Miyakogusa Predicted Gene

Lj1g3v4590980.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4590980.1 Non Chatacterized Hit- tr|I3SZY3|I3SZY3_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,97.94,0,coiled-coil,NULL; TRANSLIN,NULL; TRANSLIN AND TRANSLIN
ASSOCIATED PROTEIN X,Translin; no description,CUFF.32783.1
         (298 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G37020.1 | Symbols:  | Translin family protein | chr2:1554651...   358   3e-99
AT2G37020.2 | Symbols:  | Translin family protein | chr2:1554651...   353   7e-98
AT2G03780.1 | Symbols:  | Translin family protein | chr2:1152716...    53   3e-07

>AT2G37020.1 | Symbols:  | Translin family protein |
           chr2:15546514-15548792 FORWARD LENGTH=308
          Length = 308

 Score =  358 bits (918), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 174/243 (71%), Positives = 198/243 (81%), Gaps = 7/243 (2%)

Query: 56  MAGVDGSLSAAPPSPTQSLEKQFDVFKAQLEESGTLRERIRHVVSEIESTTRVMYASLLL 115
           MAG DG +S        SLEKQF+ F+ QLEES  LRE+IR VV EIES TR++ A+LLL
Sbjct: 71  MAGGDGQVS-------HSLEKQFESFRVQLEESAALREQIRAVVMEIESATRLIQANLLL 123

Query: 116 VHQSRPTPELLEKAKSQIDVLKEKYNQLAEILGEHPGQYYRYHGDWRSETQTVVSLLTLM 175
           VHQSRP PE++EKAK +I  LK+ Y +LAEIL E PGQYYRYHGDWRSETQ VVS L  M
Sbjct: 124 VHQSRPIPEVIEKAKEKIVDLKQYYGRLAEILEECPGQYYRYHGDWRSETQAVVSQLAFM 183

Query: 176 HWLETGSLLEHNDAQEKLGLNGPEFSLDIEDYLVGVCFMSNELPRYVVNQVTAGDYDCPR 235
           HWLETG+LL H +A+EKLGLN  EF L+ EDYL G+CFMSN+LPRYVVN+VTAGDYDCPR
Sbjct: 184 HWLETGTLLVHTEAEEKLGLNSLEFGLETEDYLTGICFMSNDLPRYVVNRVTAGDYDCPR 243

Query: 236 KVLKFLTDLHAAFRMLNLRNDFLRKKFDGMKYDLRKVEEVYYDVKIRGLSSNGESVGDQG 295
           KV+ FLTDLHAAFRMLNLRNDFLRKKFD MKYDLR+VEEVYYDVKIRGL S G+  G Q 
Sbjct: 244 KVMNFLTDLHAAFRMLNLRNDFLRKKFDSMKYDLRRVEEVYYDVKIRGLISGGDPPGVQA 303

Query: 296 IEG 298
           ++G
Sbjct: 304 VQG 306


>AT2G37020.2 | Symbols:  | Translin family protein |
           chr2:15546511-15548792 FORWARD LENGTH=310
          Length = 310

 Score =  353 bits (906), Expect = 7e-98,   Method: Compositional matrix adjust.
 Identities = 174/244 (71%), Positives = 198/244 (81%), Gaps = 8/244 (3%)

Query: 56  MAGVDGSLSAAPPSPTQSLEKQFDVFKAQLEESGTLRERIRHVVSEIESTTRVMYASLLL 115
           MAG DG +S        SLEKQF+ F+ QLEES  LRE+IR VV EIES TR++ A+LLL
Sbjct: 72  MAGGDGQVS-------HSLEKQFESFRVQLEESAALREQIRAVVMEIESATRLIQANLLL 124

Query: 116 VHQSRPTPELLEKAKSQIDVLKEKYNQLAEILGEHPGQYYRYHGDWRSETQTVVSLLTLM 175
           VHQSRP PE++EKAK +I  LK+ Y +LAEIL E PGQYYRYHGDWRSETQ VVS L  M
Sbjct: 125 VHQSRPIPEVIEKAKEKIVDLKQYYGRLAEILEECPGQYYRYHGDWRSETQAVVSQLAFM 184

Query: 176 HWLETGSLLEHNDAQEKLGLNGPEFSLDIEDYLVGVCFMSNEL-PRYVVNQVTAGDYDCP 234
           HWLETG+LL H +A+EKLGLN  EF L+ EDYL G+CFMSN+L PRYVVN+VTAGDYDCP
Sbjct: 185 HWLETGTLLVHTEAEEKLGLNSLEFGLETEDYLTGICFMSNDLQPRYVVNRVTAGDYDCP 244

Query: 235 RKVLKFLTDLHAAFRMLNLRNDFLRKKFDGMKYDLRKVEEVYYDVKIRGLSSNGESVGDQ 294
           RKV+ FLTDLHAAFRMLNLRNDFLRKKFD MKYDLR+VEEVYYDVKIRGL S G+  G Q
Sbjct: 245 RKVMNFLTDLHAAFRMLNLRNDFLRKKFDSMKYDLRRVEEVYYDVKIRGLISGGDPPGVQ 304

Query: 295 GIEG 298
            ++G
Sbjct: 305 AVQG 308


>AT2G03780.1 | Symbols:  | Translin family protein |
           chr2:1152716-1154285 REVERSE LENGTH=287
          Length = 287

 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 49/238 (20%), Positives = 114/238 (47%), Gaps = 14/238 (5%)

Query: 57  AGVDGSLSAAPPSPTQS-LEKQFDVFKAQLEESGTLRERIRHVVSEIE-STTRVMYASLL 114
           +GV+  +  A    T+S ++  F  +   L      RER+  V  +I  ++ +V++    
Sbjct: 32  SGVEHLVKKARTMSTESSMKDAFSTYADYLNNFNEKRERVVKVSRDITMNSKKVIFQVHR 91

Query: 115 LVHQSRPTPELLEKAKSQIDVLKEKYNQLAEILGEHPG-QYYRYHGDWRSETQTVVSLLT 173
           L   ++   E+LEKA   ++ +++++   A ++ E  G  +++    +    Q  V   T
Sbjct: 92  LSKDNKE--EVLEKAGKDLEAVRDQH--FARLMKELQGTDFWKLRRAYSPGVQEYVEAAT 147

Query: 174 LMHWLETGSLLEHNDAQEKL-GLNGPEF---SLDIEDYLVGVCFMSNELPRYVVNQVTAG 229
              +  +G+L   ++    L  L+ P      ++I DY++G+  ++ EL R  + +++ G
Sbjct: 148 FYKFCLSGTLCTLDEINTTLVPLSDPSLEPLQINILDYILGLADLTGELMRMAIGRISDG 207

Query: 230 DYDCPRKVLKFLTDLHAAFRMLNLRNDF---LRKKFDGMKYDLRKVEEVYYDVKIRGL 284
           + +  +++ +F+  +H    ++  + D    ++ K + M   + K+E   + V +RGL
Sbjct: 208 EIEFAQRICQFVRQIHRELMLVVPKMDDSYDMKSKMEVMLQSVIKIENACFSVHVRGL 265