Miyakogusa Predicted Gene

Lj1g3v4626580.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4626580.1 Non Chatacterized Hit- tr|H9G9F6|H9G9F6_ANOCA
Uncharacterized protein (Fragment) OS=Anolis
carolinen,50.55,2e-19,Beige/BEACH domain,BEACH domain; BEACH,BEACH
domain; no description,BEACH domain; Beach,BEACH domain,CUFF.32826.1
         (122 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G45540.2 | Symbols:  | WD-40 repeat family protein / beige-re...   154   2e-38
AT2G45540.1 | Symbols:  | WD-40 repeat family protein / beige-re...   154   2e-38
AT1G58230.1 | Symbols:  | binding | chr1:21566331-21578865 FORWA...    85   1e-17
AT1G03060.1 | Symbols: SPI | Beige/BEACH domain ;WD domain, G-be...    75   1e-14
AT4G02660.1 | Symbols:  | Beige/BEACH domain ;WD domain, G-beta ...    74   2e-14
AT5G18525.1 | Symbols:  | protein serine/threonine kinases;prote...    46   7e-06

>AT2G45540.2 | Symbols:  | WD-40 repeat family protein / beige-related
            | chr2:18757881-18772229 REVERSE LENGTH=3001
          Length = 3001

 Score =  154 bits (388), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 72/91 (79%), Positives = 76/91 (83%), Gaps = 4/91 (4%)

Query: 1    MFSDISGTWNGVLEDMSDVREL----FYLPEVLTNENSIDFGTAQLGGKLDTVRLLAWAE 56
            MFSD  GTWNGVLEDMSDV+EL    FYLPEVLTNENSIDFGT QLG KLD V+L  WA+
Sbjct: 2414 MFSDFPGTWNGVLEDMSDVKELVPELFYLPEVLTNENSIDFGTTQLGEKLDAVKLPPWAK 2473

Query: 57   NPVDFVHTHRMVLESEYVSAHLHEWIDLIFG 87
            NPVDFVH  R  LESE+VSAHLHEWIDLIFG
Sbjct: 2474 NPVDFVHKQRRALESEHVSAHLHEWIDLIFG 2504


>AT2G45540.1 | Symbols:  | WD-40 repeat family protein / beige-related
            | chr2:18757881-18772229 REVERSE LENGTH=2946
          Length = 2946

 Score =  154 bits (388), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 72/91 (79%), Positives = 76/91 (83%), Gaps = 4/91 (4%)

Query: 1    MFSDISGTWNGVLEDMSDVREL----FYLPEVLTNENSIDFGTAQLGGKLDTVRLLAWAE 56
            MFSD  GTWNGVLEDMSDV+EL    FYLPEVLTNENSIDFGT QLG KLD V+L  WA+
Sbjct: 2359 MFSDFPGTWNGVLEDMSDVKELVPELFYLPEVLTNENSIDFGTTQLGEKLDAVKLPPWAK 2418

Query: 57   NPVDFVHTHRMVLESEYVSAHLHEWIDLIFG 87
            NPVDFVH  R  LESE+VSAHLHEWIDLIFG
Sbjct: 2419 NPVDFVHKQRRALESEHVSAHLHEWIDLIFG 2449


>AT1G58230.1 | Symbols:  | binding | chr1:21566331-21578865 FORWARD
            LENGTH=2604
          Length = 2604

 Score = 85.1 bits (209), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 44/92 (47%), Positives = 57/92 (61%), Gaps = 5/92 (5%)

Query: 1    MFSDISGTWNGVLEDMSDVREL----FYLPEVLTNENSIDFGTAQLGGKLDTVRLLAWAE 56
            +F  + G++   L + SDV+EL    FY+PE L N NS   G  Q G  L  V L  WA+
Sbjct: 2075 LFQSVEGSFRNCLSNTSDVKELIPEFFYMPEFLVNSNSYHLGVKQDGEPLGEVCLPPWAK 2134

Query: 57   -NPVDFVHTHRMVLESEYVSAHLHEWIDLIFG 87
             +P  F+  +R  LESEYVS+HLH+WIDLIFG
Sbjct: 2135 GSPEMFIARNREALESEYVSSHLHDWIDLIFG 2166


>AT1G03060.1 | Symbols: SPI | Beige/BEACH domain ;WD domain, G-beta
            repeat protein | chr1:712971-726891 REVERSE LENGTH=3601
          Length = 3601

 Score = 74.7 bits (182), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 44/94 (46%), Positives = 55/94 (58%), Gaps = 7/94 (7%)

Query: 1    MFSDISGTWNGVLE--DMSDVREL----FYLPEVLTNENSIDFGTAQLGGKLDTVRLLAW 54
            +F+ I  TW       + SDV+EL    FY+PE L N  S+D G  Q G K+  V L  W
Sbjct: 3091 LFNSIKDTWLSAAGKGNTSDVKELIPEFFYMPEFLENRFSLDLGEKQSGEKVGDVFLPPW 3150

Query: 55   AENPV-DFVHTHRMVLESEYVSAHLHEWIDLIFG 87
            A   V +F+  HR  LES+YVS +LH WIDLIFG
Sbjct: 3151 ARGSVREFILKHREALESDYVSENLHHWIDLIFG 3184


>AT4G02660.1 | Symbols:  | Beige/BEACH domain ;WD domain, G-beta
            repeat protein | chr4:1159927-1173791 REVERSE LENGTH=3527
          Length = 3527

 Score = 74.3 bits (181), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 43/94 (45%), Positives = 55/94 (58%), Gaps = 7/94 (7%)

Query: 1    MFSDISGTWNGVLE--DMSDVREL----FYLPEVLTNENSIDFGTAQLGGKLDTVRLLAW 54
            +F+ I  TW       + SDV+EL    FY+PE L N  ++D G  Q G K+  V L  W
Sbjct: 3035 LFNSIRETWLSAAGKGNTSDVKELIPEFFYMPEFLENRFNLDLGEKQSGDKVGDVILPPW 3094

Query: 55   AENPV-DFVHTHRMVLESEYVSAHLHEWIDLIFG 87
            A   V +F+  HR  LES+YVS +LH WIDLIFG
Sbjct: 3095 ARGSVREFIRKHREALESDYVSENLHHWIDLIFG 3128


>AT5G18525.1 | Symbols:  | protein serine/threonine kinases;protein
           tyrosine kinases;ATP binding;protein kinases |
           chr5:6146932-6153658 REVERSE LENGTH=1639
          Length = 1639

 Score = 45.8 bits (107), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 18/40 (45%), Positives = 25/40 (62%)

Query: 54  WAENPVDFVHTHRMVLESEYVSAHLHEWIDLIFGASKGTH 93
           WA +P +F+  HR  LES +VS+ +H WID+ FG     H
Sbjct: 507 WASSPDEFIRLHRDALESPHVSSLIHHWIDITFGYKMSGH 546