Miyakogusa Predicted Gene

Lj1g3v4579500.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4579500.1 Non Chatacterized Hit- tr|A5C1G7|A5C1G7_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,60.76,1e-18,coiled-coil,NULL; seg,NULL; VACUOLAR ATP SYNTHASE
SUBUNIT G PLANT,NULL; VACUOLAR ATP SYNTHASE SUBUNI,CUFF.32763.1
         (110 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G01390.2 | Symbols: VMA10, AVMA10 | vacuolar membrane ATPase ...   122   4e-29
AT3G01390.1 | Symbols: VMA10, AVMA10 | vacuolar membrane ATPase ...   122   4e-29
AT4G23710.1 | Symbols: VHA-G2, VAG2, VATG2 | vacuolar ATP syntha...   122   5e-29
AT4G25950.1 | Symbols: VATG3 | vacuolar ATP synthase G3 | chr4:1...   107   1e-24

>AT3G01390.2 | Symbols: VMA10, AVMA10 | vacuolar membrane ATPase 10
           | chr3:150265-150922 REVERSE LENGTH=110
          Length = 110

 Score =  122 bits (307), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 73/110 (66%), Positives = 84/110 (76%)

Query: 1   MASNRGQGGIXXXXXXXXXXXRIVNAAKNEKLARLKQAKEEAEKDIAEYRAHLEHEFQKK 60
           M SNRGQG I            IVNAA+  K+ARLKQAKEEAEK+IAEY+A  E +FQ+K
Sbjct: 1   MESNRGQGSIQQLLAAEVEAQHIVNAARTAKMARLKQAKEEAEKEIAEYKAQTEQDFQRK 60

Query: 61  VSASSGDSGANVKRLEQETDAKIQHLKTEAGRISQDVVAMLLKYVTTVKN 110
           +  +SGDSGANVKRLEQETD KI+ LK EA RIS+DVV MLLK+VTTVKN
Sbjct: 61  LEETSGDSGANVKRLEQETDTKIEQLKNEASRISKDVVEMLLKHVTTVKN 110


>AT3G01390.1 | Symbols: VMA10, AVMA10 | vacuolar membrane ATPase 10
           | chr3:150265-150922 REVERSE LENGTH=110
          Length = 110

 Score =  122 bits (307), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 73/110 (66%), Positives = 84/110 (76%)

Query: 1   MASNRGQGGIXXXXXXXXXXXRIVNAAKNEKLARLKQAKEEAEKDIAEYRAHLEHEFQKK 60
           M SNRGQG I            IVNAA+  K+ARLKQAKEEAEK+IAEY+A  E +FQ+K
Sbjct: 1   MESNRGQGSIQQLLAAEVEAQHIVNAARTAKMARLKQAKEEAEKEIAEYKAQTEQDFQRK 60

Query: 61  VSASSGDSGANVKRLEQETDAKIQHLKTEAGRISQDVVAMLLKYVTTVKN 110
           +  +SGDSGANVKRLEQETD KI+ LK EA RIS+DVV MLLK+VTTVKN
Sbjct: 61  LEETSGDSGANVKRLEQETDTKIEQLKNEASRISKDVVEMLLKHVTTVKN 110


>AT4G23710.1 | Symbols: VHA-G2, VAG2, VATG2 | vacuolar ATP synthase
           subunit G2 | chr4:12350577-12351354 FORWARD LENGTH=106
          Length = 106

 Score =  122 bits (306), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 63/103 (61%), Positives = 75/103 (72%)

Query: 8   GGIXXXXXXXXXXXRIVNAAKNEKLARLKQAKEEAEKDIAEYRAHLEHEFQKKVSASSGD 67
            GI           +IVNAA+  K+ RLKQAKEEAE ++AE++   E  FQ+K+ A+SGD
Sbjct: 4   AGIQQLLAAEREAQQIVNAARTAKMTRLKQAKEEAETEVAEHKTSTEQGFQRKLEATSGD 63

Query: 68  SGANVKRLEQETDAKIQHLKTEAGRISQDVVAMLLKYVTTVKN 110
           SGANVKRLEQETDAKI+ LK EA RIS+DVV MLLK VTTV N
Sbjct: 64  SGANVKRLEQETDAKIEQLKNEATRISKDVVDMLLKNVTTVNN 106


>AT4G25950.1 | Symbols: VATG3 | vacuolar ATP synthase G3 |
           chr4:13173815-13174324 REVERSE LENGTH=108
          Length = 108

 Score =  107 bits (268), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 55/108 (50%), Positives = 75/108 (69%), Gaps = 2/108 (1%)

Query: 1   MASNRGQGGIXXXXXXXXXXXRIVNAAKNEKLARLKQAKEEAEKDIAEYRAHLEHEFQKK 60
           M S RGQGGI           RIV+AA+  KLAR+KQAK+EAEK++ EYR+ LE E+Q +
Sbjct: 1   MDSLRGQGGIQMLLTAEQEAGRIVSAARTAKLARMKQAKDEAEKEMEEYRSRLEEEYQTQ 60

Query: 61  VSASSGDSGANVKRLEQETDAKIQHLKTEAGRISQDVVAMLLKYVTTV 108
           VS +  D  A+ KRL+ ETD +I +LK  + ++S+D+V ML+KYVTT 
Sbjct: 61  VSGT--DQEADAKRLDDETDVRITNLKESSSKVSKDIVKMLIKYVTTT 106