Miyakogusa Predicted Gene

Lj1g3v4657800.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4657800.1 Non Chatacterized Hit- tr|G7IUS7|G7IUS7_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,41.44,6e-19,ATS3,Embryo-specific 3; seg,NULL;
Lipase/lipooxygenase domain (PLAT/LH2
domain),Lipase/lipooxygenase,
NODE_50470_length_852_cov_128.366196.path1.1
         (189 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G62200.1 | Symbols:  | Embryo-specific protein 3, (ATS3) | ch...   205   1e-53
AT2G41475.1 | Symbols:  | Embryo-specific protein 3, (ATS3) | ch...   174   4e-44
AT5G62210.1 | Symbols:  | Embryo-specific protein 3, (ATS3) | ch...   136   9e-33
AT5G07190.1 | Symbols: ATS3 | seed gene 3 | chr5:2237610-2238488...   115   1e-26
AT5G07190.2 | Symbols: ATS3 | seed gene 3 | chr5:2237783-2238488...   109   8e-25

>AT5G62200.1 | Symbols:  | Embryo-specific protein 3, (ATS3) |
           chr5:24984463-24985674 REVERSE LENGTH=190
          Length = 190

 Score =  205 bits (522), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 98/156 (62%), Positives = 120/156 (76%), Gaps = 2/156 (1%)

Query: 32  PHAAESFNISYIQLKNAGSCSYMVYISTSCSSPRYTRDQISIAFGDAYGNQIYAPRLDDP 91
           PH AESFN+S IQ K   +C+Y V ISTSCSS RYTRDQIS+AFGD YGNQIYAPRLDDP
Sbjct: 30  PHVAESFNVSLIQ-KLGNTCAYTVIISTSCSSTRYTRDQISVAFGDGYGNQIYAPRLDDP 88

Query: 92  NSGTFESCSSDTFQIYGPCAYQICYVYLYRSGFDGWKPESVKINGYNGRPVTFYYNTFIP 151
           ++ TFE CSSDTFQI GPC YQICYVYLYRSG DGW P +VKI  +  + VTF YNT++P
Sbjct: 89  STKTFEQCSSDTFQINGPCTYQICYVYLYRSGPDGWIPNTVKIYSHGSKAVTFPYNTYVP 148

Query: 152 RDTWYGFNLCNAAASSHQVTVQ-KWLICIVLGVLLS 186
              WYGFN CN+A+ S+ + +  +  + I+LG +++
Sbjct: 149 ESVWYGFNYCNSASDSNVLAIGLRRSVIILLGFVVA 184


>AT2G41475.1 | Symbols:  | Embryo-specific protein 3, (ATS3) |
           chr2:17295259-17296329 REVERSE LENGTH=179
          Length = 179

 Score =  174 bits (440), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 81/138 (58%), Positives = 100/138 (72%), Gaps = 1/138 (0%)

Query: 32  PHAAESFNISYIQLKNAGSCSYMVYISTSCSSPRYTRDQISIAFGDAYGNQIYAPRLDDP 91
           P   +SF I   +L+NA +CSY V I TSCSS  YTRD+ISI+FGD YGN++Y  RLDDP
Sbjct: 30  PLPIDSF-IPKPKLENAAACSYTVIIKTSCSSVSYTRDKISISFGDVYGNEVYVKRLDDP 88

Query: 92  NSGTFESCSSDTFQIYGPCAYQICYVYLYRSGFDGWKPESVKINGYNGRPVTFYYNTFIP 151
           +S TFE CSSDT++I GPC   +CY+YL R G DGWKPE+VKI G + R VTFYYN F+P
Sbjct: 89  SSRTFEKCSSDTYKISGPCMRDVCYLYLLRQGSDGWKPENVKIYGSSIRSVTFYYNLFLP 148

Query: 152 RDTWYGFNLCNAAASSHQ 169
              WYGFN+CN   ++  
Sbjct: 149 NSVWYGFNVCNGIGNTKS 166


>AT5G62210.1 | Symbols:  | Embryo-specific protein 3, (ATS3) |
           chr5:24986521-24987477 REVERSE LENGTH=223
          Length = 223

 Score =  136 bits (342), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 66/125 (52%), Positives = 82/125 (65%), Gaps = 2/125 (1%)

Query: 40  ISYIQLKNAGSCSYMVYISTSCSSPRYTRDQISIAFGDAYGNQIYAPRLDDPNSGT--FE 97
           IS + L    SC Y V ++TSC SP ++RDQ++IA GDA  NQ+ APRLD P SG   FE
Sbjct: 29  ISSLDLHEEESCPYTVIVTTSCFSPDWSRDQVTIALGDADDNQVVAPRLDKPLSGGGGFE 88

Query: 98  SCSSDTFQIYGPCAYQICYVYLYRSGFDGWKPESVKINGYNGRPVTFYYNTFIPRDTWYG 157
            CSSDTFQ+ G C   IC VY+YRSG DGW PE+V+I     + V F +N  +P + WYG
Sbjct: 89  KCSSDTFQVKGKCLNTICSVYIYRSGTDGWIPETVEIYKEGSKSVKFDFNKNVPENIWYG 148

Query: 158 FNLCN 162
            N CN
Sbjct: 149 NNYCN 153


>AT5G07190.1 | Symbols: ATS3 | seed gene 3 | chr5:2237610-2238488
           FORWARD LENGTH=213
          Length = 213

 Score =  115 bits (289), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 60/136 (44%), Positives = 84/136 (61%), Gaps = 5/136 (3%)

Query: 34  AAESFNISYIQLKNAGSCSYMVYISTSCSSPRYTRDQISIAFGDAYGNQIYAPRLDD--P 91
              +F++S IQ++  G+C Y V + TSC SP  TRDQISI FGDA GN++YAP+L     
Sbjct: 18  VTHAFDLSIIQMQQ-GTCPYTVVVMTSCLSPESTRDQISIVFGDADGNKVYAPKLGGLVR 76

Query: 92  NSGTFESCSSDTFQIYGPCAYQ-ICYVYLYRSGFDGWKPESVKINGYNGRPVTFYYNTFI 150
             G    CS++TFQ+ G C    IC +Y+ R+G DGW PES++I     + V F ++  +
Sbjct: 77  GPGGLGKCSTNTFQVRGQCLNDPICSLYINRNGPDGWVPESIEIYSEGSKSVKFDFSKSV 136

Query: 151 PR-DTWYGFNLCNAAA 165
           P+ +TWYG N CN   
Sbjct: 137 PQLNTWYGHNNCNTTG 152


>AT5G07190.2 | Symbols: ATS3 | seed gene 3 | chr5:2237783-2238488
           FORWARD LENGTH=185
          Length = 185

 Score =  109 bits (273), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 56/121 (46%), Positives = 75/121 (61%), Gaps = 4/121 (3%)

Query: 49  GSCSYMVYISTSCSSPRYTRDQISIAFGDAYGNQIYAPRLDD--PNSGTFESCSSDTFQI 106
           G+C Y V + TSC SP  TRDQISI FGDA GN++YAP+L       G    CS++TFQ+
Sbjct: 4   GTCPYTVVVMTSCLSPESTRDQISIVFGDADGNKVYAPKLGGLVRGPGGLGKCSTNTFQV 63

Query: 107 YGPCAYQ-ICYVYLYRSGFDGWKPESVKINGYNGRPVTFYYNTFIPR-DTWYGFNLCNAA 164
            G C    IC +Y+ R+G DGW PES++I     + V F ++  +P+ +TWYG N CN  
Sbjct: 64  RGQCLNDPICSLYINRNGPDGWVPESIEIYSEGSKSVKFDFSKSVPQLNTWYGHNNCNTT 123

Query: 165 A 165
            
Sbjct: 124 G 124