Miyakogusa Predicted Gene

Lj1g3v4590880.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4590880.1 CUFF.32772.1
         (255 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G13280.1 | Symbols: AOC4 | allene oxide cyclase 4 | chr1:4547...   229   2e-60
AT3G25780.1 | Symbols: AOC3 | allene oxide cyclase 3 | chr3:9409...   226   8e-60
AT3G25760.1 | Symbols: AOC1, ERD12 | allene oxide cyclase 1 | ch...   223   1e-58
AT3G25770.1 | Symbols: AOC2 | allene oxide cyclase 2 | chr3:9406...   221   3e-58

>AT1G13280.1 | Symbols: AOC4 | allene oxide cyclase 4 |
           chr1:4547624-4548552 FORWARD LENGTH=254
          Length = 254

 Score =  229 bits (583), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 114/186 (61%), Positives = 134/186 (72%), Gaps = 2/186 (1%)

Query: 72  SQQAAESSETERVQELSVYEFNERDRGSPAYLRLGFKPVN-SLGDLVPFSNKLYTADLQK 130
           S  + + S   ++QEL+VYEFNE DR SPA L+LG KP    LGDLVPF+NKLYT DL K
Sbjct: 69  SSSSNDYSRPTKIQELNVYEFNEGDRNSPAVLKLGKKPDQLCLGDLVPFTNKLYTGDLTK 128

Query: 131 RIGITAGICILIEHKPEKNGDRYEAVYSFYFGDYGHLTVQGPYLTYEDTWLSVTGGAGIF 190
           RIGITAG+C+LI+H PEK GDR+EA YSFYFGDYGH++VQGPYLTYEDT+L++TGG+G+F
Sbjct: 129 RIGITAGLCVLIQHVPEKKGDRFEASYSFYFGDYGHISVQGPYLTYEDTFLAITGGSGVF 188

Query: 191 EGARGQVKLNQIVYPFKILYTFYLKGV-KDLPQELLXXXXXXXXXXXXXXXXXXXXXXXT 249
           EGA GQVKL Q+VYP K+ YTFYLKGV  DLP EL                        T
Sbjct: 189 EGAYGQVKLRQLVYPTKLFYTFYLKGVAADLPVELTGKHVEPSKEVKPAAEAQATQPGAT 248

Query: 250 IAGFTN 255
           IA FTN
Sbjct: 249 IANFTN 254


>AT3G25780.1 | Symbols: AOC3 | allene oxide cyclase 3 |
           chr3:9409362-9410409 FORWARD LENGTH=258
          Length = 258

 Score =  226 bits (577), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 108/161 (67%), Positives = 131/161 (81%), Gaps = 2/161 (1%)

Query: 66  KSFSCRSQQAAESSETERVQELSVYEFNERDRGSPAYLRLGFKPVN-SLGDLVPFSNKLY 124
           ++F     +  E+S   ++QEL+VYE NE DR SPA L+LG KP    LGDLVPF+NKLY
Sbjct: 67  RAFFWNWGKKTENSRPSKIQELNVYELNEGDRNSPAVLKLGKKPTELCLGDLVPFTNKLY 126

Query: 125 TADLQKRIGITAGICILIEHKPEKNGDRYEAVYSFYFGDYGHLTVQGPYLTYEDTWLSVT 184
           T DL+KR+GITAG+C+LI+H PEK+GDR+EA YSFYFGDYGHL+VQG YLTYEDT+L+VT
Sbjct: 127 TGDLKKRVGITAGLCVLIQHVPEKSGDRFEASYSFYFGDYGHLSVQGQYLTYEDTFLAVT 186

Query: 185 GGAGIFEGARGQVKLNQIVYPFKILYTFYLKGV-KDLPQEL 224
           GG+GIFEGA GQVKL Q+VYP K+ YTFYLKG+  DLP EL
Sbjct: 187 GGSGIFEGAYGQVKLRQLVYPTKLFYTFYLKGLANDLPLEL 227


>AT3G25760.1 | Symbols: AOC1, ERD12 | allene oxide cyclase 1 |
           chr3:9403972-9405105 FORWARD LENGTH=254
          Length = 254

 Score =  223 bits (567), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 104/150 (69%), Positives = 124/150 (82%), Gaps = 1/150 (0%)

Query: 77  ESSETERVQELSVYEFNERDRGSPAYLRLGFKPVNSLGDLVPFSNKLYTADLQKRIGITA 136
           E+    +VQELSVYE N+ DR SP  L+  F     LGDLVPF+NKLYT DL+KR+GITA
Sbjct: 75  ENPRPSKVQELSVYEINDLDRHSPKILKNAFSFRFGLGDLVPFTNKLYTGDLKKRVGITA 134

Query: 137 GICILIEHKPEKNGDRYEAVYSFYFGDYGHLTVQGPYLTYEDTWLSVTGGAGIFEGARGQ 196
           G+C++IEH PEKNGDR+EA YSFYFGDYGHL+VQGPYLTYED++L++TGGAGIFEGA GQ
Sbjct: 135 GLCVVIEHVPEKNGDRFEATYSFYFGDYGHLSVQGPYLTYEDSFLAITGGAGIFEGAYGQ 194

Query: 197 VKLNQIVYPFKILYTFYLKGV-KDLPQELL 225
           VKL Q+VYP K+ YTFYLKG+  DLP EL+
Sbjct: 195 VKLQQLVYPTKLFYTFYLKGLANDLPLELI 224


>AT3G25770.1 | Symbols: AOC2 | allene oxide cyclase 2 |
           chr3:9406975-9407839 FORWARD LENGTH=253
          Length = 253

 Score =  221 bits (564), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 103/149 (69%), Positives = 123/149 (82%), Gaps = 1/149 (0%)

Query: 77  ESSETERVQELSVYEFNERDRGSPAYLRLGFKPVNSLGDLVPFSNKLYTADLQKRIGITA 136
           E+    +VQELSVYE NE DR SP  L+  F  +  LGDLVPF+NKLYT DL+KR+GITA
Sbjct: 74  ENPRPSKVQELSVYEINELDRHSPKILKNAFSLMFGLGDLVPFTNKLYTGDLKKRVGITA 133

Query: 137 GICILIEHKPEKNGDRYEAVYSFYFGDYGHLTVQGPYLTYEDTWLSVTGGAGIFEGARGQ 196
           G+C++IEH PEK G+R+EA YSFYFGDYGHL+VQGPYLTYED++L++TGGAGIFEGA GQ
Sbjct: 134 GLCVVIEHVPEKKGERFEATYSFYFGDYGHLSVQGPYLTYEDSFLAITGGAGIFEGAYGQ 193

Query: 197 VKLNQIVYPFKILYTFYLKGV-KDLPQEL 224
           VKL Q+VYP K+ YTFYLKG+  DLP EL
Sbjct: 194 VKLQQLVYPTKLFYTFYLKGLANDLPLEL 222