Miyakogusa Predicted Gene
- Lj1g3v4590860.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v4590860.2 Non Chatacterized Hit- tr|I1JPN1|I1JPN1_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.42766
PE,61.12,0,ZF_PHD_1,Zinc finger, PHD-type, conserved site; PHD zinc
finger,Zinc finger, PHD-type; Chromatin org,CUFF.32809.2
(1648 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G08060.2 | Symbols: MOM, MOM1 | ATP-dependent helicase family... 260 7e-69
AT1G08060.1 | Symbols: MOM, MOM1 | ATP-dependent helicase family... 260 7e-69
AT5G44800.1 | Symbols: CHR4, PKR1 | chromatin remodeling 4 | chr... 239 1e-62
AT2G25170.1 | Symbols: PKL, GYM, CHD3, CHR6, SSL2 | chromatin re... 204 4e-52
AT2G13370.1 | Symbols: CHR5 | chromatin remodeling 5 | chr2:5544... 191 4e-48
AT4G31900.1 | Symbols: PKR2 | chromatin remodeling factor, putat... 172 3e-42
AT4G31900.2 | Symbols: PKR2 | chromatin remodeling factor, putat... 158 3e-38
AT5G19310.1 | Symbols: | Homeotic gene regulator | chr5:6498906... 135 2e-31
AT3G06010.1 | Symbols: ATCHR12 | Homeotic gene regulator | chr3:... 129 1e-29
AT2G44980.1 | Symbols: | SNF2 domain-containing protein / helic... 124 5e-28
AT2G28290.3 | Symbols: SYD, CHR3 | P-loop containing nucleoside ... 117 7e-26
AT2G28290.1 | Symbols: SYD, CHR3 | P-loop containing nucleoside ... 117 7e-26
AT2G28290.2 | Symbols: SYD, CHR3 | P-loop containing nucleoside ... 117 7e-26
AT3G06400.3 | Symbols: CHR11 | chromatin-remodeling protein 11 |... 115 2e-25
AT3G06400.1 | Symbols: CHR11 | chromatin-remodeling protein 11 |... 115 2e-25
AT3G06400.2 | Symbols: CHR11 | chromatin-remodeling protein 11 |... 115 2e-25
AT5G18620.2 | Symbols: CHR17 | chromatin remodeling factor17 | c... 114 4e-25
AT5G18620.1 | Symbols: CHR17 | chromatin remodeling factor17 | c... 114 5e-25
AT2G44980.2 | Symbols: | SNF2 domain-containing protein / helic... 114 9e-25
AT5G66750.1 | Symbols: DDM1, CHR01, CHR1, CHA1, SOM4, SOM1, ATDD... 104 6e-22
AT2G18760.1 | Symbols: CHR8 | chromatin remodeling 8 | chr2:8129... 79 2e-14
AT3G57300.1 | Symbols: INO80, ATINO80 | INO80 ortholog | chr3:21... 75 3e-13
AT2G46020.1 | Symbols: CHR2, ATBRM, BRM, CHA2 | transcription re... 73 1e-12
AT2G46020.2 | Symbols: CHR2, ATBRM, BRM, CHA2 | transcription re... 73 1e-12
AT3G19210.2 | Symbols: RAD54 | homolog of RAD54 | chr3:6652799-6... 72 3e-12
AT3G57300.2 | Symbols: INO80 | INO80 ortholog | chr3:21199612-21... 71 7e-12
AT3G19210.1 | Symbols: ATRAD54, CHR25, RAD54 | homolog of RAD54 ... 71 9e-12
AT3G12810.1 | Symbols: PIE1, SRCAP, chr13 | SNF2 domain-containi... 60 1e-08
AT2G02090.1 | Symbols: CHR19, CHA19, ETL1 | SNF2 domain-containi... 58 6e-08
AT1G03750.1 | Symbols: CHR9 | switch 2 | chr1:937920-941068 FORW... 54 1e-06
>AT1G08060.2 | Symbols: MOM, MOM1 | ATP-dependent helicase family
protein | chr1:2501981-2510488 REVERSE LENGTH=2001
Length = 2001
Score = 260 bits (664), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 152/411 (36%), Positives = 229/411 (55%), Gaps = 15/411 (3%)
Query: 494 STRFVEHWVPAQLSNLQLEQYCXXXXXXXXXXXXXXXXDTVDALRDLIISTRKCCNHPYL 553
S+ + E+WVP QLS++QLEQYC D + AL + + S RK C+HPY+
Sbjct: 474 SSVYPEYWVPVQLSDVQLEQYCQTLFSKSLSLSSLSKID-LGALEETLNSVRKTCDHPYV 532
Query: 554 LDPSLHNFVTRGRPVEEHLNIGIKASGKLQLLERILFEARRRGLRVLIIFQSSDGSGS-- 611
+D SL +T+ + E L++ IKASGKL LL+++L ++ GL+ ++ +Q++
Sbjct: 533 MDASLKQLLTKNLELHEILDVEIKASGKLHLLDKMLTHIKKNGLKAVVFYQATQTPEGLL 592
Query: 612 IGNILDDVLCQRFGQDCYVRYDRGYIKSKKQAALDTFNDKESGKFVFLMEIRDCLPSVKL 671
+GNIL+D + QRFG Y+ G SKK +A++ FN KES V L+E R C ++KL
Sbjct: 593 LGNILEDFVGQRFGPK---SYEHGIYSSKKNSAINNFN-KESQCCVLLLETRACSQTIKL 648
Query: 672 SSVDTVILFDSDWDPQNDLRCLQKMSVSSQFSQLTVFRLYSYFTVEEKVLMLAKEGIRLT 731
D ILF S +P +D++ ++K+ + S + +FRLYS TVEEK L+LA++ R
Sbjct: 649 LRADAFILFGSSLNPSHDVKHVEKIKIESCSERTKIFRLYSVCTVEEKALILARQNKRQ- 707
Query: 732 VDNNMQLINQSICHALLKWGASYLFDKLDYLHGGEFSVSAPDICSDQSLLSDIICELSPN 791
+ ++ +N+S+ HALL WGASYLFDKLD+ H E S + +QS++ +I E S
Sbjct: 708 -NKAVENLNRSLTHALLMWGASYLFDKLDHFHSSETPDSG--VSFEQSIMDGVIHEFSSI 764
Query: 792 LVYGGGEPGDNTDCNGWSFISRVQKNGGEYARNILLLGEREIKKLGNEPHTSSWSDLLKA 851
L GGE + C + + G Y+ + L GE IK E WS LL
Sbjct: 765 LSSKGGEENEVKLC----LLLEAKHAQGTYSSDSTLFGEDHIKLSDEESPNIFWSKLLGG 820
Query: 852 RRPQWKLLSVSSQRIRKTVKHFDRIIKESECENDAVVRKRRKVSIDYVDPK 902
+ P WK S + QR RK V++F+ + + +KR+K S D DP+
Sbjct: 821 KNPMWKYPSDTPQRNRKRVQYFEGSEASPKTGDGGNAKKRKKASDDVTDPR 871
Score = 63.5 bits (153), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 97/209 (46%), Gaps = 13/209 (6%)
Query: 947 ANKTRKVSKDIIDAKRREMSKDINVNRRGLSKD-VANSKSRKVTKNVFNSKYLKAYNRAR 1005
A K +K S D+ D + + D + R+ KD + +S KV L++ ++
Sbjct: 857 AKKRKKASDDVTDPRVTDPPVDDD-ERKASGKDHMGALESPKVI-------TLQSSCKSS 908
Query: 1006 KLNGIRNGFSKVLDSTVHPLTSEITGAAAMNMQFSKQKKLPD-MPKSTELLPKPDISELC 1064
+G +G ++ + S I+G + K+PD + + KP +++LC
Sbjct: 909 GTDGTLDGNDAF---GLYSMGSHISGIPEDMLASQDWGKIPDESQRRLHTVLKPKMAKLC 965
Query: 1065 DVLHFPKNVKAVATRVLEHIFEHYNISCLEVSTAQAFEISVCWLAASLLKHKIDRKDSLH 1124
VLH ++ LE++ E++ I +T QAF+I++ W+AA L+K + K+SL
Sbjct: 966 QVLHLSDACTSMVGNFLEYVIENHRIYEEPATTFQAFQIALSWIAALLVKQILSHKESLV 1025
Query: 1125 LAKQLLNFDCKEDEASDVYSELSKHKKDF 1153
A L F C E +YS LS K F
Sbjct: 1026 RANSELAFKCSRVEVDYIYSILSCMKSLF 1054
>AT1G08060.1 | Symbols: MOM, MOM1 | ATP-dependent helicase family
protein | chr1:2501981-2510488 REVERSE LENGTH=2001
Length = 2001
Score = 260 bits (664), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 152/411 (36%), Positives = 229/411 (55%), Gaps = 15/411 (3%)
Query: 494 STRFVEHWVPAQLSNLQLEQYCXXXXXXXXXXXXXXXXDTVDALRDLIISTRKCCNHPYL 553
S+ + E+WVP QLS++QLEQYC D + AL + + S RK C+HPY+
Sbjct: 474 SSVYPEYWVPVQLSDVQLEQYCQTLFSKSLSLSSLSKID-LGALEETLNSVRKTCDHPYV 532
Query: 554 LDPSLHNFVTRGRPVEEHLNIGIKASGKLQLLERILFEARRRGLRVLIIFQSSDGSGS-- 611
+D SL +T+ + E L++ IKASGKL LL+++L ++ GL+ ++ +Q++
Sbjct: 533 MDASLKQLLTKNLELHEILDVEIKASGKLHLLDKMLTHIKKNGLKAVVFYQATQTPEGLL 592
Query: 612 IGNILDDVLCQRFGQDCYVRYDRGYIKSKKQAALDTFNDKESGKFVFLMEIRDCLPSVKL 671
+GNIL+D + QRFG Y+ G SKK +A++ FN KES V L+E R C ++KL
Sbjct: 593 LGNILEDFVGQRFGPK---SYEHGIYSSKKNSAINNFN-KESQCCVLLLETRACSQTIKL 648
Query: 672 SSVDTVILFDSDWDPQNDLRCLQKMSVSSQFSQLTVFRLYSYFTVEEKVLMLAKEGIRLT 731
D ILF S +P +D++ ++K+ + S + +FRLYS TVEEK L+LA++ R
Sbjct: 649 LRADAFILFGSSLNPSHDVKHVEKIKIESCSERTKIFRLYSVCTVEEKALILARQNKRQ- 707
Query: 732 VDNNMQLINQSICHALLKWGASYLFDKLDYLHGGEFSVSAPDICSDQSLLSDIICELSPN 791
+ ++ +N+S+ HALL WGASYLFDKLD+ H E S + +QS++ +I E S
Sbjct: 708 -NKAVENLNRSLTHALLMWGASYLFDKLDHFHSSETPDSG--VSFEQSIMDGVIHEFSSI 764
Query: 792 LVYGGGEPGDNTDCNGWSFISRVQKNGGEYARNILLLGEREIKKLGNEPHTSSWSDLLKA 851
L GGE + C + + G Y+ + L GE IK E WS LL
Sbjct: 765 LSSKGGEENEVKLC----LLLEAKHAQGTYSSDSTLFGEDHIKLSDEESPNIFWSKLLGG 820
Query: 852 RRPQWKLLSVSSQRIRKTVKHFDRIIKESECENDAVVRKRRKVSIDYVDPK 902
+ P WK S + QR RK V++F+ + + +KR+K S D DP+
Sbjct: 821 KNPMWKYPSDTPQRNRKRVQYFEGSEASPKTGDGGNAKKRKKASDDVTDPR 871
Score = 63.5 bits (153), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 97/209 (46%), Gaps = 13/209 (6%)
Query: 947 ANKTRKVSKDIIDAKRREMSKDINVNRRGLSKD-VANSKSRKVTKNVFNSKYLKAYNRAR 1005
A K +K S D+ D + + D + R+ KD + +S KV L++ ++
Sbjct: 857 AKKRKKASDDVTDPRVTDPPVDDD-ERKASGKDHMGALESPKVI-------TLQSSCKSS 908
Query: 1006 KLNGIRNGFSKVLDSTVHPLTSEITGAAAMNMQFSKQKKLPD-MPKSTELLPKPDISELC 1064
+G +G ++ + S I+G + K+PD + + KP +++LC
Sbjct: 909 GTDGTLDGNDAF---GLYSMGSHISGIPEDMLASQDWGKIPDESQRRLHTVLKPKMAKLC 965
Query: 1065 DVLHFPKNVKAVATRVLEHIFEHYNISCLEVSTAQAFEISVCWLAASLLKHKIDRKDSLH 1124
VLH ++ LE++ E++ I +T QAF+I++ W+AA L+K + K+SL
Sbjct: 966 QVLHLSDACTSMVGNFLEYVIENHRIYEEPATTFQAFQIALSWIAALLVKQILSHKESLV 1025
Query: 1125 LAKQLLNFDCKEDEASDVYSELSKHKKDF 1153
A L F C E +YS LS K F
Sbjct: 1026 RANSELAFKCSRVEVDYIYSILSCMKSLF 1054
>AT5G44800.1 | Symbols: CHR4, PKR1 | chromatin remodeling 4 |
chr5:18083659-18092162 REVERSE LENGTH=2223
Length = 2223
Score = 239 bits (609), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 183/666 (27%), Positives = 309/666 (46%), Gaps = 63/666 (9%)
Query: 120 NEVTQTEYFVKYKGLAHAHNCWIPEIQMLLEAQKLLAKFKRKLQVVSW---RRHWSKPQR 176
E E+ VK+ ++ HN WI E ++ A++ L +K K W +PQR
Sbjct: 546 GETVSYEFLVKWVDKSNIHNTWISEAELKGLAKRKLENYKAKYGTAVINICEDKWKQPQR 605
Query: 177 LLLKRAIVLPKQNDQHFDAHKHNGKDLAYRYEWLVKWTGLGYEQVTWE-LDDASFMTSSE 235
++ A+ + K+ +Q E VKWTGL Y++ TWE L++ SS
Sbjct: 606 IV---ALRVSKEGNQ----------------EAYVKWTGLAYDECTWESLEEPILKHSSH 646
Query: 236 GIKLIDDYECRLKRADRLSNPFEAKERKASLAELSVPASGDLPGLYNQHLSYVTKLHMCW 295
I L YE + + NP + +L E G L+ L + L CW
Sbjct: 647 LIDLFHQYEQKTLERNSKGNPTRERGEVVTLTEQPQELRGG--ALFAHQLEALNWLRRCW 704
Query: 296 HKGQNALILEDQIDQERVMKVILFILSL--NHNVKRPFLIITTSSGLTVWETEFLHLAPS 353
HK +N +IL D++ + + F+ SL V RP L++ S + W +EF AP
Sbjct: 705 HKSKN-VILADEMGLGKTVSASAFLSSLYFEFGVARPCLVLVPLSTMPNWLSEFSLWAPL 763
Query: 354 ANLVVYKGNKDVRSCIRALEFY--NEDG------GILFQILLSSSDIIVEDLHELRCISW 405
N+V Y G+ R+ IR E++ N G F +LL++ ++++ D LR + W
Sbjct: 764 LNVVEYHGSAKGRAIIRDYEWHAKNSTGTTKKPTSYKFNVLLTTYEMVLADSSHLRGVPW 823
Query: 406 EAIIIDECQRSKSLSH--IDYIRTLAAEMRLLLVSGQIKEDRADYIKLLSFLKSGHHRLN 463
E +++DE R K+ + T + + R+LL ++ + + LL+FL+
Sbjct: 824 EVLVVDEGHRLKNSESKLFSLLNTFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPSSFPSL 883
Query: 464 IAQMETYFSASISNLKSQLKQYVA----YKCNSGSTRFV----EHWVPAQLSNLQLEQYC 515
+ E + + + +LK+ VA + + + + E VP +L+++Q E Y
Sbjct: 884 SSFEERFHDLTSAEKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELTSIQAEYYR 943
Query: 516 XXXXXXXXXXXXXXXXDTVDALRDLIISTRKCCNHPYLLDPSLHNFVTRGRPVEEHLNIG 575
++ ++++ RK CNHPYL+ P +E ++
Sbjct: 944 AMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLI-PGTE---PESGSLEFLHDMR 999
Query: 576 IKASGKLQLLERILFEARRRGLRVLIIFQSSDGSGSIGNILDDVLCQRFGQDCYVRYDRG 635
IKAS KL LL +L + G RVLI Q + + +IL+D L FG + R D
Sbjct: 1000 IKASAKLTLLHSMLKVLHKEGHRVLIFSQMT----KLLDILEDYLNIEFGPKTFERVDGS 1055
Query: 636 YIKSKKQAALDTFNDKESGKFVFLMEIRDCLPSVKLSSVDTVILFDSDWDPQNDLRCLQK 695
+ +QAA+ FN ++ +FVFL+ R C + L++ DTVI++DSD++P D++ + +
Sbjct: 1056 VAVADRQAAIARFN-QDKNRFVFLLSTRACGLGINLATADTVIIYDSDFNPHADIQAMNR 1114
Query: 696 MSVSSQFSQLTVFRLYSYFTVEEKVLMLAKEGIRLTVDNNMQLINQSICHA----LLKWG 751
Q +L V+RL +VEE++L LAK+ + L + +N+S +L+WG
Sbjct: 1115 AHRIGQSKRLLVYRLVVRASVEERILQLAKKKLML----DQLFVNKSGSQKEFEDILRWG 1170
Query: 752 ASYLFD 757
LF+
Sbjct: 1171 TEELFN 1176
>AT2G25170.1 | Symbols: PKL, GYM, CHD3, CHR6, SSL2 | chromatin
remodeling factor CHD3 (PICKLE) | chr2:10714411-10723763
FORWARD LENGTH=1384
Length = 1384
Score = 204 bits (519), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 206/825 (24%), Positives = 349/825 (42%), Gaps = 125/825 (15%)
Query: 28 KDNAQEDTDVNDKHGDSEPLCCKCSRGGMLMRCCGKRCQRSYHPSCVDPPFNYVPPGFWY 87
KD E + + E C C L+ C C ++H C+ PP W
Sbjct: 32 KDRTFEQVEAIVRTDAKENACQACGESTNLVSC--NTCTYAFHAKCLVPPLKDASVENWR 89
Query: 88 CIQCVEKKIKFGVHSVSVGVESIFD--------TREVVSDNE---VTQTEYFVKYKGLAH 136
C +CV S ++ I D + + SD E + +Y VK+KGL++
Sbjct: 90 CPECV---------SPLNEIDKILDCEMRPTKSSEQGSSDAEPKPIFVKQYLVKWKGLSY 140
Query: 137 AHNCWIPE--IQMLLEAQKLLA----KFKRKLQ--------VVSWRRHWSKPQRLLLKRA 182
H W+PE Q ++ L F R+++ V+ R W+ R+L R
Sbjct: 141 LHCSWVPEKEFQKAYKSNHRLKTRVNNFHRQMESFNNSEDDFVAIRPEWTTVDRILACR- 199
Query: 183 IVLPKQNDQHFDAHKHNGKDLAYRYEWLVKWTGLGYEQVTWEL--DDASFMTSSEGIKLI 240
+ +G+ E+LVK+ L Y++ WE D ++F + K +
Sbjct: 200 --------------EEDGE-----LEYLVKYKELSYDECYWESESDISTFQNEIQRFKDV 240
Query: 241 DDYECRLKRADRLSNP--FEAKERKASLAELSVPASGDLPGLYNQH-LSYVTKLHMCWHK 297
+ R K D NP F+ + L GL + + L + L W K
Sbjct: 241 NSRTRRSKDVDHKRNPRDFQQFDHTPEF----------LKGLLHPYQLEGLNFLRFSWSK 290
Query: 298 GQNALILEDQIDQERVMKVILFILSLNHNVKRPFLIITTSSGLTVWETEFLHLAPSANLV 357
Q +IL D++ + ++ I + SL P L+I S L WE EF AP N+V
Sbjct: 291 -QTHVILADEMGLGKTIQSIALLASLFEENLIPHLVIAPLSTLRNWEREFATWAPQMNVV 349
Query: 358 VYKGNKDVRSCIRALEFY-------------------NEDGGILFQILLSSSDIIVEDLH 398
+Y G R+ IR EFY ++ I F +LL+S ++I D
Sbjct: 350 MYFGTAQARAVIREHEFYLSKDQKKIKKKKSGQISSESKQKRIKFDVLLTSYEMINLDSA 409
Query: 399 ELRCISWEAIIIDECQR--SKSLSHIDYIRTLAAEMRLLLVSGQIKEDRADYIKLLSFLK 456
L+ I WE +I+DE R +K + ++ R+LL ++ + + L+ FL
Sbjct: 410 VLKPIKWECMIVDEGHRLKNKDSKLFSSLTQYSSNHRILLTGTPLQNNLDELFMLMHFLD 469
Query: 457 SGHHRLNIAQMETYFS-----ASISNLKSQLKQYVAYKCNSGSTRFV----EHWVPAQLS 507
+G ++ + + F IS L L ++ + + + E + LS
Sbjct: 470 AGKFG-SLEEFQEEFKDINQEEQISRLHKMLAPHLLRRVKKDVMKDMPPKKELILRVDLS 528
Query: 508 NLQLEQYCXXXXXXXXXXXXXXXXDTVDALRDLIISTRKCCNHPYLLD---PSLHNFVTR 564
+LQ E Y +L ++++ RK C HPY+L+ P +H+
Sbjct: 529 SLQKEYYKAIFTRNYQVLTKKGGAQI--SLNNIMMELRKVCCHPYMLEGVEPVIHD---- 582
Query: 565 GRPVEEHLNIGIKASGKLQLLERILFEARRRGLRVLIIFQSSDGSGSIGNILDDVLCQRF 624
E +++ GKLQLL++++ + + +G RVLI Q + ++L+D +
Sbjct: 583 ---ANEAFKQLLESCGKLQLLDKMMVKLKEQGHRVLIYTQFQ----HMLDLLEDYCTHKK 635
Query: 625 GQDCYVRYDRGYIKSKKQAALDTFNDKESGKFVFLMEIRDCLPSVKLSSVDTVILFDSDW 684
Q Y R D +++Q +D FN K S KF FL+ R + L++ DTVI++DSDW
Sbjct: 636 WQ--YERIDGKVGGAERQIRIDRFNAKNSNKFCFLLSTRAGGLGINLATADTVIIYDSDW 693
Query: 685 DPQNDLRCLQKMSVSSQFSQLTVFRLYSYFTVEEKVLMLAKEGI---RLTVDN-NMQLIN 740
+P DL+ + + Q +++ ++RL + T+EE+++ L K+ + L V Q IN
Sbjct: 694 NPHADLQAMARAHRLGQTNKVMIYRLINRGTIEERMMQLTKKKMVLEHLVVGKLKTQNIN 753
Query: 741 QSICHALLKWGASYLFDKLDYLHGGEFSVSAPDICSDQSLLSDII 785
Q ++++G+ LF D G + D D+ L D++
Sbjct: 754 QEELDDIIRYGSKELFASEDDEAGKSGKIHYDDAAIDKLLDRDLV 798
>AT2G13370.1 | Symbols: CHR5 | chromatin remodeling 5 |
chr2:5544601-5555543 REVERSE LENGTH=1724
Length = 1724
Score = 191 bits (484), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 183/721 (25%), Positives = 331/721 (45%), Gaps = 70/721 (9%)
Query: 85 FWYCIQCVEKKIKFGVHS-VSVGVESIFDTREVVSDNEVTQTEYFVKYKGLAHAHNCW-- 141
W+ ++ + + ++ S V V V +FDT + + + E+ +K+KG +H H W
Sbjct: 426 LWHQLKGMGEDVQTNNKSTVPVLVSQLFDT-----EPDWNEMEFLIKWKGQSHLHCQWKT 480
Query: 142 IPEIQMLLEAQKLLAKFKRKLQVVSWRRHWSKPQ----RLLLKRAIVLPKQNDQ--HFDA 195
+ ++Q L +K+L K+ + + +R S+ + + + + + KQN Q A
Sbjct: 481 LSDLQNLSGFKKVLNYTKKVTEEIRYRTALSREEIEVNDVSKEMDLDIIKQNSQVERIIA 540
Query: 196 HKHNGKDLA-YRYEWLVKWTGLGYEQVTWELD-DASFMTSSEGIKLIDDYECRLKRADRL 253
+ + L E+LVKW GL Y + TWE D D +F + ID+Y+ R
Sbjct: 541 DRISKDGLGDVVPEYLVKWQGLSYAEATWEKDVDIAFAQVA-----IDEYKAREVSIAVQ 595
Query: 254 SNPFEAK--ERKASLAELSVPASGDLPG-LYNQHLSYVTKLHMCWHKGQNALILEDQIDQ 310
E + + KASL +L + G L + L + L W N +IL D++
Sbjct: 596 GKMVEQQRTKGKASLRKLDEQPEWLIGGTLRDYQLEGLNFLVNSWLNDTN-VILADEMGL 654
Query: 311 ERVMKVI--LFILSLNHNVKRPFLIITTSSGLTVWETEFLHLAPSANLVVYKGNKDVRSC 368
+ ++ + L L + PFL++ S L W EF P N++VY G + R
Sbjct: 655 GKTVQSVSMLGFLQNTQQIPGPFLVVVPLSTLANWAKEFRKWLPGMNIIVYVGTRASREV 714
Query: 369 IRALEFYNEDG---GILFQILLSSSDIIVEDLHELRCISWEAIIIDECQRSKSLSHIDYI 425
+ EFYNE I F LL++ +++++D L I W +++DE R K+ Y
Sbjct: 715 CQQYEFYNEKKVGRPIKFNALLTTYEVVLKDKAVLSKIKWIYLMVDEAHRLKNSEAQLYT 774
Query: 426 RTL--AAEMRLLLVSGQIKEDRADYIKLLSFLKSGHHR------LNIAQMETYFSASISN 477
L + + +LL+ ++ + LL FL G + N + ++ + ++N
Sbjct: 775 ALLEFSTKNKLLITGTPLQNSVEELWALLHFLDPGKFKNKDEFVENYKNLSSFNESELAN 834
Query: 478 LKSQLKQYVAYKCNSGSTRF----VEHWVPAQLSNLQLEQYCXXXXXXXXXXXXXXXXDT 533
L +L+ ++ + + +E + ++S LQ + Y +
Sbjct: 835 LHLELRPHILRRVIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQ 894
Query: 534 VDALRDLIISTRKCCNHPYLLDPSLHNFVTRGRPVEEH--LNIGIKASGKLQLLERILFE 591
V +L ++++ +KCCNHP+L + + H + G + ++ L+ I +SGKL +L+++L
Sbjct: 895 V-SLLNIVVELKKCCNHPFLFESADHGY---GGDINDNSKLDKIILSSGKLVILDKLLVR 950
Query: 592 ARRRGLRVLIIFQSSDGSGSIGNILDDVLCQRFGQDCYVRYDRGYIKSKKQAALDTFNDK 651
R RVLI Q + +IL + L R Q + R D +Q A+D FN
Sbjct: 951 LRETKHRVLIFSQMV----RMLDILAEYLSLRGFQ--FQRLDGSTKAELRQQAMDHFNAP 1004
Query: 652 ESGKFVFLMEIRDCLPSVKLSSVDTVILFDSDWDPQNDLRCLQKMSVSSQFSQLTVFRLY 711
S F FL+ R + L++ DTV++FDSDW+PQNDL+ + + Q + ++R
Sbjct: 1005 ASDDFCFLLSTRAGGLGINLATADTVVIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFV 1064
Query: 712 SYFTVEEKVLMLAKEGI--------RLTVDNNMQL--------INQSICHALLKWGASYL 755
+ +VEE++L AK + +L + ++ +++ A+L++GA L
Sbjct: 1065 TSKSVEEEILERAKRKMVLDHLVIQKLNAEGRLEKRETKKGSNFDKNELSAILRFGAEEL 1124
Query: 756 F 756
F
Sbjct: 1125 F 1125
>AT4G31900.1 | Symbols: PKR2 | chromatin remodeling factor, putative
| chr4:15431528-15438443 FORWARD LENGTH=1202
Length = 1202
Score = 172 bits (435), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 171/691 (24%), Positives = 297/691 (42%), Gaps = 77/691 (11%)
Query: 122 VTQTEYFVKYKGLAHAHNCWIPEIQMLLEAQKLLAKFKRKLQVVSWRRHWS--------- 172
V +Y VK+KGL++ H W+PE Q +A K K KL+V +
Sbjct: 74 VVVKQYLVKWKGLSYLHCSWVPE-QEFEKAYKSHPHLKLKLRVTRFNAAMDVFIAENGAH 132
Query: 173 -----KPQRLLLKRAIVLPKQNDQHFDAHKHNGKDLAYRYEWLVKWTGLGYEQVTWEL-- 225
+P+ + R I + +D E+LVK+ L Y WE
Sbjct: 133 EFIAIRPEWKTVDRIIACREGDDGE---------------EYLVKYKELSYRNSYWESES 177
Query: 226 DDASFMTSSEGIKLIDDYECRLKRADRLSNPFEAKERKASLAELSVPASGDLPGLYNQHL 285
D + F + K I+ R K + N E K+ + L+ L+ L
Sbjct: 178 DISDFQNEIQRFKDINSSSRRDKYVENERNREEFKQFDLTPEFLT-------GTLHTYQL 230
Query: 286 SYVTKLHMCWHKGQNALILEDQIDQERVMKVILFILSLNHNVKRPFLIITTSSGLTVWET 345
+ L W K N +IL D++ + ++ I F+ SL P L++ S + WE
Sbjct: 231 EGLNFLRYSWSKKTN-VILADEMGLGKTIQSIAFLASLFEENLSPHLVVAPLSTIRNWER 289
Query: 346 EFLHLAPSANLVVYKGNKDVRSCIRALEFYNEDG-GILFQILLSSSDIIVEDLHELRCIS 404
EF AP N+V+Y G+ + R I EFY +G F +LL++ +++ + L I
Sbjct: 290 EFATWAPHMNVVMYTGDSEARDVIWEHEFYFSEGRKSKFDVLLTTYEMVHPGISVLSPIK 349
Query: 405 WEAIIIDECQRSKSLSHIDY--IRTLAAEMRLLLVSGQIKEDRADYIKLLSFLKSGHHRL 462
W +IIDE R K+ Y + ++ +LL ++ + + L+ FL +
Sbjct: 350 WTCMIIDEGHRLKNQKSKLYSSLSQFTSKHIVLLTGTPLQNNLNELFALMHFLDAD---- 405
Query: 463 NIAQMETYFSASISNLKSQLKQYVA-YKCNSGSTRFVEHWVPAQ--------LSNLQLEQ 513
+E + + S+L Q +A + ++ VP + +S+ Q E
Sbjct: 406 KFGSLEKFQDINKEEQISRLHQMLAPHLLRRLKKDVLKDKVPPKKELILRVDMSSQQKEV 465
Query: 514 YCXXXXXXXXXXXXXXXXDTVDALRDLIISTRKCCNHPYLLDPSLHNFVTRGRPVEEHLN 573
Y + ++++ R+ C+HPYLL +F R E
Sbjct: 466 YKAVITNNYQVLTKKRDA----KISNVLMKLRQVCSHPYLLP----DFEPRFEDANEAFT 517
Query: 574 IGIKASGKLQLLERILFEARRRGLRVLIIFQSSDGSGSIGNILDDVLCQRFGQDCYVRYD 633
++ASGKLQLL++++ + + +G RVLI Q +L+D F Y R D
Sbjct: 518 KLLEASGKLQLLDKMMVKLKEQGHRVLIYTQFQ----HTLYLLEDYFT--FKNWNYERID 571
Query: 634 RGYIKSKKQAALDTFNDKESGKFVFLMEIRDCLPSVKLSSVDTVILFDSDWDPQNDLRCL 693
++Q +D FN + S +F FL+ R + L++ DTVI++DSDW+P DL+ +
Sbjct: 572 GKISGPERQVRIDRFNAENSNRFCFLLSTRAGGIGINLATADTVIIYDSDWNPHADLQAM 631
Query: 694 QKMSVSSQFSQLTVFRLYSYFTVEEKVLMLAKEGIRLTVDNNMQLINQSICH----ALLK 749
++ Q +++ ++RL TVEE+++ + K + L ++ + Q +C ++K
Sbjct: 632 ARVHRLGQTNKVMIYRLIHKGTVEERMMEITKNKMLL---EHLVVGKQHLCQDELDDIIK 688
Query: 750 WGASYLFDKLDYLHGGEFSVSAPDICSDQSL 780
+G+ LF + + G + D +Q L
Sbjct: 689 YGSKELFSEENDEAGRSGKIHYDDAAIEQLL 719
>AT4G31900.2 | Symbols: PKR2 | chromatin remodeling factor, putative
| chr4:15431528-15438443 FORWARD LENGTH=1161
Length = 1161
Score = 158 bits (400), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 145/567 (25%), Positives = 254/567 (44%), Gaps = 47/567 (8%)
Query: 208 EWLVKWTGLGYEQVTWEL--DDASFMTSSEGIKLIDDYECRLKRADRLSNPFEAKERKAS 265
E+LVK+ L Y WE D + F + K I+ R K + N E K+ +
Sbjct: 117 EYLVKYKELSYRNSYWESESDISDFQNEIQRFKDINSSSRRDKYVENERNREEFKQFDLT 176
Query: 266 LAELSVPASGDLPGLYNQHLSYVTKLHMCWHKGQNALILEDQIDQERVMKVILFILSLNH 325
L+ L+ L + L W K N +IL D++ + ++ I F+ SL
Sbjct: 177 PEFLT-------GTLHTYQLEGLNFLRYSWSKKTN-VILADEMGLGKTIQSIAFLASLFE 228
Query: 326 NVKRPFLIITTSSGLTVWETEFLHLAPSANLVVYKGNKDVRSCIRALEFYNEDG-GILFQ 384
P L++ S + WE EF AP N+V+Y G+ + R I EFY +G F
Sbjct: 229 ENLSPHLVVAPLSTIRNWEREFATWAPHMNVVMYTGDSEARDVIWEHEFYFSEGRKSKFD 288
Query: 385 ILLSSSDIIVEDLHELRCISWEAIIIDECQRSKSLSHIDY--IRTLAAEMRLLLVSGQIK 442
+LL++ +++ + L I W +IIDE R K+ Y + ++ +LL ++
Sbjct: 289 VLLTTYEMVHPGISVLSPIKWTCMIIDEGHRLKNQKSKLYSSLSQFTSKHIVLLTGTPLQ 348
Query: 443 EDRADYIKLLSFLKSGHHRLNIAQMETYFSASISNLKSQLKQYVA-YKCNSGSTRFVEHW 501
+ + L+ FL + +E + + S+L Q +A + ++
Sbjct: 349 NNLNELFALMHFLDAD----KFGSLEKFQDINKEEQISRLHQMLAPHLLRRLKKDVLKDK 404
Query: 502 VPAQ--------LSNLQLEQYCXXXXXXXXXXXXXXXXDTVDALRDLIISTRKCCNHPYL 553
VP + +S+ Q E Y + ++++ R+ C+HPYL
Sbjct: 405 VPPKKELILRVDMSSQQKEVYKAVITNNYQVLTKKRDA----KISNVLMKLRQVCSHPYL 460
Query: 554 LDPSLHNFVTRGRPVEEHLNIGIKASGKLQLLERILFEARRRGLRVLIIFQSSDGSGSIG 613
L +F R E ++ASGKLQLL++++ + + +G RVLI Q
Sbjct: 461 LP----DFEPRFEDANEAFTKLLEASGKLQLLDKMMVKLKEQGHRVLIYTQFQ----HTL 512
Query: 614 NILDDVLCQRFGQDCYVRYDRGYIKSKKQAALDTFNDKESGKFVFLMEIRDCLPSVKLSS 673
+L+D F Y R D ++Q +D FN + S +F FL+ R + L++
Sbjct: 513 YLLEDYFT--FKNWNYERIDGKISGPERQVRIDRFNAENSNRFCFLLSTRAGGIGINLAT 570
Query: 674 VDTVILFDSDWDPQNDLRCLQKMSVSSQFSQLTVFRLYSYFTVEEKVLMLAKEGIRLTVD 733
DTVI++DSDW+P DL+ + ++ Q +++ ++RL TVEE+++ + K + L
Sbjct: 571 ADTVIIYDSDWNPHADLQAMARVHRLGQTNKVMIYRLIHKGTVEERMMEITKNKMLL--- 627
Query: 734 NNMQLINQSICH----ALLKWGASYLF 756
++ + Q +C ++K+G+ LF
Sbjct: 628 EHLVVGKQHLCQDELDDIIKYGSKELF 654
>AT5G19310.1 | Symbols: | Homeotic gene regulator |
chr5:6498906-6503432 FORWARD LENGTH=1064
Length = 1064
Score = 135 bits (340), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 131/491 (26%), Positives = 221/491 (45%), Gaps = 64/491 (13%)
Query: 270 SVPASGDLPGLYNQHLSYVTKLHMCWHKGQNALILEDQIDQERVMKVILFILSL--NHNV 327
S+ G+L + L ++ L+ + G IL D++ + ++ I I L + ++
Sbjct: 379 SLLQGGELRSYQLEGLQWMVSLYNNDYNG----ILADEMGLGKTIQTIALIAYLLESKDL 434
Query: 328 KRPFLIITTSSGLTVWETEFLHLAPSANLVVYKGNKDVRSCIRALEFYNEDGGILFQILL 387
P LI+ + L WE EF APS + +Y G+K+ R+ IRA G F +L+
Sbjct: 435 HGPHLILAPKAVLPNWENEFALWAPSISAFLYDGSKEKRTEIRA-----RIAGGKFNVLI 489
Query: 388 SSSDIIVEDLHELRCISWEAIIIDECQRSKSLSHIDYIRTLAA----EMRLLLVSGQIKE 443
+ D+I+ D L+ I W +I+DE R K+ +TL + RLLL I+
Sbjct: 490 THYDLIMRDKAFLKKIDWNYMIVDEGHRLKN-HECALAKTLGTGYRIKRRLLLTGTPIQN 548
Query: 444 DRADYIKLLSFLKSGHHRLNIAQMETYF--------SAS---------ISNLKSQLKQYV 486
+ LL+FL H +I E +F SAS I+ L ++ ++
Sbjct: 549 SLQELWSLLNFLLP-HIFNSIHNFEEWFNTPFAECGSASLTDEEELLIINRLHHVIRPFL 607
Query: 487 AYKCNSGSTRFVEHWVPAQLSNLQLEQYCXXXXXXXXXXXXXXXXDTVD---------AL 537
+ S VE ++P + Q+ C V +L
Sbjct: 608 LRRKKSE----VEKFLPGKT---QVILKCDMSAWQKLYYKQVTDVGRVGLHSGNGKSKSL 660
Query: 538 RDLIISTRKCCNHPYLLDPSLHNFVTRGRPVEEHLNIGIKASGKLQLLERILFEARRRGL 597
++L + RKCCNHPYL + +N + V +ASGK +LL+R+L + ++ G
Sbjct: 661 QNLTMQLRKCCNHPYLFVGADYNMCKKPEIV--------RASGKFELLDRLLPKLKKAGH 712
Query: 598 RVLIIFQSSDGSGSIGNILDDVLCQRFGQDCYVRYDRGYIKSKKQAALDTFNDKESGKFV 657
R+L+ Q + + ++L+ L Y+R D ++ L FN+ +S F+
Sbjct: 713 RILLFSQMT----RLIDLLEIYLS--LNDYMYLRLDGSTKTDQRGILLKQFNEPDSPYFM 766
Query: 658 FLMEIRDCLPSVKLSSVDTVILFDSDWDPQNDLRCLQKMSVSSQFSQLTVFRLYSYFTVE 717
FL+ R + L + DT+I+FDSDW+PQ D + + Q ++ VF L S ++E
Sbjct: 767 FLLSTRAGGLGLNLQTADTIIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSIGSIE 826
Query: 718 EKVLMLAKEGI 728
E +L AK+ +
Sbjct: 827 EVILERAKQKM 837
>AT3G06010.1 | Symbols: ATCHR12 | Homeotic gene regulator |
chr3:1802435-1807284 REVERSE LENGTH=1102
Length = 1102
Score = 129 bits (325), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 125/453 (27%), Positives = 201/453 (44%), Gaps = 53/453 (11%)
Query: 303 ILEDQIDQERVMKVILFILSL--NHNVKRPFLIITTSSGLTVWETEFLHLAPSANLVVYK 360
IL D++ + ++ I I L N V P+LI+ + L W EF PS +Y
Sbjct: 425 ILADEMGLGKTIQTISLIAYLLENKGVPGPYLIVAPKAVLPNWVNEFATWVPSIAAFLYD 484
Query: 361 GNKDVRSCIRALEFYNEDGGILFQILLSSSDIIVEDLHELRCISWEAIIIDECQRSKSLS 420
G + R IR E +G F +L++ D+I+ D L+ I W +I+DE R K+
Sbjct: 485 GRLEERKAIR--EKIAGEGK--FNVLITHYDLIMRDKAFLKKIEWYYMIVDEGHRLKN-H 539
Query: 421 HIDYIRTLAA----EMRLLLVSGQIKEDRADYIKLLSFLKSGHHRLNIAQ-METYFSASI 475
+TL + RLLL I+ + LL+FL H N Q E +F+A
Sbjct: 540 ESALAKTLLTGYRIKRRLLLTGTPIQNSLQELWSLLNFLLP--HIFNSVQNFEEWFNAPF 597
Query: 476 SN-----LKSQLKQYVAYKCNSGSTRF--------VEHWVPAQLSNLQLEQYCXXXXXXX 522
++ L + + + ++ + F VE ++P + Q+ C
Sbjct: 598 ADRGNVSLTDEEELLIIHRLHHVIRPFILRRKKDEVEKFLPGKT---QVILKCDMSAWQK 654
Query: 523 XXXXXXXXXDTVD---------ALRDLIISTRKCCNHPYLLDPSLHNFVTRGRPVEEHLN 573
V +L++L + RKCCNHPYL +N + V
Sbjct: 655 VYYKQVTDMGRVGLQTGSGKSKSLQNLTMQLRKCCNHPYLFVGGDYNMWKKPEIV----- 709
Query: 574 IGIKASGKLQLLERILFEARRRGLRVLIIFQSSDGSGSIGNILDDVLCQRFGQDCYVRYD 633
+ASGK +LL+R+L + R+ G R+L+ Q + + ++L+ L Y+R D
Sbjct: 710 ---RASGKFELLDRLLPKLRKAGHRILLFSQMT----RLIDVLEIYLT--LNDYKYLRLD 760
Query: 634 RGYIKSKKQAALDTFNDKESGKFVFLMEIRDCLPSVKLSSVDTVILFDSDWDPQNDLRCL 693
++ L FN+ +S F+FL+ R + L + DTVI+FDSDW+PQ D +
Sbjct: 761 GTTKTDQRGLLLKQFNEPDSPYFMFLLSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQAE 820
Query: 694 QKMSVSSQFSQLTVFRLYSYFTVEEKVLMLAKE 726
+ Q ++ VF L S +VEE +L AK+
Sbjct: 821 DRAHRIGQKKEVRVFVLVSVGSVEEVILERAKQ 853
>AT2G44980.1 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein | chr2:18552440-18556669
REVERSE LENGTH=851
Length = 851
Score = 124 bits (312), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 137/526 (26%), Positives = 230/526 (43%), Gaps = 49/526 (9%)
Query: 242 DYECRLKRADRLSNPFEAK--ERKASLAELSVPASGDLPGLYNQHLSYVTKLHMCWHKGQ 299
+YE RL+ A + EAK +E V A+ L + V+ L + G
Sbjct: 16 EYERRLEAAAEIILEKEAKFSNTPPDCSEFGVTAT-----LKPHQVEGVSWLIQKYLLGV 70
Query: 300 NALILEDQIDQERVMKVILFI--LSLNHNVKRPFLIITTSSGLTVWETEFLHLAPSANLV 357
N ++ DQ+ + ++ I F+ L + PFL++ S W +E P+ ++
Sbjct: 71 NVVLELDQMGLGKTLQAISFLSYLKFRQGLPGPFLVLCPLSVTDGWVSEINRFTPNLEVL 130
Query: 358 VYKGNKDVRSCIRALEFYNEDGGILFQILLSSSDIIVEDLHELRCISWEAIIIDECQRSK 417
Y G+K R +R Y+ + F +LL++ DI + D L I W+ IIDE QR K
Sbjct: 131 RYVGDKYCRLDMRK-SMYDHGHFLPFDVLLTTYDIALVDQDFLSQIPWQYAIIDEAQRLK 189
Query: 418 SLSHIDY---IRTLAAEMRLLLVSGQIKEDRADYIKLLSF---------------LKSGH 459
+ + + Y + RLL+ I+ + + L+ F K
Sbjct: 190 NPNSVLYNVLLEQFLIPRRLLITGTPIQNNLTELWALMHFCMPLVFGTLDQFLSAFKETG 249
Query: 460 HRLNIAQ-METYFSASISNLKSQLKQYVAYKCNSGST---RFVEHWVPAQLSNLQLEQYC 515
L+++ ETY S L++ + SG+ E V L +LQ + Y
Sbjct: 250 DGLDVSNDKETYKSLKFILGAFMLRRTKSLLIESGNLVLPPLTELTVMVPLVSLQKKIYT 309
Query: 516 XXXXXXXXXXXXXXXXDTV-DALRDLIISTRKCCNHPYLLDPSLHNFVTRGRPVEEHLNI 574
+ +L++++I RK C+HPYL P + P EE ++
Sbjct: 310 SILRKELPGLLELSSGGSNHTSLQNIVIQLRKACSHPYLF-PGIEP-----EPFEEGEHL 363
Query: 575 GIKASGKLQLLERILFEARRRGLRVLIIFQSSDGSGSIGNILDDVLCQRFGQDCYVRYDR 634
++ASGKL +L+++L G RVL+ Q + S +IL D + R + Y R D
Sbjct: 364 -VQASGKLLVLDQLLKRLHDSGHRVLLFSQMT----STLDILQDFMELR--RYSYERLDG 416
Query: 635 GYIKSKKQAALDTFNDKESGKFVFLMEIRDCLPSVKLSSVDTVILFDSDWDPQNDLRCLQ 694
++ AA+ F+ S FVF++ R + L + DTVI ++ DW+PQ D + LQ
Sbjct: 417 SVRAEERFAAIKNFSVDGSNAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQ 476
Query: 695 KMSVSSQFSQLTVFRLYSYFTVEEKVLMLAKEGIRLT---VDNNMQ 737
+ Q S + L + +VEE +L A+ ++L+ V +NM+
Sbjct: 477 RAHRIGQISHVLSINLVTEHSVEEVILRRAERKLQLSHNVVGDNME 522
>AT2G28290.3 | Symbols: SYD, CHR3 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr2:12056771-12072950 FORWARD LENGTH=3543
Length = 3543
Score = 117 bits (293), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 131/517 (25%), Positives = 219/517 (42%), Gaps = 72/517 (13%)
Query: 277 LPGLYNQHLSYVTKLHMCWHKGQNALILEDQIDQERVMKVILFILSL--NHNVKRPFLII 334
L LYN HL+ IL D++ + ++VI I L N + PFL++
Sbjct: 765 LVSLYNNHLNG---------------ILADEMGLGKTVQVISLICYLMETKNDRGPFLVV 809
Query: 335 TTSSGLTVWETEFLHLAPSANLVVYKGNKDVRSCIRALEFYNEDGGILFQILLSSSDIIV 394
SS L W++E APS + +VY G D R + + ++ F +LL++ + ++
Sbjct: 810 VPSSVLPGWQSEINFWAPSIHKIVYCGTPDERRKLFKEQIVHQK----FNVLLTTYEYLM 865
Query: 395 E--DLHELRCISWEAIIIDECQRSKSLS---HIDYIRTLAAEMRLLLVSGQIKEDRADYI 449
D +L I W IIIDE R K+ S + D ++ + RLLL ++ + +
Sbjct: 866 NKHDRPKLSKIHWHYIIIDEGHRIKNASCKLNAD-LKHYVSSHRLLLTGTPLQNNLEELW 924
Query: 450 KLLS--------------------FLKSGHHRLNIAQMETYFSASISN-LKSQLKQYVAY 488
LL+ F +G A + + I N L L+ +V
Sbjct: 925 ALLNFLLPNIFNSSEDFSQWFNKPFQSNGESSAEEALLSEEENLLIINRLHQVLRPFVLR 984
Query: 489 KCNSGSTRFVEHWVPAQLSNL---QLEQYCXXXXXXXXXXXXXXXXDTVDALRDLIISTR 545
+ VE+ +P ++ L + Y A+ + ++ R
Sbjct: 985 RLK----HKVENELPEKIERLIRCEASAYQKLLMKRVEDNLGSIGNAKSRAVHNSVMELR 1040
Query: 546 KCCNHPYLLDPSLHNFVTRGRPVEEHLNIGIKASGKLQLLERILFEARRRGLRVLIIFQS 605
CNHPYL LH+ + L ++ GKL++L+R+L + + RVL
Sbjct: 1041 NICNHPYL--SQLHSEEVNNIIPKHFLPPIVRLCGKLEMLDRMLPKLKATDHRVLFFSTM 1098
Query: 606 SDGSGSIGNILDDVLCQRFGQDCYVRYDRGYIKSKKQAALDTFNDKESGKFVFLMEIRDC 665
+ + ++++D L + + Y+R D + A +D FN S F+FL+ IR
Sbjct: 1099 T----RLLDVMEDYLTLKGYK--YLRLDGQTSGGDRGALIDGFNKSGSPFFIFLLSIRAG 1152
Query: 666 LPSVKLSSVDTVILFDSDWDPQNDLRCLQKMSVSSQFSQLTVFRLYSYFTVEEKVLMLAK 725
V L + DTVILFD+DW+PQ DL+ + Q + V R + +VEE+V
Sbjct: 1153 GVGVNLQAADTVILFDTDWNPQVDLQAQARAHRIGQKKDVLVLRFETVNSVEEQV----- 1207
Query: 726 EGIRLTVDNNMQLINQSICHALLKWGASYLFDKLDYL 762
R + ++ + + NQSI S D+ +YL
Sbjct: 1208 ---RASAEHKLGVANQSITAGFFDNNTSA-EDRKEYL 1240
>AT2G28290.1 | Symbols: SYD, CHR3 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr2:12056771-12072950 FORWARD LENGTH=3574
Length = 3574
Score = 117 bits (293), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 131/517 (25%), Positives = 219/517 (42%), Gaps = 72/517 (13%)
Query: 277 LPGLYNQHLSYVTKLHMCWHKGQNALILEDQIDQERVMKVILFILSL--NHNVKRPFLII 334
L LYN HL+ IL D++ + ++VI I L N + PFL++
Sbjct: 765 LVSLYNNHLNG---------------ILADEMGLGKTVQVISLICYLMETKNDRGPFLVV 809
Query: 335 TTSSGLTVWETEFLHLAPSANLVVYKGNKDVRSCIRALEFYNEDGGILFQILLSSSDIIV 394
SS L W++E APS + +VY G D R + + ++ F +LL++ + ++
Sbjct: 810 VPSSVLPGWQSEINFWAPSIHKIVYCGTPDERRKLFKEQIVHQK----FNVLLTTYEYLM 865
Query: 395 E--DLHELRCISWEAIIIDECQRSKSLS---HIDYIRTLAAEMRLLLVSGQIKEDRADYI 449
D +L I W IIIDE R K+ S + D ++ + RLLL ++ + +
Sbjct: 866 NKHDRPKLSKIHWHYIIIDEGHRIKNASCKLNAD-LKHYVSSHRLLLTGTPLQNNLEELW 924
Query: 450 KLLS--------------------FLKSGHHRLNIAQMETYFSASISN-LKSQLKQYVAY 488
LL+ F +G A + + I N L L+ +V
Sbjct: 925 ALLNFLLPNIFNSSEDFSQWFNKPFQSNGESSAEEALLSEEENLLIINRLHQVLRPFVLR 984
Query: 489 KCNSGSTRFVEHWVPAQLSNL---QLEQYCXXXXXXXXXXXXXXXXDTVDALRDLIISTR 545
+ VE+ +P ++ L + Y A+ + ++ R
Sbjct: 985 RLK----HKVENELPEKIERLIRCEASAYQKLLMKRVEDNLGSIGNAKSRAVHNSVMELR 1040
Query: 546 KCCNHPYLLDPSLHNFVTRGRPVEEHLNIGIKASGKLQLLERILFEARRRGLRVLIIFQS 605
CNHPYL LH+ + L ++ GKL++L+R+L + + RVL
Sbjct: 1041 NICNHPYL--SQLHSEEVNNIIPKHFLPPIVRLCGKLEMLDRMLPKLKATDHRVLFFSTM 1098
Query: 606 SDGSGSIGNILDDVLCQRFGQDCYVRYDRGYIKSKKQAALDTFNDKESGKFVFLMEIRDC 665
+ + ++++D L + + Y+R D + A +D FN S F+FL+ IR
Sbjct: 1099 T----RLLDVMEDYLTLKGYK--YLRLDGQTSGGDRGALIDGFNKSGSPFFIFLLSIRAG 1152
Query: 666 LPSVKLSSVDTVILFDSDWDPQNDLRCLQKMSVSSQFSQLTVFRLYSYFTVEEKVLMLAK 725
V L + DTVILFD+DW+PQ DL+ + Q + V R + +VEE+V
Sbjct: 1153 GVGVNLQAADTVILFDTDWNPQVDLQAQARAHRIGQKKDVLVLRFETVNSVEEQV----- 1207
Query: 726 EGIRLTVDNNMQLINQSICHALLKWGASYLFDKLDYL 762
R + ++ + + NQSI S D+ +YL
Sbjct: 1208 ---RASAEHKLGVANQSITAGFFDNNTSA-EDRKEYL 1240
>AT2G28290.2 | Symbols: SYD, CHR3 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr2:12056771-12072950 FORWARD LENGTH=3529
Length = 3529
Score = 117 bits (293), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 131/517 (25%), Positives = 219/517 (42%), Gaps = 72/517 (13%)
Query: 277 LPGLYNQHLSYVTKLHMCWHKGQNALILEDQIDQERVMKVILFILSL--NHNVKRPFLII 334
L LYN HL+ IL D++ + ++VI I L N + PFL++
Sbjct: 765 LVSLYNNHLNG---------------ILADEMGLGKTVQVISLICYLMETKNDRGPFLVV 809
Query: 335 TTSSGLTVWETEFLHLAPSANLVVYKGNKDVRSCIRALEFYNEDGGILFQILLSSSDIIV 394
SS L W++E APS + +VY G D R + + ++ F +LL++ + ++
Sbjct: 810 VPSSVLPGWQSEINFWAPSIHKIVYCGTPDERRKLFKEQIVHQK----FNVLLTTYEYLM 865
Query: 395 E--DLHELRCISWEAIIIDECQRSKSLS---HIDYIRTLAAEMRLLLVSGQIKEDRADYI 449
D +L I W IIIDE R K+ S + D ++ + RLLL ++ + +
Sbjct: 866 NKHDRPKLSKIHWHYIIIDEGHRIKNASCKLNAD-LKHYVSSHRLLLTGTPLQNNLEELW 924
Query: 450 KLLS--------------------FLKSGHHRLNIAQMETYFSASISN-LKSQLKQYVAY 488
LL+ F +G A + + I N L L+ +V
Sbjct: 925 ALLNFLLPNIFNSSEDFSQWFNKPFQSNGESSAEEALLSEEENLLIINRLHQVLRPFVLR 984
Query: 489 KCNSGSTRFVEHWVPAQLSNL---QLEQYCXXXXXXXXXXXXXXXXDTVDALRDLIISTR 545
+ VE+ +P ++ L + Y A+ + ++ R
Sbjct: 985 RLK----HKVENELPEKIERLIRCEASAYQKLLMKRVEDNLGSIGNAKSRAVHNSVMELR 1040
Query: 546 KCCNHPYLLDPSLHNFVTRGRPVEEHLNIGIKASGKLQLLERILFEARRRGLRVLIIFQS 605
CNHPYL LH+ + L ++ GKL++L+R+L + + RVL
Sbjct: 1041 NICNHPYL--SQLHSEEVNNIIPKHFLPPIVRLCGKLEMLDRMLPKLKATDHRVLFFSTM 1098
Query: 606 SDGSGSIGNILDDVLCQRFGQDCYVRYDRGYIKSKKQAALDTFNDKESGKFVFLMEIRDC 665
+ + ++++D L + + Y+R D + A +D FN S F+FL+ IR
Sbjct: 1099 T----RLLDVMEDYLTLKGYK--YLRLDGQTSGGDRGALIDGFNKSGSPFFIFLLSIRAG 1152
Query: 666 LPSVKLSSVDTVILFDSDWDPQNDLRCLQKMSVSSQFSQLTVFRLYSYFTVEEKVLMLAK 725
V L + DTVILFD+DW+PQ DL+ + Q + V R + +VEE+V
Sbjct: 1153 GVGVNLQAADTVILFDTDWNPQVDLQAQARAHRIGQKKDVLVLRFETVNSVEEQV----- 1207
Query: 726 EGIRLTVDNNMQLINQSICHALLKWGASYLFDKLDYL 762
R + ++ + + NQSI S D+ +YL
Sbjct: 1208 ---RASAEHKLGVANQSITAGFFDNNTSA-EDRKEYL 1240
>AT3G06400.3 | Symbols: CHR11 | chromatin-remodeling protein 11 |
chr3:1941066-1946700 FORWARD LENGTH=1057
Length = 1057
Score = 115 bits (289), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 129/508 (25%), Positives = 223/508 (43%), Gaps = 60/508 (11%)
Query: 284 HLSYVTKLHMCWHKGQNALILEDQIDQERVMKVILFILSLN--HNVKRPFLIITTSSGLT 341
L+ + L + G N IL D++ + ++ I + L+ + P +++ S L
Sbjct: 193 QLAGLNWLIRLYENGING-ILADEMGLGKTLQTISLLAYLHEYRGINGPHMVVAPKSTLG 251
Query: 342 VWETEFLHLAPSANLVVYKGNKDVRSCIRALEFYNEDGGIL--FQILLSSSDIIVEDLHE 399
W E P V + GN + R IR ED + F I ++S ++ +++
Sbjct: 252 NWMNEIRRFCPVLRAVKFLGNPEERRHIR------EDLLVAGKFDICVTSFEMAIKEKTA 305
Query: 400 LRCISWEAIIIDECQRSKSLSHI--DYIRTLAAEMRLLLVSGQIKEDRADYIKLLSFLKS 457
LR SW IIIDE R K+ + + +R + RLL+ ++ + + LL+FL
Sbjct: 306 LRRFSWRYIIIDEAHRIKNENSLLSKTMRLFSTNYRLLITGTPLQNNLHELWALLNFLLP 365
Query: 458 GHHRLNIAQMETYFSASISN--------LKSQLKQYVAYKCNSGSTRFVEHWVPAQLSNL 509
+ + +F S N L L+ ++ + S VE +P + +
Sbjct: 366 EIFS-SAETFDEWFQISGENDQQEVVQQLHKVLRPFLLRRLKSD----VEKGLPPKKETI 420
Query: 510 QLEQYCXXXXXXXXXXXXXXXXDTVDA------LRDLIISTRKCCNHPYLLDPSLHNFVT 563
L+ + V+A L ++ + RKCCNHPYL +
Sbjct: 421 -LKVGMSQMQKQYYKALLQKDLEAVNAGGERKRLLNIAMQLRKCCNHPYLFQGA-----E 474
Query: 564 RGRP--VEEHLNIGIKASGKLQLLERILFEARRRGLRVLIIFQSSDGSGSIGNILDDVLC 621
G P +HL I +GK+ LL+++L + + R RVLI Q + + +IL+D L
Sbjct: 475 PGPPYTTGDHL---ITNAGKMVLLDKLLPKLKERDSRVLIFSQMT----RLLDILEDYLM 527
Query: 622 QRFGQDCYVRYDRGYIKSKKQAALDTFNDKESGKFVFLMEIRDCLPSVKLSSVDTVILFD 681
R Y R D ++ A+++ +N S KFVFL+ R + L++ D VIL+D
Sbjct: 528 YR--GYLYCRIDGNTGGDERDASIEAYNKPGSEKFVFLLSTRAGGLGINLATADVVILYD 585
Query: 682 SDWDPQNDLRCLQKMSVSSQFSQLTVFRLYSYFTVEEKVLMLAKEGIRLTVD-------- 733
SDW+PQ DL+ + Q ++ VFR + +EEKV+ A + +L +D
Sbjct: 586 SDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTESAIEEKVIERAYK--KLALDALVIQQGR 643
Query: 734 -NNMQLINQSICHALLKWGASYLFDKLD 760
+ +N+ ++++GA +F D
Sbjct: 644 LAEQKTVNKDELLQMVRYGAEMVFSSKD 671
>AT3G06400.1 | Symbols: CHR11 | chromatin-remodeling protein 11 |
chr3:1941066-1946700 FORWARD LENGTH=1055
Length = 1055
Score = 115 bits (289), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 129/508 (25%), Positives = 223/508 (43%), Gaps = 60/508 (11%)
Query: 284 HLSYVTKLHMCWHKGQNALILEDQIDQERVMKVILFILSLN--HNVKRPFLIITTSSGLT 341
L+ + L + G N IL D++ + ++ I + L+ + P +++ S L
Sbjct: 193 QLAGLNWLIRLYENGING-ILADEMGLGKTLQTISLLAYLHEYRGINGPHMVVAPKSTLG 251
Query: 342 VWETEFLHLAPSANLVVYKGNKDVRSCIRALEFYNEDGGIL--FQILLSSSDIIVEDLHE 399
W E P V + GN + R IR ED + F I ++S ++ +++
Sbjct: 252 NWMNEIRRFCPVLRAVKFLGNPEERRHIR------EDLLVAGKFDICVTSFEMAIKEKTA 305
Query: 400 LRCISWEAIIIDECQRSKSLSHI--DYIRTLAAEMRLLLVSGQIKEDRADYIKLLSFLKS 457
LR SW IIIDE R K+ + + +R + RLL+ ++ + + LL+FL
Sbjct: 306 LRRFSWRYIIIDEAHRIKNENSLLSKTMRLFSTNYRLLITGTPLQNNLHELWALLNFLLP 365
Query: 458 GHHRLNIAQMETYFSASISN--------LKSQLKQYVAYKCNSGSTRFVEHWVPAQLSNL 509
+ + +F S N L L+ ++ + S VE +P + +
Sbjct: 366 EIFS-SAETFDEWFQISGENDQQEVVQQLHKVLRPFLLRRLKSD----VEKGLPPKKETI 420
Query: 510 QLEQYCXXXXXXXXXXXXXXXXDTVDA------LRDLIISTRKCCNHPYLLDPSLHNFVT 563
L+ + V+A L ++ + RKCCNHPYL +
Sbjct: 421 -LKVGMSQMQKQYYKALLQKDLEAVNAGGERKRLLNIAMQLRKCCNHPYLFQGA-----E 474
Query: 564 RGRP--VEEHLNIGIKASGKLQLLERILFEARRRGLRVLIIFQSSDGSGSIGNILDDVLC 621
G P +HL I +GK+ LL+++L + + R RVLI Q + + +IL+D L
Sbjct: 475 PGPPYTTGDHL---ITNAGKMVLLDKLLPKLKERDSRVLIFSQMT----RLLDILEDYLM 527
Query: 622 QRFGQDCYVRYDRGYIKSKKQAALDTFNDKESGKFVFLMEIRDCLPSVKLSSVDTVILFD 681
R Y R D ++ A+++ +N S KFVFL+ R + L++ D VIL+D
Sbjct: 528 YR--GYLYCRIDGNTGGDERDASIEAYNKPGSEKFVFLLSTRAGGLGINLATADVVILYD 585
Query: 682 SDWDPQNDLRCLQKMSVSSQFSQLTVFRLYSYFTVEEKVLMLAKEGIRLTVD-------- 733
SDW+PQ DL+ + Q ++ VFR + +EEKV+ A + +L +D
Sbjct: 586 SDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTESAIEEKVIERAYK--KLALDALVIQQGR 643
Query: 734 -NNMQLINQSICHALLKWGASYLFDKLD 760
+ +N+ ++++GA +F D
Sbjct: 644 LAEQKTVNKDELLQMVRYGAEMVFSSKD 671
>AT3G06400.2 | Symbols: CHR11 | chromatin-remodeling protein 11 |
chr3:1941066-1946700 FORWARD LENGTH=1056
Length = 1056
Score = 115 bits (289), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 129/508 (25%), Positives = 223/508 (43%), Gaps = 60/508 (11%)
Query: 284 HLSYVTKLHMCWHKGQNALILEDQIDQERVMKVILFILSLN--HNVKRPFLIITTSSGLT 341
L+ + L + G N IL D++ + ++ I + L+ + P +++ S L
Sbjct: 193 QLAGLNWLIRLYENGING-ILADEMGLGKTLQTISLLAYLHEYRGINGPHMVVAPKSTLG 251
Query: 342 VWETEFLHLAPSANLVVYKGNKDVRSCIRALEFYNEDGGIL--FQILLSSSDIIVEDLHE 399
W E P V + GN + R IR ED + F I ++S ++ +++
Sbjct: 252 NWMNEIRRFCPVLRAVKFLGNPEERRHIR------EDLLVAGKFDICVTSFEMAIKEKTA 305
Query: 400 LRCISWEAIIIDECQRSKSLSHI--DYIRTLAAEMRLLLVSGQIKEDRADYIKLLSFLKS 457
LR SW IIIDE R K+ + + +R + RLL+ ++ + + LL+FL
Sbjct: 306 LRRFSWRYIIIDEAHRIKNENSLLSKTMRLFSTNYRLLITGTPLQNNLHELWALLNFLLP 365
Query: 458 GHHRLNIAQMETYFSASISN--------LKSQLKQYVAYKCNSGSTRFVEHWVPAQLSNL 509
+ + +F S N L L+ ++ + S VE +P + +
Sbjct: 366 EIFS-SAETFDEWFQISGENDQQEVVQQLHKVLRPFLLRRLKSD----VEKGLPPKKETI 420
Query: 510 QLEQYCXXXXXXXXXXXXXXXXDTVDA------LRDLIISTRKCCNHPYLLDPSLHNFVT 563
L+ + V+A L ++ + RKCCNHPYL +
Sbjct: 421 -LKVGMSQMQKQYYKALLQKDLEAVNAGGERKRLLNIAMQLRKCCNHPYLFQGA-----E 474
Query: 564 RGRP--VEEHLNIGIKASGKLQLLERILFEARRRGLRVLIIFQSSDGSGSIGNILDDVLC 621
G P +HL I +GK+ LL+++L + + R RVLI Q + + +IL+D L
Sbjct: 475 PGPPYTTGDHL---ITNAGKMVLLDKLLPKLKERDSRVLIFSQMT----RLLDILEDYLM 527
Query: 622 QRFGQDCYVRYDRGYIKSKKQAALDTFNDKESGKFVFLMEIRDCLPSVKLSSVDTVILFD 681
R Y R D ++ A+++ +N S KFVFL+ R + L++ D VIL+D
Sbjct: 528 YR--GYLYCRIDGNTGGDERDASIEAYNKPGSEKFVFLLSTRAGGLGINLATADVVILYD 585
Query: 682 SDWDPQNDLRCLQKMSVSSQFSQLTVFRLYSYFTVEEKVLMLAKEGIRLTVD-------- 733
SDW+PQ DL+ + Q ++ VFR + +EEKV+ A + +L +D
Sbjct: 586 SDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTESAIEEKVIERAYK--KLALDALVIQQGR 643
Query: 734 -NNMQLINQSICHALLKWGASYLFDKLD 760
+ +N+ ++++GA +F D
Sbjct: 644 LAEQKTVNKDELLQMVRYGAEMVFSSKD 671
>AT5G18620.2 | Symbols: CHR17 | chromatin remodeling factor17 |
chr5:6196190-6202058 REVERSE LENGTH=1072
Length = 1072
Score = 114 bits (286), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 124/508 (24%), Positives = 221/508 (43%), Gaps = 52/508 (10%)
Query: 280 LYNQHLSYVTKLHMCWHKGQNALILEDQIDQERVMKVILFILSLN--HNVKRPFLIITTS 337
L + L+ + L + G N IL D++ + ++ I + L+ + P +++
Sbjct: 194 LRDYQLAGLNWLIRLYENGING-ILADEMGLGKTLQTISLLAYLHEYRGINGPHMVVAPK 252
Query: 338 SGLTVWETEFLHLAPSANLVVYKGNKDVRSCIRALEFYNEDGGILFQILLSSSDIIVEDL 397
S L W E P V + GN + R IR F I ++S ++ +++
Sbjct: 253 STLGNWMNEIRRFCPVLRAVKFLGNPEERRHIREELLVAGK----FDICVTSFEMAIKEK 308
Query: 398 HELRCISWEAIIIDECQRSKSLSHI--DYIRTLAAEMRLLLVSGQIKEDRADYIKLLSFL 455
LR SW IIIDE R K+ + + +R + RLL+ ++ + + LL+FL
Sbjct: 309 TTLRRFSWRYIIIDEAHRIKNENSLLSKTMRLFSTNYRLLITGTPLQNNLHELWALLNFL 368
Query: 456 KSGHHRLNIAQMETYFSASISN--------LKSQLKQYVAYKCNSGSTRFV----EHWVP 503
+ + +F S N L L+ ++ + S + + E +
Sbjct: 369 LPEVFS-SAETFDEWFQISGENDQQEVVQQLHKVLRPFLLRRLKSDVEKGLPPKKETILK 427
Query: 504 AQLSNLQLEQYCXXXXXXXXXXXXXXXXDTVDALRDLIISTRKCCNHPYLLDPSLHNFVT 563
+S +Q + Y L ++ + RKCCNHPYL +
Sbjct: 428 VGMSQMQKQYYKALLQKDLEVVNGGGERKR---LLNIAMQLRKCCNHPYLFQGA-----E 479
Query: 564 RGRP--VEEHLNIGIKASGKLQLLERILFEARRRGLRVLIIFQSSDGSGSIGNILDDVLC 621
G P +HL + +GK+ LL+++L + + R RVLI Q + + +IL+D L
Sbjct: 480 PGPPYTTGDHL---VTNAGKMVLLDKLLPKLKDRDSRVLIFSQMT----RLLDILEDYLM 532
Query: 622 QRFGQDCYVRYDRGYIKSKKQAALDTFNDKESGKFVFLMEIRDCLPSVKLSSVDTVILFD 681
R Q C + + G ++ A+++ +N S KFVFL+ R + L++ D VIL+D
Sbjct: 533 YRGYQYCRIDGNTG--GDERDASIEAYNKPGSEKFVFLLSTRAGGLGINLATADVVILYD 590
Query: 682 SDWDPQNDLRCLQKMSVSSQFSQLTVFRLYSYFTVEEKVLMLAKEGIRLTVD-------- 733
SDW+PQ DL+ + Q ++ VFR + +E KV+ A + +L +D
Sbjct: 591 SDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTENAIEAKVIERAYK--KLALDALVIQQGR 648
Query: 734 -NNMQLINQSICHALLKWGASYLFDKLD 760
+ +N+ ++++GA +F D
Sbjct: 649 LAEQKTVNKDELLQMVRYGAEMVFSSKD 676
>AT5G18620.1 | Symbols: CHR17 | chromatin remodeling factor17 |
chr5:6196190-6202058 REVERSE LENGTH=1069
Length = 1069
Score = 114 bits (286), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 123/508 (24%), Positives = 221/508 (43%), Gaps = 52/508 (10%)
Query: 280 LYNQHLSYVTKLHMCWHKGQNALILEDQIDQERVMKVILFILSLN--HNVKRPFLIITTS 337
L + L+ + L + G N IL D++ + ++ I + L+ + P +++
Sbjct: 194 LRDYQLAGLNWLIRLYENGING-ILADEMGLGKTLQTISLLAYLHEYRGINGPHMVVAPK 252
Query: 338 SGLTVWETEFLHLAPSANLVVYKGNKDVRSCIRALEFYNEDGGILFQILLSSSDIIVEDL 397
S L W E P V + GN + R IR F I ++S ++ +++
Sbjct: 253 STLGNWMNEIRRFCPVLRAVKFLGNPEERRHIREELLVAGK----FDICVTSFEMAIKEK 308
Query: 398 HELRCISWEAIIIDECQRSKSLSHI--DYIRTLAAEMRLLLVSGQIKEDRADYIKLLSFL 455
LR SW IIIDE R K+ + + +R + RLL+ ++ + + LL+FL
Sbjct: 309 TTLRRFSWRYIIIDEAHRIKNENSLLSKTMRLFSTNYRLLITGTPLQNNLHELWALLNFL 368
Query: 456 KSGHHRLNIAQMETYFSAS--------ISNLKSQLKQYVAYKCNSGSTRFV----EHWVP 503
+ + +F S + L L+ ++ + S + + E +
Sbjct: 369 LPEVFS-SAETFDEWFQISGENDQQEVVQQLHKVLRPFLLRRLKSDVEKGLPPKKETILK 427
Query: 504 AQLSNLQLEQYCXXXXXXXXXXXXXXXXDTVDALRDLIISTRKCCNHPYLLDPSLHNFVT 563
+S +Q + Y L ++ + RKCCNHPYL +
Sbjct: 428 VGMSQMQKQYYKALLQKDLEVVNGGGERKR---LLNIAMQLRKCCNHPYLFQGA-----E 479
Query: 564 RGRP--VEEHLNIGIKASGKLQLLERILFEARRRGLRVLIIFQSSDGSGSIGNILDDVLC 621
G P +HL + +GK+ LL+++L + + R RVLI Q + + +IL+D L
Sbjct: 480 PGPPYTTGDHL---VTNAGKMVLLDKLLPKLKDRDSRVLIFSQMT----RLLDILEDYLM 532
Query: 622 QRFGQDCYVRYDRGYIKSKKQAALDTFNDKESGKFVFLMEIRDCLPSVKLSSVDTVILFD 681
R Q C + + G ++ A+++ +N S KFVFL+ R + L++ D VIL+D
Sbjct: 533 YRGYQYCRIDGNTG--GDERDASIEAYNKPGSEKFVFLLSTRAGGLGINLATADVVILYD 590
Query: 682 SDWDPQNDLRCLQKMSVSSQFSQLTVFRLYSYFTVEEKVLMLAKEGIRLTVD-------- 733
SDW+PQ DL+ + Q ++ VFR + +E KV+ A + +L +D
Sbjct: 591 SDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTENAIEAKVIERAYK--KLALDALVIQQGR 648
Query: 734 -NNMQLINQSICHALLKWGASYLFDKLD 760
+ +N+ ++++GA +F D
Sbjct: 649 LAEQKTVNKDELLQMVRYGAEMVFSSKD 676
>AT2G44980.2 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein | chr2:18552343-18556669
REVERSE LENGTH=877
Length = 877
Score = 114 bits (284), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 139/544 (25%), Positives = 232/544 (42%), Gaps = 66/544 (12%)
Query: 242 DYECRLKRADRLSNPFEAK--ERKASLAELSVPASGDLPGLYNQHLSYVTKLHMCWHKGQ 299
+YE RL+ A + EAK +E V A+ L + V+ L + G
Sbjct: 16 EYERRLEAAAEIILEKEAKFSNTPPDCSEFGVTAT-----LKPHQVEGVSWLIQKYLLGV 70
Query: 300 NALILEDQIDQERVMKVILFI--LSLNHNVKRPFLIITTSSGLTVWETEFLHLAPSANLV 357
N ++ DQ+ + ++ I F+ L + PFL++ S W +E P+ ++
Sbjct: 71 NVVLELDQMGLGKTLQAISFLSYLKFRQGLPGPFLVLCPLSVTDGWVSEINRFTPNLEVL 130
Query: 358 VYKGNKDVRSCIRALEF----YNEDGGIL-FQILLSSSDIIVEDLHELRCISWEAIIIDE 412
Y G+K R +R + + G L F +LL++ DI + D L I W+ IIDE
Sbjct: 131 RYVGDKYCRLDMRKSMYDHVKKSSKGHFLPFDVLLTTYDIALVDQDFLSQIPWQYAIIDE 190
Query: 413 CQRSKSLSHIDY---IRTLAAEMRLLLVSGQIKEDRADYIKLLSF--------------- 454
QR K+ + + Y + RLL+ I+ + + L+ F
Sbjct: 191 AQRLKNPNSVLYNVLLEQFLIPRRLLITGTPIQNNLTELWALMHFCMPLVFGTLDQFLSA 250
Query: 455 ---LKSGHHRLNIAQ-METYFSASISNLKSQLKQYVAYKCNSGST---RFVEHWVPAQLS 507
G L+++ ETY S L++ + SG+ E V L
Sbjct: 251 FKETGDGLSGLDVSNDKETYKSLKFILGAFMLRRTKSLLIESGNLVLPPLTELTVMVPLV 310
Query: 508 NLQLEQYCXXXXXXXXXXXXXXXXDTV-DALRDLIISTRKCCNHPYLLDPSLHNFVTRGR 566
+LQ + Y + +L++++I RK C+HPYL P +
Sbjct: 311 SLQKKIYTSILRKELPGLLELSSGGSNHTSLQNIVIQLRKACSHPYLF-PGIEP-----E 364
Query: 567 PVEEHLNIGIKASGKLQLLERILFEARRRGLRVLIIFQSSDGSGSIGNILDDVLCQRFGQ 626
P EE ++ ++ASGKL +L+++L G RVL+ Q + S +IL D + R +
Sbjct: 365 PFEEGEHL-VQASGKLLVLDQLLKRLHDSGHRVLLFSQMT----STLDILQDFMELR--R 417
Query: 627 DCYVRYDRGYIKSKKQAALDTFNDKE----------SGKFVFLMEIRDCLPSVKLSSVDT 676
Y R D ++ AA+ F+ K S FVF++ R + L + DT
Sbjct: 418 YSYERLDGSVRAEERFAAIKNFSAKTERGLDSEVDGSNAFVFMISTRAGGVGLNLVAADT 477
Query: 677 VILFDSDWDPQNDLRCLQKMSVSSQFSQLTVFRLYSYFTVEEKVLMLAKEGIRLT---VD 733
VI ++ DW+PQ D + LQ+ Q S + L + +VEE +L A+ ++L+ V
Sbjct: 478 VIFYEQDWNPQVDKQALQRAHRIGQISHVLSINLVTEHSVEEVILRRAERKLQLSHNVVG 537
Query: 734 NNMQ 737
+NM+
Sbjct: 538 DNME 541
>AT5G66750.1 | Symbols: DDM1, CHR01, CHR1, CHA1, SOM4, SOM1, ATDDM1
| chromatin remodeling 1 | chr5:26649050-26652869
FORWARD LENGTH=764
Length = 764
Score = 104 bits (259), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 120/480 (25%), Positives = 211/480 (43%), Gaps = 42/480 (8%)
Query: 280 LYNQHLSYVTKLHMCWHKGQNALILEDQIDQERVMKVILFILSLNHN-VKRPFLIITTSS 338
L + L V L W G N IL DQ+ + ++ I F+ L N + P+L+I S
Sbjct: 202 LKSYQLKGVKWLISLWQNGLNG-ILADQMGLGKTIQTIGFLSHLKGNGLDGPYLVIAPLS 260
Query: 339 GLTVWETEFLHLAPSANLVVYKGNKDVRSCIRALEFYNEDGGILFQILLSSSDIIVEDLH 398
L+ W E PS N ++Y G+K+ R +R + + G F I+++S ++ + D
Sbjct: 261 TLSNWFNEIARFTPSINAIIYHGDKNQRDELRR-KHMPKTVGPKFPIVITSYEVAMNDAK 319
Query: 399 E-LRCISWEAIIIDECQRSKS--LSHIDYIRTLAAEMRLLLVSGQIKEDRADYIKLLS-- 453
LR W+ ++IDE R K+ + ++ L + +LLL ++ + ++ LL+
Sbjct: 320 RILRHYPWKYVVIDEGHRLKNHKCKLLRELKHLKMDNKLLLTGTPLQNNLSELWSLLNFI 379
Query: 454 ----------------FLKSGHHRLNIAQMETYFSASISNLKSQLKQYVA--YKCNSGST 495
F + + + E + +S L L+ ++ KC+ +
Sbjct: 380 LPDIFTSHDEFESWFDFSEKNKNEATKEEEEKRRAQVVSKLHGILRPFILRRMKCDVELS 439
Query: 496 --RFVEHWVPAQLSNLQ---LEQYCXXXXXXXXXXXXXXXXDTVDALRDLIISTRKCCNH 550
R E + A +++ Q E L +L+I RK CNH
Sbjct: 440 LPRKKEIIMYATMTDHQKKFQEHLVNNTLEAHLGENAIRGQGWKGKLNNLVIQLRKNCNH 499
Query: 551 PYLLDPSLHNFVTRGRPVEEHLNIGIKASGKLQLLERILFEARRRGLRVLIIFQSSDGSG 610
P LL + PVEE + GK +LLER+L +VLI Q +
Sbjct: 500 PDLLQGQIDGSYLYP-PVEEI----VGQCGKFRLLERLLVRLFANNHKVLIFSQWT---- 550
Query: 611 SIGNILDDVLCQRFGQDCYVRYDRGYIKSKKQAALDTFNDKESGKFVFLMEIRDCLPSVK 670
+ +I+D ++ + C R D +++ + F+D++S +FL+ R +
Sbjct: 551 KLLDIMDYYFSEKGFEVC--RIDGSVKLDERRRQIKDFSDEKSSCSIFLLSTRAGGLGIN 608
Query: 671 LSSVDTVILFDSDWDPQNDLRCLQKMSVSSQFSQLTVFRLYSYFTVEEKVLMLAKEGIRL 730
L++ DT IL+DSDW+PQ DL+ + + Q + V+RL + ++E +VL A ++L
Sbjct: 609 LTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLSTAQSIETRVLKRAYSKLKL 668
>AT2G18760.1 | Symbols: CHR8 | chromatin remodeling 8 |
chr2:8129154-8133502 FORWARD LENGTH=1187
Length = 1187
Score = 79.3 bits (194), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 91/375 (24%), Positives = 160/375 (42%), Gaps = 57/375 (15%)
Query: 381 ILFQILLSSSDIIVEDLHELRC-------ISWEAIIIDECQRSKSL-SHIDYI-RTLAAE 431
+L ++L S S +++ +LR I W ++DE R ++ S I + + L
Sbjct: 508 LLNRVLNSESGLLITTYEQLRLQGEKLLNIEWGYAVLDEGHRIRNPNSDITLVCKQLQTV 567
Query: 432 MRLLLVSGQIKEDRADYIKLLSFLKSGHHRLNIAQM-ETYFSASIS----NLKSQLKQYV 486
R+++ I+ + L F+ G +L + + E FS I+ S L+
Sbjct: 568 HRIIMTGAPIQNKLTELWSLFDFVFPG--KLGVLPVFEAEFSVPITVGGYANASPLQVST 625
Query: 487 AYKC--------------------NSGSTRFVEHWVPAQLSNLQLEQYCXXXXXXXXXXX 526
AY+C N+ T+ EH + +L +EQ
Sbjct: 626 AYRCAVVLRDLIMPYLLRRMKADVNAHLTKKTEHVL---FCSLTVEQRSTYRAFLASSEV 682
Query: 527 XXXXXDTVDALRDLIISTRKCCNHPYLLDPS-LHNFVTRGRPVEEHLNIGIKASGKLQLL 585
++L + + RK CNHP LL+ H G P + SGK++++
Sbjct: 683 EQIFDGNRNSLYGIDV-MRKICNHPDLLEREHSHQNPDYGNP---------ERSGKMKVV 732
Query: 586 ERILFEARRRGLRVLIIFQSSDGSGSIGNILDDVLCQRFGQDCYVRYDRGYIKSKKQAAL 645
+L +++G RVL+ Q+ + +IL+ L + Y R D ++ A +
Sbjct: 733 AEVLKVWKQQGHRVLLFSQTQ----QMLDILESFLVA--NEYSYRRMDGLTPVKQRMALI 786
Query: 646 DTFNDKESGKFVFLMEIRDCLPSVKLSSVDTVILFDSDWDPQNDLRCLQKMSVSSQFSQL 705
D FN+ E FVF++ + L+ + VI+FD DW+P ND++ ++ Q +
Sbjct: 787 DEFNNSED-MFVFVLTTKVGGLGTNLTGANRVIIFDPDWNPSNDMQARERAWRIGQKKDV 845
Query: 706 TVFRLYSYFTVEEKV 720
TV+RL + T+EEKV
Sbjct: 846 TVYRLITRGTIEEKV 860
>AT3G57300.1 | Symbols: INO80, ATINO80 | INO80 ortholog |
chr3:21199612-21207635 FORWARD LENGTH=1507
Length = 1507
Score = 75.5 bits (184), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 119/294 (40%), Gaps = 36/294 (12%)
Query: 294 CWHKGQNALILEDQIDQERVMKVILFI--LSLNHNVKRPFLIITTSSGLTVWETEFLHLA 351
C+ +G N IL D++ + ++ + F+ L+ N+ PFL++ +S L W E
Sbjct: 600 CYEQGLNG-ILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAPASVLNNWADEISRFC 658
Query: 352 PSANLVVYKGNKDVRSCIR----ALEFYNEDGGILFQILLSSSDIIVEDLHELRCISWEA 407
P + Y G R+ +R Y D G F IL++S ++V D R + W+
Sbjct: 659 PDLKTLPYWGGLQERTILRKNINPKRMYRRDAG--FHILITSYQLLVTDEKYFRRVKWQY 716
Query: 408 IIIDECQRSKSLSHIDYIRTLA--AEMRLLLVSGQIKEDRADYIKLLSFLKSGHHRLNIA 465
+++DE Q KS S I + L+ RLLL I+ + A+ LL F+ N
Sbjct: 717 MVLDEAQAIKSSSSIRWKTLLSFNCRNRLLLTGTPIQNNMAELWALLHFIMPMLFD-NHD 775
Query: 466 QMETYFSASISN---------------LKSQLKQYVAYKCN----SGSTRFVEHWVPAQL 506
Q +FS I N L + LK ++ + S T E V +L
Sbjct: 776 QFNEWFSKGIENHAEHGGTLNEHQLNRLHAILKPFMLRRVKKDVVSELTTKTEVTVHCKL 835
Query: 507 SNLQLEQYCXXXXXXXXXX-----XXXXXXDTVDALRDLIISTRKCCNHPYLLD 555
S+ Q Y V L +++I RK CNHP L +
Sbjct: 836 SSRQQAFYQAIKNKISLAELFDSNRGQFTDKKVLNLMNIVIQLRKVCNHPELFE 889
Score = 71.2 bits (173), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 77/148 (52%), Gaps = 7/148 (4%)
Query: 579 SGKLQLLERILFEARRRGLRVLIIFQSSDGSGSIGNILDDVLCQRFGQDCYVRYDRGYIK 638
SGKLQ L+ +L R RVL+ Q + + NIL+D + R + Y+R D
Sbjct: 1205 SGKLQTLDILLKRLRAGNHRVLLFAQMT----KMLNILEDYMNYR--KYKYLRLDGSSTI 1258
Query: 639 SKKQAALDTFNDKESGKFVFLMEIRDCLPSVKLSSVDTVILFDSDWDPQNDLRCLQKMSV 698
++ + F + S FVFL+ R + L++ DTVI ++SDW+P DL+ + +
Sbjct: 1259 MDRRDMVRDFQHR-SDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHR 1317
Query: 699 SSQFSQLTVFRLYSYFTVEEKVLMLAKE 726
Q +TV+RL TVEEK+L A +
Sbjct: 1318 LGQTKDVTVYRLICKETVEEKILHRASQ 1345
>AT2G46020.1 | Symbols: CHR2, ATBRM, BRM, CHA2 | transcription
regulatory protein SNF2, putative |
chr2:18923304-18931769 FORWARD LENGTH=2192
Length = 2192
Score = 73.2 bits (178), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 93/182 (51%), Gaps = 17/182 (9%)
Query: 537 LRDLIISTRKCCNHPYLLDPSLHNFVTRGRPVEEHLNIGIKASGKLQLLERILFEARRRG 596
L + + RK CNHP L P ++F + +++ GKL +L+RIL + +R G
Sbjct: 1273 LNNRCMELRKACNHPLLNYPYFNDFSK---------DFLVRSCGKLWILDRILIKLQRTG 1323
Query: 597 LRVLIIFQSSDGSGSIGNILDDVLCQRFGQDCYVRYDRGYIKSKKQAALDTFNDKESGKF 656
RVL+ + + +IL++ L R + Y R D +++A+ FND ++ F
Sbjct: 1324 HRVLLFSTMT----KLLDILEEYLQWR--RLVYRRIDGTTSLEDRESAIVDFNDPDTDCF 1377
Query: 657 VFLMEIRDCLPSVKLSSVDTVILFDSDWDPQNDLRCLQKMSVSSQFSQLTVFRLYSYFTV 716
+FL+ IR + L + DTV+++D D +P+N+ + + + Q ++ V +Y V
Sbjct: 1378 IFLLSIRAAGRGLNLQTADTVVIYDPDPNPKNEEQAVARAHRIGQTREVKV--IYMEAVV 1435
Query: 717 EE 718
E+
Sbjct: 1436 EK 1437
Score = 58.5 bits (140), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 68/136 (50%), Gaps = 10/136 (7%)
Query: 312 RVMKVILFILSLNHNVKRPFLIITTSSGLTVWETEFLHLAPSANLVVYKGNKDVRSCIRA 371
+VM +I +++ N P LII ++ L W++E PS + + Y G KD RS + +
Sbjct: 1015 QVMALIAYLMEFKGNYG-PHLIIVPNAVLVNWKSELHTWLPSVSCIYYVGTKDQRSKLFS 1073
Query: 372 LEFYNEDGGILFQILLSSSDIIVEDLHELRCISWEAIIIDECQRSKSLSHIDYIRTL--- 428
+ + F +L+++ + I+ D +L + W+ IIIDE QR K + R L
Sbjct: 1074 QVKFEK-----FNVLVTTYEFIMYDRSKLSKVDWKYIIIDEAQRMKDRESV-LARDLDRY 1127
Query: 429 AAEMRLLLVSGQIKED 444
+ RLLL ++ D
Sbjct: 1128 RCQRRLLLTGTPLQND 1143
>AT2G46020.2 | Symbols: CHR2, ATBRM, BRM, CHA2 | transcription
regulatory protein SNF2, putative |
chr2:18923304-18931769 FORWARD LENGTH=2193
Length = 2193
Score = 73.2 bits (178), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 93/182 (51%), Gaps = 17/182 (9%)
Query: 537 LRDLIISTRKCCNHPYLLDPSLHNFVTRGRPVEEHLNIGIKASGKLQLLERILFEARRRG 596
L + + RK CNHP L P ++F + +++ GKL +L+RIL + +R G
Sbjct: 1274 LNNRCMELRKACNHPLLNYPYFNDFSK---------DFLVRSCGKLWILDRILIKLQRTG 1324
Query: 597 LRVLIIFQSSDGSGSIGNILDDVLCQRFGQDCYVRYDRGYIKSKKQAALDTFNDKESGKF 656
RVL+ + + +IL++ L R + Y R D +++A+ FND ++ F
Sbjct: 1325 HRVLLFSTMT----KLLDILEEYLQWR--RLVYRRIDGTTSLEDRESAIVDFNDPDTDCF 1378
Query: 657 VFLMEIRDCLPSVKLSSVDTVILFDSDWDPQNDLRCLQKMSVSSQFSQLTVFRLYSYFTV 716
+FL+ IR + L + DTV+++D D +P+N+ + + + Q ++ V +Y V
Sbjct: 1379 IFLLSIRAAGRGLNLQTADTVVIYDPDPNPKNEEQAVARAHRIGQTREVKV--IYMEAVV 1436
Query: 717 EE 718
E+
Sbjct: 1437 EK 1438
Score = 62.4 bits (150), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 68/136 (50%), Gaps = 9/136 (6%)
Query: 312 RVMKVILFILSLNHNVKRPFLIITTSSGLTVWETEFLHLAPSANLVVYKGNKDVRSCIRA 371
+VM +I +++ N P LII ++ L W++E PS + + Y G KD RS +
Sbjct: 1015 QVMALIAYLMEFKGNYG-PHLIIVPNAVLVNWKSELHTWLPSVSCIYYVGTKDQRSKL-- 1071
Query: 372 LEFYNEDGGILFQILLSSSDIIVEDLHELRCISWEAIIIDECQRSKSLSHIDYIRTL--- 428
F E + F +L+++ + I+ D +L + W+ IIIDE QR K + R L
Sbjct: 1072 --FSQEVCAMKFNVLVTTYEFIMYDRSKLSKVDWKYIIIDEAQRMKDRESV-LARDLDRY 1128
Query: 429 AAEMRLLLVSGQIKED 444
+ RLLL ++ D
Sbjct: 1129 RCQRRLLLTGTPLQND 1144
>AT3G19210.2 | Symbols: RAD54 | homolog of RAD54 |
chr3:6652799-6658876 REVERSE LENGTH=908
Length = 908
Score = 72.0 bits (175), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 95/497 (19%), Positives = 191/497 (38%), Gaps = 84/497 (16%)
Query: 300 NALILEDQIDQERVMKVILFILSL------NHNVKRPFLIITTSSGLTVWETEFLHLAPS 353
N IL D + + ++ I + +L + + +I+T +S ++ WE E
Sbjct: 205 NGCILADDMGLGKTLQSITLLYTLLCQGFDGTPMVKKAIIVTPTSLVSNWEAEIKKWVGD 264
Query: 354 ANLVVYKGNKDVRSCIRALEFYNEDGGILFQILLSSSDIIVEDLHELRCISWEAIIIDEC 413
++ + ++ + L +++S + + S + +I DE
Sbjct: 265 RIQLIALCESTRDDVLSGIDSFTRPRSALQVLIISYETFRMHSSKFCQSESCDLLICDEA 324
Query: 414 QRSKSLSHID--YIRTLAAEMRLLLVSGQIKEDRADYIKLLSFLKSGHHRLNIAQMETYF 471
R K+ + + +L + R+LL ++ D ++ +++F G + A Y+
Sbjct: 325 HRLKNDQTLTNRALASLTCKRRVLLSGTPMQNDLEEFFAMVNFTNPGSLG-DAAHFRHYY 383
Query: 472 SASI--------------------SNLKSQLKQYVAYKCNSGSTRFVEHWVPAQLSNLQL 511
A I + L S++ Q++ + N+ + + +P ++ +
Sbjct: 384 EAPIICGREPTATEEEKNLAADRSAELSSKVNQFILRRTNA----LLSNHLPPKI----I 435
Query: 512 EQYCXXXXXXXXXXXXXXXXDTVDALRD---------LIISTRKCCNHPYLL-------D 555
E C AL D I + +K CNHP L+ +
Sbjct: 436 EVVCCKMTTLQTTYNGCLCMQLKRALADNAKQTKVLAYITALKKLCNHPKLIYDTIKSGN 495
Query: 556 PSLHNF----------VTRGRPVEEHLNIG--IKASGKLQLLERILFEARRRGLRVLIIF 603
P F + GR G ++ SGK+ +L R+L RR+ +++
Sbjct: 496 PGTVGFENCLEFFPAEMFSGRSGAWTGGDGAWVELSGKMHVLSRLLANLRRKTDDRIVLV 555
Query: 604 QSSDGSGSIGNILDDVLCQRFGQDC------YVRYDRGYIKSKKQAALDTFNDKESGKFV 657
+ + + F Q C ++R D SK+Q ++ ND +F
Sbjct: 556 SNYTQTLDL-----------FAQLCRERRYPFLRLDGSTTISKRQKLVNRLNDPTKDEFA 604
Query: 658 FLMEIRDCLPSVKLSSVDTVILFDSDWDPQNDLRCLQKMSVSSQFSQLTVFRLYSYFTVE 717
FL+ + + L + ++LFD DW+P ND + ++ Q ++ V+R S T+E
Sbjct: 605 FLLSSKAGGCGLNLIGANRLVLFDPDWNPANDKQAAARVWRDGQKKRVYVYRFLSTGTIE 664
Query: 718 EKVL--MLAKEGIRLTV 732
EKV ++KEG++ +
Sbjct: 665 EKVYQRQMSKEGLQKVI 681
>AT3G57300.2 | Symbols: INO80 | INO80 ortholog |
chr3:21199612-21207635 FORWARD LENGTH=1540
Length = 1540
Score = 70.9 bits (172), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 77/148 (52%), Gaps = 7/148 (4%)
Query: 579 SGKLQLLERILFEARRRGLRVLIIFQSSDGSGSIGNILDDVLCQRFGQDCYVRYDRGYIK 638
SGKLQ L+ +L R RVL+ Q + + NIL+D + R + Y+R D
Sbjct: 1238 SGKLQTLDILLKRLRAGNHRVLLFAQMT----KMLNILEDYMNYR--KYKYLRLDGSSTI 1291
Query: 639 SKKQAALDTFNDKESGKFVFLMEIRDCLPSVKLSSVDTVILFDSDWDPQNDLRCLQKMSV 698
++ + F + S FVFL+ R + L++ DTVI ++SDW+P DL+ + +
Sbjct: 1292 MDRRDMVRDFQHR-SDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHR 1350
Query: 699 SSQFSQLTVFRLYSYFTVEEKVLMLAKE 726
Q +TV+RL TVEEK+L A +
Sbjct: 1351 LGQTKDVTVYRLICKETVEEKILHRASQ 1378
>AT3G19210.1 | Symbols: ATRAD54, CHR25, RAD54 | homolog of RAD54 |
chr3:6652799-6658876 REVERSE LENGTH=910
Length = 910
Score = 70.9 bits (172), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 95/495 (19%), Positives = 188/495 (37%), Gaps = 78/495 (15%)
Query: 300 NALILEDQIDQERVMKVILFILSL------NHNVKRPFLIITTSSGLTVWETEFLHLAPS 353
N IL D + + ++ I + +L + + +I+T +S ++ WE E
Sbjct: 205 NGCILADDMGLGKTLQSITLLYTLLCQGFDGTPMVKKAIIVTPTSLVSNWEAEIKKWVGD 264
Query: 354 ANLVVYKGNKDVRSCIRALEFYNEDGGILFQILLSSSDIIVEDLHELRCISWEAIIIDEC 413
++ + ++ + L +++S + + S + +I DE
Sbjct: 265 RIQLIALCESTRDDVLSGIDSFTRPRSALQVLIISYETFRMHSSKFCQSESCDLLICDEA 324
Query: 414 QRSKSLSHID--YIRTLAAEMRLLLVSGQIKEDRADYIKLLSFLKSGHHRLNIAQMETYF 471
R K+ + + +L + R+LL ++ D ++ +++F G + A Y+
Sbjct: 325 HRLKNDQTLTNRALASLTCKRRVLLSGTPMQNDLEEFFAMVNFTNPGSLG-DAAHFRHYY 383
Query: 472 SASI--------------------SNLKSQLKQYVAYKCNSGSTRFVEHWVP-------A 504
A I + L S++ Q++ + N+ H P
Sbjct: 384 EAPIICGREPTATEEEKNLAADRSAELSSKVNQFILRRTNA---LLSNHLPPKIIEVVCC 440
Query: 505 QLSNLQLEQYCXXXXXXXXXXXXXXXXDTVDALRDLIISTRKCCNHPYLL-------DPS 557
+++ LQ Y L I + +K CNHP L+ +P
Sbjct: 441 KMTTLQSTLYNHFISSKNLKRALADNAKQTKVLA-YITALKKLCNHPKLIYDTIKSGNPG 499
Query: 558 LHNF----------VTRGRPVEEHLNIG--IKASGKLQLLERILFEARRRGLRVLIIFQS 605
F + GR G ++ SGK+ +L R+L RR+ +++ +
Sbjct: 500 TVGFENCLEFFPAEMFSGRSGAWTGGDGAWVELSGKMHVLSRLLANLRRKTDDRIVLVSN 559
Query: 606 SDGSGSIGNILDDVLCQRFGQDC------YVRYDRGYIKSKKQAALDTFNDKESGKFVFL 659
+ + F Q C ++R D SK+Q ++ ND +F FL
Sbjct: 560 YTQTLDL-----------FAQLCRERRYPFLRLDGSTTISKRQKLVNRLNDPTKDEFAFL 608
Query: 660 MEIRDCLPSVKLSSVDTVILFDSDWDPQNDLRCLQKMSVSSQFSQLTVFRLYSYFTVEEK 719
+ + + L + ++LFD DW+P ND + ++ Q ++ V+R S T+EEK
Sbjct: 609 LSSKAGGCGLNLIGANRLVLFDPDWNPANDKQAAARVWRDGQKKRVYVYRFLSTGTIEEK 668
Query: 720 VL--MLAKEGIRLTV 732
V ++KEG++ +
Sbjct: 669 VYQRQMSKEGLQKVI 683
>AT3G12810.1 | Symbols: PIE1, SRCAP, chr13 | SNF2 domain-containing
protein / helicase domain-containing protein |
chr3:4065636-4073992 FORWARD LENGTH=2055
Length = 2055
Score = 60.5 bits (145), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 69/149 (46%), Gaps = 11/149 (7%)
Query: 580 GKLQLLERILFEARRRGLRVLIIFQSSDGSGSIGNILD--DVLCQRFGQDCYVRYDRGYI 637
GKLQ L +L + + G R LI Q + +LD + +G Y+R D
Sbjct: 1075 GKLQELAMLLRKLKFGGHRALIFTQ-------MTKMLDVLEAFINLYGY-TYMRLDGSTP 1126
Query: 638 KSKKQAALDTFNDKESGKFVFLMEIRDCLPSVKLSSVDTVILFDSDWDPQNDLRCLQKMS 697
++Q + FN F+F++ R + L DTVI +DSDW+P D + +
Sbjct: 1127 PEERQTLMQRFN-TNPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCH 1185
Query: 698 VSSQFSQLTVFRLYSYFTVEEKVLMLAKE 726
Q ++ ++RL S T+EE +L A +
Sbjct: 1186 RIGQTREVHIYRLISESTIEENILKKANQ 1214
>AT2G02090.1 | Symbols: CHR19, CHA19, ETL1 | SNF2 domain-containing
protein / helicase domain-containing protein |
chr2:523481-526884 FORWARD LENGTH=763
Length = 763
Score = 58.2 bits (139), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 85/171 (49%), Gaps = 17/171 (9%)
Query: 563 TRGRPVEEHLNIGIKASGKLQLLERILFEARRRGLRVLIIFQSSDGSGSIGNILD---DV 619
T+G ++H+ + S K + L +L ++ G RVLI Q + S+ +IL+ DV
Sbjct: 575 TKGTLSDKHVML----SAKCRTLAELLPSMKKSGHRVLIFSQWT----SMLDILEWTLDV 626
Query: 620 LCQRFGQDCYVRYDRGYIKSKKQAALDTFNDKESGKFVFLMEIRDCLPSVKLSSVDTVIL 679
+ Y R D + +Q +DTFN+ +S F L+ R + L+ DTVI+
Sbjct: 627 IGV-----TYRRLDGSTQVTDRQTIVDTFNNDKS-IFACLLSTRAGGQGLNLTGADTVII 680
Query: 680 FDSDWDPQNDLRCLQKMSVSSQFSQLTVFRLYSYFTVEEKVLMLAKEGIRL 730
D D++PQ D + + Q +T+FRL + TV+E + +AK + L
Sbjct: 681 HDMDFNPQIDRQAEDRCHRIGQTKPVTIFRLVTKSTVDENIYEIAKRKLVL 731
>AT1G03750.1 | Symbols: CHR9 | switch 2 | chr1:937920-941068 FORWARD
LENGTH=862
Length = 862
Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 74/145 (51%), Gaps = 7/145 (4%)
Query: 576 IKASGKLQLLERILFEARRRGLRVLIIFQSSDGSGSIGNILDDVLCQRFGQDCYVRYDRG 635
+K GK++ LE+++ +G ++L+ S + +IL+ L ++ + R D
Sbjct: 524 VKHCGKMRALEKLMASWISKGDKILLFSYSV----RMLDILEKFLIRK--GYSFARLDGS 577
Query: 636 YIKSKKQAALDTFNDKESGKFVFLMEIRDCLPSVKLSSVDTVILFDSDWDPQNDLRCLQK 695
+ +Q+ +D FN S K VFL+ + + L S + V++FD +W+P +DL+ +
Sbjct: 578 TPTNLRQSLVDDFNASPS-KQVFLISTKAGGLGLNLVSANRVVIFDPNWNPSHDLQAQDR 636
Query: 696 MSVSSQFSQLTVFRLYSYFTVEEKV 720
Q + VFRL S ++EE V
Sbjct: 637 SFRYGQKRHVVVFRLLSAGSLEELV 661