Miyakogusa Predicted Gene

Lj1g3v4594300.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4594300.1 gene.g36948.t1.1
         (259 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G03430.1 | Symbols:  | phosphoadenosine phosphosulfate (PAPS)...   367   e-102

>AT5G03430.1 | Symbols:  | phosphoadenosine phosphosulfate (PAPS)
           reductase family protein | chr5:849237-852867 REVERSE
           LENGTH=497
          Length = 497

 Score =  367 bits (943), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 189/273 (69%), Positives = 214/273 (78%), Gaps = 31/273 (11%)

Query: 8   YGLQIDTIRLDFKSGLEALLKEMPIRAIFLGVRIGDPTAVGQEQFSPSSPGWPPFMRVNP 67
           Y LQ+D IR DFKSGLEALLK  PIRAIFLGVRIGDPTAVGQEQFSPSSPGWPPFMRVNP
Sbjct: 103 YNLQLDIIRQDFKSGLEALLKANPIRAIFLGVRIGDPTAVGQEQFSPSSPGWPPFMRVNP 162

Query: 68  ILDWSYS--------------------YTSIGSIYDTVPNSLLCISNSSNK--FKPAYLL 105
           ILDWSY                     YTSIGSI+DTVPNSLL ++++S+K  FKPAYLL
Sbjct: 163 ILDWSYRDVWAFLLTCKVKYCSLYDQGYTSIGSIHDTVPNSLLSVNDTSSKEKFKPAYLL 222

Query: 106 ADGRLERAGRVKKLSSSTCGQLPVDSNGLTSLDMHKNSVLTASIIGVGDEILFGIVEDQL 165
           +DGRLERAGRVKK++S    +  VD+      +  K+ VL AS+I VGDEIL G VEDQL
Sbjct: 223 SDGRLERAGRVKKIASL---KKDVDT------ESQKHEVLLASVIAVGDEILSGTVEDQL 273

Query: 166 GPYVCRKLHSVGWSVLQLSVAHNNIDSVAEEVERQKSTTDMVFIYGGVGPLHSDVTLAGI 225
           G  +C+KL SVGWSV Q +V  N+IDSV+EEV+RQ+ST+DMVFIYGGVGPLHSDVTLAG+
Sbjct: 274 GLSLCKKLTSVGWSVQQTTVLRNDIDSVSEEVDRQRSTSDMVFIYGGVGPLHSDVTLAGV 333

Query: 226 AKAFGVRLAPDEEFEEYLRQTIGDQSTGDRNEV 258
           AKAFGVRLAPDEEFEEYLR  I DQ TGDRNE+
Sbjct: 334 AKAFGVRLAPDEEFEEYLRHLISDQCTGDRNEM 366