLLRFLNVVE 454

Query: 459 AQVVRIRIKKA 469
           ++ +++ + KA
Sbjct: 455 SRSLKLVVDKA 465