Miyakogusa Predicted Gene
- Lj1g3v4657810.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v4657810.1 Non Chatacterized Hit- tr|I1LDY0|I1LDY0_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.10015
PE,81.97,0,DEAD_ATP_HELICASE,RNA helicase, ATP-dependent, DEAD-box,
conserved site; no description,NULL; DEAD,D,CUFF.32818.1
(638 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G62190.1 | Symbols: PRH75 | DEAD box RNA helicase (PRH75) | c... 779 0.0
AT5G26742.2 | Symbols: emb1138 | DEAD box RNA helicase (RH3) | c... 327 2e-89
AT5G26742.1 | Symbols: emb1138 | DEAD box RNA helicase (RH3) | c... 327 2e-89
AT3G22330.1 | Symbols: PMH2, ATRH53 | putative mitochondrial RNA... 310 2e-84
AT3G22310.1 | Symbols: PMH1, ATRH9 | putative mitochondrial RNA ... 306 3e-83
AT5G26742.3 | Symbols: emb1138 | DEAD box RNA helicase (RH3) | c... 305 8e-83
AT1G55150.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 241 9e-64
AT5G63120.2 | Symbols: | P-loop containing nucleoside triphosph... 234 1e-61
AT5G14610.2 | Symbols: | DEAD box RNA helicase family protein |... 233 3e-61
AT5G14610.1 | Symbols: | DEAD box RNA helicase family protein |... 229 3e-60
AT3G01540.4 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 | ... 229 5e-60
AT3G01540.3 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 | ... 229 5e-60
AT3G01540.2 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 | ... 229 5e-60
AT3G01540.1 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 | ... 229 5e-60
AT1G31970.1 | Symbols: STRS1 | DEA(D/H)-box RNA helicase family ... 226 5e-59
AT3G06480.1 | Symbols: | DEAD box RNA helicase family protein |... 224 1e-58
AT3G58570.1 | Symbols: | P-loop containing nucleoside triphosph... 218 1e-56
AT2G42520.1 | Symbols: | P-loop containing nucleoside triphosph... 214 1e-55
AT3G58510.3 | Symbols: | DEA(D/H)-box RNA helicase family prote... 209 7e-54
AT3G58510.2 | Symbols: | DEA(D/H)-box RNA helicase family prote... 209 7e-54
AT3G58510.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 209 7e-54
AT5G63120.1 | Symbols: | P-loop containing nucleoside triphosph... 195 1e-49
AT1G20920.1 | Symbols: | P-loop containing nucleoside triphosph... 191 9e-49
AT1G20920.2 | Symbols: | P-loop containing nucleoside triphosph... 191 1e-48
AT5G51280.1 | Symbols: | DEAD-box protein abstrakt, putative | ... 186 3e-47
AT2G33730.1 | Symbols: | P-loop containing nucleoside triphosph... 185 7e-47
AT5G08620.1 | Symbols: STRS2, ATRH25 | DEA(D/H)-box RNA helicase... 185 7e-47
AT5G08610.1 | Symbols: | P-loop containing nucleoside triphosph... 183 4e-46
AT4G33370.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 182 5e-46
AT4G16630.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 182 7e-46
AT5G63630.1 | Symbols: | P-loop containing nucleoside triphosph... 180 3e-45
AT2G47330.1 | Symbols: | P-loop containing nucleoside triphosph... 180 3e-45
AT2G07750.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 172 5e-43
AT1G63250.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 172 5e-43
AT3G09620.1 | Symbols: | P-loop containing nucleoside triphosph... 171 1e-42
AT1G16280.1 | Symbols: RH36, AtRH36, SWA3 | RNA helicase 36 | ch... 162 6e-40
AT5G05450.1 | Symbols: | P-loop containing nucleoside triphosph... 160 2e-39
AT1G77030.1 | Symbols: | hydrolases, acting on acid anhydrides,... 159 5e-39
AT1G28180.1 | Symbols: | P-loop containing nucleoside triphosph... 157 3e-38
AT5G60990.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 156 5e-38
AT3G02065.3 | Symbols: | P-loop containing nucleoside triphosph... 151 1e-36
AT3G02065.2 | Symbols: | P-loop containing nucleoside triphosph... 151 1e-36
AT4G00660.1 | Symbols: RH8, ATRH8 | RNAhelicase-like 8 | chr4:27... 150 2e-36
AT4G00660.2 | Symbols: RH8, ATRH8 | RNAhelicase-like 8 | chr4:27... 150 2e-36
AT2G45810.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 150 3e-36
AT1G71370.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 149 5e-36
AT3G02065.1 | Symbols: | P-loop containing nucleoside triphosph... 147 2e-35
AT3G19760.1 | Symbols: EIF4A-III | eukaryotic initiation factor ... 147 2e-35
AT3G61240.2 | Symbols: | DEA(D/H)-box RNA helicase family prote... 147 2e-35
AT3G61240.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 147 2e-35
AT1G72730.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 147 3e-35
AT1G51380.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 147 3e-35
AT5G65900.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 147 3e-35
AT3G09720.1 | Symbols: | P-loop containing nucleoside triphosph... 146 4e-35
AT5G54910.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 145 1e-34
AT3G13920.1 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translat... 145 1e-34
AT3G13920.4 | Symbols: EIF4A1 | eukaryotic translation initiatio... 144 1e-34
AT3G13920.3 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translat... 144 2e-34
AT3G13920.2 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translat... 144 2e-34
AT3G18600.1 | Symbols: | P-loop containing nucleoside triphosph... 143 3e-34
AT1G54270.1 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-2026201... 142 1e-33
AT4G09730.1 | Symbols: RH39 | RH39 | chr4:6136333-6139510 FORWAR... 141 1e-33
AT1G54270.2 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-2026201... 141 1e-33
AT2G40700.1 | Symbols: | P-loop containing nucleoside triphosph... 137 3e-32
AT3G16840.1 | Symbols: | P-loop containing nucleoside triphosph... 135 1e-31
AT4G15850.1 | Symbols: ATRH1, RH1 | RNA helicase 1 | chr4:900142... 132 1e-30
AT3G53110.1 | Symbols: LOS4 | P-loop containing nucleoside triph... 129 7e-30
AT1G12770.1 | Symbols: ISE1, EMB1586 | P-loop containing nucleos... 127 3e-29
AT5G11170.1 | Symbols: | DEAD/DEAH box RNA helicase family prot... 125 1e-28
AT5G11200.1 | Symbols: | DEAD/DEAH box RNA helicase family prot... 125 1e-28
AT5G11170.2 | Symbols: | DEAD/DEAH box RNA helicase family prot... 123 4e-28
AT3G06980.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 118 1e-26
AT5G11200.3 | Symbols: | DEAD/DEAH box RNA helicase family prot... 110 2e-24
AT1G71280.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 103 3e-22
AT4G34910.1 | Symbols: | P-loop containing nucleoside triphosph... 100 4e-21
AT5G19210.2 | Symbols: | P-loop containing nucleoside triphosph... 84 3e-16
AT5G11200.2 | Symbols: | DEAD/DEAH box RNA helicase family prot... 74 4e-13
AT5G19210.1 | Symbols: | P-loop containing nucleoside triphosph... 59 1e-08
AT1G59990.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 59 2e-08
>AT5G62190.1 | Symbols: PRH75 | DEAD box RNA helicase (PRH75) |
chr5:24980542-24983879 REVERSE LENGTH=671
Length = 671
Score = 779 bits (2011), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/540 (70%), Positives = 443/540 (82%), Gaps = 1/540 (0%)
Query: 47 VKKEDPNAVSKFRISGPLREMLKEKGIVSLFPIQAMTFDTVLDGSDLVGRARTGQGKTLA 106
V+ ++PNAVSKFRIS PLRE LK GI +LFPIQA TFD VLDG+DLVGRARTGQGKTLA
Sbjct: 90 VEVDNPNAVSKFRISAPLREKLKANGIEALFPIQASTFDMVLDGADLVGRARTGQGKTLA 149
Query: 107 FVLPILESLTNGPTKASRKTGYGRPPSVIVLLPTRELACQVHADFEVYGGAMGLTSCCLY 166
FVLPILESL NGP K+ RK GYGR PSV+VLLPTRELA QV ADF+ YGG++GL+SCCLY
Sbjct: 150 FVLPILESLVNGPAKSKRKMGYGRSPSVLVLLPTRELAKQVAADFDAYGGSLGLSSCCLY 209
Query: 167 GGAPYQGQEMKLKRGVDVVIGTPGRIKDHIERGNIDLSQLKFRVLDEADEMLRMGFVEDV 226
GG Y QE KLKRGVD+V+GTPGRIKDHIER N+D S L+FRVLDEADEMLRMGFVEDV
Sbjct: 210 GGDSYPVQEGKLKRGVDIVVGTPGRIKDHIERQNLDFSYLQFRVLDEADEMLRMGFVEDV 269
Query: 227 ELILGKVKNVGQVQTLLFSATLPDWVKQIAAKFLKRDKKTADLVGNTKMKASTSVRHIVL 286
ELILGKV++ +VQTLLFSATLP WVK I+ +FLKRD+KT DLVGN KMKAS SVRHI +
Sbjct: 270 ELILGKVEDSTKVQTLLFSATLPSWVKNISNRFLKRDQKTIDLVGNDKMKASNSVRHIAI 329
Query: 287 PCTSSARSQLIPDIIRCYSSGGRTIIFTETKESASQLSQLLPGARALHGDIQQAQREVTL 346
PC +A ++LIPDII CYSSGG+TIIF ETK S+LS LL G+RALHG+I Q+QREVTL
Sbjct: 330 PCNKAAMARLIPDIISCYSSGGQTIIFAETKVQVSELSGLLDGSRALHGEIPQSQREVTL 389
Query: 347 SGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVML 406
+GFR+GKF TLVATNVAARGLDINDVQLIIQCEPPR+VEAYIHRSGRTGRAGNTGVAV L
Sbjct: 390 AGFRNGKFATLVATNVAARGLDINDVQLIIQCEPPREVEAYIHRSGRTGRAGNTGVAVTL 449
Query: 407 YDPXXXXXXXXXXXXGVKFEHVSAPQPDDIAKAVGGEAAEMITQVSDSVIPAFKSAAKEL 466
YD G+KFEH++APQPD+IA++ G EAAE + QV DSV+PAF AAKEL
Sbjct: 450 YDSRKSSVSRIEKEAGIKFEHLAAPQPDEIARSGGMEAAEKVKQVCDSVVPAFLEAAKEL 509
Query: 467 LDNSDLSIVEXXXXXXXXXVGYTEIKKRSLLTSMENYVTLLLESGRPIFTPSFAYGILRR 526
L+ S LS G+TEIKKRSLLTSMENYVTL LE+G+PI++PSF YG+LRR
Sbjct: 510 LETSGLSAEVLLAKALAKTAGFTEIKKRSLLTSMENYVTLHLEAGKPIYSPSFVYGLLRR 569
Query: 527 FLPEEKVEAVQGLTLTADGNGVVFDVPAEDLKTYIDG-QENAANVSLEVLKALPRLQQKD 585
LP++KVE ++GL+LTAD G VFDV DL +I G Q++A ++SLEV+K +P+LQ+++
Sbjct: 570 VLPDDKVEMIEGLSLTADKTGAVFDVKQSDLDLFIAGAQKSAGSMSLEVVKVMPKLQERE 629
>AT5G26742.2 | Symbols: emb1138 | DEAD box RNA helicase (RH3) |
chr5:9285540-9288871 REVERSE LENGTH=748
Length = 748
Score = 327 bits (837), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 213/546 (39%), Positives = 305/546 (55%), Gaps = 33/546 (6%)
Query: 54 AVSKFRISGPLREMLKEKGIVSLFPIQAMTFDTVLDGSDLVGRARTGQGKTLAFVLPILE 113
A+SK + L E L+++GI LFPIQ L G D++ RA+TG GKTLAF +PI++
Sbjct: 103 AISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIK 162
Query: 114 SLTN--GPTKASRKTGYGRPPSVIVLLPTRELACQVHADFEVYGGAMGLTSCCLYGGAPY 171
LT G A R++G R P +VL PTRELA QV E+ A L++ C+YGG Y
Sbjct: 163 RLTEEAGDYTAFRRSG--RLPKFLVLAPTRELAKQVEK--EIKESAPYLSTVCVYGGVSY 218
Query: 172 QGQEMKLKRGVDVVIGTPGRIKDHIERGNIDLSQLKFRVLDEADEMLRMGFVEDVELILG 231
Q+ L RGVDVV+GTPGRI D IE ++ L ++++ VLDEAD+ML +GF E VE IL
Sbjct: 219 TIQQSALTRGVDVVVGTPGRIIDLIEGRSLKLGEVEYLVLDEADQMLAVGFEEAVESILE 278
Query: 232 KVKNVGQVQTLLFSATLPDWVKQIAAKFLKRDKKTADLVGNTKMKASTSVRHIVLPCTSS 291
+ + Q++LFSAT+P WVK++A K+L + DLVG+ K + ++ + TS+
Sbjct: 279 NLPT--KRQSMLFSATMPTWVKKLARKYLD-NPLNIDLVGDQDEKLAEGIKLYAIATTST 335
Query: 292 ARSQLIPDIIRCYSSGGRTIIFTETKESASQLSQLLPGA---RALHGDIQQAQREVTLSG 348
++ ++ D+I Y+ GG+TI+FT+TK A ++S L + ALHGDI Q QRE TL+
Sbjct: 336 SKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALSNSIATEALHGDISQHQRERTLNA 395
Query: 349 FRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLY- 407
FR GKF LVAT+VA+RGLDI +V L+I E P D E ++HRSGRTGRAG G A++++
Sbjct: 396 FRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGSAILMHT 455
Query: 408 DPXXXXXXXXXXXXGVKFEHVSAPQPDDIAKAVGGEAAEMITQVSDSVIPAFKSAAKELL 467
G FE +S P D+ ++ + + V I F + A++L
Sbjct: 456 SSQKRTVRSLERDVGCHFEFISPPTVGDLLESSADQVVATLNGVHPDSIKFFSATAQKLY 515
Query: 468 DNSDLSIVEXXXXXXXXXVGYTE-IKKRSLLTSMENYVTLLLESGRPIFTPSFAYGILRR 526
+ + G+++ RSLL+ + +VTL L I P+ A G L
Sbjct: 516 EEKG---TDALAAALAHLSGFSQPPSSRSLLSHEKGWVTLQL-----IRDPTNARGFLSA 567
Query: 527 -----FLPE---EKVEAVQGLTLTADG--NGVVFDVPAEDLKTYIDGQENAANVSLEVLK 576
FL + + V + L AD G VFD+P E K ++ N SL ++
Sbjct: 568 RSVTGFLSDLYRTAADEVGKIFLIADDRIQGAVFDLPEEIAKELLEKDVPEGN-SLSMIT 626
Query: 577 ALPRLQ 582
LP LQ
Sbjct: 627 KLPPLQ 632
>AT5G26742.1 | Symbols: emb1138 | DEAD box RNA helicase (RH3) |
chr5:9285540-9288871 REVERSE LENGTH=747
Length = 747
Score = 327 bits (837), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 213/546 (39%), Positives = 305/546 (55%), Gaps = 33/546 (6%)
Query: 54 AVSKFRISGPLREMLKEKGIVSLFPIQAMTFDTVLDGSDLVGRARTGQGKTLAFVLPILE 113
A+SK + L E L+++GI LFPIQ L G D++ RA+TG GKTLAF +PI++
Sbjct: 103 AISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIK 162
Query: 114 SLTN--GPTKASRKTGYGRPPSVIVLLPTRELACQVHADFEVYGGAMGLTSCCLYGGAPY 171
LT G A R++G R P +VL PTRELA QV E+ A L++ C+YGG Y
Sbjct: 163 RLTEEAGDYTAFRRSG--RLPKFLVLAPTRELAKQVEK--EIKESAPYLSTVCVYGGVSY 218
Query: 172 QGQEMKLKRGVDVVIGTPGRIKDHIERGNIDLSQLKFRVLDEADEMLRMGFVEDVELILG 231
Q+ L RGVDVV+GTPGRI D IE ++ L ++++ VLDEAD+ML +GF E VE IL
Sbjct: 219 TIQQSALTRGVDVVVGTPGRIIDLIEGRSLKLGEVEYLVLDEADQMLAVGFEEAVESILE 278
Query: 232 KVKNVGQVQTLLFSATLPDWVKQIAAKFLKRDKKTADLVGNTKMKASTSVRHIVLPCTSS 291
+ + Q++LFSAT+P WVK++A K+L + DLVG+ K + ++ + TS+
Sbjct: 279 NLPT--KRQSMLFSATMPTWVKKLARKYLD-NPLNIDLVGDQDEKLAEGIKLYAIATTST 335
Query: 292 ARSQLIPDIIRCYSSGGRTIIFTETKESASQLSQLLPGA---RALHGDIQQAQREVTLSG 348
++ ++ D+I Y+ GG+TI+FT+TK A ++S L + ALHGDI Q QRE TL+
Sbjct: 336 SKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALSNSIATEALHGDISQHQRERTLNA 395
Query: 349 FRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLY- 407
FR GKF LVAT+VA+RGLDI +V L+I E P D E ++HRSGRTGRAG G A++++
Sbjct: 396 FRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGSAILMHT 455
Query: 408 DPXXXXXXXXXXXXGVKFEHVSAPQPDDIAKAVGGEAAEMITQVSDSVIPAFKSAAKELL 467
G FE +S P D+ ++ + + V I F + A++L
Sbjct: 456 SSQKRTVRSLERDVGCHFEFISPPTVGDLLESSADQVVATLNGVHPDSIKFFSATAQKLY 515
Query: 468 DNSDLSIVEXXXXXXXXXVGYTE-IKKRSLLTSMENYVTLLLESGRPIFTPSFAYGILRR 526
+ + G+++ RSLL+ + +VTL L I P+ A G L
Sbjct: 516 EEKG---TDALAAALAHLSGFSQPPSSRSLLSHEKGWVTLQL-----IRDPTNARGFLSA 567
Query: 527 -----FLPE---EKVEAVQGLTLTADG--NGVVFDVPAEDLKTYIDGQENAANVSLEVLK 576
FL + + V + L AD G VFD+P E K ++ N SL ++
Sbjct: 568 RSVTGFLSDLYRTAADEVGKIFLIADDRIQGAVFDLPEEIAKELLEKDVPEGN-SLSMIT 626
Query: 577 ALPRLQ 582
LP LQ
Sbjct: 627 KLPPLQ 632
>AT3G22330.1 | Symbols: PMH2, ATRH53 | putative mitochondrial RNA
helicase 2 | chr3:7892641-7895145 FORWARD LENGTH=616
Length = 616
Score = 310 bits (795), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 165/360 (45%), Positives = 235/360 (65%), Gaps = 12/360 (3%)
Query: 51 DPNAVSKFRISGPLREMLKEKGIVSLFPIQAMTFDTVLDGSDLVGRARTGQGKTLAFVLP 110
D A+S+ IS + + L KGI LFPIQ + ++G D++GRARTG GKTLAF +P
Sbjct: 102 DGLAISELGISPEIVKALSSKGIEKLFPIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIP 161
Query: 111 ILESLTNGPTKASRKTGYGRPPSVIVLLPTRELACQVHADFEVYGGAMGLTSCCLYGGAP 170
I++ + K + K G GR P +VL PTRELA QV +F A L + CLYGG P
Sbjct: 162 IIDKII----KYNAKHGRGRNPLCLVLAPTRELARQVEKEFRE--SAPSLDTICLYGGTP 215
Query: 171 YQGQEMKLKRGVDVVIGTPGRIKDHIERGNIDLSQLKFRVLDEADEMLRMGFVEDVELIL 230
Q +L GVDV +GTPGR+ D ++RG ++LS+++F VLDEAD+ML++GF EDVE+IL
Sbjct: 216 IGQQMRQLDYGVDVAVGTPGRVIDLMKRGALNLSEVQFVVLDEADQMLQVGFAEDVEIIL 275
Query: 231 GKVKNVGQVQTLLFSATLPDWVKQIAAKFLKRDKKTADLVGNTKMKASTSVRHIVLPCTS 290
K+ + Q+++FSAT+P W++ + K+L + T DLVG++ K + + + S
Sbjct: 276 EKLPE--KRQSMMFSATMPSWIRSLTKKYLN-NPLTVDLVGDSDQKLADGITTYSIIADS 332
Query: 291 SARSQLIPDIIRCYSSGGRTIIFTETKESASQLSQLLPGA---RALHGDIQQAQREVTLS 347
R+ +I ++ ++ GG+ I+FT+TK A +LS L + ALHGDI Q+QRE TL+
Sbjct: 333 YGRASIIGPLVTEHAKGGKCIVFTQTKRDADRLSYALARSFKCEALHGDISQSQRERTLA 392
Query: 348 GFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLY 407
GFR G F LVAT+VAARGLD+ +V LII E P + E ++HR+GRTGRAG G A+++Y
Sbjct: 393 GFRDGHFNILVATDVAARGLDVPNVDLIIHYELPNNTETFVHRTGRTGRAGKKGSAILIY 452
>AT3G22310.1 | Symbols: PMH1, ATRH9 | putative mitochondrial RNA
helicase 1 | chr3:7887382-7889806 FORWARD LENGTH=610
Length = 610
Score = 306 bits (784), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 160/357 (44%), Positives = 234/357 (65%), Gaps = 12/357 (3%)
Query: 54 AVSKFRISGPLREMLKEKGIVSLFPIQAMTFDTVLDGSDLVGRARTGQGKTLAFVLPILE 113
A++ IS + + LK +GI LFPIQ + ++G D++GRARTG GKTLAF +PI++
Sbjct: 117 AIADLGISPEIVKALKGRGIEKLFPIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIPIID 176
Query: 114 SLTNGPTKASRKTGYGRPPSVIVLLPTRELACQVHADFEVYGGAMGLTSCCLYGGAPYQG 173
+ K + K G G+ P +VL PTRELA QV +F A L + CLYGG P
Sbjct: 177 KII----KFNAKHGRGKNPQCLVLAPTRELARQVEKEFRE--SAPSLDTICLYGGTPIGQ 230
Query: 174 QEMKLKRGVDVVIGTPGRIKDHIERGNIDLSQLKFRVLDEADEMLRMGFVEDVELILGKV 233
Q +L G+DV +GTPGRI D ++RG ++LS+++F VLDEAD+ML++GF EDVE+IL K+
Sbjct: 231 QMRELNYGIDVAVGTPGRIIDLMKRGALNLSEVQFVVLDEADQMLQVGFAEDVEIILQKL 290
Query: 234 KNVGQVQTLLFSATLPDWVKQIAAKFLKRDKKTADLVGNTKMKASTSVRHIVLPCTSSAR 293
+ Q+++FSAT+P W++ + K+L + T DLVG++ K + + + S R
Sbjct: 291 P--AKRQSMMFSATMPSWIRSLTKKYLN-NPLTIDLVGDSDQKLADGITMYSIAADSYGR 347
Query: 294 SQLIPDIIRCYSSGGRTIIFTETKESASQLSQLLPGA---RALHGDIQQAQREVTLSGFR 350
+ +I +++ + GG+ I+FT+TK A +L+ L + ALHGDI QAQRE TL+GFR
Sbjct: 348 ASIIGPLVKEHGKGGKCIVFTQTKRDADRLAFGLAKSYKCEALHGDISQAQRERTLAGFR 407
Query: 351 SGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLY 407
G F LVAT+VAARGLD+ +V L+I E P + E ++HR+GRTGRAG G A++++
Sbjct: 408 DGNFSILVATDVAARGLDVPNVDLVIHYELPNNTETFVHRTGRTGRAGKKGSAILIH 464
>AT5G26742.3 | Symbols: emb1138 | DEAD box RNA helicase (RH3) |
chr5:9285540-9288618 REVERSE LENGTH=655
Length = 655
Score = 305 bits (780), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 200/512 (39%), Positives = 287/512 (56%), Gaps = 33/512 (6%)
Query: 88 LDGSDLVGRARTGQGKTLAFVLPILESLTN--GPTKASRKTGYGRPPSVIVLLPTRELAC 145
L G D++ RA+TG GKTLAF +PI++ LT G A R++G R P +VL PTRELA
Sbjct: 44 LQGRDIIARAKTGTGKTLAFGIPIIKRLTEEAGDYTAFRRSG--RLPKFLVLAPTRELAK 101
Query: 146 QVHADFEVYGGAMGLTSCCLYGGAPYQGQEMKLKRGVDVVIGTPGRIKDHIERGNIDLSQ 205
QV E+ A L++ C+YGG Y Q+ L RGVDVV+GTPGRI D IE ++ L +
Sbjct: 102 QVEK--EIKESAPYLSTVCVYGGVSYTIQQSALTRGVDVVVGTPGRIIDLIEGRSLKLGE 159
Query: 206 LKFRVLDEADEMLRMGFVEDVELILGKVKNVGQVQTLLFSATLPDWVKQIAAKFLKRDKK 265
+++ VLDEAD+ML +GF E VE IL + + Q++LFSAT+P WVK++A K+L +
Sbjct: 160 VEYLVLDEADQMLAVGFEEAVESILENLPT--KRQSMLFSATMPTWVKKLARKYLD-NPL 216
Query: 266 TADLVGNTKMKASTSVRHIVLPCTSSARSQLIPDIIRCYSSGGRTIIFTETKESASQLSQ 325
DLVG+ K + ++ + TS+++ ++ D+I Y+ GG+TI+FT+TK A ++S
Sbjct: 217 NIDLVGDQDEKLAEGIKLYAIATTSTSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSL 276
Query: 326 LLPGA---RALHGDIQQAQREVTLSGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPR 382
L + ALHGDI Q QRE TL+ FR GKF LVAT+VA+RGLDI +V L+I E P
Sbjct: 277 ALSNSIATEALHGDISQHQRERTLNAFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPN 336
Query: 383 DVEAYIHRSGRTGRAGNTGVAVMLY-DPXXXXXXXXXXXXGVKFEHVSAPQPDDIAKAVG 441
D E ++HRSGRTGRAG G A++++ G FE +S P D+ ++
Sbjct: 337 DPETFVHRSGRTGRAGKEGSAILMHTSSQKRTVRSLERDVGCHFEFISPPTVGDLLESSA 396
Query: 442 GEAAEMITQVSDSVIPAFKSAAKELLDNSDLSIVEXXXXXXXXXVGYTE-IKKRSLLTSM 500
+ + V I F + A++L + + G+++ RSLL+
Sbjct: 397 DQVVATLNGVHPDSIKFFSATAQKLYEEKG---TDALAAALAHLSGFSQPPSSRSLLSHE 453
Query: 501 ENYVTLLLESGRPIFTPSFAYGILRR-----FLPE---EKVEAVQGLTLTADG--NGVVF 550
+ +VTL L I P+ A G L FL + + V + L AD G VF
Sbjct: 454 KGWVTLQL-----IRDPTNARGFLSARSVTGFLSDLYRTAADEVGKIFLIADDRIQGAVF 508
Query: 551 DVPAEDLKTYIDGQENAANVSLEVLKALPRLQ 582
D+P E K ++ N SL ++ LP LQ
Sbjct: 509 DLPEEIAKELLEKDVPEGN-SLSMITKLPPLQ 539
>AT1G55150.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:20574634-20577141 FORWARD LENGTH=501
Length = 501
Score = 241 bits (616), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 138/366 (37%), Positives = 211/366 (57%), Gaps = 16/366 (4%)
Query: 49 KEDPNAVSKFRISG---PLREMLKEKGIVSLFPIQAMTFDTVLDGSDLVGRARTGQGKTL 105
K+ P V FR G + E +K+ G PIQ+ + + G DL+G A TG GKTL
Sbjct: 92 KDIPKPVKSFRDVGFPDYVLEEVKKAGFTEPTPIQSQGWPMAMKGRDLIGIAETGSGKTL 151
Query: 106 AFVLPILESLTNGPTKASRKTGYGRPPSVIVLLPTRELACQVHADFEVYGGAMGLTSCCL 165
+++LP + + P A +G P V+VL PTRELA Q+ + +G + + + C+
Sbjct: 152 SYLLPAIVHVNAQPMLA-----HGDGPIVLVLAPTRELAVQIQQEASKFGSSSKIKTTCI 206
Query: 166 YGGAPYQGQEMKLKRGVDVVIGTPGRIKDHIERGNIDLSQLKFRVLDEADEMLRMGFVED 225
YGG P Q L++GV++VI TPGR+ D +E N +L ++ + VLDEAD ML MGF
Sbjct: 207 YGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESNNTNLRRVTYLVLDEADRMLDMGFDPQ 266
Query: 226 VELILGKVKNVGQVQTLLFSATLPDWVKQIAAKFLKRDKKTADLVGNTKMKASTSVRHIV 285
+ I+ ++ QTL +SAT P V+Q++ KFL K ++G++ +KA+ ++R IV
Sbjct: 267 IRKIVSHIRP--DRQTLYWSATWPKEVEQLSKKFLYNPYKV--IIGSSDLKANRAIRQIV 322
Query: 286 LPCTSSARSQLIPDIIRCYSSGGRTIIFTETKESASQLSQLLP----GARALHGDIQQAQ 341
+ S + + ++ G R ++F +TK+ Q+++ L A ++HGD QA+
Sbjct: 323 DVISESQKYNKLVKLLEDIMDGSRILVFLDTKKGCDQITRQLRMDGWPALSIHGDKSQAE 382
Query: 342 REVTLSGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTG 401
R+ LS FRSGK + AT+VAARGLD+ DV+ +I + P +E Y+HR GRTGRAG G
Sbjct: 383 RDWVLSEFRSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKG 442
Query: 402 VAVMLY 407
A +
Sbjct: 443 TAYTFF 448
>AT5G63120.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:25318967-25322071
REVERSE LENGTH=591
Length = 591
Score = 234 bits (597), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 131/346 (37%), Positives = 204/346 (58%), Gaps = 13/346 (3%)
Query: 66 EMLKEKGIVSLFPIQAMTFDTVLDGSDLVGRARTGQGKTLAFVLPILESLTNGPTKASRK 125
E + + G PIQA + L G DL+G A TG GKTLA++LP L ++ P +
Sbjct: 178 EAIAKLGFTEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPALVHVSAQP-----R 232
Query: 126 TGYGRPPSVIVLLPTRELACQVHADFEVYGGAMGLTSCCLYGGAPYQGQEMKLKRGVDVV 185
G P V++L PTRELA Q+ + +G G+ S C+YGGAP Q L+RGV++V
Sbjct: 233 LGQDDGPIVLILAPTRELAVQIQEESRKFGLRSGVRSTCIYGGAPKGPQIRDLRRGVEIV 292
Query: 186 IGTPGRIKDHIERGNIDLSQLKFRVLDEADEMLRMGFVEDVELILGKVKNVGQVQTLLFS 245
I TPGR+ D +E + +L ++ + VLDEAD ML MGF + I+ +++ QTLL+S
Sbjct: 293 IATPGRLIDMLECQHTNLKRVTYLVLDEADRMLDMGFEPQIRKIVSQIR--PDRQTLLWS 350
Query: 246 ATLPDWVKQIAAKFLKRDKKTADLVGNTKMKASTSVRHIVLPCTSSARSQLIPDIIRCYS 305
AT P V+ +A +FL+ K ++G+T +KA+ S+ ++ + + + +++
Sbjct: 351 ATWPREVETLARQFLRDPYKA--IIGSTDLKANQSINQVIEIVPTPEKYNRLLTLLKQLM 408
Query: 306 SGGRTIIFTETKESASQLSQLLP----GARALHGDIQQAQREVTLSGFRSGKFMTLVATN 361
G + +IF ETK Q+++ L A A+HGD Q++R+ L+ F+SG+ + AT+
Sbjct: 409 DGSKILIFVETKRGCDQVTRQLRMDGWPALAIHGDKTQSERDRVLAEFKSGRSPIMTATD 468
Query: 362 VAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLY 407
VAARGLD+ D++ ++ + P +E YIHR GRTGRAG G+A +
Sbjct: 469 VAARGLDVKDIKCVVNYDFPNTLEDYIHRIGRTGRAGAKGMAFTFF 514
>AT5G14610.2 | Symbols: | DEAD box RNA helicase family protein |
chr5:4711271-4714713 FORWARD LENGTH=645
Length = 645
Score = 233 bits (594), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 137/363 (37%), Positives = 207/363 (57%), Gaps = 17/363 (4%)
Query: 52 PNAVSKFRISGPLREMLKE---KGIVSLFPIQAMTFDTVLDGSDLVGRARTGQGKTLAFV 108
P + F +G E+L+E G + PIQA ++ + D+V A+TG GKTL ++
Sbjct: 157 PPPLMSFEATGLPNELLREVYSAGFSAPSPIQAQSWPIAMQNRDIVAIAKTGSGKTLGYL 216
Query: 109 LPILESLTNGPTKASRKTGYGRPPSVIVLLPTRELACQVHADFEVYGGAMGLTSCCLYGG 168
+P L + G P+++VL PTRELA Q+ + +G + ++ CLYGG
Sbjct: 217 IPGFMHLQR--IHNDSRMG----PTILVLSPTRELATQIQVEALKFGKSSKISCACLYGG 270
Query: 169 APYQGQEMKLKRGVDVVIGTPGRIKDHIERGNIDLSQLKFRVLDEADEMLRMGFVEDVEL 228
AP Q +++RGVD+V+ TPGR+ D +E I L Q+ + VLDEAD ML MGF +
Sbjct: 271 APKGPQLKEIERGVDIVVATPGRLNDILEMKRISLHQVSYLVLDEADRMLDMGFEPQIRK 330
Query: 229 ILGKVKNVGQVQTLLFSATLPDWVKQIAAKFLKRDKKTADLVGNT-KMKASTSVRHIVLP 287
I+ +V + QTL+++AT P V++IAA L + +GN ++ A+ S+ +
Sbjct: 331 IVNEVPT--KRQTLMYTATWPKEVRKIAADLLVNPAQVN--IGNVDELVANKSITQTIEV 386
Query: 288 CTSSARSQLIPDIIRCYSSGGRTIIFTETKESASQLSQLLP---GARALHGDIQQAQREV 344
+ + I+R G + IIF TK QL++ L GA A+HGD QA+R+
Sbjct: 387 LAPMEKHSRLEQILRSQEPGSKIIIFCSTKRMCDQLARNLTRTFGAAAIHGDKSQAERDD 446
Query: 345 TLSGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAV 404
L+ FRSG+ LVAT+VAARGLD+ D+++++ + P VE Y+HR GRTGRAG TG+A
Sbjct: 447 VLNQFRSGRTPVLVATDVAARGLDVKDIRVVVNYDFPNGVEDYVHRIGRTGRAGATGLAY 506
Query: 405 MLY 407
+
Sbjct: 507 TFF 509
>AT5G14610.1 | Symbols: | DEAD box RNA helicase family protein |
chr5:4711271-4714713 FORWARD LENGTH=712
Length = 712
Score = 229 bits (585), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 132/345 (38%), Positives = 199/345 (57%), Gaps = 14/345 (4%)
Query: 67 MLKEKGIVSLFPIQAMTFDTVLDGSDLVGRARTGQGKTLAFVLPILESLTNGPTKASRKT 126
M+ G + PIQA ++ + D+V A+TG GKTL +++P L +
Sbjct: 243 MVYSAGFSAPSPIQAQSWPIAMQNRDIVAIAKTGSGKTLGYLIPGFMHLQR--IHNDSRM 300
Query: 127 GYGRPPSVIVLLPTRELACQVHADFEVYGGAMGLTSCCLYGGAPYQGQEMKLKRGVDVVI 186
G P+++VL PTRELA Q+ + +G + ++ CLYGGAP Q +++RGVD+V+
Sbjct: 301 G----PTILVLSPTRELATQIQVEALKFGKSSKISCACLYGGAPKGPQLKEIERGVDIVV 356
Query: 187 GTPGRIKDHIERGNIDLSQLKFRVLDEADEMLRMGFVEDVELILGKVKNVGQVQTLLFSA 246
TPGR+ D +E I L Q+ + VLDEAD ML MGF + I+ +V + QTL+++A
Sbjct: 357 ATPGRLNDILEMKRISLHQVSYLVLDEADRMLDMGFEPQIRKIVNEVPT--KRQTLMYTA 414
Query: 247 TLPDWVKQIAAKFLKRDKKTADLVGNT-KMKASTSVRHIVLPCTSSARSQLIPDIIRCYS 305
T P V++IAA L + +GN ++ A+ S+ + + + I+R
Sbjct: 415 TWPKEVRKIAADLLVNPAQVN--IGNVDELVANKSITQTIEVLAPMEKHSRLEQILRSQE 472
Query: 306 SGGRTIIFTETKESASQLSQLLP---GARALHGDIQQAQREVTLSGFRSGKFMTLVATNV 362
G + IIF TK QL++ L GA A+HGD QA+R+ L+ FRSG+ LVAT+V
Sbjct: 473 PGSKIIIFCSTKRMCDQLARNLTRTFGAAAIHGDKSQAERDDVLNQFRSGRTPVLVATDV 532
Query: 363 AARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLY 407
AARGLD+ D+++++ + P VE Y+HR GRTGRAG TG+A +
Sbjct: 533 AARGLDVKDIRVVVNYDFPNGVEDYVHRIGRTGRAGATGLAYTFF 577
>AT3G01540.4 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 |
chr3:213077-216142 REVERSE LENGTH=619
Length = 619
Score = 229 bits (583), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 136/363 (37%), Positives = 205/363 (56%), Gaps = 17/363 (4%)
Query: 52 PNAVSKFRISGPLREMLKE---KGIVSLFPIQAMTFDTVLDGSDLVGRARTGQGKTLAFV 108
P + F +G E+L+E G + PIQA ++ + G D+V A+TG GKTL ++
Sbjct: 154 PPPLMSFEATGFPPELLREVLSAGFSAPTPIQAQSWPIAMQGRDIVAIAKTGSGKTLGYL 213
Query: 109 LPILESLTNGPTKASRKTGYGRPPSVIVLLPTRELACQVHADFEVYGGAMGLTSCCLYGG 168
+P L + + G P+++VL PTRELA Q+ + +G + ++ CLYGG
Sbjct: 214 IPGFLHLQR--IRNDSRMG----PTILVLSPTRELATQIQEEAVKFGRSSRISCTCLYGG 267
Query: 169 APYQGQEMKLKRGVDVVIGTPGRIKDHIERGNIDLSQLKFRVLDEADEMLRMGFVEDVEL 228
AP Q L+RG D+V+ TPGR+ D +E I L Q+ + VLDEAD ML MGF +
Sbjct: 268 APKGPQLRDLERGADIVVATPGRLNDILEMRRISLRQISYLVLDEADRMLDMGFEPQIRK 327
Query: 229 ILGKVKNVGQVQTLLFSATLPDWVKQIAAKFLKRDKKTADLVGNT-KMKASTSVRHIVLP 287
I+ ++ + QTL+++AT P V++IAA L + +GN ++ A+ S+ +
Sbjct: 328 IVKEIPT--KRQTLMYTATWPKGVRKIAADLLVNPAQVN--IGNVDELVANKSITQHIEV 383
Query: 288 CTSSARSQLIPDIIRCYSSGGRTIIFTETKESASQLSQLLP---GARALHGDIQQAQREV 344
+ + + I+R G + IIF TK QL++ L GA A+HGD Q +R+
Sbjct: 384 VAPMEKQRRLEQILRSQEPGSKVIIFCSTKRMCDQLTRNLTRQFGAAAIHGDKSQPERDN 443
Query: 345 TLSGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAV 404
L+ FRSG+ LVAT+VAARGLD+ D++ ++ + P VE Y+HR GRTGRAG TG A
Sbjct: 444 VLNQFRSGRTPVLVATDVAARGLDVKDIRAVVNYDFPNGVEDYVHRIGRTGRAGATGQAF 503
Query: 405 MLY 407
+
Sbjct: 504 TFF 506
>AT3G01540.3 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 |
chr3:213077-216142 REVERSE LENGTH=619
Length = 619
Score = 229 bits (583), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 136/363 (37%), Positives = 205/363 (56%), Gaps = 17/363 (4%)
Query: 52 PNAVSKFRISGPLREMLKE---KGIVSLFPIQAMTFDTVLDGSDLVGRARTGQGKTLAFV 108
P + F +G E+L+E G + PIQA ++ + G D+V A+TG GKTL ++
Sbjct: 154 PPPLMSFEATGFPPELLREVLSAGFSAPTPIQAQSWPIAMQGRDIVAIAKTGSGKTLGYL 213
Query: 109 LPILESLTNGPTKASRKTGYGRPPSVIVLLPTRELACQVHADFEVYGGAMGLTSCCLYGG 168
+P L + + G P+++VL PTRELA Q+ + +G + ++ CLYGG
Sbjct: 214 IPGFLHLQR--IRNDSRMG----PTILVLSPTRELATQIQEEAVKFGRSSRISCTCLYGG 267
Query: 169 APYQGQEMKLKRGVDVVIGTPGRIKDHIERGNIDLSQLKFRVLDEADEMLRMGFVEDVEL 228
AP Q L+RG D+V+ TPGR+ D +E I L Q+ + VLDEAD ML MGF +
Sbjct: 268 APKGPQLRDLERGADIVVATPGRLNDILEMRRISLRQISYLVLDEADRMLDMGFEPQIRK 327
Query: 229 ILGKVKNVGQVQTLLFSATLPDWVKQIAAKFLKRDKKTADLVGNT-KMKASTSVRHIVLP 287
I+ ++ + QTL+++AT P V++IAA L + +GN ++ A+ S+ +
Sbjct: 328 IVKEIPT--KRQTLMYTATWPKGVRKIAADLLVNPAQVN--IGNVDELVANKSITQHIEV 383
Query: 288 CTSSARSQLIPDIIRCYSSGGRTIIFTETKESASQLSQLLP---GARALHGDIQQAQREV 344
+ + + I+R G + IIF TK QL++ L GA A+HGD Q +R+
Sbjct: 384 VAPMEKQRRLEQILRSQEPGSKVIIFCSTKRMCDQLTRNLTRQFGAAAIHGDKSQPERDN 443
Query: 345 TLSGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAV 404
L+ FRSG+ LVAT+VAARGLD+ D++ ++ + P VE Y+HR GRTGRAG TG A
Sbjct: 444 VLNQFRSGRTPVLVATDVAARGLDVKDIRAVVNYDFPNGVEDYVHRIGRTGRAGATGQAF 503
Query: 405 MLY 407
+
Sbjct: 504 TFF 506
>AT3G01540.2 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 |
chr3:213077-216142 REVERSE LENGTH=619
Length = 619
Score = 229 bits (583), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 136/363 (37%), Positives = 205/363 (56%), Gaps = 17/363 (4%)
Query: 52 PNAVSKFRISGPLREMLKE---KGIVSLFPIQAMTFDTVLDGSDLVGRARTGQGKTLAFV 108
P + F +G E+L+E G + PIQA ++ + G D+V A+TG GKTL ++
Sbjct: 154 PPPLMSFEATGFPPELLREVLSAGFSAPTPIQAQSWPIAMQGRDIVAIAKTGSGKTLGYL 213
Query: 109 LPILESLTNGPTKASRKTGYGRPPSVIVLLPTRELACQVHADFEVYGGAMGLTSCCLYGG 168
+P L + + G P+++VL PTRELA Q+ + +G + ++ CLYGG
Sbjct: 214 IPGFLHLQR--IRNDSRMG----PTILVLSPTRELATQIQEEAVKFGRSSRISCTCLYGG 267
Query: 169 APYQGQEMKLKRGVDVVIGTPGRIKDHIERGNIDLSQLKFRVLDEADEMLRMGFVEDVEL 228
AP Q L+RG D+V+ TPGR+ D +E I L Q+ + VLDEAD ML MGF +
Sbjct: 268 APKGPQLRDLERGADIVVATPGRLNDILEMRRISLRQISYLVLDEADRMLDMGFEPQIRK 327
Query: 229 ILGKVKNVGQVQTLLFSATLPDWVKQIAAKFLKRDKKTADLVGNT-KMKASTSVRHIVLP 287
I+ ++ + QTL+++AT P V++IAA L + +GN ++ A+ S+ +
Sbjct: 328 IVKEIPT--KRQTLMYTATWPKGVRKIAADLLVNPAQVN--IGNVDELVANKSITQHIEV 383
Query: 288 CTSSARSQLIPDIIRCYSSGGRTIIFTETKESASQLSQLLP---GARALHGDIQQAQREV 344
+ + + I+R G + IIF TK QL++ L GA A+HGD Q +R+
Sbjct: 384 VAPMEKQRRLEQILRSQEPGSKVIIFCSTKRMCDQLTRNLTRQFGAAAIHGDKSQPERDN 443
Query: 345 TLSGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAV 404
L+ FRSG+ LVAT+VAARGLD+ D++ ++ + P VE Y+HR GRTGRAG TG A
Sbjct: 444 VLNQFRSGRTPVLVATDVAARGLDVKDIRAVVNYDFPNGVEDYVHRIGRTGRAGATGQAF 503
Query: 405 MLY 407
+
Sbjct: 504 TFF 506
>AT3G01540.1 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 |
chr3:213077-216142 REVERSE LENGTH=618
Length = 618
Score = 229 bits (583), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 136/363 (37%), Positives = 205/363 (56%), Gaps = 17/363 (4%)
Query: 52 PNAVSKFRISGPLREMLKE---KGIVSLFPIQAMTFDTVLDGSDLVGRARTGQGKTLAFV 108
P + F +G E+L+E G + PIQA ++ + G D+V A+TG GKTL ++
Sbjct: 154 PPPLMSFEATGFPPELLREVLSAGFSAPTPIQAQSWPIAMQGRDIVAIAKTGSGKTLGYL 213
Query: 109 LPILESLTNGPTKASRKTGYGRPPSVIVLLPTRELACQVHADFEVYGGAMGLTSCCLYGG 168
+P L + + G P+++VL PTRELA Q+ + +G + ++ CLYGG
Sbjct: 214 IPGFLHLQR--IRNDSRMG----PTILVLSPTRELATQIQEEAVKFGRSSRISCTCLYGG 267
Query: 169 APYQGQEMKLKRGVDVVIGTPGRIKDHIERGNIDLSQLKFRVLDEADEMLRMGFVEDVEL 228
AP Q L+RG D+V+ TPGR+ D +E I L Q+ + VLDEAD ML MGF +
Sbjct: 268 APKGPQLRDLERGADIVVATPGRLNDILEMRRISLRQISYLVLDEADRMLDMGFEPQIRK 327
Query: 229 ILGKVKNVGQVQTLLFSATLPDWVKQIAAKFLKRDKKTADLVGNT-KMKASTSVRHIVLP 287
I+ ++ + QTL+++AT P V++IAA L + +GN ++ A+ S+ +
Sbjct: 328 IVKEIPT--KRQTLMYTATWPKGVRKIAADLLVNPAQVN--IGNVDELVANKSITQHIEV 383
Query: 288 CTSSARSQLIPDIIRCYSSGGRTIIFTETKESASQLSQLLP---GARALHGDIQQAQREV 344
+ + + I+R G + IIF TK QL++ L GA A+HGD Q +R+
Sbjct: 384 VAPMEKQRRLEQILRSQEPGSKVIIFCSTKRMCDQLTRNLTRQFGAAAIHGDKSQPERDN 443
Query: 345 TLSGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAV 404
L+ FRSG+ LVAT+VAARGLD+ D++ ++ + P VE Y+HR GRTGRAG TG A
Sbjct: 444 VLNQFRSGRTPVLVATDVAARGLDVKDIRAVVNYDFPNGVEDYVHRIGRTGRAGATGQAF 503
Query: 405 MLY 407
+
Sbjct: 504 TFF 506
>AT1G31970.1 | Symbols: STRS1 | DEA(D/H)-box RNA helicase family
protein | chr1:11479921-11482707 FORWARD LENGTH=537
Length = 537
Score = 226 bits (575), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 139/341 (40%), Positives = 195/341 (57%), Gaps = 16/341 (4%)
Query: 78 PIQAMTFDTVLDGSDLVGRARTGQGKTLAFVLPILESLTNGPTKASRKTGYGRP---PSV 134
PIQ+ T+ +LDG DL+G A+TG GKTLAF +P + + K ++K G G P+
Sbjct: 139 PIQSHTWPFLLDGRDLIGIAKTGSGKTLAFGIPAIMHVL----KKNKKIGGGSKKVNPTC 194
Query: 135 IVLLPTRELACQVHADFEVYGGAMGLTSCCLYGGAPYQGQEMKLKRGVDVVIGTPGRIKD 194
+VL PTRELA Q+ G GL S C+YGG+ Q ++ GVD+VIGTPGR++D
Sbjct: 195 LVLSPTRELAVQISDVLREAGEPCGLKSICVYGGSSKGPQISAIRSGVDIVIGTPGRLRD 254
Query: 195 HIERGNIDLSQLKFRVLDEADEMLRMGFVEDVELILGKVKNVGQVQTLLFSATLPDWVKQ 254
IE + LS + F VLDEAD ML MGF E V IL V Q+ ++FSAT P V +
Sbjct: 255 LIESNVLRLSDVSFVVLDEADRMLDMGFEEPVRFILSNTNKVRQM--VMFSATWPLDVHK 312
Query: 255 IAAKFLKRDKKTADLVGNTKMKASTSVRHIVLPCTSSARSQLIPDIIRCY--SSGGRTII 312
+A +F+ + ++G+ + A+ V I+ AR Q + ++ Y S R ++
Sbjct: 313 LAQEFMDPNPIKV-IIGSVDLAANHDVMQIIEVLDERARDQRLIALLEKYHKSQKNRVLV 371
Query: 313 FTETKESASQLSQLLP----GARALHGDIQQAQREVTLSGFRSGKFMTLVATNVAARGLD 368
F K A +L + L A ++HG+ Q++R +LS F+ G LVAT+VAARGLD
Sbjct: 372 FALYKVEAERLERFLQQRGWKAVSIHGNKAQSERTRSLSLFKEGSCPLLVATDVAARGLD 431
Query: 369 INDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLYDP 409
I DV+++I P E Y+HR GRTGRAG GVA + P
Sbjct: 432 IPDVEVVINYTFPLTTEDYVHRIGRTGRAGKKGVAHTFFTP 472
>AT3G06480.1 | Symbols: | DEAD box RNA helicase family protein |
chr3:1985697-1989666 REVERSE LENGTH=1088
Length = 1088
Score = 224 bits (572), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 133/347 (38%), Positives = 199/347 (57%), Gaps = 13/347 (3%)
Query: 64 LREMLKEKGIVSLFPIQAMTFDTVLDGSDLVGRARTGQGKTLAFVLPILESLTNGPTKAS 123
LRE+L G S PIQA T+ L D+V A+TG GKTL +++P L + +
Sbjct: 447 LRELLS-AGFPSPTPIQAQTWPIALQSRDIVAIAKTGSGKTLGYLIPAFILLRH--CRND 503
Query: 124 RKTGYGRPPSVIVLLPTRELACQVHADFEVYGGAMGLTSCCLYGGAPYQGQEMKLKRGVD 183
+ G P+V++L PTRELA Q+ + +G + ++ CLYGGAP Q +L+RG D
Sbjct: 504 SRNG----PTVLILAPTRELATQIQDEALRFGRSSRISCTCLYGGAPKGPQLKELERGAD 559
Query: 184 VVIGTPGRIKDHIERGNIDLSQLKFRVLDEADEMLRMGFVEDVELILGKVKNVGQVQTLL 243
+V+ TPGR+ D +E ID Q+ VLDEAD ML MGF + I+ ++ + QTL+
Sbjct: 560 IVVATPGRLNDILEMKMIDFQQVSLLVLDEADRMLDMGFEPQIRKIVNEIP--PRRQTLM 617
Query: 244 FSATLPDWVKQIAAKFLKRDKKTADLVGNTKMKASTSVRHIVLPCTSSARSQLIPDIIRC 303
++AT P V++IA+ L + ++ ++ A+ ++ V + + + I+R
Sbjct: 618 YTATWPKEVRKIASDLLV-NPVQVNIGRVDELAANKAITQYVEVVPQMEKERRLEQILRS 676
Query: 304 YSSGGRTIIFTETKESASQLSQLLP---GARALHGDIQQAQREVTLSGFRSGKFMTLVAT 360
G + IIF TK L++ + GA +HGD Q +R+ L+ FRSGK L+AT
Sbjct: 677 QERGSKVIIFCSTKRLCDHLARSVGRHFGAVVIHGDKTQGERDWVLNQFRSGKSCVLIAT 736
Query: 361 NVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLY 407
+VAARGLDI D++++I + P VE Y+HR GRTGRAG TGVA +
Sbjct: 737 DVAARGLDIKDIRVVINYDFPTGVEDYVHRIGRTGRAGATGVAFTFF 783
>AT3G58570.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:21657099-21660352
FORWARD LENGTH=646
Length = 646
Score = 218 bits (554), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 128/343 (37%), Positives = 185/343 (53%), Gaps = 15/343 (4%)
Query: 78 PIQAMTFDTVLDGSDLVGRARTGQGKTLAFVLPILESLTNGPTKASRKTGYGRPPSVIVL 137
P+Q + G DL+ A+TG GKT AF PI+ + + G P ++L
Sbjct: 171 PVQRNAIPILAAGRDLMACAQTGSGKTAAFCFPIISGIMKDQHIERPRGVRGVYPLAVIL 230
Query: 138 LPTRELACQVHADFEVYGGAMGLTSCCLYGGAPYQGQEMKLKRGVDVVIGTPGRIKDHIE 197
PTRELACQ+H + + G+ YGG P Q +L+RGVD+++ TPGR+ D +E
Sbjct: 231 SPTRELACQIHDEARKFSYQTGVKVVVAYGGTPVNQQIRELERGVDILVATPGRLNDLLE 290
Query: 198 RGNIDLSQLKFRVLDEADEMLRMGFVEDVELILGKVK--NVGQVQTLLFSATLPDWVKQI 255
RG + L ++F LDEAD ML MGF + I+ ++ G QT+LFSAT P ++++
Sbjct: 291 RGRVSLQMVRFLALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPREIQRL 350
Query: 256 AAKFLKRDKKTADLVGNTKMKASTSVRHIVLPCTSSARSQLIPDIIRCYSSGGR------ 309
A+ FL A VG V+ + S RS L+ D++ G
Sbjct: 351 ASDFLSNYIFLA--VGRVGSSTDLIVQRVEFVHDSDKRSHLM-DLLHAQRENGNQGKQAL 407
Query: 310 TIIFTETKESASQLSQLLP----GARALHGDIQQAQREVTLSGFRSGKFMTLVATNVAAR 365
T++F ETK+ A L L A +HGD Q +REV L F++G+ LVAT+VAAR
Sbjct: 408 TLVFVETKKGADSLENWLCINGFPATTIHGDRSQQEREVALRSFKTGRTPILVATDVAAR 467
Query: 366 GLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLYD 408
GLDI V ++ + P D++ Y+HR GRTGRAGN+G+A ++
Sbjct: 468 GLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGNSGLATAFFN 510
>AT2G42520.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:17705382-17708744
FORWARD LENGTH=633
Length = 633
Score = 214 bits (546), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 127/343 (37%), Positives = 184/343 (53%), Gaps = 15/343 (4%)
Query: 78 PIQAMTFDTVLDGSDLVGRARTGQGKTLAFVLPILESLTNGPTKASRKTGYGRPPSVIVL 137
P+Q +L+G DL+ A+TG GKT AF PI+ + + P ++L
Sbjct: 184 PVQRHAIPILLEGRDLMACAQTGSGKTAAFCFPIISGIMKDQHVQRPRGSRTVYPLAVIL 243
Query: 138 LPTRELACQVHADFEVYGGAMGLTSCCLYGGAPYQGQEMKLKRGVDVVIGTPGRIKDHIE 197
PTRELA Q+H + + + G+ YGG P Q +L+RGVD+++ TPGR+ D +E
Sbjct: 244 SPTRELASQIHDEAKKFSYQTGVKVVVAYGGTPINQQLRELERGVDILVATPGRLNDLLE 303
Query: 198 RGNIDLSQLKFRVLDEADEMLRMGFVEDVELILGKVK--NVGQVQTLLFSATLPDWVKQI 255
R + + ++F LDEAD ML MGF + I+ ++ G QTLLFSAT P ++++
Sbjct: 304 RARVSMQMIRFLALDEADRMLDMGFEPQIRKIVEQMDMPPRGVRQTLLFSATFPREIQRL 363
Query: 256 AAKFLKRDKKTADLVGNTKMKASTSVRHIVLPCTSSARSQLIPDIIRCYSSGG------R 309
AA FL A VG V+ + S RS L+ D++ G
Sbjct: 364 AADFLANYIFLA--VGRVGSSTDLIVQRVEFVLDSDKRSHLM-DLLHAQRENGIQGKQAL 420
Query: 310 TIIFTETKESASQLSQLLP----GARALHGDIQQAQREVTLSGFRSGKFMTLVATNVAAR 365
T++F ETK A L L A ++HGD Q +REV L F+SG+ LVAT+VAAR
Sbjct: 421 TLVFVETKRGADSLENWLCINGFPATSIHGDRTQQEREVALKAFKSGRTPILVATDVAAR 480
Query: 366 GLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLYD 408
GLDI V ++ + P D++ Y+HR GRTGRAG +G+A ++
Sbjct: 481 GLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFN 523
>AT3G58510.3 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:21640608-21643464 FORWARD LENGTH=612
Length = 612
Score = 209 bits (531), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 121/341 (35%), Positives = 180/341 (52%), Gaps = 13/341 (3%)
Query: 78 PIQAMTFDTVLDGSDLVGRARTGQGKTLAFVLPILESLTNGPTKASRKTGYGRPPSVIVL 137
P+Q +L DL+ A+TG GKT AF PI+ + + P ++L
Sbjct: 176 PVQRHAIPILLAERDLMACAQTGSGKTAAFCFPIISGIMKDQHVERPRGSRAVYPFAVIL 235
Query: 138 LPTRELACQVHADFEVYGGAMGLTSCCLYGGAPYQGQEMKLKRGVDVVIGTPGRIKDHIE 197
PTRELACQ+H + + + G+ YGG P Q +L+RG D+++ TPGR+ D +E
Sbjct: 236 SPTRELACQIHDEAKKFSYQTGVKVVVAYGGTPIHQQLRELERGCDILVATPGRLNDLLE 295
Query: 198 RGNIDLSQLKFRVLDEADEMLRMGFVEDVELILGKVK--NVGQVQTLLFSATLPDWVKQI 255
R + + ++F LDEAD ML MGF + I+ ++ G QT+LFSAT P ++++
Sbjct: 296 RARVSMQMIRFLALDEADRMLDMGFEPQIRKIVEQMDMPPRGVRQTMLFSATFPSQIQRL 355
Query: 256 AAKFLKRDKKTADLVGNTKMKASTSVRHIVLPCTSSARSQLIPDIIRC----YSSGGRTI 311
AA F+ A VG + + S RS L+ D++ T+
Sbjct: 356 AADFMSNYIFLA--VGRVGSSTDLITQRVEFVQESDKRSHLM-DLLHAQRETQDKQSLTL 412
Query: 312 IFTETKESASQLSQLLP----GARALHGDIQQAQREVTLSGFRSGKFMTLVATNVAARGL 367
+F ETK A L L A ++HGD Q +REV L F++G+ LVAT+VAARGL
Sbjct: 413 VFVETKRGADTLENWLCMNEFPATSIHGDRTQQEREVALRSFKTGRTPILVATDVAARGL 472
Query: 368 DINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLYD 408
DI V ++ + P D++ Y+HR GRTGRAG +G+A ++
Sbjct: 473 DIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGIATAFFN 513
>AT3G58510.2 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:21640608-21643464 FORWARD LENGTH=612
Length = 612
Score = 209 bits (531), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 121/341 (35%), Positives = 180/341 (52%), Gaps = 13/341 (3%)
Query: 78 PIQAMTFDTVLDGSDLVGRARTGQGKTLAFVLPILESLTNGPTKASRKTGYGRPPSVIVL 137
P+Q +L DL+ A+TG GKT AF PI+ + + P ++L
Sbjct: 176 PVQRHAIPILLAERDLMACAQTGSGKTAAFCFPIISGIMKDQHVERPRGSRAVYPFAVIL 235
Query: 138 LPTRELACQVHADFEVYGGAMGLTSCCLYGGAPYQGQEMKLKRGVDVVIGTPGRIKDHIE 197
PTRELACQ+H + + + G+ YGG P Q +L+RG D+++ TPGR+ D +E
Sbjct: 236 SPTRELACQIHDEAKKFSYQTGVKVVVAYGGTPIHQQLRELERGCDILVATPGRLNDLLE 295
Query: 198 RGNIDLSQLKFRVLDEADEMLRMGFVEDVELILGKVK--NVGQVQTLLFSATLPDWVKQI 255
R + + ++F LDEAD ML MGF + I+ ++ G QT+LFSAT P ++++
Sbjct: 296 RARVSMQMIRFLALDEADRMLDMGFEPQIRKIVEQMDMPPRGVRQTMLFSATFPSQIQRL 355
Query: 256 AAKFLKRDKKTADLVGNTKMKASTSVRHIVLPCTSSARSQLIPDIIRC----YSSGGRTI 311
AA F+ A VG + + S RS L+ D++ T+
Sbjct: 356 AADFMSNYIFLA--VGRVGSSTDLITQRVEFVQESDKRSHLM-DLLHAQRETQDKQSLTL 412
Query: 312 IFTETKESASQLSQLLP----GARALHGDIQQAQREVTLSGFRSGKFMTLVATNVAARGL 367
+F ETK A L L A ++HGD Q +REV L F++G+ LVAT+VAARGL
Sbjct: 413 VFVETKRGADTLENWLCMNEFPATSIHGDRTQQEREVALRSFKTGRTPILVATDVAARGL 472
Query: 368 DINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLYD 408
DI V ++ + P D++ Y+HR GRTGRAG +G+A ++
Sbjct: 473 DIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGIATAFFN 513
>AT3G58510.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:21640608-21643464 FORWARD LENGTH=612
Length = 612
Score = 209 bits (531), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 121/341 (35%), Positives = 180/341 (52%), Gaps = 13/341 (3%)
Query: 78 PIQAMTFDTVLDGSDLVGRARTGQGKTLAFVLPILESLTNGPTKASRKTGYGRPPSVIVL 137
P+Q +L DL+ A+TG GKT AF PI+ + + P ++L
Sbjct: 176 PVQRHAIPILLAERDLMACAQTGSGKTAAFCFPIISGIMKDQHVERPRGSRAVYPFAVIL 235
Query: 138 LPTRELACQVHADFEVYGGAMGLTSCCLYGGAPYQGQEMKLKRGVDVVIGTPGRIKDHIE 197
PTRELACQ+H + + + G+ YGG P Q +L+RG D+++ TPGR+ D +E
Sbjct: 236 SPTRELACQIHDEAKKFSYQTGVKVVVAYGGTPIHQQLRELERGCDILVATPGRLNDLLE 295
Query: 198 RGNIDLSQLKFRVLDEADEMLRMGFVEDVELILGKVK--NVGQVQTLLFSATLPDWVKQI 255
R + + ++F LDEAD ML MGF + I+ ++ G QT+LFSAT P ++++
Sbjct: 296 RARVSMQMIRFLALDEADRMLDMGFEPQIRKIVEQMDMPPRGVRQTMLFSATFPSQIQRL 355
Query: 256 AAKFLKRDKKTADLVGNTKMKASTSVRHIVLPCTSSARSQLIPDIIRC----YSSGGRTI 311
AA F+ A VG + + S RS L+ D++ T+
Sbjct: 356 AADFMSNYIFLA--VGRVGSSTDLITQRVEFVQESDKRSHLM-DLLHAQRETQDKQSLTL 412
Query: 312 IFTETKESASQLSQLLP----GARALHGDIQQAQREVTLSGFRSGKFMTLVATNVAARGL 367
+F ETK A L L A ++HGD Q +REV L F++G+ LVAT+VAARGL
Sbjct: 413 VFVETKRGADTLENWLCMNEFPATSIHGDRTQQEREVALRSFKTGRTPILVATDVAARGL 472
Query: 368 DINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLYD 408
DI V ++ + P D++ Y+HR GRTGRAG +G+A ++
Sbjct: 473 DIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGIATAFFN 513
>AT5G63120.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:25319798-25322071
REVERSE LENGTH=484
Length = 484
Score = 195 bits (495), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 114/306 (37%), Positives = 178/306 (58%), Gaps = 13/306 (4%)
Query: 66 EMLKEKGIVSLFPIQAMTFDTVLDGSDLVGRARTGQGKTLAFVLPILESLTNGPTKASRK 125
E + + G PIQA + L G DL+G A TG GKTLA++LP L ++ P +
Sbjct: 178 EAIAKLGFTEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPALVHVSAQP-----R 232
Query: 126 TGYGRPPSVIVLLPTRELACQVHADFEVYGGAMGLTSCCLYGGAPYQGQEMKLKRGVDVV 185
G P V++L PTRELA Q+ + +G G+ S C+YGGAP Q L+RGV++V
Sbjct: 233 LGQDDGPIVLILAPTRELAVQIQEESRKFGLRSGVRSTCIYGGAPKGPQIRDLRRGVEIV 292
Query: 186 IGTPGRIKDHIERGNIDLSQLKFRVLDEADEMLRMGFVEDVELILGKVKNVGQVQTLLFS 245
I TPGR+ D +E + +L ++ + VLDEAD ML MGF + I+ +++ QTLL+S
Sbjct: 293 IATPGRLIDMLECQHTNLKRVTYLVLDEADRMLDMGFEPQIRKIVSQIRP--DRQTLLWS 350
Query: 246 ATLPDWVKQIAAKFLKRDKKTADLVGNTKMKASTSVRHIVLPCTSSARSQLIPDIIRCYS 305
AT P V+ +A +FL+ K ++G+T +KA+ S+ ++ + + + +++
Sbjct: 351 ATWPREVETLARQFLRDPYKA--IIGSTDLKANQSINQVIEIVPTPEKYNRLLTLLKQLM 408
Query: 306 SGGRTIIFTETKESASQLSQLLP----GARALHGDIQQAQREVTLSGFRSGKFMTLVATN 361
G + +IF ETK Q+++ L A A+HGD Q++R+ L+ F+SG+ + AT+
Sbjct: 409 DGSKILIFVETKRGCDQVTRQLRMDGWPALAIHGDKTQSERDRVLAEFKSGRSPIMTATD 468
Query: 362 VAARGL 367
VAARGL
Sbjct: 469 VAARGL 474
>AT1G20920.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:7285342-7288842
FORWARD LENGTH=1166
Length = 1166
Score = 191 bits (486), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 115/337 (34%), Positives = 184/337 (54%), Gaps = 17/337 (5%)
Query: 77 FPIQAMTFDTVLDGSDLVGRARTGQGKTLAFVLPILESLTNGPTKASRKTGYGRPPSVIV 136
PIQ ++ G D +G A+TG GKTL FVLP+L + + P + G P +V
Sbjct: 553 MPIQTQALPIIMSGRDCIGVAKTGSGKTLGFVLPMLRHIKDQPPVEA-----GDGPIGLV 607
Query: 137 LLPTRELACQVHADFEVYGGAMGLTSCCLYGGAPYQGQEMKLKRGVDVVIGTPGRIKDHI 196
+ PTREL Q+H+D + +G+ +YGG+ Q +LKRG ++V+ TPGR+ D +
Sbjct: 608 MAPTRELVQQIHSDIRKFSKPLGIRCVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDIL 667
Query: 197 --ERGNI-DLSQLKFRVLDEADEMLRMGFVEDVELILGKVKNVGQVQTLLFSATLPDWVK 253
G I +L ++ F V+DEAD M MGF + I+ ++ + QT+LFSAT P V+
Sbjct: 668 CTSSGKITNLRRVTFLVMDEADRMFDMGFEPQITRIIQNIRP--ERQTVLFSATFPRQVE 725
Query: 254 QIAAKFLKRDKKTADLVGNTKMKASTSVRHIVLPCTSSARSQLIPDIIRCYSSGGRTIIF 313
+A K L K ++ + + + +V S R + +++ +S G+ ++F
Sbjct: 726 TLARKVLN---KPVEIQVGGRSVVNKDITQLVEVRPESDRFLRLLELLGEWSEKGKILVF 782
Query: 314 TETKESASQLSQLLPGAR----ALHGDIQQAQREVTLSGFRSGKFMTLVATNVAARGLDI 369
+++E L + + + +LHG Q RE T+S F++ L+AT+VAARGLD+
Sbjct: 783 VQSQEKCDALYRDMIKSSYPCLSLHGGKDQTDRESTISDFKNDVCNLLIATSVAARGLDV 842
Query: 370 NDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVML 406
+++L++ + P E Y+HR GRTGRAG G AV
Sbjct: 843 KELELVVNFDAPNHYEDYVHRVGRTGRAGRKGCAVTF 879
>AT1G20920.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:7286356-7288842
FORWARD LENGTH=828
Length = 828
Score = 191 bits (486), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 115/337 (34%), Positives = 184/337 (54%), Gaps = 17/337 (5%)
Query: 77 FPIQAMTFDTVLDGSDLVGRARTGQGKTLAFVLPILESLTNGPTKASRKTGYGRPPSVIV 136
PIQ ++ G D +G A+TG GKTL FVLP+L + + P + G P +V
Sbjct: 215 MPIQTQALPIIMSGRDCIGVAKTGSGKTLGFVLPMLRHIKDQPPVEA-----GDGPIGLV 269
Query: 137 LLPTRELACQVHADFEVYGGAMGLTSCCLYGGAPYQGQEMKLKRGVDVVIGTPGRIKDHI 196
+ PTREL Q+H+D + +G+ +YGG+ Q +LKRG ++V+ TPGR+ D +
Sbjct: 270 MAPTRELVQQIHSDIRKFSKPLGIRCVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDIL 329
Query: 197 --ERGNI-DLSQLKFRVLDEADEMLRMGFVEDVELILGKVKNVGQVQTLLFSATLPDWVK 253
G I +L ++ F V+DEAD M MGF + I+ ++ + QT+LFSAT P V+
Sbjct: 330 CTSSGKITNLRRVTFLVMDEADRMFDMGFEPQITRIIQNIRP--ERQTVLFSATFPRQVE 387
Query: 254 QIAAKFLKRDKKTADLVGNTKMKASTSVRHIVLPCTSSARSQLIPDIIRCYSSGGRTIIF 313
+A K L K ++ + + + +V S R + +++ +S G+ ++F
Sbjct: 388 TLARKVLN---KPVEIQVGGRSVVNKDITQLVEVRPESDRFLRLLELLGEWSEKGKILVF 444
Query: 314 TETKESASQLSQLLPGAR----ALHGDIQQAQREVTLSGFRSGKFMTLVATNVAARGLDI 369
+++E L + + + +LHG Q RE T+S F++ L+AT+VAARGLD+
Sbjct: 445 VQSQEKCDALYRDMIKSSYPCLSLHGGKDQTDRESTISDFKNDVCNLLIATSVAARGLDV 504
Query: 370 NDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVML 406
+++L++ + P E Y+HR GRTGRAG G AV
Sbjct: 505 KELELVVNFDAPNHYEDYVHRVGRTGRAGRKGCAVTF 541
>AT5G51280.1 | Symbols: | DEAD-box protein abstrakt, putative |
chr5:20841456-20843645 FORWARD LENGTH=591
Length = 591
Score = 186 bits (473), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 129/374 (34%), Positives = 190/374 (50%), Gaps = 27/374 (7%)
Query: 46 IVKKED-PNAVSKFR---ISGPLREMLKEKGIVSLFPIQAMTFDTVLDGSDLVGRARTGQ 101
IV +D P + F+ P+ + LKEKGIV PIQ +L G D++G A TG
Sbjct: 135 IVNGDDIPPPIKNFKDMKFPRPVLDTLKEKGIVQPTPIQVQGLPVILAGRDMIGIAFTGS 194
Query: 102 GKTLAFVLPILESLTNGPTKASRKTGYGRPPSVIVLLPTRELACQVHADFE------VYG 155
GKTL FVLP++ G G P +++ P+RELA Q + E V
Sbjct: 195 GKTLVFVLPMIMIALQEEMMMPIAAGEG--PIGLIVCPSRELARQTYEVVEQFVAPLVEA 252
Query: 156 GAMGLTSCCLYGGAPYQGQEMKLKRGVDVVIGTPGRIKDHIERGNIDLSQLKFRVLDEAD 215
G L S GG + Q +KRGV +V+ TPGR+KD + + + L ++ LDEAD
Sbjct: 253 GYPPLRSLLCIGGIDMRSQLEVVKRGVHIVVATPGRLKDMLAKKKMSLDACRYLTLDEAD 312
Query: 216 EMLRMGFVEDVELILGKVKNVGQVQTLLFSATLPDWVKQIA-AKFLKRDKKTADLVGNTK 274
++ +GF +D+ + K+ Q QTLLFSAT+P ++ A + +K G
Sbjct: 313 RLVDLGFEDDIREVFDHFKS--QRQTLLFSATMPTKIQIFARSALVKPVTVNVGRAGAAN 370
Query: 275 MKASTSVRHIVLPCTSSARSQLIPDIIRCYS-SGGRTIIFTETKESASQLSQ--LLPG-- 329
+ V ++ + I ++ C + +IF E K + + LL G
Sbjct: 371 LDVIQEVEYV-------KQEAKIVYLLECLQKTSPPVLIFCENKADVDDIHEYLLLKGVE 423
Query: 330 ARALHGDIQQAQREVTLSGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIH 389
A A+HG Q RE +S F++GK LVAT+VA++GLD D+Q +I + P ++E Y+H
Sbjct: 424 AVAIHGGKDQEDREYAISSFKAGKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYVH 483
Query: 390 RSGRTGRAGNTGVA 403
R GRTGR G TG+A
Sbjct: 484 RIGRTGRCGKTGIA 497
>AT2G33730.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:14265679-14267880
REVERSE LENGTH=733
Length = 733
Score = 185 bits (470), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 136/400 (34%), Positives = 200/400 (50%), Gaps = 62/400 (15%)
Query: 49 KEDPNAVSK-FRISGPLR---------EMLK---EKGIVSLFPIQAMTFDTVLDGSDLVG 95
+ED N K RI P+R E+LK G PIQ L D++G
Sbjct: 296 REDFNISYKGSRIPRPMRSWEESKLTSELLKAVERAGYKKPSPIQMAAIPLGLQQRDVIG 355
Query: 96 RARTGQGKTLAFVLPILESLTNGPTKASRKTGYGRPPSVIVLLPTRELACQVHADFEVYG 155
A TG GKT AFVLP+L ++ P + G P +V+ PTRELA Q+ + +
Sbjct: 356 IAETGSGKTAAFVLPMLAYISRLPPMSEENETEG--PYAVVMAPTRELAQQIEEETVKFA 413
Query: 156 GAMGLTSCCLYGGAPYQGQEMKLKRGVDVVIGTPGRIKDHIERGNIDLSQLKFRVLDEAD 215
+G + GG + Q +K+ +G ++VI TPGR+ D +ER L+Q + VLDEAD
Sbjct: 414 HYLGFRVTSIVGGQSIEEQGLKITQGCEIVIATPGRLIDCLERRYAVLNQCNYVVLDEAD 473
Query: 216 EMLRMGFVEDVELILGKV----------------KNVGQVQTLLFSATLPDWVKQIAAKF 259
M+ MGF V +L + K + + T +FSAT+P V+++A K+
Sbjct: 474 RMIDMGFEPQVAGVLDAMPSSNLKPENEEEELDEKKIYRT-TYMFSATMPPGVERLARKY 532
Query: 260 LKRD--------KKTADLVGNTKMKASTSVRHIVLPCTSSA--RSQLIPDIIRCYSSGGR 309
L+ KT DL+ +H+++ S R Q + D + G +
Sbjct: 533 LRNPVVVTIGTAGKTTDLIS----------QHVIMMKESEKFFRLQKLLDEL-----GEK 577
Query: 310 T-IIFTETKESASQLSQLLPGA----RALHGDIQQAQREVTLSGFRSGKFMTLVATNVAA 364
T I+F TK++ +++ L A LHG Q QRE++L GFR+ ++ LVAT+V
Sbjct: 578 TAIVFVNTKKNCDSIAKNLDKAGYRVTTLHGGKSQEQREISLEGFRAKRYNVLVATDVVG 637
Query: 365 RGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAV 404
RG+DI DV +I + P+ +E Y HR GRTGRAG +GVA
Sbjct: 638 RGIDIPDVAHVINYDMPKHIEMYTHRIGRTGRAGKSGVAT 677
>AT5G08620.1 | Symbols: STRS2, ATRH25 | DEA(D/H)-box RNA helicase
family protein | chr5:2794540-2797548 FORWARD LENGTH=563
Length = 563
Score = 185 bits (470), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 125/358 (34%), Positives = 192/358 (53%), Gaps = 24/358 (6%)
Query: 68 LKEKGIVSLFPIQAMTFDTVLDGSDLVGRARTGQGKTLAFVLPILESLTNGPTKASRKTG 127
+++ G ++ +Q T +L G D++ +A+TG GKT+AF+LP +E++ P ASR
Sbjct: 95 IEDAGFKTMTVVQEATLPLILQGKDILAKAKTGTGKTVAFLLPSIEAVIKAPP-ASRD-- 151
Query: 128 YGRPPSVIVLL--PTRELACQVHADFEV---YGGAMGLTSCCLYGGAPYQGQEMKLKRG- 181
R P +IVL+ PTRELACQ A+ + Y ++G+ + GG ++ +L++
Sbjct: 152 -NRHPPIIVLVVCPTRELACQAAAEANILLKYHPSIGVQ--VVIGGTKLPTEQRRLQKSP 208
Query: 182 VDVVIGTPGRIKDHIERGN---IDLSQLKFRVLDEADEMLRMGFVEDVELILGKVKNVGQ 238
+++ TPGR+KDHI+ + L +K VLDEAD +L MGF ++E I+ V Q
Sbjct: 209 CQILVATPGRLKDHIDNTSGFATRLMGVKVLVLDEADHLLDMGFRREIERIIAAVPK--Q 266
Query: 239 VQTLLFSATLPDWVKQIAAKFLKRDKKTADLVGNTKMKASTSVRHIVLPCTSSARSQLIP 298
QT LFSAT+ D V+QI LKRD + + V + V + + + L+
Sbjct: 267 RQTFLFSATVSDEVRQICHVALKRDHEFVNCVQEGAGETHQKVSQMYMIASLDRHFSLLY 326
Query: 299 DIIRCY---SSGGRTIIFTET----KESASQLSQLLPGARALHGDIQQAQREVTLSGFRS 351
+++ + + G + IIF T + A L +L R +H Q+ R FR
Sbjct: 327 GLLKKHITDNVGYKVIIFCTTAMVTRLVADLLGKLSLNVREIHSRKPQSYRTRVSDEFRK 386
Query: 352 GKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLYDP 409
K + LV ++V+ARG+D DV L++Q P D E YIHR GRTGR G G V+L P
Sbjct: 387 SKSIILVTSDVSARGVDYPDVSLVVQMGLPSDREQYIHRLGRTGRKGKEGEGVLLLAP 444
>AT5G08610.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:2790341-2794059
FORWARD LENGTH=850
Length = 850
Score = 183 bits (464), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 127/358 (35%), Positives = 191/358 (53%), Gaps = 24/358 (6%)
Query: 68 LKEKGIVSLFPIQAMTFDTVLDGSDLVGRARTGQGKTLAFVLPILESLTNGPTKASRKTG 127
+K+ G ++ +Q T +L G D++ +A+TG GKT+AF+LP +E++ P ASR +
Sbjct: 397 IKDAGFETMTVVQEATLPIILQGKDVLAKAKTGTGKTVAFLLPAIEAVIKSPP-ASRDS- 454
Query: 128 YGRPPSVIVLL--PTRELACQVHADFEV---YGGAMGLTSCCLYGGAPYQGQEMKLKRG- 181
R P +IVL+ PTRELA Q A+ Y ++G+ + GG ++ +++
Sbjct: 455 --RQPPIIVLVVCPTRELASQAAAEANTLLKYHPSIGVQ--VVIGGTKLPTEQRRMQTNP 510
Query: 182 VDVVIGTPGRIKDHIERGN---IDLSQLKFRVLDEADEMLRMGFVEDVELILGKVKNVGQ 238
+++ TPGR+KDHIE + L +K VLDEAD +L MGF D+E I+ V Q
Sbjct: 511 CQILVATPGRLKDHIENTSGFATRLMGVKVLVLDEADHLLDMGFRRDIERIIAAVPK--Q 568
Query: 239 VQTLLFSATLPDWVKQIAAKFLKRDKKTADLVGNTKMKASTSVRHIVLPCTSSARSQLIP 298
QT LFSAT+P+ V+QI LKRD + + V + V + + + L+
Sbjct: 569 RQTFLFSATVPEEVRQICHVALKRDHEFINCVQEGSGETHQKVTQMYMIASLDRHFSLLH 628
Query: 299 DIIRCYSSGG---RTIIFTET----KESASQLSQLLPGARALHGDIQQAQREVTLSGFRS 351
+++ + + + IIF T + A LSQL R +H Q+ R FR
Sbjct: 629 VLLKEHIADNVDYKVIIFCTTAMVTRLVADLLSQLSLNVREIHSRKPQSYRTRVSDEFRK 688
Query: 352 GKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLYDP 409
K + LV ++V+ARG+D DV L++Q P D E YIHR GRTGR G G V+L P
Sbjct: 689 SKAIILVTSDVSARGVDYPDVSLVVQMGLPSDREQYIHRLGRTGRKGKEGEGVLLLAP 746
>AT4G33370.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr4:16069669-16071405 REVERSE LENGTH=542
Length = 542
Score = 182 bits (463), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 133/376 (35%), Positives = 191/376 (50%), Gaps = 33/376 (8%)
Query: 47 VKKED-PNAVSKF---RISGPLREMLKEKGIVSLFPIQAMTFDTVLDGSDLVGRARTGQG 102
V ED P + F + PL MLK+KGI+ PIQ VL G D++G A TG G
Sbjct: 87 VNGEDIPPPIKNFMDMKFPSPLLRMLKDKGIMHPTPIQVQGLPVVLSGRDMIGIAFTGSG 146
Query: 103 KTLAFVLPI----LESLTNGPTKASRKTGYGRPPSVIVLLPTRELACQVHADFE------ 152
KTL FVLP+ L+ P A G P +V+ P+RELA Q + E
Sbjct: 147 KTLVFVLPMIILALQEEIMMPIAA------GEGPIALVICPSRELAKQTYDVVEQFVASL 200
Query: 153 VYGGAMGLTSCCLYGGAPYQGQEMKLKRGVDVVIGTPGRIKDHIERGNIDLSQLKFRVLD 212
V G L S GG + Q +K+GV +V+ TPGR+KD + + + L + LD
Sbjct: 201 VEDGYPRLRSLLCIGGVDMRSQLDVVKKGVHIVVATPGRLKDILAKKKMSLDACRLLTLD 260
Query: 213 EADEMLRMGFVEDVELILGKVKNVGQVQTLLFSATLPDWVKQIAAKFLKRDKKTADLVGN 272
EAD ++ +GF +D+ + K+ Q QTLLFSAT+P ++ A L K VG
Sbjct: 261 EADRLVDLGFEDDIRHVFDHFKS--QRQTLLFSATMPAKIQIFATSALV--KPVTVNVG- 315
Query: 273 TKMKASTSVRHIVLPCTSSARSQLIPDIIRCYS-SGGRTIIFTETKESASQLSQ--LLPG 329
+A + ++ + I ++ C + +IF E K + + LL G
Sbjct: 316 ---RAGAANLDVIQEVEYVKQEAKIVYLLECLQKTTPPVLIFCENKADVDDIHEYLLLKG 372
Query: 330 --ARALHGDIQQAQREVTLSGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAY 387
A A+HG Q R+ +S F++GK LVAT+VA++GLD D+Q +I + P ++E Y
Sbjct: 373 VEAVAIHGGKDQEDRDYAISLFKAGKKDVLVATDVASKGLDFPDIQHVINYDMPGEIENY 432
Query: 388 IHRSGRTGRAGNTGVA 403
+HR GRTGR G TG+A
Sbjct: 433 VHRIGRTGRCGKTGIA 448
>AT4G16630.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr4:9362176-9366449 REVERSE LENGTH=789
Length = 789
Score = 182 bits (462), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 131/356 (36%), Positives = 190/356 (53%), Gaps = 23/356 (6%)
Query: 60 ISGPLREMLKEKGIVSLFPIQAMTFDTVLDGSDLVGRARTGQGKTLAFVLPILESLTNGP 119
+S PL + G PIQA L G DL A TG GKT AF LP LE L P
Sbjct: 174 LSRPLLRACETLGYKKPTPIQAACIPLALTGRDLCASAITGSGKTAAFALPTLERLLFRP 233
Query: 120 TK--ASRKTGYGRPPSVIVLLPTRELACQVHADFEVYGGAMGLTSCCLYGGAPYQGQEMK 177
+ A+R V++L PTRELA Q+H+ + + + GG + QE+
Sbjct: 234 KRVFATR---------VLILTPTRELAVQIHSMIQNLAQFTDIKCGLIVGGLSVREQEVV 284
Query: 178 LKRGVDVVIGTPGRIKDHIERG-NIDLSQLKFRVLDEADEMLRMGFVEDV-ELILGKVKN 235
L+ D+V+ TPGR+ DH+ ++DL L +LDEAD +L+ GF ++ EL+ K
Sbjct: 285 LRSMPDIVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLQTGFATEITELVRLCPK- 343
Query: 236 VGQVQTLLFSATLPDWVKQIAAKFLKRDKK-TADLVGNTKMKASTSVRHIVLPCTSSARS 294
+ QT+LFSAT+ + VK++ L + + +AD + V I ++ +
Sbjct: 344 --RRQTMLFSATMTEEVKELVKLSLNKPLRLSADPSARRPPGLTEEVVRIRRTREANQEA 401
Query: 295 QLIPDIIRCYSSGGRTIIFTETKESASQLSQL--LPGARA--LHGDIQQAQREVTLSGFR 350
L+ R + S + IIF+ TK++A +L L L G +A LHG++ QAQR +L FR
Sbjct: 402 VLLSLCTRTFKS--KVIIFSGTKQAAHRLKILFGLAGLKAAELHGNLTQAQRLDSLELFR 459
Query: 351 SGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVML 406
+ L+AT+VAARGLDI VQ +I PR++++Y+HR GRT RAG G AV
Sbjct: 460 KQEVDFLIATDVAARGLDIIGVQTVINYACPREIDSYVHRVGRTARAGREGYAVTF 515
>AT5G63630.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:25472598-25476402
REVERSE LENGTH=788
Length = 788
Score = 180 bits (456), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 120/357 (33%), Positives = 189/357 (52%), Gaps = 22/357 (6%)
Query: 68 LKEKGIVSLFPIQAMTFDTVLDGSDLVGRARTGQGKTLAFVLPILESLTNGPTKASRKTG 127
+K+ G ++ +Q T +L G D++ +A+TG GKT+AF+LP +E + P +
Sbjct: 335 IKDAGYETMTVVQEATLPIILKGKDVLAKAKTGTGKTVAFLLPSIEVVVKSPPTSPDNK- 393
Query: 128 YGRPPSV-IVLLPTRELACQVHADFEV---YGGAMGLTSCCLYGGAPYQGQEMKLKRG-V 182
RPP + +V+ PTRELA Q + Y ++G+ + GG ++ +++
Sbjct: 394 --RPPILALVICPTRELANQAATEANTLLKYHPSIGVQ--VVIGGTRLGLEQKRMQTNPC 449
Query: 183 DVVIGTPGRIKDHIERG---NIDLSQLKFRVLDEADEMLRMGFVEDVELILGKVKNVGQV 239
+++ TPGR+KDHIE L +K VLDEAD +L MGF +D+E I+ V +
Sbjct: 450 QILVATPGRLKDHIENTPGFATRLKGVKVLVLDEADHLLDMGFRKDIERIISAVPK--ER 507
Query: 240 QTLLFSATLPDWVKQIAAKFLKRDKKTADLVGNTKMKASTSVRHIVLPCTSSARSQLIPD 299
QT LFSAT+P+ V+QI L+RD + + V ++ VR + + + L+
Sbjct: 508 QTFLFSATVPEEVRQICLVALRRDHEFVNCVHEGTIETHQQVRQMHMIASLDRHFSLLYT 567
Query: 300 IIRCYSSGG---RTIIFTET----KESASQLSQLLPGARALHGDIQQAQREVTLSGFRSG 352
++R + G + I+F T K A L +L R +H Q+ R + FR
Sbjct: 568 LLREHIMGNVDYKVIVFCTTAMVTKLVADLLGELNLNVREIHSRKPQSYRTRVSNEFRKS 627
Query: 353 KFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLYDP 409
K + LV ++V+ARG+D DV L++Q P+D E YIHR GRTGR G G ++L P
Sbjct: 628 KGLILVTSDVSARGVDYPDVTLVLQVGLPKDREQYIHRLGRTGRKGKEGEGILLLAP 684
>AT2G47330.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:19429083-19431617
REVERSE LENGTH=760
Length = 760
Score = 180 bits (456), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 120/338 (35%), Positives = 182/338 (53%), Gaps = 24/338 (7%)
Query: 79 IQAMTFDTVLDGSDLVGRARTGQGKTLAFVLPILESLTNGPTKASRKTGYGRPPSVIVLL 138
IQ VL G D++G A+TG GKT AFVLP++ + + P + R G P ++
Sbjct: 254 IQCQALPIVLSGRDVIGIAKTGSGKTAAFVLPMIVHIMDQP-ELQRDEG----PIGVICA 308
Query: 139 PTRELACQVHADFEVYGGAMGLTSCCLYGGAPYQGQEMKLKRGVDVVIGTPGRIKDHIER 198
PTRELA Q+ + + + A GL +YGG Q +LK G ++V+ TPGR+ D ++
Sbjct: 309 PTRELAHQIFLEAKKFSKAYGLRVSAVYGGMSKHEQFKELKAGCEIVVATPGRLIDMLKM 368
Query: 199 GNIDLSQLKFRVLDEADEMLRMGFVEDVELILGKVKNVGQVQTLLFSATLPDWVKQIAAK 258
+ + + + VLDEAD M +GF V I+G+++ QTLLFSAT+P V+++A +
Sbjct: 369 KALTMMRASYLVLDEADRMFDLGFEPQVRSIVGQIRP--DRQTLLFSATMPWKVEKLARE 426
Query: 259 FLKRDKKTADLVGNTKMKASTSVRHIVLPCTSSARS-----QLIPDIIRCYSSGGRTIIF 313
L + VG M A+ + +V S A + +P +I G ++F
Sbjct: 427 ILSDPIRVT--VGEVGM-ANEDITQVVNVIPSDAEKLPWLLEKLPGMI----DEGDVLVF 479
Query: 314 TETKESASQLSQLLP----GARALHGDIQQAQREVTLSGFRSGKFMTLVATNVAARGLDI 369
K + ++ L ALHGD QA R TL F+SG L+AT+VAARGLDI
Sbjct: 480 ASKKATVDEIEAQLTLNSFKVAALHGDKDQASRMETLQKFKSGVHHVLIATDVAARGLDI 539
Query: 370 NDVQLIIQCEPPRDVEAYIHRSGRTGRAGN-TGVAVML 406
++ ++ + +D++ ++HR GRTGRAG+ GVA L
Sbjct: 540 KSLKTVVNYDIAKDMDMHVHRIGRTGRAGDRDGVAYTL 577
>AT2G07750.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr2:3576483-3580396 FORWARD LENGTH=845
Length = 845
Score = 172 bits (437), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 116/354 (32%), Positives = 183/354 (51%), Gaps = 15/354 (4%)
Query: 68 LKEKGIVSLFPIQAMTFDTVLDGSDLVGRARTGQGKTLAFVLPILESLTNGPTKASRKTG 127
L GIV + +Q T LDG D + +A+TG GK++AF+LP +E++ + +
Sbjct: 390 LSASGIVKMTRVQDATLSECLDGKDALVKAKTGTGKSMAFLLPAIETVLKA-MNSGKGVH 448
Query: 128 YGRPPSVIVLLPTRELACQVHADFE-VYGGAMGLTSCCLYGGAPYQGQEMKLK-RGVDVV 185
P V++L PTRELA Q+ A+ + + G+ L GG ++ + +L+ ++
Sbjct: 449 KVAPIFVLILCPTRELASQIAAEGKALLKNHDGIGVQTLIGGTRFRLDQQRLESEPCQIL 508
Query: 186 IGTPGRIKDHIERGN---IDLSQLKFRVLDEADEMLRMGFVEDVELILGKVKNVGQVQTL 242
I TPGR+ DHIE + L LK ++DEAD +L +GF DVE I+ + Q Q+L
Sbjct: 509 IATPGRLLDHIENKSGLTSRLMALKLFIVDEADLLLDLGFKRDVEKIIDCLPR--QRQSL 566
Query: 243 LFSATLPDWVKQIAAKFLKRDKKTADLVGNTKMKASTSVRHIVLPCTSSARSQLIPDIIR 302
LFSAT+P V++++ LKRD D +G ++ V+ + + L+P +++
Sbjct: 567 LFSATIPKEVRRVSQLVLKRDHSYIDTIGLGCVETHDKVKQSCIVAPHESHFHLVPHLLK 626
Query: 303 CYSSG---GRTIIFTETKESASQLSQLLP----GARALHGDIQQAQREVTLSGFRSGKFM 355
+ + + I+F T S + LL R +H Q R F+ +
Sbjct: 627 EHINNMPDYKIIVFCSTGMVTSLMYTLLREMKLNVREIHARKPQLHRTCVSDEFKESNRL 686
Query: 356 TLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLYDP 409
LV ++V+ARG++ DV L+IQ P D E YIHR GRTGR G G ++L P
Sbjct: 687 ILVTSDVSARGMNYPDVTLVIQVGIPSDREQYIHRLGRTGREGKGGKGLLLIAP 740
>AT1G63250.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:23463284-23466451 REVERSE LENGTH=798
Length = 798
Score = 172 bits (437), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 125/407 (30%), Positives = 202/407 (49%), Gaps = 22/407 (5%)
Query: 68 LKEKGIVSLFPIQAMTFDTVLDGSDLVGRARTGQGKTLAFVLPILESLTNGPTKASRKTG 127
L GI+ + +Q T LDG D + +A+TG GK++AF+LP +E++ + +
Sbjct: 343 LSASGILKMTRVQDATLSECLDGKDALVKAKTGTGKSMAFLLPAIETVLKA-MNSGKGVN 401
Query: 128 YGRPPSVIVLLPTRELACQVHADFEV---YGGAMGLTSCCLYGGAPYQGQEMKLK-RGVD 183
P ++L PTRELA Q+ A+ + + +G+ + L GG ++ + +L+
Sbjct: 402 KVAPIFALILCPTRELASQIAAEGKALLKFHDGIGVQT--LIGGTRFKLDQQRLESEPCQ 459
Query: 184 VVIGTPGRIKDHIERGN---IDLSQLKFRVLDEADEMLRMGFVEDVELILGKVKNVGQVQ 240
++I TPGR+ DHIE + L LK ++DEAD +L +GF DVE I+ + Q Q
Sbjct: 460 ILIATPGRLLDHIENKSGLTSRLMALKLFIVDEADLLLDLGFRRDVEKIIDCLPR--QRQ 517
Query: 241 TLLFSATLPDWVKQIAAKFLKRDKKTADLVGNTKMKASTSVRHIVLPCTSSARSQLIPDI 300
+LLFSAT+P V++++ LKRD D +G ++ VR + + L+P +
Sbjct: 518 SLLFSATIPKEVRRVSQLVLKRDHSYIDTIGLGCVETHDKVRQSCIVAPHESHFHLVPHL 577
Query: 301 IRCYSSGG---RTIIFTETKESASQLSQLLP----GARALHGDIQQAQREVTLSGFRSGK 353
++ + + + I+F T S + LL R +H Q R F+
Sbjct: 578 LKEHINNTPDYKIIVFCSTGMVTSLMYTLLREMKLNVREIHARKPQLHRTRVSDEFKESN 637
Query: 354 FMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLYDPXXXX 413
+ LV ++V+ARG++ DV L+IQ P D E YIHR GRTGR G G ++L P
Sbjct: 638 RLILVTSDVSARGMNYPDVTLVIQVGIPSDREQYIHRLGRTGREGKGGEGLLLIAP--WE 695
Query: 414 XXXXXXXXGVKFEHVSAPQPDDIAK-AVGGEAAEMITQVSDSVIPAF 459
+ E + AP D I K V A++ T + ++ A+
Sbjct: 696 RYFLDELKDLPLEPIPAPDLDSIVKHQVDQSMAKIDTSIKEAAYHAW 742
>AT3G09620.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:2949152-2952205
REVERSE LENGTH=989
Length = 989
Score = 171 bits (434), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 109/350 (31%), Positives = 179/350 (51%), Gaps = 38/350 (10%)
Query: 60 ISGPLREMLKEKGIVSLFPIQAMTFDTVLDGSDLVGRARTGQGKTLAFVLPILESLTNGP 119
++ + + LK+ PIQA ++ G D +G A+TG GKTL FVLP+L + + P
Sbjct: 403 LTSKILDTLKKLNYEKPMPIQAQALPIIMSGRDCIGVAKTGSGKTLGFVLPMLRHIKDQP 462
Query: 120 TKASRKTGYGRPPSVIVLLPTRELACQVHADFEVYGGAMGLTSCCLYGGAPYQGQEMKLK 179
+ G P +V+ PTREL Q+++D + A+G+ +YGG+ Q +LK
Sbjct: 463 PVEA-----GDGPIGLVMAPTRELVQQIYSDIRKFSKALGIICVPVYGGSGVAQQISELK 517
Query: 180 RGVDVVIGTPGRIKDHI--ERGNI-DLSQLKFRVLDEADEMLRMGFVEDVELILGKVKNV 236
RG ++V+ TPGR+ D + G I +L ++ + V+DEAD M MGF + I+ ++
Sbjct: 518 RGTEIVVCTPGRMIDILCTSSGKITNLRRVTYLVMDEADRMFDMGFEPQITRIVQNIRP- 576
Query: 237 GQVQTLLFSATLPDWVKQIAAKFLKRDKKTADLVGNTKMKASTSVRHIVLPCTSSARSQL 296
QT+LFSAT P V+ +A K L K ++ + + + +V S R
Sbjct: 577 -DRQTVLFSATFPRQVETLARKVLN---KPVEIQVGGRSVVNKDITQLVEIRPESERFSR 632
Query: 297 IPDIIRCYSSGGRTIIFTETKESASQLSQLLPGARALHGDIQQAQREVTLSGFRSGKFMT 356
+ +++ + G+ ++F ++E ++S F+S
Sbjct: 633 LLELLGEWYEKGKVLVFVRSQEK-------------------------SISDFKSDVCNL 667
Query: 357 LVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVML 406
L+AT+VAARGLD+ +++L++ + P E Y+HR GRTGRAG G AV
Sbjct: 668 LIATSVAARGLDVKELELVVNFDAPNHYEDYVHRVGRTGRAGRKGCAVTF 717
>AT1G16280.1 | Symbols: RH36, AtRH36, SWA3 | RNA helicase 36 |
chr1:5568482-5570487 REVERSE LENGTH=491
Length = 491
Score = 162 bits (410), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 125/349 (35%), Positives = 171/349 (48%), Gaps = 26/349 (7%)
Query: 66 EMLKEKGIVSLFPIQAMTFDTVLDGSDLVGRARTGQGKTLAFVLPILESLTNGPTKASRK 125
E KE G+ P+Q +L G D++G A+TG GKT AF LPIL L P
Sbjct: 71 ETCKELGMRKPTPVQTHCVPKILAGRDVLGLAQTGSGKTAAFALPILHRLAEDP------ 124
Query: 126 TGYGRPPSVIVLLPTRELACQVHADFEVYGGAMGLTSCCLYGGAPYQGQEMKLKRGVDVV 185
YG +V+ PTRELA Q+ F+ G + L + GG Q M L +V
Sbjct: 125 --YG--VFALVVTPTRELAFQLAEQFKALGSCLNLRCSVIVGGMDMLTQTMSLVSRPHIV 180
Query: 186 IGTPGRIKDHIERGNIDL----SQLKFRVLDEADEMLRMGFVEDVELILGKVKNVGQVQT 241
I TPGRIK +E N D+ S+ KF VLDEAD +L +GF +++ I + QT
Sbjct: 181 ITTPGRIKVLLE-NNPDVPPVFSRTKFLVLDEADRVLDVGFQDELRTIFQCLPK--SRQT 237
Query: 242 LLFSATLPDWVKQIAAKFLKRDKKTADLVGNTKMKA-STSVRHIVLPCTSSARSQLIPDI 300
LLFSAT+ + A K +K T + + + L+ +
Sbjct: 238 LLFSATM---TSNLQALLEHSSNKAYFYEAYEGLKTVDTLTQQFIFEDKDAKELYLVHIL 294
Query: 301 IRCYSSGGRT-IIFTETKESASQLSQLLPGAR----ALHGDIQQAQREVTLSGFRSGKFM 355
+ G R+ +IF T + +LS +L A+H Q+ R LS F+SGK
Sbjct: 295 SQMEDKGIRSAMIFVSTCRTCQRLSLMLDELEVENIAMHSLNSQSMRLSALSKFKSGKVP 354
Query: 356 TLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAV 404
L+AT+VA+RGLDI V L+I + PRD Y+HR GRT RAG G+AV
Sbjct: 355 ILLATDVASRGLDIPTVDLVINYDIPRDPRDYVHRVGRTARAGRGGLAV 403
>AT5G05450.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:1612077-1615195
FORWARD LENGTH=593
Length = 593
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 116/374 (31%), Positives = 188/374 (50%), Gaps = 36/374 (9%)
Query: 60 ISGPLREMLKEKGIVSLFPIQAMTFDTVLDGSDLVGRARTGQGKTLAFVLPILESL---T 116
+SG + E L + P+QA T + D+ A TG GKTLAFV+P++E L T
Sbjct: 23 LSGDIIEALNQSDFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEILRRST 82
Query: 117 NGPTKASRKTGYGRPPSVIVLLPTRELACQVHADFEVYGGAMGLTSCCLYGGAPYQGQEM 176
+ P K + G +++ PTREL+ Q++ + + + + L G +M
Sbjct: 83 SFPPKPHQVMG-------VIISPTRELSTQIYNVAQPFVSTLANVNSVLLVGGREVKADM 135
Query: 177 KL--KRGVDVVIGTPGRIKDHIERGNI-DLSQLKFRVLDEADEMLRMGFVEDVELILGKV 233
K+ + G +V+IGTPGR+ D +ER I D L+ +LDEAD +L MGF V I+ ++
Sbjct: 136 KIIEEEGCNVLIGTPGRLSDIMERMEILDFRNLEILILDEADRLLEMGFQRQVNYIISRL 195
Query: 234 KNVGQVQTLLFSATLPDWVKQIAAKFL----------KRDKKTADLVGNTKMKASTSVRH 283
Q +T LFSAT + V+++A L K +++ + N+K + + +
Sbjct: 196 PK--QRRTGLFSATQTEGVEELAKAGLRNPVRVEVRAKSKSESSQQLTNSKTPSGLHLEY 253
Query: 284 IVLPCTSSARSQLIPDIIRCYSSGGRTIIFTETKESASQLSQLLPGARAL--------HG 335
+ C + +S + D++ +S + I+F T S +L AL HG
Sbjct: 254 --MECEADKKSSQLVDLL-IKNSDKKLIVFFMTCASVDYWGLVLSKIPALKSISLIPIHG 310
Query: 336 DIQQAQREVTLSGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTG 395
D++Q R+ L+ F L+ T+VAARGLDI + ++Q +PP+D + HR+GRT
Sbjct: 311 DMKQNARDKALASFTKASSGALLCTDVAARGLDIPGIDYVVQYDPPQDPNMFNHRAGRTA 370
Query: 396 RAGNTGVAVMLYDP 409
R G G A++ P
Sbjct: 371 RLGRQGRAIVFLLP 384
>AT1G77030.1 | Symbols: | hydrolases, acting on acid anhydrides, in
phosphorus-containing anhydrides;ATP-dependent
helicases;nucleic acid binding;ATP binding;RNA
binding;helicases | chr1:28947887-28951526 REVERSE
LENGTH=845
Length = 845
Score = 159 bits (403), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 119/351 (33%), Positives = 176/351 (50%), Gaps = 25/351 (7%)
Query: 68 LKEKGIVSLFPIQAMTFDTVLDGSDLVGRARTGQGKTLAFVLPILESLTNG-PTKASRKT 126
+K+KG PIQ T +L G D+V ARTG GKT AF++P+LE L P R
Sbjct: 43 IKKKGYKVPTPIQRKTMPLILSGVDVVAMARTGSGKTAAFLIPMLEKLKQHVPQGGVR-- 100
Query: 127 GYGRPPSVIVLLPTRELACQVHADFEVYGGAMGLTSCCLYGGAPYQGQEMKLKRGVDVVI 186
++L PTR+LA Q + G L L GG + Q +L +G DV+I
Sbjct: 101 -------ALILSPTRDLAEQTLKFTKELGKFTDLRVSLLVGGDSMEDQFEELTKGPDVII 153
Query: 187 GTPGRIKDHI-ERGNIDLSQLKFRVLDEADEMLRMGFVEDVELILGKVKNVGQVQTLLFS 245
TPGR+ + E ++ L +++ V DEAD + MGF E + IL ++ QTLLFS
Sbjct: 154 ATPGRLMHLLSEVDDMTLRTVEYVVFDEADSLFGMGFAEQLHQILTQLSE--NRQTLLFS 211
Query: 246 ATLPDWVKQIAAKFLKRDKKTADLVGNTKMKASTSVRHIVLPCTSSARSQLIPDIIRCY- 304
ATLP + + A L+ + V N K S ++ L + + ++R +
Sbjct: 212 ATLPSALAEFAKAGLREPQLVRLDVEN---KISPDLKLSFLTVRPEEKYSALLYLVREHI 268
Query: 305 SSGGRTIIFTETKE------SASQLSQLLPGARALHGDIQQAQREVTLSGFRSGKFMTLV 358
SS +T+IF TK S +L + P +GD+ Q R++ +S FR+ K M L+
Sbjct: 269 SSDQQTLIFVSTKHHVEFVNSLFKLENIEPSV--CYGDMDQDARKIHVSRFRARKTMLLI 326
Query: 359 ATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLYDP 409
T++AARG+DI + +I + P + ++HR GR RAG TG A P
Sbjct: 327 VTDIAARGIDIPLLDNVINWDFPPRPKIFVHRVGRAARAGRTGCAYSFVTP 377
>AT1G28180.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:9843084-9845002
REVERSE LENGTH=614
Length = 614
Score = 157 bits (396), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 107/339 (31%), Positives = 165/339 (48%), Gaps = 28/339 (8%)
Query: 88 LDGSDLVGRARTGQGKTLAFVLPILESLTNGPTKASRKTGYGRPPSVIVLLPTRELACQV 147
L+ D++G + TG GKT AFVLP+L ++ P R+ P +V++PTRELA Q+
Sbjct: 237 LEQRDVIGISATGSGKTAAFVLPMLAYISRLP--PMREENQTEGPYALVMVPTRELAHQI 294
Query: 148 HADFEVYGGAMGLTSCCLYGGAPYQGQEMKLKRGVDVVIGTPGRIKDHIERGNIDLSQLK 207
+ + +G + + G + Q +KL +G ++VI TPGR+ D +ER + L+Q
Sbjct: 295 EEETVKFSRYLGFKAVSITGWESIEKQALKLSQGCEIVIATPGRLLDCLERRYVVLNQCN 354
Query: 208 FRVLDEADEMLRMGFVEDVELILG--KVKNVGQVQ-------------TLLFSATLPDWV 252
+ VLDEAD M+ M F V +L N+ + T +FSAT+ V
Sbjct: 355 YLVLDEADRMIDMDFEPQVSEVLDVMPCSNLKPEKEDEELEEKKIYRTTYMFSATMLLSV 414
Query: 253 KQIAAKFLKRDKKTADLVGNTKMKASTSVRHIVLPCTSSARSQLIPDIIRCYSSGGRTII 312
+++A KFL+ +G T + + V+ S + + +I I+
Sbjct: 415 ERLARKFLR--NPVVVTIGET----TKFITQQVIMTKESDKFSRLKKLIDDLGDDKTAIV 468
Query: 313 FTETKESASQLSQLLPG-----ARALHGDIQQAQREVTLSGFRSGKFMTLVATNVAARGL 367
F T+ + + L LH Q QR+ +L F+ +F LV T+V RGL
Sbjct: 469 FVNTRNKVDYIVKNLEKVGRCRVTTLHAGKSQEQRDYSLEEFKKKRFNVLVTTDVLGRGL 528
Query: 368 DINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVML 406
DI D+ +I + P ++ Y HR GRTGRAG TGVA
Sbjct: 529 DILDLAQVINYDMPNTMDLYTHRIGRTGRAGKTGVATTF 567
>AT5G60990.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr5:24546601-24549148 REVERSE LENGTH=456
Length = 456
Score = 156 bits (394), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 112/337 (33%), Positives = 175/337 (51%), Gaps = 13/337 (3%)
Query: 79 IQAMTFDTVLDGSDLVGRARTGQGKTLAFVLPILESLTNGPTKASRKTGYGRPPSVI--V 136
IQA L+G D++G A+TG GKT AF +PIL++L + K G P+ V
Sbjct: 35 IQAEALPFALEGKDVIGLAQTGSGKTGAFAIPILQALLEYVYDSEPKKGRRPDPAFFACV 94
Query: 137 LLPTRELACQVHADFEVYGGAMGLTSCCLYGGAPYQGQEMKLKRGVDVVIGTPGRIKDHI 196
L PTRELA Q+ FE G + L L GG Q + L + V++ TPGR+ DH+
Sbjct: 95 LSPTRELAIQIAEQFEALGADISLRCAVLVGGIDRMQQTIALGKRPHVIVATPGRLWDHM 154
Query: 197 -ERGNIDLSQLKFRVLDEADEMLRMGFVEDVELILGKVKNVGQVQTLLFSATLPDWVKQI 255
+ L LK+ VLDEAD +L F + + IL ++ + +T LFSAT+ V+++
Sbjct: 155 SDTKGFSLKSLKYLVLDEADRLLNEDFEKSLNQILEEIPL--ERKTFLFSATMTKKVRKL 212
Query: 256 AAKFLKRDKKTADLVGNTKMKASTSVRHIVLPCTSSARSQLIPDIIRCYSSGGRTIIFTE 315
L+ K + +K +++ + + + I+ ++IFT
Sbjct: 213 QRACLRNPVK---IEAASKYSTVDTLKQQYRFVAAKYKDCYLVYILSEMPEST-SMIFTR 268
Query: 316 TKESASQLSQLLP--GARAL--HGDIQQAQREVTLSGFRSGKFMTLVATNVAARGLDIND 371
T + L+ +L G RA+ G + Q++R L+ F++G+ LV T+VA+RGLDI
Sbjct: 269 TCDGTRFLALVLRSLGFRAIPISGQMTQSKRLGALNKFKAGECNILVCTDVASRGLDIPS 328
Query: 372 VQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLYD 408
V ++I + P + + YIHR GRT RAG +GV + L +
Sbjct: 329 VDVVINYDIPTNSKDYIHRVGRTARAGRSGVGISLVN 365
>AT3G02065.3 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:359136-360734
FORWARD LENGTH=505
Length = 505
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 102/337 (30%), Positives = 170/337 (50%), Gaps = 14/337 (4%)
Query: 78 PIQAMTFDTVLDGSDLVGRARTGQGKTLAFVLPILESLTNGPTKASRKTGYGRPPSVIVL 137
PIQ L G L+ A TG GKT +F++PI+ T + + R P +VL
Sbjct: 135 PIQMQAIPAALTGKSLLASADTGSGKTASFLVPIISRCTT--YHSEHPSDQRRNPLAMVL 192
Query: 138 LPTRELACQVHADFEVYGGAMGLTSCCLYGGAPYQGQEMKLKRGVDVVIGTPGRIKDHIE 197
PTREL QV ++ G + + + GG P GQ ++++GV+++IGTPGR+ D +
Sbjct: 193 APTRELCVQVEDQAKMLGKGLPFKTALVVGGDPMSGQLYRIQQGVELIIGTPGRVVDLLS 252
Query: 198 RGNIDLSQLKFRVLDEADEMLRMGFVEDVELILGKVKNVGQVQTLLFSATLPDWVKQIAA 257
+ I+L + VLDE D ML+ GF + V I + + Q Q LLFSAT+ V+++
Sbjct: 253 KHTIELDNIMTFVLDEVDCMLQRGFRDQVMQIF---QALSQPQVLLFSATISREVEKVGG 309
Query: 258 KFLKRDKKTADLVGNTKMKASTSVRHIVLPCTSSARSQLIPDIIRCYSS-GGRTIIFTET 316
K + +GN K + +V + + + + Q + DI+R + +++ +
Sbjct: 310 SLAKEIILVS--IGNPN-KPNKAVNQLAIWVDAKQKKQKLFDILRSQNHFKPPAVVYVSS 366
Query: 317 KESASQLSQ---LLPGARAL--HGDIQQAQREVTLSGFRSGKFMTLVATNVAARGLDIND 371
+ A L+ ++ G +AL HG+ +R + F G+ LV+T V RG+D+
Sbjct: 367 RVGADLLANAITVVTGVKALSIHGEKPMKERRDVMGSFLGGEVPVLVSTGVLGRGVDLLV 426
Query: 372 VQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLYD 408
V+ +I + P ++ YIH GR R G G A++ +
Sbjct: 427 VRQVIVFDMPSTIKEYIHVIGRASRMGEKGTAIVFVN 463
>AT3G02065.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:359136-360734
FORWARD LENGTH=505
Length = 505
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 102/337 (30%), Positives = 170/337 (50%), Gaps = 14/337 (4%)
Query: 78 PIQAMTFDTVLDGSDLVGRARTGQGKTLAFVLPILESLTNGPTKASRKTGYGRPPSVIVL 137
PIQ L G L+ A TG GKT +F++PI+ T + + R P +VL
Sbjct: 135 PIQMQAIPAALTGKSLLASADTGSGKTASFLVPIISRCTT--YHSEHPSDQRRNPLAMVL 192
Query: 138 LPTRELACQVHADFEVYGGAMGLTSCCLYGGAPYQGQEMKLKRGVDVVIGTPGRIKDHIE 197
PTREL QV ++ G + + + GG P GQ ++++GV+++IGTPGR+ D +
Sbjct: 193 APTRELCVQVEDQAKMLGKGLPFKTALVVGGDPMSGQLYRIQQGVELIIGTPGRVVDLLS 252
Query: 198 RGNIDLSQLKFRVLDEADEMLRMGFVEDVELILGKVKNVGQVQTLLFSATLPDWVKQIAA 257
+ I+L + VLDE D ML+ GF + V I + + Q Q LLFSAT+ V+++
Sbjct: 253 KHTIELDNIMTFVLDEVDCMLQRGFRDQVMQIF---QALSQPQVLLFSATISREVEKVGG 309
Query: 258 KFLKRDKKTADLVGNTKMKASTSVRHIVLPCTSSARSQLIPDIIRCYSS-GGRTIIFTET 316
K + +GN K + +V + + + + Q + DI+R + +++ +
Sbjct: 310 SLAKEIILVS--IGNPN-KPNKAVNQLAIWVDAKQKKQKLFDILRSQNHFKPPAVVYVSS 366
Query: 317 KESASQLSQ---LLPGARAL--HGDIQQAQREVTLSGFRSGKFMTLVATNVAARGLDIND 371
+ A L+ ++ G +AL HG+ +R + F G+ LV+T V RG+D+
Sbjct: 367 RVGADLLANAITVVTGVKALSIHGEKPMKERRDVMGSFLGGEVPVLVSTGVLGRGVDLLV 426
Query: 372 VQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLYD 408
V+ +I + P ++ YIH GR R G G A++ +
Sbjct: 427 VRQVIVFDMPSTIKEYIHVIGRASRMGEKGTAIVFVN 463
>AT4G00660.1 | Symbols: RH8, ATRH8 | RNAhelicase-like 8 |
chr4:274638-277438 FORWARD LENGTH=505
Length = 505
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 108/354 (30%), Positives = 172/354 (48%), Gaps = 34/354 (9%)
Query: 65 REML---KEKGIVSLFPIQAMTFDTVLDGSDLVGRARTGQGKTLAFVLPILESLT--NGP 119
RE+L EKG PIQ + L G D++ RA+ G GKT AF +P+LE + N
Sbjct: 140 RELLMGIYEKGFERPSPIQEESIPIALTGRDILARAKNGTGKTAAFCIPVLEKIDQDNNV 199
Query: 120 TKASRKTGYGRPPSVIVLLPTRELACQVHADFEVYGGAMGLTSCCLYGGAPYQGQEMKLK 179
+A ++++PTRELA Q + G + + GG + M+L
Sbjct: 200 IQA------------VIIVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLY 247
Query: 180 RGVDVVIGTPGRIKDHIERGNIDLSQLKFRVLDEADEMLRMGFVEDVELILGKVKNVGQV 239
+ V +++GTPGRI D ++G L V+DEAD++L F VE ++ + Q+
Sbjct: 248 QPVHLLVGTPGRILDLTKKGVCVLKDCSVLVMDEADKLLSQEFQPSVEHLISFLPESRQI 307
Query: 240 QTLLFSATLPDWVKQIAAKFLKRDKKTADLVGNTKMKASTSVRHIV-----LPCTSS--A 292
L+FSAT P VK +FL + +L+ +K T V + C ++ +
Sbjct: 308 --LMFSATFPVTVKDFKDRFLT-NPYVINLMDELTLKGITQFYAFVEERQKIHCLNTLFS 364
Query: 293 RSQLIPDIIRCYSSGGRTIIFTETKESASQLSQLLPGARALHGDIQQAQREVTLSGFRSG 352
+ Q+ II C S ++ A ++++L +H + Q R FR+G
Sbjct: 365 KLQINQSIIFCNSVNRVELL-------AKKITELGYSCFYIHAKMLQDHRNRVFHDFRNG 417
Query: 353 KFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVML 406
LV T++ RG+DI V ++I + P++ E Y+HR GR+GR G+ G+AV L
Sbjct: 418 ACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRFGHLGLAVNL 471
>AT4G00660.2 | Symbols: RH8, ATRH8 | RNAhelicase-like 8 |
chr4:274638-277438 FORWARD LENGTH=505
Length = 505
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 108/354 (30%), Positives = 172/354 (48%), Gaps = 34/354 (9%)
Query: 65 REML---KEKGIVSLFPIQAMTFDTVLDGSDLVGRARTGQGKTLAFVLPILESLT--NGP 119
RE+L EKG PIQ + L G D++ RA+ G GKT AF +P+LE + N
Sbjct: 140 RELLMGIYEKGFERPSPIQEESIPIALTGRDILARAKNGTGKTAAFCIPVLEKIDQDNNV 199
Query: 120 TKASRKTGYGRPPSVIVLLPTRELACQVHADFEVYGGAMGLTSCCLYGGAPYQGQEMKLK 179
+A ++++PTRELA Q + G + + GG + M+L
Sbjct: 200 IQA------------VIIVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLY 247
Query: 180 RGVDVVIGTPGRIKDHIERGNIDLSQLKFRVLDEADEMLRMGFVEDVELILGKVKNVGQV 239
+ V +++GTPGRI D ++G L V+DEAD++L F VE ++ + Q+
Sbjct: 248 QPVHLLVGTPGRILDLTKKGVCVLKDCSVLVMDEADKLLSQEFQPSVEHLISFLPESRQI 307
Query: 240 QTLLFSATLPDWVKQIAAKFLKRDKKTADLVGNTKMKASTSVRHIV-----LPCTSS--A 292
L+FSAT P VK +FL + +L+ +K T V + C ++ +
Sbjct: 308 --LMFSATFPVTVKDFKDRFLT-NPYVINLMDELTLKGITQFYAFVEERQKIHCLNTLFS 364
Query: 293 RSQLIPDIIRCYSSGGRTIIFTETKESASQLSQLLPGARALHGDIQQAQREVTLSGFRSG 352
+ Q+ II C S ++ A ++++L +H + Q R FR+G
Sbjct: 365 KLQINQSIIFCNSVNRVELL-------AKKITELGYSCFYIHAKMLQDHRNRVFHDFRNG 417
Query: 353 KFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVML 406
LV T++ RG+DI V ++I + P++ E Y+HR GR+GR G+ G+AV L
Sbjct: 418 ACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRFGHLGLAVNL 471
>AT2G45810.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr2:18859836-18862318 FORWARD LENGTH=528
Length = 528
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 112/356 (31%), Positives = 177/356 (49%), Gaps = 38/356 (10%)
Query: 65 REMLK---EKGIVSLFPIQAMTFDTVLDGSDLVGRARTGQGKTLAFVLPILESL--TNGP 119
R++L+ EKG PIQ + L GSD++ RA+ G GKT AF +P LE + N
Sbjct: 163 RDLLRGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTGAFCIPTLEKIDPENNV 222
Query: 120 TKASRKTGYGRPPSVIVLLPTRELACQVHADFEVYGGAMGLTSCCLYGGAPYQGQEMKLK 179
+A ++L+PTRELA Q + + + GG + M+L
Sbjct: 223 IQA------------VILVPTRELALQTSQVCKELSKYLKIEVMVTTGGTSLRDDIMRLY 270
Query: 180 RGVDVVIGTPGRIKDHIERGNIDLSQLKFRVLDEADEMLRMGFVEDVELILGKVKNVGQV 239
+ V +++GTPGRI D ++G L V+DEAD++L + F +E ++ + Q+
Sbjct: 271 QPVHLLVGTPGRILDLAKKGVCVLKDCAMLVMDEADKLLSVEFQPSIEELIQFLPESRQI 330
Query: 240 QTLLFSATLPDWVKQIAAKFLKR-------DKKTADLVGNTKMKASTSVRHIVLPCTSS- 291
L+FSAT P VK ++LK+ D+ T L+G T+ A R V C ++
Sbjct: 331 --LMFSATFPVTVKSFKDRYLKKPYIINLMDQLT--LMGVTQYYAFVEERQKVH-CLNTL 385
Query: 292 -ARSQLIPDIIRCYSSGGRTIIFTETKESASQLSQLLPGARALHGDIQQAQREVTLSGFR 350
++ Q+ II C S ++ A ++++L +H + Q R FR
Sbjct: 386 FSKLQINQSIIFCNSVNRVELL-------AKKITELGYSCFYIHAKMVQDHRNRVFHDFR 438
Query: 351 SGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVML 406
+G LV T++ RG+DI V ++I + PR E+Y+HR GR+GR G+ G+AV L
Sbjct: 439 NGACRNLVCTDLFTRGIDIQAVNVVINFDFPRTSESYLHRVGRSGRFGHLGLAVNL 494
>AT1G71370.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:26897235-26899381 REVERSE LENGTH=558
Length = 558
Score = 149 bits (376), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 114/365 (31%), Positives = 180/365 (49%), Gaps = 27/365 (7%)
Query: 60 ISGPLREMLKEKGIVSLFPIQAMTFDTVLDGSDLVGRARTGQGKTLAFVLPILESL---T 116
+S + E L G P+QA T + D+V A TG GKTLAF+LP +E +
Sbjct: 23 LSEDIIEALDRSGFEVCTPVQAETIPFLCSHKDVVVDAATGSGKTLAFLLPFIEIIRRSN 82
Query: 117 NGPTKASRKTGYGRPPSVIVLLPTRELACQVHADFEVYGGAM-GLTSCCLYGGAPYQGQE 175
+ P K + G +++ PTREL+ Q+H E + + + S L GG +
Sbjct: 83 SYPPKPHQVMG-------VIISPTRELSAQIHKVAEPFVSTLPNVNSVLLVGGREVEADM 135
Query: 176 MKLKR-GVDVVIGTPGRIKDHIERGN-IDLSQLKFRVLDEADEMLRMGFVEDVELILGKV 233
L+ G +++IGTPGR+ D ++R +D L+ +LDEAD +L MGF + V I+ ++
Sbjct: 136 NTLEEEGANLLIGTPGRLSDMMKRMEFLDFRNLEILILDEADRLLDMGFQKQVNYIISRL 195
Query: 234 KNVGQVQTLLFSATLPDWVKQIAAKFLKRDKKTADLVGNTKMKASTSVRHIVLPCTSSAR 293
Q +T LFSAT V +A L R+ +K K S+ + L C + +
Sbjct: 196 PK--QRRTGLFSATQTQAVADLAKAGL-RNAMEVISGAESKSKTSSGLYCEYLKCEADQK 252
Query: 294 S-QLIPDIIRCYSSGGRTIIFTETKESASQLSQLL---PGARAL-----HGDIQQAQREV 344
S QL+ +I + + ++F T +L P +++ HG + Q R+
Sbjct: 253 SSQLVHLLIE--NKNKKLVVFFMTCACVDYWGLVLSKIPTLKSISFFSTHGKMDQKGRDT 310
Query: 345 TLSGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAV 404
L+ F L+ T+VAARGLDI + ++Q +PP+D + +IHR GRT R G A+
Sbjct: 311 ALASFTEASSGVLLCTDVAARGLDIPGIDYVVQYDPPQDPDVFIHRVGRTARMERQGRAI 370
Query: 405 MLYDP 409
+ P
Sbjct: 371 VFLMP 375
>AT3G02065.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:359628-360734
FORWARD LENGTH=368
Length = 368
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 99/327 (30%), Positives = 167/327 (51%), Gaps = 14/327 (4%)
Query: 88 LDGSDLVGRARTGQGKTLAFVLPILESLTNGPTKASRKTGYGRPPSVIVLLPTRELACQV 147
L G L+ A TG GKT +F++PI+ T + + R P +VL PTREL QV
Sbjct: 8 LTGKSLLASADTGSGKTASFLVPIISRCTT--YHSEHPSDQRRNPLAMVLAPTRELCVQV 65
Query: 148 HADFEVYGGAMGLTSCCLYGGAPYQGQEMKLKRGVDVVIGTPGRIKDHIERGNIDLSQLK 207
++ G + + + GG P GQ ++++GV+++IGTPGR+ D + + I+L +
Sbjct: 66 EDQAKMLGKGLPFKTALVVGGDPMSGQLYRIQQGVELIIGTPGRVVDLLSKHTIELDNIM 125
Query: 208 FRVLDEADEMLRMGFVEDVELILGKVKNVGQVQTLLFSATLPDWVKQIAAKFLKRDKKTA 267
VLDE D ML+ GF + V I + + Q Q LLFSAT+ V+++ K +
Sbjct: 126 TFVLDEVDCMLQRGFRDQVMQIF---QALSQPQVLLFSATISREVEKVGGSLAKEIILVS 182
Query: 268 DLVGNTKMKASTSVRHIVLPCTSSARSQLIPDIIRCYSS-GGRTIIFTETKESASQLSQ- 325
+GN K + +V + + + + Q + DI+R + +++ ++ A L+
Sbjct: 183 --IGNPN-KPNKAVNQLAIWVDAKQKKQKLFDILRSQNHFKPPAVVYVSSRVGADLLANA 239
Query: 326 --LLPGARAL--HGDIQQAQREVTLSGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPP 381
++ G +AL HG+ +R + F G+ LV+T V RG+D+ V+ +I + P
Sbjct: 240 ITVVTGVKALSIHGEKPMKERRDVMGSFLGGEVPVLVSTGVLGRGVDLLVVRQVIVFDMP 299
Query: 382 RDVEAYIHRSGRTGRAGNTGVAVMLYD 408
++ YIH GR R G G A++ +
Sbjct: 300 STIKEYIHVIGRASRMGEKGTAIVFVN 326
>AT3G19760.1 | Symbols: EIF4A-III | eukaryotic initiation factor
4A-III | chr3:6863790-6866242 FORWARD LENGTH=408
Length = 408
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 100/330 (30%), Positives = 159/330 (48%), Gaps = 19/330 (5%)
Query: 79 IQAMTFDTVLDGSDLVGRARTGQGKTLAFVLPILESLTNGPTKASRKTGYGRPPSVIVLL 138
IQ +L G D++ +A++G GKT L + + + R ++L
Sbjct: 61 IQQRAVMPILQGRDVIAQAQSGTGKTSMIALSVCQVVDTS----------SREVQALILS 110
Query: 139 PTRELACQVHADFEVYGGAMGLTSCCLYGGAPYQGQEMKLKRGVDVVIGTPGRIKDHIER 198
PTRELA Q + G + + GG KL+ GV VV GTPGR+ D I+R
Sbjct: 111 PTRELATQTEKTIQAIGLHANIQAHACIGGNSVGEDIRKLEHGVHVVSGTPGRVCDMIKR 170
Query: 199 GNIDLSQLKFRVLDEADEMLRMGFVEDVELILGKVKNVGQVQTLLFSATLPDWVKQIAAK 258
++ +K +LDE+DEML GF + + + + +Q L SATLP + ++ +K
Sbjct: 171 RSLRTRAIKLLILDESDEMLSRGFKDQIYDVYRYLP--PDLQVCLVSATLPHEILEMTSK 228
Query: 259 FLKRDKKTADLVGNTKMKASTSVRHIVLPCTSSARSQLIPDIIRCYSSGGRTIIFTETKE 318
F+ K LV ++ + V + + D+ + + +IF TK
Sbjct: 229 FMTEPVKI--LVKRDELTLEGIKQFFVAVEKEEWKFDTLCDLYDTLTIT-QAVIFCNTKR 285
Query: 319 SASQLSQLLPG----ARALHGDIQQAQREVTLSGFRSGKFMTLVATNVAARGLDINDVQL 374
LS+ + ++HGD+ Q +R+ ++ FRSG L+ T+V ARG+D+ V L
Sbjct: 286 KVDYLSEKMRSHNFTVSSMHGDMPQKERDAIMNEFRSGDSRVLITTDVWARGIDVQQVSL 345
Query: 375 IIQCEPPRDVEAYIHRSGRTGRAGNTGVAV 404
+I + P + E YIHR GR+GR G GVA+
Sbjct: 346 VINYDLPNNRELYIHRIGRSGRFGRKGVAI 375
>AT3G61240.2 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:22666590-22669154 FORWARD LENGTH=498
Length = 498
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 112/356 (31%), Positives = 175/356 (49%), Gaps = 38/356 (10%)
Query: 65 REMLK---EKGIVSLFPIQAMTFDTVLDGSDLVGRARTGQGKTLAFVLPILESL--TNGP 119
R++LK EKG PIQ + L GSD++ RA+ G GKT AF +P+LE + N
Sbjct: 133 RDLLKGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTGAFCIPVLEKIDPNNNV 192
Query: 120 TKASRKTGYGRPPSVIVLLPTRELACQVHADFEVYGGAMGLTSCCLYGGAPYQGQEMKLK 179
+A ++L+PTRELA Q + + + GG + M+L
Sbjct: 193 IQA------------MILVPTRELALQTSQVCKELSKYLNIQVMVTTGGTSLRDDIMRLH 240
Query: 180 RGVDVVIGTPGRIKDHIERGNIDLSQLKFRVLDEADEMLRMGFVEDVELILGKVKNVGQV 239
+ V +++GTPGRI D ++G L V+DEAD++L F +E ++ +
Sbjct: 241 QPVHLLVGTPGRILDLTKKGVCVLKDCAMLVMDEADKLLSAEFQPSLEELIQFLPQ--NR 298
Query: 240 QTLLFSATLPDWVKQIAAKFLKR-------DKKTADLVGNTKMKASTSVRHIVLPCTSS- 291
Q L+FSAT P VK + L++ D+ T L+G T+ A R V C ++
Sbjct: 299 QFLMFSATFPVTVKAFKDRHLRKPYVINLMDQLT--LMGVTQYYAFVEERQKV-HCLNTL 355
Query: 292 -ARSQLIPDIIRCYSSGGRTIIFTETKESASQLSQLLPGARALHGDIQQAQREVTLSGFR 350
++ Q+ II C S ++ A ++++L +H + Q R FR
Sbjct: 356 FSKLQINQSIIFCNSVNRVELL-------AKKITELGYSCFYIHAKMVQDHRNRVFHEFR 408
Query: 351 SGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVML 406
+G LV T++ RG+DI V ++I + PR E+Y+HR GR+GR G+ G+AV L
Sbjct: 409 NGACRNLVCTDLFTRGIDIQAVNVVINFDFPRTSESYLHRVGRSGRFGHLGLAVNL 464
>AT3G61240.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:22666590-22669154 FORWARD LENGTH=498
Length = 498
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 112/356 (31%), Positives = 175/356 (49%), Gaps = 38/356 (10%)
Query: 65 REMLK---EKGIVSLFPIQAMTFDTVLDGSDLVGRARTGQGKTLAFVLPILESL--TNGP 119
R++LK EKG PIQ + L GSD++ RA+ G GKT AF +P+LE + N
Sbjct: 133 RDLLKGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTGAFCIPVLEKIDPNNNV 192
Query: 120 TKASRKTGYGRPPSVIVLLPTRELACQVHADFEVYGGAMGLTSCCLYGGAPYQGQEMKLK 179
+A ++L+PTRELA Q + + + GG + M+L
Sbjct: 193 IQA------------MILVPTRELALQTSQVCKELSKYLNIQVMVTTGGTSLRDDIMRLH 240
Query: 180 RGVDVVIGTPGRIKDHIERGNIDLSQLKFRVLDEADEMLRMGFVEDVELILGKVKNVGQV 239
+ V +++GTPGRI D ++G L V+DEAD++L F +E ++ +
Sbjct: 241 QPVHLLVGTPGRILDLTKKGVCVLKDCAMLVMDEADKLLSAEFQPSLEELIQFLPQ--NR 298
Query: 240 QTLLFSATLPDWVKQIAAKFLKR-------DKKTADLVGNTKMKASTSVRHIVLPCTSS- 291
Q L+FSAT P VK + L++ D+ T L+G T+ A R V C ++
Sbjct: 299 QFLMFSATFPVTVKAFKDRHLRKPYVINLMDQLT--LMGVTQYYAFVEERQKV-HCLNTL 355
Query: 292 -ARSQLIPDIIRCYSSGGRTIIFTETKESASQLSQLLPGARALHGDIQQAQREVTLSGFR 350
++ Q+ II C S ++ A ++++L +H + Q R FR
Sbjct: 356 FSKLQINQSIIFCNSVNRVELL-------AKKITELGYSCFYIHAKMVQDHRNRVFHEFR 408
Query: 351 SGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVML 406
+G LV T++ RG+DI V ++I + PR E+Y+HR GR+GR G+ G+AV L
Sbjct: 409 NGACRNLVCTDLFTRGIDIQAVNVVINFDFPRTSESYLHRVGRSGRFGHLGLAVNL 464
>AT1G72730.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:27378040-27379593 REVERSE LENGTH=414
Length = 414
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 99/319 (31%), Positives = 159/319 (49%), Gaps = 19/319 (5%)
Query: 90 GSDLVGRARTGQGKTLAFVLPILESLTNGPTKASRKTGYGRPPSVIVLLPTRELACQVHA 149
G D++ +A++G GKT F +L+ L + +VL PTRELA Q+
Sbjct: 78 GLDVIQQAQSGTGKTATFCSGVLQQLDISLVQCQ----------ALVLAPTRELAQQIEK 127
Query: 150 DFEVYGGAMGLTSCCLYGGAPYQGQEMKLKRGVDVVIGTPGRIKDHIERGNIDLSQLKFR 209
G +G+ + GG + + L+ GV VV+GTPGR+ D + R ++ +K
Sbjct: 128 VMRALGDYLGVKAQACVGGTSVREDQRVLQSGVHVVVGTPGRVFDLLRRQSLRADAIKMF 187
Query: 210 VLDEADEMLRMGFVEDVELILGKVKNVGQVQTLLFSATLPDWVKQIAAKFLKRDKKTADL 269
VLDEADEML GF + + I + + +VQ +FSAT+P +I KF+ +K L
Sbjct: 188 VLDEADEMLSRGFKDQIYDIFQLLPS--KVQVGVFSATMPPEALEITRKFM--NKPVRIL 243
Query: 270 VGNTKMKASTSVRHIVLPCTSSARSQLIPDIIRCYSSGGRTIIFTETKESASQLSQLLPG 329
V ++ + V + + + D+ + +++IF T+ L+ +
Sbjct: 244 VKRDELTLEGIKQFYVNVDKEEWKLETLCDLYETLAI-TQSVIFVNTRRKVDWLTDKMRS 302
Query: 330 ----ARALHGDIQQAQREVTLSGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVE 385
A HGD+ Q R++ + FRSG L+ T++ ARG+D+ V L+I + P E
Sbjct: 303 RDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPE 362
Query: 386 AYIHRSGRTGRAGNTGVAV 404
Y+HR GR+GR G GVA+
Sbjct: 363 NYLHRIGRSGRFGRKGVAI 381
>AT1G51380.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:19047960-19049967 FORWARD LENGTH=392
Length = 392
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 101/338 (29%), Positives = 162/338 (47%), Gaps = 35/338 (10%)
Query: 79 IQAMTFDTVLDGSDLVGRARTGQGKTLAFVLPILESLTNGPTKASRKTGYGRPPSVIVLL 138
IQ +L G D++ +A++G GKT + + + + +SRK V+VL
Sbjct: 48 IQQRALVPILKGRDVIAQAQSGTGKTSMIAISVCQIVN----ISSRKV------QVLVLS 97
Query: 139 PTRELACQVHADFEVYGGAMGLTSCCLYGGAPYQGQEMKLKRGVDVVIGTPGRIKDHIER 198
P+RELA Q + G + + GG KL+RGV V GTPGR+ D I+R
Sbjct: 98 PSRELASQTEKTIQAIGAHTNIQAHACIGGKSIGEDIKKLERGVHAVSGTPGRVYDMIKR 157
Query: 199 GNIDLSQLKFRVLDEADEMLRMGFVEDVELILGKVKNVGQVQTLLFSATLPDWVKQIAAK 258
G++ +K VLDE+DEML G + + + + + +Q L SATLP + ++ K
Sbjct: 158 GSLQTKAVKLLVLDESDEMLSKGLKDQIYDVYRALPH--DIQVCLISATLPQEILEMTEK 215
Query: 259 FL--------KRDKKTADLVGNTKMKASTSVRHIVLPCTSSARSQLIPDIIRCYSSGGRT 310
F+ K D+ T + + + C R + +
Sbjct: 216 FMTDPVRILVKPDELTLEGIKQYYVDVDKEEWKFDTLCDLYGRLTI-----------NQA 264
Query: 311 IIFTETKESASQLSQLLPGAR----ALHGDIQQAQREVTLSGFRSGKFMTLVATNVAARG 366
IIF T++ L++ + + ++HGD +Q +R+ ++ FRS K L+A++V ARG
Sbjct: 265 IIFCNTRQKVDWLTEKMRSSNFIVSSMHGDKRQKERDDIMNQFRSFKSRVLIASDVWARG 324
Query: 367 LDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAV 404
+D+ V +I + P + E YIHR GR GR G GVA+
Sbjct: 325 IDVQTVSHVINYDIPNNPELYIHRIGRAGRFGREGVAI 362
>AT5G65900.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr5:26358328-26361244 FORWARD LENGTH=633
Length = 633
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 113/348 (32%), Positives = 170/348 (48%), Gaps = 15/348 (4%)
Query: 68 LKEKGIVSLFPIQAMTFDTVLDGSDLVGRARTGQGKTLAFVLPILESLTNGPTKASRKTG 127
+KE G + IQA ++ G D++G ARTG GKTLAF++P +E L K + + G
Sbjct: 169 IKEMGFARMTQIQAKAIPPLMMGEDVLGAARTGSGKTLAFLIPAVELLYR--VKFTPRNG 226
Query: 128 YGRPPSVIVLLPTRELACQVHADFEVYGGAMGLTSCCLYGGAPYQGQEMKLKRGVDVVIG 187
G V+V+ PTRELA Q + + T + GG + + L +GV++++
Sbjct: 227 TG----VLVICPTRELAIQSYGVAKELLKYHSQTVGKVIGGEKRKTEAEILAKGVNLLVA 282
Query: 188 TPGRIKDHIERGN-IDLSQLKFRVLDEADEMLRMGFVEDVELILGKVKNVGQVQTLLFSA 246
TPGR+ DH+E N LKF V+DEAD +L F ED++ IL + Q T LFSA
Sbjct: 283 TPGRLLDHLENTNGFIFKNLKFLVMDEADRILEQNFEEDLKKILNLLPKTRQ--TSLFSA 340
Query: 247 TLPDWVKQIAAKFLKRDKKTADLVGNTKMKASTSVRHIVLPCTSSARSQLIPDIIRCYSS 306
T V+ +A L D+ K + + S+ R + ++ +
Sbjct: 341 TQSAKVEDLARVSLT-SPVYIDVDEGRKEVTNEGLEQGYCVVPSAMRLLFLLTFLKRFQG 399
Query: 307 GGRTIIFTETKESASQLSQLLPGAR----ALHGDIQQAQREVTLSGFRSGKFMTLVATNV 362
+ ++F T +S ++L + + G I Q +R T F + L+ TNV
Sbjct: 400 KKKIMVFFSTCKSTKFHAELFRYIKFDCLEIRGGIDQNKRTPTFLQFIKAETGILLCTNV 459
Query: 363 AARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRA-GNTGVAVMLYDP 409
AARGLD V I+Q +PP + YIHR GRT R G G A+++ P
Sbjct: 460 AARGLDFPHVDWIVQYDPPDNPTDYIHRVGRTARGEGAKGKALLVLTP 507
>AT3G09720.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:2980483-2983268
REVERSE LENGTH=541
Length = 541
Score = 146 bits (369), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 111/367 (30%), Positives = 173/367 (47%), Gaps = 41/367 (11%)
Query: 56 SKFRISGPLREMLKEKGIVSLFPIQAMTFDTVLDGSDLVGRARTGQGKTLAFVLPILESL 115
S++ G + L E G PIQ +L G + A TG GKT AF+ P+L L
Sbjct: 144 SRYGCEGYILRNLAELGFKEPTPIQRQAIPILLSGRECFACAPTGSGKTFAFICPMLIKL 203
Query: 116 TNGPTKASRKTGYGRPPSVIVLLPTRELACQVHAD-FEVYGGA---MGLTSCCLYGGAPY 171
T R ++L P RELA Q + ++ G+ + L + L A +
Sbjct: 204 KRPSTDGIR---------AVILSPARELAAQTAREGKKLIKGSNFHIRLMTKPLVKTADF 254
Query: 172 QGQEMKLKRGVDVVIGTPGRIKDHIERGNIDLSQLKFRVLDEADEMLRMGFVEDVELILG 231
K DV+I TP R+K I+ IDLS++++ VLDE+D++ ++ ++ ++
Sbjct: 255 S------KLWCDVLISTPMRLKRAIKAKKIDLSKVEYLVLDESDKLFEQSLLKQIDCVVK 308
Query: 232 KVKNVGQVQTLLFSATLPDWVKQIAAKFLKR-------DKKTADLVGNTKMKASTSVRHI 284
N +++L FSATLPD V+++A + K TA K+ + S
Sbjct: 309 ACSNPSIIRSL-FSATLPDSVEELARSIMHDAVRVIIGRKNTASETVKQKLVFAGSEEGK 367
Query: 285 VLPCTSSARSQLIPDIIRCYSSGGRTIIFTETKESASQLSQLLPG----ARALHGDIQQA 340
+L S L P ++ IF ++KE A +L L A +H D+
Sbjct: 368 LLALRQSFAESLNPPVL----------IFVQSKERAKELYDELKCENIRAGVIHSDLPPG 417
Query: 341 QREVTLSGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNT 400
+RE + FR+G+ L+AT+V ARG+D + +I + P AYIHR GR+GRAG +
Sbjct: 418 ERENAVDQFRAGEKWVLIATDVIARGMDFKGINCVINYDFPDSASAYIHRIGRSGRAGRS 477
Query: 401 GVAVMLY 407
G A+ Y
Sbjct: 478 GEAITFY 484
>AT5G54910.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr5:22298668-22301719 REVERSE LENGTH=739
Length = 739
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 113/358 (31%), Positives = 175/358 (48%), Gaps = 19/358 (5%)
Query: 60 ISGPLREMLKEKGIVSLFPIQAMTFDTVLDGSDLVGRARTGQGKTLAFVLPILESLTNGP 119
IS + LK+ V + +Q+ L G D++G ARTG GKTLAFV+PILE L
Sbjct: 78 ISDKTKRGLKDAKYVDMTDVQSAAIPHALCGRDILGAARTGSGKTLAFVIPILEKLHR-- 135
Query: 120 TKASRKTGYGRPPSVIVLLPTRELACQVHADFEVYGGAMGLTSCCLYGGAPYQGQEMKLK 179
+ S + G G I++ PTRELA Q G ++ L GG E +
Sbjct: 136 ERWSPEDGVG----CIIISPTRELAAQTFGVLNKVGKFHKFSAGLLIGGREGVDVEKERV 191
Query: 180 RGVDVVIGTPGRIKDHI-ERGNIDLSQLKFRVLDEADEMLRMGFVEDVELILGKVKNVGQ 238
+++++ PGR+ H+ E N + QL+ +LDEAD +L F ++ I+ ++
Sbjct: 192 HEMNILVCAPGRLLQHMDETPNFECPQLQILILDEADRVLDSAFKGQLDPIISQLPK--H 249
Query: 239 VQTLLFSATLPDWVKQIAAKFLKRDKKTADLVGNTKMKASTSVRHIVLPCTSSARSQLIP 298
QTLLFSAT VK +A L RD + + TS+ V+ + ++
Sbjct: 250 RQTLLFSATQTKKVKDLARLSL-RDPEYISVHAEAVTATPTSLMQTVMIVPVEKKLDMLW 308
Query: 299 DIIRCYSSGGRTIIFTETKESA----SQLSQLLPGA--RALHGDIQQAQREVTLSGFRSG 352
I+ + + R ++F TK+ ++L PG ++LHG + Q +R S F
Sbjct: 309 SFIKTHLN-SRILVFLSTKKQVKFVHEAFNKLRPGIPLKSLHGKMSQEKRMGVYSQFIER 367
Query: 353 KFMTLVATNVAARGLDIND-VQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLYDP 409
+ + L T+V ARGLD + V ++Q + P DV +YIHR GRT R G +++ P
Sbjct: 368 QSV-LFCTDVLARGLDFDKAVDWVVQVDCPEDVASYIHRVGRTARFYTQGKSLLFLTP 424
>AT3G13920.1 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translation
initiation factor 4A1 | chr3:4592635-4594128 REVERSE
LENGTH=412
Length = 412
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 97/319 (30%), Positives = 158/319 (49%), Gaps = 19/319 (5%)
Query: 90 GSDLVGRARTGQGKTLAFVLPILESLTNGPTKASRKTGYGRPPSVIVLLPTRELACQVHA 149
G D++ +A++G GKT F +L+ L + +VL PTRELA Q+
Sbjct: 76 GLDVIQQAQSGTGKTATFCSGVLQQLDFSLIQCQ----------ALVLAPTRELAQQIEK 125
Query: 150 DFEVYGGAMGLTSCCLYGGAPYQGQEMKLKRGVDVVIGTPGRIKDHIERGNIDLSQLKFR 209
G +G+ GG + + L+ GV VV+GTPGR+ D ++R ++ +K
Sbjct: 126 VMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLKRQSLRADNIKMF 185
Query: 210 VLDEADEMLRMGFVEDVELILGKVKNVGQVQTLLFSATLPDWVKQIAAKFLKRDKKTADL 269
VLDEADEML GF + + I + ++Q +FSAT+P +I KF+ + + L
Sbjct: 186 VLDEADEMLSRGFKDQIYDIFQLLP--PKIQVGVFSATMPPEALEITRKFMSKPVRI--L 241
Query: 270 VGNTKMKASTSVRHIVLPCTSSARSQLIPDIIRCYSSGGRTIIFTETKESASQLSQLLPG 329
V ++ + V + + + D+ + +++IF T+ L+ +
Sbjct: 242 VKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAI-TQSVIFVNTRRKVDWLTDKMRS 300
Query: 330 ----ARALHGDIQQAQREVTLSGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVE 385
A HGD+ Q R++ + FRSG L+ T++ ARG+D+ V L+I + P E
Sbjct: 301 RDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPE 360
Query: 386 AYIHRSGRTGRAGNTGVAV 404
Y+HR GR+GR G GVA+
Sbjct: 361 NYLHRIGRSGRFGRKGVAI 379
>AT3G13920.4 | Symbols: EIF4A1 | eukaryotic translation initiation
factor 4A1 | chr3:4592635-4594128 REVERSE LENGTH=407
Length = 407
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 97/319 (30%), Positives = 158/319 (49%), Gaps = 19/319 (5%)
Query: 90 GSDLVGRARTGQGKTLAFVLPILESLTNGPTKASRKTGYGRPPSVIVLLPTRELACQVHA 149
G D++ +A++G GKT F +L+ L + +VL PTRELA Q+
Sbjct: 71 GLDVIQQAQSGTGKTATFCSGVLQQLDFSLIQCQ----------ALVLAPTRELAQQIEK 120
Query: 150 DFEVYGGAMGLTSCCLYGGAPYQGQEMKLKRGVDVVIGTPGRIKDHIERGNIDLSQLKFR 209
G +G+ GG + + L+ GV VV+GTPGR+ D ++R ++ +K
Sbjct: 121 VMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLKRQSLRADNIKMF 180
Query: 210 VLDEADEMLRMGFVEDVELILGKVKNVGQVQTLLFSATLPDWVKQIAAKFLKRDKKTADL 269
VLDEADEML GF + + I + ++Q +FSAT+P +I KF+ + + L
Sbjct: 181 VLDEADEMLSRGFKDQIYDIFQLLP--PKIQVGVFSATMPPEALEITRKFMSKPVRI--L 236
Query: 270 VGNTKMKASTSVRHIVLPCTSSARSQLIPDIIRCYSSGGRTIIFTETKESASQLSQLLPG 329
V ++ + V + + + D+ + +++IF T+ L+ +
Sbjct: 237 VKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAI-TQSVIFVNTRRKVDWLTDKMRS 295
Query: 330 ----ARALHGDIQQAQREVTLSGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVE 385
A HGD+ Q R++ + FRSG L+ T++ ARG+D+ V L+I + P E
Sbjct: 296 RDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPE 355
Query: 386 AYIHRSGRTGRAGNTGVAV 404
Y+HR GR+GR G GVA+
Sbjct: 356 NYLHRIGRSGRFGRKGVAI 374
>AT3G13920.3 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translation
initiation factor 4A1 | chr3:4592635-4594094 REVERSE
LENGTH=402
Length = 402
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 97/319 (30%), Positives = 158/319 (49%), Gaps = 19/319 (5%)
Query: 90 GSDLVGRARTGQGKTLAFVLPILESLTNGPTKASRKTGYGRPPSVIVLLPTRELACQVHA 149
G D++ +A++G GKT F +L+ L + +VL PTRELA Q+
Sbjct: 66 GLDVIQQAQSGTGKTATFCSGVLQQLDFSLIQCQ----------ALVLAPTRELAQQIEK 115
Query: 150 DFEVYGGAMGLTSCCLYGGAPYQGQEMKLKRGVDVVIGTPGRIKDHIERGNIDLSQLKFR 209
G +G+ GG + + L+ GV VV+GTPGR+ D ++R ++ +K
Sbjct: 116 VMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLKRQSLRADNIKMF 175
Query: 210 VLDEADEMLRMGFVEDVELILGKVKNVGQVQTLLFSATLPDWVKQIAAKFLKRDKKTADL 269
VLDEADEML GF + + I + ++Q +FSAT+P +I KF+ + + L
Sbjct: 176 VLDEADEMLSRGFKDQIYDIFQLLP--PKIQVGVFSATMPPEALEITRKFMSKPVRI--L 231
Query: 270 VGNTKMKASTSVRHIVLPCTSSARSQLIPDIIRCYSSGGRTIIFTETKESASQLSQLLPG 329
V ++ + V + + + D+ + +++IF T+ L+ +
Sbjct: 232 VKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAI-TQSVIFVNTRRKVDWLTDKMRS 290
Query: 330 ----ARALHGDIQQAQREVTLSGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVE 385
A HGD+ Q R++ + FRSG L+ T++ ARG+D+ V L+I + P E
Sbjct: 291 RDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPE 350
Query: 386 AYIHRSGRTGRAGNTGVAV 404
Y+HR GR+GR G GVA+
Sbjct: 351 NYLHRIGRSGRFGRKGVAI 369
>AT3G13920.2 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translation
initiation factor 4A1 | chr3:4592586-4594128 REVERSE
LENGTH=415
Length = 415
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 97/319 (30%), Positives = 158/319 (49%), Gaps = 19/319 (5%)
Query: 90 GSDLVGRARTGQGKTLAFVLPILESLTNGPTKASRKTGYGRPPSVIVLLPTRELACQVHA 149
G D++ +A++G GKT F +L+ L + +VL PTRELA Q+
Sbjct: 76 GLDVIQQAQSGTGKTATFCSGVLQQLDFSLIQCQ----------ALVLAPTRELAQQIEK 125
Query: 150 DFEVYGGAMGLTSCCLYGGAPYQGQEMKLKRGVDVVIGTPGRIKDHIERGNIDLSQLKFR 209
G +G+ GG + + L+ GV VV+GTPGR+ D ++R ++ +K
Sbjct: 126 VMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLKRQSLRADNIKMF 185
Query: 210 VLDEADEMLRMGFVEDVELILGKVKNVGQVQTLLFSATLPDWVKQIAAKFLKRDKKTADL 269
VLDEADEML GF + + I + ++Q +FSAT+P +I KF+ + + L
Sbjct: 186 VLDEADEMLSRGFKDQIYDIFQLLPP--KIQVGVFSATMPPEALEITRKFMSKPVRI--L 241
Query: 270 VGNTKMKASTSVRHIVLPCTSSARSQLIPDIIRCYSSGGRTIIFTETKESASQLSQLLPG 329
V ++ + V + + + D+ + +++IF T+ L+ +
Sbjct: 242 VKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAI-TQSVIFVNTRRKVDWLTDKMRS 300
Query: 330 ----ARALHGDIQQAQREVTLSGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVE 385
A HGD+ Q R++ + FRSG L+ T++ ARG+D+ V L+I + P E
Sbjct: 301 RDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPE 360
Query: 386 AYIHRSGRTGRAGNTGVAV 404
Y+HR GR+GR G GVA+
Sbjct: 361 NYLHRIGRSGRFGRKGVAI 379
>AT3G18600.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:6399724-6403007
REVERSE LENGTH=568
Length = 568
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 118/349 (33%), Positives = 171/349 (48%), Gaps = 18/349 (5%)
Query: 68 LKEKGIVSLFPIQAMTFDTVLDGSDLVGRARTGQGKTLAFVLPILESLTNGPTKASRKTG 127
+KE G + IQA + +L+G D++G ARTG GKTLAF++P +E L + S + G
Sbjct: 104 IKEMGFQYMTQIQAGSIQPLLEGKDVLGAARTGSGKTLAFLIPAVELLFK--ERFSPRNG 161
Query: 128 YGRPPSVIVLLPTRELACQVHADFEVYGGAMGLTSCCLYGGAPYQGQEMKLKRGVDVVIG 187
G VIV+ PTRELA Q E T + GG + + ++ G ++VI
Sbjct: 162 TG----VIVICPTRELAIQTKNVAEELLKHHSQTVSMVIGGNNRRSEAQRIASGSNLVIA 217
Query: 188 TPGRIKDHIERGNIDL-SQLKFRVLDEADEMLRMGFVEDVELILGKVKNVGQVQTLLFSA 246
TPGR+ DH++ + LK V+DEAD +L F ED+ IL + Q T LFSA
Sbjct: 218 TPGRLLDHLQNTKAFIYKHLKCLVIDEADRILEENFEEDMNKILKILPKTRQ--TALFSA 275
Query: 247 TLPDWVKQIAAKFLKRDKKTADLVGNTKM-KASTSVRHIVLPCTSSARSQLIPDIIRCYS 305
T VK +A L G K+ + V+P S R L+ ++ +
Sbjct: 276 TQTSKVKDLARVSLTSPVHVDVDDGRRKVTNEGLEQGYCVVP--SKQRLILLISFLK-KN 332
Query: 306 SGGRTIIFTETKESASQLSQLLP----GARALHGDIQQAQREVTLSGFRSGKFMTLVATN 361
+ ++F T +S ++++ +HG + Q +R T F K L+ T+
Sbjct: 333 LNKKIMVFFSTCKSVQFHTEIMKISDVDVSDIHGGMDQNRRTKTFFDFMKAKKGILLCTD 392
Query: 362 VAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRA-GNTGVAVMLYDP 409
VAARGLDI V IIQ +PP YIHR GRT R G G A+++ P
Sbjct: 393 VAARGLDIPSVDWIIQYDPPDKPTEYIHRVGRTARGEGAKGKALLVLIP 441
>AT1G54270.1 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-20262018
FORWARD LENGTH=412
Length = 412
Score = 142 bits (357), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 97/319 (30%), Positives = 156/319 (48%), Gaps = 19/319 (5%)
Query: 90 GSDLVGRARTGQGKTLAFVLPILESLTNGPTKASRKTGYGRPPSVIVLLPTRELACQVHA 149
G D++ +A++G GKT F +L+ L + +VL PTRELA Q+
Sbjct: 76 GLDVIQQAQSGTGKTATFCSGVLQQLDYALLQCQ----------ALVLAPTRELAQQIEK 125
Query: 150 DFEVYGGAMGLTSCCLYGGAPYQGQEMKLKRGVDVVIGTPGRIKDHIERGNIDLSQLKFR 209
G G+ GG + + L+ GV VV+GTPGR+ D + R ++ +K
Sbjct: 126 VMRALGDYQGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDCIKMF 185
Query: 210 VLDEADEMLRMGFVEDVELILGKVKNVGQVQTLLFSATLPDWVKQIAAKFLKRDKKTADL 269
VLDEADEML GF + + I + ++Q +FSAT+P +I KF+ + + L
Sbjct: 186 VLDEADEMLSRGFKDQIYDIFQLLPP--KIQVGVFSATMPPEALEITRKFMSKPVRI--L 241
Query: 270 VGNTKMKASTSVRHIVLPCTSSARSQLIPDIIRCYSSGGRTIIFTETKESASQLSQLLPG 329
V ++ + V + + + D+ + +++IF T+ L+ +
Sbjct: 242 VKRDELTLEGIKQFYVNVEKEDWKLETLCDLYETLAIT-QSVIFVNTRRKVDWLTDKMRS 300
Query: 330 ----ARALHGDIQQAQREVTLSGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVE 385
A HGD+ Q R++ + FRSG L+ T++ ARG+D+ V L+I + P E
Sbjct: 301 RDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPE 360
Query: 386 AYIHRSGRTGRAGNTGVAV 404
Y+HR GR+GR G GVA+
Sbjct: 361 NYLHRIGRSGRFGRKGVAI 379
>AT4G09730.1 | Symbols: RH39 | RH39 | chr4:6136333-6139510 FORWARD
LENGTH=621
Length = 621
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 115/377 (30%), Positives = 180/377 (47%), Gaps = 22/377 (5%)
Query: 47 VKKEDPNAVSKFRISGPLREM---LKEKGIVSLFPIQAMTFDTVLDGSDLVGRARTGQGK 103
++K+ V F+ G E+ L+E I IQ + V++ +V + TG GK
Sbjct: 103 IRKKSKKLVENFQELGLSEEVMGALQELNIEVPTEIQCIGIPAVMERKSVVLGSHTGSGK 162
Query: 104 TLAFVLPILESLTNGPTKASRKTGYGRPPSVIVLLPTRELACQVHADFEVYGGAMGLTSC 163
TLA++LPI++ + +KT RP +V VL PTREL+ QV+ + S
Sbjct: 163 TLAYLLPIVQLMREDEANLGKKTKPRRPRTV-VLCPTRELSEQVYRVAKSISHHARFRSI 221
Query: 164 CLYGGAPYQGQEMKLKRGVDVVIGTPGRIKDHIERGNIDLSQLKFRVLDEADEMLRMGFV 223
+ GG+ + QE L +D+V+GTPGRI HIE GN+ + + VLDEAD M GF
Sbjct: 222 LVSGGSRIRPQEDSLNNAIDMVVGTPGRILQHIEEGNMVYGDIAYLVLDEADTMFDRGFG 281
Query: 224 EDVELILGKVK------NVGQVQTLLFSATLPDWVKQIAAKFLKRDKKTADLVGNTKMKA 277
++ L + N QT+L +AT+ V+++ + + L +T K
Sbjct: 282 PEIRKFLAPLNQRALKTNDQGFQTVLVTATMTMAVQKLVDEEF---QGIEHLRTSTLHKK 338
Query: 278 STSVRH--IVLPCTSSARSQLIPDIIRCYSSGGRTIIFTETKESASQLSQLLPGAR---- 331
+ RH I L L+ + + G + ++F T S+ + L +
Sbjct: 339 IANARHDFIKLSGGEDKLEALLQVLEPSLAKGSKVMVFCNTLNSSRAVDHYLSENQISTV 398
Query: 332 ALHGDIQQAQREVTLSGFR--SGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIH 389
HG++ QR L F+ G TLV T++AARGLD+ DV ++ + P++ Y+H
Sbjct: 399 NYHGEVPAEQRVENLKKFKDEEGDCPTLVCTDLAARGLDL-DVDHVVMFDFPKNSIDYLH 457
Query: 390 RSGRTGRAGNTGVAVML 406
R+GRT R G G L
Sbjct: 458 RTGRTARMGAKGKVTSL 474
>AT1G54270.2 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-20262018
FORWARD LENGTH=407
Length = 407
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 97/319 (30%), Positives = 156/319 (48%), Gaps = 19/319 (5%)
Query: 90 GSDLVGRARTGQGKTLAFVLPILESLTNGPTKASRKTGYGRPPSVIVLLPTRELACQVHA 149
G D++ +A++G GKT F +L+ L + +VL PTRELA Q+
Sbjct: 71 GLDVIQQAQSGTGKTATFCSGVLQQLDYALLQCQ----------ALVLAPTRELAQQIEK 120
Query: 150 DFEVYGGAMGLTSCCLYGGAPYQGQEMKLKRGVDVVIGTPGRIKDHIERGNIDLSQLKFR 209
G G+ GG + + L+ GV VV+GTPGR+ D + R ++ +K
Sbjct: 121 VMRALGDYQGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDCIKMF 180
Query: 210 VLDEADEMLRMGFVEDVELILGKVKNVGQVQTLLFSATLPDWVKQIAAKFLKRDKKTADL 269
VLDEADEML GF + + I + ++Q +FSAT+P +I KF+ + + L
Sbjct: 181 VLDEADEMLSRGFKDQIYDIFQLLP--PKIQVGVFSATMPPEALEITRKFMSKPVRI--L 236
Query: 270 VGNTKMKASTSVRHIVLPCTSSARSQLIPDIIRCYSSGGRTIIFTETKESASQLSQLLPG 329
V ++ + V + + + D+ + +++IF T+ L+ +
Sbjct: 237 VKRDELTLEGIKQFYVNVEKEDWKLETLCDLYETLAIT-QSVIFVNTRRKVDWLTDKMRS 295
Query: 330 ----ARALHGDIQQAQREVTLSGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVE 385
A HGD+ Q R++ + FRSG L+ T++ ARG+D+ V L+I + P E
Sbjct: 296 RDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPE 355
Query: 386 AYIHRSGRTGRAGNTGVAV 404
Y+HR GR+GR G GVA+
Sbjct: 356 NYLHRIGRSGRFGRKGVAI 374
>AT2G40700.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:16976783-16979392
FORWARD LENGTH=609
Length = 609
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 116/432 (26%), Positives = 190/432 (43%), Gaps = 82/432 (18%)
Query: 54 AVSKFRISGPLREMLKEK-GIVSLFPIQAMTFDTVLDGSDLVGRARTGQGKTLAFVLPIL 112
+ S + L + LKE+ G + +QA +L G D++ A TG GKT+A++ P++
Sbjct: 30 SFSSLGLDTKLSDQLKERMGFEAPTLVQAQAIPVILSGRDVLVNAPTGTGKTIAYLAPLI 89
Query: 113 ESLTNGPTKASRKTGYGRPPSVIVLLPTRELACQVHADFE-VYGGAMGLTSCCLYGGAPY 171
L K R G +V++PTREL QV+ E + + + GG
Sbjct: 90 HHLQGHSPKVDRSHG----TFALVIVPTRELCLQVYETLEKLLHRFHWIVPGYVMGGEKK 145
Query: 172 QGQEMKLKRGVDVVIGTPGRIKDHIER-GNIDLSQLKFRVLDEADEMLRMGFVEDVELI- 229
++ +L++G+ ++I TPGR+ DH++ + L++ + DEAD +L +G+ +++E I
Sbjct: 146 AKEKARLRKGISILIATPGRLLDHLKNTASFVHKNLRWVIFDEADSILELGYGKEIEQII 205
Query: 230 --LGKVKNVG-----------QVQTLLFSATLPDWVKQIAAKFLKRDKKTADLVGNTKMK 276
LG +N Q Q LL SATL D V +A L D + NTK++
Sbjct: 206 KLLGSGQNEQGEEDDIVPKGIQKQNLLLSATLNDKVNDLAK--LSLDDPVMIGLDNTKLQ 263
Query: 277 ASTSVRH----------IVLPCTSSAR---------SQLIPDIIRC-------------- 303
+ S+ +V+ SA SQL+ +R
Sbjct: 264 QNLSIESPAAPDSDAEDMVIHVNKSANPLSEDYGIPSQLVQRYLRVPCGARLVALLSVLK 323
Query: 304 ----YSSGGRTIIFTETKESASQLSQLL------PGARA----------------LHGDI 337
+ + ++F T+++ LL P + LHG +
Sbjct: 324 NLFEREASQKVVVFFSTRDAVDFHYSLLSEFQWPPNSETEEEGTKELFLKCKTFRLHGSM 383
Query: 338 QQAQREVTLSGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRA 397
+Q R F++ K L++T+VAARGLD V+ IIQ + P + Y+HR GRT R
Sbjct: 384 EQEDRRSAFGTFKTEKQAVLLSTDVAARGLDFPKVRCIIQYDCPGEATEYVHRVGRTARI 443
Query: 398 GNTGVAVMLYDP 409
G G A++ P
Sbjct: 444 GEKGEALLFLQP 455
>AT3G16840.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:5738020-5743042
REVERSE LENGTH=826
Length = 826
Score = 135 bits (340), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 115/401 (28%), Positives = 178/401 (44%), Gaps = 78/401 (19%)
Query: 79 IQAMTFD-TVLDGSDLVGRARTGQGKTLAFVLPILESLTNGPTKASR------------- 124
IQ F+ G D++G A TG GKTLAF LPIL+ L + K +
Sbjct: 216 IQKACFNVAAYQGKDVIGAAETGSGKTLAFGLPILQRLLDEREKVGKLYALKGEEAQKYA 275
Query: 125 KTGYGRPPSVIVLLPTRELACQVHADFEVYGGAMGLTSCCLYGGAPYQGQEMKLKRGVDV 184
GY R +++ PTRELA QV E + + + GG + QE +LK ++
Sbjct: 276 ADGYLR---ALIITPTRELALQVTEHLENAAKNLSVKVVPIVGGMFSEKQERRLKEKPEI 332
Query: 185 VIGTPGRIKDHIERGN---IDLSQLKFRVLDEADEMLRMGFVEDVELIL----------- 230
V+ TPGR+ + + G ++L L F VLDEAD M+ G +++ IL
Sbjct: 333 VVATPGRLWELMSAGEKHLVELHSLSFFVLDEADRMVERGHFRELQSILDLLPVTDKPNE 392
Query: 231 GKVKNVG-----------QVQTLLFSATLPDWVKQIAAKFLKRDKK-------------T 266
GK + V + QT +FSAT+ +++ F K+ K+
Sbjct: 393 GKTQTVKSNDTVLNVPKKKRQTFVFSATIA-----LSSDFRKKLKRGSSKSKQSSSGEVN 447
Query: 267 ADLVGNTKMKASTSVRHIVLPCTSSARSQLIPDIIRCYSS--------------GGRTII 312
+ V + + +V I L TS ++ I+C GRTI+
Sbjct: 448 SIEVLSERAGMRDNVAIIDLTTTSILAPKIEESFIKCEEKEKDAYLYYILSVHGQGRTIV 507
Query: 313 FTETKESASQLSQLLP----GARALHGDIQQAQREVTLSGFRSGKFMTLVATNVAARGLD 368
F + +S LL L +++Q R ++ FR+ + L+AT++ ARG+D
Sbjct: 508 FCTSVTDLRHISGLLKILGLDVCTLFSEMKQRARLKSIDRFRASENGILIATDLVARGID 567
Query: 369 INDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLYDP 409
I +V+ II + P E Y+HR GRT RA G ++ L +P
Sbjct: 568 IKNVRTIIHYKLPHSAEVYVHRCGRTARAFADGCSIALIEP 608
>AT4G15850.1 | Symbols: ATRH1, RH1 | RNA helicase 1 |
chr4:9001426-9004534 FORWARD LENGTH=522
Length = 522
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 109/410 (26%), Positives = 180/410 (43%), Gaps = 77/410 (18%)
Query: 64 LREMLKEKGIVSLFPIQ-AMTFDTVLDGS---DLVGRARTGQGKTLAFVLPILESLTNGP 119
L++ L+ GI SLFP+Q A+ +T+ G D+ + TG GKTL++ LPI++ L + P
Sbjct: 42 LKKALENMGISSLFPVQVAVWHETIGPGGFERDICVNSPTGSGKTLSYALPIVQLLASRP 101
Query: 120 TKASRKTGYGRPPSVIVLLPTRELACQVHADFEVYGGAMGLTSCCLYGGAPYQGQ----- 174
+ R +V+LPTR+LA QV F+ A+GL+ G + G+
Sbjct: 102 VRCLR---------ALVVLPTRDLALQVKDVFDAIAPAVGLSVGSAVGQSSIAGEISQLI 152
Query: 175 ----------------EMKLKRGVDVVIGTPGRIKDHIERGN-IDLSQLKFRVLDEADEM 217
L+ VD+++ TPGR+ DHI L L++ V+DE D +
Sbjct: 153 KTPKLDAGICYDPDDLSQNLESAVDILVATPGRLMDHINNTKGFTLEHLRYLVVDETDRL 212
Query: 218 LRMGFVEDVELILGKVKN----------------VGQVQTLLFSAT--------LPDWVK 253
LR + + +L + G +QT+ + P VK
Sbjct: 213 LREAYQSWLPTVLQLTQTSDDSLFPSFTPFVPSAFGSLQTVRRQSVERGFKGKPYPRLVK 272
Query: 254 QIAAKFLKRDKKTA---DL-------VGNTKMKASTSVRHIVLPCTSSARSQLIPDIIRC 303
+ + L +D DL G ++ + + + L C + + + +++
Sbjct: 273 MVLSATLTQDPSKLIQLDLHHPLFMTTGGSRYRLPEKLECLRLICETGMKPVYLVALLKS 332
Query: 304 YSSGGRTIIFTETKESASQLSQLLP-------GARALHGDIQQAQREVTLSGFRSGKFMT 356
+ G + IIFT + E+ +L +LL A+ G + Q+ R L FR G
Sbjct: 333 WE-GEKCIIFTSSVETTRRLCKLLNFFGDPKIKAKEYSGGLNQSLRSKELKAFRKGDIQV 391
Query: 357 LVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVML 406
LVA++ RG+D+ V +I + P + +IHR+GRT RAG G L
Sbjct: 392 LVASDALTRGMDVKGVTNVINYDMPPFAKTFIHRAGRTARAGQAGRCFTL 441
>AT3G53110.1 | Symbols: LOS4 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr3:19687968-19690423 FORWARD LENGTH=496
Length = 496
Score = 129 bits (323), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 113/358 (31%), Positives = 163/358 (45%), Gaps = 55/358 (15%)
Query: 79 IQAMTFDTVLD--GSDLVGRARTGQGKTLAFVLPILESLTNGPTKASRKTGYGRPPSVIV 136
IQA++ ++ L+ +A G GKT FVL +L SR R P +
Sbjct: 118 IQAISLPMIMTPPHKHLIAQAHNGSGKTTCFVLGML----------SRVDPTLREPQALC 167
Query: 137 LLPTRELACQVHADFEVYGGAMGLTSCCLYG----GAPYQGQEMKLKRGVDVVIGTPGRI 192
+ PTRELA Q + G G+T+ GAP + + VVIGTPG +
Sbjct: 168 ICPTRELANQNMEVLQKMGKFTGITAELAVPDSTRGAPAATRGAPV--SAHVVIGTPGTL 225
Query: 193 KDHIERGNIDLSQLKFRVLDEADEMLRM-GFVEDVELILGKVKNVGQV----QTLLFSAT 247
K + + L+ LK V DEAD ML GF +D I+ K++G+V Q LLFSAT
Sbjct: 226 KKWMAFKRLGLNHLKILVFDEADHMLATDGFRDDSLKIM---KDIGRVNPNFQVLLFSAT 282
Query: 248 LPDWVKQIAAK--------FLKRDKKTADLVGNTKMKASTSVRHIVLPCTSSARSQLIPD 299
+ VK A+ F+KR+ D V K +V P + ++I D
Sbjct: 283 FNETVKDFVARTVKDPNQLFVKREDLALDSVKQYK---------VVCP-KEQNKIEVIKD 332
Query: 300 IIRCYSSGGRTIIFTETKESASQLSQLLP----GARALHGDIQQAQREVTLSGFRSGKFM 355
I G+TIIF +TK SA ++ + L ++HG++ ++ R+ + F+
Sbjct: 333 QIMELGDIGQTIIFVKTKASAQKVHKALAEMGYDVTSVHGNLTESDRDKIVKEFKECLTQ 392
Query: 356 TLVATNVAARGLDINDVQLIIQCEPPR-------DVEAYIHRSGRTGRAGNTGVAVML 406
L+AT+V ARG D V L++ P D E Y+HR GR GR G G L
Sbjct: 393 VLIATDVIARGFDQQRVNLVVNYNLPTKYETGEPDYEVYLHRVGRAGRFGRKGAVFNL 450
>AT1G12770.1 | Symbols: ISE1, EMB1586 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr1:4351888-4353543 FORWARD LENGTH=551
Length = 551
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 112/398 (28%), Positives = 176/398 (44%), Gaps = 59/398 (14%)
Query: 64 LREMLKEKGIVSLFPIQAMTFDTVLDGSDLVGRARTGQGKTLAFVLPILESLTNGPTKAS 123
L + L+ +G +Q+ ++ G D V ++ TG GKTLA++LPIL + GP
Sbjct: 121 LLDSLEREGFSVPTDVQSAAVPAIIKGHDAVIQSYTGSGKTLAYLLPILSEI--GPLAEK 178
Query: 124 RKTGYGRPPS-----VIVLLPTRELACQVHADFE-VYGGAMGLTSCCLYGGAPYQGQEMK 177
++ + +++ P+REL Q+ + E + G L GGA QE
Sbjct: 179 SRSSHSENDKRTEIQAMIVAPSRELGMQIVREVEKLLGPVHRRMVQQLVGGANRMRQEEA 238
Query: 178 LKRGVD-VVIGTPGRIKDHIERGNIDLSQLKFRVLDEADEMLRMGFVEDVELIL------ 230
LK+ +V+GTPGRI + + G + +F VLDE DE+L F ED+ IL
Sbjct: 239 LKKNKPAIVVGTPGRIAEISKGGKLHTHGCRFLVLDEVDELLSFNFREDIHRILEHVGKR 298
Query: 231 ------GKVKNVGQVQTLLFSATLPDWVKQIAAKF-----LKRDKKTADLVGNTKMKAST 279
G+V QT+L SAT+P V + A + L + K L ++ S
Sbjct: 299 SGAGPKGEVDERANRQTILVSATVPFSVIRAAKSWSHEPVLVQANKVTPL---DTVQPSA 355
Query: 280 SVRHIVLPCTSSARSQL------IPDIIRCYSSGGR-------------------TIIFT 314
V + P TS A Q+ +P ++ Y + I F
Sbjct: 356 PVMSLT-PTTSEADGQIQTTIQSLPPALKHYYCISKHQHKVDTLRRCVHALDAQSVIAFM 414
Query: 315 ----ETKESASQLSQLLPGARALHGDIQQAQREVTLSGFRSGKFMTLVATNVAARGLDIN 370
+ K+ +L + +HGD+ + R L F++G+ LV ++ARGLD+
Sbjct: 415 NHSRQLKDVVYKLEARGMNSAEMHGDLGKLGRSTVLKKFKNGEIKVLVTNELSARGLDVA 474
Query: 371 DVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLYD 408
+ L++ E P D Y HR+GRTGR G G V + +
Sbjct: 475 ECDLVVNLELPTDAVHYAHRAGRTGRLGRKGTVVTVCE 512
>AT5G11170.1 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3553334-3556646 FORWARD LENGTH=427
Length = 427
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/322 (27%), Positives = 157/322 (48%), Gaps = 22/322 (6%)
Query: 90 GSDLVGRARTGQGKTLAFVLPILESLTNGPTKASRKTGYGRPPSVIVLLPTRELACQVHA 149
G D++ +A++G GKT FVL L+ + P + S +VL TRELA Q+
Sbjct: 83 GMDVICQAKSGMGKTAVFVLSTLQQIEPSPGQVS----------ALVLCHTRELAYQICN 132
Query: 150 DFEVYGGAMGLTSC-CLYGGAPYQGQEMKLKRGV-DVVIGTPGRIKDHIERGNIDLSQLK 207
+F + + T YGG + + LK +V+GTPGR+ ++ L ++
Sbjct: 133 EFVRFSTYLPDTKVSVFYGGVNIKIHKDLLKNECPHIVVGTPGRVLALAREKDLSLKNVR 192
Query: 208 FRVLDEADEMLR-MGFVEDVELILGKVKNVGQVQTLLFSATLPDWVKQIAAKFLKRDKKT 266
+LDE D+ML + DV+ I + QV ++FSATL ++ + KF++ D
Sbjct: 193 HFILDECDKMLESLDMRRDVQEIFKMTPHDKQV--MMFSATLSKEIRPVCKKFMQ-DPME 249
Query: 267 ADLVGNTKMKASTSVRHIVLPCTSSARSQLIPDIIRCYSSGGRTIIFTETKESASQLSQL 326
+ K+ V+H + + +++ + D++ + +IF ++ A++L++L
Sbjct: 250 IYVDDEAKLTLHGLVQHYI-KLSEMEKNRKLNDLLDALDFN-QVVIFVKSVSRAAELNKL 307
Query: 327 LPGAR----ALHGDIQQAQREVTLSGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPR 382
L +H + Q +R F+ G LVAT++ RG+DI V ++I + P
Sbjct: 308 LVECNFPSICIHSGMSQEERLTRYKSFKEGHKRILVATDLVGRGIDIERVNIVINYDMPD 367
Query: 383 DVEAYIHRSGRTGRAGNTGVAV 404
+ Y+HR GR GR G G+A+
Sbjct: 368 SADTYLHRVGRAGRFGTKGLAI 389
>AT5G11200.1 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3567389-3570686 FORWARD LENGTH=427
Length = 427
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/322 (27%), Positives = 157/322 (48%), Gaps = 22/322 (6%)
Query: 90 GSDLVGRARTGQGKTLAFVLPILESLTNGPTKASRKTGYGRPPSVIVLLPTRELACQVHA 149
G D++ +A++G GKT FVL L+ + P + S +VL TRELA Q+
Sbjct: 83 GMDVICQAKSGMGKTAVFVLSTLQQIEPSPGQVS----------ALVLCHTRELAYQICN 132
Query: 150 DFEVYGGAMGLTSC-CLYGGAPYQGQEMKLKRGV-DVVIGTPGRIKDHIERGNIDLSQLK 207
+F + + T YGG + + LK +V+GTPGR+ ++ L ++
Sbjct: 133 EFVRFSTYLPDTKVSVFYGGVNIKIHKDLLKNECPHIVVGTPGRVLALAREKDLSLKNVR 192
Query: 208 FRVLDEADEMLR-MGFVEDVELILGKVKNVGQVQTLLFSATLPDWVKQIAAKFLKRDKKT 266
+LDE D+ML + DV+ I + QV ++FSATL ++ + KF++ D
Sbjct: 193 HFILDECDKMLESLDMRRDVQEIFKMTPHDKQV--MMFSATLSKEIRPVCKKFMQ-DPME 249
Query: 267 ADLVGNTKMKASTSVRHIVLPCTSSARSQLIPDIIRCYSSGGRTIIFTETKESASQLSQL 326
+ K+ V+H + + +++ + D++ + +IF ++ A++L++L
Sbjct: 250 IYVDDEAKLTLHGLVQHYI-KLSEMEKNRKLNDLLDALDFN-QVVIFVKSVSRAAELNKL 307
Query: 327 LPGAR----ALHGDIQQAQREVTLSGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPR 382
L +H + Q +R F+ G LVAT++ RG+DI V ++I + P
Sbjct: 308 LVECNFPSICIHSGMSQEERLTRYKSFKEGHKRILVATDLVGRGIDIERVNIVINYDMPD 367
Query: 383 DVEAYIHRSGRTGRAGNTGVAV 404
+ Y+HR GR GR G G+A+
Sbjct: 368 SADTYLHRVGRAGRFGTKGLAI 389
>AT5G11170.2 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3554272-3556646 FORWARD LENGTH=344
Length = 344
Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 89/320 (27%), Positives = 156/320 (48%), Gaps = 22/320 (6%)
Query: 92 DLVGRARTGQGKTLAFVLPILESLTNGPTKASRKTGYGRPPSVIVLLPTRELACQVHADF 151
D++ +A++G GKT FVL L+ + P + S +VL TRELA Q+ +F
Sbjct: 2 DVICQAKSGMGKTAVFVLSTLQQIEPSPGQVS----------ALVLCHTRELAYQICNEF 51
Query: 152 EVYGGAMGLTSC-CLYGGAPYQGQEMKLKRGV-DVVIGTPGRIKDHIERGNIDLSQLKFR 209
+ + T YGG + + LK +V+GTPGR+ ++ L ++
Sbjct: 52 VRFSTYLPDTKVSVFYGGVNIKIHKDLLKNECPHIVVGTPGRVLALAREKDLSLKNVRHF 111
Query: 210 VLDEADEMLR-MGFVEDVELILGKVKNVGQVQTLLFSATLPDWVKQIAAKFLKRDKKTAD 268
+LDE D+ML + DV+ I + QV ++FSATL ++ + KF++ D
Sbjct: 112 ILDECDKMLESLDMRRDVQEIFKMTPHDKQV--MMFSATLSKEIRPVCKKFMQ-DPMEIY 168
Query: 269 LVGNTKMKASTSVRHIVLPCTSSARSQLIPDIIRCYSSGGRTIIFTETKESASQLSQLLP 328
+ K+ V+H + + +++ + D++ + +IF ++ A++L++LL
Sbjct: 169 VDDEAKLTLHGLVQHYI-KLSEMEKNRKLNDLLDALD-FNQVVIFVKSVSRAAELNKLLV 226
Query: 329 GAR----ALHGDIQQAQREVTLSGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDV 384
+H + Q +R F+ G LVAT++ RG+DI V ++I + P
Sbjct: 227 ECNFPSICIHSGMSQEERLTRYKSFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSA 286
Query: 385 EAYIHRSGRTGRAGNTGVAV 404
+ Y+HR GR GR G G+A+
Sbjct: 287 DTYLHRVGRAGRFGTKGLAI 306
>AT3G06980.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:2201531-2204662 FORWARD LENGTH=781
Length = 781
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 104/359 (28%), Positives = 166/359 (46%), Gaps = 36/359 (10%)
Query: 68 LKEKGIVSLFPIQAMTFDTVLDGSDLVGRARTGQGKTLAFVLPILESLTNGPTKASRKTG 127
LKE+ IQAM F V+DG + ++G GKTLA+++P+++ L + K+
Sbjct: 389 LKEQNFDRPAHIQAMAFSPVIDGKSCIIADQSGSGKTLAYLVPVIQRLREEELQGHSKSS 448
Query: 128 YGRPPSVIVLLPTRELACQVHADFE-VYGGAMGLTSCCLYGGAPYQGQEMKLKRGVDVVI 186
G P VIVL+PT ELA QV A+ + + S + GG + Q L++GVDV+I
Sbjct: 449 PG-CPRVIVLVPTAELASQVLANCRSISKSGVPFRSMVVTGGFRQRTQLENLEQGVDVLI 507
Query: 187 GTPGRIKDHIERGNIDLSQLKFRVLDEADEMLRMGFVED-VELILGKVKNVGQV--QTLL 243
TPGR + G + LS L+ +LDE D + F +D E L + N V Q L
Sbjct: 508 ATPGRFTYLMNEGILGLSNLRCAILDEVDIL----FGDDEFEAALQNLINSSPVTAQYLF 563
Query: 244 FSATLPDWVKQIAAKFLKRDKKTADLVGNTKMKASTSVRHIVLPCTSSARSQLIPDI--- 300
+ATLP +I K ++ ++G + S ++ ++ C+ ++ P+
Sbjct: 564 VTATLP---LEIYNKLVEVFPDCEVVMGPRVHRVSNALEEFLVDCSGDDNAEKTPETAFQ 620
Query: 301 --------IRCYSSGGRTIIFTETKESASQLSQLLP----GARAL-----HGDIQQAQRE 343
I + +TIIF E+ ++ + R L H + Q R
Sbjct: 621 NKKTALLQIMEENPVSKTIIFCNKIETCRKVENIFKRVDRKERQLHVLPFHAALSQESRL 680
Query: 344 VTLSGFRSGK----FMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAG 398
+ F S + + LV T+ A+RG+D + V ++ + PRD Y+ R GRT R
Sbjct: 681 TNMQEFTSSQPEENSLFLVCTDRASRGIDFSGVDHVVLFDFPRDPSEYVRRVGRTARGA 739
>AT5G11200.3 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3567389-3570686 FORWARD LENGTH=468
Length = 468
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/360 (26%), Positives = 154/360 (42%), Gaps = 57/360 (15%)
Query: 90 GSDLVGRARTGQGKTLAFVLPILESLTNGPTKASRKTGYGRPPSVIVLLPTRELACQVHA 149
G D++ +A++G GKT FVL L+ + P + S +VL TRELA Q+
Sbjct: 83 GMDVICQAKSGMGKTAVFVLSTLQQIEPSPGQVS----------ALVLCHTRELAYQICN 132
Query: 150 DFEVYGGAMGLTSC-CLYGGAPYQGQEMKLKRGV-DVVIGTPGRIKDHIERGNIDLSQLK 207
+F + + T YGG + + LK +V+GTPGR+ ++ L ++
Sbjct: 133 EFVRFSTYLPDTKVSVFYGGVNIKIHKDLLKNECPHIVVGTPGRVLALAREKDLSLKNVR 192
Query: 208 FRVLDEADEMLR-MGFVEDVELILGKVKNVGQVQTLLFSATLPDWVKQIAAKFLKRDKKT 266
+LDE D+ML + DV+ I + QV ++FSATL ++ + KF++ +T
Sbjct: 193 HFILDECDKMLESLDMRRDVQEIFKMTPHDKQV--MMFSATLSKEIRPVCKKFMQDGLRT 250
Query: 267 ADLVGNTKMKASTSVRHIVLPCTSSARSQL-IP---DIIRCYSSG--------------- 307
+ V P AR L +P D + Y
Sbjct: 251 LSGDSVALWWVGFGSGYCVFPRFHRARMGLNVPSNIDPMEIYVDDEAKLTLHGLVQHYIK 310
Query: 308 -------------------GRTIIFTETKESASQLSQLLPGAR----ALHGDIQQAQREV 344
+ +IF ++ A++L++LL +H + Q +R
Sbjct: 311 LSEMEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLT 370
Query: 345 TLSGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAV 404
F+ G LVAT++ RG+DI V ++I + P + Y+HR GR GR G G+A+
Sbjct: 371 RYKSFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAI 430
>AT1G71280.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:26870262-26872152 REVERSE LENGTH=465
Length = 465
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 98/336 (29%), Positives = 156/336 (46%), Gaps = 53/336 (15%)
Query: 49 KEDPNAVSKFR--ISGPLREMLKEKGIVSLFPIQAMTFDTVLDGSDLVGRARTGQGKTLA 106
+E P S+ + +S + E L G P+QA T + D+V A TG GKTLA
Sbjct: 11 EEAPPRFSELKPPLSEDIIEALDRSGFEVCTPVQAETIPFLCSHKDVVVDAATGSGKTLA 70
Query: 107 FVLPILESL---TNGPTKASRKTGYGRPPSVIVLLPTRELACQVHADFEVYGGAMGLTSC 163
F+LP +E + + P K + G +++ PTREL+ Q+H +V +
Sbjct: 71 FLLPFIEIIRRSNSYPPKPHQVMG-------VIISPTRELSAQIH---KVARAVRLDFAK 120
Query: 164 CLYGGAPYQGQEMKLKRGVDVVIGTPGRIKDHIERGN-IDLSQLKFRVLDEADEMLRMGF 222
C A E + G +++IGTPGR+ D ++R +D L+ +LDEAD +L MGF
Sbjct: 121 CREVEADMNTLE---EEGANLLIGTPGRLSDMMKRMEFLDFRNLEILILDEADRLLDMGF 177
Query: 223 VEDVELILGKVKNVGQVQTLLFSATLPDWVKQIAAKFLKRDKKTADLVGNTKMKASTSVR 282
+ V I+ ++ Q +T LFSAT + + ADL A +R
Sbjct: 178 QKQVNYIISRLPK--QRRTGLFSAT--------------QTQAVADL-------AKAGLR 214
Query: 283 HIVLPCTSSARS-QLIPDIIRCYSSGGRTIIFTETKESASQLSQLL---PGARAL----- 333
+ L C + +S QL+ +I + + ++F T ++ P +++
Sbjct: 215 NPYLKCEADQKSSQLVHLLIE--NKNKKLVVFFMTCACVDYWGLVISKIPSLKSISFFPT 272
Query: 334 HGDIQQAQREVTLSGFRSGKFMTLVATNVAARGLDI 369
HG + Q R+ L+ F L+ T+VAARGLDI
Sbjct: 273 HGKMDQKGRDTALASFTEASSGVLLCTDVAARGLDI 308
>AT4G34910.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr4:16631661-16634834
FORWARD LENGTH=626
Length = 626
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 99/392 (25%), Positives = 169/392 (43%), Gaps = 52/392 (13%)
Query: 52 PNAVSKFRISGPLREMLKEKGIVSLFPIQAMTFDTVLDGSDLVGRARTGQGKTLAFVLPI 111
P + + + L L +KGI IQ +L+G D+V RA+TG GKTLA++LP+
Sbjct: 45 PKSFEELGLDSRLIRALTKKGIEKPTLIQQSAIPYILEGKDVVARAKTGSGKTLAYLLPL 104
Query: 112 LESLTNGPTKASRKTGYGRPPSVIVLLPTRELACQVHADFE--VYGGAMGLTSCCLYGGA 169
L+ L + + + +K PS +L+P+REL QV+ + + + L + L
Sbjct: 105 LQKLFSADSVSKKKLA----PSAFILVPSRELCQQVYTEVSSLIELCRVQLKAVQLTSSM 160
Query: 170 PYQGQEMKLKRGVDVVIGTPGRIKDHIERGNIDLS----QLKFRVLDEADEMLRMGFVED 225
L ++++ TP I G ++ + L VLDEAD +L G+ ++
Sbjct: 161 SASDMRNALAGLPEILVSTPACIPKCFAAGVLEPTAVSESLSILVLDEADLLLSYGYEDN 220
Query: 226 VELILGKVKNVGQVQTLLFSATLPDWVKQIAAKFLKRDKKTADLVGNTKMKA-STSVRHI 284
+ + + + Q LL SAT V+++ L N K +A ++V+
Sbjct: 221 LRSVTSIIPR--RCQCLLMSATTSSDVEKLKKLILHNPIVLTLTEDNDKEEAVPSNVQQF 278
Query: 285 VLPCTSSARSQLIPDIIRCYSSGGRTIIFTETKESASQLSQLLP--GARA--LHGDIQQA 340
+ C++ + I +++ + +IF T + +L L G ++ L+G++ Q
Sbjct: 279 WISCSAQDKLLHILALLKLEVVQKKILIFINTIDMGFRLKLFLEKFGIKSAILNGELPQN 338
Query: 341 QREVTLSGFRSGKFMTLVATNVAA-----------------------------------R 365
R L F +G F L+AT+ + R
Sbjct: 339 SRLHILEQFNAGLFDYLIATDDNSQTKKQKEEAKGEANKENKKNNKRSKPKLDAEFGVVR 398
Query: 366 GLDINDVQLIIQCEPPRDVEAYIHRSGRTGRA 397
G+D V +I + P+ V YIHR GRTGRA
Sbjct: 399 GIDFKKVHTVINFDMPQSVTGYIHRIGRTGRA 430
>AT5G19210.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:6461444-6463687
FORWARD LENGTH=472
Length = 472
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 90/359 (25%), Positives = 154/359 (42%), Gaps = 45/359 (12%)
Query: 68 LKEKGIVSLFPIQAMTFDTVLDGSDLVGRARTGQGKTLAFVLPILESLTNGPTKASRKTG 127
++E G V IQ T+ G D + A+TG GKTL ++L I SL N P ++S +
Sbjct: 91 MEEIGFVFPTDIQREALPTLFTGRDCILHAQTGSGKTLTYLLLIF-SLIN-PQRSSVQA- 147
Query: 128 YGRPPSVIVLLPTRELACQVHADFEVYGG-----AMGLTSCCLYGGAPYQGQEMKLK-RG 181
++++PTREL QV + G T L G + + LK
Sbjct: 148 -------VIVVPTRELGMQVTKVARMLAAKSEIDVKGCTVMALLDGGTLRRHKSWLKAEP 200
Query: 182 VDVVIGTPGRIKDHIERGNIDLSQLKFRVLDEADEMLRMGF-VEDVELILGKVKNVGQVQ 240
+++ T + +E+ + ++ V+DE D + V V +L + + Q
Sbjct: 201 PAILVATVASLCHMLEKHIFRIDSVRVLVVDEVDFLFYSSKQVGSVRKLLTSFSSCDKRQ 260
Query: 241 TLLFSATLP-------DWVKQIAAKFLKRDKKTADLVGNTKMKASTSVRHIVLPCTSSAR 293
T+ SA++P D ++Q K+ KRD + + M + H + C + +
Sbjct: 261 TVFASASIPQHKHFVHDCIQQ---KWTKRD--VVHVHVSAIMPMPLCLLHRFVMCEKTNK 315
Query: 294 SQLIPDIIRCYSSGGRTIIFTETKE---------SASQLSQLLPGARA-------LHGDI 337
Q++ ++ + I E E S + L + L + L GD+
Sbjct: 316 HQVLLALLESDAPESAIIFVGEQSEKSKKAGNDPSTTLLMEFLKTSYKGSLEILLLEGDM 375
Query: 338 QQAQREVTLSGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGR 396
R +L+ R G LV+T++AARG+D+ + I + P+ V Y+HR+GR GR
Sbjct: 376 NFNSRAASLTEIRQGGGFLLVSTDIAARGIDLPETTHIFNFDLPQTVTDYLHRAGRAGR 434
>AT5G11200.2 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3567389-3570686 FORWARD LENGTH=486
Length = 486
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 87/175 (49%), Gaps = 15/175 (8%)
Query: 90 GSDLVGRARTGQGKTLAFVLPILESLTNGPTKASRKTGYGRPPSVIVLLPTRELACQVHA 149
G D++ +A++G GKT FVL L+ + P + S +VL TRELA Q+
Sbjct: 83 GMDVICQAKSGMGKTAVFVLSTLQQIEPSPGQVS----------ALVLCHTRELAYQICN 132
Query: 150 DFEVYGGAMGLTSC-CLYGGAPYQGQEMKLKRGV-DVVIGTPGRIKDHIERGNIDLSQLK 207
+F + + T YGG + + LK +V+GTPGR+ ++ L ++
Sbjct: 133 EFVRFSTYLPDTKVSVFYGGVNIKIHKDLLKNECPHIVVGTPGRVLALAREKDLSLKNVR 192
Query: 208 FRVLDEADEMLR-MGFVEDVELILGKVKNVGQVQTLLFSATLPDWVKQIAAKFLK 261
+LDE D+ML + DV+ I + QV ++FSATL ++ + KF++
Sbjct: 193 HFILDECDKMLESLDMRRDVQEIFKMTPHDKQV--MMFSATLSKEIRPVCKKFMQ 245
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 54/101 (53%), Gaps = 4/101 (3%)
Query: 308 GRTIIFTETKESASQLSQLLPGAR----ALHGDIQQAQREVTLSGFRSGKFMTLVATNVA 363
+ +IF ++ A++L++LL +H + Q +R F+ G LVAT++
Sbjct: 348 NQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKSFKEGHKRILVATDLV 407
Query: 364 ARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAV 404
RG+DI V ++I + P + Y+HR GR GR G G+A+
Sbjct: 408 GRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAI 448
>AT5G19210.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:6462100-6463687
FORWARD LENGTH=315
Length = 315
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 102/237 (43%), Gaps = 29/237 (12%)
Query: 184 VVIGTPGRIKDHIERGNIDLSQLKFRVLDEADEMLRMGF-VEDVELILGKVKNVGQVQTL 242
+++ T + +E+ + ++ V+DE D + V V +L + + QT+
Sbjct: 46 ILVATVASLCHMLEKHIFRIDSVRVLVVDEVDFLFYSSKQVGSVRKLLTSFSSCDKRQTV 105
Query: 243 LFSATLP-------DWVKQIAAKFLKRDKKTADLVGNTKMKASTSVRHIVLPCTSSARSQ 295
SA++P D ++Q K+ KRD + + M + H + C + + Q
Sbjct: 106 FASASIPQHKHFVHDCIQQ---KWTKRD--VVHVHVSAIMPMPLCLLHRFVMCEKTNKHQ 160
Query: 296 LIPDIIRCYSSGGRTIIFTETKE---------SASQLSQLLPGARA-------LHGDIQQ 339
++ ++ + I E E S + L + L + L GD+
Sbjct: 161 VLLALLESDAPESAIIFVGEQSEKSKKAGNDPSTTLLMEFLKTSYKGSLEILLLEGDMNF 220
Query: 340 AQREVTLSGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGR 396
R +L+ R G LV+T++AARG+D+ + I + P+ V Y+HR+GR GR
Sbjct: 221 NSRAASLTEIRQGGGFLLVSTDIAARGIDLPETTHIFNFDLPQTVTDYLHRAGRAGR 277
>AT1G59990.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:22090369-22092885 REVERSE LENGTH=581
Length = 581
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 84/177 (47%), Gaps = 12/177 (6%)
Query: 240 QTLLFSATLPDWVKQIAAKFLKRDKKTADLV-GNTKMKASTSVRHIVLPCTSSARSQLIP 298
Q + +ATLP K+ A LK + A V GN + S ++ + T ++ +
Sbjct: 354 QYIFIAATLPVNGKKTAGGILKHMFQDAVWVSGNFLHRNSPRLKQKWVEVTVDSQVDALI 413
Query: 299 DIIRCYSSGG--RTIIFTETKESASQLSQLLPGARA----LHGDIQQAQREVTLSGFRS- 351
+ ++ ++ RT++F T E+ ++ +L A H + + +R L+ FR
Sbjct: 414 EAVKNNNNTNTERTMVFANTVEAVEAVADILEKASIQCYRYHKNHKLDERANILADFRET 473
Query: 352 -GKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLY 407
G F V T+ AARG+D+ +V +IQ + ++HR GRT RAG G LY
Sbjct: 474 GGVF---VCTDAAARGVDVPNVSHVIQADFASSAVDFLHRIGRTARAGQYGTVTSLY 527