Miyakogusa Predicted Gene

Lj1g3v4579230.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4579230.1 Non Chatacterized Hit- tr|Q6XD29|Q6XD29_GOSBA
Putative uncharacterized protein (Fragment)
OS=Gossypi,79.17,0.00000000002,SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL; PLAC8,Uncharacterised protein family Cys-rich;
seg,,CUFF.32730.1
         (234 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G37110.1 | Symbols:  | PLAC8 family protein | chr2:15592689-1...   303   5e-83
AT2G40935.1 | Symbols:  | PLAC8 family protein | chr2:17083199-1...    71   7e-13
AT2G40935.3 | Symbols:  | PLAC8 family protein | chr2:17083199-1...    58   6e-09
AT2G40935.2 | Symbols:  | PLAC8 family protein | chr2:17083336-1...    56   2e-08
AT1G68630.1 | Symbols:  | PLAC8 family protein | chr1:25768653-2...    51   6e-07
AT3G18450.1 | Symbols:  | PLAC8 family protein | chr3:6331229-63...    49   2e-06
AT3G18470.1 | Symbols:  | PLAC8 family protein | chr3:6335000-63...    48   5e-06

>AT2G37110.1 | Symbols:  | PLAC8 family protein |
           chr2:15592689-15593726 FORWARD LENGTH=242
          Length = 242

 Score =  303 bits (777), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 138/190 (72%), Positives = 158/190 (83%)

Query: 43  GWTADGHPVPHGSVVGQPMSRSPWNSSICACLGQNDDFCSSDLEVCLLGSVAPCVLYGSN 102
           GWTADG PV HGSV+G+P+ R+ WNS +  CLG+ND+FCSSDLEVCLLGSVAPCVLYG+N
Sbjct: 52  GWTADGLPVSHGSVIGEPIRRNQWNSGLFTCLGRNDEFCSSDLEVCLLGSVAPCVLYGTN 111

Query: 103 VERLGSTPGTFVNHCLPYSGLYVIGNSCFGWNCLAPLFSYPSRTALRRRFNLEGSCEALN 162
            ERLGS PGTF NHCL Y GLY +GNS FGWNCLAP FSY SR+A+RR+FNLEGS EA+N
Sbjct: 112 AERLGSAPGTFSNHCLTYLGLYFVGNSLFGWNCLAPWFSYSSRSAIRRKFNLEGSFEAMN 171

Query: 163 RSCGCCGSFMEDEAQREQCESACDLATHVFCHVCALCQEGRELRRRLPHPGFNAQPVLVM 222
           RSCGCCG  +EDE QRE  E+ CD  THV CH CALCQEGRELRR++ HPGFNAQ  +V+
Sbjct: 172 RSCGCCGGCIEDEMQREHLETTCDFVTHVLCHTCALCQEGRELRRKVLHPGFNAQSTVVV 231

Query: 223 IPPGEQAMGR 232
           +PP EQ MGR
Sbjct: 232 MPPIEQTMGR 241


>AT2G40935.1 | Symbols:  | PLAC8 family protein |
           chr2:17083199-17084216 FORWARD LENGTH=190
          Length = 190

 Score = 70.9 bits (172), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 56/193 (29%), Positives = 81/193 (41%), Gaps = 51/193 (26%)

Query: 28  PKAPPVPQSPQDFLLGWTADGHPVPHGSVVGQPMSRSP--WNSSICACLGQNDDFCSSDL 85
           P   P+ QS  D  +  T     +     V +     P  W+S ICAC          D+
Sbjct: 11  PSYIPLTQSDADTEVETTTPNLEI----AVSESTKDDPRQWSSGICACF--------DDM 58

Query: 86  EVCLLGSVAPCVLYGSNVERLGSTPGTFVNHCLPYSGLYVIGNS--CFGWN--------C 135
           + C +G   PC ++G N E LGS  GTF   CL +   + + N+  CF  N        C
Sbjct: 59  QSCCVGLFCPCYIFGKNAELLGS--GTFAGPCLTHCISWALVNTICCFATNGALLGLPGC 116

Query: 136 LAPLFSYPSRTALRRRFNLEGSCEALNRSCGCCGSFMEDEAQREQCESACDLATHVFCHV 195
               ++   R +LR ++NL+ +       CG                   D  TH FCH+
Sbjct: 117 FVSCYACGYRKSLRAKYNLQEA------PCG-------------------DFVTHFFCHL 151

Query: 196 CALCQEGRELRRR 208
           CA+CQE RE+R +
Sbjct: 152 CAICQEYREIREQ 164


>AT2G40935.3 | Symbols:  | PLAC8 family protein |
           chr2:17083199-17084216 FORWARD LENGTH=179
          Length = 179

 Score = 57.8 bits (138), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 40/129 (31%), Positives = 58/129 (44%), Gaps = 37/129 (28%)

Query: 90  LGSVAPCVLYGSNVERLGSTPGTFVNHCLPYSGLYVIGNS--CFGWN--------CLAPL 139
           +G   PC ++G N E LGS  GTF   CL +   + + N+  CF  N        C    
Sbjct: 52  VGLFCPCYIFGKNAELLGS--GTFAGPCLTHCISWALVNTICCFATNGALLGLPGCFVSC 109

Query: 140 FSYPSRTALRRRFNLEGSCEALNRSCGCCGSFMEDEAQREQCESACDLATHVFCHVCALC 199
           ++   R +LR ++NL+ +       CG                   D  TH FCH+CA+C
Sbjct: 110 YACGYRKSLRAKYNLQEA------PCG-------------------DFVTHFFCHLCAIC 144

Query: 200 QEGRELRRR 208
           QE RE+R +
Sbjct: 145 QEYREIREQ 153


>AT2G40935.2 | Symbols:  | PLAC8 family protein |
           chr2:17083336-17084216 FORWARD LENGTH=166
          Length = 166

 Score = 55.8 bits (133), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 40/129 (31%), Positives = 58/129 (44%), Gaps = 37/129 (28%)

Query: 90  LGSVAPCVLYGSNVERLGSTPGTFVNHCLPYSGLYVIGNS--CFGWN--------CLAPL 139
           +G   PC ++G N E LGS  GTF   CL +   + + N+  CF  N        C    
Sbjct: 39  VGLFCPCYIFGKNAELLGS--GTFAGPCLTHCISWALVNTICCFATNGALLGLPGCFVSC 96

Query: 140 FSYPSRTALRRRFNLEGSCEALNRSCGCCGSFMEDEAQREQCESACDLATHVFCHVCALC 199
           ++   R +LR ++NL+ +       CG                   D  TH FCH+CA+C
Sbjct: 97  YACGYRKSLRAKYNLQEA------PCG-------------------DFVTHFFCHLCAIC 131

Query: 200 QEGRELRRR 208
           QE RE+R +
Sbjct: 132 QEYREIREQ 140


>AT1G68630.1 | Symbols:  | PLAC8 family protein |
           chr1:25768653-25769458 FORWARD LENGTH=161
          Length = 161

 Score = 51.2 bits (121), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 41/149 (27%), Positives = 59/149 (39%), Gaps = 41/149 (27%)

Query: 66  WNSSICACLGQNDDFCSSDLEVCLLGSVAPCVLYGSNVERLGSTPGTFVNHCLPYSGLYV 125
           W + +C C          D  +C+  ++ PCV +  NVE +       +N  L +  L  
Sbjct: 29  WTTGLCDC--------HEDAHICVQTAIMPCVSFAQNVEIVNRGTIPCMNAGLIHLALGF 80

Query: 126 IGNSCFGWNCLAPLFSYPSRTALRRRFNLEGSCEALNRSCGCCGSFMEDEAQREQCESAC 185
           IG S   W     L+++P+R+ LR  F L                        E C    
Sbjct: 81  IGCS---W-----LYAFPNRSRLREHFALP----------------------EEPCR--- 107

Query: 186 DLATHVFCHVCALCQEGRELRRRLPHPGF 214
           D   H+FC  CA+CQE REL+ R   P  
Sbjct: 108 DFLVHLFCTPCAICQESRELKNRGADPSI 136


>AT3G18450.1 | Symbols:  | PLAC8 family protein |
           chr3:6331229-6332118 REVERSE LENGTH=184
          Length = 184

 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 52/195 (26%), Positives = 79/195 (40%), Gaps = 61/195 (31%)

Query: 51  VPHGSVVGQPMSRSPWNSSICACLGQNDDFCSSDLEVCLLGSVAPCVLYGSNVERL--GS 108
           +P G  V    +++ W+S +  C+        +D E  ++  +APCV +G   E +  G+
Sbjct: 37  IPTGIPVNYQQTQNQWSSQLFDCM--------NDSENAVITLIAPCVTFGQIAEIVDEGA 88

Query: 109 TPGTFVNHCLPYSGLYVIGNSCFGWNCLAPLFSYPSRTALRRRFNLEGSCEALNRSCGCC 168
           TP       L Y  L+  G S         ++SY  R  +R++F L  +           
Sbjct: 89  TPCATAG--LLYGALFFTGASF--------VYSYMFRARIRKKFGLPDA----------- 127

Query: 169 GSFMEDEAQREQCESACDLATHVFCHVCALCQEGRELRRRLPHPGFN-----------AQ 217
                          A D  TH+ C   ALCQE REL+    H GF+           AQ
Sbjct: 128 --------------PAPDWITHLVCMPFALCQEYRELK----HHGFDPILGWAGNVQQAQ 169

Query: 218 PVLVMIPP-GEQAMG 231
              +M PP G++ MG
Sbjct: 170 QQEMMTPPTGQRMMG 184


>AT3G18470.1 | Symbols:  | PLAC8 family protein |
           chr3:6335000-6335698 REVERSE LENGTH=133
          Length = 133

 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 46/154 (29%), Positives = 56/154 (36%), Gaps = 38/154 (24%)

Query: 81  CSSDLEVCLLGSVAPCVLYGSNVERLGSTPGTFVNHCLPYSGLY--VIGNSCFGWNCLAP 138
           C  D E   L    PCV +G  +  +     T    C  + GL   V+G  C        
Sbjct: 12  CMEDSETACLTCFCPCVTFG-RIADISDEGRTGCGRCGVFYGLICCVVGLPC-------- 62

Query: 139 LFSYPSRTALRRRFNLEGSCEALNRSCGCCGSFMEDEAQREQCESACDLATHVFCHVCAL 198
           LFS   RT +R +F L  S                            D  TH FC  CAL
Sbjct: 63  LFSCTYRTKIRSKFGLPES-------------------------PTSDCVTHFFCECCAL 97

Query: 199 CQEGRELRRR--LPHPGFNAQPVLVMIPPGEQAM 230
           CQE REL+ R   P  G++      M PP  Q M
Sbjct: 98  CQEHRELKTRGLDPSIGWSGNMQRTMAPPMSQQM 131