Miyakogusa Predicted Gene

Lj1g3v4591200.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4591200.1 Non Chatacterized Hit- tr|I1JPP8|I1JPP8_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.12154 PE,90.3,0,hisS:
histidine--tRNA ligase,Histidine-tRNA ligase; Class II aaRS and biotin
synthetases,NULL; Class,NODE_3595_length_1479_cov_86.826912.path2.1
         (489 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G46100.1 | Symbols: ATHRS1, HRS1 | Histidyl-tRNA synthetase 1...   630   0.0  
AT5G03406.1 | Symbols:  | Class II aaRS and biotin synthetases s...   340   1e-93
AT3G02760.1 | Symbols:  | Class II aaRS and biotin synthetases s...   117   2e-26

>AT3G46100.1 | Symbols: ATHRS1, HRS1 | Histidyl-tRNA synthetase 1 |
           chr3:16928444-16930984 REVERSE LENGTH=486
          Length = 486

 Score =  630 bits (1624), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 308/435 (70%), Positives = 350/435 (80%), Gaps = 1/435 (0%)

Query: 56  GGRTGALTPGPSVPRDV-QKIDVNPPKGTRDFPPEDMRLRNWLFNHFKEVSRLYGFEEVD 114
           GGR+G++        D  +KIDVNPPKGTRDFPPEDMRLRNWLFNHFKEVSRLYG+EEVD
Sbjct: 47  GGRSGSIVAPLVTEEDFHKKIDVNPPKGTRDFPPEDMRLRNWLFNHFKEVSRLYGYEEVD 106

Query: 115 FPVLESEALYTRKAGEEIKDQLYCFEDRGNRRVALRPELTPSLARLVIQKGKSVSLPLKW 174
           +PVLE+EAL+ RKAGEEI+DQLYCFEDRGNRRVALRPELTPSLARLVIQKGKSVSLPLKW
Sbjct: 107 YPVLETEALFIRKAGEEIRDQLYCFEDRGNRRVALRPELTPSLARLVIQKGKSVSLPLKW 166

Query: 175 FTVGQCWXXXXXXXXXXXEHYQWNMDIIGVPGVMAEAELISSIVTLFKRIGITESDVGFK 234
           F +GQCW           EHYQWNMDIIGVP V AEAELISSIVT FKRIGIT SDVGFK
Sbjct: 167 FAIGQCWRYERMTRGRRREHYQWNMDIIGVPQVTAEAELISSIVTFFKRIGITASDVGFK 226

Query: 235 VSSRKVLQEVLRCYSIPENLFGKVCXXXXXXXXXXXXXXXXXLKAAGLSQEAVLELLQVL 294
           VSSRKVLQE+L+ Y +PE+LFG+VC                 L   G+S++A+ +LLQVL
Sbjct: 227 VSSRKVLQELLKKYGVPEDLFGRVCIIIDKIEKIPIDEIKKELGFTGISEDAIEQLLQVL 286

Query: 295 SVKSLTELEERLGNSGEAIADLKELFSLAEKFGYSKWLQFDASVVRGLAYYTGIVFEGFD 354
           SVKSL +LE+ +G +GEAIADLK+LFSLAEKFGYS+W+QFDASVVRGLAYYTGIVFEGFD
Sbjct: 287 SVKSLDDLEDIIGGAGEAIADLKQLFSLAEKFGYSEWIQFDASVVRGLAYYTGIVFEGFD 346

Query: 355 RQGKLRAICGGGRYDHLFSTFGADDVAACGFGFGDAXXXXXXXXXXXXXXXSMQIDDIVC 414
           R+GKLRAICGGGRYD L ST+G DD  ACGFGFGDA                 ++++IVC
Sbjct: 347 RKGKLRAICGGGRYDRLLSTYGGDDFPACGFGFGDAVIVELLKEKDLLPELGQEVENIVC 406

Query: 415 ALDEDLQGYAALVANILREKGQSVDLVLESKPLKWVFKRAARTNAERLVLVGNSEWQKGV 474
           ALD+DLQG AA VA  LR+KGQ+VDLVLESKPLKWVFKRAAR NA RLVLVG +EW+ G 
Sbjct: 407 ALDKDLQGAAATVATALRDKGQTVDLVLESKPLKWVFKRAARVNARRLVLVGKTEWEDGS 466

Query: 475 VGVKILSTGEQYEVK 489
           V VK+LS+GEQ++VK
Sbjct: 467 VSVKVLSSGEQFQVK 481


>AT5G03406.1 | Symbols:  | Class II aaRS and biotin synthetases
           superfamily protein | chr5:839966-841444 FORWARD
           LENGTH=263
          Length = 263

 Score =  340 bits (872), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 161/204 (78%), Positives = 175/204 (85%)

Query: 56  GGRTGALTPGPSVPRDVQKIDVNPPKGTRDFPPEDMRLRNWLFNHFKEVSRLYGFEEVDF 115
           GGR+G++     V  + Q IDVNPPKGTRDFPPEDMRLRNWLFNHFKEVSRL+G+EEVDF
Sbjct: 48  GGRSGSIVAPLVVNEEFQNIDVNPPKGTRDFPPEDMRLRNWLFNHFKEVSRLFGYEEVDF 107

Query: 116 PVLESEALYTRKAGEEIKDQLYCFEDRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWF 175
           PVLE+EAL+ RKAGEEI+DQLYCFEDRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWF
Sbjct: 108 PVLETEALFIRKAGEEIRDQLYCFEDRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWF 167

Query: 176 TVGQCWXXXXXXXXXXXEHYQWNMDIIGVPGVMAEAELISSIVTLFKRIGITESDVGFKV 235
            VGQCW           EHYQWNMDIIGVP V AEAELISSI+T FKRIGIT SDVGFKV
Sbjct: 168 AVGQCWRYERMTRGRRREHYQWNMDIIGVPEVTAEAELISSIMTFFKRIGITASDVGFKV 227

Query: 236 SSRKVLQEVLRCYSIPENLFGKVC 259
           SSRKVLQE L+ Y +PE+LFG+VC
Sbjct: 228 SSRKVLQEFLKKYGVPEDLFGRVC 251


>AT3G02760.1 | Symbols:  | Class II aaRS and biotin synthetases
           superfamily protein | chr3:597588-600650 REVERSE
           LENGTH=883
          Length = 883

 Score =  117 bits (292), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 115/425 (27%), Positives = 180/425 (42%), Gaps = 29/425 (6%)

Query: 80  PKGTRDFPPEDMRLRNWLFNHFKEVSRLYGFEEVDFPVLESEALYTRKAGEEIKDQLYCF 139
           PKGTRDF  E M +R   F+  + V + +G   +D PV E       K GE+ K  +Y  
Sbjct: 449 PKGTRDFAKEQMAVREKAFSIIQNVFKRHGATALDTPVFELRETLMGKYGEDSK-LVYDI 507

Query: 140 EDRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFTVGQCWXXXXXXXXXXXEHYQWNM 199
            D+G    +LR +LT   AR V   G +     K + + + +           E YQ + 
Sbjct: 508 ADQGGELCSLRYDLTVPFARYVAMNGIT---SFKRYQIAKVYRRDNPSKGRYREFYQCDF 564

Query: 200 DIIGVPGVMA-EAELISSIVTLFKRIGITESDVGFKVSSRKVLQEVLRCYSIPENLFGKV 258
           DI G+   M  + E++  +  L   + I + +V  K++ RK+L  +L    +P   F  +
Sbjct: 565 DIAGLFEPMGPDFEIVKILTELLDELEIGDYEV--KLNHRKLLDGMLEICGVPPEKFRTI 622

Query: 259 CXXXXXXXXXXXXXXXXXL-KAAGLSQE-------------AVLELLQVLSVKSLTELEE 304
           C                 + +  GLS E             A LELL  L  +    L+ 
Sbjct: 623 CSSIDKLDKQSFEQVKKEMVEEKGLSSEIADRIGNFVKEKGAPLELLSKLRQEGSEFLDN 682

Query: 305 RLGNSGEAIADLKELFSLAEKFGYSKWLQFDASVVRGLAYYTGIVFEGFDRQGKLRAICG 364
           +  +S EA+ +L  +F   ++   S+ + FD S+ RGL YYTG++FE      ++ +I  
Sbjct: 683 Q--SSREALDELSIMFEALKRSKCSERIVFDLSLARGLDYYTGVIFEAVCIGAEVGSIGA 740

Query: 365 GGRYDHLFSTFGADDVAACGFGFGDAXXXXXXXXXXXXXXXSMQIDD----IVCALDEDL 420
           GGRYD+L   FG   V A G   G                  ++  +    +   +D  L
Sbjct: 741 GGRYDNLIGMFGTKQVPAVGMSLGIERVFNIMEELNEKQKQVIRPTETQVLVSIMVDNKL 800

Query: 421 QGYAALVANILREKGQSVDLVLESKPLKWVFKRAARTNAERLVLVGNSEWQKGVVGVKIL 480
              A LV+ +   K  +  LV  SK  +  F RA  +    +V+VG  E     V +K L
Sbjct: 801 AEAAELVSQLWGAKINAEYLV--SKRKEKHFNRAKESGIPWMVMVGEKELSGSFVTLKKL 858

Query: 481 STGEQ 485
             G +
Sbjct: 859 EKGSE 863