Miyakogusa Predicted Gene

Lj1g3v4594340.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4594340.1 Non Chatacterized Hit- tr|I1JPQ7|I1JPQ7_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.49302
PE,81.48,7e-19,seg,NULL,67795_g.1
         (54 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G36870.1 | Symbols: XTH32 | xyloglucan endotransglucosylase/h...    48   1e-06
AT2G36870.2 | Symbols: XTH32 | xyloglucan endotransglucosylase/h...    48   1e-06

>AT2G36870.1 | Symbols: XTH32 | xyloglucan
          endotransglucosylase/hydrolase 32 |
          chr2:15472869-15474630 REVERSE LENGTH=299
          Length = 299

 Score = 48.1 bits (113), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 20/24 (83%), Positives = 23/24 (95%)

Query: 31 KVRSLSFHKGFRNLWGPQHQRLDQ 54
          KV SL+F+KGFRNLWGPQHQR+DQ
Sbjct: 37 KVGSLNFYKGFRNLWGPQHQRMDQ 60


>AT2G36870.2 | Symbols: XTH32 | xyloglucan
          endotransglucosylase/hydrolase 32 |
          chr2:15473911-15474630 REVERSE LENGTH=178
          Length = 178

 Score = 48.1 bits (113), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 20/24 (83%), Positives = 23/24 (95%)

Query: 31 KVRSLSFHKGFRNLWGPQHQRLDQ 54
          KV SL+F+KGFRNLWGPQHQR+DQ
Sbjct: 37 KVGSLNFYKGFRNLWGPQHQRMDQ 60