Miyakogusa Predicted Gene

Lj1g3v4590910.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4590910.1 Non Chatacterized Hit- tr|H9W5N9|H9W5N9_PINTA
Uncharacterized protein (Fragment) OS=Pinus taeda
GN=0,33.1,0.00000000000001,coiled-coil,NULL; seg,NULL,CUFF.32781.1
         (463 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G37035.1 | Symbols:  | unknown protein; Has 26 Blast hits to ...   352   3e-97

>AT2G37035.1 | Symbols:  | unknown protein; Has 26 Blast hits to 26
           proteins in 11 species: Archae - 0; Bacteria - 0;
           Metazoa - 2; Fungi - 0; Plants - 23; Viruses - 0; Other
           Eukaryotes - 1 (source: NCBI BLink). |
           chr2:15555374-15556780 REVERSE LENGTH=433
          Length = 433

 Score =  352 bits (904), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 186/340 (54%), Positives = 225/340 (66%), Gaps = 41/340 (12%)

Query: 130 KPPLNATLLALGPFR----FSDPVADDGVRVSGVVRPGTTFKA-EGLD-GDNHXXXXXXX 183
           + P+NAT + L  F     FS P+ D+G+ +  ++R G   +  E  D G +        
Sbjct: 129 RSPINATTVFLSGFESISGFSRPIIDNGLLLPQIIRSGVVLRQLEKEDHGGDEDETELDE 188

Query: 184 XXXMKNGLGNGQEMEKGVDLRFFVKGLEVGHRDAAALFFLVSFLSAAYGWVILVFLVTYS 243
               +      ++ E  VDL+   KGLE+G  DAAALFFLVSFLSAAYGWVIL F   YS
Sbjct: 189 SELDRESEKKDKDFESFVDLKMIFKGLELGRSDAAALFFLVSFLSAAYGWVILGFTTVYS 248

Query: 244 WVLGVVFVAVVNDLVGRFSSVTGLVWDGSRLGLKRLSGFILMRWAVRDALTQLLGLWYFG 303
            VL ++FV V+NDL+GRF S  G+VW GSRLG KR++GF+LMRWAVRDALTQLLGLWYFG
Sbjct: 249 LVLAIMFVTVINDLLGRFPSFLGVVWRGSRLGFKRVTGFVLMRWAVRDALTQLLGLWYFG 308

Query: 304 EIEDQYSFFKLFVRLKLMPFSVMSPWVRGFEKEISGFLFTWFLVDTFVAFIFAVDAWVAI 363
           E+EDQYSFF+LFVRLKLMPF+VM PW+RGFEKEISGFLF WFL+DT V  I AVDA+VAI
Sbjct: 309 EVEDQYSFFRLFVRLKLMPFTVMPPWIRGFEKEISGFLFAWFLLDTLVGLILAVDAFVAI 368

Query: 364 VDSRRSGREIVKEGCYLISTMFNQAIQIKCLEAVLCGSFVRWGLSRICGRTFAKMFQSTM 423
           VDSRR GREIVKE                                   G++FA + QS +
Sbjct: 369 VDSRRRGREIVKE-----------------------------------GKSFASVIQSAL 393

Query: 424 EVYFMVTWLVFYFAARCRDANLQGRRFGQRELEGLIDGHR 463
           EVYFM  WLVFY AA+C+DA+  GRRFG+RE+E LIDG R
Sbjct: 394 EVYFMAAWLVFYLAAKCKDAHADGRRFGRREMESLIDGLR 433