Miyakogusa Predicted Gene

Lj1g3v4579390.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4579390.1 tr|D8TW33|D8TW33_VOLCA Qc-SNARE, SYP7-family
OS=Volvox carteri GN=syp71 PE=4
SV=1,46.88,0.0000000000008,T_SNARE,Target SNARE coiled-coil domain; no
description,NULL; seg,NULL; HYPOTHETICAL PROTEIN,NULL; S,CUFF.32738.1
         (265 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G09740.1 | Symbols: SYP71, ATSYP71 | syntaxin of plants 71 | ...   369   e-102
AT3G61450.2 | Symbols: SYP73 | syntaxin of plants 73 | chr3:2273...   304   4e-83
AT3G45280.1 | Symbols: SYP72, ATSYP72 | syntaxin of plants 72 | ...   294   4e-80
AT3G61450.1 | Symbols: SYP73, ATSYP73 | syntaxin of plants 73 | ...   291   2e-79

>AT3G09740.1 | Symbols: SYP71, ATSYP71 | syntaxin of plants 71 |
           chr3:2989615-2991354 FORWARD LENGTH=266
          Length = 266

 Score =  369 bits (946), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 181/266 (68%), Positives = 208/266 (78%), Gaps = 2/266 (0%)

Query: 1   MSVIDILTRVDSIVNXXXXXXXXXXXXSNVSGDDPFAKLYAAVDADIDAALQKAETASNG 60
           M+VIDILTRVDSI              +N+SGDD FA+LY A +  I+ AL+KAE  +  
Sbjct: 1   MTVIDILTRVDSICKKYDKYDVDKQREANISGDDAFARLYGAFETQIETALEKAELVTKE 60

Query: 61  KNRASTVAINAEIRRTKARLLDEVPKLQRLAVKKVKGLSSQEFAARNDLVLALPERIQAI 120
           KNRA+ VA+NAEIRRTKARL +EVPKLQRLAVK+VKGL+++E AARNDLVLALP RI+AI
Sbjct: 61  KNRAAAVAMNAEIRRTKARLSEEVPKLQRLAVKRVKGLTTEELAARNDLVLALPARIEAI 120

Query: 121 PDGTPAAPKQAGGWAASG--SRPEIKFDSNGRFDDEYFQQTEESSQFRQEYEMRKMKQDQ 178
           PDGT   PK    W  S   SRP+IKFDS+GRFDD+YFQ++ ESSQFRQEYEMRK+KQ+Q
Sbjct: 121 PDGTAGGPKSTSAWTPSSTTSRPDIKFDSDGRFDDDYFQESNESSQFRQEYEMRKIKQEQ 180

Query: 179 GLDVIAEGLDTLKNMAHDMNEEFDRQVPLMDEIDTKVDKASSDLKNTNVRLKHTVTQLRS 238
           GLD+I+EGLD LKNMA DMNEE DRQVPLMDEIDTKVD+A+SDLKNTNVRLK TV QLRS
Sbjct: 181 GLDMISEGLDALKNMASDMNEELDRQVPLMDEIDTKVDRATSDLKNTNVRLKDTVNQLRS 240

Query: 239 SRNFCXXXXXXXXXXXXAAYLYNVLK 264
           SRNFC            AAYLYNVLK
Sbjct: 241 SRNFCIDIVLLCIVLGIAAYLYNVLK 266


>AT3G61450.2 | Symbols: SYP73 | syntaxin of plants 73 |
           chr3:22738455-22739953 FORWARD LENGTH=264
          Length = 264

 Score =  304 bits (778), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 158/267 (59%), Positives = 196/267 (73%), Gaps = 6/267 (2%)

Query: 1   MSVIDILTRVDSIVNXXXXXXXXXXXXSNVSGDDPFAKLYAAVDADIDAALQKAETASNG 60
           M VID++TRVDSI              +NVSGDD F++LY+AV+  ++  LQK E  S+ 
Sbjct: 1   MGVIDLITRVDSICKKYEKYDINRQRDANVSGDDAFSRLYSAVEYALETVLQKTEDLSSE 60

Query: 61  KNRASTVAINAEIRRTKARLLDEVPKLQRLAVKKVKGLSSQEFAARNDLVLALPERIQAI 120
            N+A  VA+NAEIRRTKARLL+ +PKLQRL++KKVKGLS +E  ARNDLVL+L ++I+AI
Sbjct: 61  TNKAKAVAMNAEIRRTKARLLEGIPKLQRLSLKKVKGLSKEELDARNDLVLSLRDKIEAI 120

Query: 121 PDGTPAAPKQAGGWAASGSRPEIKFDSN---GRFDDEYFQQTEESSQFRQEYEMRKMKQD 177
           P+ +  AP   GGW AS S   I+FD+N    R   EYFQ T ES QF+QEYEM+++KQD
Sbjct: 121 PESS--AP-VVGGWEASTSYSNIRFDTNVSDDRIGSEYFQPTGESDQFKQEYEMKRIKQD 177

Query: 178 QGLDVIAEGLDTLKNMAHDMNEEFDRQVPLMDEIDTKVDKASSDLKNTNVRLKHTVTQLR 237
           QGLD IAEGLDTLKNMA D+NEE DRQ PLMDEIDTK+DKA++DLK+TNVRLK TVT+LR
Sbjct: 178 QGLDYIAEGLDTLKNMAQDINEELDRQEPLMDEIDTKIDKAATDLKSTNVRLKDTVTKLR 237

Query: 238 SSRNFCXXXXXXXXXXXXAAYLYNVLK 264
           SSRNFC            AA++YN +K
Sbjct: 238 SSRNFCIDIILLCILLGIAAFIYNSVK 264


>AT3G45280.1 | Symbols: SYP72, ATSYP72 | syntaxin of plants 72 |
           chr3:16611445-16613304 REVERSE LENGTH=267
          Length = 267

 Score =  294 bits (753), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 151/266 (56%), Positives = 189/266 (71%), Gaps = 3/266 (1%)

Query: 1   MSVIDILTRVDSIVNXXXXXXXXXXXXSNVSGDDPFAKLYAAVDADIDAALQKAETASNG 60
           M VIDI+ RVD I                 SGDD F++L+ ++D+DI+A L+KAE AS  
Sbjct: 1   MPVIDIIFRVDEICKKYDKYDIDKHREIGASGDDAFSRLFTSIDSDIEAVLRKAELASTE 60

Query: 61  KNRASTVAINAEIRRTKARLLDEVPKLQRLAVKKVKGLSSQEFAARNDLVLALPERIQAI 120
           KNRA+ VA+NAE+RRTKARL ++V KLQ+LAVKK+KGL+ +E  +R DLV+AL +R+QAI
Sbjct: 61  KNRAAAVAMNAEVRRTKARLAEDVVKLQKLAVKKIKGLTREERESRCDLVIALADRLQAI 120

Query: 121 PDGTPAAPKQAGG-WA-ASGSRPEIKFD-SNGRFDDEYFQQTEESSQFRQEYEMRKMKQD 177
           PDG     KQA   W  AS     IKFD S    DD +FQQ+EESSQFRQEYEMR+ KQD
Sbjct: 121 PDGNEHGAKQANSDWGGASAPNKNIKFDMSEEDMDDGFFQQSEESSQFRQEYEMRRKKQD 180

Query: 178 QGLDVIAEGLDTLKNMAHDMNEEFDRQVPLMDEIDTKVDKASSDLKNTNVRLKHTVTQLR 237
           +GLD+I+EGLD LKN+A DMNEE D+QVPLM+E++TKVD A+SDLKNTNVRLK  + Q+R
Sbjct: 181 EGLDIISEGLDALKNLARDMNEELDKQVPLMEEMETKVDGATSDLKNTNVRLKKQLVQMR 240

Query: 238 SSRNFCXXXXXXXXXXXXAAYLYNVL 263
           SSRNFC             +Y+YN L
Sbjct: 241 SSRNFCIDIILLCVILGIVSYIYNAL 266


>AT3G61450.1 | Symbols: SYP73, ATSYP73 | syntaxin of plants 73 |
           chr3:22738455-22739953 FORWARD LENGTH=263
          Length = 263

 Score =  291 bits (746), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 155/267 (58%), Positives = 194/267 (72%), Gaps = 7/267 (2%)

Query: 1   MSVIDILTRVDSIVNXXXXXXXXXXXXSNVSGDDPFAKLYAAVDADIDAALQKAETASNG 60
           M VID++TRVDSI              +NVSGDD F++LY+AV+  ++  LQK E  S+ 
Sbjct: 1   MGVIDLITRVDSICKKYEKYDINRQRDANVSGDDAFSRLYSAVEYALETVLQKTEDLSSE 60

Query: 61  KNRASTVAINAEIRRTKARLLDEVPKLQRLAVKKVKGLSSQEFAARNDLVLALPERIQAI 120
            N+A  VA+NAEIRRTKARLL+ +PKLQRL++KKVKGLS +E  ARNDLVL+L ++I+AI
Sbjct: 61  TNKAKAVAMNAEIRRTKARLLEGIPKLQRLSLKKVKGLSKEELDARNDLVLSLRDKIEAI 120

Query: 121 PDGTPAAPKQAGGWAASGSRPEIKFDSN---GRFDDEYFQQTEESSQFRQEYEMRKMKQD 177
           P+ +  AP   GGW AS S   I+FD+N    R   EYFQ T ES QF+QEYEM+++KQ 
Sbjct: 121 PESS--AP-VVGGWEASTSYSNIRFDTNVSDDRIGSEYFQPTGESDQFKQEYEMKRIKQA 177

Query: 178 QGLDVIAEGLDTLKNMAHDMNEEFDRQVPLMDEIDTKVDKASSDLKNTNVRLKHTVTQLR 237
           + LD IAEGLDTLKNMA D+NEE DRQ PLMDEIDTK+DKA++DLK+TNVRLK TVT+LR
Sbjct: 178 R-LDYIAEGLDTLKNMAQDINEELDRQEPLMDEIDTKIDKAATDLKSTNVRLKDTVTKLR 236

Query: 238 SSRNFCXXXXXXXXXXXXAAYLYNVLK 264
           SSRNFC            AA++YN +K
Sbjct: 237 SSRNFCIDIILLCILLGIAAFIYNSVK 263