Miyakogusa Predicted Gene
- Lj1g3v4579150.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v4579150.1 Non Chatacterized Hit- tr|I1JPJ8|I1JPJ8_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,76.19,0,PPR,Pentatricopeptide repeat; no
description,Tetratricopeptide-like helical; PPR: pentatricopeptide
,gene.g36871.t1.1
(609 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 747 0.0
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 407 e-113
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 404 e-113
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 399 e-111
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 395 e-110
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 392 e-109
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 384 e-106
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 384 e-106
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 383 e-106
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 380 e-105
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 377 e-104
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 376 e-104
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 376 e-104
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 376 e-104
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 375 e-104
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 375 e-104
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 372 e-103
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 371 e-103
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 369 e-102
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 368 e-102
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 368 e-102
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 368 e-102
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 367 e-101
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 365 e-101
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 364 e-101
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 363 e-100
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 363 e-100
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 362 e-100
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 360 2e-99
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 358 6e-99
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 357 9e-99
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 357 2e-98
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 356 2e-98
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 356 3e-98
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 355 4e-98
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 353 2e-97
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 351 8e-97
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 350 2e-96
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 349 3e-96
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 349 4e-96
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 349 4e-96
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 348 7e-96
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 347 9e-96
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 347 1e-95
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 347 1e-95
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 346 3e-95
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 344 1e-94
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 343 2e-94
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 343 2e-94
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 341 7e-94
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 341 7e-94
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 341 8e-94
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 341 9e-94
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 336 3e-92
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 335 4e-92
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 335 6e-92
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 335 6e-92
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 333 2e-91
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 333 2e-91
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 332 4e-91
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 332 7e-91
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 331 7e-91
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 330 1e-90
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 329 3e-90
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 329 4e-90
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 327 2e-89
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 327 2e-89
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 327 2e-89
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 325 6e-89
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 322 3e-88
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 318 5e-87
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 317 2e-86
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 316 3e-86
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 315 5e-86
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 314 9e-86
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 311 1e-84
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 311 1e-84
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 307 1e-83
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 307 2e-83
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 306 2e-83
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 306 2e-83
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 306 3e-83
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 303 2e-82
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 303 2e-82
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 303 3e-82
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 301 1e-81
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 301 1e-81
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 298 1e-80
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 296 3e-80
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 295 6e-80
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 295 7e-80
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 294 1e-79
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 294 1e-79
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 291 1e-78
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 291 1e-78
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 290 3e-78
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 286 2e-77
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 285 5e-77
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 285 5e-77
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 285 8e-77
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 285 1e-76
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 284 1e-76
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 283 3e-76
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 281 8e-76
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 281 8e-76
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 281 1e-75
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 280 2e-75
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 280 3e-75
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 278 6e-75
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 277 1e-74
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 276 2e-74
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 275 8e-74
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 273 2e-73
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 273 3e-73
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 273 3e-73
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 272 5e-73
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 271 7e-73
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 271 7e-73
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 271 1e-72
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 270 2e-72
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 268 6e-72
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 268 7e-72
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 268 8e-72
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 268 8e-72
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 267 2e-71
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 266 2e-71
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 266 3e-71
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 266 4e-71
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 265 9e-71
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 265 1e-70
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 264 2e-70
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 263 3e-70
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 263 3e-70
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 262 6e-70
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 260 2e-69
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 258 6e-69
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 258 9e-69
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 258 1e-68
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 256 3e-68
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 256 5e-68
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 254 8e-68
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 254 9e-68
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 253 2e-67
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 253 3e-67
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 253 4e-67
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 252 5e-67
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 252 5e-67
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 252 6e-67
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 251 1e-66
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 250 2e-66
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 249 3e-66
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 248 8e-66
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 247 1e-65
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 247 2e-65
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 246 4e-65
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 245 8e-65
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 244 9e-65
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 243 3e-64
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 242 4e-64
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 242 5e-64
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 240 3e-63
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 239 3e-63
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 239 4e-63
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 236 3e-62
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 236 5e-62
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 235 5e-62
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 234 1e-61
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 234 1e-61
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 234 2e-61
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 234 2e-61
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 233 4e-61
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 229 6e-60
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 227 2e-59
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 226 4e-59
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 226 4e-59
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 226 5e-59
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 226 5e-59
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 225 7e-59
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 224 2e-58
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 223 2e-58
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 223 3e-58
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 223 3e-58
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 219 3e-57
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 219 5e-57
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 219 5e-57
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 218 7e-57
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 218 1e-56
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 218 1e-56
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 217 2e-56
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 216 3e-56
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 216 4e-56
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 211 9e-55
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 211 9e-55
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 210 3e-54
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 209 4e-54
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 209 6e-54
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 200 2e-51
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 197 2e-50
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 191 1e-48
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 184 1e-46
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 168 8e-42
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 144 2e-34
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 134 2e-31
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 133 4e-31
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 131 1e-30
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 129 7e-30
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 127 3e-29
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 125 1e-28
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 2e-28
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 124 2e-28
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 121 1e-27
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 121 1e-27
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 121 2e-27
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 2e-27
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 120 2e-27
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 119 8e-27
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 119 8e-27
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 118 1e-26
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 117 2e-26
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 2e-26
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 3e-26
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 117 3e-26
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 7e-26
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 8e-26
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 9e-26
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 1e-25
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 5e-25
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 112 7e-25
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 8e-25
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 8e-25
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 8e-25
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 112 9e-25
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 112 9e-25
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 112 1e-24
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 111 1e-24
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 1e-24
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 109 5e-24
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 6e-24
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 6e-24
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 109 6e-24
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 1e-23
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 108 1e-23
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 108 2e-23
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 107 2e-23
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 107 2e-23
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 3e-23
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 3e-23
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 107 3e-23
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 106 4e-23
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 7e-23
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 9e-23
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 1e-22
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 1e-22
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 104 2e-22
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 2e-22
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 2e-22
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 103 3e-22
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 5e-22
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 7e-22
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 1e-21
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 2e-21
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 100 3e-21
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 100 3e-21
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 4e-21
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 100 4e-21
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 99 7e-21
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 1e-20
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 4e-20
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 97 4e-20
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 96 5e-20
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 1e-19
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 1e-19
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 1e-19
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 5e-19
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 6e-19
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 7e-19
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 92 8e-19
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 1e-18
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 92 1e-18
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 92 1e-18
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 2e-18
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 3e-18
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 3e-18
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 3e-18
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 3e-18
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 4e-18
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 90 5e-18
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 89 6e-18
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 89 7e-18
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 8e-18
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 9e-18
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 9e-18
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 1e-17
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 89 1e-17
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 2e-17
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 2e-17
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 3e-17
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 4e-17
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 6e-17
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 6e-17
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 6e-17
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 6e-17
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 7e-17
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 9e-17
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 85 2e-16
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 3e-15
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 81 3e-15
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 80 3e-15
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 4e-15
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 4e-15
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 80 5e-15
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 6e-15
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 6e-15
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 6e-15
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 6e-15
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 79 8e-15
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 8e-15
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 2e-14
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 2e-14
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 77 3e-14
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 5e-14
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 7e-14
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 76 8e-14
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 75 1e-13
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 75 1e-13
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 74 2e-13
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 4e-13
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 74 4e-13
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 5e-13
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 73 6e-13
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 73 7e-13
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 72 1e-12
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 70 5e-12
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 5e-12
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 5e-12
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 69 1e-11
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 68 2e-11
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 68 2e-11
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 67 4e-11
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 5e-11
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 6e-11
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 7e-11
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 9e-11
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 9e-11
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 4e-10
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 5e-10
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 6e-10
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 8e-10
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 2e-09
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 60 3e-09
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 59 8e-09
AT1G76280.3 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 57 4e-08
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 57 6e-08
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR) repeat-... 55 1e-07
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 55 1e-07
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 4e-07
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 4e-07
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 5e-07
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 7e-07
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 8e-07
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 8e-07
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 8e-07
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 9e-07
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 3e-06
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 51 3e-06
AT1G76280.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 3e-06
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 3e-06
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 6e-06
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 7e-06
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 747 bits (1929), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/589 (60%), Positives = 450/589 (76%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
MYGKCGS++DAR+VFD M RN+VS+TS+I+GYSQNGQG EA+ +Y++ML+ PDQ
Sbjct: 111 MYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFA 170
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMIS 120
FGSIIKAC + D+ LG+QLHA VIK HL+AQN LI+MY F Q++ AS VF I
Sbjct: 171 FGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIP 230
Query: 121 IKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGR 180
+KDLISWSS+I GF+QLG+E EAL ++ML GV+ PNE++ GS ACSSLL P+YG
Sbjct: 231 MKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGS 290
Query: 181 QIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSG 240
QIHG+C K L N +GCSLCDMYA+CGFL SA+ F QIE PD SWN IIA A++G
Sbjct: 291 QIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNG 350
Query: 241 DANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYN 300
A+EA+S+F QM G IPD+I+ SLLCA T PMAL+QGMQIHSYI+K GF ++ + N
Sbjct: 351 YADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCN 410
Query: 301 SLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENK 360
SLLTMYT CS+L+ ++FE NA+ VSWN IL+ACLQH+Q E RLFK ML SE +
Sbjct: 411 SLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECE 470
Query: 361 PNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRV 420
P+ IT+ NLL C E++SL++G+QVHC+S+K+GL + + NGLIDMYAKCGS+ A+R+
Sbjct: 471 PDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRI 530
Query: 421 FDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLV 480
FDS +N +V+SWS+LIVGYA SG G EAL LF++M++ G+ PN VT+VGVL+ACSH+GLV
Sbjct: 531 FDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLV 590
Query: 481 EEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTLLS 540
EEG LY TM+ E GI P +EH SC+VDLLARAG L EAE FI + +PD+ WKTLLS
Sbjct: 591 EEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLS 650
Query: 541 SCKTHGNVDIAERAAENILKLDPSNSAALVLLSSIHASAGNWEDVAKLR 589
+CKT GNV +A++AAENILK+DP NS A VLL S+HAS+GNWE+ A LR
Sbjct: 651 ACKTQGNVHLAQKAAENILKIDPFNSTAHVLLCSMHASSGNWENAALLR 699
Score = 213 bits (542), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 138/482 (28%), Positives = 243/482 (50%), Gaps = 6/482 (1%)
Query: 60 TFGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMI 119
T+ S+I AC + + GR++H H++ S + N ++SMY G + A +VF +
Sbjct: 69 TYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFM 128
Query: 120 SIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYG 179
++L+S++S+I G++Q G EA+ L+ ML++ + P++F GS+ AC+S + G
Sbjct: 129 PERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLV-PDQFAFGSIIKACASSSDVGLG 187
Query: 180 RQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADS 239
+Q+H K ++ + +L MY + + A FY I DL+SW++IIA F+
Sbjct: 188 KQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQL 247
Query: 240 GDANEAISIFRQMMHIGLI-PDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVAL 298
G EA+S ++M+ G+ P+ F S L AC+S + + G QIH +K
Sbjct: 248 GFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIA 307
Query: 299 YNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSE 358
SL MY +C L+ A VF+ I + + SWN I++ + A E +F QM S
Sbjct: 308 GCSLCDMYARCGFLNSARRVFDQIER-PDTASWNVIIAGLANNGYADEAVSVFSQMRSSG 366
Query: 359 NKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQ 418
P+ I++ +LL + +L G Q+H + +K G + D++V N L+ MY C +
Sbjct: 367 FIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCF 426
Query: 419 RVF-DSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHI 477
+F D N + +SW++++ E L LF+ M P+ +T +L C I
Sbjct: 427 NLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEI 486
Query: 478 GLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKT 537
++ G ++ + G+ P + + ++D+ A+ G L +A + D+ +W T
Sbjct: 487 SSLKLGSQVH-CYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMD-NRDVVSWST 544
Query: 538 LL 539
L+
Sbjct: 545 LI 546
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 117/439 (26%), Positives = 208/439 (47%), Gaps = 5/439 (1%)
Query: 108 QVAHASDVFTMISIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVF 167
Q+ S V + I ++L++ I + + EAL F + ++ S+
Sbjct: 17 QILATSSVVSTIKTEELMN--DHINSLCKSNFYREALEAFDFAQKNSSFKIRLRTYISLI 74
Query: 168 SACSSLLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLV 227
ACSS GR+IH + + MY KCG L A+ F + +LV
Sbjct: 75 CACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLV 134
Query: 228 SWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYI 287
S+ ++I ++ +G EAI ++ +M+ L+PD F S++ AC S + G Q+H+ +
Sbjct: 135 SYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQV 194
Query: 288 VKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGET 347
+K+ + + N+L+ MY + + + DA VF I +L+SW++I++ Q E
Sbjct: 195 IKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMK-DLISWSSIIAGFSQLGFEFEA 253
Query: 348 FRLFKQML-FSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLID 406
K+ML F PN + L C+ L + G+Q+H +KS L + L D
Sbjct: 254 LSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCD 313
Query: 407 MYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVT 466
MYA+CG + A+RVFD E P+ SW+ +I G A +G EA+++F +MR+ G P+ ++
Sbjct: 314 MYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAIS 373
Query: 467 YVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKT 526
+L A + + +G +++ + + G + ++ + LY
Sbjct: 374 LRSLLCAQTKPMALSQGMQIHSYI-IKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDF 432
Query: 527 GFDPDITTWKTLLSSCKTH 545
+ D +W T+L++C H
Sbjct: 433 RNNADSVSWNTILTACLQH 451
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2761195-2764281 REVERSE
LENGTH=1028
Length = 1028
Score = 407 bits (1045), Expect = e-113, Method: Compositional matrix adjust.
Identities = 218/596 (36%), Positives = 335/596 (56%), Gaps = 4/596 (0%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
MY KC M+ A +VF+A+ +N V W +MI GY+ NG+ ++ + +++ M SG+ D T
Sbjct: 371 MYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFT 430
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMIS 120
F S++ C + D+ +G Q H+ +IK +L N L+ MY G + A +F +
Sbjct: 431 FTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMC 490
Query: 121 IKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGR 180
+D ++W+++I + Q E EA LF+ M G+ L S AC+ + G+
Sbjct: 491 DRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGA-CLASTLKACTHVHGLYQGK 549
Query: 181 QIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSG 240
Q+H + K GL R++ +G SL DMY+KCG + A+ F + +VS NA+IA ++ +
Sbjct: 550 QVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQN- 608
Query: 241 DANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVA-LY 299
+ EA+ +F++M+ G+ P ITF +++ AC P +L G Q H I K GF+ E L
Sbjct: 609 NLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLG 668
Query: 300 NSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSEN 359
SLL MY + +A ++F +S ++V W ++S Q+ E + +K+M
Sbjct: 669 ISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGV 728
Query: 360 KPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQR 419
P+ T +L C+ L+SL G +H LD SN LIDMYAKCG + + +
Sbjct: 729 LPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQ 788
Query: 420 VFDS-TENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIG 478
VFD NV+SW+SLI GYA +G +AL +F MR + P+E+T++GVL+ACSH G
Sbjct: 789 VFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAG 848
Query: 479 LVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTL 538
V +G ++ M + GI +H +CMVDLL R G L EA+ FI PD W +L
Sbjct: 849 KVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSL 908
Query: 539 LSSCKTHGNVDIAERAAENILKLDPSNSAALVLLSSIHASAGNWEDVAKLRKVLDD 594
L +C+ HG+ E +AE +++L+P NS+A VLLS+I+AS G WE LRKV+ D
Sbjct: 909 LGACRIHGDDIRGEISAEKLIELEPQNSSAYVLLSNIYASQGCWEKANALRKVMRD 964
Score = 271 bits (694), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 168/562 (29%), Positives = 292/562 (51%), Gaps = 13/562 (2%)
Query: 2 YGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTF 61
Y + G +KDAR +F M +VV+W MISG+ + G A+ + M +S + T
Sbjct: 271 YIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTL 330
Query: 62 GSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISI 121
GS++ A I ++ LG +HA IK G ++ + L+SMY+ ++ A+ VF +
Sbjct: 331 GSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEE 390
Query: 122 KDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQ 181
K+ + W++MIRG+ G + + LF DM G Y ++F S+ S C++ + E G Q
Sbjct: 391 KNDVFWNAMIRGYAHNGESHKVMELFMDMKSSG-YNIDDFTFTSLLSTCAASHDLEMGSQ 449
Query: 182 IHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGD 241
H I K L +N+F G +L DMYAKCG L A+ F ++ D V+WN II ++ +
Sbjct: 450 FHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDEN 509
Query: 242 ANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNS 301
+EA +F++M G++ D S L ACT L QG Q+H VK G ++++ +S
Sbjct: 510 ESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSS 569
Query: 302 LLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKP 361
L+ MY+KC + DA VF ++ + ++VS NA+++ Q+ E LF++ML P
Sbjct: 570 LIDMYSKCGIIKDARKVFSSLPE-WSVVSMNALIAGYSQNNLE-EAVVLFQEMLTRGVNP 627
Query: 362 NMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVS-VSNGLIDMYAKCGSVIHAQRV 420
+ IT ++ C + SL +G Q H K G + + L+ MY + A +
Sbjct: 628 SEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACAL 687
Query: 421 FDSTENP-NVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGL 479
F +P +++ W+ ++ G++ +G EAL +++MR+ GV P++ T+V VL CS +
Sbjct: 688 FSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSS 747
Query: 480 VEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTLL 539
+ EG +++ + L + ++D+ A+ G + + + ++ +W +L+
Sbjct: 748 LREGRAIHSLI-FHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLI 806
Query: 540 SSCKTHGNVDIAERAAENILKL 561
+ +G AE+ LK+
Sbjct: 807 NGYAKNG-------YAEDALKI 821
Score = 267 bits (682), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 158/474 (33%), Positives = 240/474 (50%), Gaps = 38/474 (8%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
MY KC + DAR+VF+ + N V WT + SGY + G EAV+++ +M G PD L
Sbjct: 204 MYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLA 263
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMIS 120
F ++I Y G++ A +F +S
Sbjct: 264 FVTVINT-----------------------------------YIRLGKLKDARLLFGEMS 288
Query: 121 IKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGR 180
D+++W+ MI G + G E A+ F +M R+ + LGSV SA + + G
Sbjct: 289 SPDVVAWNVMISGHGKRGCETVAIEYFFNM-RKSSVKSTRSTLGSVLSAIGIVANLDLGL 347
Query: 181 QIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSG 240
+H K GL N++ G SL MY+KC + +A F +E + V WNA+I +A +G
Sbjct: 348 VVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNG 407
Query: 241 DANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYN 300
++++ + +F M G D TF SLL C + L G Q HS I+K K + + N
Sbjct: 408 ESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGN 467
Query: 301 SLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENK 360
+L+ MY KC L DA +FE + N V+WN I+ + +Q + E F LFK+M
Sbjct: 468 ALVDMYAKCGALEDARQIFERMCDRDN-VTWNTIIGSYVQDENESEAFDLFKRMNLCGIV 526
Query: 361 PNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRV 420
+ + + L C + L G QVHC SVK GL D+ + LIDMY+KCG + A++V
Sbjct: 527 SDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKV 586
Query: 421 FDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSAC 474
F S +V+S ++LI GY+ + L EA+ LF++M GV P+E+T+ ++ AC
Sbjct: 587 FSSLPEWSVVSMNALIAGYSQNNL-EEAVVLFQEMLTRGVNPSEITFATIVEAC 639
Score = 223 bits (569), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 134/520 (25%), Positives = 249/520 (47%), Gaps = 39/520 (7%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
+Y KC + A + FD + ++V +W SM+S YS G+ + + ++ + + FP++ T
Sbjct: 104 LYAKCAQVSYAEKQFDFLE-KDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFT 162
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMIS 120
F ++ C ++ GRQ+H +IK G + L+ MY +++ A VF I
Sbjct: 163 FSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIV 222
Query: 121 IKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGR 180
+ + W+ + G+ + G EA+ +F M +G ++P+ +V +
Sbjct: 223 DPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEG-HRPDHLAFVTVINT----------- 270
Query: 181 QIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSG 240
Y + G L A+ F ++ SPD+V+WN +I+ G
Sbjct: 271 ------------------------YIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRG 306
Query: 241 DANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYN 300
AI F M + T S+L A L+ G+ +H+ +K+G + + +
Sbjct: 307 CETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGS 366
Query: 301 SLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENK 360
SL++MY+KC + A VFEA+ + N V WNA++ + ++ + LF M S
Sbjct: 367 SLVSMYSKCEKMEAAAKVFEALEEK-NDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYN 425
Query: 361 PNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRV 420
+ T T+LL TCA LE+G+Q H +K L ++ V N L+DMYAKCG++ A+++
Sbjct: 426 IDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQI 485
Query: 421 FDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLV 480
F+ + + ++W+++I Y EA +LF++M G+ + L AC+H+ +
Sbjct: 486 FERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGL 545
Query: 481 EEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAE 520
+G ++ + + G+ S ++D+ ++ G + +A
Sbjct: 546 YQGKQVH-CLSVKCGLDRDLHTGSSLIDMYSKCGIIKDAR 584
Score = 191 bits (486), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 129/492 (26%), Positives = 233/492 (47%), Gaps = 50/492 (10%)
Query: 54 FFPDQLTFGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHAS 113
F + F + + +A + +G+ +H+ + G N ++ +Y QV++A
Sbjct: 58 LFKSRKVFDEMPQRLALA--LRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAE 115
Query: 114 DVFTMISIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSL 173
F + KD+ +W+SM+ ++ +G + L F + ++ PN+F V S C+
Sbjct: 116 KQFDFLE-KDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIF-PNKFTFSIVLSTCARE 173
Query: 174 LEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAII 233
E+GRQIH K GL RN + G +L DMYAKC + A+ F I P+ V W +
Sbjct: 174 TNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLF 233
Query: 234 AAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFN 293
+ + +G EA+ +F +M G PD + F+
Sbjct: 234 SGYVKAGLPEEAVLVFERMRDEGHRPDHLAFV---------------------------- 265
Query: 294 KEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRL--F 351
+++ Y + L DA +F +S + ++V+WN ++S K+ ET + F
Sbjct: 266 -------TVINTYIRLGKLKDARLLFGEMS-SPDVVAWNVMISG--HGKRGCETVAIEYF 315
Query: 352 KQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKC 411
M S K T+ ++L +A+L++G VH ++K GL ++ V + L+ MY+KC
Sbjct: 316 FNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKC 375
Query: 412 GSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVL 471
+ A +VF++ E N + W+++I GYA +G H+ + LF M++ G ++ T+ +L
Sbjct: 376 EKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLL 435
Query: 472 SACSHIGLVEEGWNLYNTMEEELGIPPAREHF--SCMVDLLARAGCLYEAETFIRKTGFD 529
S C+ +E G ++ + + A+ F + +VD+ A+ G L +A + D
Sbjct: 436 STCAASHDLEMGSQFHSII---IKKKLAKNLFVGNALVDMYAKCGALEDARQIFERM-CD 491
Query: 530 PDITTWKTLLSS 541
D TW T++ S
Sbjct: 492 RDNVTWNTIIGS 503
Score = 142 bits (357), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 94/327 (28%), Positives = 166/327 (50%), Gaps = 11/327 (3%)
Query: 275 MALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAI 334
+AL G +HS + +G + E L N+++ +Y KC+ + A F+ + K+ + +WN++
Sbjct: 74 LALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLEKD--VTAWNSM 131
Query: 335 LSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGL 394
LS + G+ R F + ++ PN T + +L TCA ++E G Q+HC +K GL
Sbjct: 132 LSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGL 191
Query: 395 VLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRK 454
+ L+DMYAKC + A+RVF+ +PN + W+ L GY +GL EA+ +F +
Sbjct: 192 ERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFER 251
Query: 455 MRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAG 514
MR+ G RP+ + +V V++ +G +++ L+ M P ++ M+ + G
Sbjct: 252 MRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMS-----SPDVVAWNVMISGHGKRG 306
Query: 515 CLYEA-ETF--IRKTGFDPDITTWKTLLSSCKTHGNVDIAERAAENILKLD-PSNSAALV 570
C A E F +RK+ +T ++LS+ N+D+ +KL SN
Sbjct: 307 CETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGS 366
Query: 571 LLSSIHASAGNWEDVAKLRKVLDDGYD 597
L S+++ E AK+ + L++ D
Sbjct: 367 SLVSMYSKCEKMEAAAKVFEALEEKND 393
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 404 bits (1038), Expect = e-113, Method: Compositional matrix adjust.
Identities = 205/592 (34%), Positives = 340/592 (57%), Gaps = 5/592 (0%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
MY CG +K+A +VFD + + + W +++ +++G + ++ ++ +M+ SG D T
Sbjct: 138 MYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYT 197
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMIS 120
F + K+ ++ G QLH ++KSGFG N L++ Y +V A VF ++
Sbjct: 198 FSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMT 257
Query: 121 IKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGR 180
+D+ISW+S+I G+ G + L +F ML G+ + + + SVF+ C+ GR
Sbjct: 258 ERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGI-EIDLATIVSVFAGCADSRLISLGR 316
Query: 181 QIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSG 240
+H I K R +L DMY+KCG L SAK F ++ +VS+ ++IA +A G
Sbjct: 317 AVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREG 376
Query: 241 DANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYN 300
A EA+ +F +M G+ PD T ++L C L++G ++H +I + ++ + N
Sbjct: 377 LAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSN 436
Query: 301 SLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENK 360
+L+ MY KC ++ +A VF + + +++SWN I+ ++ A E LF +L E +
Sbjct: 437 ALMDMYAKCGSMQEAELVFSEM-RVKDIISWNTIIGGYSKNCYANEALSLF-NLLLEEKR 494
Query: 361 --PNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQ 418
P+ T+ +L CA L++ + G ++H + +++G D V+N L+DMYAKCG+++ A
Sbjct: 495 FSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAH 554
Query: 419 RVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIG 478
+FD + +++SW+ +I GY M G G EA+ LF +MR G+ +E+++V +L ACSH G
Sbjct: 555 MLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSG 614
Query: 479 LVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTL 538
LV+EGW +N M E I P EH++C+VD+LAR G L +A FI PD T W L
Sbjct: 615 LVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGAL 674
Query: 539 LSSCKTHGNVDIAERAAENILKLDPSNSAALVLLSSIHASAGNWEDVAKLRK 590
L C+ H +V +AE+ AE + +L+P N+ VL+++I+A A WE V +LRK
Sbjct: 675 LCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRK 726
Score = 189 bits (479), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 114/387 (29%), Positives = 205/387 (52%), Gaps = 5/387 (1%)
Query: 154 GVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPS 213
G + + L SV C+ + G+++ G V + G L MY CG L
Sbjct: 88 GKWDIDPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKE 147
Query: 214 AKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTS 273
A F +++ + WN ++ A SGD + +I +F++MM G+ DS TF + + +S
Sbjct: 148 ASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSS 207
Query: 274 PMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNA 333
+++ G Q+H +I+K GF + ++ NSL+ Y K + A VF+ +++ +++SWN+
Sbjct: 208 LRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTER-DVISWNS 266
Query: 334 ILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSG 393
I++ + + A + +F QML S + ++ TI ++ CA+ + +G VH VK+
Sbjct: 267 IINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKAC 326
Query: 394 LVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFR 453
+ N L+DMY+KCG + A+ VF + +V+S++S+I GYA GL EA+ LF
Sbjct: 327 FSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFE 386
Query: 454 KMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEE-ELGIPPAREHFSCMVDLLAR 512
+M G+ P+ T VL+ C+ L++EG ++ ++E +LG + ++D+ A+
Sbjct: 387 EMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSN--ALMDMYAK 444
Query: 513 AGCLYEAETFIRKTGFDPDITTWKTLL 539
G + EAE + DI +W T++
Sbjct: 445 CGSMQEAELVFSEMRV-KDIISWNTII 470
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 399 bits (1024), Expect = e-111, Method: Compositional matrix adjust.
Identities = 221/604 (36%), Positives = 343/604 (56%), Gaps = 14/604 (2%)
Query: 1 MYGKCGSMKDARQVFDAMHL---RNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPD 57
+Y K G A VF+ M R+VVSW++M++ Y NG+ +A+ ++++ L G P+
Sbjct: 106 LYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPN 165
Query: 58 QLTFGSIIKACCIAGDIYLGRQLHAHVIKSG-FGGHLVAQNGLISMYTN-FGQVAHASDV 115
+ ++I+AC + + +GR ++K+G F + LI M+ +A V
Sbjct: 166 DYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKV 225
Query: 116 FTMISIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLE 175
F +S ++++W+ MI Q+G+ EA+ F DM+ G ++ ++F L SVFSAC+ L
Sbjct: 226 FDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSG-FESDKFTLSSVFSACAELEN 284
Query: 176 PEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKC---GFLPSAKTAFYQIESPDLVSWNAI 232
G+Q+H + GLV +V CSL DMYAKC G + + F ++E ++SW A+
Sbjct: 285 LSLGKQLHSWAIRSGLVDDV--ECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTAL 342
Query: 233 IAAFADSGD-ANEAISIFRQMMHIGLI-PDSITFLSLLCACTSPMALNQGMQIHSYIVKV 290
I + + + A EAI++F +M+ G + P+ TF S AC + G Q+ K
Sbjct: 343 ITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKR 402
Query: 291 GFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRL 350
G ++ NS+++M+ K + DA FE++S+ NLVS+N L ++ + F+L
Sbjct: 403 GLASNSSVANSVISMFVKSDRMEDAQRAFESLSEK-NLVSYNTFLDGTCRNLNFEQAFKL 461
Query: 351 FKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAK 410
++ E + T +LL A + S+ G Q+H VK GL + V N LI MY+K
Sbjct: 462 LSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSK 521
Query: 411 CGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGV 470
CGS+ A RVF+ EN NVISW+S+I G+A G L F +M GV+PNEVTYV +
Sbjct: 522 CGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAI 581
Query: 471 LSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDP 530
LSACSH+GLV EGW +N+M E+ I P EH++CMVDLL RAG L +A FI F
Sbjct: 582 LSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQA 641
Query: 531 DITTWKTLLSSCKTHGNVDIAERAAENILKLDPSNSAALVLLSSIHASAGNWEDVAKLRK 590
D+ W+T L +C+ H N ++ + AA IL+LDP+ AA + LS+I+A AG WE+ ++R+
Sbjct: 642 DVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRR 701
Query: 591 VLDD 594
+ +
Sbjct: 702 KMKE 705
Score = 200 bits (508), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 147/513 (28%), Positives = 262/513 (51%), Gaps = 25/513 (4%)
Query: 49 MLRSGFFP-DQLTFGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFG 107
M R G P D +TF S++K+C A D LG+ +HA +I+ V N LIS+Y+ G
Sbjct: 52 MARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSG 111
Query: 108 QVAHASDVFTMIS---IKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLG 164
A A DVF + +D++SWS+M+ + G E++A+ +F + L G+ PN++
Sbjct: 112 DSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLV-PNDYCYT 170
Query: 165 SVFSACSSLLEPEYGRQIHGICAKFG-LVRNVFSGCSLCDMYAKC-GFLPSAKTAFYQIE 222
+V ACS+ GR G K G +V GCSL DM+ K +A F ++
Sbjct: 171 AVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMS 230
Query: 223 SPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQ 282
++V+W +I G EAI F M+ G D T S+ AC L+ G Q
Sbjct: 231 ELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQ 290
Query: 283 IHSYIVKVGFNKEVALYNSLLTMYTKCS---NLHDALSVFEAISKNANLVSWNAILSACL 339
+HS+ ++ G +V SL+ MY KCS ++ D VF+ + ++ +++SW A+++ +
Sbjct: 291 LHSWAIRSGLVDDVEC--SLVDMYAKCSADGSVDDCRKVFDRM-EDHSVMSWTALITGYM 347
Query: 340 QH-KQAGETFRLFKQMLFSEN-KPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLD 397
++ A E LF +M+ + +PN T ++ C L+ VG QV + K GL +
Sbjct: 348 KNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASN 407
Query: 398 VSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKM-- 455
SV+N +I M+ K + AQR F+S N++S+++ + G + +A L ++
Sbjct: 408 SSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITE 467
Query: 456 RNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGC 515
R LGV + T+ +LS +++G + +G +++ + +LG+ + + ++ + ++ G
Sbjct: 468 RELGV--SAFTFASLLSGVANVGSIRKGEQIHSQV-VKLGLSCNQPVCNALISMYSKCGS 524
Query: 516 LYEAETFIRKTGF--DPDITTWKTLLSSCKTHG 546
+ +T R F + ++ +W ++++ HG
Sbjct: 525 I---DTASRVFNFMENRNVISWTSMITGFAKHG 554
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 395 bits (1014), Expect = e-110, Method: Compositional matrix adjust.
Identities = 214/592 (36%), Positives = 338/592 (57%), Gaps = 6/592 (1%)
Query: 2 YGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTF 61
Y K G++ AR VFDA+ ++ V+WT+MISG + G+ ++ ++ Q++ PD
Sbjct: 193 YLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYIL 252
Query: 62 GSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISI 121
+++ AC I + G+Q+HAH+++ G N LI Y G+V A +F +
Sbjct: 253 STVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPN 312
Query: 122 KDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQ 181
K++ISW++++ G+ Q EA+ LF M + G+ +P+ + S+ ++C+SL +G Q
Sbjct: 313 KNIISWTTLLSGYKQNALHKEAMELFTSMSKFGL-KPDMYACSSILTSCASLHALGFGTQ 371
Query: 182 IHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSG- 240
+H K L + + SL DMYAKC L A+ F + D+V +NA+I ++ G
Sbjct: 372 VHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGT 431
Query: 241 --DANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVAL 298
+ +EA++IFR M + P +TF+SLL A S +L QIH + K G N ++
Sbjct: 432 QWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFA 491
Query: 299 YNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSE 358
++L+ +Y+ C L D+ VF+ + K +LV WN++ + +Q + E LF ++ S
Sbjct: 492 GSALIDVYSNCYCLKDSRLVFDEM-KVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSR 550
Query: 359 NKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQ 418
+P+ T N++ LAS+++G + HC +K GL + ++N L+DMYAKCGS A
Sbjct: 551 ERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAH 610
Query: 419 RVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIG 478
+ FDS + +V+ W+S+I YA G G +AL + KM + G+ PN +T+VGVLSACSH G
Sbjct: 611 KAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAG 670
Query: 479 LVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTL 538
LVE+G + M GI P EH+ CMV LL RAG L +A I K P W++L
Sbjct: 671 LVEDGLKQFELM-LRFGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSL 729
Query: 539 LSSCKTHGNVDIAERAAENILKLDPSNSAALVLLSSIHASAGNWEDVAKLRK 590
LS C GNV++AE AAE + DP +S + +LS+I+AS G W + K+R+
Sbjct: 730 LSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSNIYASKGMWTEAKKVRE 781
Score = 270 bits (690), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 180/609 (29%), Positives = 313/609 (51%), Gaps = 18/609 (2%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRS-GFFPDQL 59
+Y + G M AR+VF+ M RN+VSW++M+S + +G E++V++++ R+ P++
Sbjct: 88 LYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEY 147
Query: 60 TFGSIIKACCIAGDIYLGR----QLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDV 115
S I+AC +G GR QL + ++KSGF + LI Y G + +A V
Sbjct: 148 ILSSFIQAC--SGLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLV 205
Query: 116 FTMISIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLE 175
F + K ++W++MI G ++G +L LF ++ V P+ ++L +V SACS L
Sbjct: 206 FDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVV-PDGYILSTVLSACSILPF 264
Query: 176 PEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAA 235
E G+QIH ++GL + L D Y KCG + +A F + + +++SW +++
Sbjct: 265 LEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSG 324
Query: 236 FADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKE 295
+ + EA+ +F M GL PD S+L +C S AL G Q+H+Y +K +
Sbjct: 325 YKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGND 384
Query: 296 VALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAIL---SACLQHKQAGETFRLFK 352
+ NSL+ MY KC L DA VF+ I A++V +NA++ S + E +F+
Sbjct: 385 SYVTNSLIDMYAKCDCLTDARKVFD-IFAAADVVLFNAMIEGYSRLGTQWELHEALNIFR 443
Query: 353 QMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCG 412
M F +P+++T +LL A L SL + Q+H K GL LD+ + LID+Y+ C
Sbjct: 444 DMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCY 503
Query: 413 SVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLS 472
+ ++ VFD + +++ W+S+ GY EALNLF +++ RP+E T+ +++
Sbjct: 504 CLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVT 563
Query: 473 ACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDI 532
A ++ V+ G + + + G+ + ++D+ A+ G +A + D+
Sbjct: 564 AAGNLASVQLGQEFHCQLLKR-GLECNPYITNALLDMYAKCGSPEDAHKAF-DSAASRDV 621
Query: 533 TTWKTLLSSCKTHGNVDIAERAAENILK--LDPSNSAALVLLSSIHASAGNWED-VAKLR 589
W +++SS HG A + E ++ ++P N V + S + AG ED + +
Sbjct: 622 VCWNSVISSYANHGEGKKALQMLEKMMSEGIEP-NYITFVGVLSACSHAGLVEDGLKQFE 680
Query: 590 KVLDDGYDP 598
+L G +P
Sbjct: 681 LMLRFGIEP 689
Score = 223 bits (568), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 143/471 (30%), Positives = 236/471 (50%), Gaps = 18/471 (3%)
Query: 80 LHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIKDLISWSSMIRGFTQLGY 139
+H +I G N LI++Y+ G + +A VF + ++L+SWS+M+ G
Sbjct: 66 VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGI 125
Query: 140 EIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGR----QIHGICAKFGLVRNV 195
E+L +F + R PNE++L S ACS L GR Q+ K G R+V
Sbjct: 126 YEESLVVFLEFWRTRKDSPNEYILSSFIQACSGL--DGRGRWMVFQLQSFLVKSGFDRDV 183
Query: 196 FSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHI 255
+ G L D Y K G + A+ F + V+W +I+ G + ++ +F Q+M
Sbjct: 184 YVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMED 243
Query: 256 GLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDA 315
++PD ++L AC+ L G QIH++I++ G + +L N L+ Y KC + A
Sbjct: 244 NVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAA 303
Query: 316 LSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAE 375
+F + N N++SW +LS Q+ E LF M KP+M +++L +CA
Sbjct: 304 HKLFNGMP-NKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCAS 362
Query: 376 LASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSL 435
L +L G QVH +++K+ L D V+N LIDMYAKC + A++VFD +V+ ++++
Sbjct: 363 LHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAM 422
Query: 436 IVGYAMSGLG---HEALNLFRKMRNLGVRPNEVTYVGVLSAC---SHIGLVEEGWNLYNT 489
I GY+ G HEALN+FR MR +RP+ +T+V +L A + +GL ++ L
Sbjct: 423 IEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFK 482
Query: 490 MEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTLLS 540
L I S ++D+ + CL ++ + D+ W ++ +
Sbjct: 483 YGLNLDIFAG----SALIDVYSNCYCLKDSRLVFDEMKV-KDLVIWNSMFA 528
Score = 163 bits (413), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 103/371 (27%), Positives = 191/371 (51%), Gaps = 9/371 (2%)
Query: 154 GVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPS 213
G+ EF A LL Y +HG +GL + + L ++Y++ G +
Sbjct: 40 GIRGRREFARLLQLRASDDLLH--YQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVY 97
Query: 214 AKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGL-IPDSITFLSLLCACT 272
A+ F ++ +LVSW+ +++A G E++ +F + P+ S + AC+
Sbjct: 98 ARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACS 157
Query: 273 SPMALNQGM--QIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVS 330
+ M Q+ S++VK GF+++V + L+ Y K N+ A VF+A+ + + V+
Sbjct: 158 GLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKST-VT 216
Query: 331 WNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSV 390
W ++S C++ ++ + +LF Q++ P+ ++ +L C+ L LE G Q+H +
Sbjct: 217 WTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHIL 276
Query: 391 KSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALN 450
+ GL +D S+ N LID Y KCG VI A ++F+ N N+ISW++L+ GY + L EA+
Sbjct: 277 RYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAME 336
Query: 451 LFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYN-TMEEELGIPPAREHFSCMVDL 509
LF M G++P+ +L++C+ + + G ++ T++ LG + ++D+
Sbjct: 337 LFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTN--SLIDM 394
Query: 510 LARAGCLYEAE 520
A+ CL +A
Sbjct: 395 YAKCDCLTDAR 405
Score = 122 bits (306), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 79/331 (23%), Positives = 156/331 (47%), Gaps = 20/331 (6%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
+Y C +KD+R VFD M ++++V W SM +GY Q + EA+ +++++ S PD+ T
Sbjct: 498 VYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFT 557
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMIS 120
F +++ A + LG++ H ++K G + N L+ MY G A F +
Sbjct: 558 FANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAA 617
Query: 121 IKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGR 180
+D++ W+S+I + G +AL + M+ +G+ +PN V SACS E G
Sbjct: 618 SRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGI-EPNYITFVGVLSACSHAGLVEDGL 676
Query: 181 QIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIES-PDLVSWNAIIAAFADS 239
+ + +FG+ + + + G L A+ ++ + P + W ++++ A +
Sbjct: 677 KQFELMLRFGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKA 736
Query: 240 GDANEAISIFRQMMHIGLIPD-----SITFLSLLCAC----TSPMALNQGMQIHSYIVK- 289
G+ + + + ++ D S T LS + A T + + M++ + +
Sbjct: 737 GN----VELAEHAAEMAILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERMKVEGVVKEP 792
Query: 290 ----VGFNKEVALYNSLLTMYTKCSNLHDAL 316
+G NKEV ++ S + K + +++ L
Sbjct: 793 GRSWIGINKEVHIFLSKDKSHCKANQIYEVL 823
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 79/176 (44%), Gaps = 34/176 (19%)
Query: 379 LEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVG 438
L N VH + GL LD +SN LI++Y++ G +++A++VF+ N++SWS+++
Sbjct: 60 LHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSA 119
Query: 439 YAMSGLGHEALNLFRKM-RNLGVRPNEVTYVGVLSACSHIGLVEEG-WNLYNTMEEELGI 496
G+ E+L +F + R PNE + ACS GL G W
Sbjct: 120 CNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACS--GLDGRGRW------------ 165
Query: 497 PPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTLLSSCKTHGNVDIAE 552
+++ ++F+ K+GFD D+ L+ GN+D A
Sbjct: 166 ------------------MVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYAR 203
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 392 bits (1007), Expect = e-109, Method: Compositional matrix adjust.
Identities = 202/599 (33%), Positives = 340/599 (56%), Gaps = 8/599 (1%)
Query: 2 YGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGF--FPDQL 59
Y CG + AR++F+ M +++S+ +I Y + G ++A+ ++I+M+ G PD
Sbjct: 59 YALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGY 118
Query: 60 TFGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMI 119
T+ + KA + LG +H +++S FG QN L++MY NFG+V A DVF ++
Sbjct: 119 TYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVM 178
Query: 120 SIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYG 179
+D+ISW++MI G+ + GY +AL +F M+ + V + + S+ C L + E G
Sbjct: 179 KNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESV-DLDHATIVSMLPVCGHLKDLEMG 237
Query: 180 RQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADS 239
R +H + + L + +L +MY KCG + A+ F ++E D+++W +I + +
Sbjct: 238 RNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTED 297
Query: 240 GDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALY 299
GD A+ + R M G+ P+++T SL+ C + +N G +H + V+ ++ +
Sbjct: 298 GDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIE 357
Query: 300 NSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSEN 359
SL++MY KC + VF SK + W+AI++ C+Q++ + LFK+M +
Sbjct: 358 TSLISMYAKCKRVDLCFRVFSGASK-YHTGPWSAIIAGCVQNELVSDALGLFKRMRREDV 416
Query: 360 KPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQR 419
+PN+ T+ +LL A LA L +HC+ K+G + + + GL+ +Y+KCG++ A +
Sbjct: 417 EPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHK 476
Query: 420 VFDSTE----NPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACS 475
+F+ + + +V+ W +LI GY M G GH AL +F +M GV PNE+T+ L+ACS
Sbjct: 477 IFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACS 536
Query: 476 HIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTW 535
H GLVEEG L+ M E H++C+VDLL RAG L EA I F+P T W
Sbjct: 537 HSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVW 596
Query: 536 KTLLSSCKTHGNVDIAERAAENILKLDPSNSAALVLLSSIHASAGNWEDVAKLRKVLDD 594
LL++C TH NV + E AA + +L+P N+ VLL++I+A+ G W+D+ K+R ++++
Sbjct: 597 GALLAACVTHENVQLGEMAANKLFELEPENTGNYVLLANIYAALGRWKDMEKVRSMMEN 655
Score = 204 bits (520), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 132/441 (29%), Positives = 215/441 (48%), Gaps = 6/441 (1%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
MY G ++ AR VFD M R+V+SW +MISGY +NG N+A++M+ M+ D T
Sbjct: 161 MYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHAT 220
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMIS 120
S++ C D+ +GR +H V + G + +N L++MY G++ A VF +
Sbjct: 221 IVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRME 280
Query: 121 IKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGR 180
+D+I+W+ MI G+T+ G AL L R M +GV +PN + S+ S C L+ G+
Sbjct: 281 RRDVITWTCMINGYTEDGDVENALELCRLMQFEGV-RPNAVTIASLVSVCGDALKVNDGK 339
Query: 181 QIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSG 240
+HG + + ++ SL MYAKC + F W+AIIA +
Sbjct: 340 CLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNE 399
Query: 241 DANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYN 300
++A+ +F++M + P+ T SLL A + L Q M IH Y+ K GF +
Sbjct: 400 LVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAAT 459
Query: 301 SLLTMYTKCSNLHDALSVFEAIS---KNANLVSWNAILSACLQHKQAGETFRLFKQMLFS 357
L+ +Y+KC L A +F I K+ ++V W A++S H ++F +M+ S
Sbjct: 460 GLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRS 519
Query: 358 ENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVS-NGLIDMYAKCGSVIH 416
PN IT T+ L C+ +E G + F ++ L S ++D+ + G +
Sbjct: 520 GVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDE 579
Query: 417 AQRVFDSTE-NPNVISWSSLI 436
A + + P W +L+
Sbjct: 580 AYNLITTIPFEPTSTVWGALL 600
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 384 bits (986), Expect = e-106, Method: Compositional matrix adjust.
Identities = 208/617 (33%), Positives = 332/617 (53%), Gaps = 48/617 (7%)
Query: 23 VVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTFGSIIKACCIAGDIYLGRQLHA 82
V W S+I Y NG N+ + ++ M + PD TF + KAC + G HA
Sbjct: 92 VYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHA 151
Query: 83 HVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIKDLISWSSMIRGFTQLGYEIE 142
+ +GF ++ N L++MY+ ++ A VF +S+ D++SW+S+I + +LG
Sbjct: 152 LSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKV 211
Query: 143 ALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFSGCSLC 202
AL +F M + +P+ L +V C+SL G+Q+H +++N+F G L
Sbjct: 212 ALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLV 271
Query: 203 DMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIF------------- 249
DMYAKCG + A T F + D+VSWNA++A ++ G +A+ +F
Sbjct: 272 DMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVV 331
Query: 250 ----------------------RQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYI 287
RQM+ G+ P+ +T +S+L C S AL G +IH Y
Sbjct: 332 TWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYA 391
Query: 288 VKV-------GFNKEVALYNSLLTMYTKCSNLHDALSVFEAIS-KNANLVSWNAILSACL 339
+K G E + N L+ MY KC + A ++F+++S K ++V+W ++
Sbjct: 392 IKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYS 451
Query: 340 QHKQAGETFRLFKQMLFSEN---KPNMITITNLLGTCAELASLEVGNQVHCFSVKSGL-V 395
QH A + L +M F E+ +PN TI+ L CA LA+L +G Q+H +++++
Sbjct: 452 QHGDANKALELLSEM-FEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNA 510
Query: 396 LDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKM 455
+ + VSN LIDMYAKCGS+ A+ VFD+ N ++W+SL+ GY M G G EAL +F +M
Sbjct: 511 VPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEM 570
Query: 456 RNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGC 515
R +G + + VT + VL ACSH G++++G +N M+ G+ P EH++C+VDLL RAG
Sbjct: 571 RRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGR 630
Query: 516 LYEAETFIRKTGFDPDITTWKTLLSSCKTHGNVDIAERAAENILKLDPSNSAALVLLSSI 575
L A I + +P W LS C+ HG V++ E AAE I +L ++ + LLS++
Sbjct: 631 LNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNL 690
Query: 576 HASAGNWEDVAKLRKVL 592
+A+AG W+DV ++R ++
Sbjct: 691 YANAGRWKDVTRIRSLM 707
Score = 194 bits (492), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 140/490 (28%), Positives = 237/490 (48%), Gaps = 60/490 (12%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRS-GFFPDQL 59
MY +C S+ DAR+VFD M + +VVSW S+I Y++ G+ A+ M+ +M G PD +
Sbjct: 171 MYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNI 230
Query: 60 TFGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMI 119
T +++ C G LG+QLH + S ++ N L+ MY G + A+ VF+ +
Sbjct: 231 TLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNM 290
Query: 120 SIKDLISWSSMIRGFTQLGYEIEALYLF-------------------------------- 147
S+KD++SW++M+ G++Q+G +A+ LF
Sbjct: 291 SVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEAL 350
Query: 148 ---RDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGL-VRNVFSG----- 198
R ML G+ +PNE L SV S C+S+ +G++IH K+ + +R G
Sbjct: 351 GVCRQMLSSGI-KPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMV 409
Query: 199 -CSLCDMYAKCGFLPSAKTAFYQI--ESPDLVSWNAIIAAFADSGDANEAISIFRQMMH- 254
L DMYAKC + +A+ F + + D+V+W +I ++ GDAN+A+ + +M
Sbjct: 410 INQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEE 469
Query: 255 -IGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALY--NSLLTMYTKCSN 311
P++ T L AC S AL G QIH+Y ++ N V L+ N L+ MY KC +
Sbjct: 470 DCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNA-VPLFVSNCLIDMYAKCGS 528
Query: 312 LHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLG 371
+ DA VF+ + N V+W ++++ H E +F +M K + +T+ +L
Sbjct: 529 ISDARLVFDNMMAK-NEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLY 587
Query: 372 TCAELASLEVGNQVHCFSVKSGLVLDVSVSNG----LIDMYAKCGSVIHAQRVFDSTE-N 426
C+ ++ G + + + V VS L+D+ + G + A R+ +
Sbjct: 588 ACSHSGMIDQGME---YFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPME 644
Query: 427 PNVISWSSLI 436
P + W + +
Sbjct: 645 PPPVVWVAFL 654
Score = 174 bits (441), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 113/363 (31%), Positives = 183/363 (50%), Gaps = 26/363 (7%)
Query: 2 YGKCGSMKDARQVFDAMHLR----NVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPD 57
Y + G +DA ++F+ M +VV+W++ ISGY+Q G G EA+ + QML SG P+
Sbjct: 305 YSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPN 364
Query: 58 QLTFGSIIKACCIAGDIYLGRQLHAHVI-------KSGFGGHLVAQNGLISMYTNFGQVA 110
++T S++ C G + G+++H + I K+G G + N LI MY +V
Sbjct: 365 EVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVD 424
Query: 111 HASDVFTMISIK--DLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVY-QPNEFVLGSVF 167
A +F +S K D+++W+ MI G++Q G +AL L +M + +PN F +
Sbjct: 425 TARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCAL 484
Query: 168 SACSSLLEPEYGRQIHGICAKFGLVRN------VFSGCSLCDMYAKCGFLPSAKTAFYQI 221
AC+SL G+QIH +RN +F L DMYAKCG + A+ F +
Sbjct: 485 VACASLAALRIGKQIHAYA-----LRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNM 539
Query: 222 ESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGM 281
+ + V+W +++ + G EA+ IF +M IG D +T L +L AC+ ++QGM
Sbjct: 540 MAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGM 599
Query: 282 QIHSYIVKV-GFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQ 340
+ + + V G + Y L+ + + L+ AL + E + V W A LS C
Sbjct: 600 EYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRI 659
Query: 341 HKQ 343
H +
Sbjct: 660 HGK 662
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 88/336 (26%), Positives = 158/336 (47%), Gaps = 23/336 (6%)
Query: 277 LNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAIS-KNANLVSWNAIL 335
++Q IH ++ G + L + L++ Y L A+S+ +A + WN+++
Sbjct: 41 ISQVKLIHQKLLSFGI-LTLNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLI 99
Query: 336 SACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLV 395
+ + A + LF M P+ T + C E++S+ G H S+ +G +
Sbjct: 100 RSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFI 159
Query: 396 LDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKM 455
+V V N L+ MY++C S+ A++VFD +V+SW+S+I YA G AL +F +M
Sbjct: 160 SNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRM 219
Query: 456 RN-LGVRPNEVTYVGVLSACSHIGLVEEGWNLY-----NTMEEELGIPPAREHFSCMVDL 509
N G RP+ +T V VL C+ +G G L+ + M + + + +C+VD+
Sbjct: 220 TNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVG------NCLVDM 273
Query: 510 LARAGCLYEAETFIRKTGFDPDITTWKTLLSSCKTHGNVDIA----ERAAENILKLDPSN 565
A+ G + EA T D+ +W +++ G + A E+ E +K+D
Sbjct: 274 YAKCGMMDEANTVFSNMSVK-DVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVT 332
Query: 566 SAALVLLSSIHASAG-NWEDVAKLRKVLDDGYDPAQ 600
+A + S +A G +E + R++L G P +
Sbjct: 333 WSAAI---SGYAQRGLGYEALGVCRQMLSSGIKPNE 365
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 119/241 (49%), Gaps = 8/241 (3%)
Query: 1 MYGKCGSMKDARQVFDAM--HLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSG--FFP 56
MY KC + AR +FD++ R+VV+WT MI GYSQ+G N+A+ + +M P
Sbjct: 416 MYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRP 475
Query: 57 DQLTFGSIIKACCIAGDIYLGRQLHAHVIKSGFGG-HLVAQNGLISMYTNFGQVAHASDV 115
+ T + AC + +G+Q+HA+ +++ L N LI MY G ++ A V
Sbjct: 476 NAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLV 535
Query: 116 FTMISIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLE 175
F + K+ ++W+S++ G+ GY EAL +F +M R G ++ + L V ACS
Sbjct: 536 FDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIG-FKLDGVTLLVVLYACSHSGM 594
Query: 176 PEYGRQ-IHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIE-SPDLVSWNAII 233
+ G + + + FG+ L D+ + G L +A ++ P V W A +
Sbjct: 595 IDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFL 654
Query: 234 A 234
+
Sbjct: 655 S 655
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 384 bits (985), Expect = e-106, Method: Compositional matrix adjust.
Identities = 205/596 (34%), Positives = 340/596 (57%), Gaps = 3/596 (0%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
MY + G + ARQVFD M +R++VSW S+ISGYS +G EA+ +Y ++ S PD T
Sbjct: 150 MYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFT 209
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMIS 120
S++ A + G+ LH +KSG +V NGL++MY F + A VF +
Sbjct: 210 VSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMD 269
Query: 121 IKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGR 180
++D +S+++MI G+ +L E++ +F + L Q ++P+ + SV AC L + +
Sbjct: 270 VRDSVSYNTMICGYLKLEMVEESVRMFLENLDQ--FKPDLLTVSSVLRACGHLRDLSLAK 327
Query: 181 QIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSG 240
I+ K G V L D+YAKCG + +A+ F +E D VSWN+II+ + SG
Sbjct: 328 YIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSG 387
Query: 241 DANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYN 300
D EA+ +F+ MM + D IT+L L+ T L G +HS +K G ++++ N
Sbjct: 388 DLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSN 447
Query: 301 SLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENK 360
+L+ MY KC + D+L +F ++ + V+WN ++SAC++ ++ QM SE
Sbjct: 448 ALIDMYAKCGEVGDSLKIFSSMG-TGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVV 506
Query: 361 PNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRV 420
P+M T L CA LA+ +G ++HC ++ G ++ + N LI+MY+KCG + ++ RV
Sbjct: 507 PDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRV 566
Query: 421 FDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLV 480
F+ +V++W+ +I Y M G G +AL F M G+ P+ V ++ ++ ACSH GLV
Sbjct: 567 FERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLV 626
Query: 481 EEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTLLS 540
+EG + M+ I P EH++C+VDLL+R+ + +AE FI+ PD + W ++L
Sbjct: 627 DEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLR 686
Query: 541 SCKTHGNVDIAERAAENILKLDPSNSAALVLLSSIHASAGNWEDVAKLRKVLDDGY 596
+C+T G+++ AER + I++L+P + +L S+ +A+ W+ V+ +RK L D +
Sbjct: 687 ACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKWDKVSLIRKSLKDKH 742
Score = 257 bits (657), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 167/564 (29%), Positives = 285/564 (50%), Gaps = 20/564 (3%)
Query: 21 RNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTFGSIIKACCIAGDIYLGRQL 80
+NV W S+I +S+NG EA+ Y ++ S PD+ TF S+IKAC D +G +
Sbjct: 69 KNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLV 128
Query: 81 HAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIKDLISWSSMIRGFTQLGYE 140
+ ++ GF L N L+ MY+ G + A VF + ++DL+SW+S+I G++ GY
Sbjct: 129 YEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYY 188
Query: 141 IEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFSGCS 200
EAL ++ + L+ P+ F + SV A +LL + G+ +HG K G+ V
Sbjct: 189 EEALEIYHE-LKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNG 247
Query: 201 LCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPD 260
L MY K A+ F +++ D VS+N +I + E++ +F + + PD
Sbjct: 248 LVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLD-QFKPD 306
Query: 261 SITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFE 320
+T S+L AC L+ I++Y++K GF E + N L+ +Y KC ++ A VF
Sbjct: 307 LLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFN 366
Query: 321 AISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLE 380
++ + + VSWN+I+S +Q E +LFK M+ E + + IT L+ LA L+
Sbjct: 367 SM-ECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLK 425
Query: 381 VGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYA 440
G +H +KSG+ +D+SVSN LIDMYAKCG V + ++F S + ++W+++I
Sbjct: 426 FGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACV 485
Query: 441 MSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTM-----EEELG 495
G L + +MR V P+ T++ L C+ + G ++ + E EL
Sbjct: 486 RFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQ 545
Query: 496 IPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTLLSSCKTHGNVDIAERAA 555
I A ++++ ++ GCL + + D+ TW ++ + +G E+A
Sbjct: 546 IGNA------LIEMYSKCGCLENSSRVFERMS-RRDVVTWTGMIYAYGMYGE---GEKAL 595
Query: 556 ENILKLDPSN--SAALVLLSSIHA 577
E ++ S ++V ++ I+A
Sbjct: 596 ETFADMEKSGIVPDSVVFIAIIYA 619
Score = 233 bits (595), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 146/471 (30%), Positives = 259/471 (54%), Gaps = 6/471 (1%)
Query: 78 RQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMIS-IKDLISWSSMIRGFTQ 136
R++HA VI G LI Y++F + A + VF +S K++ W+S+IR F++
Sbjct: 24 RRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIRAFSK 83
Query: 137 LGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVF 196
G EAL F LR+ P+++ SV AC+ L + E G ++ G ++F
Sbjct: 84 NGLFPEALE-FYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLF 142
Query: 197 SGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIG 256
G +L DMY++ G L A+ F ++ DLVSWN++I+ ++ G EA+ I+ ++ +
Sbjct: 143 VGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSW 202
Query: 257 LIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDAL 316
++PDS T S+L A + + + QG +H + +K G N V + N L+ MY K DA
Sbjct: 203 IVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDAR 262
Query: 317 SVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAEL 376
VF+ + + VS+N ++ L+ + E+ R+F + L + KP+++T++++L C L
Sbjct: 263 RVFDEMDVRDS-VSYNTMICGYLKLEMVEESVRMFLENL-DQFKPDLLTVSSVLRACGHL 320
Query: 377 ASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLI 436
L + ++ + +K+G VL+ +V N LID+YAKCG +I A+ VF+S E + +SW+S+I
Sbjct: 321 RDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSII 380
Query: 437 VGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGI 496
GY SG EA+ LF+ M + + + +TY+ ++S + + ++ G L++ + GI
Sbjct: 381 SGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKS-GI 439
Query: 497 PPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTLLSSCKTHGN 547
+ ++D+ A+ G + ++ G D TW T++S+C G+
Sbjct: 440 CIDLSVSNALIDMYAKCGEVGDSLKIFSSMG-TGDTVTWNTVISACVRFGD 489
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 116/218 (53%)
Query: 270 ACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLV 329
A +S LN+ +IH+ ++ +G + L+ Y+ +LSVF +S N+
Sbjct: 13 ALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVY 72
Query: 330 SWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFS 389
WN+I+ A ++ E + ++ S+ P+ T +++ CA L E+G+ V+
Sbjct: 73 LWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQI 132
Query: 390 VKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEAL 449
+ G D+ V N L+DMY++ G + A++VFD +++SW+SLI GY+ G EAL
Sbjct: 133 LDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEAL 192
Query: 450 NLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLY 487
++ +++N + P+ T VL A ++ +V++G L+
Sbjct: 193 EIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLH 230
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 383 bits (983), Expect = e-106, Method: Compositional matrix adjust.
Identities = 200/583 (34%), Positives = 321/583 (55%), Gaps = 2/583 (0%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
+Y G++ A +F M R+ V++ ++I+G SQ G G +A+ ++ +M G PD T
Sbjct: 332 LYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNT 391
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMIS 120
S++ AC G ++ G+QLHA+ K GF + + L+++Y + A D F
Sbjct: 392 LASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETE 451
Query: 121 IKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGR 180
+++++ W+ M+ + L + +FR M + + PN++ S+ C L + E G
Sbjct: 452 VENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIV-PNQYTYPSILKTCIRLGDLELGE 510
Query: 181 QIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSG 240
QIH K N + L DMYAK G L +A + D+VSW +IA +
Sbjct: 511 QIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYN 570
Query: 241 DANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYN 300
++A++ FRQM+ G+ D + + + AC AL +G QIH+ GF+ ++ N
Sbjct: 571 FDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQN 630
Query: 301 SLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENK 360
+L+T+Y++C + ++ FE N ++WNA++S Q E R+F +M
Sbjct: 631 ALVTLYSRCGKIEESYLAFEQTEAGDN-IAWNALVSGFQQSGNNEEALRVFVRMNREGID 689
Query: 361 PNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRV 420
N T + + +E A+++ G QVH K+G + V N LI MYAKCGS+ A++
Sbjct: 690 NNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQ 749
Query: 421 FDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLV 480
F N +SW+++I Y+ G G EAL+ F +M + VRPN VT VGVLSACSHIGLV
Sbjct: 750 FLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLV 809
Query: 481 EEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTLLS 540
++G + +M E G+ P EH+ C+VD+L RAG L A+ FI++ PD W+TLLS
Sbjct: 810 DKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLS 869
Query: 541 SCKTHGNVDIAERAAENILKLDPSNSAALVLLSSIHASAGNWE 583
+C H N++I E AA ++L+L+P +SA VLLS+++A + W+
Sbjct: 870 ACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWD 912
Score = 278 bits (712), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 173/551 (31%), Positives = 278/551 (50%), Gaps = 9/551 (1%)
Query: 6 GSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTFGSII 65
G + A +VFD M R + +W MI + E ++++M+ P++ TF ++
Sbjct: 134 GDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVL 193
Query: 66 KAC---CIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIK 122
+AC +A D+ Q+HA ++ G V N LI +Y+ G V A VF + +K
Sbjct: 194 EACRGGSVAFDVV--EQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLK 251
Query: 123 DLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQI 182
D SW +MI G ++ E EA+ LF DM G+ P + SV SAC + E G Q+
Sbjct: 252 DHSSWVAMISGLSKNECEAEAIRLFCDMYVLGI-MPTPYAFSSVLSACKKIESLEIGEQL 310
Query: 183 HGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDA 242
HG+ K G + + +L +Y G L SA+ F + D V++N +I + G
Sbjct: 311 HGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYG 370
Query: 243 NEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSL 302
+A+ +F++M GL PDS T SL+ AC++ L +G Q+H+Y K+GF + +L
Sbjct: 371 EKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGAL 430
Query: 303 LTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPN 362
L +Y KC+++ AL F ++ N+V WN +L A +FR+F+QM E PN
Sbjct: 431 LNLYAKCADIETALDYFLE-TEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPN 489
Query: 363 MITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFD 422
T ++L TC L LE+G Q+H +K+ L+ V + LIDMYAK G + A +
Sbjct: 490 QYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILI 549
Query: 423 STENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEE 482
+V+SW+++I GY +AL FR+M + G+R +EV +SAC+ + ++E
Sbjct: 550 RFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKE 609
Query: 483 GWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTLLSSC 542
G ++ G + +V L +R G + E+ +T +I W L+S
Sbjct: 610 GQQIHAQACVS-GFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNI-AWNALVSGF 667
Query: 543 KTHGNVDIAER 553
+ GN + A R
Sbjct: 668 QQSGNNEEALR 678
Score = 272 bits (696), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 156/546 (28%), Positives = 279/546 (51%), Gaps = 4/546 (0%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
+Y + G + AR+VFD + L++ SW +MISG S+N EA+ ++ M G P
Sbjct: 231 LYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYA 290
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMIS 120
F S++ AC + +G QLH V+K GF N L+S+Y + G + A +F+ +S
Sbjct: 291 FSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMS 350
Query: 121 IKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGR 180
+D ++++++I G +Q GY +A+ LF+ M G+ +P+ L S+ ACS+ G+
Sbjct: 351 QRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGL-EPDSNTLASLVVACSADGTLFRGQ 409
Query: 181 QIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSG 240
Q+H K G N +L ++YAKC + +A F + E ++V WN ++ A+
Sbjct: 410 QLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLD 469
Query: 241 DANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYN 300
D + IFRQM ++P+ T+ S+L C L G QIHS I+K F + +
Sbjct: 470 DLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCS 529
Query: 301 SLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENK 360
L+ MY K L A + + ++VSW +++ Q+ + F+QML +
Sbjct: 530 VLIDMYAKLGKLDTAWDILIRFA-GKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIR 588
Query: 361 PNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRV 420
+ + +TN + CA L +L+ G Q+H + SG D+ N L+ +Y++CG + +
Sbjct: 589 SDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLA 648
Query: 421 FDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLV 480
F+ TE + I+W++L+ G+ SG EAL +F +M G+ N T+ + A S +
Sbjct: 649 FEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANM 708
Query: 481 EEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTLLS 540
++G ++ + + G E + ++ + A+ G + +AE + ++ +W +++
Sbjct: 709 KQGKQVHAVI-TKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEV-SWNAIIN 766
Query: 541 SCKTHG 546
+ HG
Sbjct: 767 AYSKHG 772
Score = 191 bits (484), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 131/498 (26%), Positives = 237/498 (47%), Gaps = 22/498 (4%)
Query: 53 GFFPDQLTFGSIIKACC-IAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAH 111
G P+ T +++ C G + GR+LH+ ++K G + L Y G +
Sbjct: 79 GIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYG 138
Query: 112 ASDVFTMISIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACS 171
A VF + + + +W+ MI+ E LF M+ + V PNE V AC
Sbjct: 139 AFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENV-TPNEGTFSGVLEACR 197
Query: 172 -SLLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWN 230
+ + QIH GL + L D+Y++ GF+ A+ F + D SW
Sbjct: 198 GGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWV 257
Query: 231 AIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKV 290
A+I+ + + EAI +F M +G++P F S+L AC +L G Q+H ++K+
Sbjct: 258 AMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKL 317
Query: 291 GFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRL 350
GF+ + + N+L+++Y NL A +F +S+ + V++N +++ Q + L
Sbjct: 318 GFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQR-DAVTYNTLINGLSQCGYGEKAMEL 376
Query: 351 FKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAK 410
FK+M +P+ T+ +L+ C+ +L G Q+H ++ K G + + L+++YAK
Sbjct: 377 FKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAK 436
Query: 411 CGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGV 470
C + A F TE NV+ W+ ++V Y + + +FR+M+ + PN+ TY +
Sbjct: 437 CADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSI 496
Query: 471 LSACSHIGLVEEGWNLYNTMEEELGIPPAREHF-------SCMVDLLARAGCLYEA-ETF 522
L C +G +E G +++ + + +F S ++D+ A+ G L A +
Sbjct: 497 LKTCIRLGDLELGEQIHSQI--------IKTNFQLNAYVCSVLIDMYAKLGKLDTAWDIL 548
Query: 523 IRKTGFDPDITTWKTLLS 540
IR G D+ +W T+++
Sbjct: 549 IRFAG--KDVVSWTTMIA 564
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 380 bits (975), Expect = e-105, Method: Compositional matrix adjust.
Identities = 202/593 (34%), Positives = 331/593 (55%), Gaps = 5/593 (0%)
Query: 2 YGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNG---QGNEAVVMYIQMLRSGFFPDQ 58
Y KCG + A +F+A+ ++VVSW S+I+GYSQNG + ++ +M P+
Sbjct: 59 YAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNA 118
Query: 59 LTFGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTM 118
T I KA +GRQ HA V+K G + L+ MY G V VF
Sbjct: 119 YTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAY 178
Query: 119 ISIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVY-QPNEFVLGSVFSACSSLLEPE 177
+ ++ +WS+M+ G+ G EA+ +F LR+ +++V +V S+ ++ +
Sbjct: 179 MPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVG 238
Query: 178 YGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFA 237
GRQIH I K GL+ V +L MY+KC L A F + ++W+A++ ++
Sbjct: 239 LGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYS 298
Query: 238 DSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVA 297
+G++ EA+ +F +M G+ P T + +L AC+ L +G Q+HS+++K+GF + +
Sbjct: 299 QNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLF 358
Query: 298 LYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFS 357
+L+ MY K L DA F+ + + ++ W +++S +Q+ E L+++M +
Sbjct: 359 ATTALVDMYAKAGCLADARKGFDCLQER-DVALWTSLISGYVQNSDNEEALILYRRMKTA 417
Query: 358 ENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHA 417
PN T+ ++L C+ LA+LE+G QVH ++K G L+V + + L MY+KCGS+
Sbjct: 418 GIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDG 477
Query: 418 QRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHI 477
VF T N +V+SW+++I G + +G G EAL LF +M G+ P++VT+V ++SACSH
Sbjct: 478 NLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHK 537
Query: 478 GLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKT 537
G VE GW +N M +++G+ P +H++CMVDLL+RAG L EA+ FI D + W+
Sbjct: 538 GFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRI 597
Query: 538 LLSSCKTHGNVDIAERAAENILKLDPSNSAALVLLSSIHASAGNWEDVAKLRK 590
LLS+CK HG ++ A E ++ L S+ V LS I+ + G DV ++ K
Sbjct: 598 LLSACKNHGKCELGVYAGEKLMALGSRESSTYVQLSGIYTALGRMRDVERVWK 650
Score = 251 bits (641), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 153/512 (29%), Positives = 269/512 (52%), Gaps = 17/512 (3%)
Query: 73 DIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIKDLISWSSMIR 132
++ GR +H +I++G + N L++ Y G++A A +F I KD++SW+S+I
Sbjct: 29 NLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLIT 88
Query: 133 GFTQLG---YEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKF 189
G++Q G + LFR+M Q + PN + L +F A SSL GRQ H + K
Sbjct: 89 GYSQNGGISSSYTVMQLFREMRAQDIL-PNAYTLAGIFKAESSLQSSTVGRQAHALVVKM 147
Query: 190 GLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIF 249
+++ SL MY K G + F + + +W+ +++ +A G EAI +F
Sbjct: 148 SSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVF 207
Query: 250 RQMM---HIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMY 306
+ G D + F ++L + + + + G QIH +K G VAL N+L+TMY
Sbjct: 208 NLFLREKEEGSDSDYV-FTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMY 266
Query: 307 TKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITI 366
+KC +L++A +F++ S + N ++W+A+++ Q+ ++ E +LF +M + KP+ TI
Sbjct: 267 SKCESLNEACKMFDS-SGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTI 325
Query: 367 TNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTEN 426
+L C+++ LE G Q+H F +K G + + L+DMYAK G + A++ FD +
Sbjct: 326 VGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQE 385
Query: 427 PNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNL 486
+V W+SLI GY + EAL L+R+M+ G+ PN+ T VL ACS + +E G +
Sbjct: 386 RDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQV 445
Query: 487 Y-NTMEEELGIP-PAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTLLSSCKT 544
+ +T++ G+ P S M ++ G L + R+T + D+ +W ++S
Sbjct: 446 HGHTIKHGFGLEVPIGSALSTM---YSKCGSLEDGNLVFRRTP-NKDVVSWNAMISGLSH 501
Query: 545 HGNVDIAERAAENILK--LDPSNSAALVLLSS 574
+G D A E +L ++P + + ++S+
Sbjct: 502 NGQGDEALELFEEMLAEGMEPDDVTFVNIISA 533
Score = 251 bits (640), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 159/507 (31%), Positives = 269/507 (53%), Gaps = 18/507 (3%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLR---SGFFPD 57
MY K G ++D +VF M RN +W++M+SGY+ G+ EA+ ++ LR G D
Sbjct: 162 MYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSD 221
Query: 58 QLTFGSIIKACCIAGDIY--LGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDV 115
+ F +++ + +A IY LGRQ+H IK+G G + N L++MY+ + A +
Sbjct: 222 YV-FTAVLSS--LAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKM 278
Query: 116 FTMISIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLE 175
F ++ I+WS+M+ G++Q G +EA+ LF M G+ +P+E+ + V +ACS +
Sbjct: 279 FDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGI-KPSEYTIVGVLNACSDICY 337
Query: 176 PEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAA 235
E G+Q+H K G R++F+ +L DMYAK G L A+ F ++ D+ W ++I+
Sbjct: 338 LEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISG 397
Query: 236 FADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKE 295
+ + D EA+ ++R+M G+IP+ T S+L AC+S L G Q+H + +K GF E
Sbjct: 398 YVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLE 457
Query: 296 VALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQML 355
V + ++L TMY+KC +L D VF + N ++VSWNA++S + Q E LF++ML
Sbjct: 458 VPIGSALSTMYSKCGSLEDGNLVFRR-TPNKDVVSWNAMISGLSHNGQGDEALELFEEML 516
Query: 356 FSENKPNMITITNLLGTCAELASLEVG-NQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSV 414
+P+ +T N++ C+ +E G + S + GL V ++D+ ++ G +
Sbjct: 517 AEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQL 576
Query: 415 IHAQRVFDSTE-NPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYV---GV 470
A+ +S + + W L+ G + K+ LG R + TYV G+
Sbjct: 577 KEAKEFIESANIDHGLCLWRILLSACKNHGKCELGVYAGEKLMALGSRESS-TYVQLSGI 635
Query: 471 LSACSHIGLVEEGWN--LYNTMEEELG 495
+A + VE W N + +E+G
Sbjct: 636 YTALGRMRDVERVWKHMRANGVSKEVG 662
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 99/211 (46%), Gaps = 8/211 (3%)
Query: 257 LIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDAL 316
L P + T L L + L G +H I++ G + + N L+ Y KC L A
Sbjct: 10 LNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAH 69
Query: 317 SVFEAISKNANLVSWNAILSACLQHKQAGETF---RLFKQMLFSENKPNMITITNLLGTC 373
S+F AI ++VSWN++++ Q+ ++ +LF++M + PN T+ +
Sbjct: 70 SIFNAIICK-DVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAE 128
Query: 374 AELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWS 433
+ L S VG Q H VK D+ V L+ MY K G V +VF N +WS
Sbjct: 129 SSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWS 188
Query: 434 SLIVGYAMSGLGHEALNLFRKMRNLGVRPNE 464
+++ GYA G EA+ +F NL +R E
Sbjct: 189 TMVSGYATRGRVEEAIKVF----NLFLREKE 215
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 106/227 (46%), Gaps = 9/227 (3%)
Query: 357 SENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIH 416
+E P+ T+ L ++ +L G VH +++G + +N L++ YAKCG +
Sbjct: 8 TELNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAK 67
Query: 417 AQRVFDSTENPNVISWSSLIVGYAMSG---LGHEALNLFRKMRNLGVRPNEVTYVGVLSA 473
A +F++ +V+SW+SLI GY+ +G + + LFR+MR + PN T G+ A
Sbjct: 68 AHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKA 127
Query: 474 CSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPD-- 531
S + G + + + S +V + +AG + E ++ + P+
Sbjct: 128 ESSLQSSTVGRQAHALVVKMSSFGDIYVDTS-LVGMYCKAGLV---EDGLKVFAYMPERN 183
Query: 532 ITTWKTLLSSCKTHGNVDIAERAAENILKLDPSNSAALVLLSSIHAS 578
TW T++S T G V+ A + L+ S + + +++ +S
Sbjct: 184 TYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSS 230
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 377 bits (969), Expect = e-104, Method: Compositional matrix adjust.
Identities = 196/587 (33%), Positives = 328/587 (55%), Gaps = 4/587 (0%)
Query: 6 GSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMY--IQMLRSGFFPDQLTFGS 63
G+++ ARQVFD M ++VSWTS+I Y +EA++++ ++++ PD
Sbjct: 54 GNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSV 113
Query: 64 IIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIKD 123
++KAC + +I G LHA+ +K+ + + L+ MY G++ + VF+ + ++
Sbjct: 114 VLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRN 173
Query: 124 LISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIH 183
++W+++I G G E L F +M R + + AC+ L + +YG+ IH
Sbjct: 174 AVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELS-DTYTFAIALKACAGLRQVKYGKAIH 232
Query: 184 GICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDAN 243
G V + SL MY +CG + F + D+VSW ++I A+ G
Sbjct: 233 THVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEV 292
Query: 244 EAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLL 303
+A+ F +M + + P+ TF S+ AC S L G Q+H ++ +G N +++ NS++
Sbjct: 293 KAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMM 352
Query: 304 TMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNM 363
MY+ C NL A +F+ + + +++SW+ I+ Q E F+ F M S KP
Sbjct: 353 KMYSTCGNLVSASVLFQGM-RCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTD 411
Query: 364 ITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDS 423
+ +LL +A +E G QVH ++ GL + +V + LI+MY+KCGS+ A +F
Sbjct: 412 FALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGE 471
Query: 424 TENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEG 483
T+ +++S +++I GYA G EA++LF K +G RP+ VT++ VL+AC+H G ++ G
Sbjct: 472 TDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDLG 531
Query: 484 WNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTLLSSCK 543
++ +N M+E + PA+EH+ CMVDLL RAG L +AE I + + D W TLL +CK
Sbjct: 532 FHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLLIACK 591
Query: 544 THGNVDIAERAAENILKLDPSNSAALVLLSSIHASAGNWEDVAKLRK 590
G+++ RAAE IL+LDP+ + ALV L++I++S GN E+ A +RK
Sbjct: 592 AKGDIERGRRAAERILELDPTCATALVTLANIYSSTGNLEEAANVRK 638
Score = 219 bits (558), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 134/458 (29%), Positives = 224/458 (48%), Gaps = 4/458 (0%)
Query: 105 NFGQVAHASDVFTMISIKDLISWSSMIRGFTQLGYEIEALYLFRDM-LRQGVYQPNEFVL 163
N G + A VF + D++SW+S+I+ + EAL LF M + P+ VL
Sbjct: 52 NAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVL 111
Query: 164 GSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIES 223
V AC YG +H K L+ +V+ G SL DMY + G + + F ++
Sbjct: 112 SVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPF 171
Query: 224 PDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQI 283
+ V+W AII +G E ++ F +M + D+ TF L AC + G I
Sbjct: 172 RNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAI 231
Query: 284 HSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQ 343
H++++ GF + + NSL TMYT+C + D L +FE +S+ ++VSW +++ A + Q
Sbjct: 232 HTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSER-DVVSWTSLIVAYKRIGQ 290
Query: 344 AGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNG 403
+ F +M S+ PN T ++ CA L+ L G Q+HC + GL +SVSN
Sbjct: 291 EVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNS 350
Query: 404 LIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPN 463
++ MY+ CG+++ A +F ++ISWS++I GY +G G E F MR G +P
Sbjct: 351 MMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPT 410
Query: 464 EVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFI 523
+ +LS ++ ++E G ++ + G+ S ++++ ++ G + EA
Sbjct: 411 DFALASLLSVSGNMAVIEGGRQVH-ALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIF 469
Query: 524 RKTGFDPDITTWKTLLSSCKTHGNVDIAERAAENILKL 561
+T D DI + +++ HG A E LK+
Sbjct: 470 GETDRD-DIVSLTAMINGYAEHGKSKEAIDLFEKSLKV 506
Score = 209 bits (531), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 135/497 (27%), Positives = 238/497 (47%), Gaps = 13/497 (2%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
MY + G + + +VF M RN V+WT++I+G G+ E + + +M RS D T
Sbjct: 152 MYKRVGKIDKSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYT 211
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMIS 120
F +KAC + G+ +H HVI GF L N L +MYT G++ +F +S
Sbjct: 212 FAIALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMS 271
Query: 121 IKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGR 180
+D++SW+S+I + ++G E++A+ F M R PNE S+FSAC+SL +G
Sbjct: 272 ERDVVSWTSLIVAYKRIGQEVKAVETFIKM-RNSQVPPNEQTFASMFSACASLSRLVWGE 330
Query: 181 QIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSG 240
Q+H GL ++ S+ MY+ CG L SA F + D++SW+ II + +G
Sbjct: 331 QLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAG 390
Query: 241 DANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYN 300
E F M G P SLL + + G Q+H+ + G + + +
Sbjct: 391 FGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRS 450
Query: 301 SLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENK 360
SL+ MY+KC ++ +A +F ++ ++VS A+++ +H ++ E LF++ L +
Sbjct: 451 SLINMYSKCGSIKEASMIFGETDRD-DIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFR 509
Query: 361 PNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNG-LIDMYAKCGSVIHAQR 419
P+ +T ++L C L++G ++ + G ++D+ + G + A++
Sbjct: 510 PDSVTFISVLTACTHSGQLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEK 569
Query: 420 VFDSTE-NPNVISWSSLIVGYAMSG---LGHEALNLFRKMRNLGVRPNEVTYVGVLSAC- 474
+ + + + W++L++ G G A R L + P T + L+
Sbjct: 570 MINEMSWKKDDVVWTTLLIACKAKGDIERGRRAAE-----RILELDPTCATALVTLANIY 624
Query: 475 SHIGLVEEGWNLYNTME 491
S G +EE N+ M+
Sbjct: 625 SSTGNLEEAANVRKNMK 641
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 376 bits (966), Expect = e-104, Method: Compositional matrix adjust.
Identities = 199/594 (33%), Positives = 333/594 (56%), Gaps = 3/594 (0%)
Query: 2 YGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTF 61
Y + G + ++FD + ++ V W M++GY++ G + + + M P+ +TF
Sbjct: 183 YLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTF 242
Query: 62 GSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISI 121
++ C I LG QLH V+ SG +N L+SMY+ G+ AS +F M+S
Sbjct: 243 DCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSR 302
Query: 122 KDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQ 181
D ++W+ MI G+ Q G E+L F +M+ GV P+ S+ + S EY +Q
Sbjct: 303 ADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVL-PDAITFSSLLPSVSKFENLEYCKQ 361
Query: 182 IHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGD 241
IH + + ++F +L D Y KC + A+ F Q S D+V + A+I+ + +G
Sbjct: 362 IHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGL 421
Query: 242 ANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNS 301
+++ +FR ++ + + P+ IT +S+L +AL G ++H +I+K GF+ + +
Sbjct: 422 YIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCA 481
Query: 302 LLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKP 361
++ MY KC ++ A +FE +SK ++VSWN++++ C Q +F+QM S
Sbjct: 482 VIDMYAKCGRMNLAYEIFERLSKR-DIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICY 540
Query: 362 NMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVF 421
+ ++I+ L CA L S G +H F +K L DV + LIDMYAKCG++ A VF
Sbjct: 541 DCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVF 600
Query: 422 DSTENPNVISWSSLIVGYAMSGLGHEALNLFRKM-RNLGVRPNEVTYVGVLSACSHIGLV 480
+ + N++SW+S+I G ++L LF +M G+RP+++T++ ++S+C H+G V
Sbjct: 601 KTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDV 660
Query: 481 EEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTLLS 540
+EG + +M E+ GI P +EH++C+VDL RAG L EA ++ F PD W TLL
Sbjct: 661 DEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLG 720
Query: 541 SCKTHGNVDIAERAAENILKLDPSNSAALVLLSSIHASAGNWEDVAKLRKVLDD 594
+C+ H NV++AE A+ ++ LDPSNS VL+S+ HA+A WE V K+R ++ +
Sbjct: 721 ACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAHANAREWESVTKVRSLMKE 774
Score = 245 bits (625), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 158/552 (28%), Positives = 288/552 (52%), Gaps = 10/552 (1%)
Query: 1 MYGKCGSMKDARQVFDAMHLR--NVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQ 58
MY CGS D ++F + LR ++ W S+IS + +NG N+A+ Y +ML G PD
Sbjct: 79 MYAMCGSFSDCGKMFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDV 138
Query: 59 LTFGSIIKACCIAGDIYLGRQLHAHVIKS-GFGGHLVAQNGLISMYTNFGQVAHASDVFT 117
TF ++KA C+A + G + + S G + + LI Y +G++ S +F
Sbjct: 139 STFPCLVKA-CVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFD 197
Query: 118 MISIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPE 177
+ KD + W+ M+ G+ + G ++++ ++R PN V S C+S L +
Sbjct: 198 RVLQKDCVIWNVMLNGYAKCG-ALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLID 256
Query: 178 YGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFA 237
G Q+HG+ G+ SL MY+KCG A F + D V+WN +I+ +
Sbjct: 257 LGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYV 316
Query: 238 DSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVA 297
SG E+++ F +M+ G++PD+ITF SLL + + L QIH YI++ + ++
Sbjct: 317 QSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIF 376
Query: 298 LYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFS 357
L ++L+ Y KC + A ++F + + ++V + A++S L + ++ +F+ ++
Sbjct: 377 LTSALIDAYFKCRGVSMAQNIFSQCN-SVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKV 435
Query: 358 ENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHA 417
+ PN IT+ ++L L +L++G ++H F +K G ++ +IDMYAKCG + A
Sbjct: 436 KISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLA 495
Query: 418 QRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHI 477
+F+ +++SW+S+I A S A+++FR+M G+ + V+ LSAC+++
Sbjct: 496 YEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANL 555
Query: 478 GLVEEGWNLYNTM-EEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWK 536
G ++ M + L E S ++D+ A+ G L +A + KT + +I +W
Sbjct: 556 PSESFGKAIHGFMIKHSLASDVYSE--STLIDMYAKCGNL-KAAMNVFKTMKEKNIVSWN 612
Query: 537 TLLSSCKTHGNV 548
+++++C HG +
Sbjct: 613 SIIAACGNHGKL 624
Score = 229 bits (583), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 129/439 (29%), Positives = 232/439 (52%), Gaps = 5/439 (1%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
MY KCG DA ++F M + V+W MISGY Q+G E++ + +M+ SG PD +T
Sbjct: 283 MYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAIT 342
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMIS 120
F S++ + ++ +Q+H ++++ + + LI Y V+ A ++F+ +
Sbjct: 343 FSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCN 402
Query: 121 IKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGR 180
D++ +++MI G+ G I++L +FR +++ + PNE L S+ LL + GR
Sbjct: 403 SVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKI-SPNEITLVSILPVIGILLALKLGR 461
Query: 181 QIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSG 240
++HG K G GC++ DMYAKCG + A F ++ D+VSWN++I A S
Sbjct: 462 ELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSD 521
Query: 241 DANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYN 300
+ + AI IFRQM G+ D ++ + L AC + + + G IH +++K +V +
Sbjct: 522 NPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSES 581
Query: 301 SLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSEN- 359
+L+ MY KC NL A++VF+ + K N+VSWN+I++AC H + ++ LF +M+
Sbjct: 582 TLIDMYAKCGNLKAAMNVFKTM-KEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGI 640
Query: 360 KPNMITITNLLGTCAELASLEVGNQ-VHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQ 418
+P+ IT ++ +C + ++ G + + G+ ++D++ + G + A
Sbjct: 641 RPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAY 700
Query: 419 RVFDSTE-NPNVISWSSLI 436
S P+ W +L+
Sbjct: 701 ETVKSMPFPPDAGVWGTLL 719
Score = 199 bits (507), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 135/500 (27%), Positives = 252/500 (50%), Gaps = 12/500 (2%)
Query: 56 PDQLTFGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDV 115
P +L+ +++AC + G+Q+HA +I + G ++ MY G + +
Sbjct: 35 PRRLSL--LLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKM 92
Query: 116 FTMISIK--DLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSL 173
F + ++ + W+S+I F + G +AL + ML GV P+ + AC +L
Sbjct: 93 FYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGV-SPDVSTFPCLVKACVAL 151
Query: 174 LEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAII 233
+ + + G+ N F SL Y + G + F ++ D V WN ++
Sbjct: 152 KNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVML 211
Query: 234 AAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFN 293
+A G + I F M + P+++TF +L C S + ++ G+Q+H +V G +
Sbjct: 212 NGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVD 271
Query: 294 KEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQ 353
E ++ NSLL+MY+KC DA +F +S+ A+ V+WN ++S +Q E+ F +
Sbjct: 272 FEGSIKNSLLSMYSKCGRFDDASKLFRMMSR-ADTVTWNCMISGYVQSGLMEESLTFFYE 330
Query: 354 MLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGS 413
M+ S P+ IT ++LL + ++ +LE Q+HC+ ++ + LD+ +++ LID Y KC
Sbjct: 331 MISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRG 390
Query: 414 VIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSA 473
V AQ +F + +V+ ++++I GY +GL ++L +FR + + + PNE+T V +L
Sbjct: 391 VSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPV 450
Query: 474 CSHIGLVEEGWNLYNTMEEELGIPPAREHFSC-MVDLLARAGCLYEA-ETFIRKTGFDPD 531
+ ++ G L+ + ++ G R + C ++D+ A+ G + A E F R + D
Sbjct: 451 IGILLALKLGRELHGFIIKK-GF-DNRCNIGCAVIDMYAKCGRMNLAYEIFERLS--KRD 506
Query: 532 ITTWKTLLSSCKTHGNVDIA 551
I +W ++++ C N A
Sbjct: 507 IVSWNSMITRCAQSDNPSAA 526
Score = 102 bits (254), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 115/237 (48%), Gaps = 2/237 (0%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
MY KCG M A ++F+ + R++VSW SMI+ +Q+ + A+ ++ QM SG D ++
Sbjct: 485 MYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVS 544
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMIS 120
+ + AC G+ +H +IK + +++ LI MY G + A +VF +
Sbjct: 545 ISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMK 604
Query: 121 IKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYG- 179
K+++SW+S+I G ++L LF +M+ + +P++ + S+C + + + G
Sbjct: 605 EKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGV 664
Query: 180 RQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIE-SPDLVSWNAIIAA 235
R + +G+ + D++ + G L A + PD W ++ A
Sbjct: 665 RFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGA 721
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 376 bits (966), Expect = e-104, Method: Compositional matrix adjust.
Identities = 208/607 (34%), Positives = 325/607 (53%), Gaps = 70/607 (11%)
Query: 55 FPDQLTFGSIIKACCIA--GDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHA 112
F D F ++ +C + IY+ R +HA VIKSGF + QN LI Y+ G +
Sbjct: 16 FTDSSPFAKLLDSCIKSKLSAIYV-RYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDG 74
Query: 113 SDVFTMISIKDLISWSSMIRGFTQLGYEIEALYLFRDM---------------------- 150
VF + +++ +W+S++ G T+LG+ EA LFR M
Sbjct: 75 RQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCE 134
Query: 151 --------LRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFSGCSLC 202
+ + + NE+ SV SACS L + G Q+H + AK + +V+ G +L
Sbjct: 135 EALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALV 194
Query: 203 DMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSI 262
DMY+KCG + A+ F ++ ++VSWN++I F +G A EA+ +F+ M+ + PD +
Sbjct: 195 DMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEV 254
Query: 263 TFLSLLCACTSPMALNQGMQIHSYIVKVG-FNKEVALYNSLLTMYTKCSNLHDALSVFEA 321
T S++ AC S A+ G ++H +VK ++ L N+ + MY KCS + +A +F++
Sbjct: 255 TLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDS 314
Query: 322 I--------------------SKNA----------NLVSWNAILSACLQHKQAGETFRLF 351
+ +K A N+VSWNA+++ Q+ + E LF
Sbjct: 315 MPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLF 374
Query: 352 KQMLFSENKPNMITITNLLGTCAELASLEVGNQVHC------FSVKSGLVLDVSVSNGLI 405
+ P + N+L CA+LA L +G Q H F +SG D+ V N LI
Sbjct: 375 CLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLI 434
Query: 406 DMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEV 465
DMY KCG V VF + +SW+++I+G+A +G G+EAL LFR+M G +P+ +
Sbjct: 435 DMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHI 494
Query: 466 TYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRK 525
T +GVLSAC H G VEEG + +++M + G+ P R+H++CMVDLL RAG L EA++ I +
Sbjct: 495 TMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEE 554
Query: 526 TGFDPDITTWKTLLSSCKTHGNVDIAERAAENILKLDPSNSAALVLLSSIHASAGNWEDV 585
PD W +LL++CK H N+ + + AE +L+++PSNS VLLS+++A G WEDV
Sbjct: 555 MPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDV 614
Query: 586 AKLRKVL 592
+RK +
Sbjct: 615 MNVRKSM 621
Score = 228 bits (582), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 161/571 (28%), Positives = 272/571 (47%), Gaps = 90/571 (15%)
Query: 2 YGKCGSMKDARQVFDAMHLRNV-------------------------------VSWTSMI 30
Y KCGS++D RQVFD M RN+ +W SM+
Sbjct: 65 YSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMV 124
Query: 31 SGYSQNGQGNEAVVMYIQMLRSGFFPDQLTFGSIIKACCIAGDIYLGRQLHAHVIKSGFG 90
SG++Q+ + EA+ + M + GF ++ +F S++ AC D+ G Q+H+ + KS F
Sbjct: 125 SGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFL 184
Query: 91 GHLVAQNGLISMYTNFGQVAHASDVFTMISIKDLISWSSMIRGFTQLGYEIEALYLFRDM 150
+ + L+ MY+ G V A VF + ++++SW+S+I F Q G +EAL +F+ M
Sbjct: 185 SDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMM 244
Query: 151 LRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRN-VFSGCSLCDMYAKCG 209
L V +P+E L SV SAC+SL + G+++HG K +RN + + DMYAKC
Sbjct: 245 LESRV-EPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCS 303
Query: 210 FL-------------------------------PSAKTAFYQIESPDLVSWNAIIAAFAD 238
+ +A+ F ++ ++VSWNA+IA +
Sbjct: 304 RIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQ 363
Query: 239 SGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFN----- 293
+G+ EA+S+F + + P +F ++L AC L+ GMQ H +++K GF
Sbjct: 364 NGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGE 423
Query: 294 -KEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFK 352
++ + NSL+ MY KC + + VF + + + VSWNA++ Q+ E LF+
Sbjct: 424 EDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMER-DCVSWNAMIIGFAQNGYGNEALELFR 482
Query: 353 QMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVS------NGLID 406
+ML S KP+ IT+ +L C +E G H F S + D V+ ++D
Sbjct: 483 EMLESGEKPDHITMIGVLSACGHAGFVEEGR--HYF---SSMTRDFGVAPLRDHYTCMVD 537
Query: 407 MYAKCGSVIHAQRVFDSTE-NPNVISWSSLIVGYAMSGLGHEALNLFRKM--RNLGVRP- 462
+ + G + A+ + + P+ + W SL+ + H + L + + + L V P
Sbjct: 538 LLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKV----HRNITLGKYVAEKLLEVEPS 593
Query: 463 NEVTYVGVLSACSHIGLVEEGWNLYNTMEEE 493
N YV + + + +G E+ N+ +M +E
Sbjct: 594 NSGPYVLLSNMYAELGKWEDVMNVRKSMRKE 624
Score = 197 bits (501), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 119/381 (31%), Positives = 188/381 (49%), Gaps = 40/381 (10%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
MY KCG++ DA++VFD M RNVVSW S+I+ + QNG EA+ ++ ML S PD++T
Sbjct: 196 MYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVT 255
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSG-FGGHLVAQNGLISMYTNFGQVAHASDVFTMI 119
S+I AC I +G+++H V+K+ ++ N + MY ++ A +F +
Sbjct: 256 LASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSM 315
Query: 120 SIKDLI-------------------------------SWSSMIRGFTQLGYEIEALYLFR 148
I+++I SW+++I G+TQ G EAL LF
Sbjct: 316 PIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFC 375
Query: 149 DMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQI------HGICAKFGLVRNVFSGCSLC 202
+ R+ V P + ++ AC+ L E G Q HG + G ++F G SL
Sbjct: 376 LLKRESVC-PTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLI 434
Query: 203 DMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSI 262
DMY KCG + F ++ D VSWNA+I FA +G NEA+ +FR+M+ G PD I
Sbjct: 435 DMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHI 494
Query: 263 TFLSLLCACTSPMALNQGMQIHSYIVK-VGFNKEVALYNSLLTMYTKCSNLHDALSVFEA 321
T + +L AC + +G S + + G Y ++ + + L +A S+ E
Sbjct: 495 TMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEE 554
Query: 322 ISKNANLVSWNAILSACLQHK 342
+ + V W ++L+AC H+
Sbjct: 555 MPMQPDSVIWGSLLAACKVHR 575
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 376 bits (966), Expect = e-104, Method: Compositional matrix adjust.
Identities = 209/594 (35%), Positives = 324/594 (54%), Gaps = 9/594 (1%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
M G G++ A +FD M R+ +SW S+ + Y+QNG E+ ++ M R F D++
Sbjct: 187 MLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRR---FHDEVN 243
Query: 61 FGSIIKACCIAGDI---YLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFT 117
++ + G + GR +H V+K GF + N L+ MY G+ A+ VF
Sbjct: 244 STTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFK 303
Query: 118 MISIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPE 177
+ KDLISW+S++ F G ++AL L M+ G N S +AC + E
Sbjct: 304 QMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSG-KSVNYVTFTSALAACFTPDFFE 362
Query: 178 YGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFA 237
GR +HG+ GL N G +L MY K G + ++ Q+ D+V+WNA+I +A
Sbjct: 363 KGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYA 422
Query: 238 DSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMAL-NQGMQIHSYIVKVGFNKEV 296
+ D ++A++ F+ M G+ + IT +S+L AC P L +G +H+YIV GF +
Sbjct: 423 EDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDE 482
Query: 297 ALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLF 356
+ NSL+TMY KC +L + +F + N N+++WNA+L+A H E +L +M
Sbjct: 483 HVKNSLITMYAKCGDLSSSQDLFNGLD-NRNIITWNAMLAANAHHGHGEEVLKLVSKMRS 541
Query: 357 SENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIH 416
+ + + L A+LA LE G Q+H +VK G D + N DMY+KCG +
Sbjct: 542 FGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGE 601
Query: 417 AQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSH 476
++ + N ++ SW+ LI G E F +M +G++P VT+V +L+ACSH
Sbjct: 602 VVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSH 661
Query: 477 IGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWK 536
GLV++G Y+ + + G+ PA EH C++DLL R+G L EAETFI K P+ W+
Sbjct: 662 GGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWR 721
Query: 537 TLLSSCKTHGNVDIAERAAENILKLDPSNSAALVLLSSIHASAGNWEDVAKLRK 590
+LL+SCK HGN+D +AAEN+ KL+P + + VL S++ A+ G WEDV +RK
Sbjct: 722 SLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRK 775
Score = 273 bits (697), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 164/547 (29%), Positives = 285/547 (52%), Gaps = 5/547 (0%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
+YG G + +R+VF+ M RNVVSWTS++ GYS G+ E + +Y M G ++ +
Sbjct: 86 LYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENS 145
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMIS 120
+I +C + D LGRQ+ V+KSG L +N LISM + G V +A+ +F +S
Sbjct: 146 MSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMS 205
Query: 121 IKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGR 180
+D ISW+S+ + Q G+ E+ +F ++R+ + N + ++ S + ++GR
Sbjct: 206 ERDTISWNSIAAAYAQNGHIEESFRIF-SLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGR 264
Query: 181 QIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSG 240
IHG+ K G V +L MYA G A F Q+ + DL+SWN+++A+F + G
Sbjct: 265 GIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDG 324
Query: 241 DANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYN 300
+ +A+ + M+ G + +TF S L AC +P +G +H +V G + N
Sbjct: 325 RSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGN 384
Query: 301 SLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENK 360
+L++MY K + ++ V + + ++V+WNA++ + + + F+ M
Sbjct: 385 ALVSMYGKIGEMSESRRVLLQMPRR-DVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVS 443
Query: 361 PNMITITNLLGTCAELAS-LEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQR 419
N IT+ ++L C LE G +H + V +G D V N LI MYAKCG + +Q
Sbjct: 444 SNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQD 503
Query: 420 VFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGL 479
+F+ +N N+I+W++++ A G G E L L KMR+ GV ++ ++ LSA + + +
Sbjct: 504 LFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAV 563
Query: 480 VEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTLL 539
+EEG L+ + +LG F+ D+ ++ G + E + + + + +W L+
Sbjct: 564 LEEGQQLHG-LAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPS-VNRSLPSWNILI 621
Query: 540 SSCKTHG 546
S+ HG
Sbjct: 622 SALGRHG 628
Score = 223 bits (568), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 163/547 (29%), Positives = 264/547 (48%), Gaps = 15/547 (2%)
Query: 18 MHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTFGSIIKACCIAGDIYL- 76
M +RN VSW +M+SG + G E + + +M G P S++ AC +G ++
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE 60
Query: 77 GRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIKDLISWSSMIRGFTQ 136
G Q+H V KSG + ++ +Y +G V+ + VF + ++++SW+S++ G++
Sbjct: 61 GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSD 120
Query: 137 LGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVF 196
G E + +++ M +GV NE + V S+C L + GRQI G K GL +
Sbjct: 121 KGEPEEVIDIYKGMRGEGV-GCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLA 179
Query: 197 SGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIG 256
SL M G + A F Q+ D +SWN+I AA+A +G E+ IF M
Sbjct: 180 VENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFH 239
Query: 257 LIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDAL 316
+S T +LL G IH +VK+GF+ V + N+LL MY +A
Sbjct: 240 DEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEAN 299
Query: 317 SVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAEL 376
VF+ + +L+SWN+++++ + ++ + L M+ S N +T T+ L C
Sbjct: 300 LVFKQMP-TKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTP 358
Query: 377 ASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLI 436
E G +H V SGL + + N L+ MY K G + ++RV +V++W++LI
Sbjct: 359 DFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALI 418
Query: 437 VGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIG-LVEEGWNLYNTMEEELG 495
GYA +AL F+ MR GV N +T V VLSAC G L+E G L+ + G
Sbjct: 419 GGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSA-G 477
Query: 496 IPPAREHFSCMVDLLARAGCLYEAETFIRKTGFD-PDITTWKTLLSSCKTHGNVDIAERA 554
+ ++ + A+ G L ++ G D +I TW +L++ HG+
Sbjct: 478 FESDEHVKNSLITMYAKCGDLSSSQDLF--NGLDNRNIITWNAMLAANAHHGH------- 528
Query: 555 AENILKL 561
E +LKL
Sbjct: 529 GEEVLKL 535
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 375 bits (964), Expect = e-104, Method: Compositional matrix adjust.
Identities = 209/594 (35%), Positives = 324/594 (54%), Gaps = 9/594 (1%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
M G G++ A +FD M R+ +SW S+ + Y+QNG E+ ++ M R F D++
Sbjct: 204 MLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRR---FHDEVN 260
Query: 61 FGSIIKACCIAGDI---YLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFT 117
++ + G + GR +H V+K GF + N L+ MY G+ A+ VF
Sbjct: 261 STTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFK 320
Query: 118 MISIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPE 177
+ KDLISW+S++ F G ++AL L M+ G N S +AC + E
Sbjct: 321 QMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSG-KSVNYVTFTSALAACFTPDFFE 379
Query: 178 YGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFA 237
GR +HG+ GL N G +L MY K G + ++ Q+ D+V+WNA+I +A
Sbjct: 380 KGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYA 439
Query: 238 DSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMAL-NQGMQIHSYIVKVGFNKEV 296
+ D ++A++ F+ M G+ + IT +S+L AC P L +G +H+YIV GF +
Sbjct: 440 EDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDE 499
Query: 297 ALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLF 356
+ NSL+TMY KC +L + +F + N N+++WNA+L+A H E +L +M
Sbjct: 500 HVKNSLITMYAKCGDLSSSQDLFNGLD-NRNIITWNAMLAANAHHGHGEEVLKLVSKMRS 558
Query: 357 SENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIH 416
+ + + L A+LA LE G Q+H +VK G D + N DMY+KCG +
Sbjct: 559 FGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGE 618
Query: 417 AQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSH 476
++ + N ++ SW+ LI G E F +M +G++P VT+V +L+ACSH
Sbjct: 619 VVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSH 678
Query: 477 IGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWK 536
GLV++G Y+ + + G+ PA EH C++DLL R+G L EAETFI K P+ W+
Sbjct: 679 GGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWR 738
Query: 537 TLLSSCKTHGNVDIAERAAENILKLDPSNSAALVLLSSIHASAGNWEDVAKLRK 590
+LL+SCK HGN+D +AAEN+ KL+P + + VL S++ A+ G WEDV +RK
Sbjct: 739 SLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRK 792
Score = 272 bits (696), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 164/547 (29%), Positives = 285/547 (52%), Gaps = 5/547 (0%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
+YG G + +R+VF+ M RNVVSWTS++ GYS G+ E + +Y M G ++ +
Sbjct: 103 LYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENS 162
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMIS 120
+I +C + D LGRQ+ V+KSG L +N LISM + G V +A+ +F +S
Sbjct: 163 MSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMS 222
Query: 121 IKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGR 180
+D ISW+S+ + Q G+ E+ +F ++R+ + N + ++ S + ++GR
Sbjct: 223 ERDTISWNSIAAAYAQNGHIEESFRIF-SLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGR 281
Query: 181 QIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSG 240
IHG+ K G V +L MYA G A F Q+ + DL+SWN+++A+F + G
Sbjct: 282 GIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDG 341
Query: 241 DANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYN 300
+ +A+ + M+ G + +TF S L AC +P +G +H +V G + N
Sbjct: 342 RSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGN 401
Query: 301 SLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENK 360
+L++MY K + ++ V + + ++V+WNA++ + + + F+ M
Sbjct: 402 ALVSMYGKIGEMSESRRVLLQMPRR-DVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVS 460
Query: 361 PNMITITNLLGTCAELAS-LEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQR 419
N IT+ ++L C LE G +H + V +G D V N LI MYAKCG + +Q
Sbjct: 461 SNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQD 520
Query: 420 VFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGL 479
+F+ +N N+I+W++++ A G G E L L KMR+ GV ++ ++ LSA + + +
Sbjct: 521 LFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAV 580
Query: 480 VEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTLL 539
+EEG L+ + +LG F+ D+ ++ G + E + + + + +W L+
Sbjct: 581 LEEGQQLHG-LAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPS-VNRSLPSWNILI 638
Query: 540 SSCKTHG 546
S+ HG
Sbjct: 639 SALGRHG 645
Score = 241 bits (614), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 172/564 (30%), Positives = 275/564 (48%), Gaps = 15/564 (2%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
MY K G +K AR +FD M +RN VSW +M+SG + G E + + +M G P
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60
Query: 61 FGSIIKACCIAGDIYL-GRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMI 119
S++ AC +G ++ G Q+H V KSG + ++ +Y +G V+ + VF +
Sbjct: 61 IASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEM 120
Query: 120 SIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYG 179
++++SW+S++ G++ G E + +++ M +GV NE + V S+C L + G
Sbjct: 121 PDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGV-GCNENSMSLVISSCGLLKDESLG 179
Query: 180 RQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADS 239
RQI G K GL + SL M G + A F Q+ D +SWN+I AA+A +
Sbjct: 180 RQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQN 239
Query: 240 GDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALY 299
G E+ IF M +S T +LL G IH +VK+GF+ V +
Sbjct: 240 GHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVC 299
Query: 300 NSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSEN 359
N+LL MY +A VF+ + +L+SWN+++++ + ++ + L M+ S
Sbjct: 300 NTLLRMYAGAGRSVEANLVFKQMP-TKDLISWNSLMASFVNDGRSLDALGLLCSMISSGK 358
Query: 360 KPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQR 419
N +T T+ L C E G +H V SGL + + N L+ MY K G + ++R
Sbjct: 359 SVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRR 418
Query: 420 VFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIG- 478
V +V++W++LI GYA +AL F+ MR GV N +T V VLSAC G
Sbjct: 419 VLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGD 478
Query: 479 LVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFD-PDITTWKT 537
L+E G L+ + G + ++ + A+ G L ++ G D +I TW
Sbjct: 479 LLERGKPLHAYIVSA-GFESDEHVKNSLITMYAKCGDLSSSQDLF--NGLDNRNIITWNA 535
Query: 538 LLSSCKTHGNVDIAERAAENILKL 561
+L++ HG+ E +LKL
Sbjct: 536 MLAANAHHGH-------GEEVLKL 552
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 375 bits (963), Expect = e-104, Method: Compositional matrix adjust.
Identities = 200/599 (33%), Positives = 340/599 (56%), Gaps = 10/599 (1%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
+Y K G + A+ +FD M R+ V W ++I GYS+NG +A ++I ML+ GF P T
Sbjct: 94 LYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFSPSATT 153
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMIS 120
+++ C G + GR +H KSG +N LIS Y+ ++ A +F +
Sbjct: 154 LVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFREMK 213
Query: 121 IKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGR 180
K +SW++MI ++Q G + EA+ +F++M + V + + + ++ SA S EP
Sbjct: 214 DKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNV-EISPVTIINLLSAHVSH-EP---- 267
Query: 181 QIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSG 240
+H + K G+V ++ SL Y++CG L SA+ + + +V +I++ +A+ G
Sbjct: 268 -LHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKG 326
Query: 241 DANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYN 300
D + A+ F + + + D++ + +L C ++ GM +H Y +K G + + N
Sbjct: 327 DMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVN 386
Query: 301 SLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENK 360
L+TMY+K ++ L +FE + + L+SWN+++S C+Q +A F +F QM+ +
Sbjct: 387 GLITMYSKFDDVETVLFLFEQLQETP-LISWNSVISGCVQSGRASTAFEVFHQMMLTGGL 445
Query: 361 -PNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQR 419
P+ ITI +LL C++L L +G ++H +++++ + V LIDMYAKCG+ + A+
Sbjct: 446 LPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAES 505
Query: 420 VFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGL 479
VF S + P +W+S+I GY++SGL H AL+ + +MR G++P+E+T++GVLSAC+H G
Sbjct: 506 VFKSIKAPCTATWNSMISGYSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSACNHGGF 565
Query: 480 VEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTLL 539
V+EG + M +E GI P +H++ MV LL RA EA I K PD W LL
Sbjct: 566 VDEGKICFRAMIKEFGISPTLQHYALMVGLLGRACLFTEALYLIWKMDIKPDSAVWGALL 625
Query: 540 SSCKTHGNVDIAERAAENILKLDPSNSAALVLLSSIHASAGNWEDVAKLRKVL-DDGYD 597
S+C H +++ E A + LD N VL+S+++A+ W+DV ++R ++ D+GYD
Sbjct: 626 SACIIHRELEVGEYVARKMFMLDYKNGGLYVLMSNLYATEAMWDDVVRVRNMMKDNGYD 684
Score = 197 bits (501), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 141/530 (26%), Positives = 258/530 (48%), Gaps = 27/530 (5%)
Query: 21 RNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTFGSIIKACCIAGDIYLGR-- 78
R++ + S++ + + ++ +LRS P+ T ++A + + + +
Sbjct: 11 RDLSYFHSLLKSCIHGEISSSPITIFRDLLRSSLTPNHFTMSIFLQATTTSFNSFKLQVE 70
Query: 79 QLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIKDLISWSSMIRGFTQLG 138
Q+ H+ KSG + + L+++Y G V A +F + +D + W+++I G+++ G
Sbjct: 71 QVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNG 130
Query: 139 YEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFSG 198
YE +A LF ML+QG + P+ L ++ C GR +HG+ AK GL +
Sbjct: 131 YECDAWKLFIVMLQQG-FSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVK 189
Query: 199 CSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLI 258
+L Y+KC L SA+ F +++ VSWN +I A++ SG EAI++F+ M +
Sbjct: 190 NALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVE 249
Query: 259 PDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSV 318
+T ++LL A S L H +VK G ++++ SL+ Y++C L A +
Sbjct: 250 ISPVTIINLLSAHVSHEPL------HCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERL 303
Query: 319 FEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELAS 378
+ A +K ++V +I+S + F + K + + + +L C + +
Sbjct: 304 Y-ASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSH 362
Query: 379 LEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVG 438
+++G +H +++KSGL V NGLI MY+K V +F+ + +ISW+S+I G
Sbjct: 363 IDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISG 422
Query: 439 YAMSGLGHEALNLFRKMR-NLGVRPNEVTYVGVLSACSH-----IGLVEEGWNLYNTMEE 492
SG A +F +M G+ P+ +T +L+ CS +G G+ L N E
Sbjct: 423 CVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFE- 481
Query: 493 ELGIPPAREHFSC--MVDLLARAGCLYEAETFIRKTGFDPDITTWKTLLS 540
E+F C ++D+ A+ G +AE+ + K+ P TW +++S
Sbjct: 482 -------NENFVCTALIDMYAKCGNEVQAES-VFKSIKAPCTATWNSMIS 523
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 122/266 (45%), Gaps = 5/266 (1%)
Query: 316 LSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLL-GTCA 374
+ + + I+ +L ++++L +C+ + + +F+ +L S PN T++ L T
Sbjct: 1 MRITKPITLYRDLSYFHSLLKSCIHGEISSSPITIFRDLLRSSLTPNHFTMSIFLQATTT 60
Query: 375 ELASLEVG-NQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWS 433
S ++ QV KSGL V V L+++Y K G V AQ +FD + + W+
Sbjct: 61 SFNSFKLQVEQVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWN 120
Query: 434 SLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEE 493
+LI GY+ +G +A LF M G P+ T V +L C G V +G +++ +
Sbjct: 121 ALICGYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKS 180
Query: 494 LGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTLLSSCKTHGNVDIAER 553
G+ + + ++ ++ L AE R+ D +W T++ + G + A
Sbjct: 181 -GLELDSQVKNALISFYSKCAELGSAEVLFREMK-DKSTVSWNTMIGAYSQSGLQEEAIT 238
Query: 554 AAENILKLDPSNSAALVL-LSSIHAS 578
+N+ + + S ++ L S H S
Sbjct: 239 VFKNMFEKNVEISPVTIINLLSAHVS 264
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 372 bits (955), Expect = e-103, Method: Compositional matrix adjust.
Identities = 213/593 (35%), Positives = 337/593 (56%), Gaps = 6/593 (1%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
+Y KCG M +A +VF + +VVSWT M+SGY+++ A+ ++ +M SG + T
Sbjct: 294 LYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCT 353
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFT-MI 119
S+I AC + Q+HA V KSGF LISMY+ G + + VF +
Sbjct: 354 VTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLD 413
Query: 120 SIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYG 179
I+ + MI F+Q +A+ LF ML++G+ + +EF + S+ S L G
Sbjct: 414 DIQRQNIVNVMITSFSQSKKPGKAIRLFTRMLQEGL-RTDEFSVCSLLSVLDCL---NLG 469
Query: 180 RQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADS 239
+Q+HG K GLV ++ G SL +Y+KCG L + F I D W ++I+ F +
Sbjct: 470 KQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEY 529
Query: 240 GDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALY 299
G EAI +F +M+ G PD T ++L C+S +L +G +IH Y ++ G +K + L
Sbjct: 530 GYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLG 589
Query: 300 NSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSEN 359
++L+ MY+KC +L A V++ + + + VS ++++S QH + F LF+ M+ S
Sbjct: 590 SALVNMYSKCGSLKLARQVYDRLPE-LDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGF 648
Query: 360 KPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQR 419
+ I+++L A +G QVH + K GL + SV + L+ MY+K GS+ +
Sbjct: 649 TMDSFAISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCK 708
Query: 420 VFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGL 479
F P++I+W++LI YA G +EAL ++ M+ G +P++VT+VGVLSACSH GL
Sbjct: 709 AFSQINGPDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGL 768
Query: 480 VEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTLL 539
VEE + N+M ++ GI P H+ CMVD L R+G L EAE+FI PD W TLL
Sbjct: 769 VEESYFHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMHIKPDALVWGTLL 828
Query: 540 SSCKTHGNVDIAERAAENILKLDPSNSAALVLLSSIHASAGNWEDVAKLRKVL 592
++CK HG V++ + AA+ ++L+PS++ A + LS+I A G W++V + RK++
Sbjct: 829 AACKIHGEVELGKVAAKKAIELEPSDAGAYISLSNILAEVGEWDEVEETRKLM 881
Score = 253 bits (645), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 161/548 (29%), Positives = 288/548 (52%), Gaps = 13/548 (2%)
Query: 2 YGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTF 61
Y GSM DA ++FD + +VVS MISGY Q+ E++ + +M GF +++++
Sbjct: 94 YSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMHFLGFEANEISY 153
Query: 62 GSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISI 121
GS+I AC + H IK G+ + V ++ LI +++ + A VF
Sbjct: 154 GSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLRFEDAYKVFRDSLS 213
Query: 122 KDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQ 181
++ W+++I G + LF +M G +P+ + SV +AC+SL + +G+
Sbjct: 214 ANVYCWNTIIAGALRNQNYGAVFDLFHEMC-VGFQKPDSYTYSSVLAACASLEKLRFGKV 272
Query: 182 IHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGD 241
+ K G +VF ++ D+YAKCG + A F +I +P +VSW +++ + S D
Sbjct: 273 VQARVIKCG-AEDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSND 331
Query: 242 ANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNS 301
A A+ IF++M H G+ ++ T S++ AC P + + Q+H+++ K GF + ++ +
Sbjct: 332 AFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAA 391
Query: 302 LLTMYTKCSNLHDALSVFEAIS--KNANLVSWNAILSACLQHKQAGETFRLFKQMLFSEN 359
L++MY+K ++ + VFE + + N+V N ++++ Q K+ G+ RLF +ML
Sbjct: 392 LISMYSKSGDIDLSEQVFEDLDDIQRQNIV--NVMITSFSQSKKPGKAIRLFTRMLQEGL 449
Query: 360 KPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQR 419
+ + ++ +LL L L +G QVH +++KSGLVLD++V + L +Y+KCGS+ + +
Sbjct: 450 RTDEFSVCSLLSV---LDCLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYK 506
Query: 420 VFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGL 479
+F + W+S+I G+ G EA+ LF +M + G P+E T VL+ CS
Sbjct: 507 LFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPS 566
Query: 480 VEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEA-ETFIRKTGFDPDITTWKTL 538
+ G ++ GI + S +V++ ++ G L A + + R DP + +L
Sbjct: 567 LPRGKEIHGYTLRA-GIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPELDP--VSCSSL 623
Query: 539 LSSCKTHG 546
+S HG
Sbjct: 624 ISGYSQHG 631
Score = 208 bits (530), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 160/609 (26%), Positives = 288/609 (47%), Gaps = 20/609 (3%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
++ K +DA +VF NV W ++I+G +N ++ +M PD T
Sbjct: 194 VFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYT 253
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMIS 120
+ S++ AC + G+ + A VIK G V ++ +Y G +A A +VF+ I
Sbjct: 254 YSSVLAACASLEKLRFGKVVQARVIKCGAEDVFVC-TAIVDLYAKCGHMAEAMEVFSRIP 312
Query: 121 IKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGR 180
++SW+ M+ G+T+ AL +F++M GV + N + SV SAC
Sbjct: 313 NPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGV-EINNCTVTSVISACGRPSMVCEAS 371
Query: 181 QIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFY---QIESPDLVSWNAIIAAFA 237
Q+H K G + +L MY+K G + ++ F I+ ++V N +I +F+
Sbjct: 372 QVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV--NVMITSFS 429
Query: 238 DSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVA 297
S +AI +F +M+ GL D + SLL LN G Q+H Y +K G ++
Sbjct: 430 QSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLD---CLNLGKQVHGYTLKSGLVLDLT 486
Query: 298 LYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFS 357
+ +SL T+Y+KC +L ++ +F+ I N W +++S ++ E LF +ML
Sbjct: 487 VGSSLFTLYSKCGSLEESYKLFQGIPFKDN-ACWASMISGFNEYGYLREAIGLFSEMLDD 545
Query: 358 ENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHA 417
P+ T+ +L C+ SL G ++H +++++G+ + + + L++MY+KCGS+ A
Sbjct: 546 GTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLA 605
Query: 418 QRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHI 477
++V+D + +S SSLI GY+ GL + LFR M G + +L A +
Sbjct: 606 RQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALS 665
Query: 478 GLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYE-AETFIRKTGFDPDITTWK 536
G ++ + ++G+ S ++ + ++ G + + + F + G PD+ W
Sbjct: 666 DESSLGAQVHAYI-TKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQING--PDLIAWT 722
Query: 537 TLLSSCKTHGNVDIAERAAENILK---LDPSNSAALVLLSSIHASAGNWEDVAKLRKVLD 593
L++S HG + A + N++K P + +LS+ E L ++
Sbjct: 723 ALIASYAQHGKANEALQVY-NLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMVK 781
Query: 594 D-GYDPAQR 601
D G +P R
Sbjct: 782 DYGIEPENR 790
Score = 159 bits (401), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 108/408 (26%), Positives = 191/408 (46%), Gaps = 36/408 (8%)
Query: 188 KFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAIS 247
++ L +VF SL Y+ G + A F I PD+VS N +I+ + E++
Sbjct: 77 RYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLR 136
Query: 248 IFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYT 307
F +M +G + I++ S++ AC++ A + + +K+G+ + ++L+ +++
Sbjct: 137 FFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFS 196
Query: 308 KCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITIT 367
K DA VF S +AN+ WN I++ L+++ G F LF +M KP+ T +
Sbjct: 197 KNLRFEDAYKVFRD-SLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYS 255
Query: 368 NLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENP 427
++L CA L L G V +K G DV V ++D+YAKCG + A VF NP
Sbjct: 256 SVLAACASLEKLRFGKVVQARVIKCG-AEDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNP 314
Query: 428 NVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLY 487
+V+SW+ ++ GY S AL +F++MR+ GV N T V+SAC +V E ++
Sbjct: 315 SVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVH 374
Query: 488 NTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTLLSSCKTHGN 547
++ K+GF D + L+S G+
Sbjct: 375 ---------------------------------AWVFKSGFYLDSSVAAALISMYSKSGD 401
Query: 548 VDIAERAAENILKLDPSNSAALVLLSSIHASAGNWEDVAKLRKVLDDG 595
+D++E+ E++ + N V+++S S + + ++L +G
Sbjct: 402 IDLSEQVFEDLDDIQRQNIVN-VMITSFSQSKKPGKAIRLFTRMLQEG 448
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 371 bits (952), Expect = e-103, Method: Compositional matrix adjust.
Identities = 198/595 (33%), Positives = 336/595 (56%), Gaps = 8/595 (1%)
Query: 2 YGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTF 61
Y K + KD R+VFD M RNVV+WT++ISGY++N +E + ++++M G P+ TF
Sbjct: 138 YMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTF 197
Query: 62 GSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISI 121
+ + G G Q+H V+K+G + N LI++Y G V A +F +
Sbjct: 198 AAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEV 257
Query: 122 KDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQ 181
K +++W+SMI G+ G ++EAL +F M R + +E SV C++L E + Q
Sbjct: 258 KSVVTWNSMISGYAANGLDLEALGMFYSM-RLNYVRLSESSFASVIKLCANLKELRFTEQ 316
Query: 182 IHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIES-PDLVSWNAIIAAFADSG 240
+H K+G + + +L Y+KC + A F +I ++VSW A+I+ F +
Sbjct: 317 LHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQND 376
Query: 241 DANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYN 300
EA+ +F +M G+ P+ T+ +L A + + ++H+ +VK + + +
Sbjct: 377 GKEEAVDLFSEMKRKGVRPNEFTYSVILTA----LPVISPSEVHAQVVKTNYERSSTVGT 432
Query: 301 SLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENK 360
+LL Y K + +A VF I + ++V+W+A+L+ Q + ++F ++ K
Sbjct: 433 ALLDAYVKLGKVEEAAKVFSGID-DKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIK 491
Query: 361 PNMITITNLLGTCAEL-ASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQR 419
PN T +++L CA AS+ G Q H F++KS L + VS+ L+ MYAK G++ A+
Sbjct: 492 PNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEE 551
Query: 420 VFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGL 479
VF +++SW+S+I GYA G +AL++F++M+ V+ + VT++GV +AC+H GL
Sbjct: 552 VFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGL 611
Query: 480 VEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTLL 539
VEEG ++ M + I P +EH SCMVDL +RAG L +A I T W+T+L
Sbjct: 612 VEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTIL 671
Query: 540 SSCKTHGNVDIAERAAENILKLDPSNSAALVLLSSIHASAGNWEDVAKLRKVLDD 594
++C+ H ++ AAE I+ + P +SAA VLLS+++A +G+W++ AK+RK++++
Sbjct: 672 AACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNE 726
Score = 243 bits (620), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 151/563 (26%), Positives = 276/563 (49%), Gaps = 22/563 (3%)
Query: 10 DARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTFGSIIKACC 69
+A +FD R+ S+ S++ G+S++G+ EA +++ + R G D F S++K
Sbjct: 45 NAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSA 104
Query: 70 IAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIKDLISWSS 129
D GRQLH IK GF + L+ Y VF + +++++W++
Sbjct: 105 TLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTT 164
Query: 130 MIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKF 189
+I G+ + E L LF M +G QPN F + + G Q+H + K
Sbjct: 165 LISGYARNSMNDEVLTLFMRMQNEGT-QPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKN 223
Query: 190 GLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIF 249
GL + + SL ++Y KCG + A+ F + E +V+WN++I+ +A +G EA+ +F
Sbjct: 224 GLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMF 283
Query: 250 RQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKC 309
M + +F S++ C + L Q+H +VK GF + + +L+ Y+KC
Sbjct: 284 YSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKC 343
Query: 310 SNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNL 369
+ + DAL +F+ I N+VSW A++S LQ+ E LF +M +PN T + +
Sbjct: 344 TAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVI 403
Query: 370 LGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNV 429
L ++ EV QV VK+ +V L+D Y K G V A +VF ++ ++
Sbjct: 404 LTALPVISPSEVHAQV----VKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDI 459
Query: 430 ISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHI------GLVEEG 483
++WS+++ GYA +G A+ +F ++ G++PNE T+ +L+ C+ G G
Sbjct: 460 VAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHG 519
Query: 484 WNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTLLSSCK 543
+ + + ++ L + S ++ + A+ G + AE ++ + D+ +W +++S
Sbjct: 520 FAIKSRLDSSLCVS------SALLTMYAKKGNIESAEEVFKRQR-EKDLVSWNSMISGYA 572
Query: 544 THGN----VDIAERAAENILKLD 562
HG +D+ + + +K+D
Sbjct: 573 QHGQAMKALDVFKEMKKRKVKMD 595
Score = 227 bits (578), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 133/430 (30%), Positives = 228/430 (53%), Gaps = 9/430 (2%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
+Y KCG+++ AR +FD +++VV+W SMISGY+ NG EA+ M+ M + + +
Sbjct: 238 LYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESS 297
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMIS 120
F S+IK C ++ QLH V+K GF + L+ Y+ + A +F I
Sbjct: 298 FASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIG 357
Query: 121 -IKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYG 179
+ +++SW++MI GF Q + EA+ LF +M R+GV +PNEF + +A ++ P
Sbjct: 358 CVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGV-RPNEFTYSVILTAL-PVISPS-- 413
Query: 180 RQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADS 239
++H K R+ G +L D Y K G + A F I+ D+V+W+A++A +A +
Sbjct: 414 -EVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQT 472
Query: 240 GDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMA-LNQGMQIHSYIVKVGFNKEVAL 298
G+ AI +F ++ G+ P+ TF S+L C + A + QG Q H + +K + + +
Sbjct: 473 GETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCV 532
Query: 299 YNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSE 358
++LLTMY K N+ A VF+ + +LVSWN+++S QH QA + +FK+M +
Sbjct: 533 SSALLTMYAKKGNIESAEEVFKR-QREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRK 591
Query: 359 NKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNG-LIDMYAKCGSVIHA 417
K + +T + C +E G + V+ + N ++D+Y++ G + A
Sbjct: 592 VKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKA 651
Query: 418 QRVFDSTENP 427
+V ++ NP
Sbjct: 652 MKVIENMPNP 661
Score = 199 bits (505), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 126/452 (27%), Positives = 229/452 (50%), Gaps = 14/452 (3%)
Query: 106 FGQVA-----HASDVFTMISIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNE 160
FG V+ +A ++F +D S+ S++ GF++ G EA LF ++ R G+ + +
Sbjct: 35 FGTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGM-EMDC 93
Query: 161 FVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQ 220
+ SV ++L + +GRQ+H C KFG + +V G SL D Y K + F +
Sbjct: 94 SIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDE 153
Query: 221 IESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQG 280
++ ++V+W +I+ +A + +E +++F +M + G P+S TF + L +G
Sbjct: 154 MKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRG 213
Query: 281 MQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQ 340
+Q+H+ +VK G +K + + NSL+ +Y KC N+ A +F+ ++ ++V+WN+++S
Sbjct: 214 LQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDK-TEVKSVVTWNSMISGYAA 272
Query: 341 HKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSV 400
+ E +F M + + + + +++ CA L L Q+HC VK G + D ++
Sbjct: 273 NGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNI 332
Query: 401 SNGLIDMYAKCGSVIHAQRVFDSTE-NPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLG 459
L+ Y+KC +++ A R+F NV+SW+++I G+ + EA++LF +M+ G
Sbjct: 333 RTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKG 392
Query: 460 VRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEA 519
VRPNE TY +L+A I E + T E + ++D + G + EA
Sbjct: 393 VRPNEFTYSVILTALPVISPSEVHAQVVKTNYERSSTVG-----TALLDAYVKLGKVEEA 447
Query: 520 ETFIRKTGFDPDITTWKTLLSSCKTHGNVDIA 551
D DI W +L+ G + A
Sbjct: 448 AKVFSGID-DKDIVAWSAMLAGYAQTGETEAA 478
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 369 bits (948), Expect = e-102, Method: Compositional matrix adjust.
Identities = 195/584 (33%), Positives = 324/584 (55%), Gaps = 5/584 (0%)
Query: 12 RQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTFGSIIKACCIA 71
R+++ L +V +W I E+++++ +M R GF P+ TF + KAC
Sbjct: 6 RRLYRISGLSSVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARL 65
Query: 72 GDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIKDLISWSSMI 131
D+ +HAH+IKS F + + M+ V +A+ VF + +D +W++M+
Sbjct: 66 ADVGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAML 125
Query: 132 RGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGL 191
GF Q G+ +A LFR+M R P+ + ++ + S + +H + + G+
Sbjct: 126 SGFCQSGHTDKAFSLFREM-RLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGV 184
Query: 192 VRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPD--LVSWNAIIAAFADSGDANEAISIF 249
V + Y KCG L SAK F I+ D +VSWN++ A++ G+A +A ++
Sbjct: 185 DVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLY 244
Query: 250 RQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKC 309
M+ PD TF++L +C +P L QG IHS+ + +G ++++ N+ ++MY+K
Sbjct: 245 CLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKS 304
Query: 310 SNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNL 369
+ A +F+ I + VSW ++S + E LF M+ S KP+++T+ +L
Sbjct: 305 EDTCSARLLFD-IMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSL 363
Query: 370 LGTCAELASLEVGNQVHCFSVKSGLVLD-VSVSNGLIDMYAKCGSVIHAQRVFDSTENPN 428
+ C + SLE G + + G D V + N LIDMY+KCGS+ A+ +FD+T
Sbjct: 364 ISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKT 423
Query: 429 VISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYN 488
V++W+++I GYA++G+ EAL LF KM +L +PN +T++ VL AC+H G +E+GW ++
Sbjct: 424 VVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFH 483
Query: 489 TMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTLLSSCKTHGNV 548
M++ I P +H+SCMVDLL R G L EA IR PD W LL++CK H NV
Sbjct: 484 IMKQVYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNACKIHRNV 543
Query: 549 DIAERAAENILKLDPSNSAALVLLSSIHASAGNWEDVAKLRKVL 592
IAE+AAE++ L+P +A V +++I+A+AG W+ A++R ++
Sbjct: 544 KIAEQAAESLFNLEPQMAAPYVEMANIYAAAGMWDGFARIRSIM 587
Score = 180 bits (456), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 133/520 (25%), Positives = 248/520 (47%), Gaps = 46/520 (8%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
M+ KC S+ A +VF+ M R+ +W +M+SG+ Q+G ++A ++ +M + PD +T
Sbjct: 96 MFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVT 155
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMIS 120
++I++ + L +HA I+ G + N IS Y G + A VF I
Sbjct: 156 VMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAID 215
Query: 121 IKD--LISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEY 178
D ++SW+SM + ++ G +A L+ MLR+ ++P+ ++ ++C +
Sbjct: 216 RGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREE-FKPDLSTFINLAASCQNPETLTQ 274
Query: 179 GRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFAD 238
GR IH G +++ + + MY+K SA+ F + S VSW +I+ +A+
Sbjct: 275 GRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAE 334
Query: 239 SGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKE-VA 297
GD +EA+++F M+ G PD +T LSL+ C +L G I + G ++ V
Sbjct: 335 KGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVM 394
Query: 298 LYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFS 357
+ N+L+ MY+KC ++H+A +F+ + +V+W +++ + E +LF +M+
Sbjct: 395 ICNALIDMYSKCGSIHEARDIFDN-TPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDL 453
Query: 358 ENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHA 417
+ KPN IT +L CA SLE G + F +
Sbjct: 454 DYKPNHITFLAVLQACAHSGSLEKGWEY--FHI--------------------------M 485
Query: 418 QRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACS-- 475
++V++ + P + +S ++ G EAL L +RN+ +P+ + +L+AC
Sbjct: 486 KQVYNIS--PGLDHYSCMVDLLGRKGKLEEALEL---IRNMSAKPDAGIWGALLNACKIH 540
Query: 476 -HIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAG 514
++ + E+ +E ++ P + M ++ A AG
Sbjct: 541 RNVKIAEQAAESLFNLEPQMAAP-----YVEMANIYAAAG 575
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 368 bits (945), Expect = e-102, Method: Compositional matrix adjust.
Identities = 200/601 (33%), Positives = 338/601 (56%), Gaps = 11/601 (1%)
Query: 2 YGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRS----GFFPD 57
YG G + DA Q+FD M RN+VSW SMI +S NG E+ ++ +M+ F PD
Sbjct: 232 YGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPD 291
Query: 58 QLTFGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFT 117
T +++ C +I LG+ +H +K LV N L+ MY+ G + +A +F
Sbjct: 292 VATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFK 351
Query: 118 MISIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGV-YQPNEFVLGSVFSAC--SSLL 174
M + K+++SW++M+ GF+ G + R ML G + +E + + C S L
Sbjct: 352 MNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFL 411
Query: 175 EPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIA 234
P +++H K V N + YAKCG L A+ F+ I S + SWNA+I
Sbjct: 412 -PSL-KELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIG 469
Query: 235 AFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNK 294
A S D ++ QM GL+PDS T SLL AC+ +L G ++H +I++ +
Sbjct: 470 GHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLER 529
Query: 295 EVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQM 354
++ +Y S+L++Y C L ++F+A+ ++ +LVSWN +++ LQ+ +F+QM
Sbjct: 530 DLFVYLSVLSLYIHCGELCTVQALFDAM-EDKSLVSWNTVITGYLQNGFPDRALGVFRQM 588
Query: 355 LFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSV 414
+ + I++ + G C+ L SL +G + H +++K L D ++ LIDMYAK GS+
Sbjct: 589 VLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSI 648
Query: 415 IHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSAC 474
+ +VF+ + + SW+++I+GY + GL EA+ LF +M+ G P+++T++GVL+AC
Sbjct: 649 TQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTAC 708
Query: 475 SHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFI-RKTGFDPDIT 533
+H GL+ EG + M+ G+ P +H++C++D+L RAG L +A + + + D+
Sbjct: 709 NHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVG 768
Query: 534 TWKTLLSSCKTHGNVDIAERAAENILKLDPSNSAALVLLSSIHASAGNWEDVAKLRKVLD 593
WK+LLSSC+ H N+++ E+ A + +L+P VLLS+++A G WEDV K+R+ ++
Sbjct: 769 IWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMN 828
Query: 594 D 594
+
Sbjct: 829 E 829
Score = 270 bits (691), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 162/558 (29%), Positives = 283/558 (50%), Gaps = 21/558 (3%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRS-GFFPDQL 59
MY CGS D+R VFDA+ +N+ W ++IS YS+N +E + +I+M+ + PD
Sbjct: 129 MYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHF 188
Query: 60 TFGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMI 119
T+ +IKAC D+ +G +H V+K+G + N L+S Y G V A +F ++
Sbjct: 189 TYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIM 248
Query: 120 SIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQ---GVYQPNEFVLGSVFSACSSLLEP 176
++L+SW+SMIR F+ G+ E+ L +M+ + G + P+ L +V C+ E
Sbjct: 249 PERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREI 308
Query: 177 EYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAF 236
G+ +HG K L + + +L DMY+KCG + +A+ F + ++VSWN ++ F
Sbjct: 309 GLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGF 368
Query: 237 ADSGDANEAISIFRQMMHIG--LIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNK 294
+ GD + + RQM+ G + D +T L+ + C L ++H Y +K F
Sbjct: 369 SAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVY 428
Query: 295 EVALYNSLLTMYTKCSNLHDALSVFEAI-SKNANLVSWNAILSACLQHKQAGETFRLFKQ 353
+ N+ + Y KC +L A VF I SK N SWNA++ Q + Q
Sbjct: 429 NELVANAFVASYAKCGSLSYAQRVFHGIRSKTVN--SWNALIGGHAQSNDPRLSLDAHLQ 486
Query: 354 MLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGS 413
M S P+ T+ +LL C++L SL +G +VH F +++ L D+ V ++ +Y CG
Sbjct: 487 MKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGE 546
Query: 414 VIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSA 473
+ Q +FD+ E+ +++SW+++I GY +G AL +FR+M G++ ++ + V A
Sbjct: 547 LCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGA 606
Query: 474 CS-----HIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGF 528
CS +G + L + +E++ I + ++D+ A+ G + ++
Sbjct: 607 CSLLPSLRLGREAHAYALKHLLEDDAFIACS------LIDMYAKNGSITQSSKVFNGLK- 659
Query: 529 DPDITTWKTLLSSCKTHG 546
+ +W ++ HG
Sbjct: 660 EKSTASWNAMIMGYGIHG 677
Score = 212 bits (539), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 144/503 (28%), Positives = 247/503 (49%), Gaps = 20/503 (3%)
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSG-FGGHLVAQNGLISMYTNFGQVAHASDVFTMI 119
G +++A DI +GR++H V S V +I+MY G + VF +
Sbjct: 87 LGLLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDAL 146
Query: 120 SIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYG 179
K+L W+++I +++ E L F +M+ P+ F V AC+ + + G
Sbjct: 147 RSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIG 206
Query: 180 RQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADS 239
+HG+ K GLV +VF G +L Y GF+ A F + +LVSWN++I F+D+
Sbjct: 207 LAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDN 266
Query: 240 GDANEAISIFRQMMHI----GLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKE 295
G + E+ + +MM +PD T +++L C + G +H + VK+ +KE
Sbjct: 267 GFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKE 326
Query: 296 VALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQML 355
+ L N+L+ MY+KC + +A +F+ ++ N N+VSWN ++ TF + +QML
Sbjct: 327 LVLNNALMDMYSKCGCITNAQMIFK-MNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQML 385
Query: 356 F--SENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGS 413
+ K + +TI N + C + L ++HC+S+K V + V+N + YAKCGS
Sbjct: 386 AGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGS 445
Query: 414 VIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSA 473
+ +AQRVF + V SW++LI G+A S +L+ +M+ G+ P+ T +LSA
Sbjct: 446 LSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSA 505
Query: 474 CS-----HIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGF 528
CS +G G+ + N +E +L + + ++ L G L +
Sbjct: 506 CSKLKSLRLGKEVHGFIIRNWLERDLFV------YLSVLSLYIHCGELCTVQALFDAME- 558
Query: 529 DPDITTWKTLLSSCKTHGNVDIA 551
D + +W T+++ +G D A
Sbjct: 559 DKSLVSWNTVITGYLQNGFPDRA 581
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 71/135 (52%), Gaps = 5/135 (3%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
MY K GS+ + +VF+ + ++ SW +MI GY +G EA+ ++ +M R+G PD LT
Sbjct: 641 MYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLT 700
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSGFG--GHLVAQNGLISMYTNFGQVAHASDVFT- 117
F ++ AC +G I+ G + + +KS FG +L +I M GQ+ A V
Sbjct: 701 FLGVLTACNHSGLIHEGLR-YLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAE 759
Query: 118 -MISIKDLISWSSMI 131
M D+ W S++
Sbjct: 760 EMSEEADVGIWKSLL 774
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 368 bits (944), Expect = e-102, Method: Compositional matrix adjust.
Identities = 207/595 (34%), Positives = 323/595 (54%), Gaps = 8/595 (1%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
+YG G KDAR VFD + + W M+ Y N + E V +Y +++ GF D +
Sbjct: 85 LYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIV 144
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMIS 120
F +KAC D+ G+++H ++K ++V GL+ MY G++ A VF I+
Sbjct: 145 FSKALKACTELQDLDNGKKIHCQLVKVPSFDNVVL-TGLLDMYAKCGEIKSAHKVFNDIT 203
Query: 121 IKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGR 180
+++++ W+SMI G+ + E L LF M R+ NE+ G++ AC+ L G+
Sbjct: 204 LRNVVCWTSMIAGYVKNDLCEEGLVLFNRM-RENNVLGNEYTYGTLIMACTKLSALHQGK 262
Query: 181 QIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSG 240
HG K G+ + SL DMY KCG + +A+ F + DLV W A+I + +G
Sbjct: 263 WFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNG 322
Query: 241 DANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVG-FNKEVALY 299
NEA+S+F++M + + P+ +T S+L C L G +H +KVG ++ VA
Sbjct: 323 SVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWDTNVA-- 380
Query: 300 NSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSEN 359
N+L+ MY KC DA VFE S+ ++V+WN+I+S Q+ E LF +M
Sbjct: 381 NALVHMYAKCYQNRDAKYVFEMESEK-DIVAWNSIISGFSQNGSIHEALFLFHRMNSESV 439
Query: 360 KPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNG--LIDMYAKCGSVIHA 417
PN +T+ +L CA L SL VG+ +H +SVK G + SV G L+D YAKCG A
Sbjct: 440 TPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSA 499
Query: 418 QRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHI 477
+ +FD+ E N I+WS++I GY G +L LF +M +PNE T+ +LSAC H
Sbjct: 500 RLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHT 559
Query: 478 GLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKT 537
G+V EG +++M ++ P+ +H++CMVD+LARAG L +A I K PD+ +
Sbjct: 560 GMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGA 619
Query: 538 LLSSCKTHGNVDIAERAAENILKLDPSNSAALVLLSSIHASAGNWEDVAKLRKVL 592
L C H D+ E + +L L P +++ VL+S+++AS G W ++R ++
Sbjct: 620 FLHGCGMHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLYASDGRWNQAKEVRNLM 674
Score = 228 bits (580), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 152/501 (30%), Positives = 250/501 (49%), Gaps = 10/501 (1%)
Query: 78 RQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIKDLISWSSMIRGFTQL 137
RQ H + +G G + L+S+Y FG A VF I D W M+R +
Sbjct: 61 RQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLN 120
Query: 138 GYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRN-VF 196
+E + L+ +++ G ++ ++ V AC+ L + + G++IH K N V
Sbjct: 121 KESVEVVKLYDLLMKHG-FRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVPSFDNVVL 179
Query: 197 SGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIG 256
+G L DMYAKCG + SA F I ++V W ++IA + + E + +F +M
Sbjct: 180 TG--LLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENN 237
Query: 257 LIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDAL 316
++ + T+ +L+ ACT AL+QG H +VK G L SLL MY KC ++ +A
Sbjct: 238 VLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNAR 297
Query: 317 SVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAEL 376
VF S + +LV W A++ + E LF++M E KPN +TI ++L C +
Sbjct: 298 RVFNEHS-HVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLI 356
Query: 377 ASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLI 436
+LE+G VH S+K G + D +V+N L+ MYAKC A+ VF+ ++++W+S+I
Sbjct: 357 ENLELGRSVHGLSIKVG-IWDTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSII 415
Query: 437 VGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGI 496
G++ +G HEAL LF +M + V PN VT + SAC+ +G + G +L+ + +
Sbjct: 416 SGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFL 475
Query: 497 PPAREHF-SCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTLLSSCKTHGNVDIAERAA 555
+ H + ++D A+ G A I T + + TW ++ G+ +
Sbjct: 476 ASSSVHVGTALLDFYAKCGDPQSAR-LIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELF 534
Query: 556 ENILKLD--PSNSAALVLLSS 574
E +LK P+ S +LS+
Sbjct: 535 EEMLKKQQKPNESTFTSILSA 555
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 368 bits (944), Expect = e-102, Method: Compositional matrix adjust.
Identities = 204/602 (33%), Positives = 332/602 (55%), Gaps = 10/602 (1%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
MY KC + ARQ+FD M RN++S+ S+ISGY+Q G +A+ ++++ + D+ T
Sbjct: 91 MYCKCRELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFT 150
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMIS 120
+ + C D+ LG LH V+ +G + N LI MY+ G++ A +F
Sbjct: 151 YAGALGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCD 210
Query: 121 IKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEP---E 177
+D +SW+S+I G+ ++G E L L M R G+ + LGSV AC L E
Sbjct: 211 ERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGL-NLTTYALGSVLKACCINLNEGFIE 269
Query: 178 YGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFA 237
G IH AK G+ ++ +L DMYAK G L A F + S ++V++NA+I+ F
Sbjct: 270 KGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFL 329
Query: 238 DSGD-----ANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGF 292
+ ++EA +F M GL P TF +L AC++ L G QIH+ I K F
Sbjct: 330 QMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNF 389
Query: 293 NKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFK 352
+ + ++L+ +Y + D + F + SK ++ SW +++ +Q++Q F LF+
Sbjct: 390 QSDEFIGSALIELYALMGSTEDGMQCFASTSKQ-DIASWTSMIDCHVQNEQLESAFDLFR 448
Query: 353 QMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCG 412
Q+ S +P T++ ++ CA+ A+L G Q+ +++KSG+ SV I MYAK G
Sbjct: 449 QLFSSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSG 508
Query: 413 SVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLS 472
++ A +VF +NP+V ++S++I A G +EALN+F M+ G++PN+ ++GVL
Sbjct: 509 NMPLANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLI 568
Query: 473 ACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDI 532
AC H GLV +G + M+ + I P +HF+C+VDLL R G L +AE I +GF
Sbjct: 569 ACCHGGLVTQGLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDHP 628
Query: 533 TTWKTLLSSCKTHGNVDIAERAAENILKLDPSNSAALVLLSSIHASAGNWEDVAKLRKVL 592
TW+ LLSSC+ + + I +R AE +++L+P S + VLL +I+ +G ++R+++
Sbjct: 629 VTWRALLSSCRVYKDSVIGKRVAERLMELEPEASGSYVLLHNIYNDSGVNSSAEEVRELM 688
Query: 593 DD 594
D
Sbjct: 689 RD 690
Score = 211 bits (538), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 147/518 (28%), Positives = 265/518 (51%), Gaps = 17/518 (3%)
Query: 71 AGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIKDLISWSSM 130
+G + LG+ H H+IKS L N L++MY ++ A +F + +++IS++S+
Sbjct: 60 SGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERNIISFNSL 119
Query: 131 IRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFG 190
I G+TQ+G+ +A+ LF + R+ + ++F C + + G +HG+ G
Sbjct: 120 ISGYTQMGFYEQAMELFLEA-REANLKLDKFTYAGALGFCGERCDLDLGELLHGLVVVNG 178
Query: 191 LVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFR 250
L + VF L DMY+KCG L A + F + + D VSWN++I+ + G A E +++
Sbjct: 179 LSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNLLA 238
Query: 251 QMMHIGLIPDSITFLSLLCACTSPMA---LNQGMQIHSYIVKVGFNKEVALYNSLLTMYT 307
+M GL + S+L AC + + +GM IH Y K+G ++ + +LL MY
Sbjct: 239 KMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYA 298
Query: 308 KCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQ-----AGETFRLFKQMLFSENKPN 362
K +L +A+ +F ++ + N+V++NA++S LQ + + E F+LF M +P+
Sbjct: 299 KNGSLKEAIKLF-SLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPS 357
Query: 363 MITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFD 422
T + +L C+ +LE G Q+H K+ D + + LI++YA GS + F
Sbjct: 358 PSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFA 417
Query: 423 STENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEE 482
ST ++ SW+S+I + + A +LFR++ + +RP E T ++SAC+ +
Sbjct: 418 STSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALSS 477
Query: 483 GWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEA-ETFIRKTGFDPDITTWKTLLSS 541
G + + GI + + + A++G + A + FI +PD+ T+ ++SS
Sbjct: 478 GEQIQGYAIKS-GIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQ--NPDVATYSAMISS 534
Query: 542 CKTHGNVDIAERAAENILK--LDPSNSAAL-VLLSSIH 576
HG+ + A E++ + P+ A L VL++ H
Sbjct: 535 LAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACCH 572
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 90/177 (50%), Gaps = 12/177 (6%)
Query: 369 LLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPN 428
L T A+ S+ +G H +KS L + + N L++MY KC + A+++FD N
Sbjct: 53 LFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERN 112
Query: 429 VISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSH-----IGLVEEG 483
+IS++SLI GY G +A+ LF + R ++ ++ TY G L C +G + G
Sbjct: 113 IISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGELLHG 172
Query: 484 WNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTLLS 540
+ N + +++ + + ++D+ ++ G L +A + + + D +W +L+S
Sbjct: 173 LVVVNGLSQQVFL------INVLIDMYSKCGKLDQAMSLFDRCD-ERDQVSWNSLIS 222
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 367 bits (941), Expect = e-101, Method: Compositional matrix adjust.
Identities = 203/588 (34%), Positives = 336/588 (57%), Gaps = 8/588 (1%)
Query: 8 MKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTFGSIIKA 67
M+DA Q+FD M+ + W MI G++ G EAV Y +M+ +G D T+ +IK+
Sbjct: 80 MEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKS 139
Query: 68 CCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIKDLISW 127
+ G+++HA VIK GF + N LIS+Y G A VF + +D++SW
Sbjct: 140 VAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSW 199
Query: 128 SSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICA 187
+SMI G+ LG +L LF++ML+ G ++P+ F S ACS + P+ G++IH
Sbjct: 200 NSMISGYLALGDGFSSLMLFKEMLKCG-FKPDRFSTMSALGACSHVYSPKMGKEIHCHAV 258
Query: 188 KFGL-VRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAI 246
+ + +V S+ DMY+K G + A+ F + ++V+WN +I +A +G +A
Sbjct: 259 RSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAF 318
Query: 247 SIFRQMMHI-GLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTM 305
F++M GL PD IT ++LL A A+ +G IH Y ++ GF + L +L+ M
Sbjct: 319 LCFQKMSEQNGLQPDVITSINLLPAS----AILEGRTIHGYAMRRGFLPHMVLETALIDM 374
Query: 306 YTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMIT 365
Y +C L A +F+ +++ N++SWN+I++A +Q+ + LF+++ S P+ T
Sbjct: 375 YGECGQLKSAEVIFDRMAEK-NVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTT 433
Query: 366 ITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTE 425
I ++L AE SL G ++H + VKS + + N L+ MYA CG + A++ F+
Sbjct: 434 IASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHIL 493
Query: 426 NPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWN 485
+V+SW+S+I+ YA+ G G ++ LF +M V PN+ T+ +L+ACS G+V+EGW
Sbjct: 494 LKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWE 553
Query: 486 LYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTLLSSCKTH 545
+ +M+ E GI P EH+ CM+DL+ R G A+ F+ + F P W +LL++ + H
Sbjct: 554 YFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLLNASRNH 613
Query: 546 GNVDIAERAAENILKLDPSNSAALVLLSSIHASAGNWEDVAKLRKVLD 593
++ IAE AAE I K++ N+ VLL +++A AG WEDV +++ +++
Sbjct: 614 KDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIKLLME 661
Score = 229 bits (584), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 136/440 (30%), Positives = 240/440 (54%), Gaps = 10/440 (2%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
+Y K G DA +VF+ M R++VSW SMISGY G G +++++ +ML+ GF PD+ +
Sbjct: 174 LYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFS 233
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSGF-GGHLVAQNGLISMYTNFGQVAHASDVFTMI 119
S + AC +G+++H H ++S G ++ ++ MY+ +G+V++A +F +
Sbjct: 234 TMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGM 293
Query: 120 SIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYG 179
+++++W+ MI + + G +A F+ M Q QP+ ++ A S++LE G
Sbjct: 294 IQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPA-SAILE---G 349
Query: 180 RQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADS 239
R IHG + G + ++ +L DMY +CG L SA+ F ++ +++SWN+IIAA+ +
Sbjct: 350 RTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQN 409
Query: 240 GDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALY 299
G A+ +F+++ L+PDS T S+L A ++L++G +IH+YIVK + +
Sbjct: 410 GKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIIL 469
Query: 300 NSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSEN 359
NSL+ MY C +L DA F I ++VSWN+I+ A H + LF +M+ S
Sbjct: 470 NSLVHMYAMCGDLEDARKCFNHILLK-DVVSWNSIIMAYAVHGFGRISVWLFSEMIASRV 528
Query: 360 KPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSN--GLIDMYAKCGSVIHA 417
PN T +LL C+ ++ G + + S+K +D + + ++D+ + G+ A
Sbjct: 529 NPNKSTFASLLAACSISGMVDEGWE-YFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAA 587
Query: 418 QRVFDSTE-NPNVISWSSLI 436
+R + P W SL+
Sbjct: 588 KRFLEEMPFVPTARIWGSLL 607
Score = 157 bits (396), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 100/396 (25%), Positives = 194/396 (48%), Gaps = 29/396 (7%)
Query: 154 GVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPS 213
G+ +P VL + + +P R + G +A +
Sbjct: 43 GISKPARLVLRDRYKVTKQVNDPALTRALRG--------------------FADSRLMED 82
Query: 214 AKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTS 273
A F ++ D WN +I F G EA+ + +M+ G+ D+ T+ ++ +
Sbjct: 83 ALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAG 142
Query: 274 PMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNA 333
+L +G +IH+ ++K+GF +V + NSL+++Y K DA VFE + + ++VSWN+
Sbjct: 143 ISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPER-DIVSWNS 201
Query: 334 ILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSG 393
++S L + LFK+ML KP+ + + LG C+ + S ++G ++HC +V+S
Sbjct: 202 MISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSR 261
Query: 394 LVL-DVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLF 452
+ DV V ++DMY+K G V +A+R+F+ N+++W+ +I YA +G +A F
Sbjct: 262 IETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCF 321
Query: 453 RKMRNL-GVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLA 511
+KM G++P+ +T + +L A + + EG ++ G P + ++D+
Sbjct: 322 QKMSEQNGLQPDVITSINLLPASA----ILEGRTIHGYAMRR-GFLPHMVLETALIDMYG 376
Query: 512 RAGCLYEAETFIRKTGFDPDITTWKTLLSSCKTHGN 547
G L AE + + ++ +W +++++ +G
Sbjct: 377 ECGQLKSAEVIFDRMA-EKNVISWNSIIAAYVQNGK 411
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 129/244 (52%), Gaps = 5/244 (2%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
MYG+CG +K A +FD M +NV+SW S+I+ Y QNG+ A+ ++ ++ S PD T
Sbjct: 374 MYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTT 433
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMIS 120
SI+ A + + GR++HA+++KS + + + N L+ MY G + A F I
Sbjct: 434 IASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHIL 493
Query: 121 IKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACS-SLLEPEYG 179
+KD++SW+S+I + G+ +++LF +M+ V PN+ S+ +ACS S + E
Sbjct: 494 LKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRV-NPNKSTFASLLAACSISGMVDEGW 552
Query: 180 RQIHGICAKFGLVRNV-FSGCSLCDMYAKCGFLPSAKTAFYQIE-SPDLVSWNAIIAAFA 237
+ ++G+ + GC L D+ + G +AK ++ P W +++ A
Sbjct: 553 EYFESMKREYGIDPGIEHYGCML-DLIGRTGNFSAAKRFLEEMPFVPTARIWGSLLNASR 611
Query: 238 DSGD 241
+ D
Sbjct: 612 NHKD 615
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 365 bits (937), Expect = e-101, Method: Compositional matrix adjust.
Identities = 205/610 (33%), Positives = 333/610 (54%), Gaps = 22/610 (3%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
MY K ++ +VF + +N VSW+++I+G QN + A+ + +M + Q
Sbjct: 224 MYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSI 283
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMIS 120
+ S++++C ++ LG QLHAH +KS F + + + MY + A +F
Sbjct: 284 YASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSE 343
Query: 121 IKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGR 180
+ S+++MI G++Q + +AL LF ++ G+ +E L VF AC+ + G
Sbjct: 344 NLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGL-GFDEISLSGVFRACALVKGLSEGL 402
Query: 181 QIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSG 240
QI+G+ K L +V + DMY KC L A F ++ D VSWNAIIAA +G
Sbjct: 403 QIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNG 462
Query: 241 DANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYN 300
E + +F M+ + PD TF S+L ACT +L GM+IHS IVK G ++
Sbjct: 463 KGYETLFLFVSMLRSRIEPDEFTFGSILKACTGG-SLGYGMEIHSSIVKSGMASNSSVGC 521
Query: 301 SLLTMYTKCSNLHDALSVFEAISKNANL-------------------VSWNAILSACLQH 341
SL+ MY+KC + +A + + AN+ VSWN+I+S +
Sbjct: 522 SLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMK 581
Query: 342 KQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVS 401
+Q+ + LF +M+ P+ T +L TCA LAS +G Q+H +K L DV +
Sbjct: 582 EQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYIC 641
Query: 402 NGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVR 461
+ L+DMY+KCG + ++ +F+ + + ++W+++I GYA G G EA+ LF +M ++
Sbjct: 642 STLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIK 701
Query: 462 PNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAET 521
PN VT++ +L AC+H+GL+++G + M+ + G+ P H+S MVD+L ++G + A
Sbjct: 702 PNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALE 761
Query: 522 FIRKTGFDPDITTWKTLLSSCKTH-GNVDIAERAAENILKLDPSNSAALVLLSSIHASAG 580
IR+ F+ D W+TLL C H NV++AE A +L+LDP +S+A LLS+++A AG
Sbjct: 762 LIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAG 821
Query: 581 NWEDVAKLRK 590
WE V+ LR+
Sbjct: 822 MWEKVSDLRR 831
Score = 266 bits (680), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 176/583 (30%), Positives = 292/583 (50%), Gaps = 35/583 (6%)
Query: 2 YGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTF 61
Y K M A F+ M +R+VVSW SM+SGY QNG+ +++ +++ M R G D TF
Sbjct: 124 YSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTF 183
Query: 62 GSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISI 121
I+K C D LG Q+H V++ G +VA + L+ MY + + VF I
Sbjct: 184 AIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPE 243
Query: 122 KDLISWSSMIRGFTQLGYEIEALYLFRDMLR--QGVYQPNEFVLGSVFSACSSLLEPEYG 179
K+ +SWS++I G Q AL F++M + GV Q + SV +C++L E G
Sbjct: 244 KNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQS---IYASVLRSCAALSELRLG 300
Query: 180 RQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADS 239
Q+H K + + DMYAKC + A+ F E+ + S+NA+I ++
Sbjct: 301 GQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQE 360
Query: 240 GDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALY 299
+A+ +F ++M GL D I+ + AC L++G+QI+ +K + +V +
Sbjct: 361 EHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVA 420
Query: 300 NSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSEN 359
N+ + MY KC L +A VF+ + + + VSWNAI++A Q+ + ET LF ML S
Sbjct: 421 NAAIDMYGKCQALAEAFRVFDEMRRR-DAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRI 479
Query: 360 KPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQR 419
+P+ T ++L C SL G ++H VKSG+ + SV LIDMY+KCG + A++
Sbjct: 480 EPDEFTFGSILKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEK 538
Query: 420 V----------------FDSTENPNV----ISWSSLIVGYAMSGLGHEALNLFRKMRNLG 459
+ + N + +SW+S+I GY M +A LF +M +G
Sbjct: 539 IHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMG 598
Query: 460 VRPNEVTYVGVLSACSHIGLVEEGWNLY-NTMEEELGIPPAREHFSC--MVDLLARAGCL 516
+ P++ TY VL C+++ G ++ +++EL + + C +VD+ ++ G L
Sbjct: 599 ITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKEL----QSDVYICSTLVDMYSKCGDL 654
Query: 517 YEAETFIRKTGFDPDITTWKTLLSSCKTHGNVDIAERAAENIL 559
+++ K+ D TW ++ HG + A + E ++
Sbjct: 655 HDSRLMFEKS-LRRDFVTWNAMICGYAHHGKGEEAIQLFERMI 696
Score = 226 bits (577), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 144/492 (29%), Positives = 246/492 (50%), Gaps = 37/492 (7%)
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDV----- 115
F + K C G + LG+Q HAH+I SGF N L+ +YTN AS V
Sbjct: 51 FSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMP 110
Query: 116 --------------------------FTMISIKDLISWSSMIRGFTQLGYEIEALYLFRD 149
F M+ ++D++SW+SM+ G+ Q G ++++ +F D
Sbjct: 111 LRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVD 170
Query: 150 MLRQGV-YQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKC 208
M R+G+ + F + + CS L + G QIHGI + G +V + +L DMYAK
Sbjct: 171 MGREGIEFDGRTFAI--ILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKG 228
Query: 209 GFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLL 268
+ F I + VSW+AIIA + + A+ F++M + + S+L
Sbjct: 229 KRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVL 288
Query: 269 CACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANL 328
+C + L G Q+H++ +K F + + + L MY KC N+ DA +F+ S+N N
Sbjct: 289 RSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDN-SENLNR 347
Query: 329 VSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCF 388
S+NA+++ Q + + LF +++ S + I+++ + CA + L G Q++
Sbjct: 348 QSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGL 407
Query: 389 SVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEA 448
++KS L LDV V+N IDMY KC ++ A RVFD + +SW+++I + +G G+E
Sbjct: 408 AIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYET 467
Query: 449 LNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVD 508
L LF M + P+E T+ +L AC+ G + G +++++ + G+ ++D
Sbjct: 468 LFLFVSMLRSRIEPDEFTFGSILKACTG-GSLGYGMEIHSSIVKS-GMASNSSVGCSLID 525
Query: 509 LLARAGCLYEAE 520
+ ++ G + EAE
Sbjct: 526 MYSKCGMIEEAE 537
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 104/360 (28%), Positives = 190/360 (52%), Gaps = 11/360 (3%)
Query: 192 VRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQ 251
+R+V S + + Y+K + A + F + D+VSWN++++ + +G++ ++I +F
Sbjct: 111 LRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVD 170
Query: 252 MMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSN 311
M G+ D TF +L C+ + GMQIH +V+VG + +V ++LL MY K
Sbjct: 171 MGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKR 230
Query: 312 LHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLG 371
++L VF+ I + N VSW+AI++ C+Q+ + FK+M + ++L
Sbjct: 231 FVESLRVFQGIPEK-NSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLR 289
Query: 372 TCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVIS 431
+CA L+ L +G Q+H ++KS D V +DMYAKC ++ AQ +FD++EN N S
Sbjct: 290 SCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQS 349
Query: 432 WSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTME 491
++++I GY+ G +AL LF ++ + G+ +E++ GV AC+ + + EG +Y
Sbjct: 350 YNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYG--- 406
Query: 492 EELGIPPAREHFSCM----VDLLARAGCLYEAETFIRKTGFDPDITTWKTLLSSCKTHGN 547
L I + C+ +D+ + L EA + D +W ++++ + +G
Sbjct: 407 --LAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMR-RRDAVSWNAIIAAHEQNGK 463
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 65/132 (49%), Gaps = 7/132 (5%)
Query: 327 NLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITN---LLGTCAELASLEVGN 383
++VS+N L+ + +++ +F F L N+ N ++ TN + CA+ +LE+G
Sbjct: 13 SVVSFNRCLTEKISYRRV-PSFSYFTDFL---NQVNSVSTTNFSFVFKECAKQGALELGK 68
Query: 384 QVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSG 443
Q H + SG V N L+ +Y + A VFD +V+SW+ +I GY+ S
Sbjct: 69 QAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSN 128
Query: 444 LGHEALNLFRKM 455
+A + F M
Sbjct: 129 DMFKANSFFNMM 140
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 364 bits (935), Expect = e-101, Method: Compositional matrix adjust.
Identities = 200/600 (33%), Positives = 337/600 (56%), Gaps = 15/600 (2%)
Query: 1 MYGKCGSMKDARQVFDAM-HLR-NVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQ 58
+Y C ++ AR VFD + H R N ++W MI Y+ N +A+ +Y +ML SG P +
Sbjct: 44 LYASCNEVELARHVFDEIPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTK 103
Query: 59 LTFGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTM 118
T+ ++KAC I G+ +H+HV S F + L+ Y G++ A VF
Sbjct: 104 YTYPFVLKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDE 163
Query: 119 ISIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEY 178
+ +D+++W++MI GF+ + + LF DM R PN + +F A
Sbjct: 164 MPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALRE 223
Query: 179 GRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFAD 238
G+ +HG C + G ++ + D+YAK + A+ F + V+W+A+I + +
Sbjct: 224 GKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVE 283
Query: 239 SGDANEAISIFRQMMHIGLIPDSITFLS------LLCACTSPMALNQGMQIHSYIVKVGF 292
+ EA +F QM L+ D++ ++ +L C L+ G +H Y VK GF
Sbjct: 284 NEMIKEAGEVFFQM----LVNDNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGF 339
Query: 293 NKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFK 352
++ + N++++ Y K +L DA F I +++S+N++++ C+ + + E+FRLF
Sbjct: 340 ILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLK-DVISYNSLITGCVVNCRPEESFRLFH 398
Query: 353 QMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCG 412
+M S +P++ T+ +L C+ LA+L G+ H + V G ++ S+ N L+DMY KCG
Sbjct: 399 EMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCG 458
Query: 413 SVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLS 472
+ A+RVFD+ +++SW++++ G+ + GLG EAL+LF M+ GV P+EVT + +LS
Sbjct: 459 KLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILS 518
Query: 473 ACSHIGLVEEGWNLYNTMEE-ELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPD 531
ACSH GLV+EG L+N+M + + P +H++CM DLLARAG L EA F+ K F+PD
Sbjct: 519 ACSHSGLVDEGKQLFNSMSRGDFNVIPRIDHYNCMTDLLARAGYLDEAYDFVNKMPFEPD 578
Query: 532 ITTWKTLLSSCKTHGNVDIAERAAENILKLDPSNSAALVLLSSIHASAGNWEDVAKLRKV 591
I TLLS+C T+ N ++ ++ + L + + +LVLLS+ +++A WED A++R +
Sbjct: 579 IRVLGTLLSACWTYKNAELGNEVSKKMQSLGET-TESLVLLSNTYSAAERWEDAARIRMI 637
Score = 214 bits (546), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 149/493 (30%), Positives = 248/493 (50%), Gaps = 12/493 (2%)
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSG--FGGHLVAQNGLISMYTNFGQVAHASDVFTM 118
F S+++ C + ++ LG+ +H H++K V N L +Y + +V A VF
Sbjct: 2 FLSLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVN-LTRLYASCNEVELARHVFDE 60
Query: 119 ISIKDL--ISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEP 176
I + I+W MIR + + +AL L+ ML GV +P ++ V AC+ L
Sbjct: 61 IPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGV-RPTKYTYPFVLKACAGLRAI 119
Query: 177 EYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAF 236
+ G+ IH +++ +L D YAKCG L A F ++ D+V+WNA+I+ F
Sbjct: 120 DDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGF 179
Query: 237 ADSGDANEAISIFRQMMHI-GLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKE 295
+ + I +F M I GL P+ T + + A AL +G +H Y ++GF+ +
Sbjct: 180 SLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSND 239
Query: 296 VALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQML 355
+ + +L +Y K + A VF+ K N V+W+A++ ++++ E +F QML
Sbjct: 240 LVVKTGILDVYAKSKCIIYARRVFDLDFKK-NEVTWSAMIGGYVENEMIKEAGEVFFQML 298
Query: 356 FSENKPNM--ITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGS 413
++N + + I +L CA L G VHC++VK+G +LD++V N +I YAK GS
Sbjct: 299 VNDNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGS 358
Query: 414 VIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSA 473
+ A R F +VIS++SLI G ++ E+ LF +MR G+RP+ T +GVL+A
Sbjct: 359 LCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTA 418
Query: 474 CSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDIT 533
CSH+ + G + + G + ++D+ + G L A+ + T DI
Sbjct: 419 CSHLAALGHGSSCHGYCVVH-GYAVNTSICNALMDMYTKCGKLDVAKR-VFDTMHKRDIV 476
Query: 534 TWKTLLSSCKTHG 546
+W T+L HG
Sbjct: 477 SWNTMLFGFGIHG 489
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 363 bits (933), Expect = e-100, Method: Compositional matrix adjust.
Identities = 195/589 (33%), Positives = 336/589 (57%), Gaps = 2/589 (0%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
++ + GS+ +A +VF+ + + V + +M+ G+++ ++A+ +++M P
Sbjct: 78 LFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYN 137
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMIS 120
F ++K C ++ +G+++H ++KSGF L A GL +MY QV A VF +
Sbjct: 138 FTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMP 197
Query: 121 IKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGR 180
+DL+SW++++ G++Q G AL + + M + + +P+ + SV A S+L G+
Sbjct: 198 ERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENL-KPSFITIVSVLPAVSALRLISVGK 256
Query: 181 QIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSG 240
+IHG + G V +L DMYAKCG L +A+ F + ++VSWN++I A+ +
Sbjct: 257 EIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNE 316
Query: 241 DANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYN 300
+ EA+ IF++M+ G+ P ++ + L AC L +G IH V++G ++ V++ N
Sbjct: 317 NPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVN 376
Query: 301 SLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENK 360
SL++MY KC + A S+F + ++ LVSWNA++ Q+ + + F QM K
Sbjct: 377 SLISMYCKCKEVDTAASMFGKL-QSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVK 435
Query: 361 PNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRV 420
P+ T +++ AEL+ +H ++S L +V V+ L+DMYAKCG+++ A+ +
Sbjct: 436 PDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLI 495
Query: 421 FDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLV 480
FD +V +W+++I GY G G AL LF +M+ ++PN VT++ V+SACSH GLV
Sbjct: 496 FDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLV 555
Query: 481 EEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTLLS 540
E G + M+E I + +H+ MVDLL RAG L EA FI + P + + +L
Sbjct: 556 EAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLG 615
Query: 541 SCKTHGNVDIAERAAENILKLDPSNSAALVLLSSIHASAGNWEDVAKLR 589
+C+ H NV+ AE+AAE + +L+P + VLL++I+ +A WE V ++R
Sbjct: 616 ACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVR 664
Score = 245 bits (625), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 146/474 (30%), Positives = 253/474 (53%), Gaps = 14/474 (2%)
Query: 78 RQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIKDLISWSSMIRGFTQL 137
RQ+ V K+G Q L+S++ +G V A+ VF I K + + +M++GF ++
Sbjct: 54 RQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKV 113
Query: 138 GYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFS 197
+AL F M R +P + + C E G++IHG+ K G ++F+
Sbjct: 114 SDLDKALQFFVRM-RYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFA 172
Query: 198 GCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGL 257
L +MYAKC + A+ F ++ DLVSWN I+A ++ +G A A+ + + M L
Sbjct: 173 MTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENL 232
Query: 258 IPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALS 317
P IT +S+L A ++ ++ G +IH Y ++ GF+ V + +L+ MY KC +L A
Sbjct: 233 KPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQ 292
Query: 318 VFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELA 377
+F+ + + N+VSWN+++ A +Q++ E +F++ML KP +++ L CA+L
Sbjct: 293 LFDGMLER-NVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLG 351
Query: 378 SLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIV 437
LE G +H SV+ GL +VSV N LI MY KC V A +F ++ ++SW+++I+
Sbjct: 352 DLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMIL 411
Query: 438 GYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVE-----EGWNLYNTMEE 492
G+A +G +ALN F +MR+ V+P+ TYV V++A + + + G + + +++
Sbjct: 412 GFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDK 471
Query: 493 ELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTLLSSCKTHG 546
+ + A +VD+ A+ G + A I + +TTW ++ THG
Sbjct: 472 NVFVTTA------LVDMYAKCGAIMIAR-LIFDMMSERHVTTWNAMIDGYGTHG 518
Score = 181 bits (458), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 112/349 (32%), Positives = 185/349 (53%), Gaps = 8/349 (2%)
Query: 148 RDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAK 207
R+ + VY+ +L CSSL E RQI + K GL + F L ++ +
Sbjct: 28 RNYIPANVYEHPAALL---LERCSSLKEL---RQILPLVFKNGLYQEHFFQTKLVSLFCR 81
Query: 208 CGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSL 267
G + A F I+S V ++ ++ FA D ++A+ F +M + + P F L
Sbjct: 82 YGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYL 141
Query: 268 LCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNAN 327
L C L G +IH +VK GF+ ++ L MY KC +++A VF+ + + +
Sbjct: 142 LKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPER-D 200
Query: 328 LVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHC 387
LVSWN I++ Q+ A + K M KP+ ITI ++L + L + VG ++H
Sbjct: 201 LVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHG 260
Query: 388 FSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHE 447
++++SG V++S L+DMYAKCGS+ A+++FD NV+SW+S+I Y + E
Sbjct: 261 YAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKE 320
Query: 448 ALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGI 496
A+ +F+KM + GV+P +V+ +G L AC+ +G +E G + + ELG+
Sbjct: 321 AMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERG-RFIHKLSVELGL 368
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 363 bits (931), Expect = e-100, Method: Compositional matrix adjust.
Identities = 197/611 (32%), Positives = 346/611 (56%), Gaps = 20/611 (3%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
+Y KCG +VFD + RN VSW S+IS + A+ + ML P T
Sbjct: 142 LYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFT 201
Query: 61 FGSIIKACC---IAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFT 117
S++ AC + + +G+Q+HA+ ++ G + N L++MY G++A + +
Sbjct: 202 LVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFII-NTLVAMYGKLGKLASSKVLLG 260
Query: 118 MISIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPE 177
+DL++W++++ Q +EAL R+M+ +GV +P+EF + SV ACS L
Sbjct: 261 SFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGV-EPDEFTISSVLPACSHLEMLR 319
Query: 178 YGRQIHGICAKFG-LVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAF 236
G+++H K G L N F G +L DMY C + S + F + + WNA+IA +
Sbjct: 320 TGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGY 379
Query: 237 ADSGDANEAISIFRQMMH-IGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKE 295
+ + EA+ +F M GL+ +S T ++ AC A ++ IH ++VK G +++
Sbjct: 380 SQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRD 439
Query: 296 VALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQML 355
+ N+L+ MY++ + A+ +F + ++ +LV+WN +++ + + + L +M
Sbjct: 440 RFVQNTLMDMYSRLGKIDIAMRIFGKM-EDRDLVTWNTMITGYVFSEHHEDALLLLHKMQ 498
Query: 356 FSENK-----------PNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGL 404
E K PN IT+ +L +CA L++L G ++H +++K+ L DV+V + L
Sbjct: 499 NLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSAL 558
Query: 405 IDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNE 464
+DMYAKCG + +++VFD NVI+W+ +I+ Y M G G EA++L R M GV+PNE
Sbjct: 559 VDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNE 618
Query: 465 VTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIR 524
VT++ V +ACSH G+V+EG ++ M+ + G+ P+ +H++C+VDLL RAG + EA +
Sbjct: 619 VTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMN 678
Query: 525 KTGFDPDIT-TWKTLLSSCKTHGNVDIAERAAENILKLDPSNSAALVLLSSIHASAGNWE 583
D + W +LL + + H N++I E AA+N+++L+P+ ++ VLL++I++SAG W+
Sbjct: 679 MMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWD 738
Query: 584 DVAKLRKVLDD 594
++R+ + +
Sbjct: 739 KATEVRRNMKE 749
Score = 239 bits (611), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 159/544 (29%), Positives = 267/544 (49%), Gaps = 32/544 (5%)
Query: 26 WTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTFGSIIKACCIAGDIYLGRQLHAHVI 85
W ++ ++ EAV+ Y+ M+ G PD F +++KA D+ LG+Q+HAHV
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 86 KSGFG-GHLVAQNGLISMYTNFGQVAHASDVFTMISIKDLISWSSMIRGFTQLGYEIEAL 144
K G+G + N L+++Y G VF IS ++ +SW+S+I AL
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 145 YLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPE---YGRQIHGICAKFGLVRNVFSGCSL 201
FR ML + V +P+ F L SV +ACS+L PE G+Q+H + G + N F +L
Sbjct: 185 EAFRCMLDENV-EPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGEL-NSFIINTL 242
Query: 202 CDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDS 261
MY K G L S+K DLV+WN ++++ + EA+ R+M+ G+ PD
Sbjct: 243 VAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDE 302
Query: 262 ITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNS-LLTMYTKCSNLHDALSVFE 320
T S+L AC+ L G ++H+Y +K G E + S L+ MY C + VF+
Sbjct: 303 FTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFD 362
Query: 321 AISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSEN-KPNMITITNLLGTCAELASL 379
+ + + WNA+++ Q++ E LF M S N T+ ++ C +
Sbjct: 363 GMF-DRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAF 421
Query: 380 EVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGY 439
+H F VK GL D V N L+DMY++ G + A R+F E+ ++++W+++I GY
Sbjct: 422 SRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGY 481
Query: 440 AMSGLGHEALNLFRKMRNL-----------GVRPNEVTYVGVLSACSHIGLVEEGWNLY- 487
S +AL L KM+NL ++PN +T + +L +C+ + + +G ++
Sbjct: 482 VFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHA 541
Query: 488 ----NTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTLLSSCK 543
N + ++ + S +VD+ A+ GCL + + ++ TW ++ +
Sbjct: 542 YAIKNNLATDVAVG------SALVDMYAKCGCLQMSRKVFDQIP-QKNVITWNVIIMAYG 594
Query: 544 THGN 547
HGN
Sbjct: 595 MHGN 598
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 119/253 (47%), Gaps = 14/253 (5%)
Query: 315 ALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCA 374
A S+F IS++ + W +L + ++ E + M+ KP+ LL A
Sbjct: 51 APSIF--ISQSRSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVA 108
Query: 375 ELASLEVGNQVHCFSVKSGLVLD-VSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWS 433
+L +E+G Q+H K G +D V+V+N L+++Y KCG +VFD N +SW+
Sbjct: 109 DLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWN 168
Query: 434 SLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVE-----EGWNLYN 488
SLI AL FR M + V P+ T V V++ACS++ + E + + Y
Sbjct: 169 SLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYG 228
Query: 489 TMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTLLSS-CKTHGN 547
+ EL + +V + + G L ++ + G D+ TW T+LSS C+
Sbjct: 229 LRKGELN----SFIINTLVAMYGKLGKLASSKVLLGSFG-GRDLVTWNTVLSSLCQNEQL 283
Query: 548 VDIAERAAENILK 560
++ E E +L+
Sbjct: 284 LEALEYLREMVLE 296
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 362 bits (929), Expect = e-100, Method: Compositional matrix adjust.
Identities = 197/589 (33%), Positives = 330/589 (56%), Gaps = 5/589 (0%)
Query: 16 DAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTFGSIIKACCIAGDIY 75
DA + ++ +S Y +GQ + + + M+ S DQ+TF ++ +
Sbjct: 273 DASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLA 332
Query: 76 LGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIKDLISWSSMIRGFT 135
LG+Q+H +K G L N LI+MY + A VF +S +DLISW+S+I G
Sbjct: 333 LGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIA 392
Query: 136 QLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEP-EYGRQIHGICAKFGLVRN 194
Q G E+EA+ LF +LR G+ +P+++ + SV A SSL E +Q+H K V +
Sbjct: 393 QNGLEVEAVCLFMQLLRCGL-KPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSD 451
Query: 195 VFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMH 254
F +L D Y++ + A+ F + + DLV+WNA++A + S D ++ + +F M
Sbjct: 452 SFVSTALIDAYSRNRCMKEAEILF-ERHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHK 510
Query: 255 IGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHD 314
G D T ++ C A+NQG Q+H+Y +K G++ ++ + + +L MY KC ++
Sbjct: 511 QGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSA 570
Query: 315 ALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCA 374
A F++I + V+W ++S C+++ + F +F QM P+ TI L +
Sbjct: 571 AQFAFDSIPVPDD-VAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASS 629
Query: 375 ELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSS 434
L +LE G Q+H ++K D V L+DMYAKCGS+ A +F E N+ +W++
Sbjct: 630 CLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNA 689
Query: 435 LIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEEL 494
++VG A G G E L LF++M++LG++P++VT++GVLSACSH GLV E + +M +
Sbjct: 690 MLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDY 749
Query: 495 GIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTLLSSCKTHGNVDIAERA 554
GI P EH+SC+ D L RAG + +AE I + + ++TLL++C+ G+ + +R
Sbjct: 750 GIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRV 809
Query: 555 AENILKLDPSNSAALVLLSSIHASAGNWEDVAKLRKVLDDGYDPAQRLG 603
A +L+L+P +S+A VLLS+++A+A W+++ KL + + G+ + G
Sbjct: 810 ATKLLELEPLDSSAYVLLSNMYAAASKWDEM-KLARTMMKGHKVKKDPG 857
Score = 229 bits (584), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 151/484 (31%), Positives = 235/484 (48%), Gaps = 37/484 (7%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
MY K AR VFD M R+++SW S+I+G +QNG EAV +++Q+LR G PDQ T
Sbjct: 359 MYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYT 418
Query: 61 FGSIIKAC-CIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMI 119
S++KA + + L +Q+H H IK LI Y+ + A +F
Sbjct: 419 MTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFERH 478
Query: 120 SIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYG 179
+ DL++W++M+ G+TQ + L LF M +QG + ++F L +VF C L G
Sbjct: 479 NF-DLVAWNAMMAGYTQSHDGHKTLKLFALMHKQG-ERSDDFTLATVFKTCGFLFAINQG 536
Query: 180 RQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADS 239
+Q+H K G +++ + DMY KCG + +A+ AF I PD V+W +I+ ++
Sbjct: 537 KQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIEN 596
Query: 240 GDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALY 299
G+ A +F QM +G++PD T +L A + AL QG QIH+ +K+ + +
Sbjct: 597 GEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVG 656
Query: 300 NSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSEN 359
SL+ MY KC ++ DA +F+ I + N+ +WNA+L QH + ET +LFKQM
Sbjct: 657 TSLVDMYAKCGSIDDAYCLFKRI-EMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGI 715
Query: 360 KPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQR 419
KP+ +T +L C+ +GL+ K +H
Sbjct: 716 KPDKVTFIGVLSACSH--------------------------SGLVSEAYKHMRSMHG-- 747
Query: 420 VFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGL 479
D P + +S L +GL +A NL M + + Y +L+AC G
Sbjct: 748 --DYGIKPEIEHYSCLADALGRAGLVKQAENLIESM---SMEASASMYRTLLAACRVQGD 802
Query: 480 VEEG 483
E G
Sbjct: 803 TETG 806
Score = 195 bits (496), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 141/566 (24%), Positives = 268/566 (47%), Gaps = 61/566 (10%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQG-----NEAVVMYIQMLRSGFF 55
MY KCGS+ AR+VFD M R++VSW S+++ Y+Q+ + +A +++ + + +
Sbjct: 83 MYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVY 142
Query: 56 PDQLTFGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDV 115
++T ++K C +G ++ H + K G G L+++Y FG+V +
Sbjct: 143 TSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVL 202
Query: 116 FTMISIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLE 175
F + +D++ W+ M++ + ++G++ EA+ L G+ PNE L LL
Sbjct: 203 FEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGL-NPNEITL--------RLLA 253
Query: 176 PEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAA 235
+I G + G V++ +G + +++ N ++
Sbjct: 254 -----RISGDDSDAGQVKSFANGNDASSV-------------------SEIIFRNKGLSE 289
Query: 236 FADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKE 295
+ SG + + F M+ + D +TF+ +L +L G Q+H +K+G +
Sbjct: 290 YLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLM 349
Query: 296 VALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQML 355
+ + NSL+ MY K A +VF+ +S+ +L+SWN++++ Q+ E LF Q+L
Sbjct: 350 LTVSNSLINMYCKLRKFGFARTVFDNMSER-DLISWNSVIAGIAQNGLEVEAVCLFMQLL 408
Query: 356 FSENKPNMITITNLLGTCAELAS-LEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSV 414
KP+ T+T++L + L L + QVH ++K V D VS LID Y++ +
Sbjct: 409 RCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCM 468
Query: 415 IHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSAC 474
A+ +F+ N ++++W++++ GY S GH+ L LF M G R ++ T V C
Sbjct: 469 KEAEILFER-HNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTC 527
Query: 475 SHIGLVEEG-----WNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFD 529
+ + +G + + + + +L + S ++D+ + G + A+ FD
Sbjct: 528 GFLFAINQGKQVHAYAIKSGYDLDLWVS------SGILDMYVKCGDMSAAQ-----FAFD 576
Query: 530 ----PDITTWKTLLSSCKTHGNVDIA 551
PD W T++S C +G + A
Sbjct: 577 SIPVPDDVAWTTMISGCIENGEEERA 602
Score = 176 bits (447), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 140/491 (28%), Positives = 228/491 (46%), Gaps = 54/491 (10%)
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMIS 120
FG ++ + D+ LG+ HA ++ N LISMY+ G + +A VF +
Sbjct: 43 FG-FLRNAITSSDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMP 101
Query: 121 IKDLISWSSMIRGFTQLGYEI-----EALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLE 175
+DL+SW+S++ + Q + +A LFR +LRQ V + L + C L
Sbjct: 102 DRDLVSWNSILAAYAQSSECVVENIQQAFLLFR-ILRQDVVYTSRMTLSPMLKLC---LH 157
Query: 176 PEY---GRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAI 232
Y HG K GL + F +L ++Y K G + K F ++ D+V WN +
Sbjct: 158 SGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLM 217
Query: 233 IAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGF 292
+ A+ + G EAI + GL P+ IT L LL + + Q+ S+
Sbjct: 218 LKAYLEMGFKEEAIDLSSAFHSSGLNPNEIT-LRLLARISGDDS--DAGQVKSF------ 268
Query: 293 NKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFK 352
+N +DA SV E I +N L + L Q + F
Sbjct: 269 -----------------ANGNDASSVSEIIFRNKGLSEY-------LHSGQYSALLKCFA 304
Query: 353 QMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCG 412
M+ S+ + + +T +L T ++ SL +G QVHC ++K GL L ++VSN LI+MY K
Sbjct: 305 DMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLR 364
Query: 413 SVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLS 472
A+ VFD+ ++ISW+S+I G A +GL EA+ LF ++ G++P++ T VL
Sbjct: 365 KFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLK 424
Query: 473 ACSHIGLVEEGWNLYNTME-EELGIPPAREHF--SCMVDLLARAGCLYEAETFIRKTGFD 529
A S + EG +L + + I + F + ++D +R C+ EAE + F
Sbjct: 425 AASSL---PEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFERHNF- 480
Query: 530 PDITTWKTLLS 540
D+ W +++
Sbjct: 481 -DLVAWNAMMA 490
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 121/257 (47%), Gaps = 3/257 (1%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
MY KCG M A+ FD++ + + V+WT+MISG +NG+ A ++ QM G PD+ T
Sbjct: 561 MYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFT 620
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMIS 120
++ KA + GRQ+HA+ +K L+ MY G + A +F I
Sbjct: 621 IATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIE 680
Query: 121 IKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACS-SLLEPEYG 179
+ ++ +W++M+ G Q G E L LF+ M G+ +P++ V SACS S L E
Sbjct: 681 MMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGI-KPDKVTFIGVLSACSHSGLVSEAY 739
Query: 180 RQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVS-WNAIIAAFAD 238
+ + + +G+ + L D + G + A+ + S + ++AA
Sbjct: 740 KHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRV 799
Query: 239 SGDANEAISIFRQMMHI 255
GD + +++ +
Sbjct: 800 QGDTETGKRVATKLLEL 816
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 73/147 (49%), Gaps = 11/147 (7%)
Query: 402 NGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLG-----HEALNLFRKMR 456
N LI MY+KCGS+ +A+RVFD + +++SW+S++ YA S +A LFR +R
Sbjct: 78 NNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILR 137
Query: 457 NLGVRPNEVTYVGVLSACSHIGLV--EEGWNLYNTMEEELGIPPAREHFSCMVDLLARAG 514
V + +T +L C H G V E ++ Y ++G+ +V++ + G
Sbjct: 138 QDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYAC---KIGLDGDEFVAGALVNIYLKFG 194
Query: 515 CLYEAETFIRKTGFDPDITTWKTLLSS 541
+ E + + + D+ W +L +
Sbjct: 195 KVKEGKVLFEEMPY-RDVVLWNLMLKA 220
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 360 bits (924), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 193/516 (37%), Positives = 310/516 (60%), Gaps = 9/516 (1%)
Query: 78 RQLHAHVIKSG--FGGHLVAQNGLISMYTNFGQVAHASDVFTMISIKDLISWSSMIRGFT 135
+Q+HA ++ G F G L+ + LI ++FG + A VF + + W+++IRG++
Sbjct: 38 KQIHARLLVLGLQFSGFLITK--LIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYS 95
Query: 136 QLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNV 195
+ + +AL ++ +M V P+ F + ACS L + GR +H + G +V
Sbjct: 96 RNNHFQDALLMYSNMQLARV-SPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADV 154
Query: 196 FSGCSLCDMYAKCGFLPSAKTAFYQIESPD--LVSWNAIIAAFADSGDANEAISIFRQMM 253
F L +YAKC L SA+T F + P+ +VSW AI++A+A +G+ EA+ IF QM
Sbjct: 155 FVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMR 214
Query: 254 HIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLH 313
+ + PD + +S+L A T L QG IH+ +VK+G E L SL TMY KC +
Sbjct: 215 KMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVA 274
Query: 314 DALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTC 373
A +F+ + K+ NL+ WNA++S ++ A E +F +M+ + +P+ I+IT+ + C
Sbjct: 275 TAKILFDKM-KSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISAC 333
Query: 374 AELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWS 433
A++ SLE ++ + +S DV +S+ LIDM+AKCGSV A+ VFD T + +V+ WS
Sbjct: 334 AQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWS 393
Query: 434 SLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEE 493
++IVGY + G EA++L+R M GV PN+VT++G+L AC+H G+V EGW +N M +
Sbjct: 394 AMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADH 453
Query: 494 LGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTLLSSCKTHGNVDIAER 553
I P ++H++C++DLL RAG L +A I+ P +T W LLS+CK H +V++ E
Sbjct: 454 -KINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEY 512
Query: 554 AAENILKLDPSNSAALVLLSSIHASAGNWEDVAKLR 589
AA+ + +DPSN+ V LS+++A+A W+ VA++R
Sbjct: 513 AAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVR 548
Score = 217 bits (553), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 120/370 (32%), Positives = 205/370 (55%), Gaps = 4/370 (1%)
Query: 6 GSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTFGSII 65
G + ARQVFD + + W ++I GYS+N +A++MY M + PD TF ++
Sbjct: 67 GDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLL 126
Query: 66 KACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISI--KD 123
KAC + +GR +HA V + GF + QNGLI++Y ++ A VF + + +
Sbjct: 127 KACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERT 186
Query: 124 LISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIH 183
++SW++++ + Q G +EAL +F M + V +P+ L SV +A + L + + GR IH
Sbjct: 187 IVSWTAIVSAYAQNGEPMEALEIFSQMRKMDV-KPDWVALVSVLNAFTCLQDLKQGRSIH 245
Query: 184 GICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDAN 243
K GL SL MYAKCG + +AK F +++SP+L+ WNA+I+ +A +G A
Sbjct: 246 ASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAR 305
Query: 244 EAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLL 303
EAI +F +M++ + PD+I+ S + AC +L Q ++ Y+ + + +V + ++L+
Sbjct: 306 EAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALI 365
Query: 304 TMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNM 363
M+ KC ++ A VF+ + + ++V W+A++ H +A E L++ M PN
Sbjct: 366 DMFAKCGSVEGARLVFDR-TLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPND 424
Query: 364 ITITNLLGTC 373
+T LL C
Sbjct: 425 VTFLGLLMAC 434
Score = 198 bits (503), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 117/374 (31%), Positives = 193/374 (51%), Gaps = 7/374 (1%)
Query: 1 MYGKCGSMKDARQVFDAMHL--RNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQ 58
+Y KC + AR VF+ + L R +VSWT+++S Y+QNG+ EA+ ++ QM + PD
Sbjct: 163 LYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDW 222
Query: 59 LTFGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTM 118
+ S++ A D+ GR +HA V+K G L +MY GQVA A +F
Sbjct: 223 VALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDK 282
Query: 119 ISIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEY 178
+ +LI W++MI G+ + GY EA+ +F +M+ + V +P+ + S SAC+ + E
Sbjct: 283 MKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDV-RPDTISITSAISACAQVGSLEQ 341
Query: 179 GRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFAD 238
R ++ + +VF +L DM+AKCG + A+ F + D+V W+A+I +
Sbjct: 342 ARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGL 401
Query: 239 SGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVAL 298
G A EAIS++R M G+ P+ +TFL LL AC + +G + + N +
Sbjct: 402 HGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQH 461
Query: 299 YNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFS- 357
Y ++ + + +L A V + + + W A+LSAC +H+ E Q LFS
Sbjct: 462 YACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHV-ELGEYAAQQLFSI 520
Query: 358 --ENKPNMITITNL 369
N + + ++NL
Sbjct: 521 DPSNTGHYVQLSNL 534
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 358 bits (919), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 202/595 (33%), Positives = 331/595 (55%), Gaps = 14/595 (2%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
MY K G +A +F+ + +VVSW +++SG+ N A+ ++M +G D T
Sbjct: 120 MYRKAGRFDNALCIFENLVDPDVVSWNTILSGFDDN---QIALNFVVRMKSAGVVFDAFT 176
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMIS 120
+ + + C + LG QL + V+K+G LV N I+MY+ G A VF +S
Sbjct: 177 YSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMS 236
Query: 121 IKDLISWSSMIRGFTQLG-YEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYG 179
KD+ISW+S++ G +Q G + EA+ +FRDM+R+GV + + SV + C + +
Sbjct: 237 FKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGV-ELDHVSFTSVITTCCHETDLKLA 295
Query: 180 RQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADS 239
RQIHG+C K G + G L Y+KCG L + K+ F+Q+ ++VSW +I S
Sbjct: 296 RQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMI-----S 350
Query: 240 GDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALY 299
+ ++A+SIF M G+ P+ +TF+ L+ A + +G++IH +K GF E ++
Sbjct: 351 SNKDDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVG 410
Query: 300 NSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSEN 359
NS +T+Y K L DA FE I+ ++SWNA++S Q+ + E ++F +E
Sbjct: 411 NSFITLYAKFEALEDAKKAFEDITFR-EIISWNAMISGFAQNGFSHEALKMFLSAA-AET 468
Query: 360 KPNMITITNLLGTCA--ELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHA 417
PN T ++L A E S++ G + H +K GL VS+ L+DMYAK G++ +
Sbjct: 469 MPNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDES 528
Query: 418 QRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHI 477
++VF+ N W+S+I Y+ G +NLF KM V P+ VT++ VL+AC+
Sbjct: 529 EKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRK 588
Query: 478 GLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKT 537
G+V++G+ ++N M E + P+ EH+SCMVD+L RAG L EAE + + P + ++
Sbjct: 589 GMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEVPGGPGESMLQS 648
Query: 538 LLSSCKTHGNVDIAERAAENILKLDPSNSAALVLLSSIHASAGNWEDVAKLRKVL 592
+L SC+ HGNV + + AE +++ P S + V + +I+A W+ A++RK +
Sbjct: 649 MLGSCRLHGNVKMGAKVAELAMEMKPELSGSYVQMYNIYAEKEEWDKAAEIRKAM 703
Score = 200 bits (509), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 148/546 (27%), Positives = 262/546 (47%), Gaps = 22/546 (4%)
Query: 11 ARQVFDAMHLRN-VVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFP---DQLTFGSIIK 66
A ++FD RN S IS + A+ ++ + L+ G+F D++T +K
Sbjct: 27 AHKLFDGSSQRNATTSINHSISESLRRNSPARALSIFKENLQLGYFGRHMDEVTLCLALK 86
Query: 67 ACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIKDLIS 126
AC GD+ G Q+H SGF + N ++ MY G+ +A +F + D++S
Sbjct: 87 AC--RGDLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVS 144
Query: 127 WSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGIC 186
W++++ GF +I ++ R M GV + F + S C G Q+
Sbjct: 145 WNTILSGFDD--NQIALNFVVR-MKSAGVV-FDAFTYSTALSFCVGSEGFLLGLQLQSTV 200
Query: 187 AKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDAN-EA 245
K GL ++ G S MY++ G A+ F ++ D++SWN++++ + G EA
Sbjct: 201 VKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEA 260
Query: 246 ISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTM 305
+ IFR MM G+ D ++F S++ C L QIH +K G+ + + N L++
Sbjct: 261 VVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSR 320
Query: 306 YTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMIT 365
Y+KC L SVF +S+ N+VSW ++S+ + +F M F PN +T
Sbjct: 321 YSKCGVLEAVKSVFHQMSER-NVVSWTTMISS-----NKDDAVSIFLNMRFDGVYPNEVT 374
Query: 366 ITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTE 425
L+ ++ G ++H +K+G V + SV N I +YAK ++ A++ F+
Sbjct: 375 FVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDIT 434
Query: 426 NPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIG--LVEEG 483
+ISW+++I G+A +G HEAL +F PNE T+ VL+A + V++G
Sbjct: 435 FREIISWNAMISGFAQNGFSHEALKMFLSAA-AETMPNEYTFGSVLNAIAFAEDISVKQG 493
Query: 484 WNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTLLSSCK 543
+ + +LG+ S ++D+ A+ G + E+E + + W +++S+
Sbjct: 494 QRCHAHL-LKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMS-QKNQFVWTSIISAYS 551
Query: 544 THGNVD 549
+HG+ +
Sbjct: 552 SHGDFE 557
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 357 bits (917), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 195/593 (32%), Positives = 325/593 (54%), Gaps = 6/593 (1%)
Query: 2 YGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTF 61
Y K G KDA +FD M RN VS+ ++ GY+ + + +Y ++ R G + F
Sbjct: 94 YVKAGFDKDALNLFDEMPERNNVSFVTLAQGYA----CQDPIGLYSRLHREGHELNPHVF 149
Query: 62 GSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISI 121
S +K + LH+ ++K G+ + LI+ Y+ G V A VF I
Sbjct: 150 TSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILC 209
Query: 122 KDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQ 181
KD++ W+ ++ + + GY ++L L M R + PN + + A L ++ +
Sbjct: 210 KDIVVWAGIVSCYVENGYFEDSLKLLSCM-RMAGFMPNNYTFDTALKASIGLGAFDFAKG 268
Query: 182 IHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGD 241
+HG K V + G L +Y + G + A F ++ D+V W+ +IA F +G
Sbjct: 269 VHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGF 328
Query: 242 ANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNS 301
NEA+ +F +M ++P+ T S+L C G Q+H +VKVGF+ ++ + N+
Sbjct: 329 CNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNA 388
Query: 302 LLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKP 361
L+ +Y KC + A+ +F +S + N VSWN ++ + G+ F +F++ L ++
Sbjct: 389 LIDVYAKCEKMDTAVKLFAELS-SKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSV 447
Query: 362 NMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVF 421
+T ++ LG CA LAS+++G QVH ++K+ V+VSN LIDMYAKCG + AQ VF
Sbjct: 448 TEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVF 507
Query: 422 DSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVE 481
+ E +V SW++LI GY+ GLG +AL + M++ +PN +T++GVLS CS+ GL++
Sbjct: 508 NEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLID 567
Query: 482 EGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTLLSS 541
+G + +M + GI P EH++CMV LL R+G L +A I ++P + W+ +LS+
Sbjct: 568 QGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSA 627
Query: 542 CKTHGNVDIAERAAENILKLDPSNSAALVLLSSIHASAGNWEDVAKLRKVLDD 594
N + A R+AE ILK++P + A VL+S+++A A W +VA +RK + +
Sbjct: 628 SMNQNNEEFARRSAEEILKINPKDEATYVLVSNMYAGAKQWANVASIRKSMKE 680
Score = 198 bits (503), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 115/349 (32%), Positives = 184/349 (52%), Gaps = 4/349 (1%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
+Y + G M DA +VF+ M +VV W+ MI+ + QNG NEAV ++I+M + P++ T
Sbjct: 291 LYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFT 350
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMIS 120
SI+ C I LG QLH V+K GF + N LI +Y ++ A +F +S
Sbjct: 351 LSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELS 410
Query: 121 IKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGR 180
K+ +SW+++I G+ LG +A +FR+ LR V E S AC+SL + G
Sbjct: 411 SKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQV-SVTEVTFSSALGACASLASMDLGV 469
Query: 181 QIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSG 240
Q+HG+ K + V SL DMYAKCG + A++ F ++E+ D+ SWNA+I+ ++ G
Sbjct: 470 QVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHG 529
Query: 241 DANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQ-IHSYIVKVGFNKEVALY 299
+A+ I M P+ +TFL +L C++ ++QG + S I G + Y
Sbjct: 530 LGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHY 589
Query: 300 NSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETF 348
++ + + L A+ + E I +++ W A+LSA + Q E F
Sbjct: 590 TCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMN--QNNEEF 636
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 144/312 (46%), Gaps = 5/312 (1%)
Query: 164 GSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIES 223
G++ C +P + IH K G ++F+ L + Y K GF A F ++
Sbjct: 53 GAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPE 112
Query: 224 PDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQI 283
+ VS+ + +A + I ++ ++ G + F S L S +
Sbjct: 113 RNNVSFVTLAQGYA----CQDPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICPWL 168
Query: 284 HSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQ 343
HS IVK+G++ + +L+ Y+ C ++ A +VFE I ++V W I+S +++
Sbjct: 169 HSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCK-DIVVWAGIVSCYVENGY 227
Query: 344 AGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNG 403
++ +L M + PN T L L + + VH +K+ VLD V G
Sbjct: 228 FEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVG 287
Query: 404 LIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPN 463
L+ +Y + G + A +VF+ +V+ WS +I + +G +EA++LF +MR V PN
Sbjct: 288 LLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPN 347
Query: 464 EVTYVGVLSACS 475
E T +L+ C+
Sbjct: 348 EFTLSSILNGCA 359
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 111/279 (39%), Gaps = 39/279 (13%)
Query: 202 CDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIP-- 259
C+ +CGF S KTA +ES D +IP
Sbjct: 20 CNRIRQCGF--SVKTAALDLESSD------------------------------SIIPGL 47
Query: 260 DSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVF 319
DS + ++L C IH I+K G ++ N LL Y K DAL++F
Sbjct: 48 DSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLF 107
Query: 320 EAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASL 379
+ + + N VS+ + G RL ++ ++ N T+ L L
Sbjct: 108 DEMPERNN-VSFVTLAQGYACQDPIGLYSRLHRE----GHELNPHVFTSFLKLFVSLDKA 162
Query: 380 EVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGY 439
E+ +H VK G + V LI+ Y+ CGSV A+ VF+ +++ W+ ++ Y
Sbjct: 163 EICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCY 222
Query: 440 AMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIG 478
+G ++L L MR G PN T+ L A +G
Sbjct: 223 VENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLG 261
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 357 bits (915), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 217/603 (35%), Positives = 332/603 (55%), Gaps = 10/603 (1%)
Query: 2 YGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRS-GFFPDQ-L 59
+ K GS+ AR+VF+ M RN V+ ++ G + G EA +++ M P+ +
Sbjct: 253 FAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYV 312
Query: 60 TFGSIIKACCIAGDIYL--GRQLHAHVIKSGFGGHLVA-QNGLISMYTNFGQVAHASDVF 116
S +A ++ L GR++H HVI +G +V NGL++MY G +A A VF
Sbjct: 313 ILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVF 372
Query: 117 TMISIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEP 176
++ KD +SW+SMI G Q G IEA+ ++ M R + P F L S S+C+SL
Sbjct: 373 YFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDIL-PGSFTLISSLSSCASLKWA 431
Query: 177 EYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAF 236
+ G+QIHG K G+ NV +L +YA+ G+L + F + D VSWN+II A
Sbjct: 432 KLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGAL 491
Query: 237 ADSGDA-NEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKE 295
A S + EA+ F G + ITF S+L A +S G QIH +K E
Sbjct: 492 ARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADE 551
Query: 296 VALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQML 355
N+L+ Y KC + +F +++ + V+WN+++S + ++ + L ML
Sbjct: 552 ATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFML 611
Query: 356 FSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVI 415
+ + + +L A +A+LE G +VH SV++ L DV V + L+DMY+KCG +
Sbjct: 612 QTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLD 671
Query: 416 HAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLG-VRPNEVTYVGVLSAC 474
+A R F++ N SW+S+I GYA G G EAL LF M+ G P+ VT+VGVLSAC
Sbjct: 672 YALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSAC 731
Query: 475 SHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDITT 534
SH GL+EEG+ + +M + G+ P EHFSCM D+L RAG L + E FI K P++
Sbjct: 732 SHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLI 791
Query: 535 WKTLLSS-CKTHG-NVDIAERAAENILKLDPSNSAALVLLSSIHASAGNWEDVAKLRKVL 592
W+T+L + C+ +G ++ ++AAE + +L+P N+ VLL +++A+ G WED+ K RK +
Sbjct: 792 WRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKM 851
Query: 593 DDG 595
D
Sbjct: 852 KDA 854
Score = 236 bits (603), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 171/555 (30%), Positives = 277/555 (49%), Gaps = 24/555 (4%)
Query: 2 YGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTF 61
Y + G AR+VFD M LRN VSW ++SGYS+NG+ EA+V M++ G F +Q F
Sbjct: 46 YLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAF 105
Query: 62 GSIIKACCIAGD--IYLGRQLHAHVIKSGFGGHLVAQNGLISMYTN-FGQVAHASDVFTM 118
S+++AC G I GRQ+H + K + V N LISMY G V +A F
Sbjct: 106 VSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGD 165
Query: 119 ISIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEY 178
I +K+ +SW+S+I ++Q G + A +F M G +P E+ GS+ + SL EP+
Sbjct: 166 IEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGS-RPTEYTFGSLVTTACSLTEPDV 224
Query: 179 G--RQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAF 236
QI K GL+ ++F G L +AK G L A+ F Q+E+ + V+ N ++
Sbjct: 225 RLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGL 284
Query: 237 ADSGDANEAISIFRQMMH-IGLIPDS-ITFLSLL--CACTSPMALNQGMQIHSYIVKVGF 292
EA +F M I + P+S + LS + + L +G ++H +++ G
Sbjct: 285 VRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGL 344
Query: 293 -NKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLF 351
+ V + N L+ MY KC ++ DA VF ++ + + VSWN++++ Q+ E +
Sbjct: 345 VDFMVGIGNGLVNMYAKCGSIADARRVFYFMT-DKDSVSWNSMITGLDQNGCFIEAVERY 403
Query: 352 KQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKC 411
K M + P T+ + L +CA L ++G Q+H S+K G+ L+VSVSN L+ +YA+
Sbjct: 404 KSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAET 463
Query: 412 GSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLG-HEALNLFRKMRNLGVRPNEVTYVGV 470
G + +++F S + +SW+S+I A S EA+ F + G + N +T+ V
Sbjct: 464 GYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSV 523
Query: 471 LSAC-----SHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRK 525
LSA +G G L N + +E A ++ + G + E +
Sbjct: 524 LSAVSSLSFGELGKQIHGLALKNNIADEATTENA------LIACYGKCGEMDGCEKIFSR 577
Query: 526 TGFDPDITTWKTLLS 540
D TW +++S
Sbjct: 578 MAERRDNVTWNSMIS 592
Score = 189 bits (479), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 140/490 (28%), Positives = 242/490 (49%), Gaps = 18/490 (3%)
Query: 63 SIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIK 122
S +++C G R H+ + K+ + N LI+ Y G A VF + ++
Sbjct: 8 SFVQSC--VGHRGAARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLR 65
Query: 123 DLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSL--LEPEYGR 180
+ +SW+ ++ G+++ G EAL RDM+++G++ N++ SV AC + + +GR
Sbjct: 66 NCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFS-NQYAFVSVLRACQEIGSVGILFGR 124
Query: 181 QIHGICAKFGLVRNVFSGCSLCDMYAKC-GFLPSAKTAFYQIESPDLVSWNAIIAAFADS 239
QIHG+ K + L MY KC G + A AF IE + VSWN+II+ ++ +
Sbjct: 125 QIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQA 184
Query: 240 GDANEAISIFRQMMHIGLIPDSITFLSLL---CACTSPMALNQGMQIHSYIVKVGFNKEV 296
GD A IF M + G P TF SL+ C+ T P + QI I K G ++
Sbjct: 185 GDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEP-DVRLLEQIMCTIQKSGLLTDL 243
Query: 297 ALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLF---KQ 353
+ + L++ + K +L A VF + + N V+ N ++ ++ K E +LF
Sbjct: 244 FVGSGLVSAFAKSGSLSYARKVFNQM-ETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNS 302
Query: 354 MLFSENKPNMITITNLLG-TCAELASLEVGNQVHCFSVKSGLV-LDVSVSNGLIDMYAKC 411
M+ + +I +++ + AE L+ G +VH + +GLV V + NGL++MYAKC
Sbjct: 303 MIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKC 362
Query: 412 GSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVL 471
GS+ A+RVF + + +SW+S+I G +G EA+ ++ MR + P T + L
Sbjct: 363 GSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSL 422
Query: 472 SACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPD 531
S+C+ + + G ++ +LGI + ++ L A G L E I + + D
Sbjct: 423 SSCASLKWAKLGQQIHGE-SLKLGIDLNVSVSNALMTLYAETGYLNECRK-IFSSMPEHD 480
Query: 532 ITTWKTLLSS 541
+W +++ +
Sbjct: 481 QVSWNSIIGA 490
Score = 185 bits (470), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 131/441 (29%), Positives = 215/441 (48%), Gaps = 7/441 (1%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
MY KCGS+ DAR+VF M ++ VSW SMI+G QNG EAV Y M R P T
Sbjct: 358 MYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFT 417
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMIS 120
S + +C LG+Q+H +K G ++ N L+++Y G + +F+ +
Sbjct: 418 LISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMP 477
Query: 121 IKDLISWSSMIRGFTQLGYEI-EALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYG 179
D +SW+S+I + + EA+ F + R G + N SV SA SSL E G
Sbjct: 478 EHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAG-QKLNRITFSSVLSAVSSLSFGELG 536
Query: 180 RQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQI-ESPDLVSWNAIIAAFAD 238
+QIHG+ K + + +L Y KCG + + F ++ E D V+WN++I+ +
Sbjct: 537 KQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIH 596
Query: 239 SGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVAL 298
+ +A+ + M+ G DS + ++L A S L +GM++H+ V+ +V +
Sbjct: 597 NELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVV 656
Query: 299 YNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQM-LFS 357
++L+ MY+KC L AL F + N SWN+++S +H Q E +LF+ M L
Sbjct: 657 GSALVDMYSKCGRLDYALRFFNTMPVR-NSYSWNSMISGYARHGQGEEALKLFETMKLDG 715
Query: 358 ENKPNMITITNLLGTCAELASLEVG-NQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIH 416
+ P+ +T +L C+ LE G S GL + + + D+ + G +
Sbjct: 716 QTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDK 775
Query: 417 AQRVFDSTE-NPNVISWSSLI 436
+ + PNV+ W +++
Sbjct: 776 LEDFIEKMPMKPNVLIWRTVL 796
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 356 bits (914), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 195/596 (32%), Positives = 330/596 (55%), Gaps = 7/596 (1%)
Query: 4 KCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSG--FFPDQLTF 61
K G + AR +FDAM R VV+WT ++ Y++N +EA ++ QM RS PD +TF
Sbjct: 91 KTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTF 150
Query: 62 GSIIKACCIAGDIYLGRQLHAHVIKSGFGGH--LVAQNGLISMYTNFGQVAHASDVFTMI 119
+++ C A Q+HA +K GF + L N L+ Y ++ A +F I
Sbjct: 151 TTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEI 210
Query: 120 SIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYG 179
KD ++++++I G+ + G E+++LF M RQ +QP++F V A L + G
Sbjct: 211 PEKDSVTFNTLITGYEKDGLYTESIHLFLKM-RQSGHQPSDFTFSGVLKAVVGLHDFALG 269
Query: 180 RQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADS 239
+Q+H + G R+ G + D Y+K + + F ++ D VS+N +I++++ +
Sbjct: 270 QQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQA 329
Query: 240 GDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALY 299
++ FR+M +G + F ++L + +L G Q+H + + + +
Sbjct: 330 DQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVG 389
Query: 300 NSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSEN 359
NSL+ MY KC +A +F+++ + VSW A++S +Q G +LF +M S
Sbjct: 390 NSLVDMYAKCEMFEEAELIFKSLPQRTT-VSWTALISGYVQKGLHGAGLKLFTKMRGSNL 448
Query: 360 KPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQR 419
+ + T +L A ASL +G Q+H F ++SG + +V +GL+DMYAKCGS+ A +
Sbjct: 449 RADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQ 508
Query: 420 VFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGL 479
VF+ + N +SW++LI +A +G G A+ F KM G++P+ V+ +GVL+ACSH G
Sbjct: 509 VFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGF 568
Query: 480 VEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTLL 539
VE+G + M GI P ++H++CM+DLL R G EAE + + F+PD W ++L
Sbjct: 569 VEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVL 628
Query: 540 SSCKTHGNVDIAERAAENILKLDP-SNSAALVLLSSIHASAGNWEDVAKLRKVLDD 594
++C+ H N +AERAAE + ++ ++AA V +S+I+A+AG WE V ++K + +
Sbjct: 629 NACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRE 684
Score = 171 bits (433), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 131/533 (24%), Positives = 236/533 (44%), Gaps = 39/533 (7%)
Query: 78 RQLHAHVIKSGFG-------------------------------GHLVAQNGLISMYTNF 106
R++ A +IK+GF + V+ N +IS +
Sbjct: 33 RRVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKT 92
Query: 107 GQVAHASDVFTMISIKDLISWSSMIRGFTQLGYEIEALYLFRDMLR-QGVYQPNEFVLGS 165
G V+ A D+F + + +++W+ ++ + + + EA LFR M R P+ +
Sbjct: 93 GDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTT 152
Query: 166 VFSACSSLLEPEYGRQIHGICAKFGLVRNVFSGCS--LCDMYAKCGFLPSAKTAFYQIES 223
+ C+ + Q+H K G N F S L Y + L A F +I
Sbjct: 153 LLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPE 212
Query: 224 PDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQI 283
D V++N +I + G E+I +F +M G P TF +L A G Q+
Sbjct: 213 KDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQL 272
Query: 284 HSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQ 343
H+ V GF+++ ++ N +L Y+K + + +F+ + + + VS+N ++S+ Q Q
Sbjct: 273 HALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPE-LDFVSYNVVISSYSQADQ 331
Query: 344 AGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNG 403
+ F++M +L A L+SL++G Q+HC ++ + + V N
Sbjct: 332 YEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNS 391
Query: 404 LIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPN 463
L+DMYAKC A+ +F S +SW++LI GY GL L LF KMR +R +
Sbjct: 392 LVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRAD 451
Query: 464 EVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFI 523
+ T+ VL A + + G L+ + + S +VD+ A+ G + +A
Sbjct: 452 QSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSG-SGLVDMYAKCGSIKDAVQVF 510
Query: 524 RKTGFDPDITTWKTLLSSCKTHGNVDIAERAAENILK--LDPSNSAALVLLSS 574
+ D + +W L+S+ +G+ + A A +++ L P + + L +L++
Sbjct: 511 EEMP-DRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTA 562
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 104/360 (28%), Positives = 172/360 (47%), Gaps = 3/360 (0%)
Query: 2 YGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTF 61
Y K + + R +FD M + VS+ +IS YSQ Q ++ + +M GF F
Sbjct: 295 YSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPF 354
Query: 62 GSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISI 121
+++ + +GRQLH + + L N L+ MY A +F +
Sbjct: 355 ATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQ 414
Query: 122 KDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQ 181
+ +SW+++I G+ Q G L LF M R + ++ +V A +S G+Q
Sbjct: 415 RTTVSWTALISGYVQKGLHGAGLKLFTKM-RGSNLRADQSTFATVLKASASFASLLLGKQ 473
Query: 182 IHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGD 241
+H + G + NVFSG L DMYAKCG + A F ++ + VSWNA+I+A AD+GD
Sbjct: 474 LHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGD 533
Query: 242 ANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKV-GFNKEVALYN 300
AI F +M+ GL PDS++ L +L AC+ + QG + + + G + Y
Sbjct: 534 GEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYA 593
Query: 301 SLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENK 360
+L + + +A + + + + + W+++L+AC HK R ++ LFS K
Sbjct: 594 CMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEK-LFSMEK 652
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 118/237 (49%), Gaps = 3/237 (1%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
MY KC ++A +F ++ R VSWT++ISGY Q G + ++ +M S DQ T
Sbjct: 395 MYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQST 454
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMIS 120
F +++KA + LG+QLHA +I+SG ++ + +GL+ MY G + A VF +
Sbjct: 455 FATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMP 514
Query: 121 IKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGR 180
++ +SW+++I G A+ F M+ G+ QP+ + V +ACS E G
Sbjct: 515 DRNAVSWNALISAHADNGDGEAAIGAFAKMIESGL-QPDSVSILGVLTACSHCGFVEQGT 573
Query: 181 Q-IHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIE-SPDLVSWNAIIAA 235
+ + +G+ + D+ + G A+ ++ PD + W++++ A
Sbjct: 574 EYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNA 630
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 356 bits (913), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 199/592 (33%), Positives = 325/592 (54%), Gaps = 5/592 (0%)
Query: 1 MYGKCGSMKDARQVFDAMHLR-NVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGF-FPDQ 58
+Y C AR VF+ +R +V W S++SGYS+N ++ + ++ ++L PD
Sbjct: 48 VYFTCKDHCSARHVFENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDS 107
Query: 59 LTFGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTM 118
TF ++IKA G +LGR +H V+KSG+ +V + L+ MY F ++ VF
Sbjct: 108 FTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDE 167
Query: 119 ISIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEY 178
+ +D+ SW+++I F Q G +AL LF M G ++PN L SACS LL E
Sbjct: 168 MPERDVASWNTVISCFYQSGEAEKALELFGRMESSG-FEPNSVSLTVAISACSRLLWLER 226
Query: 179 GRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFAD 238
G++IH C K G + + +L DMY KC L A+ F ++ LV+WN++I +
Sbjct: 227 GKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVA 286
Query: 239 SGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVAL 298
GD+ + I +M+ G P T S+L AC+ L G IH Y+++ N ++ +
Sbjct: 287 KGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYV 346
Query: 299 YNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSE 358
SL+ +Y KC + A +VF K+ SWN ++S+ + + ++ QM+
Sbjct: 347 NCSLIDLYFKCGEANLAETVFSKTQKDVA-ESWNVMISSYISVGNWFKAVEVYDQMVSVG 405
Query: 359 NKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQ 418
KP+++T T++L C++LA+LE G Q+H +S L D + + L+DMY+KCG+ A
Sbjct: 406 VKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAF 465
Query: 419 RVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIG 478
R+F+S +V+SW+ +I Y G EAL F +M+ G++P+ VT + VLSAC H G
Sbjct: 466 RIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAG 525
Query: 479 LVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPD-ITTWKT 537
L++EG ++ M + GI P EH+SCM+D+L RAG L EA I++T D T
Sbjct: 526 LIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAELLST 585
Query: 538 LLSSCKTHGNVDIAERAAENILKLDPSNSAALVLLSSIHASAGNWEDVAKLR 589
L S+C H + +R A +++ P +++ ++L +++AS +W+ ++R
Sbjct: 586 LFSACCLHLEHSLGDRIARLLVENYPDDASTYMVLFNLYASGESWDAARRVR 637
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 142/290 (48%), Gaps = 4/290 (1%)
Query: 260 DSITFLSLLCACT-SPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSV 318
+S LSLL CT S +L + +H I+ +G ++V L SL+ +Y C + A V
Sbjct: 2 ESSKLLSLLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHV 61
Query: 319 FEAISKNANLVSWNAILSACLQHKQAGETFRLFKQML-FSENKPNMITITNLLGTCAELA 377
FE +++ WN+++S ++ +T +FK++L S P+ T N++ L
Sbjct: 62 FENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALG 121
Query: 378 SLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIV 437
+G +H VKSG V DV V++ L+ MYAK ++ +VFD +V SW+++I
Sbjct: 122 REFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVIS 181
Query: 438 GYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIP 497
+ SG +AL LF +M + G PN V+ +SACS + +E G ++ ++ G
Sbjct: 182 CFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKK-GFE 240
Query: 498 PAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTLLSSCKTHGN 547
S +VD+ + CL A +K + W +++ G+
Sbjct: 241 LDEYVNSALVDMYGKCDCLEVAREVFQKMP-RKSLVAWNSMIKGYVAKGD 289
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 355 bits (912), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 193/533 (36%), Positives = 303/533 (56%), Gaps = 6/533 (1%)
Query: 63 SIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIK 122
SI++ C G G Q+H +++KSG G +L+ N LI MY + A VF + +
Sbjct: 11 SILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPER 70
Query: 123 DLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQI 182
+++SWS+++ G G +L LF +M RQG+Y PNEF + AC L E G QI
Sbjct: 71 NVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIY-PNEFTFSTNLKACGLLNALEKGLQI 129
Query: 183 HGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDA 242
HG C K G V G SL DMY+KCG + A+ F +I L+SWNA+IA F +G
Sbjct: 130 HGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYG 189
Query: 243 NEAISIFRQMM--HIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFN--KEVAL 298
++A+ F M +I PD T SLL AC+S + G QIH ++V+ GF+ +
Sbjct: 190 SKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATI 249
Query: 299 YNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSE 358
SL+ +Y KC L A F+ I K ++SW++++ Q + E LFK++
Sbjct: 250 TGSLVDLYVKCGYLFSARKAFDQI-KEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELN 308
Query: 359 NKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQ 418
++ + +++++G A+ A L G Q+ +VK L+ SV N ++DMY KCG V A+
Sbjct: 309 SQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAE 368
Query: 419 RVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIG 478
+ F + +VISW+ +I GY GLG +++ +F +M + P+EV Y+ VLSACSH G
Sbjct: 369 KCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSG 428
Query: 479 LVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTL 538
+++EG L++ + E GI P EH++C+VDLL RAG L EA+ I P++ W+TL
Sbjct: 429 MIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTL 488
Query: 539 LSSCKTHGNVDIAERAAENILKLDPSNSAALVLLSSIHASAGNWEDVAKLRKV 591
LS C+ HG++++ + + +L++D N A V++S+++ AG W + R++
Sbjct: 489 LSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNAREL 541
Score = 229 bits (584), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 136/442 (30%), Positives = 236/442 (53%), Gaps = 8/442 (1%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
MY KC A +VFD+M RNVVSW++++SG+ NG ++ ++ +M R G +P++ T
Sbjct: 50 MYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFT 109
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMIS 120
F + +KAC + + G Q+H +K GF + N L+ MY+ G++ A VF I
Sbjct: 110 FSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIV 169
Query: 121 IKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQ-PNEFVLGSVFSACSSLLEPEYG 179
+ LISW++MI GF GY +AL F M + + P+EF L S+ ACSS G
Sbjct: 170 DRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAG 229
Query: 180 RQIHGICAKFGL---VRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAF 236
+QIHG + G +G SL D+Y KCG+L SA+ AF QI+ ++SW+++I +
Sbjct: 230 KQIHGFLVRSGFHCPSSATITG-SLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGY 288
Query: 237 ADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEV 296
A G+ EA+ +F+++ + DS S++ L QG Q+ + VK+ E
Sbjct: 289 AQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLET 348
Query: 297 ALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLF 356
++ NS++ MY KC + +A F A + +++SW +++ +H ++ R+F +ML
Sbjct: 349 SVLNSVVDMYLKCGLVDEAEKCF-AEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLR 407
Query: 357 SENKPNMITITNLLGTCAELASLEVGNQVHCFSVKS-GLVLDVSVSNGLIDMYAKCGSVI 415
+P+ + +L C+ ++ G ++ +++ G+ V ++D+ + G +
Sbjct: 408 HNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLK 467
Query: 416 HAQRVFDSTE-NPNVISWSSLI 436
A+ + D+ PNV W +L+
Sbjct: 468 EAKHLIDTMPIKPNVGIWQTLL 489
Score = 191 bits (485), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 124/427 (29%), Positives = 220/427 (51%), Gaps = 16/427 (3%)
Query: 158 PNEFV-LGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKT 216
PN+ L S+ C+ + G Q+H K G N+ + L DMY KC A
Sbjct: 3 PNQRQNLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYK 62
Query: 217 AFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMA 276
F + ++VSW+A+++ +GD ++S+F +M G+ P+ TF + L AC A
Sbjct: 63 VFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNA 122
Query: 277 LNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILS 336
L +G+QIH + +K+GF V + NSL+ MY+KC +++A VF I + +L+SWNA+++
Sbjct: 123 LEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIV-DRSLISWNAMIA 181
Query: 337 ACLQH---KQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSG 393
+ +A +TF + ++ E +P+ T+T+LL C+ + G Q+H F V+SG
Sbjct: 182 GFVHAGYGSKALDTFGMMQEANIKE-RPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSG 240
Query: 394 LVLDVS--VSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNL 451
S ++ L+D+Y KCG + A++ FD + +ISWSSLI+GYA G EA+ L
Sbjct: 241 FHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGL 300
Query: 452 FRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREH--FSCMVDL 509
F++++ L + + ++ + L+ +G + + +P E + +VD+
Sbjct: 301 FKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALA---VKLPSGLETSVLNSVVDM 357
Query: 510 LARAGCLYEAETFIRKTGFDPDITTWKTLLSSCKTHGNVDIAERAAENILK--LDPSNSA 567
+ G + EAE + D+ +W +++ HG + R +L+ ++P
Sbjct: 358 YLKCGLVDEAEKCFAEMQL-KDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVC 416
Query: 568 ALVLLSS 574
L +LS+
Sbjct: 417 YLAVLSA 423
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 353 bits (905), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 199/595 (33%), Positives = 330/595 (55%), Gaps = 6/595 (1%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQML-RSGFFPDQL 59
M+ + G++ DA VF M RN+ SW ++ GY++ G +EA+ +Y +ML G PD
Sbjct: 138 MFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVY 197
Query: 60 TFGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMI 119
TF +++ C D+ G+++H HV++ G+ + N LI+MY G V A +F +
Sbjct: 198 TFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRM 257
Query: 120 SIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYG 179
+D+ISW++MI G+ + G E L LF M R P+ L SV SAC L + G
Sbjct: 258 PRRDIISWNAMISGYFENGMCHEGLELFFAM-RGLSVDPDLMTLTSVISACELLGDRRLG 316
Query: 180 RQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADS 239
R IH G ++ SL MY G A+ F ++E D+VSW +I+ + +
Sbjct: 317 RDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYN 376
Query: 240 GDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALY 299
++AI +R M + PD IT ++L AC + L+ G+++H +K V +
Sbjct: 377 FLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVA 436
Query: 300 NSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSEN 359
N+L+ MY+KC + AL +F I + N++SW +I++ + + E +QM +
Sbjct: 437 NNLINMYSKCKCIDKALDIFHNIPRK-NVISWTSIIAGLRLNNRCFEALIFLRQMKMTL- 494
Query: 360 KPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQR 419
+PN IT+T L CA + +L G ++H +++G+ LD + N L+DMY +CG + A
Sbjct: 495 QPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWS 554
Query: 420 VFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGL 479
F+S + +V SW+ L+ GY+ G G + LF +M VRP+E+T++ +L CS +
Sbjct: 555 QFNS-QKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQM 613
Query: 480 VEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTLL 539
V +G ++ ME+ G+ P +H++C+VDLL RAG L EA FI+K PD W LL
Sbjct: 614 VRQGLMYFSKMED-YGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALL 672
Query: 540 SSCKTHGNVDIAERAAENILKLDPSNSAALVLLSSIHASAGNWEDVAKLRKVLDD 594
++C+ H +D+ E +A++I +LD + +LL +++A G W +VAK+R+++ +
Sbjct: 673 NACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKE 727
Score = 213 bits (543), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 150/577 (25%), Positives = 287/577 (49%), Gaps = 19/577 (3%)
Query: 30 ISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTFGSIIKACCIAGDIYLGRQLHAHVIKSGF 89
+ G NG+ EA+ + M D+ F ++++ C G ++++ + S
Sbjct: 66 LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMS 125
Query: 90 GGHLVAQNGLISMYTNFGQVAHASDVFTMISIKDLISWSSMIRGFTQLGYEIEALYLFRD 149
+ N ++M+ FG + A VF +S ++L SW+ ++ G+ + GY EA+ L+
Sbjct: 126 SLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHR 185
Query: 150 MLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCG 209
ML G +P+ + V C + + G+++H ++G ++ +L MY KCG
Sbjct: 186 MLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCG 245
Query: 210 FLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLC 269
+ SA+ F ++ D++SWNA+I+ + ++G +E + +F M + + PD +T S++
Sbjct: 246 DVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVIS 305
Query: 270 ACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLV 329
AC G IH+Y++ GF ++++ NSL MY + +A +F + + ++V
Sbjct: 306 ACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERK-DIV 364
Query: 330 SWNAILSACLQH---KQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVH 386
SW ++S + +A +T+R+ Q KP+ IT+ +L CA L L+ G ++H
Sbjct: 365 SWTTMISGYEYNFLPDKAIDTYRMMDQ---DSVKPDEITVAAVLSACATLGDLDTGVELH 421
Query: 387 CFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGH 446
++K+ L+ V V+N LI+MY+KC + A +F + NVISW+S+I G ++
Sbjct: 422 KLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCF 481
Query: 447 EALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLY-NTMEEELGIPPAREHFSC 505
EAL R+M+ + ++PN +T L+AC+ IG + G ++ + + +G+ +
Sbjct: 482 EALIFLRQMK-MTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLP--NA 538
Query: 506 MVDLLARAGCLYEAETFIRKTGFDPDITTWKTLLSSCKTHGN----VDIAERAAENILKL 561
++D+ R G + A + D+T+W LL+ G V++ +R ++ ++
Sbjct: 539 LLDMYVRCGRMNTAWSQFNSQ--KKDVTSWNILLTGYSERGQGSMVVELFDRMVKS--RV 594
Query: 562 DPSNSAALVLLSSIHASAGNWEDVAKLRKVLDDGYDP 598
P + LL S + + K+ D G P
Sbjct: 595 RPDEITFISLLCGCSKSQMVRQGLMYFSKMEDYGVTP 631
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 351 bits (901), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 193/596 (32%), Positives = 338/596 (56%), Gaps = 12/596 (2%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQ-GNEAVVMYIQMLRSGFFPDQL 59
MY +CGS++ AR+VFD M RNVVS+ ++ S YS+N + A + M P+
Sbjct: 141 MYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSS 200
Query: 60 TFGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMI 119
TF S+++ C + D+ +G L++ +IK G+ ++V Q ++ MY++ G + A +F +
Sbjct: 201 TFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCV 260
Query: 120 SIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYG 179
+ +D ++W++MI G + + L FR+ML GV P +F V + CS L G
Sbjct: 261 NNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGV-DPTQFTYSIVLNGCSKLGSYSLG 319
Query: 180 RQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADS 239
+ IH + ++ +L DMY CG + A F +I +P+LVSWN+II+ +++
Sbjct: 320 KLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSEN 379
Query: 240 GDANEAISIFRQMMHIGLI-PDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVAL 298
G +A+ ++R+++ + PD TF + + A P G +H + K+G+ + V +
Sbjct: 380 GFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFV 439
Query: 299 YNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGET---FRLFKQML 355
+LL+MY K A VF+ + K ++V W ++ + H + G + + F +M
Sbjct: 440 GTTLLSMYFKNREAESAQKVFDVM-KERDVVLWTEMI---VGHSRLGNSELAVQFFIEMY 495
Query: 356 FSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVI 415
+N+ + ++++++G C+++A L G HC ++++G +SV L+DMY K G
Sbjct: 496 REKNRSDGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYE 555
Query: 416 HAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACS 475
A+ +F NP++ W+S++ Y+ G+ +AL+ F ++ G P+ VTY+ +L+ACS
Sbjct: 556 TAETIFSLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAACS 615
Query: 476 HIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGF-DPDITT 534
H G +G L+N M+E+ GI +H+SCMV+L+++AG + EA I ++ +
Sbjct: 616 HRGSTLQGKFLWNQMKEQ-GIKAGFKHYSCMVNLVSKAGLVDEALELIEQSPPGNNQAEL 674
Query: 535 WKTLLSSCKTHGNVDIAERAAENILKLDPSNSAALVLLSSIHASAGNWEDVAKLRK 590
W+TLLS+C N+ I AAE ILKLDP ++A +LLS+++A G WEDVA++R+
Sbjct: 675 WRTLLSACVNTRNLQIGLYAAEQILKLDPEDTATHILLSNLYAVNGRWEDVAEMRR 730
Score = 210 bits (535), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 155/574 (27%), Positives = 270/574 (47%), Gaps = 21/574 (3%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSG------F 54
MY +C S++ AR+VFD M RN+V+ + + + G+ ++ Q+++ G F
Sbjct: 31 MYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSS---LHSQIIKLGSFQMIFF 87
Query: 55 FPDQLTFGSII---KACCIAGDIYLGRQLHAHVIKSGFGGHL---VAQNGLISMYTNFGQ 108
P S++ + C + RQ+HA V+ +G G A N LISMY G
Sbjct: 88 MPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMYVRCGS 147
Query: 109 VAHASDVFTMISIKDLISWSSMIRGFTQ-LGYEIEALYLFRDMLRQGVYQPNEFVLGSVF 167
+ A VF + ++++S++++ +++ + A L M + V +PN S+
Sbjct: 148 LEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYV-KPNSSTFTSLV 206
Query: 168 SACSSLLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLV 227
C+ L + G ++ K G NV S+ MY+ CG L SA+ F + + D V
Sbjct: 207 QVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAV 266
Query: 228 SWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYI 287
+WN +I + + + FR M+ G+ P T+ +L C+ + + G IH+ I
Sbjct: 267 AWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARI 326
Query: 288 VKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGET 347
+ ++ L N+LL MY C ++ +A VF I N NLVSWN+I+S C ++ +
Sbjct: 327 IVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRI-HNPNLVSWNSIISGCSENGFGEQA 385
Query: 348 FRLFKQML-FSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLID 406
+++++L S +P+ T + + AE G +H K G V V L+
Sbjct: 386 MLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLS 445
Query: 407 MYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVT 466
MY K AQ+VFD + +V+ W+ +IVG++ G A+ F +M R + +
Sbjct: 446 MYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFS 505
Query: 467 YVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKT 526
V+ ACS + ++ +G +++ + G +VD+ + G AET I
Sbjct: 506 LSSVIGACSDMAMLRQG-EVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAET-IFSL 563
Query: 527 GFDPDITTWKTLLSSCKTHGNVDIAERAAENILK 560
+PD+ W ++L + HG V+ A E IL+
Sbjct: 564 ASNPDLKCWNSMLGAYSQHGMVEKALSFFEQILE 597
Score = 175 bits (443), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 107/392 (27%), Positives = 200/392 (51%), Gaps = 11/392 (2%)
Query: 95 AQNGLISMYTNFGQVAHASDVFTMISIKDLISWS--SMIRGFTQLGYEIEALYLFRDMLR 152
A N LISMY + A VF + +++++ S + + +G + + + +
Sbjct: 24 ANNNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQIIKLGSFQ 83
Query: 153 QGVYQPNEFVLGSVFS---ACSSLLEPEYGRQIHGICAKFGL---VRNVFSGCSLCDMYA 206
+ P + SV C S+ + RQIH + G + ++ +L MY
Sbjct: 84 MIFFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMYV 143
Query: 207 KCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGD-ANEAISIFRQMMHIGLIPDSITFL 265
+CG L A+ F ++ ++VS+NA+ +A++ + D A+ A + M + P+S TF
Sbjct: 144 RCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFT 203
Query: 266 SLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKN 325
SL+ C + G ++S I+K+G++ V + S+L MY+ C +L A +F+ ++ N
Sbjct: 204 SLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVN-N 262
Query: 326 ANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQV 385
+ V+WN ++ L++ + + F+ ML S P T + +L C++L S +G +
Sbjct: 263 RDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLI 322
Query: 386 HCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLG 445
H + S + D+ + N L+DMY CG + A VF NPN++SW+S+I G + +G G
Sbjct: 323 HARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFG 382
Query: 446 HEALNLFRKMRNLGV-RPNEVTYVGVLSACSH 476
+A+ ++R++ + RP+E T+ +SA +
Sbjct: 383 EQAMLMYRRLLRMSTPRPDEYTFSAAISATAE 414
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 101/396 (25%), Positives = 191/396 (48%), Gaps = 17/396 (4%)
Query: 196 FSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFA----DSGDANEAISI--F 249
++ +L MY +C L A+ F ++ ++V+ + A F S ++ I + F
Sbjct: 23 YANNNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQIIKLGSF 82
Query: 250 RQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVG---FNKEVALYNSLLTMY 306
+ + + L + + + L C S L + QIH+ ++ G + N+L++MY
Sbjct: 83 QMIFFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMY 142
Query: 307 TKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQ-AGETFRLFKQMLFSENKPNMIT 365
+C +L A VF+ + + N+VS+NA+ SA ++ A F L M F KPN T
Sbjct: 143 VRCGSLEQARKVFDKM-PHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSST 201
Query: 366 ITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTE 425
T+L+ CA L + +G+ ++ +K G +V V ++ MY+ CG + A+R+FD
Sbjct: 202 FTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVN 261
Query: 426 NPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWN 485
N + ++W+++IVG + + L FR M GV P + TY VL+ CS +G G
Sbjct: 262 NRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKL 321
Query: 486 LYNTM--EEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTLLSSCK 543
++ + + L P + ++D+ G + EA ++ +P++ +W +++S C
Sbjct: 322 IHARIIVSDSLADLPLD---NALLDMYCSCGDMREA-FYVFGRIHNPNLVSWNSIISGCS 377
Query: 544 THGNVDIAERAAENILKLDPSNSAALVLLSSIHASA 579
+G + A +L++ ++I A+A
Sbjct: 378 ENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATA 413
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 350 bits (897), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 186/519 (35%), Positives = 302/519 (58%), Gaps = 6/519 (1%)
Query: 80 LHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIKDLISWSSMIRGFTQLGY 139
+H + I +GF +L ++ LI +Y G V HA +F IS +D++SW++MI F++ GY
Sbjct: 34 IHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGY 93
Query: 140 EIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFSGC 199
+AL LF++M R+ V + N+F GSV +C L + G QIHG K N+
Sbjct: 94 HPDALLLFKEMHREDV-KANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRS 152
Query: 200 SLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIP 259
+L +YA+CG + A+ F ++ DLVSWNA+I + + A+ + S+F+ M+ G P
Sbjct: 153 ALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKP 212
Query: 260 DSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVF 319
D TF SLL A L ++H +K+GF + AL SL+ Y KC +L +A +
Sbjct: 213 DCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLH 272
Query: 320 EAISKNANLVSWNAILSACLQHKQ-AGETFRLFKQMLFSENKPNMITITNLLGTCAELAS 378
E +K +L+S A+++ Q + F +FK M+ + K + + ++++L C +AS
Sbjct: 273 EG-TKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIAS 331
Query: 379 LEVGNQVHCFSVKSGLV-LDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIV 437
+ +G Q+H F++KS + DV++ N LIDMYAK G + A F+ + +V SW+SLI
Sbjct: 332 VTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIA 391
Query: 438 GYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIP 497
GY G +A++L+ +M + ++PN+VT++ +LSACSH G E GW +Y+TM + GI
Sbjct: 392 GYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLSACSHTGQTELGWKIYDTMINKHGIE 451
Query: 498 PAREHFSCMVDLLARAGCLYEAETFIR-KTGF-DPDITTWKTLLSSCKTHGNVDIAERAA 555
EH SC++D+LAR+G L EA IR K G +TW L +C+ HGNV +++ AA
Sbjct: 452 AREEHLSCIIDMLARSGYLEEAYALIRSKEGIVSLSSSTWGAFLDACRRHGNVQLSKVAA 511
Query: 556 ENILKLDPSNSAALVLLSSIHASAGNWEDVAKLRKVLDD 594
+L ++P + L+S++A+ G W++ RK++ +
Sbjct: 512 TQLLSMEPRKPVNYINLASVYAANGAWDNALNTRKLMKE 550
Score = 211 bits (537), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 147/499 (29%), Positives = 255/499 (51%), Gaps = 11/499 (2%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
+Y K G +K AR++FD + R+VVSWT+MIS +S+ G +A++++ +M R +Q T
Sbjct: 56 LYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFT 115
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMIS 120
+GS++K+C G + G Q+H V K G+L+ ++ L+S+Y G++ A F +
Sbjct: 116 YGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMK 175
Query: 121 IKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGR 180
+DL+SW++MI G+T + LF+ ML +G +P+ F GS+ A + E
Sbjct: 176 ERDLVSWNAMIDGYTANACADTSFSLFQLMLTEG-KKPDCFTFGSLLRASIVVKCLEIVS 234
Query: 181 QIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSG 240
++HG+ K G R+ SL + Y KCG L +A + DL+S A+I F+
Sbjct: 235 ELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQN 294
Query: 241 D-ANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVG-FNKEVAL 298
+ ++A IF+ M+ + D + S+L CT+ ++ G QIH + +K +VAL
Sbjct: 295 NCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVAL 354
Query: 299 YNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSE 358
NSL+ MY K + DA+ FE + K ++ SW ++++ +H + L+ +M
Sbjct: 355 GNSLIDMYAKSGEIEDAVLAFEEM-KEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHER 413
Query: 359 NKPNMITITNLLGTCAELASLEVGNQVHCFSV-KSGLVLDVSVSNGLIDMYAKCGSVIHA 417
KPN +T +LL C+ E+G +++ + K G+ + +IDM A+ G + A
Sbjct: 414 IKPNDVTFLSLLSACSHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEEA 473
Query: 418 QRVFDSTENPNVISWSSLIVGYAMSGL---GHEALNLFRKMRNLGVRPNE-VTYVGVLSA 473
+ S E ++S SS G + G+ L+ + L + P + V Y+ + S
Sbjct: 474 YALIRSKE--GIVSLSSSTWGAFLDACRRHGNVQLSKVAATQLLSMEPRKPVNYINLASV 531
Query: 474 CSHIGLVEEGWNLYNTMEE 492
+ G + N M+E
Sbjct: 532 YAANGAWDNALNTRKLMKE 550
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 109/210 (51%), Gaps = 1/210 (0%)
Query: 264 FLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAIS 323
+L L C+ Q + IH + GF + L + L+ +Y K ++ A +F+ IS
Sbjct: 15 YLKALKLCSYQNVKKQLLLIHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRIS 74
Query: 324 KNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGN 383
K ++VSW A++S + + LFK+M + K N T ++L +C +L L+ G
Sbjct: 75 KR-DVVSWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGM 133
Query: 384 QVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSG 443
Q+H K ++ V + L+ +YA+CG + A+ FDS + +++SW+++I GY +
Sbjct: 134 QIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANA 193
Query: 444 LGHEALNLFRKMRNLGVRPNEVTYVGVLSA 473
+ +LF+ M G +P+ T+ +L A
Sbjct: 194 CADTSFSLFQLMLTEGKKPDCFTFGSLLRA 223
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 349 bits (896), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 196/536 (36%), Positives = 308/536 (57%), Gaps = 8/536 (1%)
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMIS 120
F +++ C I + + AH++KSGF ++ + L+ G + +A VF +S
Sbjct: 68 FSQLLRQCIDERSISGIKTIQAHMLKSGFPAE-ISGSKLVDASLKCGDIDYARQVFDGMS 126
Query: 121 IKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSL-LEPEYG 179
+ +++W+S+I + EA+ ++R M+ V P+E+ L SVF A S L LE E
Sbjct: 127 ERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVL-PDEYTLSSVFKAFSDLSLEKEAQ 185
Query: 180 RQIHGICAKFGL-VRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFAD 238
R HG+ GL V NVF G +L DMY K G AK ++E D+V A+I ++
Sbjct: 186 RS-HGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQ 244
Query: 239 SGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVAL 298
G+ EA+ F+ M+ + P+ T+ S+L +C + + G IH +VK GF +A
Sbjct: 245 KGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALAS 304
Query: 299 YNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSE 358
SLLTMY +CS + D+L VF+ I + N VSW +++S +Q+ + F++M+
Sbjct: 305 QTSLLTMYLRCSLVDDSLRVFKCI-EYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDS 363
Query: 359 NKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQ 418
KPN T+++ L C+ LA E G Q+H K G D +GLID+Y KCG A+
Sbjct: 364 IKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMAR 423
Query: 419 RVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIG 478
VFD+ +VIS +++I YA +G G EAL+LF +M NLG++PN+VT + VL AC++
Sbjct: 424 LVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACNNSR 483
Query: 479 LVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTL 538
LVEEG L+++ ++ I +H++CMVDLL RAG L EAE + +PD+ W+TL
Sbjct: 484 LVEEGCELFDSFRKD-KIMLTNDHYACMVDLLGRAGRLEEAEMLTTEV-INPDLVLWRTL 541
Query: 539 LSSCKTHGNVDIAERAAENILKLDPSNSAALVLLSSIHASAGNWEDVAKLRKVLDD 594
LS+CK H V++AER IL+++P + L+L+S+++AS G W V +++ + D
Sbjct: 542 LSACKVHRKVEMAERITRKILEIEPGDEGTLILMSNLYASTGKWNRVIEMKSKMKD 597
Score = 219 bits (558), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 125/378 (33%), Positives = 205/378 (54%), Gaps = 6/378 (1%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
MY K G ++A+ V D + ++VV T++I GYSQ G+ EAV + ML P++ T
Sbjct: 210 MYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYT 269
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMIS 120
+ S++ +C DI G+ +H ++KSGF L +Q L++MY V + VF I
Sbjct: 270 YASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIE 329
Query: 121 IKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGR 180
+ +SW+S+I G Q G E AL FR M+R + +PN F L S CS+L E GR
Sbjct: 330 YPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSI-KPNSFTLSSALRGCSNLAMFEEGR 388
Query: 181 QIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSG 240
QIHGI K+G R+ ++G L D+Y KCG A+ F + D++S N +I ++A +G
Sbjct: 389 QIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNG 448
Query: 241 DANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYN 300
EA+ +F +M+++GL P+ +T LS+L AC + + +G ++ K Y
Sbjct: 449 FGREALDLFERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFRKDKIMLTNDHYA 508
Query: 301 SLLTMYTKCSNLHDA-LSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSE- 358
++ + + L +A + E I N +LV W +LSAC H++ R+ +++L E
Sbjct: 509 CMVDLLGRAGRLEEAEMLTTEVI--NPDLVLWRTLLSACKVHRKVEMAERITRKILEIEP 566
Query: 359 -NKPNMITITNLLGTCAE 375
++ +I ++NL + +
Sbjct: 567 GDEGTLILMSNLYASTGK 584
Score = 211 bits (537), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 139/495 (28%), Positives = 248/495 (50%), Gaps = 14/495 (2%)
Query: 4 KCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTFGS 63
KCG + ARQVFD M R++V+W S+I+ ++ + EAV MY M+ + PD+ T S
Sbjct: 111 KCGDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSS 170
Query: 64 IIKACCIAGDIYLGRQLH-AHVIKSGFG---GHLVAQNGLISMYTNFGQVAHASDVFTMI 119
+ KA D+ L ++ +H + G ++ + L+ MY FG+ A V +
Sbjct: 171 VFKA---FSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRV 227
Query: 120 SIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYG 179
KD++ +++I G++Q G + EA+ F+ ML + V QPNE+ SV +C +L + G
Sbjct: 228 EEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKV-QPNEYTYASVLISCGNLKDIGNG 286
Query: 180 RQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADS 239
+ IHG+ K G + S SL MY +C + + F IE P+ VSW ++I+ +
Sbjct: 287 KLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQN 346
Query: 240 GDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALY 299
G A+ FR+MM + P+S T S L C++ +G QIH + K GF+++
Sbjct: 347 GREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAG 406
Query: 300 NSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSEN 359
+ L+ +Y KC A VF+ +S+ +++S N ++ + Q+ E LF++M+
Sbjct: 407 SGLIDLYGKCGCSDMARLVFDTLSE-VDVISLNTMIYSYAQNGFGREALDLFERMINLGL 465
Query: 360 KPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQR 419
+PN +T+ ++L C +E G ++ K ++L ++D+ + G + A+
Sbjct: 466 QPNDVTVLSVLLACNNSRLVEEGCELFDSFRKDKIMLTNDHYACMVDLLGRAGRLEEAEM 525
Query: 420 VFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGL 479
+ NP+++ W +L+ + A + RK+ L + P + G L S++
Sbjct: 526 LTTEVINPDLVLWRTLLSACKVHRKVEMAERITRKI--LEIEPGD---EGTLILMSNLYA 580
Query: 480 VEEGWNLYNTMEEEL 494
WN M+ ++
Sbjct: 581 STGKWNRVIEMKSKM 595
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 349 bits (895), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 190/593 (32%), Positives = 319/593 (53%), Gaps = 39/593 (6%)
Query: 2 YGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTF 61
Y + DA ++F + ++N +SW ++ISGY ++G EA ++ +M G P++ T
Sbjct: 69 YSNSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTL 128
Query: 62 GSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVF-TMIS 120
GS+++ C + G Q+H H IK+GF + NGL++MY +++ A +F TM
Sbjct: 129 GSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEG 188
Query: 121 IKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGR 180
K+ ++W+SM+ G++Q G+ +A+ FRD+ R+G Q N++ SV +AC+S+ G
Sbjct: 189 EKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREG-NQSNQYTFPSVLTACASVSACRVGV 247
Query: 181 QIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSG 240
Q+H K G N++ +L DMYAKC + SA+ +E D+VSWN++I G
Sbjct: 248 QVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQG 307
Query: 241 DANEAISIFRQMMHIGLIPDSITFLSLL-CACTSPMALNQGMQIHSYIVKVGFNKEVALY 299
EA+S+F +M + D T S+L C S + H IVK G+ +
Sbjct: 308 LIGEALSMFGRMHERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLVN 367
Query: 300 NSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSEN 359
N+L+ MY K + AL VFE + + +++SW A+++ + E +LF M
Sbjct: 368 NALVDMYAKRGIMDSALKVFEGMIEK-DVISWTALVTGNTHNGSYDEALKLFCNMRVGGI 426
Query: 360 KPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQR 419
P+ I ++L AEL LE G QVH +KSG +SV+N L+ MY KCGS+ A
Sbjct: 427 TPDKIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANV 486
Query: 420 VFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGL 479
+F+S E ++I+W+ LIVGYA +GL
Sbjct: 487 IFNSMEIRDLITWTCLIVGYAKNGL----------------------------------- 511
Query: 480 VEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTLL 539
+E+ +++M GI P EH++CM+DL R+G + E + + +PD T WK +L
Sbjct: 512 LEDAQRYFDSMRTVYGITPGPEHYACMIDLFGRSGDFVKVEQLLHQMEVEPDATVWKAIL 571
Query: 540 SSCKTHGNVDIAERAAENILKLDPSNSAALVLLSSIHASAGNWEDVAKLRKVL 592
++ + HGN++ ERAA+ +++L+P+N+ V LS+++++AG ++ A +R+++
Sbjct: 572 AASRKHGNIENGERAAKTLMELEPNNAVPYVQLSNMYSAAGRQDEAANVRRLM 624
Score = 233 bits (595), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 149/462 (32%), Positives = 248/462 (53%), Gaps = 12/462 (2%)
Query: 97 NGLISMYTNFGQVAHASDVFTMISIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVY 156
N +I Y+N +++ A +F +K+ ISW+++I G+ + G ++EA LF +M G+
Sbjct: 63 NTMIVAYSNSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGI- 121
Query: 157 QPNEFVLGSVFSACSSLLEPEYGRQIHG--ICAKFGLVRNVFSGCSLCDMYAKCGFLPSA 214
+PNE+ LGSV C+SL+ G QIHG I F L NV +G L MYA+C + A
Sbjct: 122 KPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNG--LLAMYAQCKRISEA 179
Query: 215 KTAFYQIE-SPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTS 273
+ F +E + V+W +++ ++ +G A +AI FR + G + TF S+L AC S
Sbjct: 180 EYLFETMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACAS 239
Query: 274 PMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNA 333
A G+Q+H IVK GF + + ++L+ MY KC + A ++ E + + ++VSWN+
Sbjct: 240 VSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVD-DVVSWNS 298
Query: 334 ILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLE--VGNQVHCFSVK 391
++ C++ GE +F +M + K + TI ++L C L+ E + + HC VK
Sbjct: 299 MIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSIL-NCFALSRTEMKIASSAHCLIVK 357
Query: 392 SGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNL 451
+G V+N L+DMYAK G + A +VF+ +VISW++L+ G +G EAL L
Sbjct: 358 TGYATYKLVNNALVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKL 417
Query: 452 FRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLA 511
F MR G+ P+++ VLSA + + L+E G ++ + G P + + +V +
Sbjct: 418 FCNMRVGGITPDKIVTASVLSASAELTLLEFGQQVHGNYIKS-GFPSSLSVNNSLVTMYT 476
Query: 512 RAGCLYEAETFIRKTGFDPDITTWKTLLSSCKTHGNVDIAER 553
+ G L +A D+ TW L+ +G ++ A+R
Sbjct: 477 KCGSLEDANVIFNSMEIR-DLITWTCLIVGYAKNGLLEDAQR 517
Score = 178 bits (452), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 108/371 (29%), Positives = 191/371 (51%), Gaps = 25/371 (6%)
Query: 193 RNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQM 252
R+ F+ ++ Y+ L A+ F + +SWNA+I+ + SG EA ++F +M
Sbjct: 57 RDEFTWNTMIVAYSNSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEM 116
Query: 253 MHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNL 312
G+ P+ T S+L CTS + L +G QIH + +K GF+ +V + N LL MY +C +
Sbjct: 117 QSDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRI 176
Query: 313 HDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGT 372
+A +FE + N V+W ++L+ Q+ A + F+ + N+ N T ++L
Sbjct: 177 SEAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTA 236
Query: 373 CAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISW 432
CA +++ VG QVHC VKSG ++ V + LIDMYAKC + A+ + + E +V+SW
Sbjct: 237 CASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSW 296
Query: 433 SSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVL------------SACSHIGLV 480
+S+IVG GL EAL++F +M ++ ++ T +L ++ +H +V
Sbjct: 297 NSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIV 356
Query: 481 EEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTLLS 540
+ G+ Y + L VD+ A+ G + ++ + + + D+ +W L++
Sbjct: 357 KTGYATYKLVNNAL------------VDMYAKRGIM-DSALKVFEGMIEKDVISWTALVT 403
Query: 541 SCKTHGNVDIA 551
+G+ D A
Sbjct: 404 GNTHNGSYDEA 414
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 105/361 (29%), Positives = 173/361 (47%), Gaps = 15/361 (4%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
MY KC M+ AR + + M + +VVSW SMI G + G EA+ M+ +M D T
Sbjct: 271 MYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFT 330
Query: 61 FGSIIKACCIA-GDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMI 119
SI+ ++ ++ + H ++K+G+ + + N L+ MY G + A VF +
Sbjct: 331 IPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSALKVFEGM 390
Query: 120 SIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYG 179
KD+ISW++++ G T G EAL LF +M R G P++ V SV SA + L E+G
Sbjct: 391 IEKDVISWTALVTGNTHNGSYDEALKLFCNM-RVGGITPDKIVTASVLSASAELTLLEFG 449
Query: 180 RQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADS 239
+Q+HG K G ++ SL MY KCG L A F +E DL++W +I +A +
Sbjct: 450 QQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIRDLITWTCLIVGYAKN 509
Query: 240 GDANEAISIFRQMMHI-GLIPDSITFLSLLCACTSPMALNQG--MQIHSYIVKVGFNKEV 296
G +A F M + G+ P + AC + G +++ + ++ +
Sbjct: 510 GLLEDAQRYFDSMRTVYGITPGPEHY-----ACMIDLFGRSGDFVKVEQLLHQMEVEPDA 564
Query: 297 ALYNSLLTMYTKCSNLHD----ALSVFEAISKNA-NLVSWNAILSACLQHKQAGETFRLF 351
++ ++L K N+ + A ++ E NA V + + SA + +A RL
Sbjct: 565 TVWKAILAASRKHGNIENGERAAKTLMELEPNNAVPYVQLSNMYSAAGRQDEAANVRRLM 624
Query: 352 K 352
K
Sbjct: 625 K 625
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 349 bits (895), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 201/594 (33%), Positives = 327/594 (55%), Gaps = 12/594 (2%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMY-IQMLRSGFFPDQL 59
+Y G++ AR FD + R+V +W MISGY + G +E + + + ML SG PD
Sbjct: 95 LYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYR 154
Query: 60 TFGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMI 119
TF S++KAC D G ++H +K GF + LI +Y+ + V +A +F +
Sbjct: 155 TFPSVLKACRTVID---GNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEM 211
Query: 120 SIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYG 179
++D+ SW++MI G+ Q G EAL L G+ + + S+ SAC+ + G
Sbjct: 212 PVRDMGSWNAMISGYCQSGNAKEAL-----TLSNGLRAMDSVTVVSLLSACTEAGDFNRG 266
Query: 180 RQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADS 239
IH K GL +F L D+YA+ G L + F ++ DL+SWN+II A+ +
Sbjct: 267 VTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELN 326
Query: 240 GDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVG-FNKEVAL 298
AIS+F++M + PD +T +SL + + + + ++ G F +++ +
Sbjct: 327 EQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITI 386
Query: 299 YNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFS- 357
N+++ MY K + A +VF + N +++SWN I+S Q+ A E ++ M
Sbjct: 387 GNAVVVMYAKLGLVDSARAVFNWLP-NTDVISWNTIISGYAQNGFASEAIEMYNIMEEEG 445
Query: 358 ENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHA 417
E N T ++L C++ +L G ++H +K+GL LDV V L DMY KCG + A
Sbjct: 446 EIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDA 505
Query: 418 QRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHI 477
+F N + W++LI + G G +A+ LF++M + GV+P+ +T+V +LSACSH
Sbjct: 506 LSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHS 565
Query: 478 GLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKT 537
GLV+EG + M+ + GI P+ +H+ CMVD+ RAG L A FI+ PD + W
Sbjct: 566 GLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGA 625
Query: 538 LLSSCKTHGNVDIAERAAENILKLDPSNSAALVLLSSIHASAGNWEDVAKLRKV 591
LLS+C+ HGNVD+ + A+E++ +++P + VLLS+++ASAG WE V ++R +
Sbjct: 626 LLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSI 679
Score = 145 bits (366), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 107/394 (27%), Positives = 197/394 (50%), Gaps = 35/394 (8%)
Query: 165 SVFSACSSLLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESP 224
++F C++L + + +H ++NV L ++Y G + A+ F I++
Sbjct: 59 TLFRYCTNL---QSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNR 115
Query: 225 DLVSWNAIIAAFADSGDANEAISIFRQ-MMHIGLIPDSITFLSLLCACTSPMALNQGMQI 283
D+ +WN +I+ + +G+++E I F M+ GL PD TF S+L AC + + G +I
Sbjct: 116 DVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVI---DGNKI 172
Query: 284 HSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQ 343
H +K GF +V + SL+ +Y++ + +A +F+ + ++ SWNA++S Q
Sbjct: 173 HCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVR-DMGSWNAMISGYCQSGN 231
Query: 344 AGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNG 403
A E L + + +T+ +LL C E G +H +S+K GL ++ VSN
Sbjct: 232 AKEALTLSNGL----RAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNK 287
Query: 404 LIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPN 463
LID+YA+ G + Q+VFD ++ISW+S+I Y ++ A++LF++MR ++P+
Sbjct: 288 LIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPD 347
Query: 464 EVTYVGVLSACSHIG-----------LVEEGWNLYNTMEEELGIPPAREHFSCMVDLLAR 512
+T + + S S +G + +GW L E++ I A +V + A+
Sbjct: 348 CLTLISLASILSQLGDIRACRSVQGFTLRKGWFL-----EDITIGNA------VVVMYAK 396
Query: 513 AGCLYEAETFIRKTGFDPDITTWKTLLSSCKTHG 546
G + A + D+ +W T++S +G
Sbjct: 397 LGLVDSARAVFNWLP-NTDVISWNTIISGYAQNG 429
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 56/113 (49%), Gaps = 4/113 (3%)
Query: 366 ITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTE 425
+ L C L S + +H V S + +V +S L+++Y G+V A+ FD +
Sbjct: 57 VHTLFRYCTNLQSAKC---LHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQ 113
Query: 426 NPNVISWSSLIVGYAMSGLGHEALNLFRK-MRNLGVRPNEVTYVGVLSACSHI 477
N +V +W+ +I GY +G E + F M + G+ P+ T+ VL AC +
Sbjct: 114 NRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTV 166
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 348 bits (892), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 188/587 (32%), Positives = 317/587 (54%), Gaps = 5/587 (0%)
Query: 6 GSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRS-GFFPDQLTFGSI 64
G++ AR +F ++ +V + ++ G+S N + ++ ++ + +S P+ T+
Sbjct: 66 GAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFA 125
Query: 65 IKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIKDL 124
I A D GR +H + G L+ + ++ MY F +V A VF + KD
Sbjct: 126 ISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDT 185
Query: 125 ISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHG 184
I W++MI G+ + +E++ +FRD++ + + + L + A + L E G QIH
Sbjct: 186 ILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHS 245
Query: 185 ICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANE 244
+ K G + + +Y+KCG + F + PD+V++NA+I + +G+
Sbjct: 246 LATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETEL 305
Query: 245 AISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLT 304
++S+F+++M G S T +SL+ M + IH Y +K F ++ +L T
Sbjct: 306 SLSLFKELMLSGARLRSSTLVSLVPVSGHLMLI---YAIHGYCLKSNFLSHASVSTALTT 362
Query: 305 MYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMI 364
+Y+K + + A +F+ S +L SWNA++S Q+ + LF++M SE PN +
Sbjct: 363 VYSKLNEIESARKLFDE-SPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPV 421
Query: 365 TITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDST 424
TIT +L CA+L +L +G VH + + VS LI MYAKCGS+ A+R+FD
Sbjct: 422 TITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLM 481
Query: 425 ENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGW 484
N ++W+++I GY + G G EALN+F +M N G+ P VT++ VL ACSH GLV+EG
Sbjct: 482 TKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGD 541
Query: 485 NLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTLLSSCKT 544
++N+M G P+ +H++CMVD+L RAG L A FI +P + W+TLL +C+
Sbjct: 542 EIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRI 601
Query: 545 HGNVDIAERAAENILKLDPSNSAALVLLSSIHASAGNWEDVAKLRKV 591
H + ++A +E + +LDP N VLLS+IH++ N+ A +R+
Sbjct: 602 HKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQT 648
Score = 182 bits (461), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 130/480 (27%), Positives = 229/480 (47%), Gaps = 20/480 (4%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQML-RSGFFPDQL 59
MY K ++DAR+VFD M ++ + W +MISGY +N E++ ++ ++ S D
Sbjct: 163 MYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTT 222
Query: 60 TFGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMI 119
T I+ A ++ LG Q+H+ K+G H G IS+Y+ G++ S +F
Sbjct: 223 TLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREF 282
Query: 120 SIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYG 179
D++++++MI G+T G +L LF++++ G + ++ V S L Y
Sbjct: 283 RKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLV--PVSGHLMLIYA 340
Query: 180 RQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADS 239
IHG C K + + +L +Y+K + SA+ F + L SWNA+I+ + +
Sbjct: 341 --IHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQN 398
Query: 240 GDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALY 299
G +AIS+FR+M P+ +T +L AC AL+ G +H + F + +
Sbjct: 399 GLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVS 458
Query: 300 NSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSEN 359
+L+ MY KC ++ +A +F+ ++K N V+WN ++S H Q E +F +ML S
Sbjct: 459 TALIGMYAKCGSIAEARRLFDLMTKK-NEVTWNTMISGYGLHGQGQEALNIFYEMLNSGI 517
Query: 360 KPNMITITNLLGTCAELASLEVGNQVHCFSV-KSGLVLDVSVSNGLIDMYAKCGSVIHAQ 418
P +T +L C+ ++ G+++ + + G V ++D+ + G H Q
Sbjct: 518 TPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAG---HLQ 574
Query: 419 RVFDSTE----NPNVISWSSLIVGYAMSGLGHEALNLFRKMRN--LGVRPNEVTYVGVLS 472
R E P W +L+ + H+ NL R + + P+ V Y +LS
Sbjct: 575 RALQFIEAMSIEPGSSVWETLLGACRI----HKDTNLARTVSEKLFELDPDNVGYHVLLS 630
Score = 177 bits (450), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 119/473 (25%), Positives = 223/473 (47%), Gaps = 13/473 (2%)
Query: 79 QLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIKDLISWSSMIRGFTQLG 138
Q HA +I GF + L ++ G + +A D+F + D+ ++ ++RGF+
Sbjct: 38 QTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNE 97
Query: 139 YEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFSG 198
+L +F + + +PN SA S + GR IHG G + G
Sbjct: 98 SPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLG 157
Query: 199 CSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLI 258
++ MY K + A+ F ++ D + WN +I+ + + E+I +FR +++
Sbjct: 158 SNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCT 217
Query: 259 P-DSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALS 317
D+ T L +L A L GMQIHS K G + +++Y+KC + +
Sbjct: 218 RLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSA 277
Query: 318 VFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELA 377
+F K ++V++NA++ + + + LFK+++ S + T+ +L+ L
Sbjct: 278 LFREFRK-PDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLM 336
Query: 378 SLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIV 437
+ +H + +KS + SVS L +Y+K + A+++FD + ++ SW+++I
Sbjct: 337 LIYA---IHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMIS 393
Query: 438 GYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEG-W--NLYNTMEEEL 494
GY +GL +A++LFR+M+ PN VT +LSAC+ +G + G W +L + + E
Sbjct: 394 GYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFES 453
Query: 495 GIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTLLSSCKTHGN 547
I + + ++ + A+ G + EA ++ TW T++S HG
Sbjct: 454 SIYVS----TALIGMYAKCGSIAEARRLFDLMTKKNEV-TWNTMISGYGLHGQ 501
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 347 bits (891), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 196/593 (33%), Positives = 337/593 (56%), Gaps = 6/593 (1%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
MYG+ G++ DA +VFD M +R++V+W++++S +NG+ +A+ M+ M+ G PD +T
Sbjct: 145 MYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVT 204
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMIS 120
S+++ C G + + R +H + + F N L++MY+ G + + +F I+
Sbjct: 205 MISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIA 264
Query: 121 IKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGR 180
K+ +SW++MI + + + +AL F +M++ G+ +PN L SV S+C + G+
Sbjct: 265 KKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGI-EPNLVTLYSVLSSCGLIGLIREGK 323
Query: 181 QIHGICAKFGLVRNVFS-GCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADS 239
+HG + L N S +L ++YA+CG L +T + ++V+WN++I+ +A
Sbjct: 324 SVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHR 383
Query: 240 GDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALY 299
G +A+ +FRQM+ + PD+ T S + AC + + G QIH ++++ + E +
Sbjct: 384 GMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVSDEF-VQ 442
Query: 300 NSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSEN 359
NSL+ MY+K ++ A +VF I K+ ++V+WN++L Q+ + E LF M S
Sbjct: 443 NSLIDMYSKSGSVDSASTVFNQI-KHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYL 501
Query: 360 KPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQR 419
+ N +T ++ C+ + SLE G VH + SGL D+ LIDMYAKCG + A+
Sbjct: 502 EMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGLK-DLFTDTALIDMYAKCGDLNAAET 560
Query: 420 VFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGL 479
VF + + +++SWSS+I Y M G A++ F +M G +PNEV ++ VLSAC H G
Sbjct: 561 VFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGS 620
Query: 480 VEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTLL 539
VEEG +N M + G+ P EHF+C +DLL+R+G L EA I++ F D + W +L+
Sbjct: 621 VEEGKYYFNLM-KSFGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLV 679
Query: 540 SSCKTHGNVDIAERAAENILKLDPSNSAALVLLSSIHASAGNWEDVAKLRKVL 592
+ C+ H +DI + ++ + ++ LLS+I+A G WE+ +LR +
Sbjct: 680 NGCRIHQKMDIIKAIKNDLSDIVTDDTGYYTLLSNIYAEEGEWEEFRRLRSAM 732
Score = 232 bits (592), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 150/530 (28%), Positives = 280/530 (52%), Gaps = 17/530 (3%)
Query: 2 YGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTF 61
Y GS +R VF+A + + +I + A+ +Y +++ + F
Sbjct: 44 YAFMGSPDSSRLVFEAFPYPDSFMYGVLIKCNVWCHLLDAAIDLYHRLVSETTQISKFVF 103
Query: 62 GSIIKACCIAGD-IYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMIS 120
S+++AC + + + +G ++H +IK G V + L+ MY G ++ A VF +
Sbjct: 104 PSVLRACAGSREHLSVGGKVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMP 163
Query: 121 IKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGR 180
++DL++WS+++ + G ++AL +F+ M+ GV +P+ + SV C+ L R
Sbjct: 164 VRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGV-EPDAVTMISVVEGCAELGCLRIAR 222
Query: 181 QIHGICAK--FGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFAD 238
+HG + F L + + SL MY+KCG L S++ F +I + VSW A+I+++
Sbjct: 223 SVHGQITRKMFDLDETLCN--SLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNR 280
Query: 239 SGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEV-A 297
+ +A+ F +M+ G+ P+ +T S+L +C + +G +H + V+ + +
Sbjct: 281 GEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYES 340
Query: 298 LYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFS 357
L +L+ +Y +C L D +V +S + N+V+WN+++S + LF+QM+
Sbjct: 341 LSLALVELYAECGKLSDCETVLRVVS-DRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQ 399
Query: 358 ENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHA 417
KP+ T+ + + C + +G Q+H +++ V D V N LIDMY+K GSV A
Sbjct: 400 RIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTD-VSDEFVQNSLIDMYSKSGSVDSA 458
Query: 418 QRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHI 477
VF+ ++ +V++W+S++ G++ +G EA++LF M + + NEVT++ V+ ACS I
Sbjct: 459 STVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSI 518
Query: 478 GLVEEG-WNLYNTMEEELGIPPAREHF--SCMVDLLARAGCLYEAETFIR 524
G +E+G W + +L I ++ F + ++D+ A+ G L AET R
Sbjct: 519 GSLEKGKW-----VHHKLIISGLKDLFTDTALIDMYAKCGDLNAAETVFR 563
Score = 171 bits (434), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 115/379 (30%), Positives = 192/379 (50%), Gaps = 11/379 (2%)
Query: 166 VFSACSSLLEPEYGRQIHGICAKFG-LVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESP 224
+F +CSSL Q+H G L R+ L + YA G S++ F P
Sbjct: 7 LFRSCSSL---RLVSQLHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAFPYP 63
Query: 225 DLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACT-SPMALNQGMQI 283
D + +I + AI ++ +++ F S+L AC S L+ G ++
Sbjct: 64 DSFMYGVLIKCNVWCHLLDAAIDLYHRLVSETTQISKFVFPSVLRACAGSREHLSVGGKV 123
Query: 284 HSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQ 343
H I+K G + + + SLL MY + NL DA VF+ + +LV+W+ ++S+CL++ +
Sbjct: 124 HGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVR-DLVAWSTLVSSCLENGE 182
Query: 344 AGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNG 403
+ R+FK M+ +P+ +T+ +++ CAEL L + VH + LD ++ N
Sbjct: 183 VVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNS 242
Query: 404 LIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPN 463
L+ MY+KCG ++ ++R+F+ N +SW+++I Y +AL F +M G+ PN
Sbjct: 243 LLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPN 302
Query: 464 EVTYVGVLSACSHIGLVEEGWNLYN-TMEEELGIPPAREHFS-CMVDLLARAGCLYEAET 521
VT VLS+C IGL+ EG +++ + EL P E S +V+L A G L + ET
Sbjct: 303 LVTLYSVLSSCGLIGLIREGKSVHGFAVRREL--DPNYESLSLALVELYAECGKLSDCET 360
Query: 522 FIRKTGFDPDITTWKTLLS 540
+R D +I W +L+S
Sbjct: 361 VLRVVS-DRNIVAWNSLIS 378
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 347 bits (890), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 183/549 (33%), Positives = 317/549 (57%), Gaps = 39/549 (7%)
Query: 77 GRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIKDLISWSSMIRGFTQ 136
+QLHA I++ H A + +IS+YTN + A +F + +++W S+IR FT
Sbjct: 24 AKQLHAQFIRTQSLSHTSA-SIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTD 82
Query: 137 LGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVF 196
+AL F +M G P+ V SV +C+ +++ +G +HG + G+ +++
Sbjct: 83 QSLFSKALASFVEMRASG-RCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLY 141
Query: 197 SGCSLCDMYAK--------------------------------CGFLP----SAKTAFYQ 220
+G +L +MYAK +P S + F
Sbjct: 142 TGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEV 201
Query: 221 IESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQG 280
+ D+VS+N IIA +A SG +A+ + R+M L PDS T S+L + + + +G
Sbjct: 202 MPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKG 261
Query: 281 MQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQ 340
+IH Y+++ G + +V + +SL+ MY K + + D+ VF + + +SWN++++ +Q
Sbjct: 262 KEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCR-DGISWNSLVAGYVQ 320
Query: 341 HKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSV 400
+ + E RLF+QM+ ++ KP + ++++ CA LA+L +G Q+H + ++ G ++ +
Sbjct: 321 NGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFI 380
Query: 401 SNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGV 460
++ L+DMY+KCG++ A+++FD + +SW+++I+G+A+ G GHEA++LF +M+ GV
Sbjct: 381 ASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGV 440
Query: 461 RPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAE 520
+PN+V +V VL+ACSH+GLV+E W +N+M + G+ EH++ + DLL RAG L EA
Sbjct: 441 KPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAY 500
Query: 521 TFIRKTGFDPDITTWKTLLSSCKTHGNVDIAERAAENILKLDPSNSAALVLLSSIHASAG 580
FI K +P + W TLLSSC H N+++AE+ AE I +D N A VL+ +++AS G
Sbjct: 501 NFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNG 560
Query: 581 NWEDVAKLR 589
W+++AKLR
Sbjct: 561 RWKEMAKLR 569
Score = 193 bits (490), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 106/353 (30%), Positives = 187/353 (52%), Gaps = 3/353 (0%)
Query: 12 RQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTFGSIIKACCIA 71
R+VF+ M ++VVS+ ++I+GY+Q+G +A+ M +M + PD T S++
Sbjct: 196 RRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEY 255
Query: 72 GDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIKDLISWSSMI 131
D+ G+++H +VI+ G + + L+ MY ++ + VF+ + +D ISW+S++
Sbjct: 256 VDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLV 315
Query: 132 RGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGL 191
G+ Q G EAL LFR M+ V +P SV AC+ L G+Q+HG + G
Sbjct: 316 AGYVQNGRYNEALRLFRQMVTAKV-KPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGF 374
Query: 192 VRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQ 251
N+F +L DMY+KCG + +A+ F ++ D VSW AII A G +EA+S+F +
Sbjct: 375 GSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEE 434
Query: 252 MMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKV-GFNKEVALYNSLLTMYTKCS 310
M G+ P+ + F+++L AC+ +++ + + KV G N+E+ Y ++ + +
Sbjct: 435 MKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAG 494
Query: 311 NLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNM 363
L +A + + W+ +LS+C HK E + +F+ + NM
Sbjct: 495 KLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNL-ELAEKVAEKIFTVDSENM 546
Score = 189 bits (481), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 107/399 (26%), Positives = 200/399 (50%), Gaps = 38/399 (9%)
Query: 15 FDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTFGSIIKACCIAGDI 74
F + V++W S+I ++ ++A+ +++M SG PD F S++K+C + D+
Sbjct: 62 FKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDL 121
Query: 75 YLGRQLHAHVIKSGFGGHLVAQNGLISMYTNF-----------------GQVAHASD--- 114
G +H +++ G L N L++MY + +++ D
Sbjct: 122 RFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDV 181
Query: 115 ----------------VFTMISIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQP 158
VF ++ KD++S++++I G+ Q G +AL + R+M + +P
Sbjct: 182 KAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDL-KP 240
Query: 159 NEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAF 218
+ F L SV S ++ G++IHG + G+ +V+ G SL DMYAK + ++ F
Sbjct: 241 DSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVF 300
Query: 219 YQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALN 278
++ D +SWN+++A + +G NEA+ +FRQM+ + P ++ F S++ AC L+
Sbjct: 301 SRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLH 360
Query: 279 QGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSAC 338
G Q+H Y+++ GF + + ++L+ MY+KC N+ A +F+ ++ + VSW AI+
Sbjct: 361 LGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNV-LDEVSWTAIIMGH 419
Query: 339 LQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELA 377
H E LF++M KPN + +L C+ +
Sbjct: 420 ALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVG 458
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 128/216 (59%), Gaps = 4/216 (1%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
MY K ++D+ +VF ++ R+ +SW S+++GY QNG+ NEA+ ++ QM+ + P +
Sbjct: 286 MYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVA 345
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMIS 120
F S+I AC ++LG+QLH +V++ GFG ++ + L+ MY+ G + A +F ++
Sbjct: 346 FSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMN 405
Query: 121 IKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACS--SLLEPEY 178
+ D +SW+++I G G+ EA+ LF +M RQGV +PN+ +V +ACS L++ +
Sbjct: 406 VLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGV-KPNQVAFVAVLTACSHVGLVDEAW 464
Query: 179 GRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSA 214
G + + +GL + + ++ D+ + G L A
Sbjct: 465 G-YFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEA 499
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 347 bits (890), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 191/589 (32%), Positives = 310/589 (52%), Gaps = 4/589 (0%)
Query: 4 KCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTFGS 63
K S DARQ+F M R++ W +++ S+ Q E + + M R PD T
Sbjct: 6 KFSSSVDARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPV 65
Query: 64 IIKACCIAGDIYLGRQLHAHVIKS-GFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIK 122
+KAC ++ G +H V K G L + LI MY G++ A +F +
Sbjct: 66 ALKACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKP 125
Query: 123 DLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQI 182
D+++WSSM+ GF + G +A+ FR M+ P+ L ++ SAC+ L GR +
Sbjct: 126 DIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCV 185
Query: 183 HGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDA 242
HG + G ++ SL + YAK A F I D++SW+ +IA + +G A
Sbjct: 186 HGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAA 245
Query: 243 NEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSL 302
EA+ +F MM G P+ T L +L AC + L QG + H ++ G EV + +L
Sbjct: 246 AEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTAL 305
Query: 303 LTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSEN-KP 361
+ MY KC + +A +VF I + ++VSW A++S + A + F ML N +P
Sbjct: 306 VDMYMKCFSPEEAYAVFSRIPRK-DVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRP 364
Query: 362 NMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVF 421
+ I + +LG+C+EL LE H + +K G + + L+++Y++CGS+ +A +VF
Sbjct: 365 DAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVF 424
Query: 422 DSTENPNVISWSSLIVGYAMSGLGHEALNLFRKM-RNLGVRPNEVTYVGVLSACSHIGLV 480
+ + + W+SLI GY + G G +AL F M ++ V+PNEVT++ +LSACSH GL+
Sbjct: 425 NGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLI 484
Query: 481 EEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTLLS 540
EG ++ M + + P EH++ +VDLL R G L A ++ F P TLL
Sbjct: 485 HEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLG 544
Query: 541 SCKTHGNVDIAERAAENILKLDPSNSAALVLLSSIHASAGNWEDVAKLR 589
+C+ H N ++AE A+ + +L+ +++ +L+S+++ G WE+V KLR
Sbjct: 545 ACRIHQNGEMAETVAKKLFELESNHAGYYMLMSNVYGVKGEWENVEKLR 593
Score = 217 bits (552), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 127/388 (32%), Positives = 209/388 (53%), Gaps = 5/388 (1%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQM-LRSGFFPDQL 59
MY KCG M +A ++FD + ++V+W+SM+SG+ +NG +AV + +M + S PD++
Sbjct: 105 MYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRV 164
Query: 60 TFGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMI 119
T +++ AC + LGR +H VI+ GF L N L++ Y A ++F MI
Sbjct: 165 TLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMI 224
Query: 120 SIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYG 179
+ KD+ISWS++I + Q G EAL +F DM+ G +PN + V AC++ + E G
Sbjct: 225 AEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGT-EPNVATVLCVLQACAAAHDLEQG 283
Query: 180 RQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADS 239
R+ H + + GL V +L DMY KC A F +I D+VSW A+I+ F +
Sbjct: 284 RKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLN 343
Query: 240 GDANEAISIFRQM-MHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVAL 298
G A+ +I F M + PD+I + +L +C+ L Q HSY++K GF+ +
Sbjct: 344 GMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFI 403
Query: 299 YNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQML-FS 357
SL+ +Y++C +L +A VF I+ +V W ++++ H + + F M+ S
Sbjct: 404 GASLVELYSRCGSLGNASKVFNGIALKDTVV-WTSLITGYGIHGKGTKALETFNHMVKSS 462
Query: 358 ENKPNMITITNLLGTCAELASLEVGNQV 385
E KPN +T ++L C+ + G ++
Sbjct: 463 EVKPNEVTFLSILSACSHAGLIHEGLRI 490
Score = 170 bits (430), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 110/399 (27%), Positives = 193/399 (48%), Gaps = 7/399 (1%)
Query: 2 YGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTF 61
Y K + K+A +F + ++V+SW+++I+ Y QNG EA++++ M+ G P+ T
Sbjct: 208 YAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATV 267
Query: 62 GSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISI 121
+++AC A D+ GR+ H I+ G + L+ MY A VF+ I
Sbjct: 268 LCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPR 327
Query: 122 KDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQ 181
KD++SW ++I GFT G ++ F ML + +P+ ++ V +CS L E +
Sbjct: 328 KDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKC 387
Query: 182 IHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGD 241
H K+G N F G SL ++Y++CG L +A F I D V W ++I + G
Sbjct: 388 FHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGK 447
Query: 242 ANEAISIFRQMMHIGLI-PDSITFLSLLCACTSPMALNQGMQIHSYIVK-VGFNKEVALY 299
+A+ F M+ + P+ +TFLS+L AC+ +++G++I +V + Y
Sbjct: 448 GTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHY 507
Query: 300 NSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLF--- 356
L+ + + +L A+ + + + + +L AC H Q GE + LF
Sbjct: 508 AVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGACRIH-QNGEMAETVAKKLFELE 566
Query: 357 SENKPNMITITNLLGTCAELASLE-VGNQVHCFSVKSGL 394
S + + ++N+ G E ++E + N V +K GL
Sbjct: 567 SNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRGIKKGL 605
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 346 bits (887), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 194/591 (32%), Positives = 328/591 (55%), Gaps = 5/591 (0%)
Query: 1 MYGKCGSMKDARQVFDAMHLR-NVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQL 59
MY K + AR++FD + + V W S++S YS +G+ E + ++ +M +G P+
Sbjct: 226 MYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSY 285
Query: 60 TFGSIIKACCIAGDIYLGRQLHAHVIKSG-FGGHLVAQNGLISMYTNFGQVAHASDVFTM 118
T S + AC LG+++HA V+KS L N LI+MYT G++ A +
Sbjct: 286 TIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQ 345
Query: 119 ISIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEY 178
++ D+++W+S+I+G+ Q EAL F DM+ G ++ +E + S+ +A L
Sbjct: 346 MNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAG-HKSDEVSMTSIIAASGRLSNLLA 404
Query: 179 GRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFAD 238
G ++H K G N+ G +L DMY+KC AF ++ DL+SW +IA +A
Sbjct: 405 GMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQ 464
Query: 239 SGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVAL 298
+ EA+ +FR + + D + S+L A + ++ +IH +I++ G V +
Sbjct: 465 NDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLDTV-I 523
Query: 299 YNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSE 358
N L+ +Y KC N+ A VFE+I K ++VSW +++S+ + E LF++M+ +
Sbjct: 524 QNELVDVYGKCRNMGYATRVFESI-KGKDVVSWTSMISSSALNGNESEAVELFRRMVETG 582
Query: 359 NKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQ 418
+ + + +L A L++L G ++HC+ ++ G L+ S++ ++DMYA CG + A+
Sbjct: 583 LSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAK 642
Query: 419 RVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIG 478
VFD E ++ ++S+I Y M G G A+ LF KMR+ V P+ ++++ +L ACSH G
Sbjct: 643 AVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAG 702
Query: 479 LVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTL 538
L++EG ME E + P EH+ C+VD+L RA C+ EA F++ +P W L
Sbjct: 703 LLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCAL 762
Query: 539 LSSCKTHGNVDIAERAAENILKLDPSNSAALVLLSSIHASAGNWEDVAKLR 589
L++C++H +I E AA+ +L+L+P N LVL+S++ A G W DV K+R
Sbjct: 763 LAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVR 813
Score = 251 bits (640), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 142/467 (30%), Positives = 248/467 (53%), Gaps = 5/467 (1%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
MYGKCGS+ DA +VFD M R +W +MI Y NG+ A+ +Y M G +
Sbjct: 125 MYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSS 184
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMIS 120
F +++KAC DI G +LH+ ++K G+ N L+SMY ++ A +F
Sbjct: 185 FPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQ 244
Query: 121 IK-DLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYG 179
K D + W+S++ ++ G +E L LFR+M G PN + + S +AC + G
Sbjct: 245 EKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGP-APNSYTIVSALTACDGFSYAKLG 303
Query: 180 RQIHGICAKFGLVRNVFSGC-SLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFAD 238
++IH K + C +L MY +CG +P A+ Q+ + D+V+WN++I +
Sbjct: 304 KEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQ 363
Query: 239 SGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVAL 298
+ EA+ F M+ G D ++ S++ A L GM++H+Y++K G++ + +
Sbjct: 364 NLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQV 423
Query: 299 YNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSE 358
N+L+ MY+KC NL + + +L+SW +++ Q+ E LF+ +
Sbjct: 424 GNTLIDMYSKC-NLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKR 482
Query: 359 NKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQ 418
+ + + + ++L + L S+ + ++HC ++ GL LD + N L+D+Y KC ++ +A
Sbjct: 483 MEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGL-LDTVIQNELVDVYGKCRNMGYAT 541
Query: 419 RVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEV 465
RVF+S + +V+SW+S+I A++G EA+ LFR+M G+ + V
Sbjct: 542 RVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSV 588
Score = 195 bits (496), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 144/527 (27%), Positives = 255/527 (48%), Gaps = 48/527 (9%)
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNG-LISMYTNFGQVAHASDVFTMI 119
F +++ C + GRQLH+ + K+ L G L+ MY G + A VF +
Sbjct: 83 FAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEM 142
Query: 120 SIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLG-----SVFSACSSLL 174
+ +W++MI + G AL L+ +M +GV LG ++ AC+ L
Sbjct: 143 PDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGV------PLGLSSFPALLKACAKLR 196
Query: 175 EPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAF--YQIESPDLVSWNAI 232
+ G ++H + K G F +L MYAK L +A+ F +Q E D V WN+I
Sbjct: 197 DIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQ-EKGDAVLWNSI 255
Query: 233 IAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVG- 291
+++++ SG + E + +FR+M G P+S T +S L AC G +IH+ ++K
Sbjct: 256 LSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSST 315
Query: 292 FNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLF 351
+ E+ + N+L+ MYT+C + A + ++ NA++V+WN+++ +Q+ E F
Sbjct: 316 HSSELYVCNALIAMYTRCGKMPQAERILRQMN-NADVVTWNSLIKGYVQNLMYKEALEFF 374
Query: 352 KQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKC 411
M+ + +K + +++T+++ L++L G ++H + +K G ++ V N LIDMY+KC
Sbjct: 375 SDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKC 434
Query: 412 GSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVL 471
+ R F + ++ISW+++I GYA + EAL LFR + + +E+ +L
Sbjct: 435 NLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSIL 494
Query: 472 SACS-----------HIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCL-YEA 519
A S H ++ +G L ++ EL VD+ + + Y
Sbjct: 495 RASSVLKSMLIVKEIHCHILRKGL-LDTVIQNEL------------VDVYGKCRNMGYAT 541
Query: 520 ETFIRKTGFDPDITTWKTLLSSCKTHGN----VDIAERAAENILKLD 562
F G D+ +W +++SS +GN V++ R E L D
Sbjct: 542 RVFESIKG--KDVVSWTSMISSSALNGNESEAVELFRRMVETGLSAD 586
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 90/199 (45%), Gaps = 4/199 (2%)
Query: 351 FKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHC--FSVKSGLVLDVSVSNGLIDMY 408
F+++ SEN + +L C + ++ G Q+H F LD ++ L+ MY
Sbjct: 68 FQRLDVSENNSPVEAFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDF-LAGKLVFMY 126
Query: 409 AKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYV 468
KCGS+ A++VFD + +W+++I Y +G AL L+ MR GV ++
Sbjct: 127 GKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFP 186
Query: 469 GVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGF 528
+L AC+ + + G L++ + +LG + +V + A+ L A
Sbjct: 187 ALLKACAKLRDIRSGSELHSLL-VKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQE 245
Query: 529 DPDITTWKTLLSSCKTHGN 547
D W ++LSS T G
Sbjct: 246 KGDAVLWNSILSSYSTSGK 264
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 344 bits (882), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 189/591 (31%), Positives = 316/591 (53%), Gaps = 5/591 (0%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
MY C + A VF+ + ++ SW +M++ Y+ NG E + ++ M +++
Sbjct: 243 MYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVA 302
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMIS 120
S ++A GD+ G +H + ++ G G + L+SMY+ G++ A +F I
Sbjct: 303 AASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIE 362
Query: 121 IKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGR 180
+D++SWS+MI + Q G EA+ LFRDM+R + +PN L SV C+ + G+
Sbjct: 363 DRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHI-KPNAVTLTSVLQGCAGVAASRLGK 421
Query: 181 QIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSG 240
IH K + + + ++ MYAKCG A AF ++ D V++NA+ + G
Sbjct: 422 SIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIG 481
Query: 241 DANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYN 300
DAN+A +++ M G+ PDS T + +L C +G ++ I+K GF+ E + +
Sbjct: 482 DANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAH 541
Query: 301 SLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENK 360
+L+ M+TKC L A+ +F+ + VSWN +++ L H QA E F+QM + +
Sbjct: 542 ALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQ 601
Query: 361 PNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRV 420
PN +T N++ AEL++L VG VH ++ G V N L+DMYAKCG + +++
Sbjct: 602 PNAVTFVNIVRAAAELSALRVGMSVHSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKC 661
Query: 421 FDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLV 480
F N ++SW++++ YA GL A++LF M+ ++P+ V+++ VLSAC H GLV
Sbjct: 662 FIEISNKYIVSWNTMLSAYAAHGLASCAVSLFLSMQENELKPDSVSFLSVLSACRHAGLV 721
Query: 481 EEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTLLS 540
EEG ++ M E I EH++CMVDLL +AG EA +R+ + W LL+
Sbjct: 722 EEGKRIFEEMGERHKIEAEVEHYACMVDLLGKAGLFGEAVEMMRRMRVKTSVGVWGALLN 781
Query: 541 SCKTHGNVDIAERAAENILKLDPSNSAALVLLSSIHASAGNWEDVAKLRKV 591
S + H N+ ++ A ++KL+P N + S G +V++++KV
Sbjct: 782 SSRMHCNLWLSNAALCQLVKLEPLNPSHY----SQDRRLGEVNNVSRIKKV 828
Score = 262 bits (670), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 182/581 (31%), Positives = 300/581 (51%), Gaps = 17/581 (2%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
MY K + ARQVFD MH+++VV+W +M+SG +QNG + A++++ M D ++
Sbjct: 144 MYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVDIDHVS 203
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMIS 120
++I A + R LH VIK GF +GLI MY N + A VF +
Sbjct: 204 LYNLIPAVSKLEKSDVCRCLHGLVIKKGF--IFAFSSGLIDMYCNCADLYAAESVFEEVW 261
Query: 121 IKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGR 180
KD SW +M+ + G+ E L LF D++R + N+ S A + + + G
Sbjct: 262 RKDESSWGTMMAAYAHNGFFEEVLELF-DLMRNYDVRMNKVAAASALQAAAYVGDLVKGI 320
Query: 181 QIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSG 240
IH + GL+ +V SL MY+KCG L A+ F IE D+VSW+A+IA++ +G
Sbjct: 321 AIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAG 380
Query: 241 DANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYN 300
+EAIS+FR MM I + P+++T S+L C A G IH Y +K E+
Sbjct: 381 QHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETAT 440
Query: 301 SLLTMYTKCSNLHDALSVFEAIS-KNANLVSWNAILSACLQHKQAGETFRLFKQMLFSEN 359
++++MY KC AL FE + K+A V++NA+ Q A + F ++K M
Sbjct: 441 AVISMYAKCGRFSPALKAFERLPIKDA--VAFNALAQGYTQIGDANKAFDVYKNMKLHGV 498
Query: 360 KPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQR 419
P+ T+ +L TCA + G+ V+ +K G + V++ LI+M+ KC ++ A
Sbjct: 499 CPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAIV 558
Query: 420 VFDSTE-NPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIG 478
+FD + +SW+ ++ GY + G EA+ FR+M+ +PN VT+V ++ A + +
Sbjct: 559 LFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELS 618
Query: 479 LVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAET-FIRKTGFDPDITTWKT 537
+ G ++++++ + G + +VD+ A+ G + +E FI + + I +W T
Sbjct: 619 ALRVGMSVHSSL-IQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEIS--NKYIVSWNT 675
Query: 538 LLSSCKTHG----NVDIAERAAENILKLDPSNSAALVLLSS 574
+LS+ HG V + EN LK P + + L +LS+
Sbjct: 676 MLSAYAAHGLASCAVSLFLSMQENELK--PDSVSFLSVLSA 714
Score = 247 bits (631), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 159/570 (27%), Positives = 287/570 (50%), Gaps = 7/570 (1%)
Query: 11 ARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQM-LRSGFFPDQLTFGSIIKACC 69
+R +FD++ VV W SMI GY++ G EA+ + M G PD+ +F +KAC
Sbjct: 52 SRVIFDSVRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACA 111
Query: 70 IAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIKDLISWSS 129
+ D G ++H + + G + L+ MY + A VF + +KD+++W++
Sbjct: 112 GSMDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNT 171
Query: 130 MIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKF 189
M+ G Q G AL LF DM R + L ++ A S L + + R +HG+ K
Sbjct: 172 MVSGLAQNGCSSAALLLFHDM-RSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKK 230
Query: 190 GLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIF 249
G + SG L DMY C L +A++ F ++ D SW ++AA+A +G E + +F
Sbjct: 231 GFIFAFSSG--LIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELF 288
Query: 250 RQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKC 309
M + + + + S L A L +G+ IH Y V+ G +V++ SL++MY+KC
Sbjct: 289 DLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKC 348
Query: 310 SNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNL 369
L A +F I ++ ++VSW+A++++ Q Q E LF+ M+ KPN +T+T++
Sbjct: 349 GELEIAEQLFINI-EDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSV 407
Query: 370 LGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNV 429
L CA +A+ +G +HC+++K+ + ++ + +I MYAKCG A + F+ +
Sbjct: 408 LQGCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPIKDA 467
Query: 430 ISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNT 489
+++++L GY G ++A ++++ M+ GV P+ T VG+L C+ G +Y
Sbjct: 468 VAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQ 527
Query: 490 MEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTLLSSCKTHGNVD 549
+ + G ++++ + L A K GF+ +W +++ HG +
Sbjct: 528 IIKH-GFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAE 586
Query: 550 IAERAAENILKLDPSNSAALVLLSSIHASA 579
A A +K++ A+ ++ + A+A
Sbjct: 587 EA-VATFRQMKVEKFQPNAVTFVNIVRAAA 615
Score = 199 bits (506), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 121/409 (29%), Positives = 218/409 (53%), Gaps = 7/409 (1%)
Query: 79 QLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIKDLISWSSMIRGFTQLG 138
Q+H +I SG H N LI+ Y+ F + + +F + ++ W+SMIRG+T+ G
Sbjct: 23 QVHGSLIVSGLKPH----NQLINAYSLFQRQDLSRVIFDSVRDPGVVLWNSMIRGYTRAG 78
Query: 139 YEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFSG 198
EAL F M + P+++ AC+ ++ + G +IH + A+ GL +V+ G
Sbjct: 79 LHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKKGLRIHDLIAEMGLESDVYIG 138
Query: 199 CSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLI 258
+L +MY K L SA+ F ++ D+V+WN +++ A +G ++ A+ +F M +
Sbjct: 139 TALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVD 198
Query: 259 PDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSV 318
D ++ +L+ A + + +H ++K GF A + L+ MY C++L+ A SV
Sbjct: 199 IDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFI--FAFSSGLIDMYCNCADLYAAESV 256
Query: 319 FEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELAS 378
FE + + + SW +++A + E LF M + + N + + L A +
Sbjct: 257 FEEVWRK-DESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGD 315
Query: 379 LEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVG 438
L G +H ++V+ GL+ DVSV+ L+ MY+KCG + A+++F + E+ +V+SWS++I
Sbjct: 316 LVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIAS 375
Query: 439 YAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLY 487
Y +G EA++LFR M + ++PN VT VL C+ + G +++
Sbjct: 376 YEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIH 424
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 343 bits (881), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 206/621 (33%), Positives = 319/621 (51%), Gaps = 79/621 (12%)
Query: 52 SGFFPDQLTFGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHL------------VAQNGL 99
+G F QL +IK+ + +YL L K+G+ H + N +
Sbjct: 28 NGRFTAQLVHCRVIKSGLMFS-VYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTV 86
Query: 100 ISMYTNFGQVAHASDVFTMISIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPN 159
+S Y+ G + + F + +D +SW++MI G+ +G +A+ + DM+++G+ +P
Sbjct: 87 LSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGI-EPT 145
Query: 160 EFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAK---- 215
+F L +V ++ ++ E G+++H K GL NV SL +MYAKCG AK
Sbjct: 146 QFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFD 205
Query: 216 ---------------------------TAFYQIESPDLVSWNAIIAAFADSGDANEAISI 248
F Q+ D+V+WN++I+ F G A+ I
Sbjct: 206 RMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDI 265
Query: 249 FRQMMHIGLI-PDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYT 307
F +M+ L+ PD T S+L AC + L G QIHS+IV GF+ + N+L++MY+
Sbjct: 266 FSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYS 325
Query: 308 KCSNLHDALSVFEAIS--------------------------------KNANLVSWNAIL 335
+C + A + E K+ ++V+W A++
Sbjct: 326 RCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMI 385
Query: 336 SACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLV 395
QH GE LF+ M+ +PN T+ +L + LASL G Q+H +VKSG +
Sbjct: 386 VGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEI 445
Query: 396 LDVSVSNGLIDMYAKCGSVIHAQRVFDSTE-NPNVISWSSLIVGYAMSGLGHEALNLFRK 454
VSVSN LI MYAK G++ A R FD + +SW+S+I+ A G EAL LF
Sbjct: 446 YSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFET 505
Query: 455 MRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAG 514
M G+RP+ +TYVGV SAC+H GLV +G ++ M++ I P H++CMVDL RAG
Sbjct: 506 MLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAG 565
Query: 515 CLYEAETFIRKTGFDPDITTWKTLLSSCKTHGNVDIAERAAENILKLDPSNSAALVLLSS 574
L EA+ FI K +PD+ TW +LLS+C+ H N+D+ + AAE +L L+P NS A L++
Sbjct: 566 LLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALAN 625
Query: 575 IHASAGNWEDVAKLRKVLDDG 595
++++ G WE+ AK+RK + DG
Sbjct: 626 LYSACGKWEEAAKIRKSMKDG 646
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 108/247 (43%), Gaps = 49/247 (19%)
Query: 359 NKPNMITITNLLGTCAELASLEVGNQ--------VHCFSVKSGLVLDVSVSNGLIDMYAK 410
+ P ++++ LL C L V VHC +KSGL+ V + N L+++Y+K
Sbjct: 2 DAPVPLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSK 61
Query: 411 CGSVIHAQRVFDST-------------------------------ENPNVISWSSLIVGY 439
G +HA+++FD + +SW+++IVGY
Sbjct: 62 TGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGY 121
Query: 440 AMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPA 499
G H+A+ + M G+ P + T VL++ + +E G +++ + +LG+
Sbjct: 122 KNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFI-VKLGLRGN 180
Query: 500 REHFSCMVDLLARAGCLYEAETFIRKTGFD----PDITTWKTLLSSCKTHGNVDIAERAA 555
+ ++++ A+ G + + K FD DI++W +++ G +D+A
Sbjct: 181 VSVSNSLLNMYAKCG-----DPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQF 235
Query: 556 ENILKLD 562
E + + D
Sbjct: 236 EQMAERD 242
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 343 bits (880), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 193/536 (36%), Positives = 298/536 (55%), Gaps = 7/536 (1%)
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKS-GFGGHLVAQNGLISMYTNFGQVAHASDVFTMI 119
G ++K A + LGR +HA ++K+ N LI+MY+ A V +
Sbjct: 9 LGLLLKNAISASSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLT 68
Query: 120 SIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYG 179
++++SW+S+I G Q G+ AL F +M R+GV PN+F F A +SL P G
Sbjct: 69 PARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVV-PNDFTFPCAFKAVASLRLPVTG 127
Query: 180 RQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADS 239
+QIH + K G + +VF GCS DMY K A+ F +I +L +WNA I+
Sbjct: 128 KQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTD 187
Query: 240 GDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALY 299
G EAI F + I P+SITF + L AC+ + LN GMQ+H +++ GF+ +V++
Sbjct: 188 GRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVC 247
Query: 300 NSLLTMYTKCSNLHDALSVF-EAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSE 358
N L+ Y KC + + +F E +KNA VSW ++++A +Q+ + + L+ +
Sbjct: 248 NGLIDFYGKCKQIRSSEIIFTEMGTKNA--VSWCSLVAAYVQNHEDEKASVLYLRSRKDI 305
Query: 359 NKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQ 418
+ + I+++L CA +A LE+G +H +VK+ + + V + L+DMY KCG + ++
Sbjct: 306 VETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSE 365
Query: 419 RVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKM--RNLGVRPNEVTYVGVLSACSH 476
+ FD N+++ +SLI GYA G AL LF +M R G PN +T+V +LSACS
Sbjct: 366 QAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSR 425
Query: 477 IGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWK 536
G VE G ++++M GI P EH+SC+VD+L RAG + A FI+K P I+ W
Sbjct: 426 AGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWG 485
Query: 537 TLLSSCKTHGNVDIAERAAENILKLDPSNSAALVLLSSIHASAGNWEDVAKLRKVL 592
L ++C+ HG + AAEN+ KLDP +S VLLS+ A+AG W + +R+ L
Sbjct: 486 ALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREEL 541
Score = 185 bits (469), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 120/421 (28%), Positives = 200/421 (47%), Gaps = 35/421 (8%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
MY K DAR++FD + RN+ +W + IS +G+ EA+ +I+ R P+ +T
Sbjct: 152 MYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSIT 211
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMIS 120
F + + AC + LG QLH V++SGF + NGLI Y Q+ + +FT +
Sbjct: 212 FCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMG 271
Query: 121 IKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGR 180
K+ +SW S++ + Q +E E + R+ + + ++F++ SV SAC+ + E GR
Sbjct: 272 TKNAVSWCSLVAAYVQ-NHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGR 330
Query: 181 QIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSG 240
IH K + R +F G +L DMY KCG + ++ AF ++ +LV+ N++I +A G
Sbjct: 331 SIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQG 390
Query: 241 DANEAISIFRQMMH--IGLIPDSITFLSLLCACTSPMALNQGMQI-HSYIVKVGFNKEVA 297
+ A+++F +M G P+ +TF+SLL AC+ A+ GM+I S G
Sbjct: 391 QVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAE 450
Query: 298 LYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQ------AGETFRLF 351
Y+ ++ M + + A + + + W A+ +AC H + A E LF
Sbjct: 451 HYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAEN--LF 508
Query: 352 KQMLFSENKPNMITITNLLGTCAELAS---------------------LEVGNQVHCFSV 390
K L ++ N + ++N A + V NQVH F
Sbjct: 509 K--LDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSWITVKNQVHAFQA 566
Query: 391 K 391
K
Sbjct: 567 K 567
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 134/504 (26%), Positives = 220/504 (43%), Gaps = 23/504 (4%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
MY K + AR V RNVVSWTS+ISG +QNG + A+V + +M R G P+ T
Sbjct: 51 MYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFT 110
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMIS 120
F KA G+Q+HA +K G + MY A +F I
Sbjct: 111 FPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIP 170
Query: 121 IKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGR 180
++L +W++ I G EA+ F + R + PN + +ACS L G
Sbjct: 171 ERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGH-PNSITFCAFLNACSDWLHLNLGM 229
Query: 181 QIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSG 240
Q+HG+ + G +V L D Y KC + S++ F ++ + + VSW +++AA+ +
Sbjct: 230 QLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNH 289
Query: 241 DANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYN 300
+ +A ++ + + S+L AC L G IH++ VK + + + +
Sbjct: 290 EDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGS 349
Query: 301 SLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFS--E 358
+L+ MY KC + D+ F+ + + NLV+ N+++ Q LF++M
Sbjct: 350 ALVDMYGKCGCIEDSEQAFDEMPEK-NLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCG 408
Query: 359 NKPNMITITNLLGTCAELASLEVGNQVHCFSVKS--GLVLDVSVSNGLIDMYAKCGSVIH 416
PN +T +LL C+ ++E G ++ S++S G+ + ++DM + G V
Sbjct: 409 PTPNYMTFVSLLSACSRAGAVENGMKIF-DSMRSTYGIEPGAEHYSCIVDMLGRAGMVER 467
Query: 417 AQRVFDSTE-NPNVISWSSLIVGYAMSGLGHEAL----NLFR-KMRNLGVRPNEVTYVGV 470
A P + W +L M G L NLF+ ++ G N V
Sbjct: 468 AYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSG---NHVLLSNT 524
Query: 471 LSACSHIGLVEEGWNLYNTMEEEL 494
+A W NT+ EEL
Sbjct: 525 FAAAGR-------WAEANTVREEL 541
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 341 bits (875), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 197/640 (30%), Positives = 333/640 (52%), Gaps = 41/640 (6%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGF-FPDQL 59
MY + DA +VFD M RN+V+WT+M+SGY+ +G+ N+A+ +Y +ML S ++
Sbjct: 49 MYVDFRLLSDAHKVFDEMSERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEF 108
Query: 60 TFGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMI 119
+ +++KAC + GDI LG ++ + K G +V N ++ MY G++ A+ F I
Sbjct: 109 MYSAVLKACGLVGDIQLGILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEI 168
Query: 120 SIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSV------------- 166
SW+++I G+ + G EA+ LF M + V N + G V
Sbjct: 169 LRPSSTSWNTLISGYCKAGLMDEAVTLFHRMPQPNVVSWNCLISGFVDKGSPRALEFLVR 228
Query: 167 ----------------FSACSSLLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGF 210
ACS G+Q+H K GL + F+ +L DMY+ CG
Sbjct: 229 MQREGLVLDGFALPCGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGS 288
Query: 211 LPSAKTAFYQIE---SPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSL 267
L A F+Q + + + WN++++ F + + A+ + Q+ L DS T
Sbjct: 289 LIYAADVFHQEKLAVNSSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGA 348
Query: 268 LCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNAN 327
L C + + L G+Q+HS +V G+ + + + L+ ++ N+ DA +F + N +
Sbjct: 349 LKICINYVNLRLGLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLP-NKD 407
Query: 328 LVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHC 387
+++++ ++ C++ F LF++++ + ++N+L C+ LASL G Q+H
Sbjct: 408 IIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHG 467
Query: 388 FSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHE 447
+K G + + L+DMY KCG + + +FD +V+SW+ +IVG+ +G E
Sbjct: 468 LCIKKGYESEPVTATALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEE 527
Query: 448 ALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMV 507
A F KM N+G+ PN+VT++G+LSAC H GL+EE + TM+ E G+ P EH+ C+V
Sbjct: 528 AFRYFHKMINIGIEPNKVTFLGLLSACRHSGLLEEARSTLETMKSEYGLEPYLEHYYCVV 587
Query: 508 DLLARAGCLYEAETFIRKTGFDPDITTWKTLLSSCKTHGNVDIAERAAENILKLDPSNSA 567
DLL +AG EA I K +PD T W +LL++C TH N + AE +LK P + +
Sbjct: 588 DLLGQAGLFQEANELINKMPLEPDKTIWTSLLTACGTHKNAGLVTVIAEKLLKGFPDDPS 647
Query: 568 ALVLLSSIHASAGNWEDVAKLRKVLDDGYDPAQRLGIRIS 607
LS+ +A+ G W+ ++K+R + A++LG + S
Sbjct: 648 VYTSLSNAYATLGMWDQLSKVR-------EAAKKLGAKES 680
Score = 198 bits (503), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 143/537 (26%), Positives = 256/537 (47%), Gaps = 36/537 (6%)
Query: 77 GRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIKDLISWSSMIRGFTQ 136
G + AHVIK G ++ N +ISMY +F ++ A VF +S +++++W++M+ G+T
Sbjct: 24 GESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNIVTWTTMVSGYTS 83
Query: 137 LGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVF 196
G +A+ L+R ML NEF+ +V AC + + + G ++ K L +V
Sbjct: 84 DGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIGKENLRGDVV 143
Query: 197 SGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIG 256
S+ DMY K G L A ++F +I P SWN +I+ + +G +EA+++F +M
Sbjct: 144 LMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVTLFHRMPQPN 203
Query: 257 LI--------------PDSITFL-------------SLLC---ACTSPMALNQGMQIHSY 286
++ P ++ FL +L C AC+ L G Q+H
Sbjct: 204 VVSWNCLISGFVDKGSPRALEFLVRMQREGLVLDGFALPCGLKACSFGGLLTMGKQLHCC 263
Query: 287 IVKVGFNKEVALYNSLLTMYTKCSNLHDALSVF--EAISKNANLVSWNAILSACLQHKQA 344
+VK G ++L+ MY+ C +L A VF E ++ N+++ WN++LS L +++
Sbjct: 264 VVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSGFLINEEN 323
Query: 345 GETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGL 404
L Q+ S+ + T++ L C +L +G QVH V SG LD V + L
Sbjct: 324 EAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVSGYELDYIVGSIL 383
Query: 405 IDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNE 464
+D++A G++ A ++F N ++I++S LI G SG A LFR++ LG+ ++
Sbjct: 384 VDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQ 443
Query: 465 VTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIR 524
+L CS + + G ++ ++ G + +VD+ + G +
Sbjct: 444 FIVSNILKVCSSLASLGWGKQIHGLCIKK-GYESEPVTATALVDMYVKCGEIDNGVVLFD 502
Query: 525 KTGFDPDITTWKTLLSSCKTHGNVDIAERAAENILK--LDPSNSAALVLLSSIHASA 579
+ D+ +W ++ +G V+ A R ++ ++P+ L LLS+ S
Sbjct: 503 GM-LERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEPNKVTFLGLLSACRHSG 558
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 103/430 (23%), Positives = 182/430 (42%), Gaps = 45/430 (10%)
Query: 170 CSSLLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSW 229
C + + G I K G+ +NVF ++ MY L A F ++ ++V+W
Sbjct: 15 CGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNIVTW 74
Query: 230 NAIIAAFADSGDANEAISIFRQMMHI-GLIPDSITFLSLLCACTSPMALNQGMQIHSYIV 288
+++ + G N+AI ++R+M+ + + ++L AC + G+ ++ I
Sbjct: 75 TTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIG 134
Query: 289 KVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETF 348
K +V L NS++ MY K L +A S F+ I + ++ SWN ++S + E
Sbjct: 135 KENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSS-TSWNTLISGYCKAGLMDEAV 193
Query: 349 RLFKQMLFSENKPNMITITNL----------------------------------LGTCA 374
LF +M +PN+++ L L C+
Sbjct: 194 TLFHRM----PQPNVVSWNCLISGFVDKGSPRALEFLVRMQREGLVLDGFALPCGLKACS 249
Query: 375 ELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTE---NPNVIS 431
L +G Q+HC VKSGL + LIDMY+ CGS+I+A VF + N +V
Sbjct: 250 FGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAV 309
Query: 432 WSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTME 491
W+S++ G+ ++ AL L ++ + + T G L C + + G +++ +
Sbjct: 310 WNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVV 369
Query: 492 EELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTLLSSCKTHGNVDIA 551
G S +VDL A G + +A + + DI + L+ C G +A
Sbjct: 370 VS-GYELDYIVGSILVDLHANVGNIQDAHKLFHRLP-NKDIIAFSGLIRGCVKSGFNSLA 427
Query: 552 ERAAENILKL 561
++KL
Sbjct: 428 FYLFRELIKL 437
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 341 bits (875), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 192/595 (32%), Positives = 315/595 (52%), Gaps = 31/595 (5%)
Query: 26 WTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTFGSIIKACCIAGDIYLGRQLHAHVI 85
+ S+I GY+ +G NEA++++++M+ SG PD+ TF + AC + G Q+H ++
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161
Query: 86 KSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIKDLISWSSMIRGFTQLGYEIEALY 145
K G+ L QN L+ Y G++ A VF +S ++++SW+SMI G+ + + +A+
Sbjct: 162 KMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVD 221
Query: 146 LFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMY 205
LF M+R PN + V SAC+ L + E G +++ G+ N +L DMY
Sbjct: 222 LFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMY 281
Query: 206 AKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFL 265
KC + AK F + + +L NA+ + + G EA+ +F MM G+ PD I+ L
Sbjct: 282 MKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISML 341
Query: 266 SLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKN 325
S + +C+ + G H Y+++ GF + N+L+ MY KC A +F+ +S
Sbjct: 342 SAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNK 401
Query: 326 A------------------------------NLVSWNAILSACLQHKQAGETFRLFKQML 355
N+VSWN I+S +Q E +F M
Sbjct: 402 TVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQ 461
Query: 356 FSEN-KPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSV 414
E + +T+ ++ C L +L++ ++ + K+G+ LDV + L+DM+++CG
Sbjct: 462 SQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDP 521
Query: 415 IHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSAC 474
A +F+S N +V +W++ I AM+G A+ LF M G++P+ V +VG L+AC
Sbjct: 522 ESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTAC 581
Query: 475 SHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDITT 534
SH GLV++G ++ +M + G+ P H+ CMVDLL RAG L EA I +P+
Sbjct: 582 SHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVI 641
Query: 535 WKTLLSSCKTHGNVDIAERAAENILKLDPSNSAALVLLSSIHASAGNWEDVAKLR 589
W +LL++C+ GNV++A AAE I L P + + VLLS+++ASAG W D+AK+R
Sbjct: 642 WNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVR 696
Score = 175 bits (444), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 131/482 (27%), Positives = 226/482 (46%), Gaps = 47/482 (9%)
Query: 2 YGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLR-SGFFPDQLT 60
Y +CG + AR+VFD M RNVVSWTSMI GY++ +AV ++ +M+R P+ +T
Sbjct: 179 YAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVT 238
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMIS 120
+I AC D+ G +++A + SG + + + L+ MY + A +F
Sbjct: 239 MVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYG 298
Query: 121 IKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGR 180
+L ++M + + G EAL +F M+ GV +P+ + S S+CS L +G+
Sbjct: 299 ASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGV-RPDRISMLSAISSCSQLRNILWGK 357
Query: 181 QIHGICAKFGLVRNVFSG----C-SLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAA 235
HG ++RN F C +L DMY KC +A F ++ + +V+WN+I+A
Sbjct: 358 SCHGY-----VLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAG 412
Query: 236 FADSGDAN-------------------------------EAISIFRQMM-HIGLIPDSIT 263
+ ++G+ + EAI +F M G+ D +T
Sbjct: 413 YVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVT 472
Query: 264 FLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAIS 323
+S+ AC AL+ I+ YI K G +V L +L+ M+++C + A+S+F +++
Sbjct: 473 MMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLT 532
Query: 324 KNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGN 383
N ++ +W A + A A LF M+ KP+ + L C+ ++ G
Sbjct: 533 -NRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGK 591
Query: 384 QVHCFSVKSGLVLDVSVSNG-LIDMYAKCGSVIHA-QRVFDSTENPNVISWSSLIVGYAM 441
++ +K V V G ++D+ + G + A Q + D PN + W+SL+ +
Sbjct: 592 EIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRV 651
Query: 442 SG 443
G
Sbjct: 652 QG 653
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 101/370 (27%), Positives = 176/370 (47%), Gaps = 32/370 (8%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
MY KC ++ A+++FD N+ +M S Y + G EA+ ++ M+ SG PD+++
Sbjct: 280 MYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRIS 339
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMIS 120
S I +C +I G+ H +V+++GF N LI MY + A +F +S
Sbjct: 340 MLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMS 399
Query: 121 IKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLG---------------- 164
K +++W+S++ G+ + G A F M + + N + G
Sbjct: 400 NKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCS 459
Query: 165 ---------------SVFSACSSLLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCG 209
S+ SAC L + + I+ K G+ +V G +L DM+++CG
Sbjct: 460 MQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCG 519
Query: 210 FLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLC 269
SA + F + + D+ +W A I A A +G+A AI +F M+ GL PD + F+ L
Sbjct: 520 DPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALT 579
Query: 270 ACTSPMALNQGMQIHSYIVKV-GFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANL 328
AC+ + QG +I ++K+ G + E Y ++ + + L +A+ + E + N
Sbjct: 580 ACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPND 639
Query: 329 VSWNAILSAC 338
V WN++L+AC
Sbjct: 640 VIWNSLLAAC 649
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 341 bits (875), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 181/546 (33%), Positives = 301/546 (55%), Gaps = 33/546 (6%)
Query: 78 RQLHAHVIKSGFGGHLVAQNGLISM--YTNFGQVAHASDVFTMISIKDLISWSSMIRGFT 135
+Q H H+I++G + + L +M ++F + +A VF I + +W+++IR +
Sbjct: 47 KQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYA 106
Query: 136 QLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNV 195
+ +++ F DM+ + PN++ + A + + G+ +HG+ K + +V
Sbjct: 107 SGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDV 166
Query: 196 FSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHI 255
F SL Y CG L SA F I+ D+VSWN++I F G ++A+ +F++M
Sbjct: 167 FVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESE 226
Query: 256 GLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDA 315
+ +T + +L AC L G Q+ SYI + N + L N++L MYTKC ++ DA
Sbjct: 227 DVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDA 286
Query: 316 LSVFEAISKNAN------------------------------LVSWNAILSACLQHKQAG 345
+F+A+ + N +V+WNA++SA Q+ +
Sbjct: 287 KRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPN 346
Query: 346 ETFRLFKQMLFSEN-KPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGL 404
E +F ++ +N K N IT+ + L CA++ +LE+G +H + K G+ ++ V++ L
Sbjct: 347 EALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSAL 406
Query: 405 IDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNE 464
I MY+KCG + ++ VF+S E +V WS++I G AM G G+EA+++F KM+ V+PN
Sbjct: 407 IHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNG 466
Query: 465 VTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIR 524
VT+ V ACSH GLV+E +L++ ME GI P +H++C+VD+L R+G L +A FI
Sbjct: 467 VTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIE 526
Query: 525 KTGFDPDITTWKTLLSSCKTHGNVDIAERAAENILKLDPSNSAALVLLSSIHASAGNWED 584
P + W LL +CK H N+++AE A +L+L+P N A VLLS+I+A G WE+
Sbjct: 527 AMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWEN 586
Query: 585 VAKLRK 590
V++LRK
Sbjct: 587 VSELRK 592
Score = 201 bits (510), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 134/466 (28%), Positives = 223/466 (47%), Gaps = 37/466 (7%)
Query: 6 GSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQML-RSGFFPDQLTFGSI 64
S++ AR+VFD + N +W ++I Y+ ++ ++ M+ S +P++ TF +
Sbjct: 78 ASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFL 137
Query: 65 IKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIKDL 124
IKA + LG+ LH +KS G + N LI Y + G + A VFT I KD+
Sbjct: 138 IKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDV 197
Query: 125 ISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHG 184
+SW+SMI GF Q G +AL LF+ M + V + ++G V SAC+ + E+GRQ+
Sbjct: 198 VSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVG-VLSACAKIRNLEFGRQVCS 256
Query: 185 ICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIES--------------------- 223
+ + N+ ++ DMY KCG + AK F +E
Sbjct: 257 YIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEA 316
Query: 224 ----------PDLVSWNAIIAAFADSGDANEAISIFRQM-MHIGLIPDSITFLSLLCACT 272
D+V+WNA+I+A+ +G NEA+ +F ++ + + + IT +S L AC
Sbjct: 317 AREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACA 376
Query: 273 SPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWN 332
AL G IHSYI K G + ++L+ MY+KC +L + VF ++ K V W+
Sbjct: 377 QVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFV-WS 435
Query: 333 AILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASL-EVGNQVHCFSVK 391
A++ H E +F +M + KPN +T TN+ C+ + E + H
Sbjct: 436 AMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESN 495
Query: 392 SGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVIS-WSSLI 436
G+V + ++D+ + G + A + ++ P S W +L+
Sbjct: 496 YGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALL 541
Score = 163 bits (413), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 98/372 (26%), Positives = 171/372 (45%), Gaps = 32/372 (8%)
Query: 2 YGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTF 61
Y CG + A +VF + ++VVSW SMI+G+ Q G ++A+ ++ +M +T
Sbjct: 176 YFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTM 235
Query: 62 GSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISI 121
++ AC ++ GRQ+ +++ ++ +L N ++ MYT G + A +F +
Sbjct: 236 VGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEE 295
Query: 122 KDLISWSSMIRGFT-------------------------------QLGYEIEALYLFRDM 150
KD ++W++M+ G+ Q G EAL +F ++
Sbjct: 296 KDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHEL 355
Query: 151 LRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGF 210
Q + N+ L S SAC+ + E GR IH K G+ N +L MY+KCG
Sbjct: 356 QLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGD 415
Query: 211 LPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCA 270
L ++ F +E D+ W+A+I A G NEA+ +F +M + P+ +TF ++ CA
Sbjct: 416 LEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCA 475
Query: 271 CTSPMALNQGMQI-HSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLV 329
C+ +++ + H G E Y ++ + + L A+ EA+ +
Sbjct: 476 CSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTS 535
Query: 330 SWNAILSACLQH 341
W A+L AC H
Sbjct: 536 VWGALLGACKIH 547
Score = 119 bits (298), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 128/269 (47%), Gaps = 35/269 (13%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSM------------------------------- 29
MY KCGS++DA+++FDAM ++ V+WT+M
Sbjct: 276 MYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNAL 335
Query: 30 ISGYSQNGQGNEAVVMYIQM-LRSGFFPDQLTFGSIIKACCIAGDIYLGRQLHAHVIKSG 88
IS Y QNG+ NEA++++ ++ L+ +Q+T S + AC G + LGR +H+++ K G
Sbjct: 336 ISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHG 395
Query: 89 FGGHLVAQNGLISMYTNFGQVAHASDVFTMISIKDLISWSSMIRGFTQLGYEIEALYLFR 148
+ + LI MY+ G + + +VF + +D+ WS+MI G G EA+ +F
Sbjct: 396 IRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFY 455
Query: 149 DMLRQGVYQPNEFVLGSVFSACSSL-LEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAK 207
M V +PN +VF ACS L E H + + +G+V + D+ +
Sbjct: 456 KMQEANV-KPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGR 514
Query: 208 CGFLPSAKTAFYQIESPDLVS-WNAIIAA 235
G+L A + P S W A++ A
Sbjct: 515 SGYLEKAVKFIEAMPIPPSTSVWGALLGA 543
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 341 bits (875), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 192/595 (32%), Positives = 315/595 (52%), Gaps = 31/595 (5%)
Query: 26 WTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTFGSIIKACCIAGDIYLGRQLHAHVI 85
+ S+I GY+ +G NEA++++++M+ SG PD+ TF + AC + G Q+H ++
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161
Query: 86 KSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIKDLISWSSMIRGFTQLGYEIEALY 145
K G+ L QN L+ Y G++ A VF +S ++++SW+SMI G+ + + +A+
Sbjct: 162 KMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVD 221
Query: 146 LFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMY 205
LF M+R PN + V SAC+ L + E G +++ G+ N +L DMY
Sbjct: 222 LFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMY 281
Query: 206 AKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFL 265
KC + AK F + + +L NA+ + + G EA+ +F MM G+ PD I+ L
Sbjct: 282 MKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISML 341
Query: 266 SLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKN 325
S + +C+ + G H Y+++ GF + N+L+ MY KC A +F+ +S
Sbjct: 342 SAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNK 401
Query: 326 A------------------------------NLVSWNAILSACLQHKQAGETFRLFKQML 355
N+VSWN I+S +Q E +F M
Sbjct: 402 TVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQ 461
Query: 356 FSEN-KPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSV 414
E + +T+ ++ C L +L++ ++ + K+G+ LDV + L+DM+++CG
Sbjct: 462 SQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDP 521
Query: 415 IHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSAC 474
A +F+S N +V +W++ I AM+G A+ LF M G++P+ V +VG L+AC
Sbjct: 522 ESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTAC 581
Query: 475 SHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDITT 534
SH GLV++G ++ +M + G+ P H+ CMVDLL RAG L EA I +P+
Sbjct: 582 SHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVI 641
Query: 535 WKTLLSSCKTHGNVDIAERAAENILKLDPSNSAALVLLSSIHASAGNWEDVAKLR 589
W +LL++C+ GNV++A AAE I L P + + VLLS+++ASAG W D+AK+R
Sbjct: 642 WNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVR 696
Score = 176 bits (445), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 131/482 (27%), Positives = 226/482 (46%), Gaps = 47/482 (9%)
Query: 2 YGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRS-GFFPDQLT 60
Y +CG + AR+VFD M RNVVSWTSMI GY++ +AV ++ +M+R P+ +T
Sbjct: 179 YAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVT 238
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMIS 120
+I AC D+ G +++A + SG + + + L+ MY + A +F
Sbjct: 239 MVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYG 298
Query: 121 IKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGR 180
+L ++M + + G EAL +F M+ GV +P+ + S S+CS L +G+
Sbjct: 299 ASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGV-RPDRISMLSAISSCSQLRNILWGK 357
Query: 181 QIHGICAKFGLVRNVFSG----C-SLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAA 235
HG ++RN F C +L DMY KC +A F ++ + +V+WN+I+A
Sbjct: 358 SCHGY-----VLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAG 412
Query: 236 FADSGDAN-------------------------------EAISIFRQMM-HIGLIPDSIT 263
+ ++G+ + EAI +F M G+ D +T
Sbjct: 413 YVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVT 472
Query: 264 FLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAIS 323
+S+ AC AL+ I+ YI K G +V L +L+ M+++C + A+S+F +++
Sbjct: 473 MMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLT 532
Query: 324 KNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGN 383
N ++ +W A + A A LF M+ KP+ + L C+ ++ G
Sbjct: 533 -NRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGK 591
Query: 384 QVHCFSVKSGLVLDVSVSNG-LIDMYAKCGSVIHA-QRVFDSTENPNVISWSSLIVGYAM 441
++ +K V V G ++D+ + G + A Q + D PN + W+SL+ +
Sbjct: 592 EIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRV 651
Query: 442 SG 443
G
Sbjct: 652 QG 653
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 101/370 (27%), Positives = 176/370 (47%), Gaps = 32/370 (8%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
MY KC ++ A+++FD N+ +M S Y + G EA+ ++ M+ SG PD+++
Sbjct: 280 MYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRIS 339
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMIS 120
S I +C +I G+ H +V+++GF N LI MY + A +F +S
Sbjct: 340 MLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMS 399
Query: 121 IKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLG---------------- 164
K +++W+S++ G+ + G A F M + + N + G
Sbjct: 400 NKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCS 459
Query: 165 ---------------SVFSACSSLLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCG 209
S+ SAC L + + I+ K G+ +V G +L DM+++CG
Sbjct: 460 MQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCG 519
Query: 210 FLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLC 269
SA + F + + D+ +W A I A A +G+A AI +F M+ GL PD + F+ L
Sbjct: 520 DPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALT 579
Query: 270 ACTSPMALNQGMQIHSYIVKV-GFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANL 328
AC+ + QG +I ++K+ G + E Y ++ + + L +A+ + E + N
Sbjct: 580 ACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPND 639
Query: 329 VSWNAILSAC 338
V WN++L+AC
Sbjct: 640 VIWNSLLAAC 649
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 336 bits (862), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 187/553 (33%), Positives = 309/553 (55%), Gaps = 38/553 (6%)
Query: 78 RQLHAHVIKSGFGGHLVAQNGLIS---MYTNFGQVAHASDVFTMISIKDLISWSSMIRGF 134
R +HA +IK G A + LI + +F + +A VF I +L+ W++M RG
Sbjct: 50 RIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGH 109
Query: 135 TQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFG---- 190
+ AL L+ M+ G+ PN + V +C+ + G+QIHG K G
Sbjct: 110 ALSSDPVSALKLYVCMISLGLL-PNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLD 168
Query: 191 ------LV---------------------RNVFSGCSLCDMYAKCGFLPSAKTAFYQIES 223
L+ R+V S +L YA G++ +A+ F +I
Sbjct: 169 LYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPV 228
Query: 224 PDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQI 283
D+VSWNA+I+ +A++G+ EA+ +F+ MM + PD T ++++ AC ++ G Q+
Sbjct: 229 KDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQV 288
Query: 284 HSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQ 343
H +I GF + + N+L+ +Y+KC L A +FE + +++SWN ++
Sbjct: 289 HLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYK-DVISWNTLIGGYTHMNL 347
Query: 344 AGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVK--SGLVLDVSVS 401
E LF++ML S PN +T+ ++L CA L ++++G +H + K G+ S+
Sbjct: 348 YKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLR 407
Query: 402 NGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVR 461
LIDMYAKCG + A +VF+S + ++ SW+++I G+AM G + +LF +MR +G++
Sbjct: 408 TSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQ 467
Query: 462 PNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAET 521
P+++T+VG+LSACSH G+++ G +++ TM ++ + P EH+ CM+DLL +G EAE
Sbjct: 468 PDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEE 527
Query: 522 FIRKTGFDPDITTWKTLLSSCKTHGNVDIAERAAENILKLDPSNSAALVLLSSIHASAGN 581
I +PD W +LL +CK HGNV++ E AEN++K++P N + VLLS+I+ASAG
Sbjct: 528 MINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGR 587
Query: 582 WEDVAKLRKVLDD 594
W +VAK R +L+D
Sbjct: 588 WNEVAKTRALLND 600
Score = 207 bits (527), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 124/376 (32%), Positives = 204/376 (54%), Gaps = 6/376 (1%)
Query: 2 YGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTF 61
Y G +++A+++FD + +++VVSW +MISGY++ G EA+ ++ M+++ PD+ T
Sbjct: 210 YASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTM 269
Query: 62 GSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISI 121
+++ AC +G I LGRQ+H + GFG +L N LI +Y+ G++ A +F +
Sbjct: 270 VTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPY 329
Query: 122 KDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQ 181
KD+ISW+++I G+T + EAL LF++MLR G PN+ + S+ AC+ L + GR
Sbjct: 330 KDVISWNTLIGGYTHMNLYKEALLLFQEMLRSG-ETPNDVTMLSILPACAHLGAIDIGRW 388
Query: 182 IH-GICAKFGLVRNVFS-GCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADS 239
IH I + V N S SL DMYAKCG + +A F I L SWNA+I FA
Sbjct: 389 IHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMH 448
Query: 240 GDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVK-VGFNKEVAL 298
G A+ + +F +M IG+ PD ITF+ LL AC+ L+ G I + + ++
Sbjct: 449 GRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEH 508
Query: 299 YNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHK--QAGETFRLFKQMLF 356
Y ++ + +A + + + V W ++L AC H + GE+F +
Sbjct: 509 YGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIE 568
Query: 357 SENKPNMITITNLLGT 372
EN + + ++N+ +
Sbjct: 569 PENPGSYVLLSNIYAS 584
Score = 207 bits (526), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 127/408 (31%), Positives = 203/408 (49%), Gaps = 35/408 (8%)
Query: 11 ARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTFGSIIKACCI 70
A VF + N++ W +M G++ + A+ +Y+ M+ G P+ TF ++K+C
Sbjct: 87 AISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAK 146
Query: 71 AGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTM------------ 118
+ G+Q+H HV+K G L LISMY G++ A VF
Sbjct: 147 SKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTAL 206
Query: 119 -------------------ISIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPN 159
I +KD++SW++MI G+ + G EAL LF+DM++ V +P+
Sbjct: 207 IKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNV-RPD 265
Query: 160 EFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFY 219
E + +V SAC+ E GRQ+H G N+ +L D+Y+KCG L +A F
Sbjct: 266 ESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFE 325
Query: 220 QIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQ 279
++ D++SWN +I + EA+ +F++M+ G P+ +T LS+L AC A++
Sbjct: 326 RLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDI 385
Query: 280 GMQIHSYIVK--VGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSA 337
G IH YI K G +L SL+ MY KC ++ A VF +I + +L SWNA++
Sbjct: 386 GRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSI-LHKSLSSWNAMIFG 444
Query: 338 CLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQV 385
H +A +F LF +M +P+ IT LL C+ L++G +
Sbjct: 445 FAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHI 492
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 123/259 (47%), Gaps = 5/259 (1%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
+Y KCG ++ A +F+ + ++V+SW ++I GY+ EA++++ +MLRSG P+ +T
Sbjct: 310 LYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVT 369
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIK--SGFGGHLVAQNGLISMYTNFGQVAHASDVFTM 118
SI+ AC G I +GR +H ++ K G + LI MY G + A VF
Sbjct: 370 MLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNS 429
Query: 119 ISIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEY 178
I K L SW++MI GF G + LF M + G+ QP++ + SACS +
Sbjct: 430 ILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGI-QPDDITFVGLLSACSHSGMLDL 488
Query: 179 GRQI-HGICAKFGLVRNVFSGCSLCDMYAKCG-FLPSAKTAFYQIESPDLVSWNAIIAAF 236
GR I + + + + + D+ G F + + PD V W +++ A
Sbjct: 489 GRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKAC 548
Query: 237 ADSGDANEAISIFRQMMHI 255
G+ S ++ I
Sbjct: 549 KMHGNVELGESFAENLIKI 567
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 335 bits (860), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 193/632 (30%), Positives = 343/632 (54%), Gaps = 41/632 (6%)
Query: 1 MYGKCGSM-KDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQL 59
MY K G + DA FD + ++VVSW ++I+G+S+N +A + ML+ P+
Sbjct: 166 MYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYA 225
Query: 60 TFGSIIKACC-IAGDIYL--GRQLHAHVI-KSGFGGHLVAQNGLISMYTNFGQVAHASDV 115
T +++ C + +I GRQ+H++V+ +S H+ N L+S Y G++ A+ +
Sbjct: 226 TIANVLPVCASMDKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASL 285
Query: 116 FTMISIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLE 175
FT + KDL+SW+ +I G+ +A LF +++ +G P+ + S+ C+ L +
Sbjct: 286 FTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTD 345
Query: 176 PEYGRQIHGICAKFG-LVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIA 234
G++IH + L+ + G +L YA+ G +A AF + + D++SWNAI+
Sbjct: 346 LASGKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILD 405
Query: 235 AFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGF-- 292
AFADS + +++ +++ + DS+T LSLL C + + + ++H Y VK G
Sbjct: 406 AFADSPKQFQFLNLLHHLLNEAITLDSVTILSLLKFCINVQGIGKVKEVHGYSVKAGLLH 465
Query: 293 -NKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLF 351
+E L N+LL Y KC N+ A +F +S+ LVS+N++LS + + LF
Sbjct: 466 DEEEPKLGNALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLF 525
Query: 352 KQM-------------LFSEN------------------KPNMITITNLLGTCAELASLE 380
+M +++E+ +PN +TI NLL CA+LASL
Sbjct: 526 TEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLH 585
Query: 381 VGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYA 440
+ Q H + ++ GL D+ + L+D+YAKCGS+ HA VF S +++ +++++ GYA
Sbjct: 586 LVRQCHGYIIRGGLG-DIRLKGTLLDVYAKCGSLKHAYSVFQSDARRDLVMFTAMVAGYA 644
Query: 441 MSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAR 500
+ G G EAL ++ M ++P+ V +L+AC H GL+++G +Y+++ G+ P
Sbjct: 645 VHGRGKEALMIYSHMTESNIKPDHVFITTMLTACCHAGLIQDGLQIYDSIRTVHGMKPTM 704
Query: 501 EHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTLLSSCKTHGNVDIAERAAENILK 560
E ++C VDL+AR G L +A +F+ + +P+ W TLL +C T+ +D+ A ++L+
Sbjct: 705 EQYACAVDLIARGGRLDDAYSFVTQMPVEPNANIWGTLLRACTTYNRMDLGHSVANHLLQ 764
Query: 561 LDPSNSAALVLLSSIHASAGNWEDVAKLRKVL 592
+ ++ VL+S+++A+ WE V +LR ++
Sbjct: 765 AESDDTGNHVLISNMYAADAKWEGVMELRNLM 796
Score = 223 bits (569), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 154/521 (29%), Positives = 265/521 (50%), Gaps = 46/521 (8%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQM-LRSGFFPDQL 59
MY KC M D +++F M + V W +++G S + G E + + M P +
Sbjct: 65 MYAKCRRMDDCQKMFRQMDSLDPVVWNIVLTGLSVSC-GRETMRFFKAMHFADEPKPSSV 123
Query: 60 TFGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQV-AHASDVFTM 118
TF ++ C GD Y G+ +H+++IK+G + N L+SMY FG + A F
Sbjct: 124 TFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDG 183
Query: 119 ISIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSL---LE 175
I+ KD++SW+++I GF++ +A F ML++ +PN + +V C+S+ +
Sbjct: 184 IADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPT-EPNYATIANVLPVCASMDKNIA 242
Query: 176 PEYGRQIHG-ICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIA 234
GRQIH + + L +VF SL Y + G + A + F ++ S DLVSWN +IA
Sbjct: 243 CRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIA 302
Query: 235 AFADSGDANEAISIFRQMMHIGLI-PDSITFLSLLCACTSPMALNQGMQIHSYIVKVGF- 292
+A + + +A +F ++H G + PDS+T +S+L C L G +IHSYI++ +
Sbjct: 303 GYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYL 362
Query: 293 NKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFK 352
++ ++ N+L++ Y + + A F +S +++SWNAIL A + + L
Sbjct: 363 LEDTSVGNALISFYARFGDTSAAYWAFSLMSTK-DIISWNAILDAFADSPKQFQFLNLLH 421
Query: 353 QMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLD---VSVSNGLIDMYA 409
+L + +TI +LL C + + +VH +SVK+GL+ D + N L+D YA
Sbjct: 422 HLLNEAITLDSVTILSLLKFCINVQGIGKVKEVHGYSVKAGLLHDEEEPKLGNALLDAYA 481
Query: 410 KCGSVIHAQRVF-DSTENPNVISWSSLIVGYAMSG------------------------- 443
KCG+V +A ++F +E ++S++SL+ GY SG
Sbjct: 482 KCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVR 541
Query: 444 ------LGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIG 478
+EA+ +FR+++ G+RPN VT + +L C+ +
Sbjct: 542 IYAESCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLA 582
Score = 181 bits (458), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 147/526 (27%), Positives = 252/526 (47%), Gaps = 29/526 (5%)
Query: 46 YIQMLR--SGFFPDQLTFGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMY 103
++Q R SGF D F ++KAC D+ GR LH V K G +++MY
Sbjct: 7 FVQNFRLLSGFGTDHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMY 66
Query: 104 TNFGQVAHASDVFTMISIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVL 163
++ +F + D + W+ ++ G + + E + F+ M +P+
Sbjct: 67 AKCRRMDDCQKMFRQMDSLDPVVWNIVLTGLS-VSCGRETMRFFKAMHFADEPKPSSVTF 125
Query: 164 GSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFL-PSAKTAFYQIE 222
V C L + G+ +H K GL ++ G +L MYAK GF+ P A TAF I
Sbjct: 126 AIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIA 185
Query: 223 SPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTS---PMALNQ 279
D+VSWNAIIA F+++ +A F M+ P+ T ++L C S +A
Sbjct: 186 DKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRS 245
Query: 280 GMQIHSYIVKVGF-NKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSAC 338
G QIHSY+V+ + V + NSL++ Y + + +A S+F + + +LVSWN +++
Sbjct: 246 GRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMG-SKDLVSWNVVIAGY 304
Query: 339 LQHKQAGETFRLFKQMLFSEN-KPNMITITNLLGTCAELASLEVGNQVHCFSVK-SGLVL 396
+ + + F+LF ++ + P+ +TI ++L CA+L L G ++H + ++ S L+
Sbjct: 305 ASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLE 364
Query: 397 DVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMR 456
D SV N LI YA+ G A F ++ISW++++ +A S + LNL +
Sbjct: 365 DTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLNLLHHLL 424
Query: 457 NLGVRPNEVTYVGVLSACSH---IGLVEE--GWN-----LYNTMEEELGIPPAREHFSCM 506
N + + VT + +L C + IG V+E G++ L++ E +LG + +
Sbjct: 425 NEAITLDSVTILSLLKFCINVQGIGKVKEVHGYSVKAGLLHDEEEPKLG--------NAL 476
Query: 507 VDLLARAGCLYEAETFIRKTGFDPDITTWKTLLSSCKTHGNVDIAE 552
+D A+ G + A + ++ +LLS G+ D A+
Sbjct: 477 LDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQ 522
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 335 bits (859), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 190/602 (31%), Positives = 330/602 (54%), Gaps = 18/602 (2%)
Query: 2 YGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGF---FPDQ 58
Y KCG ++DA VFD M R+VV+WT++ISG+ QNG+ + +M +G P+
Sbjct: 171 YSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNP 230
Query: 59 LTFGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTM 118
T +AC G + GR LH +K+G Q+ + S Y+ G + A F
Sbjct: 231 RTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRE 290
Query: 119 ISIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEY 178
+ +D+ SW+S+I + G E+ +F +M +G++ P+ V+ + + ++
Sbjct: 291 LGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMH-PDGVVISCLINELGKMMLVPQ 349
Query: 179 GRQIHGICAKFGLVRNVFS----GC-SLCDMYAKCGFLPSAKTAFYQI-ESPDLVSWNAI 232
G+ HG ++R+ FS C SL MY K L A+ F +I E + +WN +
Sbjct: 350 GKAFHGF-----VIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTM 404
Query: 233 IAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGF 292
+ + + I +FR++ ++G+ DS + S++ +C+ A+ G +H Y+VK
Sbjct: 405 LKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSL 464
Query: 293 NKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFK 352
+ +++ NSL+ +Y K +L A +F + N+++WNA++++ + +Q+ + LF
Sbjct: 465 DLTISVVNSLIDLYGKMGDLTVAWRMF--CEADTNVITWNAMIASYVHCEQSEKAIALFD 522
Query: 353 QMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCG 412
+M+ KP+ IT+ LL C SLE G +H + ++ +++S+S LIDMYAKCG
Sbjct: 523 RMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCG 582
Query: 413 SVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLS 472
+ ++ +FD+ + + W+ +I GY M G A+ LF +M V+P T++ +LS
Sbjct: 583 HLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALLS 642
Query: 473 ACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDI 532
AC+H GLVE+G L+ M + + P +H+SC+VDLL+R+G L EAE+ + F PD
Sbjct: 643 ACTHAGLVEQGKKLFLKM-HQYDVKPNLKHYSCLVDLLSRSGNLEEAESTVMSMPFSPDG 701
Query: 533 TTWKTLLSSCKTHGNVDIAERAAENILKLDPSNSAALVLLSSIHASAGNWEDVAKLRKVL 592
W TLLSSC THG ++ R AE + DP N ++L++++++AG WE+ + R+++
Sbjct: 702 VIWGTLLSSCMTHGEFEMGIRMAERAVASDPQNDGYYIMLANMYSAAGKWEEAERAREMM 761
Query: 593 DD 594
+
Sbjct: 762 RE 763
Score = 241 bits (616), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 163/581 (28%), Positives = 285/581 (49%), Gaps = 14/581 (2%)
Query: 2 YGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTF 61
Y G + +VF + R++ W S+I + NG ++ + ML SG PD T
Sbjct: 69 YASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDYARSLCFFFSMLLSGQSPDHFTA 128
Query: 62 GSIIKACCIAGDIYLGRQLHAHVIK-SGFGGHLVAQNGLISMYTNFGQVAHASDVFTMIS 120
++ AC ++G +H V+K GF + + Y+ G + A VF +
Sbjct: 129 PMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMP 188
Query: 121 IKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQG--VYQPNEFVLGSVFSACSSLLEPEY 178
+D+++W+++I G Q G L M G V +PN L F ACS+L +
Sbjct: 189 DRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKE 248
Query: 179 GRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFAD 238
GR +HG K GL + F S+ Y+K G A +F ++ D+ SW +IIA+ A
Sbjct: 249 GRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLAR 308
Query: 239 SGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVAL 298
SGD E+ +F +M + G+ PD + L+ M + QG H ++++ F+ + +
Sbjct: 309 SGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGFVIRHCFSLDSTV 368
Query: 299 YNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSE 358
NSLL+MY K L A +F IS+ N +WN +L + K + LF+++
Sbjct: 369 CNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIELFRKIQNLG 428
Query: 359 NKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQ 418
+ + + T+++ +C+ + ++ +G +HC+ VK+ L L +SV N LID+Y K G + A
Sbjct: 429 IEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAW 488
Query: 419 RVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIG 478
R+F + NVI+W+++I Y +A+ LF +M + +P+ +T V +L AC + G
Sbjct: 489 RMF-CEADTNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTG 547
Query: 479 LVEEGWNLYNTM---EEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTW 535
+E G ++ + E E+ + + + ++D+ A+ G L ++ G D W
Sbjct: 548 SLERGQMIHRYITETEHEMNLSLS----AALIDMYAKCGHLEKSRELF-DAGNQKDAVCW 602
Query: 536 KTLLSSCKTHGNVDIAERAAENILKLD--PSNSAALVLLSS 574
++S HG+V+ A + + + D P+ L LLS+
Sbjct: 603 NVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALLSA 643
Score = 185 bits (469), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 129/470 (27%), Positives = 233/470 (49%), Gaps = 12/470 (2%)
Query: 78 RQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIKDLISWSSMIRGFTQL 137
R+ +A +I G ++ + LIS Y ++G+ +S VF +++ +D+ W+S+I+
Sbjct: 44 RKHNALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSN 103
Query: 138 GYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKF-GLVRNVF 196
G +L F ML G P+ F V SAC+ LL G +HG+ K G RN
Sbjct: 104 GDYARSLCFFFSMLLSG-QSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTA 162
Query: 197 SGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIG 256
G S Y+KCGFL A F ++ D+V+W AII+ +G++ + +M G
Sbjct: 163 VGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAG 222
Query: 257 LIPDSITFLSLLC---ACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLH 313
D +L C AC++ AL +G +H + VK G + +S+ + Y+K N
Sbjct: 223 SDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPS 282
Query: 314 DALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTC 373
+A F + + ++ SW +I+++ + E+F +F +M P+ + I+ L+
Sbjct: 283 EAYLSFRELG-DEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINEL 341
Query: 374 AELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVF-DSTENPNVISW 432
++ + G H F ++ LD +V N L+ MY K + A+++F +E N +W
Sbjct: 342 GKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAW 401
Query: 433 SSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLY-NTME 491
++++ GY + + LFRK++NLG+ + + V+S+CSHIG V G +L+ ++
Sbjct: 402 NTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVK 461
Query: 492 EELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTLLSS 541
L + + + ++DL + G L A + D ++ TW +++S
Sbjct: 462 TSLDLTISV--VNSLIDLYGKMGDLTVAWRMFCEA--DTNVITWNAMIAS 507
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 88/318 (27%), Positives = 155/318 (48%), Gaps = 5/318 (1%)
Query: 170 CSSLLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSW 229
C L E R+ + + GL N+F L YA G + F+ + D+ W
Sbjct: 34 CDQSLSLESLRKHNALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLW 93
Query: 230 NAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVK 289
N+II A +GD ++ F M+ G PD T ++ AC + + G +H ++K
Sbjct: 94 NSIIKAHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLK 153
Query: 290 V-GFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETF 348
GF++ A+ S + Y+KC L DA VF+ + + ++V+W AI+S +Q+ ++
Sbjct: 154 HGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEM-PDRDVVAWTAIISGHVQNGESEGGL 212
Query: 349 RLFKQMLFSE---NKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLI 405
+M + +KPN T+ C+ L +L+ G +H F+VK+GL V + +
Sbjct: 213 GYLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMF 272
Query: 406 DMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEV 465
Y+K G+ A F + ++ SW+S+I A SG E+ ++F +M+N G+ P+ V
Sbjct: 273 SFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGV 332
Query: 466 TYVGVLSACSHIGLVEEG 483
+++ + LV +G
Sbjct: 333 VISCLINELGKMMLVPQG 350
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 90/188 (47%), Gaps = 10/188 (5%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
MY KCG ++ +R++FDA + ++ V W MISGY +G A+ ++ QM S P T
Sbjct: 577 MYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPT 636
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHA-SDVFTMI 119
F +++ AC AG + G++L + + +L + L+ + + G + A S V +M
Sbjct: 637 FLALLSACTHAGLVEQGKKLFLKMHQYDVKPNLKHYSCLVDLLSRSGNLEEAESTVMSMP 696
Query: 120 SIKDLISW-----SSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLL 174
D + W S M G ++G + + D G Y +L +++SA
Sbjct: 697 FSPDGVIWGTLLSSCMTHGEFEMGIRMAERAVASDPQNDGYY----IMLANMYSAAGKWE 752
Query: 175 EPEYGRQI 182
E E R++
Sbjct: 753 EAERAREM 760
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 335 bits (859), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 193/589 (32%), Positives = 304/589 (51%), Gaps = 35/589 (5%)
Query: 32 GYSQNGQGNEAVVMYIQMLRSGFFPDQLTFGSIIKACCIAGDIYLGRQLHAHVIKSGFGG 91
G Q +++ ++R+ +P+ + +I+ A + R++ + +
Sbjct: 15 GLGARNQSRYVKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQP---- 70
Query: 92 HLVAQNGLISMYTNFGQVAHASDVFTMISIKDLISWSSMIRGFTQLGYEIEALYLFRDML 151
+L + N L+ Y+ G ++ F + +D ++W+ +I G++ G A+ + M+
Sbjct: 71 NLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMM 130
Query: 152 RQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFL 211
R L ++ SS G+QIHG K G + G L MYA G +
Sbjct: 131 RDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCI 190
Query: 212 PSAKTAFYQIE------------------------------SPDLVSWNAIIAAFADSGD 241
AK FY ++ D VSW A+I A +G
Sbjct: 191 SDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGL 250
Query: 242 ANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNS 301
A EAI FR+M GL D F S+L AC A+N+G QIH+ I++ F + + ++
Sbjct: 251 AKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSA 310
Query: 302 LLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKP 361
L+ MY KC LH A +VF+ + K N+VSW A++ Q +A E ++F M S P
Sbjct: 311 LIDMYCKCKCLHYAKTVFDRM-KQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDP 369
Query: 362 NMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVF 421
+ T+ + CA ++SLE G+Q H ++ SGL+ V+VSN L+ +Y KCG + + R+F
Sbjct: 370 DHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLF 429
Query: 422 DSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVE 481
+ + +SW++++ YA G E + LF KM G++P+ VT GV+SACS GLVE
Sbjct: 430 NEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVE 489
Query: 482 EGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTLLSS 541
+G + M E GI P+ H+SCM+DL +R+G L EA FI F PD W TLLS+
Sbjct: 490 KGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSA 549
Query: 542 CKTHGNVDIAERAAENILKLDPSNSAALVLLSSIHASAGNWEDVAKLRK 590
C+ GN++I + AAE++++LDP + A LLSSI+AS G W+ VA+LR+
Sbjct: 550 CRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRR 598
Score = 230 bits (586), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 142/469 (30%), Positives = 239/469 (50%), Gaps = 37/469 (7%)
Query: 2 YGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPD--QL 59
Y K G + + F+ + R+ V+W +I GYS +G AV Y M+R F + ++
Sbjct: 82 YSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRD-FSANLTRV 140
Query: 60 TFGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVF--- 116
T +++K G + LG+Q+H VIK GF +L+ + L+ MY N G ++ A VF
Sbjct: 141 TLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGL 200
Query: 117 ------------------TMISI---------KDLISWSSMIRGFTQLGYEIEALYLFRD 149
MI KD +SW++MI+G Q G EA+ FR+
Sbjct: 201 DDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFRE 260
Query: 150 MLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCG 209
M QG+ + +++ GSV AC L G+QIH + +++ G +L DMY KC
Sbjct: 261 MKVQGL-KMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCK 319
Query: 210 FLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLC 269
L AKT F +++ ++VSW A++ + +G A EA+ IF M G+ PD T +
Sbjct: 320 CLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAIS 379
Query: 270 ACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLV 329
AC + +L +G Q H + G V + NSL+T+Y KC ++ D+ +F ++ + V
Sbjct: 380 ACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVR-DAV 438
Query: 330 SWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQ-VHCF 388
SW A++SA Q +A ET +LF +M+ KP+ +T+T ++ C+ +E G +
Sbjct: 439 SWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLM 498
Query: 389 SVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTE-NPNVISWSSLI 436
+ + G+V + + +ID++++ G + A R + P+ I W++L+
Sbjct: 499 TSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLL 547
Score = 206 bits (525), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 108/335 (32%), Positives = 181/335 (54%), Gaps = 3/335 (0%)
Query: 5 CGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTFGSI 64
CG ++DA Q+F M ++ VSW +MI G +QNG EA+ + +M G DQ FGS+
Sbjct: 218 CGMIEDALQLFRGME-KDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSV 276
Query: 65 IKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIKDL 124
+ AC G I G+Q+HA +I++ F H+ + LI MY + +A VF + K++
Sbjct: 277 LPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNV 336
Query: 125 ISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHG 184
+SW++M+ G+ Q G EA+ +F DM R G+ P+ + LG SAC+++ E G Q HG
Sbjct: 337 VSWTAMVVGYGQTGRAEEAVKIFLDMQRSGI-DPDHYTLGQAISACANVSSLEEGSQFHG 395
Query: 185 ICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANE 244
GL+ V SL +Y KCG + + F ++ D VSW A+++A+A G A E
Sbjct: 396 KAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVE 455
Query: 245 AISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIV-KVGFNKEVALYNSLL 303
I +F +M+ GL PD +T ++ AC+ + +G + + + G + Y+ ++
Sbjct: 456 TIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMI 515
Query: 304 TMYTKCSNLHDALSVFEAISKNANLVSWNAILSAC 338
++++ L +A+ + + + W +LSAC
Sbjct: 516 DLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSAC 550
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 77/243 (31%), Positives = 131/243 (53%), Gaps = 3/243 (1%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
MY KC + A+ VFD M +NVVSWT+M+ GY Q G+ EAV +++ M RSG PD T
Sbjct: 314 MYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYT 373
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMIS 120
G I AC + G Q H I SG ++ N L+++Y G + ++ +F ++
Sbjct: 374 LGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMN 433
Query: 121 IKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYG- 179
++D +SW++M+ + Q G +E + LF M++ G+ +P+ L V SACS E G
Sbjct: 434 VRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGL-KPDGVTLTGVISACSRAGLVEKGQ 492
Query: 180 RQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIE-SPDLVSWNAIIAAFAD 238
R + +++G+V ++ + D++++ G L A + PD + W +++A +
Sbjct: 493 RYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRN 552
Query: 239 SGD 241
G+
Sbjct: 553 KGN 555
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 333 bits (855), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 190/566 (33%), Positives = 308/566 (54%), Gaps = 11/566 (1%)
Query: 34 SQNGQGNEAVVMYIQMLRSGFFPDQLTFGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHL 93
S++ + NEA +M ++G ++ + +AC + GR LH + +
Sbjct: 59 SKHRKLNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRMGIENPSV 118
Query: 94 VAQNGLISMYTNFGQVAHASDVFTMISIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQ 153
+ QN ++ MY + A +F +S + +S ++MI + + G +A+ LF ML
Sbjct: 119 LLQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLAS 178
Query: 154 GVYQPNEFVLGSVFSACSSLLEP---EYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGF 210
G P+ + SL+ P ++GRQIH + GL N + +MY KCG+
Sbjct: 179 GDKPPSSMYT----TLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGW 234
Query: 211 LPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCA 270
L AK F Q+ V+ ++ + +G A +A+ +F ++ G+ DS F +L A
Sbjct: 235 LVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKA 294
Query: 271 CTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVS 330
C S LN G QIH+ + K+G EV++ L+ Y KCS+ A F+ I + N VS
Sbjct: 295 CASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEI-REPNDVS 353
Query: 331 WNAILSACLQHKQAGETFRLFKQMLFSENKP--NMITITNLLGTCAELASLEVGNQVHCF 388
W+AI+S Q Q E + FK L S+N N T T++ C+ LA +G QVH
Sbjct: 354 WSAIISGYCQMSQFEEAVKTFKS-LRSKNASILNSFTYTSIFQACSVLADCNIGGQVHAD 412
Query: 389 SVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEA 448
++K L+ + LI MY+KCG + A VF+S +NP++++W++ I G+A G EA
Sbjct: 413 AIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEA 472
Query: 449 LNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVD 508
L LF KM + G++PN VT++ VL+ACSH GLVE+G + +TM + + P +H+ CM+D
Sbjct: 473 LRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMID 532
Query: 509 LLARAGCLYEAETFIRKTGFDPDITTWKTLLSSCKTHGNVDIAERAAENILKLDPSNSAA 568
+ AR+G L EA F++ F+PD +WK LS C TH N+++ E A E + +LDP ++A
Sbjct: 533 IYARSGLLDEALKFMKNMPFEPDAMSWKCFLSGCWTHKNLELGEIAGEELRQLDPEDTAG 592
Query: 569 LVLLSSIHASAGNWEDVAKLRKVLDD 594
VL +++ AG WE+ A++ K++++
Sbjct: 593 YVLPFNLYTWAGKWEEAAEMMKLMNE 618
Score = 244 bits (624), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 147/443 (33%), Positives = 236/443 (53%), Gaps = 9/443 (2%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
MY +C S++DA ++FD M N VS T+MIS Y++ G ++AV ++ ML SG P
Sbjct: 127 MYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPSSM 186
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMIS 120
+ +++K+ + GRQ+HAHVI++G + + G+++MY G + A VF ++
Sbjct: 187 YTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMA 246
Query: 121 IKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGR 180
+K ++ + ++ G+TQ G +AL LF D++ +GV + + FV V AC+SL E G+
Sbjct: 247 VKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGV-EWDSFVFSVVLKACASLEELNLGK 305
Query: 181 QIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSG 240
QIH AK GL V G L D Y KC SA AF +I P+ VSW+AII+ +
Sbjct: 306 QIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMS 365
Query: 241 DANEAISIFRQMMHIGL-IPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALY 299
EA+ F+ + I +S T+ S+ AC+ N G Q+H+ +K
Sbjct: 366 QFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGE 425
Query: 300 NSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSEN 359
++L+TMY+KC L DA VFE++ N ++V+W A +S + A E RLF++M+
Sbjct: 426 SALITMYSKCGCLDDANEVFESMD-NPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGM 484
Query: 360 KPNMITITNLLGTCAELASLEVGNQVHCFSV---KSGLVLDVSVSNGLIDMYAKCGSVIH 416
KPN +T +L C+ +E G HC K + + + +ID+YA+ G +
Sbjct: 485 KPNSVTFIAVLTACSHAGLVEQGK--HCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDE 542
Query: 417 AQRVFDSTE-NPNVISWSSLIVG 438
A + + P+ +SW + G
Sbjct: 543 ALKFMKNMPFEPDAMSWKCFLSG 565
Score = 198 bits (503), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 107/356 (30%), Positives = 184/356 (51%), Gaps = 7/356 (1%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
MY KCG + A++VFD M ++ V+ T ++ GY+Q G+ +A+ +++ ++ G D
Sbjct: 228 MYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFV 287
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMIS 120
F ++KAC ++ LG+Q+HA V K G + L+ Y A F I
Sbjct: 288 FSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIR 347
Query: 121 IKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGR 180
+ +SWS++I G+ Q+ EA+ F+ + + N F S+F ACS L + G
Sbjct: 348 EPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGG 407
Query: 181 QIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSG 240
Q+H K L+ + + +L MY+KCG L A F +++PD+V+W A I+ A G
Sbjct: 408 QVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYG 467
Query: 241 DANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQ-IHSYIVKVGFNKEVALY 299
+A+EA+ +F +M+ G+ P+S+TF+++L AC+ + QG + + + K + Y
Sbjct: 468 NASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHY 527
Query: 300 NSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQ------AGETFR 349
+ ++ +Y + L +AL + + + +SW LS C HK AGE R
Sbjct: 528 DCMIDIYARSGLLDEALKFMKNMPFEPDAMSWKCFLSGCWTHKNLELGEIAGEELR 583
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 333 bits (854), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 176/506 (34%), Positives = 291/506 (57%), Gaps = 11/506 (2%)
Query: 92 HLVAQNGLISMYTNFGQVAHASDVFTMISIKDLISWSSMIRGFTQLGYEIEALYLFRDML 151
H++A N LI Y G V A +F + +D+++W++MI G+ Y A F +M+
Sbjct: 45 HILATN-LIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMV 103
Query: 152 RQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGF- 210
+QG PNEF L SV +C ++ YG +HG+ K G+ +++ ++ +MYA C
Sbjct: 104 KQGT-SPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVT 162
Query: 211 LPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMM--HIGLIPDSITFLSLL 268
+ +A F I+ + V+W +I F GD + +++QM+ + + P IT +
Sbjct: 163 MEAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIA--V 220
Query: 269 CACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANL 328
A S ++ G QIH+ ++K GF + + NS+L +Y +C L +A F + ++ +L
Sbjct: 221 RASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEM-EDKDL 279
Query: 329 VSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCF 388
++WN ++S L+ + E +F++ PN T T+L+ CA +A+L G Q+H
Sbjct: 280 ITWNTLISE-LERSDSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGR 338
Query: 389 SVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVF-DSTENPNVISWSSLIVGYAMSGLGHE 447
+ G +V ++N LIDMYAKCG++ +QRVF + + N++SW+S+++GY G G E
Sbjct: 339 IFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAE 398
Query: 448 ALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMV 507
A+ LF KM + G+RP+ + ++ VLSAC H GLVE+G +N ME E GI P R+ ++C+V
Sbjct: 399 AVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVV 458
Query: 508 DLLARAGCLYEAETFIRKTGFDPDITTWKTLLSSCKTHGNVDIAER-AAENILKLDPSNS 566
DLL RAG + EA + + F PD +TW +L +CK H + + R AA +++L P
Sbjct: 459 DLLGRAGKIGEAYELVERMPFKPDESTWGAILGACKAHKHNGLISRLAARKVMELKPKMV 518
Query: 567 AALVLLSSIHASAGNWEDVAKLRKVL 592
V+LS I+A+ G W D A++RK++
Sbjct: 519 GTYVMLSYIYAAEGKWVDFARVRKMM 544
Score = 242 bits (618), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 135/438 (30%), Positives = 233/438 (53%), Gaps = 5/438 (1%)
Query: 2 YGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTF 61
Y + G +++AR +FD M R+VV+WT+MI+GY+ + A + +M++ G P++ T
Sbjct: 55 YFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQGTSPNEFTL 114
Query: 62 GSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHAS-DVFTMIS 120
S++K+C + G +H V+K G G L N +++MY A+ +F I
Sbjct: 115 SSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACLIFRDIK 174
Query: 121 IKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGR 180
+K+ ++W+++I GFT LG I L +++ ML + + + + A +S+ G+
Sbjct: 175 VKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENA-EVTPYCITIAVRASASIDSVTTGK 233
Query: 181 QIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSG 240
QIH K G N+ S+ D+Y +CG+L AK F+++E DL++WN +I+ S
Sbjct: 234 QIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISELERS- 292
Query: 241 DANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYN 300
D++EA+ +F++ G +P+ TF SL+ AC + ALN G Q+H I + GFNK V L N
Sbjct: 293 DSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELAN 352
Query: 301 SLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENK 360
+L+ MY KC N+ D+ VF I NLVSW +++ H E LF +M+ S +
Sbjct: 353 ALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIR 412
Query: 361 PNMITITNLLGTCAELASLEVG-NQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQR 419
P+ I +L C +E G + + G+ D + N ++D+ + G + A
Sbjct: 413 PDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEAYE 472
Query: 420 VFDSTE-NPNVISWSSLI 436
+ + P+ +W +++
Sbjct: 473 LVERMPFKPDESTWGAIL 490
Score = 115 bits (288), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 129/240 (53%), Gaps = 9/240 (3%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
+Y +CG + +A+ F M +++++W ++IS ++ +EA++M+ + GF P+ T
Sbjct: 257 LYCRCGYLSEAKHYFHEMEDKDLITWNTLISELERS-DSSEALLMFQRFESQGFVPNCYT 315
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVF-TMI 119
F S++ AC + G+QLH + + GF ++ N LI MY G + + VF ++
Sbjct: 316 FTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIV 375
Query: 120 SIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYG 179
++L+SW+SM+ G+ GY EA+ LF M+ G+ +P+ V +V SAC E G
Sbjct: 376 DRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGI-RPDRIVFMAVLSACRHAGLVEKG 434
Query: 180 RQIHGIC-AKFGL--VRNVFSGCSLCDMYAKCGFLPSAKTAFYQIE-SPDLVSWNAIIAA 235
+ + +++G+ R++++ + D+ + G + A ++ PD +W AI+ A
Sbjct: 435 LKYFNVMESEYGINPDRDIYN--CVVDLLGRAGKIGEAYELVERMPFKPDESTWGAILGA 492
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 332 bits (851), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 196/604 (32%), Positives = 310/604 (51%), Gaps = 47/604 (7%)
Query: 1 MYGKCGSMKD-ARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQL 59
MY KCG + D +VF+++ N VS+T++I G ++ + EAV M+ M G D +
Sbjct: 182 MYAKCGFIVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSV 241
Query: 60 TFGSII------KACCIAGDIY---LGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVA 110
+I+ + C +IY LG+Q+H ++ GFGG L N L+ +Y +
Sbjct: 242 CLSNILSISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMN 301
Query: 111 HASDVFTMISIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSAC 170
A +F + +++SW+ MI GF Q Y + F +R +QPNE SV AC
Sbjct: 302 GAELIFAEMPEVNVVSWNIMIVGFGQ-EYRSDKSVEFLTRMRDSGFQPNEVTCISVLGAC 360
Query: 171 SSLLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWN 230
+ E GR+I F I P + +WN
Sbjct: 361 FRSGDVETGRRI-----------------------------------FSSIPQPSVSAWN 385
Query: 231 AIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKV 290
A+++ +++ EAIS FRQM L PD T +L +C L G QIH +++
Sbjct: 386 AMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRT 445
Query: 291 GFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRL 350
+K + + L+ +Y++C + + +F+ ++ WN+++S + + L
Sbjct: 446 EISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKALIL 505
Query: 351 FKQMLFSENK-PNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYA 409
F++M + PN + +L +C+ L SL G Q H VKSG V D V L DMY
Sbjct: 506 FRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYC 565
Query: 410 KCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVG 469
KCG + A++ FD+ N + W+ +I GY +G G EA+ L+RKM + G +P+ +T+V
Sbjct: 566 KCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVS 625
Query: 470 VLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFD 529
VL+ACSH GLVE G + ++M+ GI P +H+ C+VD L RAG L +AE T +
Sbjct: 626 VLTACSHSGLVETGLEILSSMQRIHGIEPELDHYICIVDCLGRAGRLEDAEKLAEATPYK 685
Query: 530 PDITTWKTLLSSCKTHGNVDIAERAAENILKLDPSNSAALVLLSSIHASAGNWEDVAKLR 589
W+ LLSSC+ HG+V +A R AE +++LDP +SAA VLLS+ ++S W+D A L+
Sbjct: 686 SSSVLWEILLSSCRVHGDVSLARRVAEKLMRLDPQSSAAYVLLSNTYSSLRQWDDSAALQ 745
Query: 590 KVLD 593
+++
Sbjct: 746 GLMN 749
Score = 193 bits (490), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 167/657 (25%), Positives = 283/657 (43%), Gaps = 148/657 (22%)
Query: 77 GRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIKDL------------ 124
G+ +H +++ G N L+ +Y G +A VF +S++D+
Sbjct: 25 GKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCK 84
Query: 125 -------------------ISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGS 165
+SW++MI + G+E +AL +++ M+ G + P+ F L S
Sbjct: 85 VGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDG-FLPSRFTLAS 143
Query: 166 VFSACSSLLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPS-AKTAFYQIESP 224
V SACS +L+ +G + HG+ K GL +N+F G +L MYAKCGF+ F + P
Sbjct: 144 VLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQP 203
Query: 225 DLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLL--------CACTSPMA 276
+ VS+ A+I A EA+ +FR M G+ DS+ ++L C S +
Sbjct: 204 NEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIY 263
Query: 277 LNQ-GMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWN--- 332
N+ G QIH +++GF ++ L NSLL +Y K +++ A +F + + N+VSWN
Sbjct: 264 GNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPE-VNVVSWNIMI 322
Query: 333 --------------------------------AILSACLQHKQAGETFRLF--------- 351
++L AC + R+F
Sbjct: 323 VGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSIPQPSVS 382
Query: 352 ----------------------KQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFS 389
+QM F KP+ T++ +L +CA L LE G Q+H
Sbjct: 383 AWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVV 442
Query: 390 VKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENP-NVISWSSLIVGYAMSGLGHEA 448
+++ + + + +GLI +Y++C + ++ +FD N ++ W+S+I G+ + L +A
Sbjct: 443 IRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKA 502
Query: 449 LNLFRKMRNLGVR-PNEVTYVGVLSACS-----------HIGLVEEGWNLYNTMEEELG- 495
L LFR+M V PNE ++ VLS+CS H +V+ G+ + +E L
Sbjct: 503 LILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTD 562
Query: 496 -------IPPAREHFSC-----------MVDLLARAGCLYEAETFIRK---TGFDPDITT 534
I AR+ F M+ G EA RK +G PD T
Sbjct: 563 MYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGIT 622
Query: 535 WKTLLSSCKTHGNVDIAER---AAENILKLDPSNSAALVLLSSIHASAGNWEDVAKL 588
+ ++L++C G V+ + + I ++P + ++ + AG ED KL
Sbjct: 623 FVSVLTACSHSGLVETGLEILSSMQRIHGIEPELDHYICIVDCL-GRAGRLEDAEKL 678
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 332 bits (850), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 186/602 (30%), Positives = 329/602 (54%), Gaps = 13/602 (2%)
Query: 1 MYGKCGSMKD------ARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGF 54
MY C + D R+VFD M +NVV+W ++IS Y + G+ EA + M+R
Sbjct: 151 MYVSCLNAPDCFEYDVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEV 210
Query: 55 FPDQLTFGSIIKACCIAGDIYLGRQLHAHVIKSG--FGGHLVAQNGLISMYTNFGQVAHA 112
P ++F ++ A I+ I + ++K G + L + ISMY G + +
Sbjct: 211 KPSPVSFVNVFPAVSISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESS 270
Query: 113 SDVFTMISIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSS 172
VF +++ W++MI + Q +E++ LF + + +E SA S+
Sbjct: 271 RRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSA 330
Query: 173 LLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAI 232
L + E GRQ HG +K + SL MY++CG + + F + D+VSWN +
Sbjct: 331 LQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTM 390
Query: 233 IAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGF 292
I+AF +G +E + + +M G D IT +LL A ++ G Q H+++++ G
Sbjct: 391 ISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGI 450
Query: 293 NKEVALYNSLLTMYTKCSNLHDALSVFEAIS-KNANLVSWNAILSACLQHKQAGETFRLF 351
E + + L+ MY+K + + +FE + +WN+++S Q+ +TF +F
Sbjct: 451 QFE-GMNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVF 509
Query: 352 KQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKC 411
++ML +PN +T+ ++L C+++ S+++G Q+H FS++ L +V V++ L+DMY+K
Sbjct: 510 RKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKA 569
Query: 412 GSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVL 471
G++ +A+ +F T+ N ++++++I+GY G+G A++LF M+ G++P+ +T+V VL
Sbjct: 570 GAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVL 629
Query: 472 SACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPD 531
SACS+ GL++EG ++ M E I P+ EH+ C+ D+L R G + EA F++ G + +
Sbjct: 630 SACSYSGLIDEGLKIFEEMREVYNIQPSSEHYCCITDMLGRVGRVNEAYEFVKGLGEEGN 689
Query: 532 ITT-WKTLLSSCKTHGNVDIAERAAENILKLDPSN--SAALVLLSSIHASAGNWEDVAKL 588
I W +LL SCK HG +++AE +E + K D S VLLS+++A W+ V K+
Sbjct: 690 IAELWGSLLGSCKLHGELELAETVSERLAKFDKGKNFSGYEVLLSNMYAEEQKWKSVDKV 749
Query: 589 RK 590
R+
Sbjct: 750 RR 751
Score = 227 bits (579), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 158/580 (27%), Positives = 293/580 (50%), Gaps = 37/580 (6%)
Query: 6 GSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFP--DQLTFGS 63
G+ + ARQ+FDA+ V W ++I G+ N +EA++ Y +M ++ F D T+ S
Sbjct: 53 GNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSS 112
Query: 64 IIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASD--------- 114
+KAC ++ G+ +H H+I+ V N L++MY + +A D
Sbjct: 113 TLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVS---CLNAPDCFEYDVVRK 169
Query: 115 VFTMISIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLL 174
VF + K++++W+++I + + G EA F M+R V +P+ +VF A S
Sbjct: 170 VFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEV-KPSPVSFVNVFPAVSISR 228
Query: 175 EPEYGRQIHGICAKFG--LVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAI 232
+ +G+ K G V+++F S MYA+ G + S++ F ++ WN +
Sbjct: 229 SIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTM 288
Query: 233 IAAFADSGDANEAISIFRQMM-HIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVG 291
I + + E+I +F + + ++ D +T+L A ++ + G Q H ++ K
Sbjct: 289 IGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNF 348
Query: 292 FNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLF 351
+ + NSL+ MY++C ++H + VF ++ + ++VSWN ++SA +Q+ E L
Sbjct: 349 RELPIVIVNSLMVMYSRCGSVHKSFGVFLSM-RERDVVSWNTMISAFVQNGLDDEGLMLV 407
Query: 352 KQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKC 411
+M K + IT+T LL + L + E+G Q H F ++ G+ + +++ LIDMY+K
Sbjct: 408 YEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFE-GMNSYLIDMYSKS 466
Query: 412 GSVIHAQRVFDST--ENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVG 469
G + +Q++F+ + + +W+S+I GY +G + +FRKM +RPN VT
Sbjct: 467 GLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVAS 526
Query: 470 VLSACSHIGLVE-----EGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIR 524
+L ACS IG V+ G+++ +++ + + S +VD+ ++AG + AE
Sbjct: 527 ILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVA------SALVDMYSKAGAIKYAEDMFS 580
Query: 525 KTGFDPDITTWKTLLSSCKTHGNVDIAERAAENILKLDPS 564
+T + + T+ T++ HG + ERA L + S
Sbjct: 581 QTK-ERNSVTYTTMILGYGQHG---MGERAISLFLSMQES 616
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 331 bits (849), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 197/597 (32%), Positives = 321/597 (53%), Gaps = 5/597 (0%)
Query: 1 MYGKCGSMKDARQVFDAMHLR-NVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQL 59
MY K G DA +VF + + NVV W MI G+ +G ++ +Y+ +
Sbjct: 214 MYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVST 273
Query: 60 TFGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMI 119
+F + AC + + GRQ+H V+K G L+SMY+ G V A VF+ +
Sbjct: 274 SFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCV 333
Query: 120 SIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYG 179
K L W++M+ + + Y AL LF +RQ P+ F L +V S CS L YG
Sbjct: 334 VDKRLEIWNAMVAAYAENDYGYSALDLF-GFMRQKSVLPDSFTLSNVISCCSVLGLYNYG 392
Query: 180 RQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADS 239
+ +H K + +L +Y+KCG P A F +E D+V+W ++I+ +
Sbjct: 393 KSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKN 452
Query: 240 GDANEAISIFRQMMHI--GLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVA 297
G EA+ +F M L PDS S+ AC AL G+Q+H ++K G V
Sbjct: 453 GKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVF 512
Query: 298 LYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFS 357
+ +SL+ +Y+KC AL VF ++S N+V+WN+++S ++ + LF ML
Sbjct: 513 VGSSLIDLYSKCGLPEMALKVFTSMS-TENMVAWNSMISCYSRNNLPELSIDLFNLMLSQ 571
Query: 358 ENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHA 417
P+ ++IT++L + ASL G +H ++++ G+ D + N LIDMY KCG +A
Sbjct: 572 GIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYA 631
Query: 418 QRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHI 477
+ +F ++ ++I+W+ +I GY G AL+LF +M+ G P++VT++ ++SAC+H
Sbjct: 632 ENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHS 691
Query: 478 GLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKT 537
G VEEG N++ M+++ GI P EH++ MVDLL RAG L EA +FI+ + D + W
Sbjct: 692 GFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLC 751
Query: 538 LLSSCKTHGNVDIAERAAENILKLDPSNSAALVLLSSIHASAGNWEDVAKLRKVLDD 594
LLS+ +TH NV++ +AE +L+++P + V L +++ AG + AKL ++ +
Sbjct: 752 LLSASRTHHNVELGILSAEKLLRMEPERGSTYVQLINLYMEAGLKNEAAKLLGLMKE 808
Score = 249 bits (636), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 174/593 (29%), Positives = 293/593 (49%), Gaps = 18/593 (3%)
Query: 1 MYGKCGSMKDARQVFDA-------MHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSG 53
MY KCG + A QVFD + R+V W SMI GY + + E V + +ML G
Sbjct: 104 MYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFG 163
Query: 54 FFPDQLTFGSIIKACCIAGDIYL--GRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAH 111
PD + ++ C G+ G+Q+H ++++ + LI MY FG
Sbjct: 164 VRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSID 223
Query: 112 ASDVFTMISIK-DLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSAC 170
A VF I K +++ W+ MI GF G +L L+ V + G++ AC
Sbjct: 224 AWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGAL-GAC 282
Query: 171 SSLLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWN 230
S +GRQIH K GL + + SL MY+KCG + A+T F + L WN
Sbjct: 283 SQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWN 342
Query: 231 AIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKV 290
A++AA+A++ A+ +F M ++PDS T +++ C+ N G +H+ + K
Sbjct: 343 AMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKR 402
Query: 291 GFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRL 350
+ ++LLT+Y+KC DA VF+++ + ++V+W +++S ++ + E ++
Sbjct: 403 PIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEK-DMVAWGSLISGLCKNGKFKEALKV 461
Query: 351 FKQMLFSEN--KPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMY 408
F M ++ KP+ +T++ CA L +L G QVH +K+GLVL+V V + LID+Y
Sbjct: 462 FGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLY 521
Query: 409 AKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYV 468
+KCG A +VF S N+++W+S+I Y+ + L +++LF M + G+ P+ V+
Sbjct: 522 SKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSIT 581
Query: 469 GVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGF 528
VL A S + +G +L+ LGIP + ++D+ + G AE +K
Sbjct: 582 SVLVAISSTASLLKGKSLHG-YTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQ- 639
Query: 529 DPDITTWKTLLSSCKTHGNVDIAERAAENILKL--DPSNSAALVLLSSIHASA 579
+ TW ++ +HG+ A + + K P + L L+S+ + S
Sbjct: 640 HKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSG 692
Score = 183 bits (465), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 147/537 (27%), Positives = 254/537 (47%), Gaps = 18/537 (3%)
Query: 25 SWTSMISGYSQNGQGNEAVVMYIQML-RSGFFPDQLTFGSIIKACCIAGDIYLGRQLHAH 83
S S I Q G+ +A+ +Y + S F+ TF S++KAC ++ G+ +H
Sbjct: 26 SINSGIRALIQKGEYLQALHLYSKHDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGS 85
Query: 84 VIKSGFGGHLVAQNGLISMYTNFGQVAHASDVF-------TMISIKDLISWSSMIRGFTQ 136
V+ G+ L++MY G + +A VF + +S +D+ W+SMI G+ +
Sbjct: 86 VVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFK 145
Query: 137 LGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSL--LEPEYGRQIHGICAKFGLVRN 194
E + FR ML GV +P+ F L V S E G+QIHG + L +
Sbjct: 146 FRRFKEGVGCFRRMLVFGV-RPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTD 204
Query: 195 VFSGCSLCDMYAKCGFLPSAKTAFYQIESP-DLVSWNAIIAAFADSGDANEAISIFRQMM 253
F +L DMY K G A F +IE ++V WN +I F SG ++ ++
Sbjct: 205 SFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAK 264
Query: 254 HIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLH 313
+ + S +F L AC+ G QIH +VK+G + + + SLL+MY+KC +
Sbjct: 265 NNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVG 324
Query: 314 DALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTC 373
+A +VF + + L WNA+++A ++ LF M P+ T++N++ C
Sbjct: 325 EAETVFSCVV-DKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCC 383
Query: 374 AELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWS 433
+ L G VH K + ++ + L+ +Y+KCG A VF S E ++++W
Sbjct: 384 SVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWG 443
Query: 434 SLIVGYAMSGLGHEALNLFRKMR--NLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTME 491
SLI G +G EAL +F M+ + ++P+ V +AC+ + + G ++ +M
Sbjct: 444 SLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMI 503
Query: 492 EELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTLLSSCKTHGNV 548
+ G+ S ++DL ++ G L E + + ++ W +++ SC + N+
Sbjct: 504 KT-GLVLNVFVGSSLIDLYSKCG-LPEMALKVFTSMSTENMVAWNSMI-SCYSRNNL 557
Score = 177 bits (449), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 133/471 (28%), Positives = 220/471 (46%), Gaps = 24/471 (5%)
Query: 126 SWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGI 185
S +S IR Q G ++AL+L+ + + F S+ ACS+L YG+ IHG
Sbjct: 26 SINSGIRALIQKGEYLQALHLYSKHDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGS 85
Query: 186 CAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAF-------YQIESPDLVSWNAIIAAFAD 238
G + F SL +MY KCGFL A F + + D+ WN++I +
Sbjct: 86 VVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFK 145
Query: 239 SGDANEAISIFRQMMHIGLIPDSITF---LSLLCACTSPMALNQGMQIHSYIVKVGFNKE 295
E + FR+M+ G+ PD+ + +S++C +G QIH ++++ + +
Sbjct: 146 FRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCK-EGNFRREEGKQIHGFMLRNSLDTD 204
Query: 296 VALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQML 355
L +L+ MY K DA VF I +N+V WN ++ + L+ ML
Sbjct: 205 SFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLY--ML 262
Query: 356 FSENKPNMI--TITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGS 413
N ++ + T LG C++ + G Q+HC VK GL D V L+ MY+KCG
Sbjct: 263 AKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGM 322
Query: 414 VIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSA 473
V A+ VF + + W++++ YA + G+ AL+LF MR V P+ T V+S
Sbjct: 323 VGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISC 382
Query: 474 CSHIGLVEEGWNLYNTMEEELGIPPAREHF---SCMVDLLARAGCLYEAETFIRKTGFDP 530
CS +GL +N ++ EL P + S ++ L ++ GC +A + K+ +
Sbjct: 383 CSVLGL----YNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDA-YLVFKSMEEK 437
Query: 531 DITTWKTLLSSCKTHGNVDIAERAAENILKLDPS-NSAALVLLSSIHASAG 580
D+ W +L+S +G A + ++ D S + ++ S +A AG
Sbjct: 438 DMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAG 488
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 330 bits (847), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 181/588 (30%), Positives = 312/588 (53%), Gaps = 6/588 (1%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
+Y K G + AR+VF+ M R+VV WT+MI YS+ G EA + +M G P +T
Sbjct: 90 LYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVT 149
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMIS 120
++ +I + LH + GF + N ++++Y V A D+F +
Sbjct: 150 LLEMLSGVL---EITQLQCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQME 206
Query: 121 IKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGR 180
+D++SW++MI G+ +G E L L M G+ +P++ G+ S ++ + E GR
Sbjct: 207 QRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGL-RPDQQTFGASLSVSGTMCDLEMGR 265
Query: 181 QIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSG 240
+H K G ++ +L MY KCG ++ I + D+V W +I+ G
Sbjct: 266 MLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLG 325
Query: 241 DANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYN 300
A +A+ +F +M+ G S S++ +C + + G +H Y+++ G+ + N
Sbjct: 326 RAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALN 385
Query: 301 SLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSE-N 359
SL+TMY KC +L +L +FE +++ +LVSWNAI+S Q+ + LF++M F
Sbjct: 386 SLITMYAKCGHLDKSLVIFERMNER-DLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQ 444
Query: 360 KPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQR 419
+ + T+ +LL C+ +L VG +HC ++S + V L+DMY+KCG + AQR
Sbjct: 445 QVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQR 504
Query: 420 VFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGL 479
FDS +V+SW LI GY G G AL ++ + + G+ PN V ++ VLS+CSH G+
Sbjct: 505 CFDSISWKDVVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGM 564
Query: 480 VEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTLL 539
V++G ++++M + G+ P EH +C+VDLL RA + +A F ++ P I +L
Sbjct: 565 VQQGLKIFSSMVRDFGVEPNHEHLACVVDLLCRAKRIEDAFKFYKENFTRPSIDVLGIIL 624
Query: 540 SSCKTHGNVDIAERAAENILKLDPSNSAALVLLSSIHASAGNWEDVAK 587
+C+ +G ++ + E++++L P ++ V L A+ W+DV++
Sbjct: 625 DACRANGKTEVEDIICEDMIELKPGDAGHYVKLGHSFAAMKRWDDVSE 672
Score = 249 bits (635), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 162/552 (29%), Positives = 280/552 (50%), Gaps = 10/552 (1%)
Query: 26 WTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTFGSIIKACCIAGDIYLGRQLHAHVI 85
+ S I+ S +G + + + ML + PD TF S++KAC + G +H V+
Sbjct: 14 FNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVL 73
Query: 86 KSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIKDLISWSSMIRGFTQLGYEIEALY 145
+GF + L+++Y FG +AHA VF + +D++ W++MI +++ G EA
Sbjct: 74 VNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACS 133
Query: 146 LFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMY 205
L +M QG+ +P L + S +LE + +H +G ++ S+ ++Y
Sbjct: 134 LVNEMRFQGI-KPGPVTLLEMLSG---VLEITQLQCLHDFAVIYGFDCDIAVMNSMLNLY 189
Query: 206 AKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFL 265
KC + AK F Q+E D+VSWN +I+ +A G+ +E + + +M GL PD TF
Sbjct: 190 CKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFG 249
Query: 266 SLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKN 325
+ L + L G +H IVK GF+ ++ L +L+TMY KC + V E I N
Sbjct: 250 ASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETI-PN 308
Query: 326 ANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQV 385
++V W ++S ++ +A + +F +ML S + + I +++ +CA+L S ++G V
Sbjct: 309 KDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASV 368
Query: 386 HCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLG 445
H + ++ G LD N LI MYAKCG + + +F+ +++SW+++I GYA +
Sbjct: 369 HGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDL 428
Query: 446 HEALNLFRKMRNLGVRP-NEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFS 504
+AL LF +M+ V+ + T V +L ACS G + G L + + I P +
Sbjct: 429 CKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVG-KLIHCIVIRSFIRPCSLVDT 487
Query: 505 CMVDLLARAGCLYEAETFIRKTGFDPDITTWKTLLSSCKTHGNVDIAERAAENILK--LD 562
+VD+ ++ G L A+ + D+ +W L++ HG DIA L ++
Sbjct: 488 ALVDMYSKCGYLEAAQRCFDSISW-KDVVSWGILIAGYGFHGKGDIALEIYSEFLHSGME 546
Query: 563 PSNSAALVLLSS 574
P++ L +LSS
Sbjct: 547 PNHVIFLAVLSS 558
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 329 bits (844), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 180/544 (33%), Positives = 303/544 (55%), Gaps = 7/544 (1%)
Query: 55 FP-DQLTFGSIIKACCIAGDIYLGRQLHAHVI---KSGFGGHLVAQNGLISMYTNFGQVA 110
FP D+L ++K C + + +G +HAH+I +S N LI++Y +
Sbjct: 29 FPIDRLN--ELLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETV 86
Query: 111 HASDVFTMISIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSAC 170
A +F ++ ++++SW +M++G+ G++ E L LF+ M G +PNEFV VF +C
Sbjct: 87 RARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSC 146
Query: 171 SSLLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWN 230
S+ E G+Q HG K+GL+ + F +L MY+ C A + DL ++
Sbjct: 147 SNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFS 206
Query: 231 AIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKV 290
+ ++ + + G E + + R+ + + +++T+LS L ++ LN +Q+HS +V+
Sbjct: 207 SALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRF 266
Query: 291 GFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRL 350
GFN EV +L+ MY KC + A VF+ + N+ I+ A Q K E L
Sbjct: 267 GFNAEVEACGALINMYGKCGKVLYAQRVFDD-THAQNIFLNTTIMDAYFQDKSFEEALNL 325
Query: 351 FKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAK 410
F +M E PN T LL + AEL+ L+ G+ +H +KSG V V N L++MYAK
Sbjct: 326 FSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAK 385
Query: 411 CGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGV 470
GS+ A++ F ++++W+++I G + GLG EAL F +M G PN +T++GV
Sbjct: 386 SGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGV 445
Query: 471 LSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDP 530
L ACSHIG VE+G + +N + ++ + P +H++C+V LL++AG +AE F+R +
Sbjct: 446 LQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIEW 505
Query: 531 DITTWKTLLSSCKTHGNVDIAERAAENILKLDPSNSAALVLLSSIHASAGNWEDVAKLRK 590
D+ W+TLL++C N + ++ AE ++ P++S VLLS+IHA + WE VAK+R
Sbjct: 506 DVVAWRTLLNACYVRRNYRLGKKVAEYAIEKYPNDSGVYVLLSNIHAKSREWEGVAKVRS 565
Query: 591 VLDD 594
++++
Sbjct: 566 LMNN 569
Score = 172 bits (435), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 120/441 (27%), Positives = 206/441 (46%), Gaps = 9/441 (2%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSG-FFPDQL 59
+Y KC AR++FD M RNVVSW +M+ GY +G E + ++ M SG P++
Sbjct: 78 LYVKCRETVRARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEF 137
Query: 60 TFGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMI 119
+ K+C +G I G+Q H +K G H +N L+ MY+ A V +
Sbjct: 138 VATVVFKSCSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDL 197
Query: 120 SIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYG 179
DL +SS + G+ + G E L + R + N L S+ S+L +
Sbjct: 198 PYCDLSVFSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSL-RLFSNLRDLNLA 256
Query: 180 RQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADS 239
Q+H +FG V + +L +MY KCG + A+ F + ++ I+ A+
Sbjct: 257 LQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQD 316
Query: 240 GDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALY 299
EA+++F +M + P+ TF LL + L QG +H ++K G+ V +
Sbjct: 317 KSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVG 376
Query: 300 NSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSEN 359
N+L+ MY K ++ DA F ++ ++V+WN ++S C H E F +M+F+
Sbjct: 377 NALVNMYAKSGSIEDARKAFSGMTFR-DIVTWNTMISGCSHHGLGREALEAFDRMIFTGE 435
Query: 360 KPNMITITNLLGTCAELASLEVGNQVHCFS---VKSGLVLDVSVSNGLIDMYAKCGSVIH 416
PN IT +L C+ + +E G +H F+ K + D+ ++ + +K G
Sbjct: 436 IPNRITFIGVLQACSHIGFVEQG--LHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKD 493
Query: 417 AQRVFDSTE-NPNVISWSSLI 436
A+ + +V++W +L+
Sbjct: 494 AEDFMRTAPIEWDVVAWRTLL 514
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 94/355 (26%), Positives = 175/355 (49%), Gaps = 6/355 (1%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
MY C +A +V D + ++ ++S +SGY + G E + + + F + LT
Sbjct: 180 MYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLT 239
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMIS 120
+ S ++ D+ L Q+H+ +++ GF + A LI+MY G+V +A VF
Sbjct: 240 YLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTH 299
Query: 121 IKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGR 180
+++ ++++ + Q EAL LF M + V PNE+ + ++ + L + G
Sbjct: 300 AQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKEV-PPNEYTFAILLNSIAELSLLKQGD 358
Query: 181 QIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSG 240
+HG+ K G +V G +L +MYAK G + A+ AF + D+V+WN +I+ + G
Sbjct: 359 LLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHG 418
Query: 241 DANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIV-KVGFNKEVALY 299
EA+ F +M+ G IP+ ITF+ +L AC+ + QG+ + ++ K ++ Y
Sbjct: 419 LGREALEAFDRMIFTGEIPNRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHY 478
Query: 300 NSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQM 354
++ + +K DA ++V+W +L+AC + +RL K++
Sbjct: 479 TCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRTLLNACYVRR----NYRLGKKV 529
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 329 bits (843), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 189/597 (31%), Positives = 319/597 (53%), Gaps = 5/597 (0%)
Query: 2 YGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTF 61
Y K G + A +FD M R+ VSW +MISGY+ G+ +A ++ M RSG D +F
Sbjct: 45 YIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMKRSGSDVDGYSF 104
Query: 62 GSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISI 121
++K LG Q+H VIK G+ ++ + L+ MY +V A + F IS
Sbjct: 105 SRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEISE 164
Query: 122 KDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQ 181
+ +SW+++I GF Q+ A +L M + + + + + +Q
Sbjct: 165 PNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMFCNLLKQ 224
Query: 182 IHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIE-SPDLVSWNAIIAAFADSG 240
+H K GL + ++ YA CG + AK F + S DL+SWN++IA F+
Sbjct: 225 VHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHE 284
Query: 241 DANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYN 300
A +F QM + D T+ LL AC+ G +H ++K G + + N
Sbjct: 285 LKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATN 344
Query: 301 SLLTMYTK--CSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSE 358
+L++MY + + DALS+FE++ K+ +L+SWN+I++ Q + + + F + SE
Sbjct: 345 ALISMYIQFPTGTMEDALSLFESL-KSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSE 403
Query: 359 NKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQ 418
K + + LL +C++LA+L++G Q+H + KSG V + V + LI MY+KCG + A+
Sbjct: 404 IKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESAR 463
Query: 419 RVFDS-TENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHI 477
+ F + + ++W+++I+GYA GLG +L+LF +M N V+ + VT+ +L+ACSH
Sbjct: 464 KCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHT 523
Query: 478 GLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKT 537
GL++EG L N ME I P EH++ VDLL RAG + +A+ I +PD KT
Sbjct: 524 GLIQEGLELLNLMEPVYKIQPRMEHYAAAVDLLGRAGLVNKAKELIESMPLNPDPMVLKT 583
Query: 538 LLSSCKTHGNVDIAERAAENILKLDPSNSAALVLLSSIHASAGNWEDVAKLRKVLDD 594
L C+ G +++A + A ++L+++P + V LS +++ WE+ A ++K++ +
Sbjct: 584 FLGVCRACGEIEMATQVANHLLEIEPEDHFTYVSLSHMYSDLKKWEEKASVKKMMKE 640
Score = 223 bits (568), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 137/497 (27%), Positives = 246/497 (49%), Gaps = 9/497 (1%)
Query: 81 HAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIKDLISWSSMIRGFTQLGYE 140
H + IK G + N ++ Y FG + +A+ +F + +D +SW++MI G+T G
Sbjct: 23 HCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKL 82
Query: 141 IEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFSGCS 200
+A LF M R G + + + +S+ + G Q+HG+ K G NV+ G S
Sbjct: 83 EDAWCLFTCMKRSGS-DVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSS 141
Query: 201 LCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQM-MHIGLIP 259
L DMYAKC + A AF +I P+ VSWNA+IA F D A + M M +
Sbjct: 142 LVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTM 201
Query: 260 DSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVF 319
D+ TF LL PM N Q+H+ ++K+G E+ + N++++ Y C ++ DA VF
Sbjct: 202 DAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVF 261
Query: 320 EAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASL 379
+ + + +L+SWN++++ +H+ F LF QM + ++ T T LL C+
Sbjct: 262 DGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQ 321
Query: 380 EVGNQVHCFSVKSGLVLDVSVSNGLIDMYAK--CGSVIHAQRVFDSTENPNVISWSSLIV 437
G +H +K GL S +N LI MY + G++ A +F+S ++ ++ISW+S+I
Sbjct: 322 IFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIIT 381
Query: 438 GYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIP 497
G+A GL +A+ F +R+ ++ ++ + +L +CS + ++ G ++ + + G
Sbjct: 382 GFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIH-ALATKSGFV 440
Query: 498 PAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTLLSSCKTHG----NVDIAER 553
S ++ + ++ G + A ++ W ++ HG ++D+ +
Sbjct: 441 SNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQ 500
Query: 554 AAENILKLDPSNSAALV 570
+KLD A++
Sbjct: 501 MCNQNVKLDHVTFTAIL 517
Score = 180 bits (456), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 119/386 (30%), Positives = 191/386 (49%), Gaps = 5/386 (1%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAV-VMYIQMLRSGFFPDQL 59
MY KC ++DA + F + N VSW ++I+G+ Q A ++ + +++ D
Sbjct: 145 MYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAG 204
Query: 60 TFGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMI 119
TF ++ L +Q+HA V+K G + N +IS Y + G V+ A VF +
Sbjct: 205 TFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGL 264
Query: 120 -SIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEY 178
KDLISW+SMI GF++ + A LF M R V + + + + SACS +
Sbjct: 265 GGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWV-ETDIYTYTGLLSACSGEEHQIF 323
Query: 179 GRQIHGICAKFGLVRNVFSGCSLCDMYAK--CGFLPSAKTAFYQIESPDLVSWNAIIAAF 236
G+ +HG+ K GL + + +L MY + G + A + F ++S DL+SWN+II F
Sbjct: 324 GKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGF 383
Query: 237 ADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEV 296
A G + +A+ F + + D F +LL +C+ L G QIH+ K GF
Sbjct: 384 AQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNE 443
Query: 297 ALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLF 356
+ +SL+ MY+KC + A F+ IS + V+WNA++ QH + LF QM
Sbjct: 444 FVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCN 503
Query: 357 SENKPNMITITNLLGTCAELASLEVG 382
K + +T T +L C+ ++ G
Sbjct: 504 QNVKLDHVTFTAILTACSHTGLIQEG 529
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 78/157 (49%), Gaps = 4/157 (2%)
Query: 385 VHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGL 444
HC+++K G + D+ VSN ++D Y K G + +A +FD + +SW+++I GY G
Sbjct: 22 THCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGK 81
Query: 445 GHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFS 504
+A LF M+ G + ++ +L + + + G ++ + + G S
Sbjct: 82 LEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKG-GYECNVYVGS 140
Query: 505 CMVDLLARAGCLYEA-ETFIRKTGFDPDITTWKTLLS 540
+VD+ A+ + +A E F K +P+ +W L++
Sbjct: 141 SLVDMYAKCERVEDAFEAF--KEISEPNSVSWNALIA 175
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 327 bits (838), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 184/584 (31%), Positives = 298/584 (51%), Gaps = 70/584 (11%)
Query: 79 QLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIKDLISWSSMIRGFTQLG 138
Q HA ++KSG LI+ Y+N+ A V I + S+SS+I T+
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAK 95
Query: 139 YEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFSG 198
+++ +F M G+ P+ VL ++F C+ L + G+QIH + GL + F
Sbjct: 96 LFTQSIGVFSRMFSHGLI-PDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQ 154
Query: 199 CSLCDMYAKCGFLPSAKTAFYQIESPD--------------------------------- 225
S+ MY +CG + A+ F ++ D
Sbjct: 155 GSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIE 214
Query: 226 --LVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQI 283
+VSWN I++ F SG EA+ +F+++ H+G PD +T S+L + LN G I
Sbjct: 215 ANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLI 274
Query: 284 HSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFE---------------AISKNA-- 326
H Y++K G K+ + ++++ MY K +++ +S+F +S+N
Sbjct: 275 HGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLV 334
Query: 327 -----------------NLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNL 369
N+VSW +I++ C Q+ + E LF++M + KPN +TI ++
Sbjct: 335 DKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSM 394
Query: 370 LGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNV 429
L C +A+L G H F+V+ L+ +V V + LIDMYAKCG + +Q VF+ N+
Sbjct: 395 LPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNL 454
Query: 430 ISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNT 489
+ W+SL+ G++M G E +++F + ++P+ +++ +LSAC +GL +EGW +
Sbjct: 455 VCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKM 514
Query: 490 MEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTLLSSCKTHGNVD 549
M EE GI P EH+SCMV+LL RAG L EA I++ F+PD W LL+SC+ NVD
Sbjct: 515 MSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVD 574
Query: 550 IAERAAENILKLDPSNSAALVLLSSIHASAGNWEDVAKLRKVLD 593
+AE AAE + L+P N VLLS+I+A+ G W +V +R ++
Sbjct: 575 LAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKME 618
Score = 181 bits (459), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 118/412 (28%), Positives = 196/412 (47%), Gaps = 78/412 (18%)
Query: 1 MYGKCGSMKDARQVFDAMHLR-----------------------------------NVVS 25
MY +CG M DAR+VFD M + N+VS
Sbjct: 160 MYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVS 219
Query: 26 WTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTFGSIIKACCIAGDIYLGRQLHAHVI 85
W ++SG++++G EAVVM+ ++ GF PDQ+T S++ + + + +GR +H +VI
Sbjct: 220 WNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVI 279
Query: 86 KSGF----------------GGHLVAQNGLISMYTNF------------------GQVAH 111
K G GH+ G+IS++ F G V
Sbjct: 280 KQGLLKDKCVISAMIDMYGKSGHVY---GIISLFNQFEMMEAGVCNAYITGLSRNGLVDK 336
Query: 112 ASDVFTMISIK----DLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVF 167
A ++F + + +++SW+S+I G Q G +IEAL LFR+M GV +PN + S+
Sbjct: 337 ALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGV-KPNHVTIPSML 395
Query: 168 SACSSLLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLV 227
AC ++ +GR HG + L+ NV G +L DMYAKCG + ++ F + + +LV
Sbjct: 396 PACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLV 455
Query: 228 SWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYI 287
WN+++ F+ G A E +SIF +M L PD I+F SLL AC ++G + +
Sbjct: 456 CWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMM 515
Query: 288 V-KVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSAC 338
+ G + Y+ ++ + + L +A + + + + W A+L++C
Sbjct: 516 SEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSC 567
Score = 152 bits (383), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 115/507 (22%), Positives = 212/507 (41%), Gaps = 74/507 (14%)
Query: 2 YGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTF 61
Y DA V ++ + S++S+I ++ +++ ++ +M G PD
Sbjct: 60 YSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPDSHVL 119
Query: 62 GSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISI 121
++ K C +G+Q+H SG Q + MY G++ A VF +S
Sbjct: 120 PNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSD 179
Query: 122 KD-----------------------------------LISWSSMIRGFTQLGYEIEALYL 146
KD ++SW+ ++ GF + GY EA+ +
Sbjct: 180 KDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVM 239
Query: 147 FRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYA 206
F+ + G + P++ + SV + GR IHG K GL+++ ++ DMY
Sbjct: 240 FQKIHHLG-FCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYG 298
Query: 207 KCGFLPSAKTAFYQIE-----------------------------------SPDLVSWNA 231
K G + + F Q E ++VSW +
Sbjct: 299 KSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTS 358
Query: 232 IIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVG 291
IIA A +G EA+ +FR+M G+ P+ +T S+L AC + AL G H + V+V
Sbjct: 359 IIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVH 418
Query: 292 FNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLF 351
V + ++L+ MY KC ++ + VF + NLV WN++++ H +A E +F
Sbjct: 419 LLDNVHVGSALIDMYAKCGRINLSQIVFNMMP-TKNLVCWNSLMNGFSMHGKAKEVMSIF 477
Query: 352 KQMLFSENKPNMITITNLLGTCAELASLEVG-NQVHCFSVKSGLVLDVSVSNGLIDMYAK 410
+ ++ + KP+ I+ T+LL C ++ + G S + G+ + + ++++ +
Sbjct: 478 ESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGR 537
Query: 411 CGSVIHAQRVFDSTE-NPNVISWSSLI 436
G + A + P+ W +L+
Sbjct: 538 AGKLQEAYDLIKEMPFEPDSCVWGALL 564
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 124/244 (50%), Gaps = 2/244 (0%)
Query: 255 IGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHD 314
I IP SI + +L++ Q H+ I+K G + + L+ Y+ + +D
Sbjct: 9 IEKIPQSIVGFLESSSYHWSSSLSKTTQAHARILKSGAQNDGYISAKLIASYSNYNCFND 68
Query: 315 ALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCA 374
A V ++I + + S+++++ A + K ++ +F +M P+ + NL CA
Sbjct: 69 ADLVLQSIP-DPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCA 127
Query: 375 ELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSS 434
EL++ +VG Q+HC S SGL +D V + MY +CG + A++VFD + +V++ S+
Sbjct: 128 ELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSA 187
Query: 435 LIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEEL 494
L+ YA G E + + +M + G+ N V++ G+LS + G +E ++ + L
Sbjct: 188 LLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKI-HHL 246
Query: 495 GIPP 498
G P
Sbjct: 247 GFCP 250
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 327 bits (838), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 193/598 (32%), Positives = 334/598 (55%), Gaps = 18/598 (3%)
Query: 4 KCGSMKDARQVFDAMHLRNVVS-WTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTFG 62
K G ++ A +VFD M R+ V+ W +MI+G ++G +V ++ +M + G D+ F
Sbjct: 135 KLGDIEYAFEVFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFA 194
Query: 63 SIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVF--TMIS 120
+I+ + C G + G+Q+H+ VIK+GF N LI+MY N V A VF T ++
Sbjct: 195 TIL-SMCDYGSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVA 253
Query: 121 IKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGR 180
++D ++++ +I G + E+L +FR ML + +P + SV +CS G
Sbjct: 254 VRDQVTFNVVIDGLAGFKRD-ESLLVFRKMLEASL-RPTDLTFVSVMGSCSC---AAMGH 308
Query: 181 QIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSG 240
Q+HG+ K G + + MY+ +A F +E DLV+WN +I+++ +
Sbjct: 309 QVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAK 368
Query: 241 DANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYN 300
A+S++++M IG+ PD TF SLL + + L+ + + I+K G + ++ + N
Sbjct: 369 LGKSAMSVYKRMHIIGVKPDEFTFGSLL---ATSLDLDVLEMVQACIIKFGLSSKIEISN 425
Query: 301 SLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENK 360
+L++ Y+K + A +FE S NL+SWNAI+S + E F +L SE +
Sbjct: 426 ALISAYSKNGQIEKADLLFER-SLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVR 484
Query: 361 --PNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQ 418
P+ T++ LL C +SL +G+Q H + ++ G + + N LI+MY++CG++ ++
Sbjct: 485 ILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSL 544
Query: 419 RVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLG-VRPNEVTYVGVLSACSHI 477
VF+ +V+SW+SLI Y+ G G A+N ++ M++ G V P+ T+ VLSACSH
Sbjct: 545 EVFNQMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSACSHA 604
Query: 478 GLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIR--KTGFDPDITTW 535
GLVEEG ++N+M E G+ +HFSC+VDLL RAG L EAE+ ++ + + W
Sbjct: 605 GLVEEGLEIFNSMVEFHGVIRNVDHFSCLVDLLGRAGHLDEAESLVKISEKTIGSRVDVW 664
Query: 536 KTLLSSCKTHGNVDIAERAAENILKLDPSNSAALVLLSSIHASAGNWEDVAKLRKVLD 593
L S+C HG++ + + A+ +++ + + + V LS+I+A AG W++ + R+ ++
Sbjct: 665 WALFSACAAHGDLKLGKMVAKLLMEKEKDDPSVYVQLSNIYAGAGMWKEAEETRRAIN 722
Score = 180 bits (456), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 145/562 (25%), Positives = 260/562 (46%), Gaps = 65/562 (11%)
Query: 30 ISGYSQNGQGNEAVVMYIQMLR-SGFFPDQLTFGSIIKACCIAGDIYLGRQLHAHVIKSG 88
++G +++G+ A+ ++ + R + PDQ + I D G Q+H + I+SG
Sbjct: 28 LTGLTRSGENRNALKLFADVHRCTTLRPDQYSVSLAITTARHLRDTIFGGQVHCYAIRSG 87
Query: 89 FGGHLVAQNGLISMYTNFGQVAHASDVFTMISIKDLISWSS------------------- 129
H N L+S+Y G +A F I D+ SW++
Sbjct: 88 LLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDIEYAFEVFD 147
Query: 130 -------------MIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACS--SLL 174
MI G + GY ++ LFR+M + GV + ++F ++ S C SL
Sbjct: 148 KMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGV-RHDKFGFATILSMCDYGSL- 205
Query: 175 EPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESP--DLVSWNAI 232
++G+Q+H + K G +L MY C + A F + + D V++N +
Sbjct: 206 --DFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQVTFNVV 263
Query: 233 IAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGF 292
I A +E++ +FR+M+ L P +TF+S++ +C+ G Q+H +K G+
Sbjct: 264 IDGLA-GFKRDESLLVFRKMLEASLRPTDLTFVSVMGSCSCAA---MGHQVHGLAIKTGY 319
Query: 293 NKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFK 352
K + N+ +TMY+ + A VFE++ + +LV+WN ++S+ Q K ++K
Sbjct: 320 EKYTLVSNATMTMYSSFEDFGAAHKVFESLEEK-DLVTWNTMISSYNQAKLGKSAMSVYK 378
Query: 353 QMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCG 412
+M KP+ T +LL T +L LE+ V +K GL + +SN LI Y+K G
Sbjct: 379 RMHIIGVKPDEFTFGSLLATSLDLDVLEM---VQACIIKFGLSSKIEISNALISAYSKNG 435
Query: 413 SVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVR--PNEVTYVGV 470
+ A +F+ + N+ISW+++I G+ +G E L F + VR P+ T +
Sbjct: 436 QIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVRILPDAYTLSTL 495
Query: 471 LSACSH-----IGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEA-ETFIR 524
LS C +G + L + +E I A ++++ ++ G + + E F +
Sbjct: 496 LSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNA------LINMYSQCGTIQNSLEVFNQ 549
Query: 525 KTGFDPDITTWKTLLSSCKTHG 546
+ + D+ +W +L+S+ HG
Sbjct: 550 MS--EKDVVSWNSLISAYSRHG 569
Score = 172 bits (436), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 103/346 (29%), Positives = 183/346 (52%), Gaps = 8/346 (2%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
MY A +VF+++ +++V+W +MIS Y+Q G A+ +Y +M G PD+ T
Sbjct: 332 MYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFT 391
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMIS 120
FGS++ D+ + + A +IK G + N LIS Y+ GQ+ A +F
Sbjct: 392 FGSLLATSL---DLDVLEMVQACIIKFGLSSKIEISNALISAYSKNGQIEKADLLFERSL 448
Query: 121 IKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVY-QPNEFVLGSVFSACSSLLEPEYG 179
K+LISW+++I GF G+ E L F +L V P+ + L ++ S C S G
Sbjct: 449 RKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLG 508
Query: 180 RQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADS 239
Q H + G + G +L +MY++CG + ++ F Q+ D+VSWN++I+A++
Sbjct: 509 SQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRH 568
Query: 240 GDANEAISIFRQMMHIG-LIPDSITFLSLLCACTSPMALNQGMQIHSYIVKV-GFNKEVA 297
G+ A++ ++ M G +IPD+ TF ++L AC+ + +G++I + +V+ G + V
Sbjct: 569 GEGENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAGLVEEGLEIFNSMVEFHGVIRNVD 628
Query: 298 LYNSLLTMYTKCSNLHDALSVFEAISKN--ANLVSWNAILSACLQH 341
++ L+ + + +L +A S+ + K + + W A+ SAC H
Sbjct: 629 HFSCLVDLLGRAGHLDEAESLVKISEKTIGSRVDVWWALFSACAAH 674
Score = 166 bits (420), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 109/450 (24%), Positives = 221/450 (49%), Gaps = 43/450 (9%)
Query: 124 LISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIH 183
L++ + + G T+ G AL LF D+ R +P+++ + + L + +G Q+H
Sbjct: 21 LLNLNRRLTGLTRSGENRNALKLFADVHRCTTLRPDQYSVSLAITTARHLRDTIFGGQVH 80
Query: 184 GICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVS--------------- 228
+ GL+ + +L +Y + G L S K F +I+ PD+ S
Sbjct: 81 CYAIRSGLLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDIE 140
Query: 229 -----------------WNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCAC 271
WNA+I +SG ++ +FR+M +G+ D F ++L C
Sbjct: 141 YAFEVFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATILSMC 200
Query: 272 TSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNA-NLVS 330
+L+ G Q+HS ++K GF ++ N+L+TMY C + DA VFE + V+
Sbjct: 201 DYG-SLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQVT 259
Query: 331 WNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSV 390
+N ++ K+ E+ +F++ML + +P +T +++G+C+ A +G+QVH ++
Sbjct: 260 FNVVIDGLAGFKR-DESLLVFRKMLEASLRPTDLTFVSVMGSCSCAA---MGHQVHGLAI 315
Query: 391 KSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALN 450
K+G VSN + MY+ A +VF+S E ++++W+++I Y + LG A++
Sbjct: 316 KTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMS 375
Query: 451 LFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLL 510
++++M +GV+P+E T+ +L+ + ++E + + G+ E + ++
Sbjct: 376 VYKRMHIIGVKPDEFTFGSLLATSLDLDVLE----MVQACIIKFGLSSKIEISNALISAY 431
Query: 511 ARAGCLYEAETFIRKTGFDPDITTWKTLLS 540
++ G + +A+ ++ ++ +W ++S
Sbjct: 432 SKNGQIEKADLLFERS-LRKNLISWNAIIS 460
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 91/363 (25%), Positives = 159/363 (43%), Gaps = 61/363 (16%)
Query: 223 SPDLVSWNAIIAAFADSGDANEAISIFRQMMH-IGLIPDSITFLSLLCACTSPMALNQ-- 279
S L++ N + SG+ A+ +F + L PD S+ A T+ L
Sbjct: 18 STTLLNLNRRLTGLTRSGENRNALKLFADVHRCTTLRPDQ---YSVSLAITTARHLRDTI 74
Query: 280 -GMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHD------------------------ 314
G Q+H Y ++ G + N+LL++Y + NL
Sbjct: 75 FGGQVHCYAIRSGLLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASF 134
Query: 315 -------ALSVFEAISKNANLVSWNAILSACLQ---HKQAGETFRLFKQMLFSENKPNMI 364
A VF+ + + ++ WNA+++ C + H+ + E FR ++ +K
Sbjct: 135 KLGDIEYAFEVFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFA 194
Query: 365 TITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDST 424
TI L C + SL+ G QVH +K+G + SV N LI MY C V+ A VF+ T
Sbjct: 195 TI---LSMC-DYGSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEET 250
Query: 425 ENP--NVISWSSLIVGYAMSGLGH-EALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVE 481
+ + ++++ +I G A G E+L +FRKM +RP ++T+V V+ +CS +
Sbjct: 251 DVAVRDQVTFNVVIDGLA--GFKRDESLLVFRKMLEASLRPTDLTFVSVMGSCSCAAM-- 306
Query: 482 EGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYE---AETFIRKTGFDPDITTWKTL 538
G ++ L I E ++ + + +E A + ++ + D+ TW T+
Sbjct: 307 -GHQVHG-----LAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTM 360
Query: 539 LSS 541
+SS
Sbjct: 361 ISS 363
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 87/190 (45%), Gaps = 34/190 (17%)
Query: 321 AISKNAN-LVSWNAILSACLQHKQAGETFRLFKQMLFSEN-KPNMITITNLLGTCAELAS 378
AI++N+ L++ N L+ + + +LF + +P+ +++ + T L
Sbjct: 13 AIAENSTTLLNLNRRLTGLTRSGENRNALKLFADVHRCTTLRPDQYSVSLAITTARHLRD 72
Query: 379 LEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSL--- 435
G QVHC++++SGL+ VSN L+ +Y + G++ ++ FD + P+V SW++L
Sbjct: 73 TIFGGQVHCYAIRSGLLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSA 132
Query: 436 -----------------------------IVGYAMSGLGHEALNLFRKMRNLGVRPNEVT 466
I G SG ++ LFR+M LGVR ++
Sbjct: 133 SFKLGDIEYAFEVFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFG 192
Query: 467 YVGVLSACSH 476
+ +LS C +
Sbjct: 193 FATILSMCDY 202
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 327 bits (837), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 181/589 (30%), Positives = 302/589 (51%), Gaps = 33/589 (5%)
Query: 2 YGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTF 61
YGKCG + DAR++F+ M R+ SW ++I+ +QNG +E M+ +M R G + +F
Sbjct: 106 YGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSF 165
Query: 62 GSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISI 121
++K+C + D+ L RQLH V+K G+ G++ + ++ +Y ++ A VF I
Sbjct: 166 AGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVN 225
Query: 122 KDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQ 181
+SW+ ++R + ++G+ EA+ +F ML V +P + SV ACS L E G+
Sbjct: 226 PSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNV-RPLNHTVSSVMLACSRSLALEVGKV 284
Query: 182 IHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGD 241
IH I K +V + S+ DMY KC L SA+ F Q S DL SW + ++ +A SG
Sbjct: 285 IHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGL 344
Query: 242 ANEAISIFRQMMHIGLIP-------------------------------DSITFLSLLCA 270
EA +F M ++ D++T + +L
Sbjct: 345 TREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNV 404
Query: 271 CTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVS 330
C+ + G Q H +I + G++ V + N+LL MY KC L A F +S+ + VS
Sbjct: 405 CSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVS 464
Query: 331 WNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSV 390
WNA+L+ + ++ + F+ M E KP+ T+ LL CA + +L +G +H F +
Sbjct: 465 WNALLTGVARVGRSEQALSFFEGMQV-EAKPSKYTLATLLAGCANIPALNLGKAIHGFLI 523
Query: 391 KSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALN 450
+ G +DV + ++DMY+KC +A VF ++I W+S+I G +G E
Sbjct: 524 RDGYKIDVVIRGAMVDMYSKCRCFDYAIEVFKEAATRDLILWNSIIRGCCRNGRSKEVFE 583
Query: 451 LFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLL 510
LF + N GV+P+ VT++G+L AC G VE G+ +++M + I P EH+ CM++L
Sbjct: 584 LFMLLENEGVKPDHVTFLGILQACIREGHVELGFQYFSSMSTKYHISPQVEHYDCMIELY 643
Query: 511 ARAGCLYEAETFIRKTGFDPDITTWKTLLSSCKTHGNVDIAERAAENIL 559
+ GCL++ E F+ FDP + + +C+ + + AA+ ++
Sbjct: 644 CKYGCLHQLEEFLLLMPFDPPMQMLTRINDACQRYRWSKLGAWAAKRLM 692
Score = 205 bits (521), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 132/444 (29%), Positives = 210/444 (47%), Gaps = 34/444 (7%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
+YGKC M DAR+VFD + + VSW ++ Y + G +EAVVM+ +ML P T
Sbjct: 206 VYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHT 265
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMIS 120
S++ AC + + +G+ +HA +K V + MY ++ A VF
Sbjct: 266 VSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTR 325
Query: 121 IKDLISWSSMIRGFTQLGYEIEALYLFRDM------------------------------ 150
KDL SW+S + G+ G EA LF M
Sbjct: 326 SKDLKSWTSAMSGYAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTL 385
Query: 151 LRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGF 210
+RQ + + L + + CS + + + G+Q HG + G NV +L DMY KCG
Sbjct: 386 MRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGT 445
Query: 211 LPSAKTAFYQI-ESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLC 269
L SA F Q+ E D VSWNA++ A G + +A+S F + M + P T +LL
Sbjct: 446 LQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQALSFF-EGMQVEAKPSKYTLATLLA 504
Query: 270 ACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLV 329
C + ALN G IH ++++ G+ +V + +++ MY+KC A+ VF+ + +L+
Sbjct: 505 GCANIPALNLGKAIHGFLIRDGYKIDVVIRGAMVDMYSKCRCFDYAIEVFKE-AATRDLI 563
Query: 330 SWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQ-VHCF 388
WN+I+ C ++ ++ E F LF + KP+ +T +L C +E+G Q
Sbjct: 564 LWNSIIRGCCRNGRSKEVFELFMLLENEGVKPDHVTFLGILQACIREGHVELGFQYFSSM 623
Query: 389 SVKSGLVLDVSVSNGLIDMYAKCG 412
S K + V + +I++Y K G
Sbjct: 624 STKYHISPQVEHYDCMIELYCKYG 647
Score = 195 bits (495), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 134/519 (25%), Positives = 239/519 (46%), Gaps = 37/519 (7%)
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMIS 120
+ + ++C + R++ +H++ + N I Y G V A ++F +
Sbjct: 64 YERLFRSCSSKALVVQARKVQSHLVTFSPLPPIFLLNRAIEAYGKCGCVDDARELFEEMP 123
Query: 121 IKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGR 180
+D SW+++I Q G E +FR M R GV + E V +C +L+ R
Sbjct: 124 ERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGV-RATETSFAGVLKSCGLILDLRLLR 182
Query: 181 QIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSG 240
Q+H K+G NV S+ D+Y KC + A+ F +I +P VSWN I+ + + G
Sbjct: 183 QLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMG 242
Query: 241 DANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYN 300
+EA+ +F +M+ + + P + T S++ AC+ +AL G IH+ VK+ + +
Sbjct: 243 FNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVVST 302
Query: 301 SLLTMYTKCSNLHDALSVFE--------------------AISKNA----------NLVS 330
S+ MY KC L A VF+ +++ A N+VS
Sbjct: 303 SVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPERNIVS 362
Query: 331 WNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSV 390
WNA+L + + E M + +T+ +L C+ ++ +++G Q H F
Sbjct: 363 WNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFIY 422
Query: 391 KSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDS-TENPNVISWSSLIVGYAMSGLGHEAL 449
+ G +V V+N L+DMY KCG++ A F +E + +SW++L+ G A G +AL
Sbjct: 423 RHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQAL 482
Query: 450 NLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDL 509
+ F M+ + +P++ T +L+ C++I + G ++ + + G MVD+
Sbjct: 483 SFFEGMQ-VEAKPSKYTLATLLAGCANIPALNLGKAIHGFLIRD-GYKIDVVIRGAMVDM 540
Query: 510 LARAGCL-YEAETFIRKTGFDPDITTWKTLLSSCKTHGN 547
++ C Y E F K D+ W +++ C +G
Sbjct: 541 YSKCRCFDYAIEVF--KEAATRDLILWNSIIRGCCRNGR 577
Score = 169 bits (429), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 130/440 (29%), Positives = 205/440 (46%), Gaps = 34/440 (7%)
Query: 166 VFSACSSLLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPD 225
+F +CSS R++ F + +F + Y KCG + A+ F ++ D
Sbjct: 67 LFRSCSSKALVVQARKVQSHLVTFSPLPPIFLLNRAIEAYGKCGCVDDARELFEEMPERD 126
Query: 226 LVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHS 285
SWNA+I A A +G ++E +FR+M G+ +F +L +C + L Q+H
Sbjct: 127 GGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSCGLILDLRLLRQLHC 186
Query: 286 YIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAG 345
+VK G++ V L S++ +Y KC + DA VF+ I N + VSWN I+ L+
Sbjct: 187 AVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIV-NPSDVSWNVIVRRYLEMGFND 245
Query: 346 ETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLI 405
E +F +ML +P T+++++ C+ +LEVG +H +VK +V D VS +
Sbjct: 246 EAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVVSTSVF 305
Query: 406 DMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKM--RN------ 457
DMY KC + A+RVFD T + ++ SW+S + GYAMSGL EA LF M RN
Sbjct: 306 DMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPERNIVSWNA 365
Query: 458 -LG--VRPNE--------------------VTYVGVLSACSHIGLVEEGWNLYNTMEEEL 494
LG V +E VT V +L+ CS I V+ G + +
Sbjct: 366 MLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFIYRH- 424
Query: 495 GIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTLLSSCKTHGNVDIAERA 554
G + ++D+ + G L A + R+ D +W LL+ G + A
Sbjct: 425 GYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQALSF 484
Query: 555 AENI-LKLDPSNSAALVLLS 573
E + ++ PS LL+
Sbjct: 485 FEGMQVEAKPSKYTLATLLA 504
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 63/139 (45%)
Query: 339 LQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDV 398
L+H + G + + S + L +C+ A + +V V + +
Sbjct: 37 LEHLEGGNVSKAVSVLFASPEPVSYWLYERLFRSCSSKALVVQARKVQSHLVTFSPLPPI 96
Query: 399 SVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNL 458
+ N I+ Y KCG V A+ +F+ + SW+++I A +G+ E +FR+M
Sbjct: 97 FLLNRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRD 156
Query: 459 GVRPNEVTYVGVLSACSHI 477
GVR E ++ GVL +C I
Sbjct: 157 GVRATETSFAGVLKSCGLI 175
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 325 bits (833), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 194/601 (32%), Positives = 326/601 (54%), Gaps = 19/601 (3%)
Query: 2 YGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTF 61
Y KCG + + FD M+ R+ VSW ++ G G E + + ++ GF P+ T
Sbjct: 71 YMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGFEPNTSTL 130
Query: 62 GSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISI 121
+I AC + G ++H +VI+SGF G QN ++ MY + ++ A +F +S
Sbjct: 131 VLVIHAC--RSLWFDGEKIHGYVIRSGFCGISSVQNSILCMYADSDSLS-ARKLFDEMSE 187
Query: 122 KDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQ 181
+D+ISWS +IR + Q + L LF++M+ + +P+ + SV AC+ + + + GR
Sbjct: 188 RDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDVGRS 247
Query: 182 IHGICAKFGL-VRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSG 240
+HG + G + +VF SL DMY+K + SA F + ++VSWN+I+A F +
Sbjct: 248 VHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQ 307
Query: 241 DANEAISIFRQMMHIGLIPDSITFLSLLCACT---SPMALNQGMQIHSYIVKVGFNKEVA 297
+EA+ +F M+ + D +T +SLL C P+ IH I++ G+
Sbjct: 308 RYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKS---IHGVIIRRGYESNEV 364
Query: 298 LYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFS 357
+SL+ YT CS + DA +V ++++ ++VS + ++S ++ E +F M
Sbjct: 365 ALSSLIDAYTSCSLVDDAGTVLDSMTYK-DVVSCSTMISGLAHAGRSDEAISIFCHM--- 420
Query: 358 ENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVL-DVSVSNGLIDMYAKCGSVIH 416
+ PN IT+ +LL C+ A L H +++ L + D+SV ++D YAKCG++
Sbjct: 421 RDTPNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEM 480
Query: 417 AQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSH 476
A+R FD N+ISW+ +I YA++GL +AL LF +M+ G PN VTY+ LSAC+H
Sbjct: 481 ARRTFDQITEKNIISWTVIISAYAINGLPDKALALFDEMKQKGYTPNAVTYLAALSACNH 540
Query: 477 IGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFD--PDITT 534
GLV++G ++ +M EE P+ +H+SC+VD+L+RAG + A I+ D +
Sbjct: 541 GGLVKKGLMIFKSMVEE-DHKPSLQHYSCIVDMLSRAGEIDTAVELIKNLPEDVKAGASA 599
Query: 535 WKTLLSSCKTH-GNVDIAERAAENILKLDPSNSAALVLLSSIHASAGNWEDVAKLRKVLD 593
W +LS C+ + I +L+L+P S+ +L SS A+ +WEDVA +R+++
Sbjct: 600 WGAILSGCRNRFKKLIITSEVVAEVLELEPLCSSGYLLASSTFAAEKSWEDVAMMRRLVK 659
Query: 594 D 594
+
Sbjct: 660 E 660
Score = 179 bits (455), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 150/536 (27%), Positives = 252/536 (47%), Gaps = 47/536 (8%)
Query: 27 TSMISGYSQNGQGNEAVVMYIQMLRSGF-FPDQLTFGSIIKACCIAGDIYLGRQLHAHVI 85
+S I S +G+ E V Y ++ R+G F D F + KAC ++ G
Sbjct: 13 SSKIKQASVSGKWREVVSGYSEIQRAGVQFNDPFVFPIVFKACAKLSWLFQG-------- 64
Query: 86 KSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIKDLISWSSMIRGFTQLGYEIEALY 145
N + Y G + F ++ +D +SW+ ++ G G+E E L+
Sbjct: 65 -----------NSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLW 113
Query: 146 LFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFSGCS----- 200
F LR ++PN L V AC SL G +IHG ++R+ F G S
Sbjct: 114 WFSK-LRVWGFEPNTSTLVLVIHACRSLWFD--GEKIHGY-----VIRSGFCGISSVQNS 165
Query: 201 -LCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLI- 258
LC MYA L SA+ F ++ D++SW+ +I ++ S + + +F++M+H
Sbjct: 166 ILC-MYADSDSL-SARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTE 223
Query: 259 PDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFN-KEVALYNSLLTMYTKCSNLHDALS 317
PD +T S+L ACT ++ G +H + ++ GF+ +V + NSL+ MY+K ++ A
Sbjct: 224 PDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFR 283
Query: 318 VFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELA 377
VF+ + N+VSWN+IL+ + +++ E +F M+ + + +T+ +LL C
Sbjct: 284 VFDETTCR-NIVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFE 342
Query: 378 SLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIV 437
+H ++ G + + LID Y C V A V DS +V+S S++I
Sbjct: 343 QPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMIS 402
Query: 438 GYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACS-HIGLVEEGWNLYNTMEEELGI 496
G A +G EA+++F MR+ PN +T + +L+ACS L W + L I
Sbjct: 403 GLAHAGRSDEAISIFCHMRDT---PNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAI 459
Query: 497 PPAREHFSCMVDLLARAGCLYEA-ETFIRKTGFDPDITTWKTLLSSCKTHGNVDIA 551
S +VD A+ G + A TF + T + +I +W ++S+ +G D A
Sbjct: 460 NDISVGTS-IVDAYAKCGAIEMARRTFDQIT--EKNIISWTVIISAYAINGLPDKA 512
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 101/341 (29%), Positives = 179/341 (52%), Gaps = 7/341 (2%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
MY K + A +VFD RN+VSW S+++G+ N + +EA+ M+ M++ D++T
Sbjct: 271 MYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVT 330
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMIS 120
S+++ C + +H +I+ G+ + VA + LI YT+ V A V ++
Sbjct: 331 VVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMT 390
Query: 121 IKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGR 180
KD++S S+MI G G EA+ +F M PN + S+ +ACS + +
Sbjct: 391 YKDVVSCSTMISGLAHAGRSDEAISIFCHMRD----TPNAITVISLLNACSVSADLRTSK 446
Query: 181 QIHGICAKFGLVRNVFS-GCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADS 239
HGI + L N S G S+ D YAKCG + A+ F QI +++SW II+A+A +
Sbjct: 447 WAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAIN 506
Query: 240 GDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALY 299
G ++A+++F +M G P+++T+L+ L AC + +G+ I +V+ + Y
Sbjct: 507 GLPDKALALFDEMKQKGYTPNAVTYLAALSACNHGGLVKKGLMIFKSMVEEDHKPSLQHY 566
Query: 300 NSLLTMYTKCSNLHDALSVFEAISKN--ANLVSWNAILSAC 338
+ ++ M ++ + A+ + + + ++ A +W AILS C
Sbjct: 567 SCIVDMLSRAGEIDTAVELIKNLPEDVKAGASAWGAILSGC 607
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 322 bits (826), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 182/559 (32%), Positives = 296/559 (52%), Gaps = 9/559 (1%)
Query: 37 GQGNEAVVMYIQMLRSGFFPDQLTFGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQ 96
GQ EA+ + S + S+++ C G Q HAHV+KSG
Sbjct: 40 GQLTEAIRILNSTHSSEIPATPKLYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVG 99
Query: 97 NGLISMYTNFGQ-VAHASDVFTMISIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGV 155
N L+S+Y G + VF +KD ISW+SM+ G+ ++AL +F +M+ G+
Sbjct: 100 NSLLSLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGL 159
Query: 156 YQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAK 215
NEF L S ACS L E GR HG+ G N F +L +Y A+
Sbjct: 160 -DANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDAR 218
Query: 216 TAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMH-IGLIPDSITFLSLLCACTSP 274
F ++ PD++ W A+++AF+ + EA+ +F M GL+PD TF ++L AC +
Sbjct: 219 RVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNL 278
Query: 275 MALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAI 334
L QG +IH ++ G V + +SLL MY KC ++ +A VF +SK N VSW+A+
Sbjct: 279 RRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKK-NSVSWSAL 337
Query: 335 LSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGL 394
L Q+ + + +F++M + ++ +L CA LA++ +G ++H V+ G
Sbjct: 338 LGGYCQNGEHEKAIEIFREM----EEKDLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGC 393
Query: 395 VLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRK 454
+V V + LID+Y K G + A RV+ N+I+W++++ A +G G EA++ F
Sbjct: 394 FGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFND 453
Query: 455 MRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAG 514
M G++P+ ++++ +L+AC H G+V+EG N + M + GI P EH+SCM+DLL RAG
Sbjct: 454 MVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAG 513
Query: 515 CLYEAETFIRKTGFDPDITTWKTLLSSCKTHGNVD-IAERAAENILKLDPSNSAALVLLS 573
EAE + + D + W LL C + + +AER A+ +++L+P + VLLS
Sbjct: 514 LFEEAENLLERAECRNDASLWGVLLGPCAANADASRVAERIAKRMMELEPKYHMSYVLLS 573
Query: 574 SIHASAGNWEDVAKLRKVL 592
+++ + G D +RK++
Sbjct: 574 NMYKAIGRHGDALNIRKLM 592
Score = 204 bits (519), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 129/440 (29%), Positives = 219/440 (49%), Gaps = 7/440 (1%)
Query: 1 MYGKCG-SMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQL 59
+Y K G M++ R+VFD +++ +SWTSM+SGY + +A+ ++++M+ G ++
Sbjct: 105 LYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEF 164
Query: 60 TFGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMI 119
T S +KAC G++ LGR H VI GF + + L +Y + A VF +
Sbjct: 165 TLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEM 224
Query: 120 SIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYG 179
D+I W++++ F++ EAL LF M R P+ G+V +AC +L + G
Sbjct: 225 PEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQG 284
Query: 180 RQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADS 239
++IHG G+ NV SL DMY KCG + A+ F + + VSW+A++ + +
Sbjct: 285 KEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQN 344
Query: 240 GDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALY 299
G+ +AI IFR+M D F ++L AC A+ G +IH V+ G V +
Sbjct: 345 GEHEKAIEIFREMEE----KDLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVE 400
Query: 300 NSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSEN 359
++L+ +Y K + A V+ +S N+++WNA+LSA Q+ + E F M+
Sbjct: 401 SALIDLYGKSGCIDSASRVYSKMSIR-NMITWNAMLSALAQNGRGEEAVSFFNDMVKKGI 459
Query: 360 KPNMITITNLLGTCAELASLEVGNQVHCFSVKS-GLVLDVSVSNGLIDMYAKCGSVIHAQ 418
KP+ I+ +L C ++ G KS G+ + +ID+ + G A+
Sbjct: 460 KPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAE 519
Query: 419 RVFDSTENPNVISWSSLIVG 438
+ + E N S +++G
Sbjct: 520 NLLERAECRNDASLWGVLLG 539
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 91/322 (28%), Positives = 135/322 (41%), Gaps = 51/322 (15%)
Query: 313 HDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGT 372
H +L + +IS +A + IL C + Q E R+ SE +LL T
Sbjct: 13 HASLCLTPSISSSAP-TKQSRILELC-KLGQLTEAIRILNSTHSSEIPATPKLYASLLQT 70
Query: 373 CAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCG-SVIHAQRVFDSTENPNVIS 431
C ++ S G Q H VKSGL D +V N L+ +Y K G + +RVFD + IS
Sbjct: 71 CNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRETRRVFDGRFVKDAIS 130
Query: 432 WSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEG-------- 483
W+S++ GY +AL +F +M + G+ NE T + ACS +G V G
Sbjct: 131 WTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGRCFHGVVI 190
Query: 484 -----WN---------LYNTMEEELGIPPAREHFSCMV-----------------DLLAR 512
WN LY E + AR F M DL
Sbjct: 191 THGFEWNHFISSTLAYLYGVNREPV---DARRVFDEMPEPDVICWTAVLSAFSKNDLYEE 247
Query: 513 AGCLYEAETFIRKTGFDPDITTWKTLLSSCKTHGNVDIAERAAENILKLDPSN-SAALVL 571
A L+ A R G PD +T+ T+L++C GN+ ++ E KL + + +V+
Sbjct: 248 ALGLFYA--MHRGKGLVPDGSTFGTVLTAC---GNLRRLKQGKEIHGKLITNGIGSNVVV 302
Query: 572 LSSIHASAGNWEDVAKLRKVLD 593
SS+ G V + R+V +
Sbjct: 303 ESSLLDMYGKCGSVREARQVFN 324
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 318 bits (816), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 174/483 (36%), Positives = 275/483 (56%), Gaps = 15/483 (3%)
Query: 123 DLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQI 182
D+ SW+S+I + G EAL F M + +Y P ACSSL + G+Q
Sbjct: 40 DVFSWNSVIADLARSGDSAEALLAFSSMRKLSLY-PTRSSFPCAIKACSSLFDIFSGKQT 98
Query: 183 HGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDA 242
H FG ++F +L MY+ CG L A+ F +I ++VSW ++I + +G+A
Sbjct: 99 HQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNA 158
Query: 243 NEAISIFRQMM------HIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEV 296
+A+S+F+ ++ + DS+ +S++ AC+ A IHS+++K GF++ V
Sbjct: 159 LDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGV 218
Query: 297 ALYNSLLTMYTKCSN--LHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQM 354
++ N+LL Y K + A +F+ I + + VS+N+I+S Q + E F +F+++
Sbjct: 219 SVGNTLLDAYAKGGEGGVAVARKIFDQIV-DKDRVSYNSIMSVYAQSGMSNEAFEVFRRL 277
Query: 355 LFSENKP---NMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKC 411
+ +NK N IT++ +L + +L +G +H ++ GL DV V +IDMY KC
Sbjct: 278 V--KNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKC 335
Query: 412 GSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVL 471
G V A++ FD +N NV SW+++I GY M G +AL LF M + GVRPN +T+V VL
Sbjct: 336 GRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVL 395
Query: 472 SACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPD 531
+ACSH GL EGW +N M+ G+ P EH+ CMVDLL RAG L +A I++ PD
Sbjct: 396 AACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPD 455
Query: 532 ITTWKTLLSSCKTHGNVDIAERAAENILKLDPSNSAALVLLSSIHASAGNWEDVAKLRKV 591
W +LL++C+ H NV++AE + + +LD SN +LLS I+A AG W+DV ++R +
Sbjct: 456 SIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMI 515
Query: 592 LDD 594
+ +
Sbjct: 516 MKN 518
Score = 202 bits (513), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 128/428 (29%), Positives = 218/428 (50%), Gaps = 17/428 (3%)
Query: 22 NVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTFGSIIKACCIAGDIYLGRQLH 81
+V SW S+I+ +++G EA++ + M + +P + +F IKAC DI+ G+Q H
Sbjct: 40 DVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTH 99
Query: 82 AHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIKDLISWSSMIRGFTQLGYEI 141
G+ + + LI MY+ G++ A VF I ++++SW+SMIRG+ G +
Sbjct: 100 QQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNAL 159
Query: 142 EALYLFRDMLRQGVYQPNEFVLG-----SVFSACSSLLEPEYGRQIHGICAKFGLVRNVF 196
+A+ LF+D+L + L SV SACS + IH K G R V
Sbjct: 160 DAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVS 219
Query: 197 SGCSLCDMYAKCGF--LPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMH 254
G +L D YAK G + A+ F QI D VS+N+I++ +A SG +NEA +FR+++
Sbjct: 220 VGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVK 279
Query: 255 IGLIP-DSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLH 313
++ ++IT ++L A + AL G IH ++++G +V + S++ MY KC +
Sbjct: 280 NKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVE 339
Query: 314 DALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTC 373
A F+ + KN N+ SW A+++ H A + LF M+ S +PN IT ++L C
Sbjct: 340 TARKAFDRM-KNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAAC 398
Query: 374 AELA-SLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTE----NPN 428
+ +E + + G+ + ++D+ + G + Q+ +D + P+
Sbjct: 399 SHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFL---QKAYDLIQRMKMKPD 455
Query: 429 VISWSSLI 436
I WSSL+
Sbjct: 456 SIIWSSLL 463
Score = 186 bits (471), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 111/352 (31%), Positives = 182/352 (51%), Gaps = 9/352 (2%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQML------RSGF 54
MY CG ++DAR+VFD + RN+VSWTSMI GY NG +AV ++ +L
Sbjct: 120 MYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAM 179
Query: 55 FPDQLTFGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQ--VAHA 112
F D + S+I AC L +H+ VIK GF + N L+ Y G+ VA A
Sbjct: 180 FLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVA 239
Query: 113 SDVFTMISIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSS 172
+F I KD +S++S++ + Q G EA +FR +++ V N L +V A S
Sbjct: 240 RKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSH 299
Query: 173 LLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAI 232
G+ IH + GL +V G S+ DMY KCG + +A+ AF ++++ ++ SW A+
Sbjct: 300 SGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAM 359
Query: 233 IAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQ-IHSYIVKVG 291
IA + G A +A+ +F M+ G+ P+ ITF+S+L AC+ +G + ++ + G
Sbjct: 360 IAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFG 419
Query: 292 FNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQ 343
+ Y ++ + + L A + + + + + W+++L+AC HK
Sbjct: 420 VEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKN 471
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 93/336 (27%), Positives = 173/336 (51%), Gaps = 12/336 (3%)
Query: 221 IESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQG 280
++ D+ SWN++IA A SGD+ EA+ F M + L P +F + AC+S + G
Sbjct: 36 VDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSG 95
Query: 281 MQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQ 340
Q H G+ ++ + ++L+ MY+ C L DA VF+ I K N+VSW +++
Sbjct: 96 KQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKR-NIVSWTSMIRGYDL 154
Query: 341 HKQAGETFRLFKQMLFSENKP------NMITITNLLGTCAELASLEVGNQVHCFSVKSGL 394
+ A + LFK +L EN + + + +++ C+ + + + +H F +K G
Sbjct: 155 NGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGF 214
Query: 395 VLDVSVSNGLIDMYAKCGS--VIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLF 452
VSV N L+D YAK G V A+++FD + + +S++S++ YA SG+ +EA +F
Sbjct: 215 DRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVF 274
Query: 453 RKM-RNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLA 511
R++ +N V N +T VL A SH G + G +++ + +G+ + ++D+
Sbjct: 275 RRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQV-IRMGLEDDVIVGTSIIDMYC 333
Query: 512 RAGCLYEAETFIRKTGFDPDITTWKTLLSSCKTHGN 547
+ G + A + + ++ +W +++ HG+
Sbjct: 334 KCGRVETARKAFDRMK-NKNVRSWTAMIAGYGMHGH 368
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 119/275 (43%), Gaps = 50/275 (18%)
Query: 317 SVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAEL 376
++F ++ SWN++++ + + E F M P + + C+ L
Sbjct: 30 TLFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSL 89
Query: 377 ASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLI 436
+ G Q H + G D+ VS+ LI MY+ CG + A++VFD N++SW+S+I
Sbjct: 90 FDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMI 149
Query: 437 VGYAMSGLGHEALNLFRKMRNLGVRPNE---------VTYVGVLSACSHIGLVEEGWNLY 487
GY ++G +A++LF ++L V N+ + V V+SACS +
Sbjct: 150 RGYDLNGNALDAVSLF---KDLLVDENDDDDAMFLDSMGLVSVISACSRV---------- 196
Query: 488 NTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTLLSSCKT--H 545
PA+ G +F+ K GFD ++ TLL +
Sbjct: 197 ----------PAK-------------GLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGE 233
Query: 546 GNVDIAERAAENILKLDPSNSAALVLLSSIHASAG 580
G V +A + + I+ D + +++ S++A +G
Sbjct: 234 GGVAVARKIFDQIVDKDRVSYNSIM---SVYAQSG 265
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 317 bits (811), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 187/521 (35%), Positives = 288/521 (55%), Gaps = 13/521 (2%)
Query: 78 RQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISI--KDLISWSSMIRGFT 135
+Q+HA VI GF +V + L + Y ++ A+ F I ++ SW++++ G++
Sbjct: 24 QQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCWKRNRHSWNTILSGYS 83
Query: 136 QLG---YEIEALYLFRDMLRQ--GVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFG 190
+ Y + L L+ M R GV + F L AC L E G IHG+ K G
Sbjct: 84 KSKTCCYS-DVLLLYNRMRRHCDGV---DSFNLVFAIKACVGLGLLENGILIHGLAMKNG 139
Query: 191 LVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFR 250
L ++ + SL +MYA+ G + SA+ F +I + V W ++ + E +F
Sbjct: 140 LDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFC 199
Query: 251 QMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGF-NKEVALYNSLLTMYTKC 309
M GL D++T + L+ AC + A G +H ++ F ++ L S++ MY KC
Sbjct: 200 LMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKC 259
Query: 310 SNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNL 369
L +A +FE S + N+V W ++S + ++A E F LF+QML PN T+ +
Sbjct: 260 RLLDNARKLFET-SVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAI 318
Query: 370 LGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNV 429
L +C+ L SL G VH + +++G+ +D IDMYA+CG++ A+ VFD NV
Sbjct: 319 LVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNV 378
Query: 430 ISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNT 489
ISWSS+I + ++GL EAL+ F KM++ V PN VT+V +LSACSH G V+EGW + +
Sbjct: 379 ISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFES 438
Query: 490 MEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTLLSSCKTHGNVD 549
M + G+ P EH++CMVDLL RAG + EA++FI P + W LLS+C+ H VD
Sbjct: 439 MTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSACRIHKEVD 498
Query: 550 IAERAAENILKLDPSNSAALVLLSSIHASAGNWEDVAKLRK 590
+A AE +L ++P S+ VLLS+I+A AG WE V +R+
Sbjct: 499 LAGEIAEKLLSMEPEKSSVYVLLSNIYADAGMWEMVNCVRR 539
Score = 177 bits (449), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 104/371 (28%), Positives = 193/371 (52%), Gaps = 9/371 (2%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
MY + G+M+ A++VFD + +RN V W ++ GY + + E ++ M +G D LT
Sbjct: 153 MYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDALT 212
Query: 61 FGSIIKACCIAGDIY---LGRQLHAHVIKSGFGGHL-VAQNGLISMYTNFGQVAHASDVF 116
++KAC G+++ +G+ +H I+ F Q +I MY + +A +F
Sbjct: 213 LICLVKAC---GNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLF 269
Query: 117 TMISIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEP 176
++++ W+++I GF + +EA LFR MLR+ + PN+ L ++ +CSSL
Sbjct: 270 ETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESIL-PNQCTLAAILVSCSSLGSL 328
Query: 177 EYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAF 236
+G+ +HG + G+ + + S DMYA+CG + A+T F + +++SW+++I AF
Sbjct: 329 RHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINAF 388
Query: 237 ADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQG-MQIHSYIVKVGFNKE 295
+G EA+ F +M ++P+S+TF+SLL AC+ + +G Q S G E
Sbjct: 389 GINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPE 448
Query: 296 VALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQML 355
Y ++ + + + +A S + + +W A+LSAC HK+ + +++L
Sbjct: 449 EEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSACRIHKEVDLAGEIAEKLL 508
Query: 356 FSENKPNMITI 366
E + + + +
Sbjct: 509 SMEPEKSSVYV 519
Score = 176 bits (445), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 118/490 (24%), Positives = 236/490 (48%), Gaps = 18/490 (3%)
Query: 21 RNVVSWTSMISGYSQNGQG--NEAVVMYIQMLRSGFFPDQLTFGSIIKACCIAGDIYLGR 78
RN SW +++SGYS++ ++ +++Y +M R D IKAC G + G
Sbjct: 70 RNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENGI 129
Query: 79 QLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIKDLISWSSMIRGFTQLG 138
+H +K+G L+ MY G + A VF I +++ + W +++G+ +
Sbjct: 130 LIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYS 189
Query: 139 YEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLV-RNVFS 197
+ E LF M G+ + L + AC ++ + G+ +HG+ + + ++ +
Sbjct: 190 KDPEVFRLFCLMRDTGL-ALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYL 248
Query: 198 GCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGL 257
S+ DMY KC L +A+ F ++V W +I+ FA A EA +FRQM+ +
Sbjct: 249 QASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESI 308
Query: 258 IPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALS 317
+P+ T ++L +C+S +L G +H Y+++ G + + S + MY +C N+ A +
Sbjct: 309 LPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMART 368
Query: 318 VFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELA 377
VF+ + + N++SW+++++A + E F +M PN +T +LL C+
Sbjct: 369 VFDMMPER-NVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSG 427
Query: 378 SLEVG-NQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTE-NPNVISWSSL 435
+++ G Q + G+V + ++D+ + G + A+ D+ P +W +L
Sbjct: 428 NVKEGWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGAL 487
Query: 436 IVGYAMSGLGHEALNLFRKM--RNLGVRPNEVT-YVGVLSACSHIGLVEEGWNLYNTMEE 492
+ + H+ ++L ++ + L + P + + YV + + + G+ W + N +
Sbjct: 488 LSACRI----HKEVDLAGEIAEKLLSMEPEKSSVYVLLSNIYADAGM----WEMVNCVRR 539
Query: 493 ELGIPPAREH 502
++GI R+H
Sbjct: 540 KMGIKGYRKH 549
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 127/278 (45%), Gaps = 4/278 (1%)
Query: 266 SLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAIS-K 324
+LL + LN Q+H+ ++ GF EV L +SL Y + + L A S F I
Sbjct: 9 ALLTILSQAKTLNHTQQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCW 68
Query: 325 NANLVSWNAILSACLQHKQA--GETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVG 382
N SWN ILS + K + L+ +M + + + + C L LE G
Sbjct: 69 KRNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENG 128
Query: 383 NQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMS 442
+H ++K+GL D V+ L++MYA+ G++ AQ+VFD N + W L+ GY
Sbjct: 129 ILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKY 188
Query: 443 GLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREH 502
E LF MR+ G+ + +T + ++ AC ++ + G ++ I +
Sbjct: 189 SKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYL 248
Query: 503 FSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTLLS 540
+ ++D+ + L A +T D ++ W TL+S
Sbjct: 249 QASIIDMYVKCRLLDNARKLF-ETSVDRNVVMWTTLIS 285
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 316 bits (810), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 182/592 (30%), Positives = 319/592 (53%), Gaps = 6/592 (1%)
Query: 4 KCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTFGS 63
K G++ A + FD M +R+VV++ +ISG S+ G A+ +Y +M+ G TF S
Sbjct: 58 KSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLRESASTFPS 117
Query: 64 IIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIKD 123
++ C G Q+H VI GFG ++ ++ L+ +Y V A +F + ++
Sbjct: 118 VLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEMLDRN 177
Query: 124 LISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIH 183
L + ++R F Q G ++ M +GV + N + CS G+Q+H
Sbjct: 178 LAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAK-NGLTYCYMIRGCSHDRLVYEGKQLH 236
Query: 184 GICAKFGL-VRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDA 242
+ K G + N+F L D Y+ CG L + +F + D++SWN+I++ AD G
Sbjct: 237 SLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSV 296
Query: 243 NEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFN-KEVALYNS 301
+++ +F +M G P F+S L C+ + G QIH Y++K+GF+ + + ++
Sbjct: 297 LDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSA 356
Query: 302 LLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKP 361
L+ MY KC+ + ++ +++++ NL N+++++ + + +F M+
Sbjct: 357 LIDMYGKCNGIENSALLYQSL-PCLNLECCNSLMTSLMHCGITKDIIEMFGLMIDEGTGI 415
Query: 362 NMITITNLLG--TCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQR 419
+ +T++ +L + + SL VHC ++KSG DV+VS LID Y K G +++
Sbjct: 416 DEVTLSTVLKALSLSLPESLHSCTLVHCCAIKSGYAADVAVSCSLIDAYTKSGQNEVSRK 475
Query: 420 VFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGL 479
VFD + PN+ +S+I GYA +G+G + + + R+M + + P+EVT + VLS CSH GL
Sbjct: 476 VFDELDTPNIFCLTSIINGYARNGMGTDCVKMLREMDRMNLIPDEVTILSVLSGCSHSGL 535
Query: 480 VEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTLL 539
VEEG +++++E + GI P R+ ++CMVDLL RAG + +AE + + D D W +LL
Sbjct: 536 VEEGELIFDSLESKYGISPGRKLYACMVDLLGRAGLVEKAERLLLQARGDADCVAWSSLL 595
Query: 540 SSCKTHGNVDIAERAAENILKLDPSNSAALVLLSSIHASAGNWEDVAKLRKV 591
SC+ H N I RAAE ++ L+P N A + +S + G++E ++R++
Sbjct: 596 QSCRIHRNETIGRRAAEVLMNLEPENFAVYIQVSKFYFEIGDFEISRQIREI 647
Score = 129 bits (323), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 99/409 (24%), Positives = 193/409 (47%), Gaps = 8/409 (1%)
Query: 2 YGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTF 61
Y CG + + + F+A+ ++V+SW S++S + G +++ ++ +M G P F
Sbjct: 259 YSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVLDSLDLFSKMQFWGKRPSIRPF 318
Query: 62 GSIIKACCIAGDIYLGRQLHAHVIKSGFG-GHLVAQNGLISMYTNFGQVAHASDVFTMIS 120
S + C DI G+Q+H +V+K GF L Q+ LI MY + +++ ++ +
Sbjct: 319 MSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSALIDMYGKCNGIENSALLYQSLP 378
Query: 121 IKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACS-SLLEPEYG 179
+L +S++ G + + +F M+ +G +E L +V A S SL E +
Sbjct: 379 CLNLECCNSLMTSLMHCGITKDIIEMFGLMIDEGT-GIDEVTLSTVLKALSLSLPESLHS 437
Query: 180 RQIHGICA-KFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFAD 238
+ CA K G +V CSL D Y K G ++ F ++++P++ +II +A
Sbjct: 438 CTLVHCCAIKSGYAADVAVSCSLIDAYTKSGQNEVSRKVFDELDTPNIFCLTSIINGYAR 497
Query: 239 SGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQI-HSYIVKVGFNKEVA 297
+G + + + R+M + LIPD +T LS+L C+ + +G I S K G +
Sbjct: 498 NGMGTDCVKMLREMDRMNLIPDEVTILSVLSGCSHSGLVEEGELIFDSLESKYGISPGRK 557
Query: 298 LYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETF-RLFKQMLF 356
LY ++ + + + A + +A+ V+W+++L +C H+ ET R ++L
Sbjct: 558 LYACMVDLLGRAGLVEKAERLLLQARGDADCVAWSSLLQSCRIHRN--ETIGRRAAEVLM 615
Query: 357 SENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLI 405
+ N + E+ E+ Q+ + L+ ++ S+ ++
Sbjct: 616 NLEPENFAVYIQVSKFYFEIGDFEISRQIREIAASRELMREIGYSSVVV 664
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 152/287 (52%), Gaps = 4/287 (1%)
Query: 203 DMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSI 262
D K G L SA AF ++ D+V++N +I+ + G + AI ++ +M+ GL +
Sbjct: 54 DELIKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLRESAS 113
Query: 263 TFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHD-ALSVFEA 321
TF S+L C+ + +G+Q+H ++ +GF + + ++L+ +Y C L D AL +F+
Sbjct: 114 TFPSVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYA-CLRLVDVALKLFDE 172
Query: 322 ISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEV 381
+ + NL N +L Q ++ F ++ +M N +T ++ C+ +
Sbjct: 173 M-LDRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYE 231
Query: 382 GNQVHCFSVKSGL-VLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYA 440
G Q+H VKSG + ++ V+N L+D Y+ CG + + R F++ +VISW+S++ A
Sbjct: 232 GKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCA 291
Query: 441 MSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLY 487
G ++L+LF KM+ G RP+ ++ L+ CS ++ G ++
Sbjct: 292 DYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIH 338
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 116/241 (48%), Gaps = 9/241 (3%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
MYGKC ++++ ++ ++ N+ S+++ G + + M+ M+ G D++T
Sbjct: 360 MYGKCNGIENSALLYQSLPCLNLECCNSLMTSLMHCGITKDIIEMFGLMIDEGTGIDEVT 419
Query: 61 FGSIIKACCIA--GDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTM 118
+++KA ++ ++ +H IKSG+ + LI YT GQ + VF
Sbjct: 420 LSTVLKALSLSLPESLHSCTLVHCCAIKSGYAADVAVSCSLIDAYTKSGQNEVSRKVFDE 479
Query: 119 ISIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEY 178
+ ++ +S+I G+ + G + + + R+M R + P+E + SV S CS E
Sbjct: 480 LDTPNIFCLTSIINGYARNGMGTDCVKMLREMDRMNLI-PDEVTILSVLSGCSHSGLVEE 538
Query: 179 GRQI-HGICAKFGLV--RNVFSGCSLCDMYAKCGFLPSAKTAFYQIE-SPDLVSWNAIIA 234
G I + +K+G+ R +++ + D+ + G + A+ Q D V+W++++
Sbjct: 539 GELIFDSLESKYGISPGRKLYA--CMVDLLGRAGLVEKAERLLLQARGDADCVAWSSLLQ 596
Query: 235 A 235
+
Sbjct: 597 S 597
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 315 bits (808), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 167/553 (30%), Positives = 299/553 (54%), Gaps = 38/553 (6%)
Query: 78 RQLHAHVIKSGFGGHLVAQNGLISM--YTNFGQVAHASDVFTMISIKDLISWSSMIRGFT 135
+Q+ A +I +G A + LI+ + + ++ + I ++ SW+ IRGF+
Sbjct: 70 KQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKILKGIENPNIFSWNVTIRGFS 129
Query: 136 QLGYEIEALYLFRDMLRQGV--YQPNEFVLGSVFSACSSLLEPEYGRQI--HGICAKFGL 191
+ E+ L++ MLR G +P+ F +F C+ L G I H + + L
Sbjct: 130 ESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGHMILGHVLKLRLEL 189
Query: 192 VRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQ 251
V +V + M+A CG + +A+ F + DLVSWN +I + G+A +AI +++
Sbjct: 190 VSHVHNAS--IHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKL 247
Query: 252 MMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSN 311
M G+ PD +T + L+ +C+ LN+G + + Y+ + G + L N+L+ M++KC +
Sbjct: 248 MESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGD 307
Query: 312 LHDALSVFEAISKNA------------------------------NLVSWNAILSACLQH 341
+H+A +F+ + K ++V WNA++ +Q
Sbjct: 308 IHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQA 367
Query: 342 KQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVS 401
K+ + LF++M S KP+ IT+ + L C++L +L+VG +H + K L L+V++
Sbjct: 368 KRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALG 427
Query: 402 NGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVR 461
L+DMYAKCG++ A VF + N ++++++I G A+ G A++ F +M + G+
Sbjct: 428 TSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIA 487
Query: 462 PNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAET 521
P+E+T++G+LSAC H G+++ G + ++ M+ + P +H+S MVDLL RAG L EA+
Sbjct: 488 PDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADR 547
Query: 522 FIRKTGFDPDITTWKTLLSSCKTHGNVDIAERAAENILKLDPSNSAALVLLSSIHASAGN 581
+ + D W LL C+ HGNV++ E+AA+ +L+LDPS+S VLL ++ A
Sbjct: 548 LMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLELDPSDSGIYVLLDGMYGEANM 607
Query: 582 WEDVAKLRKVLDD 594
WED + R+++++
Sbjct: 608 WEDAKRARRMMNE 620
Score = 192 bits (489), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 109/372 (29%), Positives = 186/372 (50%), Gaps = 31/372 (8%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
M+ CG M++AR+VFD +R++VSW +I+GY + G+ +A+ +Y M G PD +T
Sbjct: 200 MFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVT 259
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMIS 120
++ +C + GD+ G++ + +V ++G + N L+ M++ G + A +F +
Sbjct: 260 MIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLE 319
Query: 121 IKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVY------------------------ 156
+ ++SW++MI G+ + G + LF DM + V
Sbjct: 320 KRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQE 379
Query: 157 ------QPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGF 210
+P+E + SACS L + G IH K+ L NV G SL DMYAKCG
Sbjct: 380 MQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGN 439
Query: 211 LPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCA 270
+ A + F+ I++ + +++ AII A GDA+ AIS F +M+ G+ PD ITF+ LL A
Sbjct: 440 ISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSA 499
Query: 271 CTSPMALNQGMQIHSYI-VKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLV 329
C + G S + + N ++ Y+ ++ + + L +A + E++ A+
Sbjct: 500 CCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAA 559
Query: 330 SWNAILSACLQH 341
W A+L C H
Sbjct: 560 VWGALLFGCRMH 571
Score = 191 bits (486), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 130/467 (27%), Positives = 223/467 (47%), Gaps = 43/467 (9%)
Query: 22 NVVSWTSMISGYSQNGQGNEAVVMYIQMLRSG---FFPDQLTFGSIIKACCIAGDIYLGR 78
N+ SW I G+S++ E+ ++Y QMLR G PD T+ + K C LG
Sbjct: 117 NIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGH 176
Query: 79 QLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIKDLISWSSMIRGFTQLG 138
+ HV+K N I M+ + G + +A VF ++DL+SW+ +I G+ ++G
Sbjct: 177 MILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIG 236
Query: 139 YEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGL------- 191
+A+Y+++ M +GV +P++ + + S+CS L + G++ + + GL
Sbjct: 237 EAEKAIYVYKLMESEGV-KPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLV 295
Query: 192 --VRNVFSGC----------------------SLCDMYAKCGFLPSAKTAFYQIESPDLV 227
+ ++FS C ++ YA+CG L ++ F +E D+V
Sbjct: 296 NALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVV 355
Query: 228 SWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYI 287
WNA+I + +A+++F++M PD IT + L AC+ AL+ G+ IH YI
Sbjct: 356 LWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYI 415
Query: 288 VKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGET 347
K + VAL SL+ MY KC N+ +ALSVF I + N +++ AI+ H A
Sbjct: 416 EKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGI-QTRNSLTYTAIIGGLALHGDASTA 474
Query: 348 FRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNG--LI 405
F +M+ + P+ IT LL C ++ G + +KS L+ + + ++
Sbjct: 475 ISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRD-YFSQMKSRFNLNPQLKHYSIMV 533
Query: 406 DMYAKCGSVIHAQRVFDSTE-NPNVISWSSLIVGYAMSG---LGHEA 448
D+ + G + A R+ +S + W +L+ G M G LG +A
Sbjct: 534 DLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKA 580
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 314 bits (805), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 194/604 (32%), Positives = 315/604 (52%), Gaps = 37/604 (6%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLR-SGFFPDQL 59
MY KCG + A VF+ + R+V+S ++++G++ NG EA + QM PD
Sbjct: 335 MYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIA 394
Query: 60 TFGSIIKACCIAGDIYL---GRQLHAHVIKSGFGGH-LVAQNGLISMYTNFGQVAHASDV 115
T SI C GD+ GR +H + ++ L N +I MY G A +
Sbjct: 395 TVVSITSIC---GDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELL 451
Query: 116 FTMISIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVF---SACSS 172
F + +DL+SW+SMI F+Q G+ +A LF++++ + Y ++F L +V ++C S
Sbjct: 452 FKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSE--YSCSKFSLSTVLAILTSCDS 509
Query: 173 LLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAI 232
+G+ +H K G + + F L M E+ DL SWN++
Sbjct: 510 SDSLIFGKSVHCWLQKLGDLTSAF--LRLETMS----------------ETRDLTSWNSV 551
Query: 233 IAAFADSGDANEAISIFRQMMHIGLIP-DSITFLSLLCACTSPMALNQGMQIHSYIVKVG 291
I+ A SG E++ F+ M G I D IT L + A + + QG H +K
Sbjct: 552 ISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRCFHGLAIKSL 611
Query: 292 FNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLF 351
+ L N+L+TMY +C ++ A+ VF IS + NL SWN ++SA Q+K E F+LF
Sbjct: 612 RELDTQLQNTLITMYGRCKDIESAVKVFGLIS-DPNLCSWNCVISALSQNKAGREVFQLF 670
Query: 352 KQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKC 411
+ + +PN IT LL +L S G Q HC ++ G + VS L+DMY+ C
Sbjct: 671 RNLKL---EPNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSAALVDMYSSC 727
Query: 412 GSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMR-NLGVRPNEVTYVGV 470
G + +VF ++ ++ +W+S+I + G+G +A+ LF+++ N + PN+ +++ +
Sbjct: 728 GMLETGMKVFRNSGVNSISAWNSVISAHGFHGMGEKAMELFKELSSNSEMEPNKSSFISL 787
Query: 471 LSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDP 530
LSACSH G ++EG + Y MEE+ G+ P EH +VD+L RAG L EA FI G
Sbjct: 788 LSACSHSGFIDEGLSYYKQMEEKFGVKPVTEHRVWIVDMLGRAGKLREAYEFITGIGEPQ 847
Query: 531 DITTWKTLLSSCKTHGNVDIAERAAENILKLDPSNSAALVLLSSIHASAGNWEDVAKLRK 590
W LLS+C HG+ + + AE + +++P N++ + L++ + G WE+ +LRK
Sbjct: 848 KAGVWGALLSACNYHGDTKLGKEVAEVLFEMEPDNASYYISLANTYVGLGGWEEAVRLRK 907
Query: 591 VLDD 594
+++D
Sbjct: 908 MVED 911
Score = 236 bits (601), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 174/588 (29%), Positives = 284/588 (48%), Gaps = 43/588 (7%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
+Y K ++ A VF M R++VSW ++++ NG +++ + M SG D +T
Sbjct: 232 LYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVT 291
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSGFG--GHLVAQNGLISMYTNFGQVAHASDVFTM 118
F +I AC ++ LG LH VIKSG+ H+ N +ISMY+ G A VF
Sbjct: 292 FSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEE 351
Query: 119 ISIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEY 178
+ +D+IS ++++ GF G EA + M QP+ + S+ S C L
Sbjct: 352 LVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSRE 411
Query: 179 GRQIHGICAKFGLVRNVFSGC-SLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFA 237
GR +HG + + S+ DMY KCG A+ F DLVSWN++I+AF+
Sbjct: 412 GRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFS 471
Query: 238 DSGDANEAISIFRQMM-HIGLIPDSI-TFLSLLCACTSPMALNQGMQIHSYIVKVGFNKE 295
+G ++A ++F++++ S+ T L++L +C S +L G +H ++ K+G
Sbjct: 472 QNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSCDSSDSLIFGKSVHCWLQKLG---- 527
Query: 296 VALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQML 355
+L A E +S+ +L SWN+++S C E+ R F Q +
Sbjct: 528 ---------------DLTSAFLRLETMSETRDLTSWNSVISGCASSGHHLESLRAF-QAM 571
Query: 356 FSENKPNMITITNLLGTCAELASLEVGNQVHCF---SVKSGLVLDVSVSNGLIDMYAKCG 412
E K IT LLGT + +L + Q CF ++KS LD + N LI MY +C
Sbjct: 572 SREGKIRHDLIT-LLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNTLITMYGRCK 630
Query: 413 SVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLS 472
+ A +VF +PN+ SW+ +I + + G E LF RNL + PNE+T+VG+LS
Sbjct: 631 DIESAVKVFGLISDPNLCSWNCVISALSQNKAGREVFQLF---RNLKLEPNEITFVGLLS 687
Query: 473 ACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDI 532
A + +G G + + G + +VD+ + G L R +G + I
Sbjct: 688 ASTQLGSTSYGMQAHCHLIRR-GFQANPFVSAALVDMYSSCGMLETGMKVFRNSGVN-SI 745
Query: 533 TTWKTLLSSCKTHGNVDIAERAAENILKL------DPSNSAALVLLSS 574
+ W +++S+ HG + E+A E +L +P+ S+ + LLS+
Sbjct: 746 SAWNSVISAHGFHG---MGEKAMELFKELSSNSEMEPNKSSFISLLSA 790
Score = 197 bits (501), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 163/583 (27%), Positives = 286/583 (49%), Gaps = 36/583 (6%)
Query: 2 YGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTF 61
YG+ G + + +FD + ++V+ W SMI+ +QNG+ AV ++I+M+ G D T
Sbjct: 132 YGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNGRYIAAVGLFIEMIHKGNEFDSTTL 191
Query: 62 GSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISI 121
A LH I++G G N L+++Y ++ A VFT +
Sbjct: 192 LLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLCNALMNLYAKGENLSSAECVFTHMEH 251
Query: 122 KDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQ 181
+D++SW++++ G+ ++L F+ M G + + V SACSS+ E G
Sbjct: 252 RDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSG-QEADTVTFSCVISACSSIEELTLGES 310
Query: 182 IHGICAKFGLV--RNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADS 239
+HG+ K G +V G S+ MY+KCG +A+T F ++ D++S NAI+ FA +
Sbjct: 311 LHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAAN 370
Query: 240 GDANEAISIFRQMMHIGLI-PDSITFLSLLCACTSPMALNQGMQIHSYIVKVGF-NKEVA 297
G EA I QM + I PD T +S+ C +G +H Y V++ ++ +
Sbjct: 371 GMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALE 430
Query: 298 LYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQML-- 355
+ NS++ MY KC A +F+ + + +LVSWN+++SA Q+ + LFK+++
Sbjct: 431 VINSVIDMYGKCGLTTQAELLFKTTT-HRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSE 489
Query: 356 FSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVI 415
+S +K ++ T+ +L +C SL G VHC+ K G + +
Sbjct: 490 YSCSKFSLSTVLAILTSCDSSDSLIFGKSVHCWLQKLGDLTSAFL--------------- 534
Query: 416 HAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLG-VRPNEVTYVGVLSAC 474
R+ +E ++ SW+S+I G A SG E+L F+ M G +R + +T +G +SA
Sbjct: 535 ---RLETMSETRDLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISAS 591
Query: 475 SHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVD-LLARAGCLYEAETFIRKTGF--DPD 531
++GLV +G + L I RE + + + L+ G + E+ ++ G DP+
Sbjct: 592 GNLGLVLQGRCFHG-----LAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPN 646
Query: 532 ITTWKTLLSSCKTHGNVDIAERAAENILKLDPSNSAALVLLSS 574
+ +W ++S+ + + N LKL+P+ + LLS+
Sbjct: 647 LCSWNCVISALSQNKAGREVFQLFRN-LKLEPNEITFVGLLSA 688
Score = 182 bits (461), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 139/511 (27%), Positives = 256/511 (50%), Gaps = 34/511 (6%)
Query: 78 RQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIKDLISWSSMIRGFTQL 137
R +H +K G L + L++ Y G++ +S +F + KD+I W+SMI Q
Sbjct: 107 RSVHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQN 166
Query: 138 GYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQ---IHGICAKFGLVRN 194
G I A+ LF +M+ +G NEF ++ A S+L R+ +H + + GLV +
Sbjct: 167 GRYIAAVGLFIEMIHKG----NEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGD 222
Query: 195 VFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMH 254
+L ++YAK L SA+ F +E D+VSWN I+ +G +++ F+ M
Sbjct: 223 SSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTG 282
Query: 255 IGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKE--VALYNSLLTMYTKCSNL 312
G D++TF ++ AC+S L G +H ++K G++ E V++ NS+++MY+KC +
Sbjct: 283 SGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDT 342
Query: 313 HDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSEN-KPNMITITNLLG 371
A +VFE + +++S NAIL+ + E F + QM + +P++ T+ ++
Sbjct: 343 EAAETVFEELVCR-DVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITS 401
Query: 372 TCAELASLEVGNQVHCFSVKSGL-VLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVI 430
C +L+ G VH ++V+ + + V N +IDMY KCG A+ +F +T + +++
Sbjct: 402 ICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLV 461
Query: 431 SWSSLIVGYAMSGLGHEALNLFRKM--RNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYN 488
SW+S+I ++ +G H+A NLF+++ + + T + +L++C + G +++
Sbjct: 462 SWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSCDSSDSLIFGKSVH- 520
Query: 489 TMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTLLSSCKTHGNV 548
C L + G L A + D+T+W +++S C + G+
Sbjct: 521 ----------------CW---LQKLGDLTSAFLRLETMSETRDLTSWNSVISGCASSGHH 561
Query: 549 DIAERAAENILKLDPSNSAALVLLSSIHASA 579
+ RA + + + + LL +I AS
Sbjct: 562 LESLRAFQAMSREGKIRHDLITLLGTISASG 592
Score = 158 bits (400), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 104/376 (27%), Positives = 197/376 (52%), Gaps = 7/376 (1%)
Query: 175 EPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIA 234
E E R +H K GL++++ + L Y + G L S+ F +++ D++ WN++I
Sbjct: 102 ETETPRSVHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMIT 161
Query: 235 AFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNK 294
A +G A+ +F +M+H G DS T L A +S + +H ++ G
Sbjct: 162 ALNQNGRYIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVG 221
Query: 295 EVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQM 354
+ +L N+L+ +Y K NL A VF + ++ ++VSWN I++ CL + ++ + FK M
Sbjct: 222 DSSLCNALMNLYAKGENLSSAECVFTHM-EHRDIVSWNTIMTKCLANGHPRKSLQYFKSM 280
Query: 355 LFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLD--VSVSNGLIDMYAKCG 412
S + + +T + ++ C+ + L +G +H +KSG + VSV N +I MY+KCG
Sbjct: 281 TGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCG 340
Query: 413 SVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLG-VRPNEVTYVGVL 471
A+ VF+ +VIS ++++ G+A +G+ EA + +M+++ ++P+ T V +
Sbjct: 341 DTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSIT 400
Query: 472 SACSHIGLVEEGWNLYN-TMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDP 530
S C + EG ++ T+ E+ A E + ++D+ + G +AE + KT
Sbjct: 401 SICGDLSFSREGRAVHGYTVRMEMQ-SRALEVINSVIDMYGKCGLTTQAE-LLFKTTTHR 458
Query: 531 DITTWKTLLSSCKTHG 546
D+ +W +++S+ +G
Sbjct: 459 DLVSWNSMISAFSQNG 474
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 311 bits (796), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 174/595 (29%), Positives = 313/595 (52%), Gaps = 4/595 (0%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
+Y KCG K+A ++F ++ + +SWT MIS + EA+ Y +M+++G P++ T
Sbjct: 168 LYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFT 227
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMIS 120
F ++ A G + G+ +H+++I G ++V + L+ Y+ F ++ A V
Sbjct: 228 FVKLLGASSFLG-LEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSG 286
Query: 121 IKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGR 180
+D+ W+S++ GF + EA+ F +M G+ QPN F ++ S CS++ ++G+
Sbjct: 287 EQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGL-QPNNFTYSAILSLCSAVRSLDFGK 345
Query: 181 QIHGICAKFGLVRNVFSGCSLCDMYAKCGFLP-SAKTAFYQIESPDLVSWNAIIAAFADS 239
QIH K G + G +L DMY KC A F + SP++VSW +I D
Sbjct: 346 QIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDH 405
Query: 240 GDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALY 299
G + + +M+ + P+ +T +L AC+ + + ++IH+Y+++ + E+ +
Sbjct: 406 GFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVG 465
Query: 300 NSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSEN 359
NSL+ Y + A +V ++ + N +++ ++++ + + + M
Sbjct: 466 NSLVDAYASSRKVDYAWNVIRSMKRRDN-ITYTSLVTRFNELGKHEMALSVINYMYGDGI 524
Query: 360 KPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQR 419
+ + +++ + A L +LE G +HC+SVKSG SV N L+DMY+KCGS+ A++
Sbjct: 525 RMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKK 584
Query: 420 VFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGL 479
VF+ P+V+SW+ L+ G A +G AL+ F +MR P+ VT++ +LSACS+ L
Sbjct: 585 VFEEIATPDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNGRL 644
Query: 480 VEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTLL 539
+ G + M++ I P EH+ +V +L RAG L EA + P+ +KTLL
Sbjct: 645 TDLGLEYFQVMKKIYNIEPQVEHYVHLVGILGRAGRLEEATGVVETMHLKPNAMIFKTLL 704
Query: 540 SSCKTHGNVDIAERAAENILKLDPSNSAALVLLSSIHASAGNWEDVAKLRKVLDD 594
+C+ GN+ + E A L L PS+ A +LL+ ++ +G E K R ++ +
Sbjct: 705 RACRYRGNLSLGEDMANKGLALAPSDPALYILLADLYDESGKPELAQKTRNLMTE 759
Score = 276 bits (706), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 170/577 (29%), Positives = 308/577 (53%), Gaps = 8/577 (1%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
+Y K + +AR++FD M R V +WT MIS ++++ + A+ ++ +M+ SG P++ T
Sbjct: 67 LYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFT 126
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMIS 120
F S++++C DI G ++H VIK+GF G+ V + L +Y+ GQ A ++F+ +
Sbjct: 127 FSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQ 186
Query: 121 IKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGR 180
D ISW+ MI EAL + +M++ GV PNEF + A SS L E+G+
Sbjct: 187 NADTISWTMMISSLVGARKWREALQFYSEMVKAGV-PPNEFTFVKLLGA-SSFLGLEFGK 244
Query: 181 QIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSG 240
IH G+ NV SL D Y++ + A D+ W ++++ F +
Sbjct: 245 TIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNL 304
Query: 241 DANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYN 300
A EA+ F +M +GL P++ T+ ++L C++ +L+ G QIHS +KVGF + N
Sbjct: 305 RAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGN 364
Query: 301 SLLTMYTKCSNLH-DALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSEN 359
+L+ MY KCS +A VF A+ + N+VSW ++ + H + F L +M+ E
Sbjct: 365 ALVDMYMKCSASEVEASRVFGAMV-SPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREV 423
Query: 360 KPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQR 419
+PN++T++ +L C++L + ++H + ++ + ++ V N L+D YA V +A
Sbjct: 424 EPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWN 483
Query: 420 VFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGL 479
V S + + I+++SL+ + G AL++ M G+R ++++ G +SA +++G
Sbjct: 484 VIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGA 543
Query: 480 VEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTLL 539
+E G +L+ + G A + +VD+ ++ G L +A+ + PD+ +W L+
Sbjct: 544 LETGKHLH-CYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIA-TPDVVSWNGLV 601
Query: 540 SSCKTHGNVDIAERAAENIL--KLDPSNSAALVLLSS 574
S ++G + A A E + + +P + L+LLS+
Sbjct: 602 SGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSA 638
Score = 232 bits (591), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 140/431 (32%), Positives = 222/431 (51%), Gaps = 10/431 (2%)
Query: 54 FFPDQLTFGSIIKAC------CIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFG 107
F G++ K+C C + +G +H VIK G +L N L+S+Y
Sbjct: 13 FLSRTNELGNLQKSCIRILSFCESNSSRIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTD 72
Query: 108 QVAHASDVFTMISIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVF 167
+ +A +F +S + + +W+ MI FT+ AL LF +M+ G + PNEF SV
Sbjct: 73 GIWNARKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTH-PNEFTFSSVV 131
Query: 168 SACSSLLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLV 227
+C+ L + YG ++HG K G N G SL D+Y+KCG A F +++ D +
Sbjct: 132 RSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTI 191
Query: 228 SWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYI 287
SW +I++ + EA+ + +M+ G+ P+ TF+ LL A +S + L G IHS I
Sbjct: 192 SWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGA-SSFLGLEFGKTIHSNI 250
Query: 288 VKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGET 347
+ G V L SL+ Y++ S + DA+ V + S ++ W +++S +++ +A E
Sbjct: 251 IVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNS-SGEQDVFLWTSVVSGFVRNLRAKEA 309
Query: 348 FRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDM 407
F +M +PN T + +L C+ + SL+ G Q+H ++K G V N L+DM
Sbjct: 310 VGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDM 369
Query: 408 YAKC-GSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVT 466
Y KC S + A RVF + +PNV+SW++LI+G G + L +M V PN VT
Sbjct: 370 YMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVT 429
Query: 467 YVGVLSACSHI 477
GVL ACS +
Sbjct: 430 LSGVLRACSKL 440
Score = 171 bits (432), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 103/392 (26%), Positives = 200/392 (51%), Gaps = 9/392 (2%)
Query: 163 LGSVFSACSSLLE------PEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKT 216
LG++ +C +L G IH KFGL+ N+ +L +Y K + +A+
Sbjct: 20 LGNLQKSCIRILSFCESNSSRIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARK 79
Query: 217 AFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMA 276
F ++ + +W +I+AF S + A+S+F +MM G P+ TF S++ +C
Sbjct: 80 LFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRD 139
Query: 277 LNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILS 336
++ G ++H ++K GF + +SL +Y+KC +A +F ++ +NA+ +SW ++S
Sbjct: 140 ISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSL-QNADTISWTMMIS 198
Query: 337 ACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVL 396
+ + ++ E + + +M+ + PN T LLG + L LE G +H + G+ L
Sbjct: 199 SLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLG-LEFGKTIHSNIIVRGIPL 257
Query: 397 DVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMR 456
+V + L+D Y++ + A RV +S+ +V W+S++ G+ + EA+ F +MR
Sbjct: 258 NVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMR 317
Query: 457 NLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCL 516
+LG++PN TY +LS CS + ++ G ++ + ++G + + + +VD+ +
Sbjct: 318 SLGLQPNNFTYSAILSLCSAVRSLDFGKQIH-SQTIKVGFEDSTDVGNALVDMYMKCSAS 376
Query: 517 YEAETFIRKTGFDPDITTWKTLLSSCKTHGNV 548
+ + P++ +W TL+ HG V
Sbjct: 377 EVEASRVFGAMVSPNVVSWTTLILGLVDHGFV 408
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 311 bits (796), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 183/569 (32%), Positives = 297/569 (52%), Gaps = 38/569 (6%)
Query: 62 GSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISI 121
S++ AC G Q+HAH I SG H V L++ Y+ F A + I
Sbjct: 47 ASLLSACVDVRAFLAGVQVHAHCISSGVEYHSVLVPKLVTFYSAFNLHNEAQSIIENSDI 106
Query: 122 KDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQ 181
+ W+ +I + + E + ++ M+ +G+ +P+ F SV AC L+ +GR
Sbjct: 107 LHPLPWNVLIASYAKNELFEEVIAAYKRMVSKGI-RPDAFTYPSVLKACGETLDVAFGRV 165
Query: 182 IHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGD 241
+HG +++ +L MY + + A+ F ++ D VSWNA+I +A G
Sbjct: 166 VHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGM 225
Query: 242 ANEAISIFRQMMH--------------------------IGLIP---------DSITFLS 266
+EA +F +M +GLI D + +
Sbjct: 226 WSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMII 285
Query: 267 LLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNA 326
L AC+ A+ G +IH + ++ + N+L+TMY+KC +L AL VF +N+
Sbjct: 286 GLKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENS 345
Query: 327 NLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVH 386
L +WN+I+S Q ++ E L ++ML + +PN IT+ ++L CA +A+L+ G + H
Sbjct: 346 -LCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFH 404
Query: 387 CFSVKSGLVLDVS-VSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLG 445
C+ ++ D + + N L+D+YAK G ++ A++V D + ++++SLI GY G G
Sbjct: 405 CYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEG 464
Query: 446 HEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSC 505
AL LF++M G++P+ VT V VLSACSH LV EG L+ M+ E GI P +HFSC
Sbjct: 465 GVALALFKEMTRSGIKPDHVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSC 524
Query: 506 MVDLLARAGCLYEAETFIRKTGFDPDITTWKTLLSSCKTHGNVDIAERAAENILKLDPSN 565
MVDL RAG L +A+ I + P TW TLL++C HGN I + AAE +L++ P N
Sbjct: 525 MVDLYGRAGFLAKAKDIIHNMPYKPSGATWATLLNACHIHGNTQIGKWAAEKLLEMKPEN 584
Query: 566 SAALVLLSSIHASAGNWEDVAKLRKVLDD 594
VL+++++A+AG+W +A++R ++ D
Sbjct: 585 PGYYVLIANMYAAAGSWSKLAEVRTIMRD 613
Score = 168 bits (426), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 120/468 (25%), Positives = 213/468 (45%), Gaps = 46/468 (9%)
Query: 10 DARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTFGSIIKACC 69
+A+ + + + + + W +I+ Y++N E + Y +M+ G PD T+ S++KAC
Sbjct: 96 EAQSIIENSDILHPLPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACG 155
Query: 70 IAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIKDLISWSS 129
D+ GR +H + S + L N LISMY F + A +F + +D +SW++
Sbjct: 156 ETLDVAFGRVVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNA 215
Query: 130 MIRGFTQLGYEIEALYLFRDMLRQGV---------------------------------- 155
+I + G EA LF M GV
Sbjct: 216 VINCYASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFP 275
Query: 156 --YQPNEFVLGSVFSACSSLLEPEYGRQIHG--ICAKFGLVRNVFSGCSLCDMYAKCGFL 211
P ++G ACS + G++IHG I + + + NV + +L MY+KC L
Sbjct: 276 TSLDPVAMIIG--LKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRN--TLITMYSKCKDL 331
Query: 212 PSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCAC 271
A F Q E L +WN+II+ +A + EA + R+M+ G P+SIT S+L C
Sbjct: 332 RHALIVFRQTEENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLC 391
Query: 272 TSPMALNQGMQIHSYIVKVG-FNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVS 330
L G + H YI++ F L+NSL+ +Y K + A V + +SK + V+
Sbjct: 392 ARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKR-DEVT 450
Query: 331 WNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHC-FS 389
+ +++ + G LFK+M S KP+ +T+ +L C+ + G ++
Sbjct: 451 YTSLIDGYGNQGEGGVALALFKEMTRSGIKPDHVTVVAVLSACSHSKLVHEGERLFMKMQ 510
Query: 390 VKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTE-NPNVISWSSLI 436
+ G+ + + ++D+Y + G + A+ + + P+ +W++L+
Sbjct: 511 CEYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIHNMPYKPSGATWATLL 558
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 125/238 (52%), Gaps = 4/238 (1%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
MY KC ++ A VF ++ +W S+ISGY+Q + EA + +ML +GF P+ +T
Sbjct: 324 MYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSIT 383
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSG-FGGHLVAQNGLISMYTNFGQVAHASDVFTMI 119
SI+ C ++ G++ H ++++ F + + N L+ +Y G++ A V ++
Sbjct: 384 LASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLM 443
Query: 120 SIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACS-SLLEPEY 178
S +D ++++S+I G+ G AL LF++M R G+ +P+ + +V SACS S L E
Sbjct: 444 SKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGI-KPDHVTVVAVLSACSHSKLVHEG 502
Query: 179 GRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIE-SPDLVSWNAIIAA 235
R + ++G+ + + D+Y + GFL AK + + P +W ++ A
Sbjct: 503 ERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIHNMPYKPSGATWATLLNA 560
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 77/145 (53%), Gaps = 7/145 (4%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
+Y K G + A+QV D M R+ V++TS+I GY G+G A+ ++ +M RSG PD +T
Sbjct: 426 VYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDHVT 485
Query: 61 FGSIIKACCIAGDIYLGRQLHAHV-IKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMI 119
+++ AC + ++ G +L + + G L + ++ +Y G +A A D+ +
Sbjct: 486 VVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIHNM 545
Query: 120 SIKDL-ISWSSM-----IRGFTQLG 138
K +W+++ I G TQ+G
Sbjct: 546 PYKPSGATWATLLNACHIHGNTQIG 570
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 307 bits (787), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 170/479 (35%), Positives = 270/479 (56%), Gaps = 4/479 (0%)
Query: 4 KCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGF-FPDQLTFG 62
+ G + AR+VFD+M +N V+WT+MI GY + G +EA ++ ++ G F ++ F
Sbjct: 129 RLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIRFTNERMFV 188
Query: 63 SIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIK 122
++ C + LGRQ+H +++K G G +L+ ++ L+ Y G++ A F M+ K
Sbjct: 189 CLLNLCSRRAEFELGRQVHGNMVKVGVG-NLIVESSLVYFYAQCGELTSALRAFDMMEEK 247
Query: 123 DLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQI 182
D+ISW+++I ++ G+ I+A+ +F ML + PNEF + S+ ACS +GRQ+
Sbjct: 248 DVISWTAVISACSRKGHGIKAIGMFIGMLNHW-FLPNEFTVCSILKACSEEKALRFGRQV 306
Query: 183 HGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDA 242
H + K + +VF G SL DMYAKCG + + F + + + V+W +IIAA A G
Sbjct: 307 HSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFG 366
Query: 243 NEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSL 302
EAIS+FR M LI +++T +S+L AC S AL G ++H+ I+K K V + ++L
Sbjct: 367 EEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTL 426
Query: 303 LTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPN 362
+ +Y KC DA +V + + ++VSW A++S C E K+M+ +PN
Sbjct: 427 VWLYCKCGESRDAFNVLQQLPSR-DVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPN 485
Query: 363 MITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFD 422
T ++ L CA SL +G +H + K+ + +V V + LI MYAKCG V A RVFD
Sbjct: 486 PFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFD 545
Query: 423 STENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVE 481
S N++SW ++I+GYA +G EAL L +M G ++ + +LS C I L E
Sbjct: 546 SMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEVDDYIFATILSTCGDIELDE 604
Score = 232 bits (592), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 156/517 (30%), Positives = 255/517 (49%), Gaps = 52/517 (10%)
Query: 76 LGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIKDLISWSSMIRGFT 135
L +++HA +K + N LIS G + +A VF + K+ ++W++MI G+
Sbjct: 100 LIKRIHAMALKCFDDQVIYFGNNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYL 159
Query: 136 QLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNV 195
+ G E EA LF D ++ G+ NE + + + CS E E GRQ+HG K G V N+
Sbjct: 160 KYGLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVG-VGNL 218
Query: 196 FSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHI 255
SL YA+CG L SA AF +E D++SW A+I+A + G +AI +F M++
Sbjct: 219 IVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNH 278
Query: 256 GLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDA 315
+P+ T S+L AC+ AL G Q+HS +VK +V + SL+ MY KC + D
Sbjct: 279 WFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDC 338
Query: 316 LSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAE 375
VF+ +S N N V+W +I++A + E LF+ M N +T+ ++L C
Sbjct: 339 RKVFDGMS-NRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGS 397
Query: 376 LASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSL 435
+ +L +G ++H +K+ + +V + + L+ +Y KCG A V + +V+SW+++
Sbjct: 398 VGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAM 457
Query: 436 IVGYAMSGLGH--EALNLFRKMRNLGVRPNEVTYVGVLSACSH----------------- 476
I G S LGH EAL+ ++M GV PN TY L AC++
Sbjct: 458 ISG--CSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKN 515
Query: 477 ------------------IGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYE 518
G V E + ++++M E+ + + M+ AR G E
Sbjct: 516 HALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVS-----WKAMIMGYARNGFCRE 570
Query: 519 AETFIRK---TGFDPDITTWKTLLSSCKTHGNVDIAE 552
A + + GF+ D + T+LS+C G++++ E
Sbjct: 571 ALKLMYRMEAEGFEVDDYIFATILSTC---GDIELDE 604
Score = 201 bits (512), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 116/375 (30%), Positives = 199/375 (53%), Gaps = 2/375 (0%)
Query: 2 YGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTF 61
Y +CG + A + FD M ++V+SWT++IS S+ G G +A+ M+I ML F P++ T
Sbjct: 228 YAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTV 287
Query: 62 GSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISI 121
SI+KAC + GRQ+H+ V+K + L+ MY G+++ VF +S
Sbjct: 288 CSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSN 347
Query: 122 KDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQ 181
++ ++W+S+I + G+ EA+ LFR M R+ + N + S+ AC S+ G++
Sbjct: 348 RNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLI-ANNLTVVSILRACGSVGALLLGKE 406
Query: 182 IHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGD 241
+H K + +NV+ G +L +Y KCG A Q+ S D+VSW A+I+ + G
Sbjct: 407 LHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGH 466
Query: 242 ANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNS 301
+EA+ ++M+ G+ P+ T+ S L AC + +L G IHS K V + ++
Sbjct: 467 ESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSA 526
Query: 302 LLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKP 361
L+ MY KC + +A VF+++ + NLVSW A++ ++ E +L +M +
Sbjct: 527 LIHMYAKCGFVSEAFRVFDSMPEK-NLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEV 585
Query: 362 NMITITNLLGTCAEL 376
+ +L TC ++
Sbjct: 586 DDYIFATILSTCGDI 600
Score = 194 bits (494), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 100/271 (36%), Positives = 155/271 (57%), Gaps = 1/271 (0%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
MY KCG + D R+VFD M RN V+WTS+I+ +++ G G EA+ ++ M R + LT
Sbjct: 328 MYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLT 387
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMIS 120
SI++AC G + LG++LHA +IK+ ++ + L+ +Y G+ A +V +
Sbjct: 388 VVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLP 447
Query: 121 IKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGR 180
+D++SW++MI G + LG+E EAL ++M+++GV +PN F S AC++ GR
Sbjct: 448 SRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGV-EPNPFTYSSALKACANSESLLIGR 506
Query: 181 QIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSG 240
IH I K + NVF G +L MYAKCGF+ A F + +LVSW A+I +A +G
Sbjct: 507 SIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNG 566
Query: 241 DANEAISIFRQMMHIGLIPDSITFLSLLCAC 271
EA+ + +M G D F ++L C
Sbjct: 567 FCREALKLMYRMEAEGFEVDDYIFATILSTC 597
Score = 175 bits (444), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 118/420 (28%), Positives = 209/420 (49%), Gaps = 29/420 (6%)
Query: 180 RQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADS 239
++IH + K + ++ G +L + G L A+ F + + V+W A+I +
Sbjct: 102 KRIHAMALKCFDDQVIYFGNNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKY 161
Query: 240 GDANEAISIFRQMMHIGL-IPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVAL 298
G +EA ++F + G+ + F+ LL C+ G Q+H +VKVG + +
Sbjct: 162 GLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGVGNLI-V 220
Query: 299 YNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSE 358
+SL+ Y +C L AL F+ + + +++SW A++SAC + + +F ML
Sbjct: 221 ESSLVYFYAQCGELTSALRAFDMMEEK-DVISWTAVISACSRKGHGIKAIGMFIGMLNHW 279
Query: 359 NKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQ 418
PN T+ ++L C+E +L G QVH VK + DV V L+DMYAKCG + +
Sbjct: 280 FLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCR 339
Query: 419 RVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIG 478
+VFD N N ++W+S+I +A G G EA++LFR M+ + N +T V +L AC +G
Sbjct: 340 KVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVG 399
Query: 479 LVEEGWNLY-----NTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDIT 533
+ G L+ N++E+ + I S +V L + G +A +++ D+
Sbjct: 400 ALLLGKELHAQIIKNSIEKNVYIG------STLVWLYCKCGESRDAFNVLQQLP-SRDVV 452
Query: 534 TWKTLLSSCKTHGN----VDIAERAAENILKLDP----------SNSAALVLLSSIHASA 579
+W ++S C + G+ +D + + ++ +P +NS +L++ SIH+ A
Sbjct: 453 SWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIA 512
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 307 bits (786), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 187/644 (29%), Positives = 317/644 (49%), Gaps = 72/644 (11%)
Query: 2 YGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTF 61
YG+C S+ A ++FD M R+ ++W ++ ++G +AV ++ +M SG T
Sbjct: 33 YGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTM 92
Query: 62 GSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISI 121
+++ C GRQ+H +V++ G ++ N LI MY+ G++ + VF +
Sbjct: 93 VKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKD 152
Query: 122 KDLISWSSMIRGFTQLGYEIEALYLFRDM----LRQGVYQPNEFVLG------------- 164
++L SW+S++ +T+LGY +A+ L +M L+ + N + G
Sbjct: 153 RNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAV 212
Query: 165 --------------SVFSACSSLLEP---EYGRQIHGICAKFGLVRNVFSGCSLCDMYAK 207
S+ S ++ EP + G+ IHG + L +V+ +L DMY K
Sbjct: 213 LKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIK 272
Query: 208 CGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSL 267
G+LP A+ F +++ ++V+WN++++ + + +A ++ +M G+ PD+IT
Sbjct: 273 TGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAIT---- 328
Query: 268 LCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNA- 326
+NSL + Y AL V + +
Sbjct: 329 -------------------------------WNSLASGYATLGKPEKALDVIGKMKEKGV 357
Query: 327 --NLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQ 384
N+VSW AI S C ++ ++F +M PN T++ LL L+ L G +
Sbjct: 358 APNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKE 417
Query: 385 VHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGL 444
VH F ++ L+ D V+ L+DMY K G + A +F +N ++ SW+ +++GYAM G
Sbjct: 418 VHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGR 477
Query: 445 GHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFS 504
G E + F M G+ P+ +T+ VLS C + GLV+EGW ++ M GI P EH S
Sbjct: 478 GEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCS 537
Query: 505 CMVDLLARAGCLYEAETFIRKTGFDPDITTWKTLLSSCKTHGNVDIAERAAENILKLDPS 564
CMVDLL R+G L EA FI+ PD T W LSSCK H ++++AE A + + L+P
Sbjct: 538 CMVDLLGRSGYLDEAWDFIQTMSLKPDATIWGAFLSSCKIHRDLELAEIAWKRLQVLEPH 597
Query: 565 NSAALVLLSSIHASAGNWEDVAKLRKVLDDGYDPAQRLGIRISI 608
NSA +++ +++++ WEDV ++R ++ + Q L I I
Sbjct: 598 NSANYMMMINLYSNLNRWEDVERIRNLMRNNRVRVQDLWSWIQI 641
Score = 140 bits (352), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 102/473 (21%), Positives = 209/473 (44%), Gaps = 70/473 (14%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
MY + G ++ +R+VF++M RN+ SW S++S Y++ G ++A+ + +M G PD +T
Sbjct: 133 MYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVT 192
Query: 61 FG-----------------------------------SIIKACCIAGDIYLGRQLHAHVI 85
+ S+++A G + LG+ +H +++
Sbjct: 193 WNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYIL 252
Query: 86 KSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIKDLISWSSMIRGFTQLGYEIEALY 145
++ + + LI MY G + +A VF M+ K++++W+S++ G + +A
Sbjct: 253 RNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEA 312
Query: 146 LFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMY 205
L M ++G+ +P+ S+ S ++L +PE + G + G+
Sbjct: 313 LMIRMEKEGI-KPDAITWNSLASGYATLGKPEKALDVIGKMKEKGV-------------- 357
Query: 206 AKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFL 265
+P++VSW AI + + +G+ A+ +F +M G+ P++ T
Sbjct: 358 -----------------APNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMS 400
Query: 266 SLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKN 325
+LL L+ G ++H + ++ + + +L+ MY K +L A+ +F I KN
Sbjct: 401 TLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGI-KN 459
Query: 326 ANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVG-NQ 384
+L SWN +L + E F ML + +P+ IT T++L C ++ G
Sbjct: 460 KSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKY 519
Query: 385 VHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTE-NPNVISWSSLI 436
+ G++ + + ++D+ + G + A + P+ W + +
Sbjct: 520 FDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQTMSLKPDATIWGAFL 572
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 130/548 (23%), Positives = 222/548 (40%), Gaps = 112/548 (20%)
Query: 75 YLGRQLHAHVIKSGF-GGHLVAQNGLISMYTNFGQVAHASDVFTMISIKDLISWSSMIRG 133
+LG +H +IK G + + Y + A+ +F + +D ++W+ ++
Sbjct: 4 FLGLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMV 63
Query: 134 FTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVR 193
+ G +A+ LFR+M G + + + + CS+ GRQIHG + GL
Sbjct: 64 NLRSGNWEKAVELFREMQFSGA-KAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLES 122
Query: 194 NVFSGCSLCDMYAKCGFLPSAKTAFYQIE------------------------------- 222
NV SL MY++ G L ++ F ++
Sbjct: 123 NVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEME 182
Query: 223 ----SPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALN 278
PD+V+WN++++ +A G + +AI++ ++M GL P + + SLL A P L
Sbjct: 183 ICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLK 242
Query: 279 QGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILS-- 336
G IH YI++ +V + +L+ MY K L A VF+ + N+V+WN+++S
Sbjct: 243 LGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAK-NIVAWNSLVSGL 301
Query: 337 --ACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGL 394
ACL R+ K+ + KP+ IT +L A L E
Sbjct: 302 SYACLLKDAEALMIRMEKEGI----KPDAITWNSLASGYATLGKPEKA------------ 345
Query: 395 VLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRK 454
LDV ++ + PNV+SW+++ G + +G AL +F K
Sbjct: 346 -LDV------------------IGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIK 386
Query: 455 MRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAG 514
M+ GV PN T +L + L+ G ++ + I A + +VD+ ++G
Sbjct: 387 MQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVA-TALVDMYGKSG 445
Query: 515 CLYEA-ETF---------------------------------IRKTGFDPDITTWKTLLS 540
L A E F + + G +PD T+ ++LS
Sbjct: 446 DLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLS 505
Query: 541 SCKTHGNV 548
CK G V
Sbjct: 506 VCKNSGLV 513
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 106/223 (47%), Gaps = 7/223 (3%)
Query: 381 VGNQVHCFSVKSGLV-LDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGY 439
+G +H +K GL D V + + Y +C S+ A ++FD + ++W+ +++
Sbjct: 5 LGLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVN 64
Query: 440 AMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPA 499
SG +A+ LFR+M+ G + + T V +L CS+ EG ++ + LG+
Sbjct: 65 LRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYV-LRLGLESN 123
Query: 500 REHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTLLSSCKTHGNVD--IAERAAEN 557
+ ++ + +R G L E + + D ++++W ++LSS G VD I
Sbjct: 124 VSMCNSLIVMYSRNGKL-ELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEME 182
Query: 558 ILKLDPSNSAALVLLSSIHASAGNWED-VAKLRKVLDDGYDPA 599
I L P LLS +AS G +D +A L+++ G P+
Sbjct: 183 ICGLKPDIVTWNSLLSG-YASKGLSKDAIAVLKRMQIAGLKPS 224
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 306 bits (785), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 184/576 (31%), Positives = 290/576 (50%), Gaps = 43/576 (7%)
Query: 56 PDQLTFGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDV 115
P++ TF ++K+C GD+ GR LHA V+K+GF + L+SMY QV A V
Sbjct: 29 PNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKV 88
Query: 116 FTMISIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLE 175
+ + + S ++ + G + G+ +A +F D G N + SV C +
Sbjct: 89 LDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGM-NSVTVASVLGGCGDI-- 145
Query: 176 PEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAA 235
E G Q+H + K G V+ G SL MY++CG A F ++ +V++NA I+
Sbjct: 146 -EGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISG 204
Query: 236 FADSGDANEAISIFRQMMHIG-LIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNK 294
++G N S+F M P+ +TF++ + AC S + L G Q+H ++K F
Sbjct: 205 LMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQF 264
Query: 295 EVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACL---QHKQAGE----- 346
E + +L+ MY+KC A VF + NL+SWN+++S + QH+ A E
Sbjct: 265 ETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKL 324
Query: 347 ---------------------------TFRLFKQMLFSENKPNMITITNLLGTCAELASL 379
F+ F++ML P++ +T+LL C+++ +L
Sbjct: 325 DSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTL 384
Query: 380 EVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENP--NVISWSSLIV 437
+ G ++H +K+ D+ V LIDMY KCG A+R+FD E + + W+ +I
Sbjct: 385 KNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMIS 444
Query: 438 GYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIP 497
GY G A+ +F +R V P+ T+ VLSACSH G VE+G ++ M+EE G
Sbjct: 445 GYGKHGECESAIEIFELLREEKVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQEEYGYK 504
Query: 498 PAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTLLSSCKTHGNVDIAERAAEN 557
P+ EH CM+DLL R+G L EA+ I + +LL SC+ H + + E AA
Sbjct: 505 PSTEHIGCMIDLLGRSGRLREAKEVIDQMSEPSSSVY-SSLLGSCRQHLDPVLGEEAAMK 563
Query: 558 ILKLDPSNSAALVLLSSIHASAGNWEDVAKLRKVLD 593
+ +L+P N A V+LSSI+A+ WEDV +R+V+D
Sbjct: 564 LAELEPENPAPFVILSSIYAALERWEDVESIRQVID 599
Score = 186 bits (471), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 121/460 (26%), Positives = 209/460 (45%), Gaps = 41/460 (8%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
MY K + DA +V D M R + S + +SG +NG +A M+ SG + +T
Sbjct: 75 MYMKVKQVTDALKVLDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVT 134
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMIS 120
S++ C GDI G QLH +KSGF + L+SMY+ G+ A+ +F +
Sbjct: 135 VASVLGGC---GDIEGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVP 191
Query: 121 IKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGR 180
K ++++++ I G + G +F M + +PN+ + +AC+SLL +YGR
Sbjct: 192 HKSVVTYNAFISGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGR 251
Query: 181 QIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIE------------------ 222
Q+HG+ K G +L DMY+KC SA F +++
Sbjct: 252 QLHGLVMKKEFQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMIN 311
Query: 223 ------------------SPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITF 264
PD +WN++I+ F+ G EA F +M+ + ++P
Sbjct: 312 GQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCL 371
Query: 265 LSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAIS- 323
SLL AC+ L G +IH +++K +++ + SL+ MY KC A +F+
Sbjct: 372 TSLLSACSDIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEP 431
Query: 324 KNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGN 383
K + V WN ++S +H + +F+ + + +P++ T T +L C+ ++E G+
Sbjct: 432 KPKDPVFWNVMISGYGKHGECESAIEIFELLREEKVEPSLATFTAVLSACSHCGNVEKGS 491
Query: 384 QV-HCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFD 422
Q+ + G +ID+ + G + A+ V D
Sbjct: 492 QIFRLMQEEYGYKPSTEHIGCMIDLLGRSGRLREAKEVID 531
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 127/491 (25%), Positives = 226/491 (46%), Gaps = 58/491 (11%)
Query: 156 YQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAK 215
+ PN+F + +C+ L + GR +H K G +VF+ +L MY K + A
Sbjct: 27 HSPNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDAL 86
Query: 216 TAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPM 275
++ + S NA ++ ++G +A +F G +S+T S+L C
Sbjct: 87 KVLDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGCGD-- 144
Query: 276 ALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAIL 335
+ GMQ+H +K GF EV + SL++MY++C A +FE + + ++V++NA +
Sbjct: 145 -IEGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVP-HKSVVTYNAFI 202
Query: 336 SACLQHKQAGETFRLFKQML-FSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGL 394
S +++ +F M FS +PN +T N + CA L +L+ G Q+H +K
Sbjct: 203 SGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEF 262
Query: 395 VLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENP-NVISWSSLIVGYAMSGLGHEALNLFR 453
+ V LIDMY+KC A VF ++ N+ISW+S+I G ++G A+ LF
Sbjct: 263 QFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFE 322
Query: 454 KMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARA 513
K+ + G++P+ T+ ++S S +G V E + + M + +P + C+ LL+
Sbjct: 323 KLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLK----CLTSLLSAC 378
Query: 514 GCLY-----------------EAETFI--------RKTG-----------FDP---DITT 534
++ E + F+ K G F+P D
Sbjct: 379 SDIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVF 438
Query: 535 WKTLLSSCKTHGN----VDIAERAAENILKLDPSNSAALVLLSSIHASAGNWEDVAKLRK 590
W ++S HG ++I E E K++PS + +LS+ + GN E +++ +
Sbjct: 439 WNVMISGYGKHGECESAIEIFELLREE--KVEPSLATFTAVLSAC-SHCGNVEKGSQIFR 495
Query: 591 VLDD--GYDPA 599
++ + GY P+
Sbjct: 496 LMQEEYGYKPS 506
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 93/200 (46%), Gaps = 4/200 (2%)
Query: 25 SWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTFGSIIKACCIAGDIYLGRQLHAHV 84
+W S+ISG+SQ G+ EA + +ML P S++ AC + G+++H HV
Sbjct: 335 TWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLKNGKEIHGHV 394
Query: 85 IKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMI--SIKDLISWSSMIRGFTQLGYEIE 142
IK+ + LI MY G + A +F KD + W+ MI G+ + G
Sbjct: 395 IKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMISGYGKHGECES 454
Query: 143 ALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGIC-AKFGLVRNVFSGCSL 201
A+ +F ++LR+ +P+ +V SACS E G QI + ++G + +
Sbjct: 455 AIEIF-ELLREEKVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQEEYGYKPSTEHIGCM 513
Query: 202 CDMYAKCGFLPSAKTAFYQI 221
D+ + G L AK Q+
Sbjct: 514 IDLLGRSGRLREAKEVIDQM 533
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 306 bits (785), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 174/526 (33%), Positives = 281/526 (53%), Gaps = 18/526 (3%)
Query: 79 QLHAHVIKSGFGGHLVAQNGLISMYTNFGQ---VAHASDVFTMISIKDLISWSSMIRGFT 135
QLH +IKS +++ + LI T + +++A VF I + W+SMIRG++
Sbjct: 24 QLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFESIDCPSVYIWNSMIRGYS 83
Query: 136 QLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNV 195
+AL +++MLR+G Y P+ F V ACS L + ++G +HG K G N+
Sbjct: 84 NSPNPDKALIFYQEMLRKG-YSPDYFTFPYVLKACSGLRDIQFGSCVHGFVVKTGFEVNM 142
Query: 196 FSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHI 255
+ L MY CG + F I ++V+W ++I+ F ++ ++AI FR+M
Sbjct: 143 YVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFREMQSN 202
Query: 256 GLIPDSITFLSLLCACTSPMALNQGMQIHSYI----------VKVGFNKEVALYNSLLTM 305
G+ + + LL AC + G H ++ KVGFN V L SL+ M
Sbjct: 203 GVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGFN--VILATSLIDM 260
Query: 306 YTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMIT 365
Y KC +L A +F+ + + LVSWN+I++ Q+ A E +F ML P+ +T
Sbjct: 261 YAKCGDLRTARYLFDGMPERT-LVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVT 319
Query: 366 ITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTE 425
+++ ++G +H + K+G V D ++ L++MYAK G A++ F+ E
Sbjct: 320 FLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLE 379
Query: 426 NPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLG-VRPNEVTYVGVLSACSHIGLVEEGW 484
+ I+W+ +I+G A G G+EAL++F++M+ G P+ +TY+GVL ACSHIGLVEEG
Sbjct: 380 KKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQ 439
Query: 485 NLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTLLSSCKT 544
+ M + G+ P EH+ CMVD+L+RAG EAE ++ P++ W LL+ C
Sbjct: 440 RYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKPNVNIWGALLNGCDI 499
Query: 545 HGNVDIAERAAENILKLDPSNSAALVLLSSIHASAGNWEDVAKLRK 590
H N+++ +R + + + S VLLS+I+A AG W DV +R+
Sbjct: 500 HENLELTDRIRSMVAEPEELGSGIYVLLSNIYAKAGRWADVKLIRE 545
Score = 237 bits (605), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 146/466 (31%), Positives = 234/466 (50%), Gaps = 17/466 (3%)
Query: 11 ARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTFGSIIKACCI 70
AR VF+++ +V W SMI GYS + ++A++ Y +MLR G+ PD TF ++KAC
Sbjct: 60 ARSVFESIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSG 119
Query: 71 AGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIKDLISWSSM 130
DI G +H V+K+GF ++ L+ MY G+V + VF I ++++W S+
Sbjct: 120 LRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSL 179
Query: 131 IRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFG 190
I GF +A+ FR+M GV + NE ++ + AC + G+ HG G
Sbjct: 180 ISGFVNNNRFSDAIEAFREMQSNGV-KANETIMVDLLVACGRCKDIVTGKWFHGFLQGLG 238
Query: 191 LVR--------NVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDA 242
NV SL DMYAKCG L +A+ F + LVSWN+II ++ +GDA
Sbjct: 239 FDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDA 298
Query: 243 NEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSL 302
EA+ +F M+ +G+ PD +TFLS++ A G IH+Y+ K GF K+ A+ +L
Sbjct: 299 EEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCAL 358
Query: 303 LTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSEN-KP 361
+ MY K + A FE + K + ++W ++ H E +F++M N P
Sbjct: 359 VNMYAKTGDAESAKKAFEDLEKK-DTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATP 417
Query: 362 NMITITNLLGTCAELASLEVGNQVHC-FSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRV 420
+ IT +L C+ + +E G + GL V ++D+ ++ G A+R+
Sbjct: 418 DGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERL 477
Query: 421 FDSTE-NPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEV 465
+ PNV W +L+ G + HE L L ++R++ P E+
Sbjct: 478 VKTMPVKPNVNIWGALLNGCDI----HENLELTDRIRSMVAEPEEL 519
Score = 169 bits (428), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 110/365 (30%), Positives = 182/365 (49%), Gaps = 21/365 (5%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
MY CG + +VF+ + NVV+W S+ISG+ N + ++A+ + +M +G ++
Sbjct: 151 MYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFREMQSNGVKANETI 210
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSGF--------GGHLVAQNGLISMYTNFGQVAHA 112
++ AC DI G+ H + GF G +++ LI MY G + A
Sbjct: 211 MVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTA 270
Query: 113 SDVFTMISIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSA--- 169
+F + + L+SW+S+I G++Q G EAL +F DML G+ P++ SV A
Sbjct: 271 RYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGI-APDKVTFLSVIRASMI 329
Query: 170 --CSSLLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLV 227
CS L G+ IH +K G V++ C+L +MYAK G SAK AF +E D +
Sbjct: 330 QGCSQL-----GQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKKDTI 384
Query: 228 SWNAIIAAFADSGDANEAISIFRQMMHIG-LIPDSITFLSLLCACTSPMALNQGMQIHSY 286
+W +I A G NEA+SIF++M G PD IT+L +L AC+ + +G + +
Sbjct: 385 AWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRYFAE 444
Query: 287 IVKV-GFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAG 345
+ + G V Y ++ + ++ +A + + + N+ W A+L+ C H+
Sbjct: 445 MRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKPNVNIWGALLNGCDIHENLE 504
Query: 346 ETFRL 350
T R+
Sbjct: 505 LTDRI 509
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 66/127 (51%), Gaps = 6/127 (4%)
Query: 360 KPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVI---H 416
K + I + L C L L NQ+H +KS ++ +V + LID C + +
Sbjct: 3 KKHYKPILSQLENCRSLVEL---NQLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSY 59
Query: 417 AQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSH 476
A+ VF+S + P+V W+S+I GY+ S +AL +++M G P+ T+ VL ACS
Sbjct: 60 ARSVFESIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSG 119
Query: 477 IGLVEEG 483
+ ++ G
Sbjct: 120 LRDIQFG 126
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 306 bits (784), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 168/470 (35%), Positives = 264/470 (56%), Gaps = 4/470 (0%)
Query: 127 WSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGIC 186
W+ +R E++ L+R MLR G P+ F + +C+SL P G+Q+H
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSG-SSPDAFSFPFILKSCASLSLPVSGQQLHCHV 79
Query: 187 AKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQ-IESPDL-VSWNAIIAAFADSGDANE 244
K G F +L MY KCG + A+ F + +S L V +NA+I+ + + +
Sbjct: 80 TKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTD 139
Query: 245 AISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLT 304
A +FR+M G+ DS+T L L+ CT P L G +H VK G + EVA+ NS +T
Sbjct: 140 AAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFIT 199
Query: 305 MYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMI 364
MY KC ++ +F+ + L++WNA++S Q+ A + L++QM S P+
Sbjct: 200 MYMKCGSVEAGRRLFDEMPVKG-LITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPF 258
Query: 365 TITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDST 424
T+ ++L +CA L + ++G++V +G V +V VSN I MYA+CG++ A+ VFD
Sbjct: 259 TLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIM 318
Query: 425 ENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGW 484
+++SW+++I Y M G+G L LF M G+RP+ +V VLSACSH GL ++G
Sbjct: 319 PVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGL 378
Query: 485 NLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTLLSSCKT 544
L+ M+ E + P EH+SC+VDLL RAG L EA FI +PD W LL +CK
Sbjct: 379 ELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKI 438
Query: 545 HGNVDIAERAAENILKLDPSNSAALVLLSSIHASAGNWEDVAKLRKVLDD 594
H NVD+AE A +++ +P+N VL+S+I++ + N E + ++R ++ +
Sbjct: 439 HKNVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRE 488
Score = 178 bits (452), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 108/371 (29%), Positives = 183/371 (49%), Gaps = 14/371 (3%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVS--WTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQ 58
MY KCG + DAR+VF+ + +S + ++ISGY+ N + +A M+ +M +G D
Sbjct: 97 MYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETGVSVDS 156
Query: 59 LTFGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTM 118
+T ++ C + ++LGR LH +K G + N I+MY G V +F
Sbjct: 157 VTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDE 216
Query: 119 ISIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEY 178
+ +K LI+W+++I G++Q G + L L+ M GV P+ F L SV S+C+ L +
Sbjct: 217 MPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVC-PDPFTLVSVLSSCAHLGAKKI 275
Query: 179 GRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFAD 238
G ++ + G V NVF + MYA+CG L A+ F + LVSW A+I +
Sbjct: 276 GHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGM 335
Query: 239 SGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQI-----HSYIVKVGFN 293
G + +F M+ G+ PD F+ +L AC+ ++G+++ Y ++ G
Sbjct: 336 HGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPE 395
Query: 294 KEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQ 353
Y+ L+ + + L +A+ E++ + W A+L AC HK F +
Sbjct: 396 H----YSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAELAFAK 451
Query: 354 MLFSENKPNMI 364
++ E +PN I
Sbjct: 452 VI--EFEPNNI 460
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 132/463 (28%), Positives = 213/463 (46%), Gaps = 17/463 (3%)
Query: 40 NEAVVMYIQMLRSGFFPDQLTFGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGL 99
+E++ +Y MLRSG PD +F I+K+C G+QLH HV K G L
Sbjct: 35 SESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVTKGGCETEPFVLTAL 94
Query: 100 ISMYTNFGQVAHASDVFTMISIKDLIS--WSSMIRGFTQLGYEIEALYLFRDMLRQGVYQ 157
ISMY G VA A VF +S ++++I G+T +A Y+FR M GV
Sbjct: 95 ISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETGVSV 154
Query: 158 PNEFVLGSVFSACSSLLEPEY---GRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSA 214
+ +LG V C+ PEY GR +HG C K GL V S MY KCG + +
Sbjct: 155 DSVTMLGLV-PLCTV---PEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAG 210
Query: 215 KTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSP 274
+ F ++ L++WNA+I+ ++ +G A + + ++ QM G+ PD T +S+L +C
Sbjct: 211 RRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHL 270
Query: 275 MALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAI 334
A G ++ + GF V + N+ ++MY +C NL A +VF+ I +LVSW A+
Sbjct: 271 GAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFD-IMPVKSLVSWTAM 329
Query: 335 LSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGL 394
+ H LF M+ +P+ +L C+ + G ++ ++K
Sbjct: 330 IGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELF-RAMKREY 388
Query: 395 VLDVSVSN--GLIDMYAKCGSVIHAQRVFDSTE-NPNVISWSSLIVGYAMSGLGHEALNL 451
L+ + L+D+ + G + A +S P+ W +L+ + A
Sbjct: 389 KLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAELA 448
Query: 452 FRKMRNLGVRPNEVTYVGVLSACSHIGLVEEG-WNLYNTMEEE 493
F K+ + PN + Y ++S +EG W + M E
Sbjct: 449 FAKV--IEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRER 489
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 303 bits (777), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 179/574 (31%), Positives = 288/574 (50%), Gaps = 39/574 (6%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
+YG+ ++ A QVF+ M +++ +W M+S G E + + +++R G + +
Sbjct: 158 LYGRLDLLEMAEQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESS 217
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMIS 120
F ++K D+ + +QLH K G + N LIS Y G A +F
Sbjct: 218 FLGVLKGVSCVKDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAG 277
Query: 121 IKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGR 180
D++SW+++I + ++AL LF M G + PN+ SV S + GR
Sbjct: 278 SWDIVSWNAIICATAKSENPLKALKLFVSMPEHG-FSPNQGTYVSVLGVSSLVQLLSCGR 336
Query: 181 QIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSG 240
QIHG+ K G + G +L D YAKCG L ++ F I ++V WNA+++ +A+
Sbjct: 337 QIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYANK- 395
Query: 241 DANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYN 300
D +S+F QM+ +G P TF + L +C + + Q+HS IV++G+ + +
Sbjct: 396 DGPICLSLFLQMLQMGFRPTEYTFSTALKSC----CVTELQQLHSVIVRMGYEDNDYVLS 451
Query: 301 SLLTMYTKCSNLHDALSVFEAIS-------------------------------KNANLV 329
SL+ Y K ++DAL + + S + + V
Sbjct: 452 SLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTV 511
Query: 330 SWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFS 389
SWN ++AC + E LFK ML S +P+ T ++L C++L L +G+ +H
Sbjct: 512 SWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLI 571
Query: 390 VKSGL-VLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEA 448
K+ D V N LIDMY KCGS+ +VF+ T N+I+W++LI + G G EA
Sbjct: 572 TKTDFSCADTFVCNVLIDMYGKCGSIRSVMKVFEETREKNLITWTALISCLGIHGYGQEA 631
Query: 449 LNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVD 508
L F++ +LG +P+ V+++ +L+AC H G+V+EG L+ M ++ G+ P +H+ C VD
Sbjct: 632 LEKFKETLSLGFKPDRVSFISILTACRHGGMVKEGMGLFQKM-KDYGVEPEMDHYRCAVD 690
Query: 509 LLARAGCLYEAETFIRKTGFDPDITTWKTLLSSC 542
LLAR G L EAE IR+ F D W+T L C
Sbjct: 691 LLARNGYLKEAEHLIREMPFPADAPVWRTFLDGC 724
Score = 215 bits (548), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 172/641 (26%), Positives = 290/641 (45%), Gaps = 61/641 (9%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
+Y K G + A +VFD M RN VS+ ++I GYS+ G ++A ++ +M G+ P+Q T
Sbjct: 58 LYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQST 117
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSG-FGGHLVAQNGLISMYTNFGQVAHASDVFTMI 119
++ C + D+ G QLH +K G F L+ +Y + A VF +
Sbjct: 118 VSGLLS--CASLDVRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDM 175
Query: 120 SIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYG 179
K L +W+ M+ G+ E ++ FR+++R G LG V S + + +
Sbjct: 176 PFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLG-VLKGVSCVKDLDIS 234
Query: 180 RQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADS 239
+Q+H K GL + SL Y KCG A+ F S D+VSWNAII A A S
Sbjct: 235 KQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKS 294
Query: 240 GDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALY 299
+ +A+ +F M G P+ T++S+L + L+ G QIH ++K G + L
Sbjct: 295 ENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLG 354
Query: 300 NSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSEN 359
N+L+ Y KC NL D+ F+ I ++ N+V WNA+LS +K LF QML
Sbjct: 355 NALIDFYAKCGNLEDSRLCFDYI-RDKNIVCWNALLSG-YANKDGPICLSLFLQMLQMGF 412
Query: 360 KPNMITITNLLGTCAELASLEVGNQVHCFSVKSG-------------------------L 394
+P T + L +C + L+ Q+H V+ G L
Sbjct: 413 RPTEYTFSTALKSCC-VTELQ---QLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALL 468
Query: 395 VLD-------VSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHE 447
+LD V N + +Y++ G + ++ + E P+ +SW+ I + S E
Sbjct: 469 LLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEE 528
Query: 448 ALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSC-- 505
+ LF+ M +RP++ T+V +LS CS + + G +++ + + FSC
Sbjct: 529 VIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLI--------TKTDFSCAD 580
Query: 506 ------MVDLLARAGCLYEAETFIRKTGFDPDITTWKTLLSSCKTHG-NVDIAERAAENI 558
++D+ + G + +T + ++ TW L+S HG + E+ E +
Sbjct: 581 TFVCNVLIDMYGKCGSIRSVMKVFEETR-EKNLITWTALISCLGIHGYGQEALEKFKETL 639
Query: 559 -LKLDPSNSAALVLLSSIHASAGNWEDVAKLRKVLDDGYDP 598
L P + + +L++ E + +K+ D G +P
Sbjct: 640 SLGFKPDRVSFISILTACRHGGMVKEGMGLFQKMKDYGVEP 680
Score = 189 bits (481), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 114/379 (30%), Positives = 201/379 (53%), Gaps = 6/379 (1%)
Query: 97 NGLISMYTNFGQVAHASDVFTMISIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVY 156
N +IS+Y G+V+ A VF + ++ +S++++I+G+++ G +A +F +M G Y
Sbjct: 53 NNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFG-Y 111
Query: 157 QPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGL-VRNVFSGCSLCDMYAKCGFLPSAK 215
PN+ + + S S L+ G Q+HG+ K+GL + + F G L +Y + L A+
Sbjct: 112 LPNQSTVSGLLSCAS--LDVRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAE 169
Query: 216 TAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPM 275
F + L +WN +++ G E + FR+++ +G +FL +L +
Sbjct: 170 QVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVK 229
Query: 276 ALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAIL 335
L+ Q+H K G + E+++ NSL++ Y KC N H A +F+ + + ++VSWNAI+
Sbjct: 230 DLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQD-AGSWDIVSWNAII 288
Query: 336 SACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLV 395
A + + + +LF M PN T ++LG + + L G Q+H +K+G
Sbjct: 289 CATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCE 348
Query: 396 LDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKM 455
+ + N LID YAKCG++ ++ FD + N++ W++L+ GYA G L+LF +M
Sbjct: 349 TGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYANKD-GPICLSLFLQM 407
Query: 456 RNLGVRPNEVTYVGVLSAC 474
+G RP E T+ L +C
Sbjct: 408 LQMGFRPTEYTFSTALKSC 426
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 108/378 (28%), Positives = 179/378 (47%), Gaps = 36/378 (9%)
Query: 170 CSSLLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSW 229
CS LL+P Y +C N+ S +Y K G + A F Q+ + VS+
Sbjct: 42 CSVLLQPVY------VC------NNIIS------LYEKLGEVSLAGKVFDQMPERNKVSF 83
Query: 230 NAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVK 289
N II ++ GD ++A +F +M + G +P+ T LL +C S + + G Q+H +K
Sbjct: 84 NTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLL-SCAS-LDVRAGTQLHGLSLK 141
Query: 290 VG-FNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETF 348
G F + + LL +Y + L A VFE + + L +WN ++S E
Sbjct: 142 YGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKS-LETWNHMMSLLGHRGFLKECM 200
Query: 349 RLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMY 408
F++++ + +L + + L++ Q+HC + K GL ++SV N LI Y
Sbjct: 201 FFFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSATKKGLDCEISVVNSLISAY 260
Query: 409 AKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYV 468
KCG+ A+R+F + +++SW+++I A S +AL LF M G PN+ TYV
Sbjct: 261 GKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEHGFSPNQGTYV 320
Query: 469 GVLSACSHIGLVEEGWNLYNTMEE---ELGIPPAREHFSCMVDLLARAGCLYEAE---TF 522
VL S + L+ G ++ + + E GI + ++D A+ G L ++ +
Sbjct: 321 SVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLG----NALIDFYAKCGNLEDSRLCFDY 376
Query: 523 IRKTGFDPDITTWKTLLS 540
IR D +I W LLS
Sbjct: 377 IR----DKNIVCWNALLS 390
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 85/178 (47%), Gaps = 7/178 (3%)
Query: 366 ITNLLGTCAELASLEVGNQVHCFSVK--SGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDS 423
+ +LL C + S +H S+ S L+ V V N +I +Y K G V A +VFD
Sbjct: 15 VVSLLNVCRKAPSFARTKALHALSITLCSVLLQPVYVCNNIISLYEKLGEVSLAGKVFDQ 74
Query: 424 TENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEG 483
N +S++++I GY+ G +A +F +MR G PN+ T G+LS C+ + V G
Sbjct: 75 MPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLLS-CASLD-VRAG 132
Query: 484 WNLYNTMEEELGIPPAREHF-SCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTLLS 540
L+ + + G+ A +C++ L R L AE F + TW ++S
Sbjct: 133 TQLHG-LSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPF-KSLETWNHMMS 188
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 303 bits (776), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 162/424 (38%), Positives = 256/424 (60%), Gaps = 9/424 (2%)
Query: 180 RQIHGICAKFGL-VRNVFSGCSLCDMYAKCGFLPS---AKTAFYQIESP-DLVSWNAIIA 234
RQIH + G+ + + G L P A F +IE P ++ WN +I
Sbjct: 34 RQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINVFIWNTLIR 93
Query: 235 AFADSGDANEAISIFRQMMHIGLI-PDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFN 293
+A+ G++ A S++R+M GL+ PD+ T+ L+ A T+ + G IHS +++ GF
Sbjct: 94 GYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRSGFG 153
Query: 294 KEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQ 353
+ + NSLL +Y C ++ A VF+ + + +LV+WN++++ ++ + E L+ +
Sbjct: 154 SLIYVQNSLLHLYANCGDVASAYKVFDKMPEK-DLVAWNSVINGFAENGKPEEALALYTE 212
Query: 354 MLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGS 413
M KP+ TI +LL CA++ +L +G +VH + +K GL ++ SN L+D+YA+CG
Sbjct: 213 MNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGR 272
Query: 414 VIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNL-GVRPNEVTYVGVLS 472
V A+ +FD + N +SW+SLIVG A++G G EA+ LF+ M + G+ P E+T+VG+L
Sbjct: 273 VEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILY 332
Query: 473 ACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDI 532
ACSH G+V+EG+ + M EE I P EHF CMVDLLARAG + +A +I+ P++
Sbjct: 333 ACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNV 392
Query: 533 TTWKTLLSSCKTHGNVDIAERAAENILKLDPSNSAALVLLSSIHASAGNWEDVAKLRK-V 591
W+TLL +C HG+ D+AE A IL+L+P++S VLLS+++AS W DV K+RK +
Sbjct: 393 VIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQM 452
Query: 592 LDDG 595
L DG
Sbjct: 453 LRDG 456
Score = 192 bits (489), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 111/338 (32%), Positives = 180/338 (53%), Gaps = 5/338 (1%)
Query: 8 MKDARQVFDAMHLR-NVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFF-PDQLTFGSII 65
M A +VF + NV W ++I GY++ G A +Y +M SG PD T+ +I
Sbjct: 69 MSYAHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLI 128
Query: 66 KACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIKDLI 125
KA D+ LG +H+ VI+SGFG + QN L+ +Y N G VA A VF + KDL+
Sbjct: 129 KAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLV 188
Query: 126 SWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGI 185
+W+S+I GF + G EAL L+ +M +G+ +P+ F + S+ SAC+ + G+++H
Sbjct: 189 AWNSVINGFAENGKPEEALALYTEMNSKGI-KPDGFTIVSLLSACAKIGALTLGKRVHVY 247
Query: 186 CAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEA 245
K GL RN+ S L D+YA+CG + AKT F ++ + VSW ++I A +G EA
Sbjct: 248 MIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEA 307
Query: 246 ISIFRQMMHI-GLIPDSITFLSLLCACTSPMALNQGMQIHSYIV-KVGFNKEVALYNSLL 303
I +F+ M GL+P ITF+ +L AC+ + +G + + + + + ++
Sbjct: 308 IELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMV 367
Query: 304 TMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQH 341
+ + + A +++ N+V W +L AC H
Sbjct: 368 DLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVH 405
Score = 169 bits (428), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 113/399 (28%), Positives = 204/399 (51%), Gaps = 21/399 (5%)
Query: 78 RQLHAHVIKSG-------FGGHLVAQNGLISMYTNFGQVAHASDVFTMISIK-DLISWSS 129
RQ+HA I+ G G HL+ L+S+ + +++A VF+ I ++ W++
Sbjct: 34 RQIHAFSIRHGVSISDAELGKHLIFY--LVSLPSP-PPMSYAHKVFSKIEKPINVFIWNT 90
Query: 130 MIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKF 189
+IRG+ ++G I A L+R+M G+ +P+ + A +++ + G IH + +
Sbjct: 91 LIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRS 150
Query: 190 GLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIF 249
G ++ SL +YA CG + SA F ++ DLV+WN++I FA++G EA++++
Sbjct: 151 GFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALY 210
Query: 250 RQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKC 309
+M G+ PD T +SLL AC AL G ++H Y++KVG + + N LL +Y +C
Sbjct: 211 TEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARC 270
Query: 310 SNLHDALSVF-EAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSEN-KPNMITIT 367
+ +A ++F E + KN+ VSW +++ + E LFK M +E P IT
Sbjct: 271 GRVEEAKTLFDEMVDKNS--VSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFV 328
Query: 368 NLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSN--GLIDMYAKCGSVIHAQRVFDSTE 425
+L C+ ++ G + + ++ ++ + + ++D+ A+ G V A S
Sbjct: 329 GILYACSHCGMVKEGFE-YFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMP 387
Query: 426 -NPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPN 463
PNV+ W +L+ A + G L F +++ L + PN
Sbjct: 388 MQPNVVIWRTLLG--ACTVHGDSDLAEFARIQILQLEPN 424
Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 134/253 (52%), Gaps = 14/253 (5%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
+Y CG + A +VFD M +++V+W S+I+G+++NG+ EA+ +Y +M G PD T
Sbjct: 165 LYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFT 224
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMIS 120
S++ AC G + LG+++H ++IK G +L + N L+ +Y G+V A +F +
Sbjct: 225 IVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMV 284
Query: 121 IKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACS--SLLEP-- 176
K+ +SW+S+I G G+ EA+ LF+ M P E + ACS +++
Sbjct: 285 DKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGF 344
Query: 177 EYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIES----PDLVSWNAI 232
EY R++ ++ + + + D+ A+ G K A+ I+S P++V W +
Sbjct: 345 EYFRRMR---EEYKIEPRIEHFGCMVDLLARAG---QVKKAYEYIKSMPMQPNVVIWRTL 398
Query: 233 IAAFADSGDANEA 245
+ A GD++ A
Sbjct: 399 LGACTVHGDSDLA 411
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 303 bits (775), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 155/443 (34%), Positives = 251/443 (56%), Gaps = 3/443 (0%)
Query: 153 QGVYQP-NEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFL 211
+G Y P + ++ C+ GR +H + ++ G +L +MYAKCG L
Sbjct: 52 EGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSL 111
Query: 212 PSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCAC 271
A+ F ++ D V+W +I+ ++ +A+ F QM+ G P+ T S++ A
Sbjct: 112 EEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAA 171
Query: 272 TSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSW 331
+ G Q+H + VK GF+ V + ++LL +YT+ + DA VF+A+ ++ N VSW
Sbjct: 172 AAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDAL-ESRNDVSW 230
Query: 332 NAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVK 391
NA+++ + + LF+ ML +P+ + +L G C+ LE G VH + +K
Sbjct: 231 NALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIK 290
Query: 392 SGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNL 451
SG L N L+DMYAK GS+ A+++FD +V+SW+SL+ YA G G EA+
Sbjct: 291 SGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWW 350
Query: 452 FRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLA 511
F +MR +G+RPNE++++ VL+ACSH GL++EGW+ Y M+++ GI P H+ +VDLL
Sbjct: 351 FEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKD-GIVPEAWHYVTVVDLLG 409
Query: 512 RAGCLYEAETFIRKTGFDPDITTWKTLLSSCKTHGNVDIAERAAENILKLDPSNSAALVL 571
RAG L A FI + +P WK LL++C+ H N ++ AAE++ +LDP + V+
Sbjct: 410 RAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVI 469
Query: 572 LSSIHASAGNWEDVAKLRKVLDD 594
L +I+AS G W D A++RK + +
Sbjct: 470 LYNIYASGGRWNDAARVRKKMKE 492
Score = 233 bits (595), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 121/342 (35%), Positives = 197/342 (57%), Gaps = 1/342 (0%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
MY KCGS+++AR+VF+ M R+ V+WT++ISGYSQ+ + +A++ + QMLR G+ P++ T
Sbjct: 104 MYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFT 163
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMIS 120
S+IKA G QLH +K GF ++ + L+ +YT +G + A VF +
Sbjct: 164 LSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALE 223
Query: 121 IKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGR 180
++ +SW+++I G + +AL LF+ MLR G ++P+ F S+F ACSS E G+
Sbjct: 224 SRNDVSWNALIAGHARRSGTEKALELFQGMLRDG-FRPSHFSYASLFGACSSTGFLEQGK 282
Query: 181 QIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSG 240
+H K G F+G +L DMYAK G + A+ F ++ D+VSWN+++ A+A G
Sbjct: 283 WVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHG 342
Query: 241 DANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYN 300
EA+ F +M +G+ P+ I+FLS+L AC+ L++G + + K G E Y
Sbjct: 343 FGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYV 402
Query: 301 SLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHK 342
+++ + + +L+ AL E + W A+L+AC HK
Sbjct: 403 TVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHK 444
Score = 223 bits (568), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 127/390 (32%), Positives = 207/390 (53%), Gaps = 6/390 (1%)
Query: 50 LRSGFFP-DQLTFGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQ 108
L + P D+ + +++K C + + GR +HAH+++S F +V N L++MY G
Sbjct: 51 LEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGS 110
Query: 109 VAHASDVFTMISIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFS 168
+ A VF + +D ++W+++I G++Q +AL F MLR G Y PNEF L SV
Sbjct: 111 LEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFG-YSPNEFTLSSVIK 169
Query: 169 ACSSLLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVS 228
A ++ G Q+HG C K G NV G +L D+Y + G + A+ F +ES + VS
Sbjct: 170 AAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVS 229
Query: 229 WNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIV 288
WNA+IA A +A+ +F+ M+ G P ++ SL AC+S L QG +H+Y++
Sbjct: 230 WNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMI 289
Query: 289 KVGFNKEVALY-NSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGET 347
K G K VA N+LL MY K ++HDA +F+ ++K ++VSWN++L+A QH E
Sbjct: 290 KSG-EKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKR-DVVSWNSLLTAYAQHGFGKEA 347
Query: 348 FRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDM 407
F++M +PN I+ ++L C+ L+ G + K G+V + ++D+
Sbjct: 348 VWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDL 407
Query: 408 YAKCGSVIHAQRVFDSTE-NPNVISWSSLI 436
+ G + A R + P W +L+
Sbjct: 408 LGRAGDLNRALRFIEEMPIEPTAAIWKALL 437
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 301 bits (770), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 171/599 (28%), Positives = 308/599 (51%), Gaps = 46/599 (7%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
MYGKCG + DA +VFD + RN V+W +++ GY QNG+ EA+ ++ M + G P ++T
Sbjct: 217 MYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVT 276
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMIS 120
+ + A G + G+Q HA I +G + L++ Y G + +A VF +
Sbjct: 277 VSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMF 336
Query: 121 IKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGR 180
KD+++W+ +I G+ Q G +A+Y+ + ++R + + L ++ SA + + G+
Sbjct: 337 EKDVVTWNLIISGYVQQGLVEDAIYMCQ-LMRLEKLKYDCVTLATLMSAAARTENLKLGK 395
Query: 181 QIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSG 240
++ C + ++ ++ DMYAKCG + AK F DL+ WN ++AA+A+SG
Sbjct: 396 EVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESG 455
Query: 241 DANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYN 300
+ EA+ +F M G+ P+ IT +N
Sbjct: 456 LSGEALRLFYGMQLEGVPPNVIT-----------------------------------WN 480
Query: 301 SLLTMYTKCSNLHDALSVFEAISKNA---NLVSWNAILSACLQHKQAGETFRLFKQMLFS 357
++ + + +A +F + + NL+SW +++ +Q+ + E ++M S
Sbjct: 481 LIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQES 540
Query: 358 ENKPNMITITNLLGTCAELASLEVGNQVHCFSVK----SGLVLDVSVSNGLIDMYAKCGS 413
+PN +IT L CA LASL +G +H + ++ S LV S+ L+DMYAKCG
Sbjct: 541 GLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLV---SIETSLVDMYAKCGD 597
Query: 414 VIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSA 473
+ A++VF S + +++I YA+ G EA+ L+R + +G++P+ +T VLSA
Sbjct: 598 INKAEKVFGSKLYSELPLSNAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSA 657
Query: 474 CSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDIT 533
C+H G + + ++ + + + P EH+ MVDLLA AG +A I + F PD
Sbjct: 658 CNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRLIEEMPFKPDAR 717
Query: 534 TWKTLLSSCKTHGNVDIAERAAENILKLDPSNSAALVLLSSIHASAGNWEDVAKLRKVL 592
++L++SC ++ + + +L+ +P NS V +S+ +A G+W++V K+R+++
Sbjct: 718 MIQSLVASCNKQRKTELVDYLSRKLLESEPENSGNYVTISNAYAVEGSWDEVVKMREMM 776
Score = 259 bits (663), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 160/533 (30%), Positives = 282/533 (52%), Gaps = 16/533 (3%)
Query: 19 HLRNVVSWTSMISGYSQNGQGNEAVVMYIQM----LRSGFFPDQLTFGSIIKACCIAGDI 74
H + S+ +S +NG+ EA+ + +M LR G P+ +G I++ C D+
Sbjct: 31 HSPSSTSYFHRVSSLCKNGEIKEALSLVTEMDFRNLRIG--PE--IYGEILQGCVYERDL 86
Query: 75 YLGRQLHAHVIKSG--FGGHLVAQNGLISMYTNFGQVAHASDVFTMISIKDLISWSSMIR 132
G+Q+HA ++K+G + + + L+ Y + A +F+ + ++++ SW+++I
Sbjct: 87 STGKQIHARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIG 146
Query: 133 GFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLV 192
++G AL F +ML ++ P+ FV+ +V AC +L +GR +HG K GL
Sbjct: 147 VKCRIGLCEGALMGFVEMLENEIF-PDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLE 205
Query: 193 RNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQM 252
VF SL DMY KCG L A F +I + V+WNA++ + +G EAI +F M
Sbjct: 206 DCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDM 265
Query: 253 MHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNL 312
G+ P +T + L A + + +G Q H+ + G + L SLL Y K +
Sbjct: 266 RKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLI 325
Query: 313 HDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGT 372
A VF+ + + ++V+WN I+S +Q + + + M + K + +T+ L+
Sbjct: 326 EYAEMVFDRMFEK-DVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSA 384
Query: 373 CAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISW 432
A +L++G +V C+ ++ D+ +++ ++DMYAKCGS++ A++VFDST ++I W
Sbjct: 385 AARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILW 444
Query: 433 SSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEE 492
++L+ YA SGL EAL LF M+ GV PN +T+ ++ + G V+E +++ M+
Sbjct: 445 NTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQS 504
Query: 493 ELGIPPAREHFSCMVDLLARAGCLYEAETFIRK---TGFDPDITTWKTLLSSC 542
GI P ++ M++ + + GC EA F+RK +G P+ + LS+C
Sbjct: 505 S-GIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSAC 556
Score = 230 bits (586), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 167/642 (26%), Positives = 291/642 (45%), Gaps = 81/642 (12%)
Query: 2 YGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTF 61
Y KC +++ A +F + +RNV SW ++I + G A++ +++ML + FPD
Sbjct: 117 YAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVV 176
Query: 62 GSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISI 121
++ KAC GR +H +V+KSG + + L MY G + AS VF I
Sbjct: 177 PNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPD 236
Query: 122 KDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQ 181
++ ++W++++ G+ Q G EA+ LF DM +QGV +P + + SA +++ E G+Q
Sbjct: 237 RNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGV-EPTRVTVSTCLSASANMGGVEEGKQ 295
Query: 182 IHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGD 241
H I G+ + G SL + Y K G + A+ F ++ D+V+WN II+ + G
Sbjct: 296 SHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGL 355
Query: 242 ANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNS 301
+AI + + M L D +T +L+ A L G ++ Y ++ F ++ L ++
Sbjct: 356 VEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLAST 415
Query: 302 LLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKP 361
++ MY KC ++ DA VF++ + +L+ WN +L+A + +GE RLF M P
Sbjct: 416 VMDMYAKCGSIVDAKKVFDSTVEK-DLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPP 474
Query: 362 NMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVF 421
N+IT L++ + NG +D A+ +F
Sbjct: 475 NVITWN--------------------------LIILSLLRNGQVD---------EAKDMF 499
Query: 422 DSTEN----PNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHI 477
++ PN+ISW++++ G +G EA+ RKM+ G+RPN + LSAC+H+
Sbjct: 500 LQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHL 559
Query: 478 GLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETF--------------- 522
+ G ++ + L + +VD+ A+ G + +AE
Sbjct: 560 ASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLSNAM 619
Query: 523 -------------------IRKTGFDPDITTWKTLLSSCKTHGNVDIAERAAENILKLDP 563
+ G PD T +LS+C G+++ A +I+
Sbjct: 620 ISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQAIEIFTDIVS-KR 678
Query: 564 SNSAALV---LLSSIHASAGNWEDVAKLRKVLDDGYDPAQRL 602
S L L+ + ASAG E LR + + + P R+
Sbjct: 679 SMKPCLEHYGLMVDLLASAGETEKA--LRLIEEMPFKPDARM 718
Score = 149 bits (375), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 106/347 (30%), Positives = 166/347 (47%), Gaps = 15/347 (4%)
Query: 212 PSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCAC 271
PS+K Q SP S+ +++ +G+ EA+S+ +M L + +L C
Sbjct: 21 PSSKHHDEQAHSPSSTSYFHRVSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGC 80
Query: 272 TSPMALNQGMQIHSYIVKVG--FNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLV 329
L+ G QIH+ I+K G + + + L+ Y KC L A +F + + N+
Sbjct: 81 VYERDLSTGKQIHARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKL-RVRNVF 139
Query: 330 SWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFS 389
SW AI+ + F +ML +E P+ + N+ C L G VH +
Sbjct: 140 SWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYV 199
Query: 390 VKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEAL 449
VKSGL V V++ L DMY KCG + A +VFD + N ++W++L+VGY +G EA+
Sbjct: 200 VKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAI 259
Query: 450 NLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWN-----LYNTMEEELGIPPAREHFS 504
LF MR GV P VT LSA +++G VEEG + N ME + + + +F
Sbjct: 260 RLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFY 319
Query: 505 CMVDLLARAGCLYEAETFIRKTGFDPDITTWKTLLSSCKTHGNVDIA 551
C V L+ A +++ F+ D+ TW ++S G V+ A
Sbjct: 320 CKVGLIEYAEMVFD-------RMFEKDVVTWNLIISGYVQQGLVEDA 359
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 301 bits (770), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 170/512 (33%), Positives = 278/512 (54%), Gaps = 39/512 (7%)
Query: 77 GRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIKDLISWSSMIRGFTQ 136
GR LHAH++ SG L++ Y G+V A VF + +D+ MI +
Sbjct: 35 GRVLHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGACAR 94
Query: 137 LGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVF 196
GY E+L FR+M + G+ + + F++ S+ A +LL+ E+G+ IH + KF + F
Sbjct: 95 NGYYQESLDFFREMYKDGL-KLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESDAF 153
Query: 197 SGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIG 256
SL DMY+K G + +A+ F + DLV +NA+I+ +A++ A+EA+++ + M +G
Sbjct: 154 IVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLG 213
Query: 257 LIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDAL 316
+ PD IT +N+L++ ++ N
Sbjct: 214 IKPDVIT-----------------------------------WNALISGFSHMRNEEKVS 238
Query: 317 SVFEAISKNA---NLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTC 373
+ E + + ++VSW +I+S + + Q + F FKQML PN TI LL C
Sbjct: 239 EILELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPAC 298
Query: 374 AELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWS 433
LA ++ G ++H +SV +GL V + L+DMY KCG + A +F T ++++
Sbjct: 299 TTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKKTTVTFN 358
Query: 434 SLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEE 493
S+I YA GL +A+ LF +M G + + +T+ +L+ACSH GL + G NL+ M+ +
Sbjct: 359 SMIFCYANHGLADKAVELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFLLMQNK 418
Query: 494 LGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTLLSSCKTHGNVDIAER 553
I P EH++CMVDLL RAG L EA I+ +PD+ W LL++C+ HGN+++A
Sbjct: 419 YRIVPRLEHYACMVDLLGRAGKLVEAYEMIKAMRMEPDLFVWGALLAACRNHGNMELARI 478
Query: 554 AAENILKLDPSNSAALVLLSSIHASAGNWEDV 585
AA+++ +L+P NS +LL+S++A+AG+WE V
Sbjct: 479 AAKHLAELEPENSGNGLLLTSLYANAGSWESV 510
Score = 166 bits (419), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 113/437 (25%), Positives = 202/437 (46%), Gaps = 35/437 (8%)
Query: 2 YGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTF 61
Y +CG + DAR+VFD M R++ MI ++NG E++ + +M + G D
Sbjct: 61 YVECGKVLDARKVFDEMPKRDISGCVVMIGACARNGYYQESLDFFREMYKDGLKLDAFIV 120
Query: 62 GSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISI 121
S++KA D G+ +H V+K + + LI MY+ FG+V +A VF+ +
Sbjct: 121 PSLLKASRNLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGE 180
Query: 122 KDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQ 181
+DL+ +++MI G+ EAL L +DM G+ +P+ ++ S
Sbjct: 181 QDLVVFNAMISGYANNSQADEALNLVKDMKLLGI-KPDVITWNALISG------------ 227
Query: 182 IHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGD 241
F +RN + ++ G+ PD+VSW +II+ +
Sbjct: 228 -------FSHMRNEEKVSEILELMCLDGY------------KPDVVSWTSIISGLVHNFQ 268
Query: 242 ANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNS 301
+A F+QM+ GL P+S T ++LL ACT+ + G +IH Y V G + ++
Sbjct: 269 NEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSA 328
Query: 302 LLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKP 361
LL MY KC + +A+ +F K V++N+++ H A + LF QM + K
Sbjct: 329 LLDMYGKCGFISEAMILFRKTPKKTT-VTFNSMIFCYANHGLADKAVELFDQMEATGEKL 387
Query: 362 NMITITNLLGTCAELASLEVGNQVHCF-SVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRV 420
+ +T T +L C+ ++G + K +V + ++D+ + G ++ A +
Sbjct: 388 DHLTFTAILTACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYACMVDLLGRAGKLVEAYEM 447
Query: 421 FDSTE-NPNVISWSSLI 436
+ P++ W +L+
Sbjct: 448 IKAMRMEPDLFVWGALL 464
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/331 (24%), Positives = 154/331 (46%), Gaps = 42/331 (12%)
Query: 252 MMHIGLIPDSITFLS------LLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTM 305
M + ++P S LS L+ A +G +H+++V G + + L+T
Sbjct: 1 MKKLTIVPSSFRLLSIGSYVELIEANGRDRLFCRGRVLHAHLVTSGIARLTRIAAKLVTF 60
Query: 306 YTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMIT 365
Y +C + DA VF+ + K ++ ++ AC ++ E+ F++M K +
Sbjct: 61 YVECGKVLDARKVFDEMPKR-DISGCVVMIGACARNGYYQESLDFFREMYKDGLKLDAFI 119
Query: 366 ITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTE 425
+ +LL L E G +HC +K D + + LIDMY+K G V +A++VF
Sbjct: 120 VPSLLKASRNLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLG 179
Query: 426 NPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWN 485
+++ ++++I GYA + EALNL + M+ LG++P+ +T+ ++S SH
Sbjct: 180 EQDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSH--------- 230
Query: 486 LYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTLLSSCKTH 545
M E E S +++L+ CL G+ PD+ +W +++S +
Sbjct: 231 ----MRNE-------EKVSEILELM----CL---------DGYKPDVVSWTSIISGLVHN 266
Query: 546 GNVDIAERAAENILK--LDPSNSAALVLLSS 574
+ A A + +L L P+++ + LL +
Sbjct: 267 FQNEKAFDAFKQMLTHGLYPNSATIITLLPA 297
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 107/222 (48%), Gaps = 3/222 (1%)
Query: 22 NVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTFGSIIKACCIAGDIYLGRQLH 81
+VVSWTS+ISG N Q +A + QML G +P+ T +++ AC + G+++H
Sbjct: 252 DVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIH 311
Query: 82 AHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIKDLISWSSMIRGFTQLGYEI 141
+ + +G H ++ L+ MY G ++ A +F K ++++SMI + G
Sbjct: 312 GYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKKTTVTFNSMIFCYANHGLAD 371
Query: 142 EALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICA-KFGLVRNVFSGCS 200
+A+ LF M G + + ++ +ACS + G+ + + K+ +V +
Sbjct: 372 KAVELFDQMEATG-EKLDHLTFTAILTACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYAC 430
Query: 201 LCDMYAKCGFLPSAKTAFYQIE-SPDLVSWNAIIAAFADSGD 241
+ D+ + G L A + PDL W A++AA + G+
Sbjct: 431 MVDLLGRAGKLVEAYEMIKAMRMEPDLFVWGALLAACRNHGN 472
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 92/209 (44%), Gaps = 35/209 (16%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
MYGKCG + +A +F + V++ SMI Y+ +G ++AV ++ QM +G D LT
Sbjct: 332 MYGKCGFISEAMILFRKTPKKTTVTFNSMIFCYANHGLADKAVELFDQMEATGEKLDHLT 391
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMIS 120
F +I+ AC AG LG+ L L+ QN Y ++ H
Sbjct: 392 FTAILTACSHAGLTDLGQNL-----------FLLMQNK----YRIVPRLEH--------- 427
Query: 121 IKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGR 180
++ M+ + G +EA +M++ +P+ FV G++ +AC + E R
Sbjct: 428 ------YACMVDLLGRAGKLVEAY----EMIKAMRMEPDLFVWGALLAACRNHGNMELAR 477
Query: 181 QIHGICAKFGLVRNVFSGCSLCDMYAKCG 209
A+ N +G L +YA G
Sbjct: 478 IAAKHLAELE-PENSGNGLLLTSLYANAG 505
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 298 bits (762), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 178/591 (30%), Positives = 290/591 (49%), Gaps = 82/591 (13%)
Query: 78 RQLHAHVIKSGF---GGHLVAQNGLISMYTNFGQVAHASDVFTMISI---KDLISWSSMI 131
RQ+HA V+ S F G L A LIS+Y G + A +VF +S+ DL W+S++
Sbjct: 73 RQVHAQVLLSDFIFRSGSLAAN--LISVYARLGLLLDARNVFETVSLVLLSDLRLWNSIL 130
Query: 132 RGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGL 191
+ G AL L+R M ++G+ + ++L + AC L R H + GL
Sbjct: 131 KANVSHGLYENALELYRGMRQRGL-TGDGYILPLILRACRYLGRFGLCRAFHTQVIQIGL 189
Query: 192 VRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQ 251
N+ L +Y K G + A F ++ + +SWN +I F+ D A+ IF
Sbjct: 190 KENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEW 249
Query: 252 MMHIGLIPDSITFLSLLC-----------------------------------ACTSPMA 276
M PD +T+ S+L C A
Sbjct: 250 MQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEA 309
Query: 277 LNQGMQIHSYIVKVGF-------------------------------NKEVALYNSLLTM 305
L+ ++H Y++K GF NK + +NSL+T
Sbjct: 310 LSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITS 369
Query: 306 YTKCSNLHDALSVFEAISK-------NANLVSWNAILSACLQHKQAGETFRLFKQMLFSE 358
+ L +ALS+F + + AN+V+W +++ C + ++ F+QM FS+
Sbjct: 370 FVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSK 429
Query: 359 NKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQ 418
N +TI +L CAEL +L +G ++H +++ + ++ V N L++MYAKCG +
Sbjct: 430 VLANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGS 489
Query: 419 RVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIG 478
VF++ + ++ISW+S+I GY M G +AL++F +M + G P+ + V VLSACSH G
Sbjct: 490 LVFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAG 549
Query: 479 LVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTL 538
LVE+G ++ +M + G+ P +EH++C+VDLL R G L EA ++ +P + L
Sbjct: 550 LVEKGREIFYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVKNMPMEPKVCVLGAL 609
Query: 539 LSSCKTHGNVDIAERAAENILKLDPSNSAALVLLSSIHASAGNWEDVAKLR 589
L+SC+ H NVDIAE A + L+P + + +LLS+I+++ G WE+ A +R
Sbjct: 610 LNSCRMHKNVDIAEGIASQLSVLEPERTGSYMLLSNIYSAGGRWEESANVR 660
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 121/498 (24%), Positives = 221/498 (44%), Gaps = 80/498 (16%)
Query: 1 MYGKCGSMKDARQVFDAMHL---RNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPD 57
+Y + G + DAR VF+ + L ++ W S++ +G A+ +Y M + G D
Sbjct: 98 VYARLGLLLDARNVFETVSLVLLSDLRLWNSILKANVSHGLYENALELYRGMRQRGLTGD 157
Query: 58 QLTFGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFT 117
I++AC G L R H VI+ G +L N L+++Y G++ A ++F
Sbjct: 158 GYILPLILRACRYLGRFGLCRAFHTQVIQIGLKENLHVVNELLTLYPKAGRMGDAYNLFV 217
Query: 118 MISIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSV----------- 166
+ +++ +SW+ MI+GF+Q Y+ E+ + +++ ++P+E SV
Sbjct: 218 EMPVRNRMSWNVMIKGFSQ-EYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFE 276
Query: 167 ------------------------FSACSSLLEPEYGRQIHGICAKFGLVRNVFSGCSLC 202
FS C+ L ++HG K G + S +L
Sbjct: 277 DVLKYFHLMRMSGNAVSGEALAVFFSVCAELEALSIAEKVHGYVIKGGFEEYLPSRNALI 336
Query: 203 DMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISI-------------- 248
+Y K G + A+ F QI + + SWN++I +F D+G +EA+S+
Sbjct: 337 HVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVK 396
Query: 249 -------------------------FRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQI 283
FRQM ++ +S+T +L C ALN G +I
Sbjct: 397 ANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVTICCILSICAELPALNLGREI 456
Query: 284 HSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQ 343
H ++++ ++ + + N+L+ MY KC L + VFEAI ++ +L+SWN+I+ H
Sbjct: 457 HGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFEAI-RDKDLISWNSIIKGYGMHGF 515
Query: 344 AGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQV-HCFSVKSGLVLDVSVSN 402
A + +F +M+ S P+ I + +L C+ +E G ++ + S + GL
Sbjct: 516 AEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLVEKGREIFYSMSKRFGLEPQQEHYA 575
Query: 403 GLIDMYAKCGSVIHAQRV 420
++D+ + G + A +
Sbjct: 576 CIVDLLGRVGFLKEASEI 593
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 109/416 (26%), Positives = 177/416 (42%), Gaps = 74/416 (17%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
+Y K G M DA +F M +RN +SW MI G+SQ AV ++ M R F PD++T
Sbjct: 202 LYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVT 261
Query: 61 FGSIIK-----------------------------------ACCIAGDIYLGRQLHAHVI 85
+ S++ C + + ++H +VI
Sbjct: 262 WTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEALSIAEKVHGYVI 321
Query: 86 KSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIKDLISWSSMIRGFTQLGYEIEALY 145
K GF +L ++N LI +Y G+V A +F I K + SW+S+I F G EAL
Sbjct: 322 KGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEALS 381
Query: 146 LFRDM-----------------------------------LRQGVYQP---NEFVLGSVF 167
LF ++ RQ + N + +
Sbjct: 382 LFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVTICCIL 441
Query: 168 SACSSLLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLV 227
S C+ L GR+IHG + + N+ +L +MYAKCG L F I DL+
Sbjct: 442 SICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFEAIRDKDLI 501
Query: 228 SWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQI-HSY 286
SWN+II + G A +A+S+F +M+ G PD I +++L AC+ + +G +I +S
Sbjct: 502 SWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLVEKGREIFYSM 561
Query: 287 IVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHK 342
+ G + Y ++ + + L +A + + + + A+L++C HK
Sbjct: 562 SKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVKNMPMEPKVCVLGALLNSCRMHK 617
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 296 bits (757), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 171/550 (31%), Positives = 293/550 (53%), Gaps = 36/550 (6%)
Query: 78 RQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMI-SIKDLISWSSMIRGFTQ 136
+QLHAH++++ L + +S+ ++ +++A +VF+ I S + I ++ +R ++
Sbjct: 29 KQLHAHILRTVINHKLNSFLFNLSVSSSSINLSYALNVFSSIPSPPESIVFNPFLRDLSR 88
Query: 137 LGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVF 196
E A LF +R + ++F + A S + G ++HG+ K + + F
Sbjct: 89 -SSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHGVAFKIATLCDPF 147
Query: 197 SGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIG 256
DMYA CG + A+ F ++ D+V+WN +I + G +EA +F +M
Sbjct: 148 VETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSN 207
Query: 257 LIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMY---------- 306
++PD + +++ AC + I+ ++++ + L +L+TMY
Sbjct: 208 VMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAR 267
Query: 307 ---------------------TKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAG 345
+KC L DA +F+ K +LV W ++SA ++
Sbjct: 268 EFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKK-DLVCWTTMISAYVESDYPQ 326
Query: 346 ETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVH-CFSVKSGLVLDVSVSNGL 404
E R+F++M S KP+++++ +++ CA L L+ VH C V +GL ++S++N L
Sbjct: 327 EALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHV-NGLESELSINNAL 385
Query: 405 IDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNE 464
I+MYAKCG + + VF+ NV+SWSS+I +M G +AL+LF +M+ V PNE
Sbjct: 386 INMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNE 445
Query: 465 VTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIR 524
VT+VGVL CSH GLVEEG ++ +M +E I P EH+ CMVDL RA L EA I
Sbjct: 446 VTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIE 505
Query: 525 KTGFDPDITTWKTLLSSCKTHGNVDIAERAAENILKLDPSNSAALVLLSSIHASAGNWED 584
++ W +L+S+C+ HG +++ + AA+ IL+L+P + ALVL+S+I+A WED
Sbjct: 506 SMPVASNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHDGALVLMSNIYAREQRWED 565
Query: 585 VAKLRKVLDD 594
V +R+V+++
Sbjct: 566 VRNIRRVMEE 575
Score = 187 bits (476), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 129/507 (25%), Positives = 233/507 (45%), Gaps = 44/507 (8%)
Query: 24 VSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTFGSIIKACCIAGDIYLGRQLHAH 83
+ + + S++ + ++ Y ++ G DQ +F I+KA ++ G +LH
Sbjct: 77 IVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHGV 136
Query: 84 VIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIKDLISWSSMIRGFTQLGYEIEA 143
K + G + MY + G++ +A +VF +S +D+++W++MI + + G EA
Sbjct: 137 AFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEA 196
Query: 144 LYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGL------------ 191
LF +M V P+E +L ++ SAC Y R I+ + +
Sbjct: 197 FKLFEEMKDSNV-MPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVT 255
Query: 192 -------------------VRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAI 232
VRN+F ++ Y+KCG L A+ F Q E DLV W +
Sbjct: 256 MYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTM 315
Query: 233 IAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGF 292
I+A+ +S EA+ +F +M G+ PD ++ S++ AC + L++ +HS I G
Sbjct: 316 ISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGL 375
Query: 293 NKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFK 352
E+++ N+L+ MY KC L VFE + + N+VSW+++++A H +A + LF
Sbjct: 376 ESELSINNALINMYAKCGGLDATRDVFEKMPRR-NVVSWSSMINALSMHGEASDALSLFA 434
Query: 353 QMLFSENKPNMITITNLLGTCAELASLEVGNQVHC-FSVKSGLVLDVSVSNGLIDMYAKC 411
+M +PN +T +L C+ +E G ++ + + + + ++D++ +
Sbjct: 435 RMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRA 494
Query: 412 GSVIHAQRVFDSTE-NPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGV 470
+ A V +S NV+ W SL+ + G L F R L + P+ + G
Sbjct: 495 NLLREALEVIESMPVASNVVIWGSLMSACRIH--GELELGKFAAKRILELEPD---HDGA 549
Query: 471 LSACSHIGLVEEGW----NLYNTMEEE 493
L S+I E+ W N+ MEE+
Sbjct: 550 LVLMSNIYAREQRWEDVRNIRRVMEEK 576
Score = 172 bits (436), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 100/375 (26%), Positives = 192/375 (51%), Gaps = 33/375 (8%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
MY CG + AR VFD M R+VV+W +MI Y + G +EA ++ +M S PD++
Sbjct: 155 MYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMI 214
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSG--------------FGG--------------- 91
+I+ AC G++ R ++ +I++ + G
Sbjct: 215 LCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMS 274
Query: 92 --HLVAQNGLISMYTNFGQVAHASDVFTMISIKDLISWSSMIRGFTQLGYEIEALYLFRD 149
+L ++S Y+ G++ A +F KDL+ W++MI + + Y EAL +F +
Sbjct: 275 VRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEE 334
Query: 150 MLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCG 209
M G+ +P+ + SV SAC++L + + +H GL + +L +MYAKCG
Sbjct: 335 MCCSGI-KPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCG 393
Query: 210 FLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLC 269
L + + F ++ ++VSW+++I A + G+A++A+S+F +M + P+ +TF+ +L
Sbjct: 394 GLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLY 453
Query: 270 ACTSPMALNQGMQIHSYIV-KVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANL 328
C+ + +G +I + + + ++ Y ++ ++ + + L +AL V E++ +N+
Sbjct: 454 GCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNV 513
Query: 329 VSWNAILSACLQHKQ 343
V W +++SAC H +
Sbjct: 514 VIWGSLMSACRIHGE 528
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 129/263 (49%), Gaps = 4/263 (1%)
Query: 263 TFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAI 322
T L L C S LN Q+H++I++ N ++ + L++ + NL AL+VF +I
Sbjct: 14 TILEKLSFCKS---LNHIKQLHAHILRTVINHKLNSFLFNLSVSSSSINLSYALNVFSSI 70
Query: 323 SKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVG 382
+ +N L + + T ++++ + + + +L +++++L G
Sbjct: 71 PSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEG 130
Query: 383 NQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMS 442
++H + K + D V G +DMYA CG + +A+ VFD + +V++W+++I Y
Sbjct: 131 MELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRF 190
Query: 443 GLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREH 502
GL EA LF +M++ V P+E+ ++SAC G + +Y + E +
Sbjct: 191 GLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIEN-DVRMDTHL 249
Query: 503 FSCMVDLLARAGCLYEAETFIRK 525
+ +V + A AGC+ A F RK
Sbjct: 250 LTALVTMYAGAGCMDMAREFFRK 272
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 295 bits (755), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 180/593 (30%), Positives = 309/593 (52%), Gaps = 26/593 (4%)
Query: 2 YGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTF 61
Y + G +A +VF M + VS+ MISGY +NG+ A ++ +M D +++
Sbjct: 74 YMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPER----DLVSW 129
Query: 62 GSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISI 121
+IK ++ R+L + + + + N ++S Y G V A VF +
Sbjct: 130 NVMIKGYVRNRNLGKARELFEIMPER----DVCSWNTMLSGYAQNGCVDDARSVFDRMPE 185
Query: 122 KDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQ 181
K+ +SW++++ + Q EA LF+ + N + G F ++E RQ
Sbjct: 186 KNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGG--FVKKKKIVE---ARQ 240
Query: 182 IHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGD 241
VR+V S ++ YA+ G + A+ F + D+ +W A+++ + +
Sbjct: 241 FFDSMN----VRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRM 296
Query: 242 ANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNS 301
EA +F +M + +++ ++L + M++ + V + V+ +N+
Sbjct: 297 VEEARELFDKMPE----RNEVSWNAMLAGYVQ----GERMEMAKELFDVMPCRNVSTWNT 348
Query: 302 LLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKP 361
++T Y +C + +A ++F+ + K + VSW A+++ Q + E RLF QM +
Sbjct: 349 MITGYAQCGKISEAKNLFDKMPKR-DPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRL 407
Query: 362 NMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVF 421
N + ++ L TCA++ +LE+G Q+H VK G V N L+ MY KCGS+ A +F
Sbjct: 408 NRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLF 467
Query: 422 DSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVE 481
+++SW+++I GY+ G G AL F M+ G++P++ T V VLSACSH GLV+
Sbjct: 468 KEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVD 527
Query: 482 EGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTLLSS 541
+G + TM ++ G+ P +H++CMVDLL RAG L +A ++ F+PD W TLL +
Sbjct: 528 KGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGA 587
Query: 542 CKTHGNVDIAERAAENILKLDPSNSAALVLLSSIHASAGNWEDVAKLRKVLDD 594
+ HGN ++AE AA+ I ++P NS VLLS+++AS+G W DV KLR + D
Sbjct: 588 SRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRD 640
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 114/480 (23%), Positives = 217/480 (45%), Gaps = 51/480 (10%)
Query: 123 DLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSV----FSACSSLLE--P 176
D+ W+ I + + G EAL +F+ M R N + G + F L + P
Sbjct: 63 DIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMP 122
Query: 177 EYGRQIHGICAKFGLVRNVFSG--------------CSLCDM---YAKCGFLPSAKTAFY 219
E + K G VRN G CS M YA+ G + A++ F
Sbjct: 123 ERDLVSWNVMIK-GYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFD 181
Query: 220 QIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQ 279
++ + VSWNA+++A+ + EA +F+ + L +++ LL + +
Sbjct: 182 RMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWAL----VSWNCLLGGFVKKKKIVE 237
Query: 280 GMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACL 339
Q + ++V +N+++T Y + + +A +F+ S ++ +W A++S +
Sbjct: 238 ARQFFDSMNV----RDVVSWNTIITGYAQSGKIDEARQLFDE-SPVQDVFTWTAMVSGYI 292
Query: 340 QHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVS 399
Q++ E LF +M + N ++ +L + +E+ ++ F V +VS
Sbjct: 293 QNRMVEEARELFDKM----PERNEVSWNAMLAGYVQGERMEMAKEL--FDVMP--CRNVS 344
Query: 400 VSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLG 459
N +I YA+CG + A+ +FD + +SW+++I GY+ SG EAL LF +M G
Sbjct: 345 TWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREG 404
Query: 460 VRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEE---ELGIPPAREHFSCMVDLLARAGCL 516
R N ++ LS C+ + +E G L+ + + E G + ++ + + G +
Sbjct: 405 GRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVG----NALLLMYCKCGSI 460
Query: 517 YEAETFIRKTGFDPDITTWKTLLSSCKTHGNVDIAERAAENILK--LDPSNSAALVLLSS 574
EA ++ DI +W T+++ HG ++A R E++ + L P ++ + +LS+
Sbjct: 461 EEANDLFKEMA-GKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSA 519
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 49/79 (62%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
MY KCGS+++A +F M +++VSW +MI+GYS++G G A+ + M R G PD T
Sbjct: 453 MYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDAT 512
Query: 61 FGSIIKACCIAGDIYLGRQ 79
+++ AC G + GRQ
Sbjct: 513 MVAVLSACSHTGLVDKGRQ 531
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/273 (19%), Positives = 119/273 (43%), Gaps = 37/273 (13%)
Query: 299 YNSLLTMYTKCSNLHDALSVFEAISK------------------NANLVSWNAILSACLQ 340
Y SL + +C+N H A + F ++ + ++++ WN +S+ ++
Sbjct: 18 YTSLNGLKRRCNNAHGAAN-FHSLKRATQTQIQKSQTKPLLKCGDSDIKEWNVAISSYMR 76
Query: 341 HKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSV 400
+ E R+FK+M + + ++ ++ E+ ++ + LV
Sbjct: 77 TGRCNEALRVFKRM----PRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDLV----S 128
Query: 401 SNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGV 460
N +I Y + ++ A+ +F+ +V SW++++ GYA +G +A ++F +M
Sbjct: 129 WNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRM----P 184
Query: 461 RPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAE 520
N+V++ +LSA +EE L+ + E + ++C++ + + EA
Sbjct: 185 EKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVS-----WNCLLGGFVKKKKIVEAR 239
Query: 521 TFIRKTGFDPDITTWKTLLSSCKTHGNVDIAER 553
F D+ +W T+++ G +D A +
Sbjct: 240 QFFDSMNV-RDVVSWNTIITGYAQSGKIDEARQ 271
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 295 bits (754), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 170/530 (32%), Positives = 289/530 (54%), Gaps = 21/530 (3%)
Query: 75 YLGRQLHAHVIKSG----------FGGHLVAQNGLISMYTNFGQVAHASDVFTMISIKDL 124
+LG LHA +IK+ LV N L+S+Y G++ A +F + ++D+
Sbjct: 62 HLGPCLHASIIKNPEFFEPVDADIHRNALVVWNSLLSLYAKCGKLVDAIKLFDEMPMRDV 121
Query: 125 ISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEY---GRQ 181
IS + + GF + L + ML G + + L V S C + PE+ +
Sbjct: 122 ISQNIVFYGFLRNRETESGFVLLKRMLGSGGF--DHATLTIVLSVCDT---PEFCLVTKM 176
Query: 182 IHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGD 241
IH + G + + G L Y KCG S + F + ++++ A+I+ ++
Sbjct: 177 IHALAILSGYDKEISVGNKLITSYFKCGCSVSGRGVFDGMSHRNVITLTAVISGLIENEL 236
Query: 242 ANEAISIFRQMMHIGLI-PDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYN 300
+ + +F +M GL+ P+S+T+LS L AC+ + +G QIH+ + K G E+ + +
Sbjct: 237 HEDGLRLF-SLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIESELCIES 295
Query: 301 SLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENK 360
+L+ MY+KC ++ DA ++FE+ ++ + VS IL Q+ E + F +ML + +
Sbjct: 296 ALMDMYSKCGSIEDAWTIFESTTE-VDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVE 354
Query: 361 PNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRV 420
+ ++ +LG SL +G Q+H +K + V+NGLI+MY+KCG + +Q V
Sbjct: 355 IDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTV 414
Query: 421 FDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLV 480
F N +SW+S+I +A G G AL L+ +M L V+P +VT++ +L ACSH+GL+
Sbjct: 415 FRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLI 474
Query: 481 EEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTLLS 540
++G L N M+E GI P EH++C++D+L RAG L EA++FI PD W+ LL
Sbjct: 475 DKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQALLG 534
Query: 541 SCKTHGNVDIAERAAENILKLDPSNSAALVLLSSIHASAGNWEDVAKLRK 590
+C HG+ ++ E AAE + + P +S+A +L+++I++S G W++ AK K
Sbjct: 535 ACSFHGDTEVGEYAAEQLFQTAPDSSSAHILIANIYSSRGKWKERAKTIK 584
Score = 196 bits (499), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 126/438 (28%), Positives = 216/438 (49%), Gaps = 5/438 (1%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
+Y KCG + DA ++FD M +R+V+S + G+ +N + V+ +ML SG F D T
Sbjct: 99 LYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLGSGGF-DHAT 157
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMIS 120
++ C + + +HA I SG+ + N LI+ Y G VF +S
Sbjct: 158 LTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRGVFDGMS 217
Query: 121 IKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGR 180
+++I+ +++I G + + L LF ++R+G+ PN S +ACS G+
Sbjct: 218 HRNVITLTAVISGLIENELHEDGLRLF-SLMRRGLVHPNSVTYLSALAACSGSQRIVEGQ 276
Query: 181 QIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSG 240
QIH + K+G+ + +L DMY+KCG + A T F D VS I+ A +G
Sbjct: 277 QIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNG 336
Query: 241 DANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYN 300
EAI F +M+ G+ D+ ++L +L G Q+HS ++K F+ + N
Sbjct: 337 SEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVNN 396
Query: 301 SLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENK 360
L+ MY+KC +L D+ +VF + K N VSWN++++A +H +L+++M E K
Sbjct: 397 GLINMYSKCGDLTDSQTVFRRMPKR-NYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVK 455
Query: 361 PNMITITNLLGTCAELASLEVGNQ-VHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQR 419
P +T +LL C+ + ++ G + ++ G+ +IDM + G + A+
Sbjct: 456 PTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLLKEAKS 515
Query: 420 VFDSTE-NPNVISWSSLI 436
DS P+ W +L+
Sbjct: 516 FIDSLPLKPDCKIWQALL 533
Score = 166 bits (421), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 117/417 (28%), Positives = 201/417 (48%), Gaps = 25/417 (5%)
Query: 2 YGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTF 61
Y KCG R VFD M RNV++ T++ISG +N + + ++ M R P+ +T+
Sbjct: 200 YFKCGCSVSGRGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTY 259
Query: 62 GSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISI 121
S + AC + I G+Q+HA + K G L ++ L+ MY+ G + A +F +
Sbjct: 260 LSALAACSGSQRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTE 319
Query: 122 KDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQ 181
D +S + ++ G Q G E EA+ F ML+ GV + + V+ +V G+Q
Sbjct: 320 VDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGV-EIDANVVSAVLGVSFIDNSLGLGKQ 378
Query: 182 IHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGD 241
+H + K N F L +MY+KCG L ++T F ++ + VSWN++IAAFA G
Sbjct: 379 LHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGH 438
Query: 242 ANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKV-GFNKEVALYN 300
A+ ++ +M + + P +TFLSLL AC+ +++G ++ + + +V G Y
Sbjct: 439 GLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYT 498
Query: 301 SLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQH--KQAGE--TFRLFKQMLF 356
++ M + L +A S +++ + W A+L AC H + GE +LF+
Sbjct: 499 CIIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQALLGACSFHGDTEVGEYAAEQLFQTAPD 558
Query: 357 S-----------------ENKPNMITITNLLGTCAE--LASLEVGNQVHCFSVKSGL 394
S + + I +G E ++S+E+ ++ H F V+ L
Sbjct: 559 SSSAHILIANIYSSRGKWKERAKTIKRMKAMGVTKETGISSIEIEHKTHSFVVEDKL 615
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/269 (31%), Positives = 134/269 (49%), Gaps = 17/269 (6%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
MY KCGS++DA +F++ + VS T ++ G +QNG EA+ +I+ML++G D
Sbjct: 300 MYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANV 359
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMIS 120
+++ I + LG+QLH+ VIK F G+ NGLI+MY+ G + + VF +
Sbjct: 360 VSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMP 419
Query: 121 IKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGR 180
++ +SW+SMI F + G+ + AL L+ +M V +P + S+ ACS + + GR
Sbjct: 420 KRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEV-KPTDVTFLSLLHACSHVGLIDKGR 478
Query: 181 -------QIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIE-SPDLVSWNAI 232
++HGI R C + DM + G L AK+ + PD W A+
Sbjct: 479 ELLNEMKEVHGIEP-----RTEHYTC-IIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQAL 532
Query: 233 IAAFADSGDANEAISIFRQMMHIGLIPDS 261
+ A + GD Q+ PDS
Sbjct: 533 LGACSFHGDTEVGEYAAEQLFQTA--PDS 559
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 294 bits (753), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 165/520 (31%), Positives = 273/520 (52%), Gaps = 35/520 (6%)
Query: 73 DIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIKDLISWSSMIR 132
DI R +H+ +I + L+ Y + VA A VF I +++I + MIR
Sbjct: 54 DIRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIR 113
Query: 133 GFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLV 192
+ G+ E + +F M V +P+ + V ACS GR+IHG K GL
Sbjct: 114 SYVNNGFYGEGVKVFGTMCGCNV-RPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLS 172
Query: 193 RNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQM 252
+F G L MY KCGFL A+ ++ D+VSWN+++ +A + ++A+ + R+M
Sbjct: 173 STLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREM 232
Query: 253 MHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNL 312
+ + D+ T SLL A ++ N MY K
Sbjct: 233 ESVKISHDAGTMASLLPAVSNTTTEN-------------------------VMYVK---- 263
Query: 313 HDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGT 372
+F + K + LVSWN ++ +++ E L+ +M +P+ ++IT++L
Sbjct: 264 ----DMFFKMGKKS-LVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPA 318
Query: 373 CAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISW 432
C + ++L +G ++H + + L+ ++ + N LIDMYAKCG + A+ VF++ ++ +V+SW
Sbjct: 319 CGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSW 378
Query: 433 SSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEE 492
+++I Y SG G +A+ LF K+++ G+ P+ + +V L+ACSH GL+EEG + + M +
Sbjct: 379 TAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTD 438
Query: 493 ELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTLLSSCKTHGNVDIAE 552
I P EH +CMVDLL RAG + EA FI+ +P+ W LL +C+ H + DI
Sbjct: 439 HYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGL 498
Query: 553 RAAENILKLDPSNSAALVLLSSIHASAGNWEDVAKLRKVL 592
AA+ + +L P S VLLS+I+A AG WE+V +R ++
Sbjct: 499 LAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIM 538
Score = 172 bits (437), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 127/438 (28%), Positives = 202/438 (46%), Gaps = 44/438 (10%)
Query: 6 GSMKD---ARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTFG 62
S+KD AR+VFD + RNV+ MI Y NG E V ++ M PD TF
Sbjct: 85 ASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFP 144
Query: 63 SIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIK 122
++KAC +G I +GR++H K G L NGL+SMY G ++ A V +S +
Sbjct: 145 CVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRR 204
Query: 123 DLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQI 182
D++SW+S++ G+ Q +AL + R+M + + + S+ A S+
Sbjct: 205 DVVSWNSLVVGYAQNQRFDDALEVCREMESVKISH-DAGTMASLLPAVSNT--------- 254
Query: 183 HGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDA 242
NV MY K F+++ LVSWN +I + +
Sbjct: 255 --------TTENV--------MY--------VKDMFFKMGKKSLVSWNVMIGVYMKNAMP 290
Query: 243 NEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSL 302
EA+ ++ +M G PD+++ S+L AC AL+ G +IH YI + + L N+L
Sbjct: 291 VEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENAL 350
Query: 303 LTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPN 362
+ MY KC L A VFE + K+ ++VSW A++SA + + LF ++ S P+
Sbjct: 351 IDMYAKCGCLEKARDVFENM-KSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPD 409
Query: 363 MITITNLLGTCAELASLEVGNQVHCFSVKSG---LVLDVSVSNGLIDMYAKCGSVIHAQR 419
I L C+ LE G CF + + + + ++D+ + G V A R
Sbjct: 410 SIAFVTTLAACSHAGLLEEGRS--CFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYR 467
Query: 420 -VFDSTENPNVISWSSLI 436
+ D + PN W +L+
Sbjct: 468 FIQDMSMEPNERVWGALL 485
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 97/342 (28%), Positives = 160/342 (46%), Gaps = 35/342 (10%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
MYGKCG + +AR V D M R+VVSW S++ GY+QN + ++A+ + +M D T
Sbjct: 184 MYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGT 243
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMIS 120
S++ A T V + D+F +
Sbjct: 244 MASLLPAVS---------------------------------NTTTENVMYVKDMFFKMG 270
Query: 121 IKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGR 180
K L+SW+ MI + + +EA+ L+ M G ++P+ + SV AC G+
Sbjct: 271 KKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADG-FEPDAVSITSVLPACGDTSALSLGK 329
Query: 181 QIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSG 240
+IHG + L+ N+ +L DMYAKCG L A+ F ++S D+VSW A+I+A+ SG
Sbjct: 330 KIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSG 389
Query: 241 DANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVK-VGFNKEVALY 299
+A+++F ++ GL+PDSI F++ L AC+ L +G + +
Sbjct: 390 RGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHL 449
Query: 300 NSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQH 341
++ + + + +A + +S N W A+L AC H
Sbjct: 450 ACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVH 491
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 92/391 (23%), Positives = 172/391 (43%), Gaps = 39/391 (9%)
Query: 151 LRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGF 210
L Q Q F+LG V + R +H L N G L YA
Sbjct: 33 LDQKSPQETVFLLGQVLDTYPDI---RTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKD 89
Query: 211 LPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCA 270
+ SA+ F +I +++ N +I ++ ++G E + +F M + PD TF +L A
Sbjct: 90 VASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKA 149
Query: 271 CTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVS 330
C+ + G +IH KVG + + + N L++MY KC L +A V + +S+ ++VS
Sbjct: 150 CSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRR-DVVS 208
Query: 331 WNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSV 390
WN+++ Q+++ + + ++M + I++ GT A L
Sbjct: 209 WNSLVVGYAQNQRFDDALEVCREM-------ESVKISHDAGTMASLLP------------ 249
Query: 391 KSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALN 450
+VSN + +V++ + +F +++SW+ +I Y + + EA+
Sbjct: 250 --------AVSNTTTE------NVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVE 295
Query: 451 LFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLL 510
L+ +M G P+ V+ VL AC + G ++ +E + IP + ++D+
Sbjct: 296 LYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLE-NALIDMY 354
Query: 511 ARAGCLYEAETFIRKTGFDPDITTWKTLLSS 541
A+ GCL +A D+ +W ++S+
Sbjct: 355 AKCGCLEKARDVFENMK-SRDVVSWTAMISA 384
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 294 bits (752), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 176/534 (32%), Positives = 290/534 (54%), Gaps = 16/534 (2%)
Query: 64 IIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQ-NGLISMYTNFGQVAHASDVFTMISIK 122
++K C + RQ+ A ++ H V + N LI G ++S +F++
Sbjct: 43 LLKKCISVNQL---RQIQAQMLL-----HSVEKPNFLIPKAVELGDFNYSSFLFSVTEEP 94
Query: 123 DLISWSSMIRGFTQLGYEIEA-LYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQ 181
+ S++ MIRG T + EA L L+R M G+ +P++F VF AC+ L E GR
Sbjct: 95 NHYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGL-KPDKFTYNFVFIACAKLEEIGVGRS 153
Query: 182 IHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGD 241
+H K GL R+V SL MYAKCG + A+ F +I D VSWN++I+ ++++G
Sbjct: 154 VHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGY 213
Query: 242 ANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNS 301
A +A+ +FR+M G PD T +S+L AC+ L G + + L +
Sbjct: 214 AKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSK 273
Query: 302 LLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKP 361
L++MY KC +L A VF + K + V+W A+++ Q+ ++ E F+LF +M + P
Sbjct: 274 LISMYGKCGDLDSARRVFNQMIKK-DRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSP 332
Query: 362 NMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVF 421
+ T++ +L C + +LE+G Q+ + + L ++ V+ GL+DMY KCG V A RVF
Sbjct: 333 DAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVF 392
Query: 422 DSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVE 481
++ N +W+++I YA G EAL LF +M V P+++T++GVLSAC H GLV
Sbjct: 393 EAMPVKNEATWNAMITAYAHQGHAKEALLLFDRM---SVPPSDITFIGVLSACVHAGLVH 449
Query: 482 EGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTLLSS 541
+G ++ M G+ P EH++ ++DLL+RAG L EA F+ + PD +L +
Sbjct: 450 QGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFPGKPDEIMLAAILGA 509
Query: 542 CKTHGNVDIAERAAENILKL-DPSNSAALVLLSSIHASAGNWEDVAKLRKVLDD 594
C +V I E+A ++++ + N+ V+ S++ A W++ AK+R ++ D
Sbjct: 510 CHKRKDVAIREKAMRMLMEMKEAKNAGNYVISSNVLADMKMWDESAKMRALMRD 563
Score = 215 bits (548), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 134/408 (32%), Positives = 209/408 (51%), Gaps = 11/408 (2%)
Query: 14 VFDAMHLRNVVSWTSMISGYSQNGQGNEAVV-MYIQMLRSGFFPDQLTFGSIIKACCIAG 72
+F N S+ MI G + +EA + +Y +M SG PD+ T+ + AC
Sbjct: 87 LFSVTEEPNHYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLE 146
Query: 73 DIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIKDLISWSSMIR 132
+I +GR +H+ + K G + + LI MY GQV +A +F I+ +D +SW+SMI
Sbjct: 147 EIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMIS 206
Query: 133 GFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIH--GICAKFG 190
G+++ GY +A+ LFR M +G ++P+E L S+ ACS L + GR + I K G
Sbjct: 207 GYSEAGYAKDAMDLFRKMEEEG-FEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIG 265
Query: 191 LVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFR 250
L + F G L MY KCG L SA+ F Q+ D V+W A+I ++ +G ++EA +F
Sbjct: 266 L--STFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFF 323
Query: 251 QMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCS 310
+M G+ PD+ T ++L AC S AL G QI ++ ++ + + L+ MY KC
Sbjct: 324 EMEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCG 383
Query: 311 NLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLL 370
+ +AL VFEA+ N +WNA+++A A E LF +M P+ IT +L
Sbjct: 384 RVEEALRVFEAMPVK-NEATWNAMITAYAHQGHAKEALLLFDRMSVP---PSDITFIGVL 439
Query: 371 GTCAELASLEVG-NQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHA 417
C + G H S GLV + +ID+ ++ G + A
Sbjct: 440 SACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEA 487
Score = 206 bits (525), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 122/375 (32%), Positives = 191/375 (50%), Gaps = 8/375 (2%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
MY KCG + AR++FD + R+ VSW SMISGYS+ G +A+ ++ +M GF PD+ T
Sbjct: 176 MYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERT 235
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMIS 120
S++ AC GD+ GR L I G + LISMY G + A VF +
Sbjct: 236 LVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMI 295
Query: 121 IKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGR 180
KD ++W++MI ++Q G EA LF +M + GV P+ L +V SAC S+ E G+
Sbjct: 296 KKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGV-SPDAGTLSTVLSACGSVGALELGK 354
Query: 181 QIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSG 240
QI ++ L N++ L DMY KCG + A F + + +WNA+I A+A G
Sbjct: 355 QIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAYAHQG 414
Query: 241 DANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQ-IHSYIVKVGFNKEVALY 299
A EA+ +F +M + P ITF+ +L AC ++QG + H G ++ Y
Sbjct: 415 HAKEALLLFDRM---SVPPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEHY 471
Query: 300 NSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAG---ETFRLFKQMLF 356
+++ + ++ L +A E + + AIL AC + K + R+ +M
Sbjct: 472 TNIIDLLSRAGMLDEAWEFMERFPGKPDEIMLAAILGACHKRKDVAIREKAMRMLMEMKE 531
Query: 357 SENKPNMITITNLLG 371
++N N + +N+L
Sbjct: 532 AKNAGNYVISSNVLA 546
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 291 bits (744), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 176/540 (32%), Positives = 297/540 (55%), Gaps = 18/540 (3%)
Query: 63 SIIKACCIAGDIYLGRQLHAHVIKSGF-GGHLVAQNGLISMYTNFGQVAHASDVFTMISI 121
+ ++ C D G+Q+H +++ GF A L++MY G + A VF S
Sbjct: 65 ATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFGG-SE 123
Query: 122 KDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQ 181
+D+ ++++I GF G ++A+ +R+M G+ P+++ S+ S +E ++
Sbjct: 124 RDVFGYNALISGFVVNGSPLDAMETYREMRANGIL-PDKYTFPSLLKG-SDAMELSDVKK 181
Query: 182 IHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQI-ESPDLVSWNAIIAAFADSG 240
+HG+ K G + + G L Y+K + A+ F ++ + D V WNA++ ++
Sbjct: 182 VHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIF 241
Query: 241 DANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYN 300
+A+ +F +M G+ T S+L A T ++ G IH VK G ++ + N
Sbjct: 242 RFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSN 301
Query: 301 SLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGE---TFRLFKQMLFS 357
+L+ MY K L +A S+FEA+ + +L +WN++L C+ H G+ T LF++ML S
Sbjct: 302 ALIDMYGKSKWLEEANSIFEAMDER-DLFTWNSVL--CV-HDYCGDHDGTLALFERMLCS 357
Query: 358 ENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVS----VSNGLIDMYAKCGS 413
+P+++T+T +L TC LASL G ++H + + SGL+ S + N L+DMY KCG
Sbjct: 358 GIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGD 417
Query: 414 VIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSA 473
+ A+ VFDS + SW+ +I GY + G AL++F M GV+P+E+T+VG+L A
Sbjct: 418 LRDARMVFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQA 477
Query: 474 CSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEA-ETFIRKTGFDPDI 532
CSH G + EG N ME I P +H++C++D+L RA L EA E I K D +
Sbjct: 478 CSHSGFLNEGRNFLAQMETVYNILPTSDHYACVIDMLGRADKLEEAYELAISKPICDNPV 537
Query: 533 TTWKTLLSSCKTHGNVDIAERAAENILKLDPSNSAALVLLSSIHASAGNWEDVAKLRKVL 592
W+++LSSC+ HGN D+A A + + +L+P + VL+S+++ AG +E+V +R +
Sbjct: 538 -VWRSILSSCRLHGNKDLALVAGKRLHELEPEHCGGYVLMSNVYVEAGKYEEVLDVRDAM 596
Score = 184 bits (466), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 116/387 (29%), Positives = 201/387 (51%), Gaps = 9/387 (2%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
MY KCG M+ A VF R+V + ++ISG+ NG +A+ Y +M +G PD+ T
Sbjct: 105 MYAKCGLMRRAVLVFGGSE-RDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYT 163
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMIS 120
F S++K A ++ +++H K GF +GL++ Y+ F V A VF +
Sbjct: 164 FPSLLKG-SDAMELSDVKKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELP 222
Query: 121 IK-DLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYG 179
+ D + W++++ G++Q+ +AL +F M +GV + + SV SA + + + G
Sbjct: 223 DRDDSVLWNALVNGYSQIFRFEDALLVFSKMREEGV-GVSRHTITSVLSAFTVSGDIDNG 281
Query: 180 RQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADS 239
R IHG+ K G ++ +L DMY K +L A + F ++ DL +WN+++
Sbjct: 282 RSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYC 341
Query: 240 GDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVG-FNKEVA- 297
GD + +++F +M+ G+ PD +T ++L C +L QG +IH Y++ G N++ +
Sbjct: 342 GDHDGTLALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSN 401
Query: 298 --LYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQML 355
++NSL+ MY KC +L DA VF+++ + + SWN +++ +F M
Sbjct: 402 EFIHNSLMDMYVKCGDLRDARMVFDSM-RVKDSASWNIMINGYGVQSCGELALDMFSCMC 460
Query: 356 FSENKPNMITITNLLGTCAELASLEVG 382
+ KP+ IT LL C+ L G
Sbjct: 461 RAGVKPDEITFVGLLQACSHSGFLNEG 487
Score = 163 bits (413), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 113/349 (32%), Positives = 174/349 (49%), Gaps = 13/349 (3%)
Query: 2 YGKCGSMKDARQVFDAMHLRN-VVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
Y K S++DA++VFD + R+ V W ++++GYSQ + +A++++ +M G + T
Sbjct: 205 YSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMREEGVGVSRHT 264
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMIS 120
S++ A ++GDI GR +H +K+G G +V N LI MY + A+ +F +
Sbjct: 265 ITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMD 324
Query: 121 IKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGR 180
+DL +W+S++ G L LF ML G+ +P+ L +V C L GR
Sbjct: 325 ERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGI-RPDIVTLTTVLPTCGRLASLRQGR 383
Query: 181 QIHGICAKFGLVR----NVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAF 236
+IHG GL+ N F SL DMY KCG L A+ F + D SWN +I +
Sbjct: 384 EIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMRVKDSASWNIMINGY 443
Query: 237 ADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFN--K 294
A+ +F M G+ PD ITF+ LL AC+ LN+G + + V +N
Sbjct: 444 GVQSCGELALDMFSCMCRAGVKPDEITFVGLLQACSHSGFLNEGRNFLAQMETV-YNILP 502
Query: 295 EVALYNSLLTMYTKCSNLHDALSVFEAISKN--ANLVSWNAILSACLQH 341
Y ++ M + L +A + AISK N V W +ILS+C H
Sbjct: 503 TSDHYACVIDMLGRADKLEEAYEL--AISKPICDNPVVWRSILSSCRLH 549
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 83/335 (24%), Positives = 158/335 (47%), Gaps = 17/335 (5%)
Query: 263 TFLSLLCACTSPMALNQGMQIHSYIVKVGF-NKEVALYNSLLTMYTKCSNLHDALSVFEA 321
T ++ L C G QIH ++V+ GF + SL+ MY KC + A+ VF
Sbjct: 62 TCIATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFGG 121
Query: 322 ISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEV 381
+ ++ +NA++S + + + +++M + P+ T +LL + +V
Sbjct: 122 SER--DVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAMELSDV 179
Query: 382 GNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDS-TENPNVISWSSLIVGYA 440
+VH + K G D V +GL+ Y+K SV AQ+VFD + + + W++L+ GY+
Sbjct: 180 -KKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYS 238
Query: 441 MSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAR 500
+AL +F KMR GV + T VLSA + G ++ G +++ + + G
Sbjct: 239 QIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHG-LAVKTGSGSDI 297
Query: 501 EHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTLL---SSCKTH-GNVDIAERAAE 556
+ ++D+ ++ L EA + + D+ TW ++L C H G + + ER
Sbjct: 298 VVSNALIDMYGKSKWLEEANSIFEAMD-ERDLFTWNSVLCVHDYCGDHDGTLALFERMLC 356
Query: 557 NILKLDPSNSAALVLLSSIHASAGNWEDVAKLRKV 591
+ ++ D +V L+++ + G + + R++
Sbjct: 357 SGIRPD------IVTLTTVLPTCGRLASLRQGREI 385
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 52/84 (61%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
MY KCG ++DAR VFD+M +++ SW MI+GY G A+ M+ M R+G PD++T
Sbjct: 411 MYVKCGDLRDARMVFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEIT 470
Query: 61 FGSIIKACCIAGDIYLGRQLHAHV 84
F +++AC +G + GR A +
Sbjct: 471 FVGLLQACSHSGFLNEGRNFLAQM 494
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 64/121 (52%), Gaps = 2/121 (1%)
Query: 362 NMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLD-VSVSNGLIDMYAKCGSVIHAQRV 420
N+ T L CA+ G Q+H F V+ G + D L++MYAKCG + A V
Sbjct: 59 NVATCIATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLV 118
Query: 421 FDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLV 480
F +E +V +++LI G+ ++G +A+ +R+MR G+ P++ T+ +L + L
Sbjct: 119 FGGSER-DVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAMELS 177
Query: 481 E 481
+
Sbjct: 178 D 178
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 291 bits (744), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 173/570 (30%), Positives = 298/570 (52%), Gaps = 41/570 (7%)
Query: 60 TFGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHAS------ 113
TF ++ D++ G+ LHA +KS N +++Y+ G++++A
Sbjct: 10 TFRDLLLKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYST 69
Query: 114 -------------------------DVFTMISIKDLISWSSMIRGFTQLGYEIEALYLFR 148
+F I D +S++++I G+ A+ LF+
Sbjct: 70 EEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFK 129
Query: 149 DMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKC 208
M + G ++ + F L + +AC ++ +Q+H G + Y+K
Sbjct: 130 RMRKLG-FEVDGFTLSGLIAACCDRVD--LIKQLHCFSVSGGFDSYSSVNNAFVTYYSKG 186
Query: 209 GFLPSAKTAFYQI-ESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSL 267
G L A + FY + E D VSWN++I A+ + +A++++++M+ G D T S+
Sbjct: 187 GLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASV 246
Query: 268 LCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKC---SNLHDALSVFEAISK 324
L A TS L G Q H ++K GF++ + + L+ Y+KC ++D+ VF+ I
Sbjct: 247 LNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEIL- 305
Query: 325 NANLVSWNAILSA-CLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGN 383
+ +LV WN ++S + + + E + F+QM ++P+ + + C+ L+S
Sbjct: 306 SPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCK 365
Query: 384 QVHCFSVKSGLVLD-VSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMS 442
Q+H ++KS + + +SV+N LI +Y K G++ A+ VFD N +S++ +I GYA
Sbjct: 366 QIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQH 425
Query: 443 GLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREH 502
G G EAL L+++M + G+ PN++T+V VLSAC+H G V+EG +NTM+E I P EH
Sbjct: 426 GHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEH 485
Query: 503 FSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTLLSSCKTHGNVDIAERAAENILKLD 562
+SCM+DLL RAG L EAE FI + P W LL +C+ H N+ +AERAA ++ +
Sbjct: 486 YSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANELMVMQ 545
Query: 563 PSNSAALVLLSSIHASAGNWEDVAKLRKVL 592
P + V+L++++A A WE++A +RK +
Sbjct: 546 PLAATPYVMLANMYADARKWEEMASVRKSM 575
Score = 220 bits (561), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 146/473 (30%), Positives = 245/473 (51%), Gaps = 17/473 (3%)
Query: 2 YGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTF 61
Y K + ARQ+FD + + VS+ ++ISGY+ + A+V++ +M + GF D T
Sbjct: 84 YAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTL 143
Query: 62 GSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFT-MIS 120
+I ACC D L +QLH + GF + N ++ Y+ G + A VF M
Sbjct: 144 SGLIAACCDRVD--LIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDE 201
Query: 121 IKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGR 180
++D +SW+SMI + Q +AL L+++M+ +G ++ + F L SV +A +SL GR
Sbjct: 202 LRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKG-FKIDMFTLASVLNALTSLDHLIGGR 260
Query: 181 QIHGICAKFGLVRNVFSGCSLCDMYAKCG---FLPSAKTAFYQIESPDLVSWNAIIAAFA 237
Q HG K G +N G L D Y+KCG + ++ F +I SPDLV WN +I+ ++
Sbjct: 261 QFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYS 320
Query: 238 DSGD-ANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGF-NKE 295
+ + + EA+ FRQM IG PD +F+ + AC++ + +Q QIH +K +
Sbjct: 321 MNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNR 380
Query: 296 VALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQML 355
+++ N+L+++Y K NL DA VF+ + + N VS+N ++ QH E L+++ML
Sbjct: 381 ISVNNALISLYYKSGNLQDARWVFDRMPE-LNAVSFNCMIKGYAQHGHGTEALLLYQRML 439
Query: 356 FSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSN--GLIDMYAKCGS 413
S PN IT +L CA ++ G Q + ++K ++ + +ID+ + G
Sbjct: 440 DSGIAPNKITFVAVLSACAHCGKVDEG-QEYFNTMKETFKIEPEAEHYSCMIDLLGRAGK 498
Query: 414 VIHAQRVFDSTE-NPNVISWSSLI---VGYAMSGLGHEALNLFRKMRNLGVRP 462
+ A+R D+ P ++W++L+ + L A N M+ L P
Sbjct: 499 LEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANELMVMQPLAATP 551
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 54/79 (68%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
+Y K G+++DAR VFD M N VS+ MI GY+Q+G G EA+++Y +ML SG P+++T
Sbjct: 390 LYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKIT 449
Query: 61 FGSIIKACCIAGDIYLGRQ 79
F +++ AC G + G++
Sbjct: 450 FVAVLSACAHCGKVDEGQE 468
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 290 bits (741), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 166/574 (28%), Positives = 301/574 (52%), Gaps = 43/574 (7%)
Query: 57 DQLTFGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNF--GQVAHASD 114
D F SI+ C +QLH+ I G + Q L + + G V++A
Sbjct: 33 DYSRFISILGVCKTTDQF---KQLHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVSYAYK 89
Query: 115 VFTMISIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNE---FVLGSVFSACS 171
+F I D++ W++MI+G++++ + E + L+ +ML++GV + F+L +
Sbjct: 90 LFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGG 149
Query: 172 SLLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNA 231
+L G+++H KFGL N++ +L MY+ CG + A+ F + D+ SWN
Sbjct: 150 AL---ACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNL 206
Query: 232 IIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVG 291
+I+ + + E+I + +M + P S+T L +L AC+ + ++H Y+ +
Sbjct: 207 MISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECK 266
Query: 292 FNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQ----------- 340
+ L N+L+ Y C + A+ +F ++ K +++SW +I+ ++
Sbjct: 267 TEPSLRLENALVNAYAACGEMDIAVRIFRSM-KARDVISWTSIVKGYVERGNLKLARTYF 325
Query: 341 -----------------HKQAG---ETFRLFKQMLFSENKPNMITITNLLGTCAELASLE 380
+ +AG E+ +F++M + P+ T+ ++L CA L SLE
Sbjct: 326 DQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLE 385
Query: 381 VGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYA 440
+G + + K+ + DV V N LIDMY KCG AQ+VF + + +W++++VG A
Sbjct: 386 IGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLA 445
Query: 441 MSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAR 500
+G G EA+ +F +M+++ ++P+++TY+GVLSAC+H G+V++ + M + I P+
Sbjct: 446 NNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSL 505
Query: 501 EHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTLLSSCKTHGNVDIAERAAENILK 560
H+ CMVD+L RAG + EA +RK +P+ W LL + + H + +AE AA+ IL+
Sbjct: 506 VHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILE 565
Query: 561 LDPSNSAALVLLSSIHASAGNWEDVAKLRKVLDD 594
L+P N A LL +I+A W+D+ ++R+ + D
Sbjct: 566 LEPDNGAVYALLCNIYAGCKRWKDLREVRRKIVD 599
Score = 185 bits (470), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 131/466 (28%), Positives = 216/466 (46%), Gaps = 38/466 (8%)
Query: 6 GSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTFGSII 65
G + A ++F + +VV W +MI G+S+ E V +Y+ ML+ G PD TF ++
Sbjct: 82 GHVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLL 141
Query: 66 KACCI-AGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIKDL 124
G + G++LH HV+K G G +L QN L+ MY+ G + A VF +D+
Sbjct: 142 NGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDV 201
Query: 125 ISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIH- 183
SW+ MI G+ ++ E++ L +M R V P L V SACS + + + +++H
Sbjct: 202 FSWNLMISGYNRMKEYEESIELLVEMERNLV-SPTSVTLLLVLSACSKVKDKDLCKRVHE 260
Query: 184 ---------------------GICAKFGL---------VRNVFSGCSLCDMYAKCGFLPS 213
C + + R+V S S+ Y + G L
Sbjct: 261 YVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKL 320
Query: 214 AKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTS 273
A+T F Q+ D +SW +I + +G NE++ IFR+M G+IPD T +S+L AC
Sbjct: 321 ARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAH 380
Query: 274 PMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNA 333
+L G I +YI K +V + N+L+ MY KC A VF + + +W A
Sbjct: 381 LGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKF-TWTA 439
Query: 334 ILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSG 393
++ + Q E ++F QM +P+ IT +L C ++ + ++S
Sbjct: 440 MVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFA-KMRSD 498
Query: 394 LVLDVSVSN--GLIDMYAKCGSVIHAQRVFDSTE-NPNVISWSSLI 436
++ S+ + ++DM + G V A + NPN I W +L+
Sbjct: 499 HRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALL 544
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 105/374 (28%), Positives = 180/374 (48%), Gaps = 35/374 (9%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
MY CG M AR VFD +V SW MISGY++ + E++ + ++M R+ P +T
Sbjct: 179 MYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVT 238
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMIS 120
++ AC D L +++H +V + L +N L++ Y G++ A +F +
Sbjct: 239 LLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMK 298
Query: 121 IKDLISWSSMIRGFTQLG-------------------YEI------------EALYLFRD 149
+D+ISW+S+++G+ + G + I E+L +FR+
Sbjct: 299 ARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFRE 358
Query: 150 MLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCG 209
M G+ P+EF + SV +AC+ L E G I K + +V G +L DMY KCG
Sbjct: 359 MQSAGMI-PDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCG 417
Query: 210 FLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLC 269
A+ F+ ++ D +W A++ A++G EAI +F QM + + PD IT+L +L
Sbjct: 418 CSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLS 477
Query: 270 ACTSPMALNQGMQIHSYIVKVGFNKEVAL--YNSLLTMYTKCSNLHDALSVFEAISKNAN 327
AC ++Q + + + + E +L Y ++ M + + +A + + N N
Sbjct: 478 ACNHSGMVDQARKFFAKM-RSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPN 536
Query: 328 LVSWNAILSACLQH 341
+ W A+L A H
Sbjct: 537 SIVWGALLGASRLH 550
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 132/277 (47%), Gaps = 19/277 (6%)
Query: 2 YGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTF 61
Y + G++K AR FD M +R+ +SWT MI GY + G NE++ ++ +M +G PD+ T
Sbjct: 312 YVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTM 371
Query: 62 GSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISI 121
S++ AC G + +G + ++ K+ +V N LI MY G A VF +
Sbjct: 372 VSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQ 431
Query: 122 KDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQ 181
+D +W++M+ G G EA+ +F M + QP++ V SAC+ + R+
Sbjct: 432 RDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSI-QPDDITYLGVLSACNHSGMVDQARK 490
Query: 182 IHGICAKFGLVRN--------VFSGCSLCDMYAKCGFLPSAKTAFYQIE-SPDLVSWNAI 232
F +R+ V GC + DM + G + A ++ +P+ + W A+
Sbjct: 491 F------FAKMRSDHRIEPSLVHYGC-MVDMLGRAGLVKEAYEILRKMPMNPNSIVWGAL 543
Query: 233 IAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLC 269
+ A D A ++++ L PD+ +LLC
Sbjct: 544 LGASRLHNDEPMAELAAKKILE--LEPDNGAVYALLC 578
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 286 bits (733), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 168/540 (31%), Positives = 294/540 (54%), Gaps = 23/540 (4%)
Query: 58 QLTFGSIIKACCIAGDIYLGRQLHAHVIKSGF--GGHLVAQNGLISMYTNFGQVAHASDV 115
Q + ++ +AC ++ G LH H++ + +++ N LI+MY G + +A V
Sbjct: 59 QQAYAALFQACAEQRNLLDGINLHHHMLSHPYCYSQNVILANFLINMYAKCGNILYARQV 118
Query: 116 FTMISIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLE 175
F + ++++SW+++I G+ Q G E E LF ML PNEF L SV ++C E
Sbjct: 119 FDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSMLSHCF--PNEFTLSSVLTSCR--YE 174
Query: 176 PEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKC---GFLPSAKTAFYQIESPDLVSWNAI 232
P G+Q+HG+ K GL +++ ++ MY +C A T F I+ +LV+WN++
Sbjct: 175 P--GKQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIKFKNLVTWNSM 232
Query: 233 IAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCAC--TSPMALNQ----GMQIHSY 286
IAAF +AI +F +M G+ D T L++ + +S + N+ +Q+HS
Sbjct: 233 IAAFQCCNLGKKAIGVFMRMHSDGVGFDRATLLNICSSLYKSSDLVPNEVSKCCLQLHSL 292
Query: 287 IVKVGFNKEVALYNSLLTMYTK-CSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAG 345
VK G + + +L+ +Y++ + D +F +S ++V+WN I++A +
Sbjct: 293 TVKSGLVTQTEVATALIKVYSEMLEDYTDCYKLFMEMSHCRDIVAWNGIITAFAVY-DPE 351
Query: 346 ETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLI 405
LF Q+ + P+ T +++L CA L + +H +K G + D ++N LI
Sbjct: 352 RAIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTVLNNSLI 411
Query: 406 DMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEV 465
YAKCGS+ RVFD ++ +V+SW+S++ Y++ G L +F+KM + P+
Sbjct: 412 HAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKM---DINPDSA 468
Query: 466 TYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRK 525
T++ +LSACSH G VEEG ++ +M E+ P H++C++D+L+RA EAE I++
Sbjct: 469 TFIALLSACSHAGRVEEGLRIFRSMFEKPETLPQLNHYACVIDMLSRAERFAEAEEVIKQ 528
Query: 526 TGFDPDITTWKTLLSSCKTHGNVDIAERAAENILKL-DPSNSAALVLLSSIHASAGNWED 584
DPD W LL SC+ HGN + + AA+ + +L +P+NS + + +S+I+ + G++ +
Sbjct: 529 MPMDPDAVVWIALLGSCRKHGNTRLGKLAADKLKELVEPTNSMSYIQMSNIYNAEGSFNE 588
Score = 190 bits (482), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 147/487 (30%), Positives = 231/487 (47%), Gaps = 36/487 (7%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
MY KCG++ ARQVFD M RNVVSWT++I+GY Q G E ++ ML S FP++ T
Sbjct: 105 MYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSML-SHCFPNEFT 163
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASD---VFT 117
S++ +C G+Q+H +K G + N +ISMY A A + VF
Sbjct: 164 LSSVLTSCRYEP----GKQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFE 219
Query: 118 MISIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEP- 176
I K+L++W+SMI F +A+ +F M GV F ++ + CSSL +
Sbjct: 220 AIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGV----GFDRATLLNICSSLYKSS 275
Query: 177 -----EYGR---QIHGICAKFGLVRNVFSGCSLCDMYAKC--GFLPSAKTAFYQIESPDL 226
E + Q+H + K GLV +L +Y++ + K D+
Sbjct: 276 DLVPNEVSKCCLQLHSLTVKSGLVTQTEVATALIKVYSEMLEDYTDCYKLFMEMSHCRDI 335
Query: 227 VSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSY 286
V+WN II AFA D AI +F Q+ L PD TF S+L AC + + IH+
Sbjct: 336 VAWNGIITAFA-VYDPERAIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTARHALSIHAQ 394
Query: 287 IVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGE 346
++K GF + L NSL+ Y KC +L + VF+ + ++VSWN++L A H Q
Sbjct: 395 VIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSR-DVVSWNSMLKAYSLHGQVDS 453
Query: 347 TFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQV-HCFSVKSGLVLDVSVSNGLI 405
+F++M + P+ T LL C+ +E G ++ K + ++ +I
Sbjct: 454 ILPVFQKM---DINPDSATFIALLSACSHAGRVEEGLRIFRSMFEKPETLPQLNHYACVI 510
Query: 406 DMYAKCGSVIHAQRVFDSTE-NPNVISWSSLIVGYAMSG---LGHEALNLFRKMRNLGVR 461
DM ++ A+ V +P+ + W +L+ G LG A + K++ L
Sbjct: 511 DMLSRAERFAEAEEVIKQMPMDPDAVVWIALLGSCRKHGNTRLGKLAAD---KLKELVEP 567
Query: 462 PNEVTYV 468
N ++Y+
Sbjct: 568 TNSMSYI 574
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 285 bits (730), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 180/572 (31%), Positives = 290/572 (50%), Gaps = 41/572 (7%)
Query: 62 GSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISI 121
S++ C + G+QLHAH I SG V L++ Y+ F + A + I
Sbjct: 87 ASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEI 146
Query: 122 KDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQ 181
+ W+ +I + + E++ +++ M+ +G+ + +EF SV AC++LL+ YGR
Sbjct: 147 LHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGI-RADEFTYPSVIKACAALLDFAYGRV 205
Query: 182 IHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGD 241
+HG N++ +L MY + G + A+ F ++ D VSWNAII +
Sbjct: 206 VHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEK 265
Query: 242 ANEAISIFRQMMHIGLIPDSITFLSL---------------------------------- 267
EA + +M G+ +T+ ++
Sbjct: 266 LGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMIN 325
Query: 268 -LCACTSPMALNQGMQIHSYIVK-VGFNKEVA-LYNSLLTMYTKCSNLHDALSVFEAISK 324
L AC+ AL G H +++ F+ ++ + NSL+TMY++CS+L A VF+ +
Sbjct: 326 GLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEA 385
Query: 325 NANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQ 384
N+ L +WN+I+S ++++ ET L K+ML S PN IT+ ++L A + +L+ G +
Sbjct: 386 NS-LSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKE 444
Query: 385 VHCFSVKSGLVLDVSVS-NGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSG 443
HC+ ++ D + N L+DMYAK G +I A+RVFDS + ++++SLI GY G
Sbjct: 445 FHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLG 504
Query: 444 LGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHF 503
G AL F+ M G++P+ VT V VLSACSH LV EG L+ ME GI EH+
Sbjct: 505 KGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHY 564
Query: 504 SCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTLLSSCKTHGNVDIAERAAEN-ILKLD 562
SCMVDL RAG L +A ++P TLL +C HGN +I E AA+ +L+
Sbjct: 565 SCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETK 624
Query: 563 PSNSAALVLLSSIHASAGNWEDVAKLRKVLDD 594
P + +LL+ ++A G+W + ++ +L D
Sbjct: 625 PEHLGHYMLLADMYAVTGSWSKLVTVKTLLSD 656
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 120/466 (25%), Positives = 215/466 (46%), Gaps = 51/466 (10%)
Query: 2 YGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTF 61
Y + +A+ + + + + + W +I Y +N + E+V +Y +M+ G D+ T+
Sbjct: 128 YSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTY 187
Query: 62 GSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISI 121
S+IKAC D GR +H + S +L N LISMY FG+V A +F +S
Sbjct: 188 PSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSE 247
Query: 122 KDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGV--------------YQPNEFV----- 162
+D +SW+++I +T EA L M GV + ++
Sbjct: 248 RDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNC 307
Query: 163 ----------LGSV-----FSACSSLLEPEYGRQIHGI----CAKFGLVRNVFSGCSLCD 203
+GSV ACS + ++G+ H + C+ + NV + SL
Sbjct: 308 VVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRN--SLIT 365
Query: 204 MYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSIT 263
MY++C L A F Q+E+ L +WN+II+ FA + + E + ++M+ G P+ IT
Sbjct: 366 MYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHIT 425
Query: 264 FLSLLCACTSPMALNQGMQIHSYIVKVGFNKE-VALYNSLLTMYTKCSNLHDALSVFEAI 322
S+L L G + H YI++ K+ + L+NSL+ MY K + A VF+++
Sbjct: 426 LASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSM 485
Query: 323 SKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVG 382
K + V++ +++ + + FK M S KP+ +T+ +L C+ + G
Sbjct: 486 RKR-DKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREG 544
Query: 383 NQV-----HCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDS 423
+ + H F G+ L + + ++D+Y + G + A+ +F +
Sbjct: 545 HWLFTKMEHVF----GIRLRLEHYSCMVDLYCRAGYLDKARDIFHT 586
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 100/384 (26%), Positives = 172/384 (44%), Gaps = 48/384 (12%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
MY + G + AR++FD M R+ VSW ++I+ Y+ + EA + +M SG +T
Sbjct: 228 MYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVT 287
Query: 61 FGSI-----------------------------------IKACCIAGDIYLGRQLHAHVI 85
+ +I +KAC G + G+ H VI
Sbjct: 288 WNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVI 347
Query: 86 KSGFGGHLV--AQNGLISMYTNFGQVAHASDVFTMISIKDLISWSSMIRGFTQLGYEIEA 143
+S H + +N LI+MY+ + HA VF + L +W+S+I GF E
Sbjct: 348 RSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEET 407
Query: 144 LYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFSGC---- 199
+L ++ML G + PN L S+ + + ++G++ H C + L R + C
Sbjct: 408 SFLLKEMLLSG-FHPNHITLASILPLFARVGNLQHGKEFH--C--YILRRQSYKDCLILW 462
Query: 200 -SLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLI 258
SL DMYAK G + +AK F + D V++ ++I + G A++ F+ M G+
Sbjct: 463 NSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIK 522
Query: 259 PDSITFLSLLCACTSPMALNQGMQIHSYIVKV-GFNKEVALYNSLLTMYTKCSNLHDALS 317
PD +T +++L AC+ + +G + + + V G + Y+ ++ +Y + L A
Sbjct: 523 PDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARD 582
Query: 318 VFEAISKNANLVSWNAILSACLQH 341
+F I + +L ACL H
Sbjct: 583 IFHTIPYEPSSAMCATLLKACLIH 606
Score = 132 bits (331), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 105/437 (24%), Positives = 192/437 (43%), Gaps = 50/437 (11%)
Query: 159 NEFVL---GSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAK 215
+EFVL S+ S C E G+Q+H C GL + L Y+ L A+
Sbjct: 79 HEFVLYSSASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQ 138
Query: 216 TAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPM 275
T E + WN +I ++ + E++S++++MM G+ D T+ S++ AC + +
Sbjct: 139 TITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALL 198
Query: 276 ALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAIL 335
G +H I + + N+L++MY + + A +F+ +S+ + VSWNAI+
Sbjct: 199 DFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSER-DAVSWNAII 257
Query: 336 SACLQHKQAGETFRLFKQMLFSENKPNMIT------------------------------ 365
+ ++ GE F+L +M S + +++T
Sbjct: 258 NCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVR 317
Query: 366 -----ITNLLGTCAELASLEVGNQVHCFSVKS-GLVLDV-SVSNGLIDMYAKCGSVIHAQ 418
+ N L C+ + +L+ G HC ++S D+ +V N LI MY++C + HA
Sbjct: 318 IGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAF 377
Query: 419 RVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIG 478
VF E ++ +W+S+I G+A + E L ++M G PN +T +L + +G
Sbjct: 378 IVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVG 437
Query: 479 LVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDP----DITT 534
++ G + + ++ +VD+ A++G E K FD D T
Sbjct: 438 NLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSG-----EIIAAKRVFDSMRKRDKVT 492
Query: 535 WKTLLSSCKTHGNVDIA 551
+ +L+ G ++A
Sbjct: 493 YTSLIDGYGRLGKGEVA 509
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 69/140 (49%), Gaps = 2/140 (1%)
Query: 338 CLQHKQAGETFRLFKQMLFSENKPNMITIT--NLLGTCAELASLEVGNQVHCFSVKSGLV 395
C+ H Q E FR F + + + + +LL TC G Q+H + SGL
Sbjct: 56 CISHGQLYEAFRTFSLLRYQSGSHEFVLYSSASLLSTCVGFNEFVPGQQLHAHCISSGLE 115
Query: 396 LDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKM 455
D + L+ Y+ + AQ + +++E + + W+ LI Y + E+++++++M
Sbjct: 116 FDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRM 175
Query: 456 RNLGVRPNEVTYVGVLSACS 475
+ G+R +E TY V+ AC+
Sbjct: 176 MSKGIRADEFTYPSVIKACA 195
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 285 bits (730), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 180/572 (31%), Positives = 290/572 (50%), Gaps = 41/572 (7%)
Query: 62 GSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISI 121
S++ C + G+QLHAH I SG V L++ Y+ F + A + I
Sbjct: 87 ASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEI 146
Query: 122 KDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQ 181
+ W+ +I + + E++ +++ M+ +G+ + +EF SV AC++LL+ YGR
Sbjct: 147 LHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGI-RADEFTYPSVIKACAALLDFAYGRV 205
Query: 182 IHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGD 241
+HG N++ +L MY + G + A+ F ++ D VSWNAII +
Sbjct: 206 VHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEK 265
Query: 242 ANEAISIFRQMMHIGLIPDSITFLSL---------------------------------- 267
EA + +M G+ +T+ ++
Sbjct: 266 LGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMIN 325
Query: 268 -LCACTSPMALNQGMQIHSYIVK-VGFNKEVA-LYNSLLTMYTKCSNLHDALSVFEAISK 324
L AC+ AL G H +++ F+ ++ + NSL+TMY++CS+L A VF+ +
Sbjct: 326 GLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEA 385
Query: 325 NANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQ 384
N+ L +WN+I+S ++++ ET L K+ML S PN IT+ ++L A + +L+ G +
Sbjct: 386 NS-LSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKE 444
Query: 385 VHCFSVKSGLVLDVSVS-NGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSG 443
HC+ ++ D + N L+DMYAK G +I A+RVFDS + ++++SLI GY G
Sbjct: 445 FHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLG 504
Query: 444 LGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHF 503
G AL F+ M G++P+ VT V VLSACSH LV EG L+ ME GI EH+
Sbjct: 505 KGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHY 564
Query: 504 SCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTLLSSCKTHGNVDIAERAAEN-ILKLD 562
SCMVDL RAG L +A ++P TLL +C HGN +I E AA+ +L+
Sbjct: 565 SCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETK 624
Query: 563 PSNSAALVLLSSIHASAGNWEDVAKLRKVLDD 594
P + +LL+ ++A G+W + ++ +L D
Sbjct: 625 PEHLGHYMLLADMYAVTGSWSKLVTVKTLLSD 656
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 120/466 (25%), Positives = 215/466 (46%), Gaps = 51/466 (10%)
Query: 2 YGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTF 61
Y + +A+ + + + + + W +I Y +N + E+V +Y +M+ G D+ T+
Sbjct: 128 YSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTY 187
Query: 62 GSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISI 121
S+IKAC D GR +H + S +L N LISMY FG+V A +F +S
Sbjct: 188 PSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSE 247
Query: 122 KDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGV--------------YQPNEFV----- 162
+D +SW+++I +T EA L M GV + ++
Sbjct: 248 RDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNC 307
Query: 163 ----------LGSV-----FSACSSLLEPEYGRQIHGI----CAKFGLVRNVFSGCSLCD 203
+GSV ACS + ++G+ H + C+ + NV + SL
Sbjct: 308 VVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRN--SLIT 365
Query: 204 MYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSIT 263
MY++C L A F Q+E+ L +WN+II+ FA + + E + ++M+ G P+ IT
Sbjct: 366 MYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHIT 425
Query: 264 FLSLLCACTSPMALNQGMQIHSYIVKVGFNKE-VALYNSLLTMYTKCSNLHDALSVFEAI 322
S+L L G + H YI++ K+ + L+NSL+ MY K + A VF+++
Sbjct: 426 LASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSM 485
Query: 323 SKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVG 382
K + V++ +++ + + FK M S KP+ +T+ +L C+ + G
Sbjct: 486 RKR-DKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREG 544
Query: 383 NQV-----HCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDS 423
+ + H F G+ L + + ++D+Y + G + A+ +F +
Sbjct: 545 HWLFTKMEHVF----GIRLRLEHYSCMVDLYCRAGYLDKARDIFHT 586
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 100/384 (26%), Positives = 172/384 (44%), Gaps = 48/384 (12%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
MY + G + AR++FD M R+ VSW ++I+ Y+ + EA + +M SG +T
Sbjct: 228 MYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVT 287
Query: 61 FGSI-----------------------------------IKACCIAGDIYLGRQLHAHVI 85
+ +I +KAC G + G+ H VI
Sbjct: 288 WNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVI 347
Query: 86 KSGFGGHLV--AQNGLISMYTNFGQVAHASDVFTMISIKDLISWSSMIRGFTQLGYEIEA 143
+S H + +N LI+MY+ + HA VF + L +W+S+I GF E
Sbjct: 348 RSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEET 407
Query: 144 LYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFSGC---- 199
+L ++ML G + PN L S+ + + ++G++ H C + L R + C
Sbjct: 408 SFLLKEMLLSG-FHPNHITLASILPLFARVGNLQHGKEFH--C--YILRRQSYKDCLILW 462
Query: 200 -SLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLI 258
SL DMYAK G + +AK F + D V++ ++I + G A++ F+ M G+
Sbjct: 463 NSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIK 522
Query: 259 PDSITFLSLLCACTSPMALNQGMQIHSYIVKV-GFNKEVALYNSLLTMYTKCSNLHDALS 317
PD +T +++L AC+ + +G + + + V G + Y+ ++ +Y + L A
Sbjct: 523 PDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARD 582
Query: 318 VFEAISKNANLVSWNAILSACLQH 341
+F I + +L ACL H
Sbjct: 583 IFHTIPYEPSSAMCATLLKACLIH 606
Score = 132 bits (331), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 105/437 (24%), Positives = 192/437 (43%), Gaps = 50/437 (11%)
Query: 159 NEFVL---GSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAK 215
+EFVL S+ S C E G+Q+H C GL + L Y+ L A+
Sbjct: 79 HEFVLYSSASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQ 138
Query: 216 TAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPM 275
T E + WN +I ++ + E++S++++MM G+ D T+ S++ AC + +
Sbjct: 139 TITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALL 198
Query: 276 ALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAIL 335
G +H I + + N+L++MY + + A +F+ +S+ + VSWNAI+
Sbjct: 199 DFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSER-DAVSWNAII 257
Query: 336 SACLQHKQAGETFRLFKQMLFSENKPNMIT------------------------------ 365
+ ++ GE F+L +M S + +++T
Sbjct: 258 NCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVR 317
Query: 366 -----ITNLLGTCAELASLEVGNQVHCFSVKS-GLVLDV-SVSNGLIDMYAKCGSVIHAQ 418
+ N L C+ + +L+ G HC ++S D+ +V N LI MY++C + HA
Sbjct: 318 IGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAF 377
Query: 419 RVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIG 478
VF E ++ +W+S+I G+A + E L ++M G PN +T +L + +G
Sbjct: 378 IVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVG 437
Query: 479 LVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDP----DITT 534
++ G + + ++ +VD+ A++G E K FD D T
Sbjct: 438 NLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSG-----EIIAAKRVFDSMRKRDKVT 492
Query: 535 WKTLLSSCKTHGNVDIA 551
+ +L+ G ++A
Sbjct: 493 YTSLIDGYGRLGKGEVA 509
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 69/140 (49%), Gaps = 2/140 (1%)
Query: 338 CLQHKQAGETFRLFKQMLFSENKPNMITIT--NLLGTCAELASLEVGNQVHCFSVKSGLV 395
C+ H Q E FR F + + + + +LL TC G Q+H + SGL
Sbjct: 56 CISHGQLYEAFRTFSLLRYQSGSHEFVLYSSASLLSTCVGFNEFVPGQQLHAHCISSGLE 115
Query: 396 LDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKM 455
D + L+ Y+ + AQ + +++E + + W+ LI Y + E+++++++M
Sbjct: 116 FDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRM 175
Query: 456 RNLGVRPNEVTYVGVLSACS 475
+ G+R +E TY V+ AC+
Sbjct: 176 MSKGIRADEFTYPSVIKACA 195
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 285 bits (728), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 171/524 (32%), Positives = 280/524 (53%), Gaps = 43/524 (8%)
Query: 116 FTMISIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLE 175
+++ L+ ++ M++ + L LF ++ QG+Y P+ F L V + L +
Sbjct: 3 MSLLQTPSLLMYNKMLKSLADGKSFTKVLALFGELRGQGLY-PDNFTLPVVLKSIGRLRK 61
Query: 176 PEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAA 235
G ++HG K GL + + SL MYA G + F ++ D+VSWN +I++
Sbjct: 62 VIEGEKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISS 121
Query: 236 FADSGDANEAISIFRQM-MHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNK 294
+ +G +AI +F++M L D T +S L AC++ L G +I+ ++V F
Sbjct: 122 YVGNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVV-TEFEM 180
Query: 295 EVALYNSLLTMYTKCSNLHDALSVFEAI-SKNA--------------------------- 326
V + N+L+ M+ KC L A +VF+++ KN
Sbjct: 181 SVRIGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSP 240
Query: 327 --NLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQ 384
++V W A+++ +Q + E LF+ M + +P+ + +LL CA+ +LE G
Sbjct: 241 VKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKW 300
Query: 385 VHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGL 444
+H + ++ + +D V L+DMYAKCG + A VF + + SW+SLI G AM+G+
Sbjct: 301 IHGYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGM 360
Query: 445 GHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFS 504
AL+L+ +M N+GVR + +T+V VL+AC+H G V EG ++++M E + P EH S
Sbjct: 361 SGRALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCS 420
Query: 505 CMVDLLARAGCLYEAETFIRKTGFDPD---ITTWKTLLSSCKTHGNVDIAERAAENILKL 561
C++DLL RAG L EAE I K + D + + +LLS+ + +GNV IAER AE + K+
Sbjct: 421 CLIDLLCRAGLLDEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIAERVAEKLEKV 480
Query: 562 DPSNSAALVLLSSIHASAGNWEDVAKLRKVLDDGYDPAQRLGIR 605
+ S+S+A LL+S++ASA WEDV +R+ + D LGIR
Sbjct: 481 EVSDSSAHTLLASVYASANRWEDVTNVRRKMKD-------LGIR 517
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 91/315 (28%), Positives = 159/315 (50%), Gaps = 34/315 (10%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLR-SGFFPDQL 59
MY G ++ +VFD M R+VVSW +IS Y NG+ +A+ ++ +M + S D+
Sbjct: 90 MYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNLKFDEG 149
Query: 60 TFGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISM----------------- 102
T S + AC ++ +G +++ V+ + F + N L+ M
Sbjct: 150 TIVSTLSACSALKNLEIGERIYRFVV-TEFEMSVRIGNALVDMFCKCGCLDKARAVFDSM 208
Query: 103 --------------YTNFGQVAHASDVFTMISIKDLISWSSMIRGFTQLGYEIEALYLFR 148
Y + G++ A +F +KD++ W++M+ G+ Q EAL LFR
Sbjct: 209 RDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFR 268
Query: 149 DMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKC 208
M G+ +P+ FVL S+ + C+ E G+ IHG + + + G +L DMYAKC
Sbjct: 269 CMQTAGI-RPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKC 327
Query: 209 GFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLL 268
G + +A FY+I+ D SW ++I A +G + A+ ++ +M ++G+ D+ITF+++L
Sbjct: 328 GCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAITFVAVL 387
Query: 269 CACTSPMALNQGMQI 283
AC + +G +I
Sbjct: 388 TACNHGGFVAEGRKI 402
Score = 145 bits (367), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 119/508 (23%), Positives = 215/508 (42%), Gaps = 74/508 (14%)
Query: 26 WTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTFGSIIKACCIAGDIYLGRQLHAHVI 85
+ M+ + + + ++ ++ G +PD T ++K+ + G ++H + +
Sbjct: 14 YNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHGYAV 73
Query: 86 KSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIKDLISWSSMIRGFTQLGYEIEALY 145
K+G N L+ MY + G++ VF + +D++SW+ +I + G +A+
Sbjct: 74 KAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIG 133
Query: 146 LFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHG-ICAKFGLVRNVFSGCSLCDM 204
+F+ M ++ + +E + S SACS+L E G +I+ + +F + +V G +L DM
Sbjct: 134 VFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTEFEM--SVRIGNALVDM 191
Query: 205 YAKCGFLPSAKTAFYQI-----------------------------ESP--DLVSWNAII 233
+ KCG L A+ F + SP D+V W A++
Sbjct: 192 FCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMM 251
Query: 234 AAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFN 293
+ +EA+ +FR M G+ PD+ +SLL C AL QG IH YI +
Sbjct: 252 NGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVT 311
Query: 294 KEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQ 353
+ + +L+ MY KC + AL VF I K + SW +++ + +G L+ +
Sbjct: 312 VDKVVGTALVDMYAKCGCIETALEVFYEI-KERDTASWTSLIYGLAMNGMSGRALDLYYE 370
Query: 354 MLFSENKPNMITITNLLGTCAELASLEVGNQV---------------HCFSV-----KSG 393
M + + IT +L C + G ++ HC + ++G
Sbjct: 371 MENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAG 430
Query: 394 LVLD----------------VSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSS--- 434
L+ + V V L+ G+V A+RV + E V S+
Sbjct: 431 LLDEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIAERVAEKLEKVEVSDSSAHTL 490
Query: 435 LIVGYAMSGLGHEALNLFRKMRNLGVRP 462
L YA + + N+ RKM++LG+R
Sbjct: 491 LASVYASANRWEDVTNVRRKMKDLGIRK 518
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 104/215 (48%), Gaps = 2/215 (0%)
Query: 2 YGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTF 61
Y G + +AR +F+ +++VV WT+M++GY Q + +EA+ ++ M +G PD
Sbjct: 223 YVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVL 282
Query: 62 GSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISI 121
S++ C G + G+ +H ++ ++ V L+ MY G + A +VF I
Sbjct: 283 VSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKE 342
Query: 122 KDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQ 181
+D SW+S+I G G AL L+ +M GV + + +V +AC+ GR+
Sbjct: 343 RDTASWTSLIYGLAMNGMSGRALDLYYEMENVGV-RLDAITFVAVLTACNHGGFVAEGRK 401
Query: 182 IHGICAKFGLVRNVFSGCS-LCDMYAKCGFLPSAK 215
I + V+ CS L D+ + G L A+
Sbjct: 402 IFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAE 436
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 285 bits (728), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 190/624 (30%), Positives = 301/624 (48%), Gaps = 97/624 (15%)
Query: 63 SIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFT----- 117
S + +C + D+ GRQ+H V+KSG + N +++MY +A A VF
Sbjct: 46 SALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHAKL 105
Query: 118 --------------------------MISIKDLISWSSMIRGFTQLGYEIEALYLFRDML 151
++ + +S++++I+G+ Q EA+ LFR+M
Sbjct: 106 DSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMR 165
Query: 152 RQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKC--- 208
G+ NE L +V SACS L R + + K L VF +L MY C
Sbjct: 166 NLGI-MLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCL 224
Query: 209 ----------------------------GFLPSAKTAFYQIESPDLVSWNAIIAAFADSG 240
G + A+ F QI D+VSW +I
Sbjct: 225 KDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKN 284
Query: 241 DANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYN 300
+EA+ + +M+ G+ P + + LL A + ++G+Q+H IVK GF+ L
Sbjct: 285 QLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQA 344
Query: 301 SLLTMYTKCSNLHDALSVFEA------ISKNA------------------------NLVS 330
+++ Y +++ AL FEA S+NA ++ S
Sbjct: 345 TIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFS 404
Query: 331 WNAILSACLQHKQAGETFRLFKQMLFSEN-KPNMITITNLLGTCAELASLEVGNQVHCFS 389
WNA++S Q LF++M+ S KP+ IT+ ++ + L SLE G + H +
Sbjct: 405 WNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYL 464
Query: 390 VKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTEN---PNVISWSSLIVGYAMSGLGH 446
S + + +++ +IDMYAKCGS+ A +F T+N + W+++I G A G
Sbjct: 465 NFSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAK 524
Query: 447 EALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCM 506
AL+L+ +++L ++PN +T+VGVLSAC H GLVE G + +M+ + GI P +H+ CM
Sbjct: 525 LALDLYSDLQSLPIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCM 584
Query: 507 VDLLARAGCLYEAETFIRKTGFDPDITTWKTLLSSCKTHGNVDIAERAAENILKLDPSNS 566
VDLL +AG L EA+ I+K D+ W LLS+ +THGNV+IAE AA + +DPS+
Sbjct: 585 VDLLGKAGRLEEAKEMIKKMPVKADVMIWGMLLSASRTHGNVEIAELAATELAAIDPSHG 644
Query: 567 AALVLLSSIHASAGNWEDVAKLRK 590
V+LS+++A AG WEDVA +R+
Sbjct: 645 GCKVMLSNVYADAGRWEDVALVRE 668
Score = 174 bits (441), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 130/503 (25%), Positives = 226/503 (44%), Gaps = 70/503 (13%)
Query: 2 YGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTF 61
Y + + DA ++FD M R+ VS+T++I GY+QN Q +EA+ ++ +M G +++T
Sbjct: 117 YVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMRNLGIMLNEVTL 176
Query: 62 GSIIKACCIAGDIYLGRQLHAHVIKSGFGG------------------------------ 91
++I AC G I+ R L + IK G
Sbjct: 177 ATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPE 236
Query: 92 -HLVAQNGLISMYTNFGQVAHASDVFTMISIKDLISWSSMIRGFTQLGYEIEALYLFRDM 150
+LV N +++ Y+ G + A ++F I+ KD++SW +MI G + EAL + +M
Sbjct: 237 RNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEM 296
Query: 151 LRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYA---- 206
LR G+ +P+E ++ + SA + + G Q+HG K G F ++ YA
Sbjct: 297 LRCGM-KPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSND 355
Query: 207 ---------------------------KCGFLPSAKTAFYQIESPDLVSWNAIIAAFADS 239
K G + A+ F Q D+ SWNA+I+ +A S
Sbjct: 356 IKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQS 415
Query: 240 GDANEAISIFRQMMHIGLI-PDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVAL 298
A+ +FR+M+ + PD+IT +S+ A +S +L +G + H Y+ L
Sbjct: 416 LSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNL 475
Query: 299 YNSLLTMYTKCSNLHDALSVFEAISK--NANLVSWNAILSACLQHKQAGETFRLFKQMLF 356
+++ MY KC ++ AL++F ++ + WNAI+ H A L+ +
Sbjct: 476 TAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQS 535
Query: 357 SENKPNMITITNLLGTCAELASLEVGNQVHCFSVKS--GLVLDVSVSNGLIDMYAKCGSV 414
KPN IT +L C +E+G + + S+KS G+ D+ ++D+ K G +
Sbjct: 536 LPIKPNSITFVGVLSACCHAGLVELG-KTYFESMKSDHGIEPDIKHYGCMVDLLGKAGRL 594
Query: 415 IHAQRVFDSTE-NPNVISWSSLI 436
A+ + +V+ W L+
Sbjct: 595 EEAKEMIKKMPVKADVMIWGMLL 617
Score = 166 bits (419), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 115/407 (28%), Positives = 181/407 (44%), Gaps = 66/407 (16%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNG----------------------- 37
MY C +KDAR++FD M RN+V+W M++GYS+ G
Sbjct: 217 MYCLCLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTM 276
Query: 38 --------QGNEAVVMYIQMLRSGFFPDQLTFGSIIKACCIAGDIYLGRQLHAHVIKSGF 89
Q +EA+V Y +MLR G P ++ ++ A + G QLH ++K GF
Sbjct: 277 IDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGF 336
Query: 90 G-------------------------------GHLVAQNGLISMYTNFGQVAHASDVFTM 118
H+ ++N LI+ + G V A +VF
Sbjct: 337 DCYDFLQATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQ 396
Query: 119 ISIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEY 178
KD+ SW++MI G+ Q AL+LFR+M+ +P+ + SVFSA SSL E
Sbjct: 397 THDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEE 456
Query: 179 GRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQ---IESPDLVSWNAIIAA 235
G++ H + N ++ DMYAKCG + +A F+Q I S + WNAII
Sbjct: 457 GKRAHDYLNFSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICG 516
Query: 236 FADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQ-IHSYIVKVGFNK 294
A G A A+ ++ + + + P+SITF+ +L AC + G S G
Sbjct: 517 SATHGHAKLALDLYSDLQSLPIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEP 576
Query: 295 EVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQH 341
++ Y ++ + K L +A + + + A+++ W +LSA H
Sbjct: 577 DIKHYGCMVDLLGKAGRLEEAKEMIKKMPVKADVMIWGMLLSASRTH 623
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 125/494 (25%), Positives = 205/494 (41%), Gaps = 98/494 (19%)
Query: 154 GVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPS 213
G E L S +C+S + GRQIH K GL N + S+ +MYAKC L
Sbjct: 35 GESSDTERALVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLAD 94
Query: 214 AKTAFYQIESPD-------------------------------LVSWNAIIAAFADSGDA 242
A++ F D VS+ +I +A +
Sbjct: 95 AESVFRDHAKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQW 154
Query: 243 NEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSL 302
+EA+ +FR+M ++G++ + +T +++ AC+ + + S +K+ V + +L
Sbjct: 155 SEAMELFREMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNL 214
Query: 303 LTMYTKCSNLHDALSVFEAISKNANLVSWNAILS-------------------------- 336
L MY C L DA +F+ + + NLV+WN +L+
Sbjct: 215 LHMYCLCLCLKDARKLFDEMPER-NLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSW 273
Query: 337 -----ACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVK 391
CL+ Q E + +ML KP+ + + +LL A G Q+H VK
Sbjct: 274 GTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVK 333
Query: 392 SGL------------------------------VLD-VSVSNGLIDMYAKCGSVIHAQRV 420
G V D ++ N LI + K G V A+ V
Sbjct: 334 RGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREV 393
Query: 421 FDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKM-RNLGVRPNEVTYVGVLSACSHIGL 479
FD T + ++ SW+++I GYA S AL+LFR+M + V+P+ +T V V SA S +G
Sbjct: 394 FDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGS 453
Query: 480 VEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTG--FDPDITTWKT 537
+EEG ++ + IPP + ++D+ A+ G + A +T I+ W
Sbjct: 454 LEEGKRAHDYLNFST-IPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNA 512
Query: 538 LLSSCKTHGNVDIA 551
++ THG+ +A
Sbjct: 513 IICGSATHGHAKLA 526
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 284 bits (726), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 175/623 (28%), Positives = 303/623 (48%), Gaps = 80/623 (12%)
Query: 2 YGKCGSMKDARQVFDAMHLR--------------------------------NVVSWTSM 29
Y + G M A QVFD M +R N VS+ +M
Sbjct: 91 YAENGKMSKAWQVFDEMPVRVTTSYNAMITAMIKNKCDLGKAYELFCDIPEKNAVSYATM 150
Query: 30 ISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTFGSIIKACCIAGDIYLGRQLHAHVIKSGF 89
I+G+ + G+ +EA +Y + F D S+ ++G + G+ A + G
Sbjct: 151 ITGFVRAGRFDEAEFLYAETPVK--FRD-----SVASNVLLSGYLRAGKWNEAVRVFQGM 203
Query: 90 G-GHLVAQNGLISMYTNFGQVAHASDVFTMISIKDLISWSSMIRGFTQLGYEIEALYLFR 148
+V+ + ++ Y G++ A +F ++ +++I+W++MI G+ + G+ + LF
Sbjct: 204 AVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFL 263
Query: 149 DMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKC 208
M ++G + N L +F AC + G QIHG+ ++ L ++F G SL MY+K
Sbjct: 264 RMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKL 323
Query: 209 GFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLL 268
G++ AK F +++ D VSWN++I +EA +F +M
Sbjct: 324 GYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKM---------------- 367
Query: 269 CACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANL 328
P K++ + ++ ++ + + +F + + N
Sbjct: 368 -----P------------------GKDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDN- 403
Query: 329 VSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCF 388
++W A++SA + + E F +ML E PN T +++L A LA L G Q+H
Sbjct: 404 ITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGR 463
Query: 389 SVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEA 448
VK +V D+SV N L+ MY KCG+ A ++F PN++S++++I GY+ +G G +A
Sbjct: 464 VVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKA 523
Query: 449 LNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVD 508
L LF + + G PN VT++ +LSAC H+G V+ GW + +M+ I P +H++CMVD
Sbjct: 524 LKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYACMVD 583
Query: 509 LLARAGCLYEAETFIRKTGFDPDITTWKTLLSSCKTHGNVDIAERAAENILKLDPSNSAA 568
LL R+G L +A I P W +LLS+ KTH VD+AE AA+ +++L+P ++
Sbjct: 584 LLGRSGLLDDASNLISTMPCKPHSGVWGSLLSASKTHLRVDLAELAAKKLIELEPDSATP 643
Query: 569 LVLLSSIHASAGNWEDVAKLRKV 591
V+LS +++ G D ++ +
Sbjct: 644 YVVLSQLYSIIGKNRDCDRIMNI 666
Score = 152 bits (384), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 117/500 (23%), Positives = 222/500 (44%), Gaps = 120/500 (24%)
Query: 2 YGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQM----------LR 51
+ + G++++A +F M R++VSW +MIS Y++NG+ ++A ++ +M +
Sbjct: 60 HARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPVRVTTSYNAMI 119
Query: 52 SGFFPDQLTFGSIIKACC-------------IAGDIYLGR-----------------QLH 81
+ ++ G + C I G + GR +
Sbjct: 120 TAMIKNKCDLGKAYELFCDIPEKNAVSYATMITGFVRAGRFDEAEFLYAETPVKFRDSVA 179
Query: 82 AHVIKSG-------------FGG----HLVAQNGLISMYTNFGQVAHASDVFTMISIKDL 124
++V+ SG F G +V+ + ++ Y G++ A +F ++ +++
Sbjct: 180 SNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTERNV 239
Query: 125 ISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHG 184
I+W++MI G+ + G+ + LF M ++G + N L +F AC + G QIHG
Sbjct: 240 ITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHG 299
Query: 185 ICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANE 244
+ ++ L ++F G SL MY+K G++ AK F +++ D VSWN++I +E
Sbjct: 300 LVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISE 359
Query: 245 AISIFRQMMH-------------------------IGLIP--DSITFLSLLCA------- 270
A +F +M G++P D+IT+ +++ A
Sbjct: 360 AYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNITWTAMISAFVSNGYY 419
Query: 271 ---------------------------CTSPMA-LNQGMQIHSYIVKVGFNKEVALYNSL 302
T+ +A L +G+QIH +VK+ ++++ NSL
Sbjct: 420 EEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSL 479
Query: 303 LTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPN 362
++MY KC N +DA +F IS+ N+VS+N ++S + + +LF + S +PN
Sbjct: 480 VSMYCKCGNTNDAYKIFSCISE-PNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPN 538
Query: 363 MITITNLLGTCAELASLEVG 382
+T LL C + +++G
Sbjct: 539 GVTFLALLSACVHVGYVDLG 558
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 97/455 (21%), Positives = 185/455 (40%), Gaps = 70/455 (15%)
Query: 195 VFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQM-- 252
+F S +A+ G L A+ F Q+ + +VSW A+I+A+A++G ++A +F +M
Sbjct: 50 IFQCNSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPV 109
Query: 253 --------MHIGLIPDSITF---LSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALY-- 299
M +I + L C A++ I ++ F++ LY
Sbjct: 110 RVTTSYNAMITAMIKNKCDLGKAYELFCDIPEKNAVSYATMITGFVRAGRFDEAEFLYAE 169
Query: 300 -----------NSLLTMYTKCSNLHDALSVFEAIS------------------------- 323
N LL+ Y + ++A+ VF+ ++
Sbjct: 170 TPVKFRDSVASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARS 229
Query: 324 -----KNANLVSWNAILSACLQHKQAGETFRLFKQMLFSEN-KPNMITITNLLGTCAELA 377
N+++W A++ + + F LF +M + K N T+ + C +
Sbjct: 230 LFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFV 289
Query: 378 SLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIV 437
G+Q+H + L D+ + N L+ MY+K G + A+ VF +N + +SW+SLI
Sbjct: 290 RYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLIT 349
Query: 438 GYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIP 497
G EA LF KM + V++ ++ S G + + L+ M E+ I
Sbjct: 350 GLVQRKQISEAYELFEKMPG----KDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNIT 405
Query: 498 PAREHFSCMVDLLARAGCLYEAETFIRK---TGFDPDITTWKTLLSSCKTHGNVDIAERA 554
++ M+ G EA + K P+ T+ ++LS+ + ++ +
Sbjct: 406 -----WTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQI 460
Query: 555 AENILKLDPSNSAALV-LLSSIHASAGNWEDVAKL 588
++K++ N ++ L S++ GN D K+
Sbjct: 461 HGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKI 495
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 49/77 (63%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
MY KCG+ DA ++F + N+VS+ +MISGYS NG G +A+ ++ + SG P+ +T
Sbjct: 482 MYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVT 541
Query: 61 FGSIIKACCIAGDIYLG 77
F +++ AC G + LG
Sbjct: 542 FLALLSACVHVGYVDLG 558
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 283 bits (723), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 160/491 (32%), Positives = 264/491 (53%), Gaps = 8/491 (1%)
Query: 108 QVAHASDVFTMISIKDLISWSSMIRGFT---QLGYEIEALYLFRDMLRQGVYQPNEFVLG 164
Q +A + + + W S+I F+ L + L +R M R GV P+
Sbjct: 51 QFRYARRLLCQLQTLSIQLWDSLIGHFSGGITLNRRLSFL-AYRHMRRNGVI-PSRHTFP 108
Query: 165 SVFSACSSLLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESP 224
+ A L + Q H KFGL + F SL Y+ G A F E
Sbjct: 109 PLLKAVFKLRDSN-PFQFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDK 167
Query: 225 DLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIH 284
D+V+W A+I F +G A+EA+ F +M G+ + +T +S+L A + G +H
Sbjct: 168 DVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVH 227
Query: 285 SYIVKVGFNK-EVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQ 343
++ G K +V + +SL+ MY KCS DA VF+ + + N+V+W A+++ +Q +
Sbjct: 228 GLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMP-SRNVVTWTALIAGYVQSRC 286
Query: 344 AGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNG 403
+ +F++ML S+ PN T++++L CA + +L G +VHC+ +K+ + ++ +
Sbjct: 287 FDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTT 346
Query: 404 LIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPN 463
LID+Y KCG + A VF+ NV +W+++I G+A G +A +LF M + V PN
Sbjct: 347 LIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPN 406
Query: 464 EVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFI 523
EVT++ VLSAC+H GLVEEG L+ +M+ + P +H++CMVDL R G L EA+ I
Sbjct: 407 EVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALI 466
Query: 524 RKTGFDPDITTWKTLLSSCKTHGNVDIAERAAENILKLDPSNSAALVLLSSIHASAGNWE 583
+ +P W L SC H + ++ + AA ++KL PS+S LL+++++ + NW+
Sbjct: 467 ERMPMEPTNVVWGALFGSCLLHKDYELGKYAASRVIKLQPSHSGRYTLLANLYSESQNWD 526
Query: 584 DVAKLRKVLDD 594
+VA++RK + D
Sbjct: 527 EVARVRKQMKD 537
Score = 199 bits (506), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 126/432 (29%), Positives = 219/432 (50%), Gaps = 10/432 (2%)
Query: 11 ARQVFDAMHLRNVVSWTSMISGYSQNGQGNE--AVVMYIQMLRSGFFPDQLTFGSIIKAC 68
AR++ + ++ W S+I +S N + + Y M R+G P + TF ++KA
Sbjct: 55 ARRLLCQLQTLSIQLWDSLIGHFSGGITLNRRLSFLAYRHMRRNGVIPSRHTFPPLLKAV 114
Query: 69 CIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIKDLISWS 128
D Q HAH++K G +N LIS Y++ G AS +F KD+++W+
Sbjct: 115 FKLRDSN-PFQFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWT 173
Query: 129 SMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAK 188
+MI GF + G EA+ F +M + GV NE + SV A + + +GR +HG+ +
Sbjct: 174 AMIDGFVRNGSASEAMVYFVEMKKTGV-AANEMTVVSVLKAAGKVEDVRFGRSVHGLYLE 232
Query: 189 FGLVR-NVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAIS 247
G V+ +VF G SL DMY KC A+ F ++ S ++V+W A+IA + S ++ +
Sbjct: 233 TGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGML 292
Query: 248 IFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYT 307
+F +M+ + P+ T S+L AC AL++G ++H Y++K +L+ +Y
Sbjct: 293 VFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYV 352
Query: 308 KCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITIT 367
KC L +A+ VFE + + N+ +W A+++ H A + F LF ML S PN +T
Sbjct: 353 KCGCLEEAILVFERLHEK-NVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFM 411
Query: 368 NLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSN--GLIDMYAKCGSVIHAQRVFDSTE 425
+L CA +E G ++ S+K ++ + ++D++ + G + A+ + +
Sbjct: 412 AVLSACAHGGLVEEGRRLF-LSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMP 470
Query: 426 -NPNVISWSSLI 436
P + W +L
Sbjct: 471 MEPTNVVWGALF 482
Score = 171 bits (433), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 98/345 (28%), Positives = 180/345 (52%), Gaps = 5/345 (1%)
Query: 2 YGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTF 61
Y G A ++FD ++VV+WT+MI G+ +NG +EA+V +++M ++G +++T
Sbjct: 148 YSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTV 207
Query: 62 GSIIKACCIAGDIYLGRQLHAHVIKSG-FGGHLVAQNGLISMYTNFGQVAHASDVFTMIS 120
S++KA D+ GR +H +++G + + L+ MY A VF +
Sbjct: 208 VSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMP 267
Query: 121 IKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGR 180
+++++W+++I G+ Q + + +F +ML+ V PNE L SV SAC+ + GR
Sbjct: 268 SRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDV-APNEKTLSSVLSACAHVGALHRGR 326
Query: 181 QIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSG 240
++H K + N +G +L D+Y KCG L A F ++ ++ +W A+I FA G
Sbjct: 327 RVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHG 386
Query: 241 DANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVAL-- 298
A +A +F M+ + P+ +TF+++L AC + +G ++ +K FN E
Sbjct: 387 YARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLF-LSMKGRFNMEPKADH 445
Query: 299 YNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQ 343
Y ++ ++ + L +A ++ E + V W A+ +CL HK
Sbjct: 446 YACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGALFGSCLLHKD 490
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 77/237 (32%), Positives = 128/237 (54%), Gaps = 3/237 (1%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
MYGKC DA++VFD M RNVV+WT++I+GY Q+ ++ ++++ +ML+S P++ T
Sbjct: 249 MYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKT 308
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMIS 120
S++ AC G ++ GR++H ++IK+ + A LI +Y G + A VF +
Sbjct: 309 LSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLH 368
Query: 121 IKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGR 180
K++ +W++MI GF GY +A LF ML V PNE +V SAC+ E GR
Sbjct: 369 EKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHV-SPNEVTFMAVLSACAHGGLVEEGR 427
Query: 181 QIH-GICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIE-SPDLVSWNAIIAA 235
++ + +F + + D++ + G L AK ++ P V W A+ +
Sbjct: 428 RLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGALFGS 484
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 281 bits (719), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 160/520 (30%), Positives = 279/520 (53%), Gaps = 8/520 (1%)
Query: 79 QLHAHVIKSG--FGGHLVAQNGLISMYTNFGQVAHASDVFTMISIKDLISWSSMIRGFTQ 136
Q+HA VI +G G ++++ LI+ G++++A VF + + + ++SMI +++
Sbjct: 35 QIHAFVISTGNLLNGSSISRD-LIASCGRIGEISYARKVFDELPQRGVSVYNSMIVVYSR 93
Query: 137 LGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVF 196
E L L+ M+ + + QP+ AC S L E G + FG +VF
Sbjct: 94 GKNPDEVLRLYDQMIAEKI-QPDSSTFTMTIKACLSGLVLEKGEAVWCKAVDFGYKNDVF 152
Query: 197 SGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIG 256
S+ ++Y KCG + A+ F ++ D++ W ++ FA +G + +A+ +R+M + G
Sbjct: 153 VCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEG 212
Query: 257 LIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDAL 316
D + L LL A G +H Y+ + G V + SL+ MY K + A
Sbjct: 213 FGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVAS 272
Query: 317 SVFEAIS-KNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAE 375
VF + K A VSW +++S Q+ A + F +M +P+++T+ +L C++
Sbjct: 273 RVFSRMMFKTA--VSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQ 330
Query: 376 LASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSL 435
+ SL+ G VHC+ +K VLD + L+DMY+KCG++ ++ +F+ +++ W+++
Sbjct: 331 VGSLKTGRLVHCYILKRH-VLDRVTATALMDMYSKCGALSSSREIFEHVGRKDLVCWNTM 389
Query: 436 IVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELG 495
I Y + G G E ++LF KM + P+ T+ +LSA SH GLVE+G + ++ M +
Sbjct: 390 ISCYGIHGNGQEVVSLFLKMTESNIEPDHATFASLLSALSHSGLVEQGQHWFSVMINKYK 449
Query: 496 IPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTLLSSCKTHGNVDIAERAA 555
I P+ +H+ C++DLLARAG + EA I D + W LLS C H N+ + + AA
Sbjct: 450 IQPSEKHYVCLIDLLARAGRVEEALDMINSEKLDNALPIWVALLSGCINHRNLSVGDIAA 509
Query: 556 ENILKLDPSNSAALVLLSSIHASAGNWEDVAKLRKVLDDG 595
IL+L+P + L+S+ A+A W++VAK+RK++ +G
Sbjct: 510 NKILQLNPDSIGIQTLVSNFFATANKWKEVAKVRKLMRNG 549
Score = 206 bits (523), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 134/440 (30%), Positives = 219/440 (49%), Gaps = 9/440 (2%)
Query: 3 GKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTFG 62
G+ G + AR+VFD + R V + SMI YS+ +E + +Y QM+ PD TF
Sbjct: 61 GRIGEISYARKVFDELPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQPDSSTFT 120
Query: 63 SIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIK 122
IKAC + G + + G+ + + ++++Y G++ A +F ++ +
Sbjct: 121 MTIKACLSGLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKR 180
Query: 123 DLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQI 182
D+I W++M+ GF Q G ++A+ +R+M +G + +LG + A L + + GR +
Sbjct: 181 DVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLG-LLQASGDLGDTKMGRSV 239
Query: 183 HGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDA 242
HG + GL NV SL DMYAK GF+ A F ++ VSW ++I+ FA +G A
Sbjct: 240 HGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQNGLA 299
Query: 243 NEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSL 302
N+A +M +G PD +T + +L AC+ +L G +H YI+K V +L
Sbjct: 300 NKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRHVLDRVTA-TAL 358
Query: 303 LTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPN 362
+ MY+KC L + +FE + + +LV WN ++S H E LF +M S +P+
Sbjct: 359 MDMYSKCGALSSSREIFEHVGRK-DLVCWNTMISCYGIHGNGQEVVSLFLKMTESNIEPD 417
Query: 363 MITITNLLGTCAELASLEVGNQVHCFSV---KSGLVLDVSVSNGLIDMYAKCGSVIHAQR 419
T +LL + +E G H FSV K + LID+ A+ G V A
Sbjct: 418 HATFASLLSALSHSGLVEQGQ--HWFSVMINKYKIQPSEKHYVCLIDLLARAGRVEEALD 475
Query: 420 VFDSTENPNVIS-WSSLIVG 438
+ +S + N + W +L+ G
Sbjct: 476 MINSEKLDNALPIWVALLSG 495
Score = 189 bits (480), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 107/343 (31%), Positives = 178/343 (51%), Gaps = 3/343 (0%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
+Y KCG M +A +F M R+V+ WT+M++G++Q G+ +AV Y +M GF D++
Sbjct: 160 LYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVV 219
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMIS 120
+++A GD +GR +H ++ ++G ++V + L+ MY G + AS VF+ +
Sbjct: 220 MLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMM 279
Query: 121 IKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGR 180
K +SW S+I GF Q G +A +M G +QP+ L V ACS + + GR
Sbjct: 280 FKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLG-FQPDLVTLVGVLVACSQVGSLKTGR 338
Query: 181 QIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSG 240
+H K ++ V + +L DMY+KCG L S++ F + DLV WN +I+ + G
Sbjct: 339 LVHCYILKRHVLDRV-TATALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHG 397
Query: 241 DANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIV-KVGFNKEVALY 299
+ E +S+F +M + PD TF SLL A + + QG S ++ K Y
Sbjct: 398 NGQEVVSLFLKMTESNIEPDHATFASLLSALSHSGLVEQGQHWFSVMINKYKIQPSEKHY 457
Query: 300 NSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHK 342
L+ + + + +AL + + + L W A+LS C+ H+
Sbjct: 458 VCLIDLLARAGRVEEALDMINSEKLDNALPIWVALLSGCINHR 500
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 281 bits (719), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 169/587 (28%), Positives = 293/587 (49%), Gaps = 57/587 (9%)
Query: 4 KCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTFGS 63
+ G + +AR+ FD++ + + SW S++SGY NG EA ++ +M
Sbjct: 29 RIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSER----------- 77
Query: 64 IIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIKD 123
++V+ NGL+S Y + A +VF ++ ++
Sbjct: 78 ----------------------------NVVSWNGLVSGYIKNRMIVEARNVFELMPERN 109
Query: 124 LISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIH 183
++SW++M++G+ Q G EA LF M + NE +F + R+++
Sbjct: 110 VVSWTAMVKGYMQEGMVGEAESLFWRMPER-----NEVSWTVMFGGLIDDGRIDKARKLY 164
Query: 184 GICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDAN 243
+ V++V + ++ + G + A+ F ++ ++V+W +I + N
Sbjct: 165 DMMP----VKDVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQ----N 216
Query: 244 EAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLL 303
+ + R++ + +++ S+L T L+ ++ +V K V N+++
Sbjct: 217 NRVDVARKLFEVMPEKTEVSWTSMLLGYT----LSGRIEDAEEFFEVMPMKPVIACNAMI 272
Query: 304 TMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNM 363
+ + + A VF+ + N +W ++ A + E LF QM +P+
Sbjct: 273 VGFGEVGEISKARRVFDLMEDRDN-ATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSF 331
Query: 364 ITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDS 423
++ ++L CA LASL+ G QVH V+ DV V++ L+ MY KCG ++ A+ VFD
Sbjct: 332 PSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDR 391
Query: 424 TENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEG 483
+ ++I W+S+I GYA GLG EAL +F +M + G PN+VT + +L+ACS+ G +EEG
Sbjct: 392 FSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEG 451
Query: 484 WNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTLLSSCK 543
++ +ME + + P EH+SC VD+L RAG + +A I PD T W LL +CK
Sbjct: 452 LEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACK 511
Query: 544 THGNVDIAERAAENILKLDPSNSAALVLLSSIHASAGNWEDVAKLRK 590
TH +D+AE AA+ + + +P N+ VLLSSI+AS W DVA +RK
Sbjct: 512 THSRLDLAEVAAKKLFENEPDNAGTYVLLSSINASRSKWGDVAVVRK 558
Score = 162 bits (411), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 118/439 (26%), Positives = 208/439 (47%), Gaps = 24/439 (5%)
Query: 2 YGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTF 61
Y K + +AR VF+ M RNVVSWT+M+ GY Q G EA ++ +M + F
Sbjct: 89 YIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEVSWTVMF 148
Query: 62 GSIIKACCIAGDIYLGRQLHAHV-IKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMIS 120
G +I G I R+L+ + +K +VA +I G+V A +F +
Sbjct: 149 GGLID----DGRIDKARKLYDMMPVKD-----VVASTNMIGGLCREGRVDEARLIFDEMR 199
Query: 121 IKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGR 180
+++++W++MI G+ Q A LF M + +LG S E
Sbjct: 200 ERNVVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLSG-----RIEDAE 254
Query: 181 QIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSG 240
+ + ++ V + ++ + + G + A+ F +E D +W +I A+ G
Sbjct: 255 EFFEVMP----MKPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKG 310
Query: 241 DANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYN 300
EA+ +F QM G+ P + +S+L C + +L G Q+H+++V+ F+ +V + +
Sbjct: 311 FELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVAS 370
Query: 301 SLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENK 360
L+TMY KC L A VF+ S + +++ WN+I+S H E ++F +M S
Sbjct: 371 VLMTMYVKCGELVKAKLVFDRFS-SKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTM 429
Query: 361 PNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSN--GLIDMYAKCGSVIHAQ 418
PN +T+ +L C+ LE G ++ S++S + +V + +DM + G V A
Sbjct: 430 PNKVTLIAILTACSYAGKLEEGLEIF-ESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAM 488
Query: 419 RVFDS-TENPNVISWSSLI 436
+ +S T P+ W +L+
Sbjct: 489 ELIESMTIKPDATVWGALL 507
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 76/239 (31%), Positives = 118/239 (49%), Gaps = 9/239 (3%)
Query: 2 YGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTF 61
+G+ G + AR+VFD M R+ +W MI Y + G EA+ ++ QM + G P +
Sbjct: 275 FGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSL 334
Query: 62 GSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISI 121
SI+ C + GRQ+HAH+++ F + + L++MY G++ A VF S
Sbjct: 335 ISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSS 394
Query: 122 KDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQ 181
KD+I W+S+I G+ G EAL +F +M G PN+ L ++ +ACS + E G +
Sbjct: 395 KDIIMWNSIISGYASHGLGEEALKIFHEMPSSGT-MPNKVTLIAILTACSYAGKLEEGLE 453
Query: 182 I-HGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIES----PDLVSWNAIIAA 235
I + +KF + V DM + G A IES PD W A++ A
Sbjct: 454 IFESMESKFCVTPTVEHYSCTVDMLGRAG---QVDKAMELIESMTIKPDATVWGALLGA 509
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/343 (20%), Positives = 139/343 (40%), Gaps = 62/343 (18%)
Query: 206 AKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFL 265
++ G + A+ F ++ + SWN+I++ + +G EA +F +M
Sbjct: 28 SRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSE----------- 76
Query: 266 SLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKN 325
+ V +N L++ Y K + +A +VFE + +
Sbjct: 77 ----------------------------RNVVSWNGLVSGYIKNRMIVEARNVFELMPER 108
Query: 326 ANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQV 385
N+VSW A++ +Q GE LF +M + N ++ T + G + ++ ++
Sbjct: 109 -NVVSWTAMVKGYMQEGMVGEAESLFWRM----PERNEVSWTVMFGGLIDDGRIDKARKL 163
Query: 386 HCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLG 445
+ V DV S +I + G V A+ +FD NV++W+++I GY +
Sbjct: 164 YDMMP----VKDVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNN-- 217
Query: 446 HEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSC 505
+++ RK+ + EV++ +L + G +E+ + M P + +C
Sbjct: 218 --RVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVM-------PMKPVIAC 268
Query: 506 --MVDLLARAGCLYEAETFIRKTGFDPDITTWKTLLSSCKTHG 546
M+ G + +A D D TW+ ++ + + G
Sbjct: 269 NAMIVGFGEVGEISKARRVFDLME-DRDNATWRGMIKAYERKG 310
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 74/134 (55%), Gaps = 4/134 (2%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
MY KCG + A+ VFD ++++ W S+ISGY+ +G G EA+ ++ +M SG P+++T
Sbjct: 375 MYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVT 434
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQN--GLISMYTNFGQVAHASDVFTM 118
+I+ AC AG + G ++ ++S F ++ + M GQV A ++
Sbjct: 435 LIAILTACSYAGKLEEGLEIFES-MESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIES 493
Query: 119 ISIK-DLISWSSMI 131
++IK D W +++
Sbjct: 494 MTIKPDATVWGALL 507
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 281 bits (719), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 153/471 (32%), Positives = 252/471 (53%), Gaps = 41/471 (8%)
Query: 123 DLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQI 182
D +++++RG+++ ++ +F +M+R+G P+ F V A + G Q+
Sbjct: 69 DAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQM 128
Query: 183 HGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDA 242
H K GL ++F G +L MY CG + A+ F ++ P+LV+WNA+I A D
Sbjct: 129 HCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGNDV 188
Query: 243 NEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSL 302
A IF +M+ ++ H+ +N +
Sbjct: 189 AGAREIFDKML---------------------------VRNHTS------------WNVM 209
Query: 303 LTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPN 362
L Y K L A +F + + VSW+ ++ + E+F F+++ + PN
Sbjct: 210 LAGYIKAGELESAKRIFSEMPHRDD-VSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPN 268
Query: 363 MITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFD 422
+++T +L C++ S E G +H F K+G VSV+N LIDMY++CG+V A+ VF+
Sbjct: 269 EVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFE 328
Query: 423 STENPN-VISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVE 481
+ ++SW+S+I G AM G G EA+ LF +M GV P+ ++++ +L ACSH GL+E
Sbjct: 329 GMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIE 388
Query: 482 EGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTLLSS 541
EG + ++ M+ I P EH+ CMVDL R+G L +A FI + P W+TLL +
Sbjct: 389 EGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGA 448
Query: 542 CKTHGNVDIAERAAENILKLDPSNSAALVLLSSIHASAGNWEDVAKLRKVL 592
C +HGN+++AE+ + + +LDP+NS LVLLS+ +A+AG W+DVA +RK +
Sbjct: 449 CSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYATAGKWKDVASIRKSM 499
Score = 153 bits (386), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 110/432 (25%), Positives = 188/432 (43%), Gaps = 68/432 (15%)
Query: 11 ARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGF-FPDQLTFGSIIKACC 69
AR++ + + +++ GYS++ + + +V ++++M+R GF FPD +F +IKA
Sbjct: 58 ARRLLLCFPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVE 117
Query: 70 IAGDIYLGRQLHAHVIKSG--------------FGG-----------------HLVAQNG 98
+ G Q+H +K G +GG +LVA N
Sbjct: 118 NFRSLRTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNA 177
Query: 99 LISM-------------------------------YTNFGQVAHASDVFTMISIKDLISW 127
+I+ Y G++ A +F+ + +D +SW
Sbjct: 178 VITACFRGNDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSW 237
Query: 128 SSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICA 187
S+MI G G E+ FR++ R G+ PNE L V SACS E+G+ +HG
Sbjct: 238 STMIVGIAHNGSFNESFLYFRELQRAGM-SPNEVSLTGVLSACSQSGSFEFGKILHGFVE 296
Query: 188 KFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPD-LVSWNAIIAAFADSGDANEAI 246
K G V +L DMY++CG +P A+ F ++ +VSW ++IA A G EA+
Sbjct: 297 KAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAV 356
Query: 247 SIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKV-GFNKEVALYNSLLTM 305
+F +M G+ PD I+F+SLL AC+ + +G S + +V E+ Y ++ +
Sbjct: 357 RLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDL 416
Query: 306 YTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHK--QAGETFRLFKQMLFSENKPNM 363
Y + L A + + W +L AC H + E + L N ++
Sbjct: 417 YGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDL 476
Query: 364 ITITNLLGTCAE 375
+ ++N T +
Sbjct: 477 VLLSNAYATAGK 488
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 96/380 (25%), Positives = 174/380 (45%), Gaps = 52/380 (13%)
Query: 181 QIHGICAKFGL-VRNVFSGCSLCDMYAKCGF-----LPSAKTAFYQIESPDLVSWNAIIA 234
QIHG+ K+G+ + F+G + C LP A+ PD +N ++
Sbjct: 23 QIHGLFIKYGVDTDSYFTG----KLILHCAISISDALPYARRLLLCFPEPDAFMFNTLVR 78
Query: 235 AFADSGDANEAISIFRQMMHIGLI-PDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFN 293
+++S + + ++++F +MM G + PDS +F ++ A + +L G Q+H +K G
Sbjct: 79 GYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQMHCQALKHGLE 138
Query: 294 KEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQ 353
+ + +L+ MY C + A VF+ + + NLV+WNA+++AC + +F +
Sbjct: 139 SHLFVGTTLIGMYGGCGCVEFARKVFDEMHQ-PNLVAWNAVITACFRGNDVAGAREIFDK 197
Query: 354 MLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGS 413
M LV + + N ++ Y K G
Sbjct: 198 M---------------------------------------LVRNHTSWNVMLAGYIKAGE 218
Query: 414 VIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSA 473
+ A+R+F + + +SWS++IVG A +G +E+ FR+++ G+ PNEV+ GVLSA
Sbjct: 219 LESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSA 278
Query: 474 CSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDIT 533
CS G E G L+ +E+ G + ++D+ +R G + A I
Sbjct: 279 CSQSGSFEFGKILHGFVEKA-GYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIV 337
Query: 534 TWKTLLSSCKTHGNVDIAER 553
+W ++++ HG + A R
Sbjct: 338 SWTSMIAGLAMHGQGEEAVR 357
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 127/261 (48%), Gaps = 18/261 (6%)
Query: 2 YGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTF 61
Y K G ++ A+++F M R+ VSW++MI G + NG NE+ + + ++ R+G P++++
Sbjct: 213 YIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSL 272
Query: 62 GSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFT-MIS 120
++ AC +G G+ LH V K+G+ + N LI MY+ G V A VF M
Sbjct: 273 TGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQE 332
Query: 121 IKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGR 180
+ ++SW+SMI G G EA+ LF +M GV P+ S+ ACS E G
Sbjct: 333 KRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGV-TPDGISFISLLHACSHAGLIEEGE 391
Query: 181 QIHGICAKFGLVRNVFS--------GCSLCDMYAKCGFLPSAKTAFYQIE-SPDLVSWNA 231
F ++ V+ GC + D+Y + G L A Q+ P + W
Sbjct: 392 DY------FSEMKRVYHIEPEIEHYGC-MVDLYGRSGKLQKAYDFICQMPIPPTAIVWRT 444
Query: 232 IIAAFADSGDANEAISIFRQM 252
++ A + G+ A + +++
Sbjct: 445 LLGACSSHGNIELAEQVKQRL 465
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 72/134 (53%), Gaps = 3/134 (2%)
Query: 1 MYGKCGSMKDARQVFDAMH-LRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQL 59
MY +CG++ AR VF+ M R +VSWTSMI+G + +GQG EAV ++ +M G PD +
Sbjct: 313 MYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGI 372
Query: 60 TFGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNG-LISMYTNFGQVAHASDVFTM 118
+F S++ AC AG I G + + + + G ++ +Y G++ A D
Sbjct: 373 SFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQ 432
Query: 119 ISIKDL-ISWSSMI 131
+ I I W +++
Sbjct: 433 MPIPPTAIVWRTLL 446
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 280 bits (717), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 140/381 (36%), Positives = 232/381 (60%), Gaps = 1/381 (0%)
Query: 214 AKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTS 273
A+ F + PD+V +N++ ++ + E S+F +++ G++PD+ TF SLL AC
Sbjct: 82 ARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAV 141
Query: 274 PMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNA 333
AL +G Q+H +K+G + V + +L+ MYT+C ++ A VF+ I + +V +NA
Sbjct: 142 AKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPC-VVCYNA 200
Query: 334 ILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSG 393
+++ + + E LF++M KPN IT+ ++L +CA L SL++G +H ++ K
Sbjct: 201 MITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHS 260
Query: 394 LVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFR 453
V V+ LIDM+AKCGS+ A +F+ + +WS++IV YA G +++ +F
Sbjct: 261 FCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFE 320
Query: 454 KMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARA 513
+MR+ V+P+E+T++G+L+ACSH G VEEG ++ M + GI P+ +H+ MVDLL+RA
Sbjct: 321 RMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRA 380
Query: 514 GCLYEAETFIRKTGFDPDITTWKTLLSSCKTHGNVDIAERAAENILKLDPSNSAALVLLS 573
G L +A FI K P W+ LL++C +H N+D+AE+ +E I +LD S+ V+LS
Sbjct: 381 GNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILS 440
Query: 574 SIHASAGNWEDVAKLRKVLDD 594
+++A WE V LRKV+ D
Sbjct: 441 NLYARNKKWEYVDSLRKVMKD 461
Score = 196 bits (498), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 115/338 (34%), Positives = 181/338 (53%), Gaps = 4/338 (1%)
Query: 6 GSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTFGSII 65
SM AR +F+AM ++V + SM GYS+ E +++++L G PD TF S++
Sbjct: 77 SSMSYARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLL 136
Query: 66 KACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIKDLI 125
KAC +A + GRQLH +K G ++ LI+MYT V A VF I ++
Sbjct: 137 KACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVV 196
Query: 126 SWSSMIRGFTQLGYEIEALYLFRDMLRQGVY-QPNEFVLGSVFSACSSLLEPEYGRQIHG 184
+++MI G+ + EAL LFR+M QG Y +PNE L SV S+C+ L + G+ IH
Sbjct: 197 CYNAMITGYARRNRPNEALSLFREM--QGKYLKPNEITLLSVLSSCALLGSLDLGKWIHK 254
Query: 185 ICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANE 244
K + V +L DM+AKCG L A + F ++ D +W+A+I A+A+ G A +
Sbjct: 255 YAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEK 314
Query: 245 AISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIV-KVGFNKEVALYNSLL 303
++ +F +M + PD ITFL LL AC+ + +G + S +V K G + Y S++
Sbjct: 315 SMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMV 374
Query: 304 TMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQH 341
+ ++ NL DA + + + + W +L+AC H
Sbjct: 375 DLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAACSSH 412
Score = 175 bits (443), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 112/386 (29%), Positives = 198/386 (51%), Gaps = 20/386 (5%)
Query: 79 QLHAHVIKSGFGGHLVAQNGLISMYTNF-------GQVAHASDVFTMISIKDLISWSSMI 131
Q+ A+ IKS + ++ NF +++A +F +S D++ ++SM
Sbjct: 47 QIQAYAIKSH-----IEDVSFVAKLINFCTESPTESSMSYARHLFEAMSEPDIVIFNSMA 101
Query: 132 RGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGL 191
RG+++ +E LF ++L G+ P+ + S+ AC+ E GRQ+H + K GL
Sbjct: 102 RGYSRFTNPLEVFSLFVEILEDGIL-PDNYTFPSLLKACAVAKALEEGRQLHCLSMKLGL 160
Query: 192 VRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQ 251
NV+ +L +MY +C + SA+ F +I P +V +NA+I +A NEA+S+FR+
Sbjct: 161 DDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFRE 220
Query: 252 MMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSN 311
M L P+ IT LS+L +C +L+ G IH Y K F K V + +L+ M+ KC +
Sbjct: 221 MQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGS 280
Query: 312 LHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLG 371
L DA+S+FE + + + +W+A++ A H +A ++ +F++M +P+ IT LL
Sbjct: 281 LDDAVSIFEKM-RYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLN 339
Query: 372 TCAELASLEVGNQVHCFSV-KSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTE-NPNV 429
C+ +E G + V K G+V + ++D+ ++ G++ A D +P
Sbjct: 340 ACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTP 399
Query: 430 ISWSSLIVGYAMSGLGHEALNLFRKM 455
+ W L+ + H L+L K+
Sbjct: 400 MLWRILLAACS----SHNNLDLAEKV 421
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 123/237 (51%), Gaps = 3/237 (1%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
MY +C + AR VFD + VV + +MI+GY++ + NEA+ ++ +M P+++T
Sbjct: 173 MYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEIT 232
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMIS 120
S++ +C + G + LG+ +H + K F ++ LI M+ G + A +F +
Sbjct: 233 LLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMR 292
Query: 121 IKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGR 180
KD +WS+MI + G +++ +F M + V QP+E + +ACS E GR
Sbjct: 293 YKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENV-QPDEITFLGLLNACSHTGRVEEGR 351
Query: 181 Q-IHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIE-SPDLVSWNAIIAA 235
+ + +KFG+V ++ S+ D+ ++ G L A ++ SP + W ++AA
Sbjct: 352 KYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAA 408
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 280 bits (715), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 151/411 (36%), Positives = 230/411 (55%), Gaps = 4/411 (0%)
Query: 187 AKFGLVR--NVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANE 244
A +G +R N S L + Y + G L +A+ F ++ L +WNA+IA E
Sbjct: 15 AVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEE 74
Query: 245 AISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLT 304
+S+FR+M +G PD T S+ +++ G QIH Y +K G ++ + +SL
Sbjct: 75 GLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAH 134
Query: 305 MYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMI 364
MY + L D V ++ NLV+WN ++ Q+ L+K M S +PN I
Sbjct: 135 MYMRNGKLQDGEIVIRSMPVR-NLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKI 193
Query: 365 TITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDST 424
T +L +C++LA G Q+H ++K G V+V + LI MY+KCG + A + F
Sbjct: 194 TFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSER 253
Query: 425 ENPNVISWSSLIVGYAMSGLGHEALNLFRKM-RNLGVRPNEVTYVGVLSACSHIGLVEEG 483
E+ + + WSS+I Y G G EA+ LF M + NEV ++ +L ACSH GL ++G
Sbjct: 254 EDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKG 313
Query: 484 WNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTLLSSCK 543
L++ M E+ G P +H++C+VDLL RAGCL +AE IR DI WKTLLS+C
Sbjct: 314 LELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACN 373
Query: 544 THGNVDIAERAAENILKLDPSNSAALVLLSSIHASAGNWEDVAKLRKVLDD 594
H N ++A+R + IL++DP++SA VLL+++HASA W DV+++RK + D
Sbjct: 374 IHKNAEMAQRVFKEILQIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRD 424
Score = 187 bits (474), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 111/356 (31%), Positives = 184/356 (51%), Gaps = 3/356 (0%)
Query: 2 YGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTF 61
Y + G + +AR+VFD M R + +W +MI+G Q E + ++ +M GF PD+ T
Sbjct: 35 YVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTL 94
Query: 62 GSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISI 121
GS+ + +G+Q+H + IK G LV + L MY G++ V + +
Sbjct: 95 GSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPV 154
Query: 122 KDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQ 181
++L++W+++I G Q G LYL++ M G +PN+ +V S+CS L G+Q
Sbjct: 155 RNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGC-RPNKITFVTVLSSCSDLAIRGQGQQ 213
Query: 182 IHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGD 241
IH K G V SL MY+KCG L A AF + E D V W+++I+A+ G
Sbjct: 214 IHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQ 273
Query: 242 ANEAISIFRQMM-HIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIV-KVGFNKEVALY 299
+EAI +F M + + + FL+LL AC+ ++G+++ +V K GF + Y
Sbjct: 274 GDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHY 333
Query: 300 NSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQML 355
++ + + L A ++ ++ ++V W +LSAC HK A R+FK++L
Sbjct: 334 TCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEIL 389
Score = 162 bits (409), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 109/374 (29%), Positives = 188/374 (50%), Gaps = 7/374 (1%)
Query: 94 VAQNGLISMYTNFGQVAHASDVFTMISIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQ 153
++ N LI+ Y G + +A VF + + L +W++MI G Q + E L LFR+M
Sbjct: 26 MSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGL 85
Query: 154 GVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPS 213
G + P+E+ LGSVFS + L G+QIHG K+GL ++ SL MY + G L
Sbjct: 86 G-FSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQD 144
Query: 214 AKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTS 273
+ + +LV+WN +I A +G + +++ M G P+ ITF+++L +C+
Sbjct: 145 GEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSD 204
Query: 274 PMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNA 333
QG QIH+ +K+G + VA+ +SL++MY+KC L DA F ++ + V W++
Sbjct: 205 LAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSE-REDEDEVMWSS 263
Query: 334 ILSACLQHKQAGETFRLFKQMLFSEN-KPNMITITNLLGTCAELASLEVGNQVHCFSV-K 391
++SA H Q E LF M N + N + NLL C+ + G ++ V K
Sbjct: 264 MISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEK 323
Query: 392 SGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTE-NPNVISWSSLIVGYAMSGLGHEALN 450
G + ++D+ + G + A+ + S +++ W +L+ + A
Sbjct: 324 YGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQR 383
Query: 451 LFRKMRNLGVRPNE 464
+F+++ L + PN+
Sbjct: 384 VFKEI--LQIDPND 395
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 126/257 (49%), Gaps = 2/257 (0%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
MY + G ++D V +M +RN+V+W ++I G +QNG + +Y M SG P+++T
Sbjct: 135 MYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKIT 194
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMIS 120
F +++ +C G+Q+HA IK G + + LISMY+ G + A+ F+
Sbjct: 195 FVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSERE 254
Query: 121 IKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGR 180
+D + WSSMI + G EA+ LF M Q + NE ++ ACS + G
Sbjct: 255 DEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGL 314
Query: 181 QIHG-ICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIE-SPDLVSWNAIIAAFAD 238
++ + K+G + + D+ + G L A+ + D+V W +++A
Sbjct: 315 ELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNI 374
Query: 239 SGDANEAISIFRQMMHI 255
+A A +F++++ I
Sbjct: 375 HKNAEMAQRVFKEILQI 391
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 278 bits (712), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 154/523 (29%), Positives = 270/523 (51%), Gaps = 4/523 (0%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVM--YIQMLRSGFFPDQ 58
MY CGS+KDA++VFD NV SW +++ G +G+ V+ + +M G +
Sbjct: 155 MYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLNV 214
Query: 59 LTFGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTM 118
+ ++ K+ A + G + HA IK+G + + L+ MY G+V A VF
Sbjct: 215 YSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDE 274
Query: 119 ISIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEY 178
I +D++ W +MI G + EAL LFR M+ + PN +L ++ + +
Sbjct: 275 IVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKL 334
Query: 179 GRQIHG-ICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFA 237
G+++H + V F L D+Y KCG + S + FY + + +SW A+++ +A
Sbjct: 335 GKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYA 394
Query: 238 DSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVA 297
+G ++A+ M G PD +T ++L C A+ QG +IH Y +K F V+
Sbjct: 395 ANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVS 454
Query: 298 LYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFS 357
L SL+ MY+KC + +F+ + + N+ +W A++ +++ +F+ ML S
Sbjct: 455 LVTSLMVMYSKCGVPEYPIRLFDRLEQR-NVKAWTAMIDCYVENCDLRAGIEVFRLMLLS 513
Query: 358 ENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHA 417
+++P+ +T+ +L C++L +L++G ++H +K VS +I MY KCG + A
Sbjct: 514 KHRPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFESIPFVSARIIKMYGKCGDLRSA 573
Query: 418 QRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHI 477
FD+ ++W+++I Y + L +A+N F +M + G PN T+ VLS CS
Sbjct: 574 NFSFDAVAVKGSLTWTAIIEAYGCNELFRDAINCFEQMVSRGFTPNTFTFTAVLSICSQA 633
Query: 478 GLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAE 520
G V+E + +N M + P+ EH+S +++LL R G + EA+
Sbjct: 634 GFVDEAYRFFNLMLRMYNLQPSEEHYSLVIELLNRCGRVEEAQ 676
Score = 207 bits (528), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 158/569 (27%), Positives = 271/569 (47%), Gaps = 44/569 (7%)
Query: 38 QGNEAVVMYI--QMLRSGFFPDQLTFGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVA 95
Q N V + I + + G + TF ++++AC + G+Q+H H+ +G +
Sbjct: 89 QNNLEVALTILDYLEQRGIPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGLESNEFL 148
Query: 96 QNGLISMYTNFGQVAHASDVFTMISIKDLISWSSMIRGFTQLGYEI--EALYLFRDMLRQ 153
+ L+ MYT G V A VF + ++ SW++++RG G + + L F +M
Sbjct: 149 RTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMREL 208
Query: 154 GVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPS 213
GV N + L +VF + + G + H + K GL +VF SL DMY KCG +
Sbjct: 209 GV-DLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGL 267
Query: 214 AKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMM-HIGLIPDSITFLSLLCACT 272
A+ F +I D+V W A+IA A + EA+ +FR M+ + P+S+ ++L
Sbjct: 268 ARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLG 327
Query: 273 SPMALNQGMQIHSYIVK-VGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSW 331
AL G ++H++++K + ++ +++ L+ +Y KC ++ VF SK N +SW
Sbjct: 328 DVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYG-SKQRNAISW 386
Query: 332 NAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVK 391
A++S + + + R M +P+++TI +L CAEL +++ G ++HC+++K
Sbjct: 387 TALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALK 446
Query: 392 SGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNL 451
+ + +VS+ L+ MY+KCG + R+FD E NV +W+++I Y + + +
Sbjct: 447 NLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEV 506
Query: 452 FRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLY-NTMEEEL-GIPPAREHFSCM--- 506
FR M RP+ VT VL+ CS + ++ G L+ + +++E IP M
Sbjct: 507 FRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFESIPFVSARIIKMYGK 566
Query: 507 ----------VDLLARAGCL--------YEAETFIRKT----------GFDPDITTWKTL 538
D +A G L Y R GF P+ T+ +
Sbjct: 567 CGDLRSANFSFDAVAVKGSLTWTAIIEAYGCNELFRDAINCFEQMVSRGFTPNTFTFTAV 626
Query: 539 LSSCKTHGNVDIAERAAENILK---LDPS 564
LS C G VD A R +L+ L PS
Sbjct: 627 LSICSQAGFVDEAYRFFNLMLRMYNLQPS 655
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 88/325 (27%), Positives = 151/325 (46%), Gaps = 5/325 (1%)
Query: 233 IAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGF 292
I FA + A++I + G+ ++ TF +LL AC +L G Q+H +I G
Sbjct: 83 IQIFARQNNLEVALTILDYLEQRGIPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGL 142
Query: 293 NKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACL--QHKQAGETFRL 350
L L+ MYT C ++ DA VF+ S ++N+ SWNA+L + K+ +
Sbjct: 143 ESNEFLRTKLVHMYTACGSVKDAQKVFDE-STSSNVYSWNALLRGTVISGKKRYQDVLST 201
Query: 351 FKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAK 410
F +M N+ +++N+ + A ++L G + H ++K+GL V + L+DMY K
Sbjct: 202 FTEMRELGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFK 261
Query: 411 CGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKM-RNLGVRPNEVTYVG 469
CG V A+RVFD +++ W ++I G A + EAL LFR M + PN V
Sbjct: 262 CGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTT 321
Query: 470 VLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFD 529
+L + ++ G ++ + + S ++DL + G + +
Sbjct: 322 ILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSK-Q 380
Query: 530 PDITTWKTLLSSCKTHGNVDIAERA 554
+ +W L+S +G D A R+
Sbjct: 381 RNAISWTALMSGYAANGRFDQALRS 405
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 277 bits (709), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 145/419 (34%), Positives = 239/419 (57%), Gaps = 7/419 (1%)
Query: 181 QIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSG 240
++H G ++ F L MY+ G + A+ F + + WNA+ A +G
Sbjct: 98 RVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAG 157
Query: 241 DANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMA----LNQGMQIHSYIVKVGFNKEV 296
E + ++ +M IG+ D T+ +L AC + L +G +IH+++ + G++ V
Sbjct: 158 HGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHV 217
Query: 297 ALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQML- 355
+ +L+ MY + + A VF + N+VSW+A+++ ++ +A E R F++M+
Sbjct: 218 YIMTTLVDMYARFGCVDYASYVFGGMPVR-NVVSWSAMIACYAKNGKAFEALRTFREMMR 276
Query: 356 -FSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSV 414
++ PN +T+ ++L CA LA+LE G +H + ++ GL + V + L+ MY +CG +
Sbjct: 277 ETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKL 336
Query: 415 IHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSAC 474
QRVFD + +V+SW+SLI Y + G G +A+ +F +M G P VT+V VL AC
Sbjct: 337 EVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGAC 396
Query: 475 SHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDITT 534
SH GLVEEG L+ TM + GI P EH++CMVDLL RA L EA ++ +P
Sbjct: 397 SHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKV 456
Query: 535 WKTLLSSCKTHGNVDIAERAAENILKLDPSNSAALVLLSSIHASAGNWEDVAKLRKVLD 593
W +LL SC+ HGNV++AERA+ + L+P N+ VLL+ I+A A W++V +++K+L+
Sbjct: 457 WGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLE 515
Score = 196 bits (499), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 107/366 (29%), Positives = 188/366 (51%), Gaps = 6/366 (1%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
MY GS+ AR+VFD R + W ++ + G G E + +Y +M R G D+ T
Sbjct: 121 MYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFT 180
Query: 61 FGSIIKAC----CIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVF 116
+ ++KAC C + G+++HAH+ + G+ H+ L+ MY FG V +AS VF
Sbjct: 181 YTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVF 240
Query: 117 TMISIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGV-YQPNEFVLGSVFSACSSLLE 175
+ +++++SWS+MI + + G EAL FR+M+R+ PN + SV AC+SL
Sbjct: 241 GGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAA 300
Query: 176 PEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAA 235
E G+ IHG + GL + +L MY +CG L + F ++ D+VSWN++I++
Sbjct: 301 LEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISS 360
Query: 236 FADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKV-GFNK 294
+ G +AI IF +M+ G P +TF+S+L AC+ + +G ++ + + G
Sbjct: 361 YGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKP 420
Query: 295 EVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQM 354
++ Y ++ + + + L +A + + + W ++L +C H R +++
Sbjct: 421 QIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRL 480
Query: 355 LFSENK 360
E K
Sbjct: 481 FALEPK 486
Score = 171 bits (433), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 117/424 (27%), Positives = 208/424 (49%), Gaps = 20/424 (4%)
Query: 24 VSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTFGSIIKACCIAGDIYLGRQLHAH 83
+S +I + G+ +A I++L P Q T+ +I C + ++H H
Sbjct: 47 ISNNQLIQSLCKEGKLKQA----IRVLSQESSPSQQTYELLILCCGHRSSLSDALRVHRH 102
Query: 84 VIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIKDLISWSSMIRGFTQLGYEIEA 143
++ +G LI MY++ G V +A VF + + W+++ R T G+ E
Sbjct: 103 ILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEV 162
Query: 144 LYLFRDMLRQGVYQPNEFVLGSVFSAC-------SSLLEPEYGRQIHGICAKFGLVRNVF 196
L L+ M R GV + + F V AC + L++ G++IH + G +V+
Sbjct: 163 LGLYWKMNRIGV-ESDRFTYTYVLKACVASECTVNHLMK---GKEIHAHLTRRGYSSHVY 218
Query: 197 SGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMH-- 254
+L DMYA+ G + A F + ++VSW+A+IA +A +G A EA+ FR+MM
Sbjct: 219 IMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRET 278
Query: 255 IGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHD 314
P+S+T +S+L AC S AL QG IH YI++ G + + + ++L+TMY +C L
Sbjct: 279 KDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEV 338
Query: 315 ALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCA 374
VF+ + + ++VSWN+++S+ H + ++F++ML + P +T ++LG C+
Sbjct: 339 GQRVFDRMH-DRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACS 397
Query: 375 ELASLEVGNQV-HCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQR-VFDSTENPNVISW 432
+E G ++ G+ + ++D+ + + A + V D P W
Sbjct: 398 HEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVW 457
Query: 433 SSLI 436
SL+
Sbjct: 458 GSLL 461
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 116/254 (45%), Gaps = 16/254 (6%)
Query: 329 VSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCF 388
+S N ++ + + + + R+ Q E+ P+ T L+ C +SL +VH
Sbjct: 47 ISNNQLIQSLCKEGKLKQAIRVLSQ----ESSPSQQTYELLILCCGHRSSLSDALRVHRH 102
Query: 389 SVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEA 448
+ +G D ++ LI MY+ GSV +A++VFD T + W++L ++G G E
Sbjct: 103 ILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEV 162
Query: 449 LNLFRKMRNLGVRPNEVTYVGVLSAC----SHIGLVEEGWNLYNTMEEELGIPPAREHFS 504
L L+ KM +GV + TY VL AC + + +G ++ + G +
Sbjct: 163 LGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRR-GYSSHVYIMT 221
Query: 505 CMVDLLARAGCL-YEAETFIRKTGFDP--DITTWKTLLSSCKTHGNVDIAERAAENILKL 561
+VD+ AR GC+ Y + F G P ++ +W +++ +G A R +++
Sbjct: 222 TLVDMYARFGCVDYASYVF----GGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRE 277
Query: 562 DPSNSAALVLLSSI 575
+S V + S+
Sbjct: 278 TKDSSPNSVTMVSV 291
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 276 bits (707), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 164/499 (32%), Positives = 263/499 (52%), Gaps = 11/499 (2%)
Query: 92 HLVAQNGLISMYTNFGQVAHASDVFTMISIKDLISWSSMIRGFTQLGYEIEALYLFRDML 151
H+ +I+ YT ++ A ++F + ++D++SW+SMI G + G A+ LF +M
Sbjct: 65 HVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEMP 124
Query: 152 RQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFL 211
+ V V G S E + + V++ + S+ Y + G +
Sbjct: 125 ERSVVSWTAMVNGCFRSGKVDQAERLFYQMP---------VKDTAAWNSMVHGYLQFGKV 175
Query: 212 PSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCAC 271
A F Q+ +++SW +I + + EA+ +F+ M+ + S F ++ AC
Sbjct: 176 DDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITAC 235
Query: 272 TSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSW 331
+ A + G+Q+H I+K+GF E + SL+T Y C + D+ VF+ + + W
Sbjct: 236 ANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDE-KVHEQVAVW 294
Query: 332 NAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVK 391
A+LS +K+ + +F ML + PN T + L +C+ L +L+ G ++H +VK
Sbjct: 295 TALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVK 354
Query: 392 SGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNL 451
GL D V N L+ MY+ G+V A VF +++SW+S+IVG A G G A +
Sbjct: 355 LGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVI 414
Query: 452 FRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELG-IPPAREHFSCMVDLL 510
F +M L P+E+T+ G+LSACSH G +E+G L+ M + I +H++CMVD+L
Sbjct: 415 FGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDIL 474
Query: 511 ARAGCLYEAETFIRKTGFDPDITTWKTLLSSCKTHGNVDIAERAAENILKLDPSNSAALV 570
R G L EAE I + P+ W LLS+C+ H +VD E+AA I LD +SAA V
Sbjct: 475 GRCGKLKEAEELIERMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKSSAAYV 534
Query: 571 LLSSIHASAGNWEDVAKLR 589
LLS+I+ASAG W +V+KLR
Sbjct: 535 LLSNIYASAGRWSNVSKLR 553
Score = 203 bits (517), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 131/447 (29%), Positives = 233/447 (52%), Gaps = 21/447 (4%)
Query: 2 YGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQ--L 59
Y + + DA +FD M +R+VVSW SMISG + G N AV ++ +M P++ +
Sbjct: 76 YTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEM------PERSVV 129
Query: 60 TFGSIIKACCIAGDIYLGRQLHAHV-IKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTM 118
++ +++ C +G + +L + +K A N ++ Y FG+V A +F
Sbjct: 130 SWTAMVNGCFRSGKVDQAERLFYQMPVKD-----TAAWNSMVHGYLQFGKVDDALKLFKQ 184
Query: 119 ISIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEY 178
+ K++ISW++MI G Q EAL LF++MLR + + V +AC++
Sbjct: 185 MPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSR-PFTCVITACANAPAFHM 243
Query: 179 GRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFAD 238
G Q+HG+ K G + + SL YA C + ++ F + + W A+++ ++
Sbjct: 244 GIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSL 303
Query: 239 SGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVAL 298
+ +A+SIF M+ ++P+ TF S L +C++ L+ G ++H VK+G + +
Sbjct: 304 NKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFV 363
Query: 299 YNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSE 358
NSL+ MY+ N++DA+SVF I K + +VSWN+I+ C QH + F +F QM+
Sbjct: 364 GNSLVVMYSDSGNVNDAVSVFIKIFKKS-IVSWNSIIVGCAQHGRGKWAFVIFGQMIRLN 422
Query: 359 NKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLV-LDVSVSN--GLIDMYAKCGSVI 415
+P+ IT T LL C+ LE G ++ + + SG+ +D + + ++D+ +CG +
Sbjct: 423 KEPDEITFTGLLSACSHCGFLEKGRKLF-YYMSSGINHIDRKIQHYTCMVDILGRCGKLK 481
Query: 416 HAQRVFDS-TENPNVISWSSLIVGYAM 441
A+ + + PN + W +L+ M
Sbjct: 482 EAEELIERMVVKPNEMVWLALLSACRM 508
Score = 184 bits (467), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 109/343 (31%), Positives = 176/343 (51%), Gaps = 5/343 (1%)
Query: 2 YGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTF 61
Y + G + DA ++F M +NV+SWT+MI G QN + EA+ ++ MLR F
Sbjct: 169 YLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPF 228
Query: 62 GSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISI 121
+I AC A ++G Q+H +IK GF LI+ Y N ++ + VF
Sbjct: 229 TCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVH 288
Query: 122 KDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQ 181
+ + W++++ G++ +AL +F MLR + PN+ S ++CS+L ++G++
Sbjct: 289 EQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSIL-PNQSTFASGLNSCSALGTLDWGKE 347
Query: 182 IHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGD 241
+HG+ K GL + F G SL MY+ G + A + F +I +VSWN+II A G
Sbjct: 348 MHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGR 407
Query: 242 ANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFN---KEVAL 298
A IF QM+ + PD ITF LL AC+ L +G ++ Y + G N +++
Sbjct: 408 GKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLF-YYMSSGINHIDRKIQH 466
Query: 299 YNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQH 341
Y ++ + +C L +A + E + N + W A+LSAC H
Sbjct: 467 YTCMVDILGRCGKLKEAEELIERMVVKPNEMVWLALLSACRMH 509
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 50/80 (62%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
MY G++ DA VF + +++VSW S+I G +Q+G+G A V++ QM+R PD++T
Sbjct: 370 MYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEIT 429
Query: 61 FGSIIKACCIAGDIYLGRQL 80
F ++ AC G + GR+L
Sbjct: 430 FTGLLSACSHCGFLEKGRKL 449
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 275 bits (703), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 151/566 (26%), Positives = 294/566 (51%), Gaps = 46/566 (8%)
Query: 79 QLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIKDLISWSSMIRGFTQLG 138
QLHA ++ + LIS YT + A VF I++++ S+++++ +T
Sbjct: 43 QLHARIVVFSIKPDNFLASKLISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYTSRE 102
Query: 139 YEIEALYLFRDMLRQGVY-----QPNEFVLGSVFSA---CSSLLEPEYGRQIHGICAKFG 190
+A LF + Y +P+ + V A C RQ+HG + G
Sbjct: 103 MYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIRGG 162
Query: 191 LVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFR 250
+VF G + Y KC + SA+ F ++ D+VSWN++I+ ++ SG + +++
Sbjct: 163 FDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYK 222
Query: 251 QMMHIG-LIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKC 309
M+ P+ +T +S+ AC L G+++H +++ +++L N+++ Y KC
Sbjct: 223 AMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKC 282
Query: 310 SNLHDALSVFEAISKNAN------------------------------LVSWNAILSACL 339
+L A ++F+ +S+ + L +WNA++S +
Sbjct: 283 GSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLM 342
Query: 340 QHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVS 399
Q+ E F++M+ ++PN +T+++LL + ++L+ G ++H F++++G ++
Sbjct: 343 QNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIY 402
Query: 400 VSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLG 459
V+ +ID YAK G ++ AQRVFD+ ++ ++I+W+++I YA+ G A +LF +M+ LG
Sbjct: 403 VTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLG 462
Query: 460 VRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEA 519
+P++VT VLSA +H G + +++++M + I P EH++CMV +L+RAG L +A
Sbjct: 463 TKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLSDA 522
Query: 520 ETFIRKTGFDPDITTWKTLLSSCKTHGNVDIAERAAENILKLDPSNSAALVLLSSIHASA 579
FI K DP W LL+ G+++IA A + + +++P N+ ++++++ A
Sbjct: 523 MEFISKMPIDPIAKVWGALLNGASVLGDLEIARFACDRLFEMEPENTGNYTIMANLYTQA 582
Query: 580 GNWEDVAKLRKVLDDGYDPAQRLGIR 605
G WE+ +R + +R+G++
Sbjct: 583 GRWEEAEMVRNKM-------KRIGLK 601
Score = 169 bits (428), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 140/544 (25%), Positives = 247/544 (45%), Gaps = 66/544 (12%)
Query: 2 YGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFF------ 55
Y + + A VFD + +RN S+ +++ Y+ +A +++ + S +
Sbjct: 67 YTRQDRFRQALHVFDEITVRNAFSYNALLIAYTSREMYFDAFSLFLSWIGSSCYSSDAAR 126
Query: 56 PDQLTFGSIIKACCIAGDIYLG---RQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHA 112
PD ++ ++KA D +LG RQ+H VI+ GF + NG+I+ YT + A
Sbjct: 127 PDSISISCVLKALSGCDDFWLGSLARQVHGFVIRGGFDSDVFVGNGMITYYTKCDNIESA 186
Query: 113 SDVFTMISIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSS 172
VF +S +D++SW+SMI G++Q G + +++ ML ++PN + SVF AC
Sbjct: 187 RKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQ 246
Query: 173 LLEPEYGRQIHGICAKFGLVRNVFSGCSLCD----MYAKCGFLPSAK------------- 215
+ +G ++H K + ++ SLC+ YAKCG L A+
Sbjct: 247 SSDLIFGLEVH----KKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVT 302
Query: 216 ------------------TAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGL 257
F ++ES L +WNA+I+ + E I+ FR+M+ G
Sbjct: 303 YGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFREMIRCGS 362
Query: 258 IPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALS 317
P+++T SLL + T L G +IH++ ++ G + + + S++ Y K L A
Sbjct: 363 RPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQR 422
Query: 318 VFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELA 377
VF+ K+ +L++W AI++A H + LF QM KP+ +T+T +L A
Sbjct: 423 VFDNC-KDRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSG 481
Query: 378 SLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVI-HAQRVFDSTE-------NPNV 429
++ H F ++ + G ++ YA SV+ A ++ D+ E +P
Sbjct: 482 DSDMAQ--HIF---DSMLTKYDIEPG-VEHYACMVSVLSRAGKLSDAMEFISKMPIDPIA 535
Query: 430 ISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRP-NEVTYVGVLSACSHIGLVEEGWNLYN 488
W +L+ G ++ LG + F R + P N Y + + + G EE + N
Sbjct: 536 KVWGALLNGASV--LGDLEIARFACDRLFEMEPENTGNYTIMANLYTQAGRWEEAEMVRN 593
Query: 489 TMEE 492
M+
Sbjct: 594 KMKR 597
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 103/395 (26%), Positives = 188/395 (47%), Gaps = 19/395 (4%)
Query: 176 PEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAA 235
P + Q+H F + + F L Y + A F +I + S+NA++ A
Sbjct: 38 PLHVLQLHARIVVFSIKPDNFLASKLISFYTRQDRFRQALHVFDEITVRNAFSYNALLIA 97
Query: 236 FADSGDANEAISIFRQMM------HIGLIPDSITF---LSLLCACTSPMALNQGMQIHSY 286
+ +A S+F + PDSI+ L L C + Q+H +
Sbjct: 98 YTSREMYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGF 157
Query: 287 IVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGE 346
+++ GF+ +V + N ++T YTKC N+ A VF+ +S+ ++VSWN+++S Q +
Sbjct: 158 VIRGGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSER-DVVSWNSMISGYSQSGSFED 216
Query: 347 TFRLFKQMLF-SENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLI 405
+++K ML S+ KPN +T+ ++ C + + L G +VH +++ + +D+S+ N +I
Sbjct: 217 CKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVI 276
Query: 406 DMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEV 465
YAKCGS+ +A+ +FD + +++ ++I GY GL EA+ LF +M ++G+
Sbjct: 277 GFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNA 336
Query: 466 TYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCL---YEAETF 522
G++ H EE N + M G P S ++ L + L E F
Sbjct: 337 MISGLMQNNHH----EEVINSFREM-IRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAF 391
Query: 523 IRKTGFDPDITTWKTLLSSCKTHGNVDIAERAAEN 557
+ G D +I +++ + G + A+R +N
Sbjct: 392 AIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDN 426
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 273 bits (698), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 170/595 (28%), Positives = 301/595 (50%), Gaps = 68/595 (11%)
Query: 4 KCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTFGS 63
+ G + +AR++FD+ +++ SW SM++GY N +A ++ +M PD+
Sbjct: 29 RIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEM------PDR----- 77
Query: 64 IIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIKD 123
++++ NGL+S Y G++ A VF ++ ++
Sbjct: 78 ----------------------------NIISWNGLVSGYMKNGEIDEARKVFDLMPERN 109
Query: 124 LISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIH 183
++SW+++++G+ G A LF M + ++G + + GR I
Sbjct: 110 VVSWTALVKGYVHNGKVDVAESLFWKMPEKNKVSWTVMLIGFL----------QDGR-ID 158
Query: 184 GICAKFGLV--RNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGD 241
C + ++ ++ + S+ K G + A+ F ++ +++W ++ + +
Sbjct: 159 DACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNR 218
Query: 242 ANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNS 301
++A IF M +++ S+L N ++ + +V K V N+
Sbjct: 219 VDDARKIFDVMPE----KTEVSWTSMLMGYVQ----NGRIEDAEELFEVMPVKPVIACNA 270
Query: 302 LLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAG---ETFRLFKQMLFSE 358
+++ + + A VF+++ K N SW ++ H++ G E LF M
Sbjct: 271 MISGLGQKGEIAKARRVFDSM-KERNDASWQTVIKI---HERNGFELEALDLFILMQKQG 326
Query: 359 NKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQ 418
+P T+ ++L CA LASL G QVH V+ +DV V++ L+ MY KCG ++ ++
Sbjct: 327 VRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSK 386
Query: 419 RVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLG-VRPNEVTYVGVLSACSHI 477
+FD + ++I W+S+I GYA GLG EAL +F +M G +PNEVT+V LSACS+
Sbjct: 387 LIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYA 446
Query: 478 GLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKT 537
G+VEEG +Y +ME G+ P H++CMVD+L RAG EA I +PD W +
Sbjct: 447 GMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGS 506
Query: 538 LLSSCKTHGNVDIAERAAENILKLDPSNSAALVLLSSIHASAGNWEDVAKLRKVL 592
LL +C+TH +D+AE A+ +++++P NS +LLS+++AS G W DVA+LRK++
Sbjct: 507 LLGACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKLM 561
Score = 142 bits (357), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 140/606 (23%), Positives = 254/606 (41%), Gaps = 121/606 (19%)
Query: 2 YGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEA---------------VVMY 46
Y K G + +AR+VFD M RNVVSWT+++ GY NG+ + A VM
Sbjct: 89 YMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKVSWTVML 148
Query: 47 IQMLRSG----------FFPDQ--LTFGSIIKACCIAGDIYLGRQLHAHV---------- 84
I L+ G PD+ + S+I C G + R++ +
Sbjct: 149 IGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTT 208
Query: 85 IKSGFGGH-----------------LVAQNGLISMYTNFGQVAHASDVFTMISIKDLISW 127
+ +G+G + V+ ++ Y G++ A ++F ++ +K +I+
Sbjct: 209 MVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVMPVKPVIAC 268
Query: 128 SSMIRGFTQLGYEIEALYLFRDMLRQG---------VYQPNEF----------------- 161
++MI G Q G +A +F M + +++ N F
Sbjct: 269 NAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVR 328
Query: 162 ----VLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTA 217
L S+ S C+SL +G+Q+H + +V+ L MY KCG L +K
Sbjct: 329 PTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLI 388
Query: 218 FYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLI-PDSITFLSLLCACTSPMA 276
F + S D++ WN+II+ +A G EA+ +F +M G P+ +TF++ L AC+
Sbjct: 389 FDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGM 448
Query: 277 LNQGMQIHSYIVKV-GFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAIL 335
+ +G++I+ + V G A Y ++ M + ++A+ + ++++ + W ++L
Sbjct: 449 VEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLL 508
Query: 336 SACLQHKQAGETFRLFKQM--LFSENKPNMITITNLL---GTCAELASL----------- 379
AC H Q K++ + EN I ++N+ G A++A L
Sbjct: 509 GACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKLMKTRLVRK 568
Query: 380 -------EVGNQVHCFSV--------KSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDST 424
EV N+VH F+ + ++ + +GL+ +A D
Sbjct: 569 SPGCSWTEVENKVHAFTRGGINSHPEQESILKILDELDGLLREAGYNPDCSYALHDVDEE 628
Query: 425 ENPNVISWSS--LIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEE 482
E N + + S L V YA+ L E + + R M+NL V + T + ++S ++
Sbjct: 629 EKVNSLKYHSERLAVAYALLKLS-EGIPI-RVMKNLRVCSDCHTAIKIISKVKEREIILR 686
Query: 483 GWNLYN 488
N ++
Sbjct: 687 DANRFH 692
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 101/458 (22%), Positives = 190/458 (41%), Gaps = 75/458 (16%)
Query: 97 NGLISMYTNFGQVAHASDVFTMISIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVY 156
N I+ + G++ A +F K + SW+SM+ G+ +A LF +M + +
Sbjct: 21 NVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRNII 80
Query: 157 QPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKT 216
N V G + + E + R++ + + RNV S +L Y G + A++
Sbjct: 81 SWNGLVSGYMKNG-----EIDEARKVFDLMPE----RNVVSWTALVKGYVHNGKVDVAES 131
Query: 217 AFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIP--DSITFLSLLCACTSP 274
F+++ + VSW ++ F G ++A ++ +IP D+I S++
Sbjct: 132 LFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLYE------MIPDKDNIARTSMIHGLCKE 185
Query: 275 MALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAI 334
+++ +I + + + V + +++T Y + + + DA +F+ + + VSW ++
Sbjct: 186 GRVDEAREIFDEMSE----RSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTE-VSWTSM 240
Query: 335 LSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGL 394
L +Q+ + + LF+ M KP
Sbjct: 241 LMGYVQNGRIEDAEELFEVMPV---KP--------------------------------- 264
Query: 395 VLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRK 454
V N +I + G + A+RVFDS + N SW ++I + +G EAL+LF
Sbjct: 265 ---VIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFIL 321
Query: 455 MRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAG 514
M+ GVRP T + +LS C+ + + G ++ + R F V + +
Sbjct: 322 MQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQL--------VRCQFDVDVYVASVLM 373
Query: 515 CLYE--AETFIRKTGFD----PDITTWKTLLSSCKTHG 546
+Y E K FD DI W +++S +HG
Sbjct: 374 TMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHG 411
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 80/144 (55%), Gaps = 8/144 (5%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFF-PDQL 59
MY KCG + ++ +FD ++++ W S+ISGY+ +G G EA+ ++ +M SG P+++
Sbjct: 375 MYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEV 434
Query: 60 TFGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQN--GLISMYTNFGQVAHASDVFT 117
TF + + AC AG + G +++ ++S FG + + ++ M G+ A ++
Sbjct: 435 TFVATLSACSYAGMVEEGLKIYES-MESVFGVKPITAHYACMVDMLGRAGRFNEAMEMID 493
Query: 118 MISIK-DLISWSSMI---RGFTQL 137
++++ D W S++ R +QL
Sbjct: 494 SMTVEPDAAVWGSLLGACRTHSQL 517
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 273 bits (698), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 150/485 (30%), Positives = 255/485 (52%), Gaps = 39/485 (8%)
Query: 148 RDMLRQGVY------QPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFSGCSL 201
+ +LR+ V +P ++ CS E G+++H G V + L
Sbjct: 67 QKLLREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRL 126
Query: 202 CDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQM--------- 252
MYAKCG L A+ F ++ + DL SWN ++ +A+ G EA +F +M
Sbjct: 127 LRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWT 186
Query: 253 -MHIGLI----------------------PDSITFLSLLCACTSPMALNQGMQIHSYIVK 289
M G + P+ T + A + + +G +IH +IV+
Sbjct: 187 AMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVR 246
Query: 290 VGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFR 349
G + + L++SL+ MY KC + +A ++F+ I + ++VSW +++ + + E F
Sbjct: 247 AGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEK-DVVSWTSMIDRYFKSSRWREGFS 305
Query: 350 LFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYA 409
LF +++ S +PN T +L CA+L + E+G QVH + + G S+ L+DMY
Sbjct: 306 LFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYT 365
Query: 410 KCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVG 469
KCG++ A+ V D P+++SW+SLI G A +G EAL F + G +P+ VT+V
Sbjct: 366 KCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVN 425
Query: 470 VLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFD 529
VLSAC+H GLVE+G + ++ E+ + +H++C+VDLLAR+G + ++ I +
Sbjct: 426 VLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMK 485
Query: 530 PDITTWKTLLSSCKTHGNVDIAERAAENILKLDPSNSAALVLLSSIHASAGNWEDVAKLR 589
P W ++L C T+GN+D+AE AA+ + K++P N V +++I+A+AG WE+ K+R
Sbjct: 486 PSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMR 545
Query: 590 KVLDD 594
K + +
Sbjct: 546 KRMQE 550
Score = 188 bits (477), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 136/492 (27%), Positives = 222/492 (45%), Gaps = 45/492 (9%)
Query: 39 GNEAVVMYIQMLRSGFFPDQLTFGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNG 98
G + + +Q+L P T+ ++I+ C + G+++H H+ SGF +V N
Sbjct: 66 GQKLLREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNR 125
Query: 99 LISMYTNFGQVAHASDVFTMISIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVY-- 156
L+ MY G + A VF + +DL SW+ M+ G+ ++G EA LF +M + Y
Sbjct: 126 LLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSW 185
Query: 157 -----------------------------QPNEFVLGSVFSACSSLLEPEYGRQIHGICA 187
+PN F + +A +++ G++IHG
Sbjct: 186 TAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIV 245
Query: 188 KFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAIS 247
+ GL + SL DMY KCG + A+ F +I D+VSW ++I + S E S
Sbjct: 246 RAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFS 305
Query: 248 IFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYT 307
+F +++ P+ TF +L AC G Q+H Y+ +VGF+ +SL+ MYT
Sbjct: 306 LFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYT 365
Query: 308 KCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITIT 367
KC N+ A V + K +LVSW +++ C Q+ Q E + F +L S KP+ +T
Sbjct: 366 KCGNIESAKHVVDGCPK-PDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFV 424
Query: 368 NLLGTCAELASLEVGNQ-VHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTE- 425
N+L C +E G + + + K L L+D+ A+ G + V
Sbjct: 425 NVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPM 484
Query: 426 NPNVISWSSLIVGYAMSG---LGHEALN-LFRKMRNLGVRP-NEVTYVGVLSACSHIGLV 480
P+ W+S++ G + G L EA LF+ + P N VTYV + + + G
Sbjct: 485 KPSKFLWASVLGGCSTYGNIDLAEEAAQELFK------IEPENPVTYVTMANIYAAAGKW 538
Query: 481 EEGWNLYNTMEE 492
EE + M+E
Sbjct: 539 EEEGKMRKRMQE 550
Score = 187 bits (475), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 110/377 (29%), Positives = 185/377 (49%), Gaps = 15/377 (3%)
Query: 2 YGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLR-SGFFPDQLT 60
Y + G +++AR++FD M ++ SWT+M++GY + Q EA+V+Y M R P+ T
Sbjct: 161 YAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFT 220
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMIS 120
+ A I G+++H H++++G V + L+ MY G + A ++F I
Sbjct: 221 VSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIV 280
Query: 121 IKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGR 180
KD++SW+SMI + + E LF +++ +PNE+ V +AC+ L E G+
Sbjct: 281 EKDVVSWTSMIDRYFKSSRWREGFSLFSELV-GSCERPNEYTFAGVLNACADLTTEELGK 339
Query: 181 QIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSG 240
Q+HG + G F+ SL DMY KCG + SAK PDLVSW ++I A +G
Sbjct: 340 QVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNG 399
Query: 241 DANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQ-IHSYIVKVGFNKEVALY 299
+EA+ F ++ G PD +TF+++L ACT + +G++ +S K + Y
Sbjct: 400 QPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHY 459
Query: 300 NSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSAC-------LQHKQAGETFRLFK 352
L+ + + SV + + W ++L C L + A E F+
Sbjct: 460 TCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFK--- 516
Query: 353 QMLFSENKPNMITITNL 369
+ EN +T+ N+
Sbjct: 517 --IEPENPVTYVTMANI 531
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 134/269 (49%), Gaps = 4/269 (1%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
MYGKCG + +AR +FD + ++VVSWTSMI Y ++ + E ++ +++ S P++ T
Sbjct: 262 MYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYT 321
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMIS 120
F ++ AC LG+Q+H ++ + GF + A + L+ MYT G + A V
Sbjct: 322 FAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCP 381
Query: 121 IKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGR 180
DL+SW+S+I G Q G EAL F +L+ G +P+ +V SAC+ E G
Sbjct: 382 KPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGT-KPDHVTFVNVLSACTHAGLVEKGL 440
Query: 181 Q-IHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIE-SPDLVSWNAIIAAFAD 238
+ + I K L L D+ A+ G K+ ++ P W +++ +
Sbjct: 441 EFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCST 500
Query: 239 SGDANEAISIFRQMMHIGLIPDSITFLSL 267
G+ + A +++ I + +T++++
Sbjct: 501 YGNIDLAEEAAQELFKIE-PENPVTYVTM 528
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 273 bits (697), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 144/430 (33%), Positives = 240/430 (55%), Gaps = 3/430 (0%)
Query: 165 SVFSACSSLLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESP 224
++ +AC G+++H K + + L Y KC L A+ ++
Sbjct: 57 ALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEK 116
Query: 225 DLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIH 284
++VSW A+I+ ++ +G ++EA+++F +MM P+ TF ++L +C L G QIH
Sbjct: 117 NVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIH 176
Query: 285 SYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQA 344
IVK ++ + + +SLL MY K + +A +FE + + ++VS AI++ Q
Sbjct: 177 GLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPER-DVVSCTAIIAGYAQLGLD 235
Query: 345 GETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGL 404
E +F ++ PN +T +LL + LA L+ G Q HC ++ L + N L
Sbjct: 236 EEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSL 295
Query: 405 IDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLG-VRPN 463
IDMY+KCG++ +A+R+FD+ ISW++++VGY+ GLG E L LFR MR+ V+P+
Sbjct: 296 IDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPD 355
Query: 464 EVTYVGVLSACSHIGLVEEGWNLYNTM-EEELGIPPAREHFSCMVDLLARAGCLYEAETF 522
VT + VLS CSH + + G N+++ M E G P EH+ C+VD+L RAG + EA F
Sbjct: 356 AVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEF 415
Query: 523 IRKTGFDPDITTWKTLLSSCKTHGNVDIAERAAENILKLDPSNSAALVLLSSIHASAGNW 582
I++ P +LL +C+ H +VDI E +++++P N+ V+LS+++ASAG W
Sbjct: 416 IKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYASAGRW 475
Query: 583 EDVAKLRKVL 592
DV +R ++
Sbjct: 476 ADVNNVRAMM 485
Score = 200 bits (509), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 113/383 (29%), Positives = 197/383 (51%), Gaps = 6/383 (1%)
Query: 2 YGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTF 61
YGKC ++DAR+V D M +NVVSWT+MIS YSQ G +EA+ ++ +M+RS P++ TF
Sbjct: 97 YGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTF 156
Query: 62 GSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISI 121
+++ +C A + LG+Q+H ++K + H+ + L+ MY GQ+ A ++F +
Sbjct: 157 ATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPE 216
Query: 122 KDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQ 181
+D++S +++I G+ QLG + EAL +F + +G+ PN S+ +A S L ++G+Q
Sbjct: 217 RDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGM-SPNYVTYASLLTALSGLALLDHGKQ 275
Query: 182 IHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGD 241
H + L SL DMY+KCG L A+ F + +SWNA++ ++ G
Sbjct: 276 AHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGL 335
Query: 242 ANEAISIFRQMMHIGLI-PDSITFLSLLCACTSPMALNQGMQIHSYIV--KVGFNKEVAL 298
E + +FR M + PD++T L++L C+ + G+ I +V + G
Sbjct: 336 GREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEH 395
Query: 299 YNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQA--GETFRLFKQMLF 356
Y ++ M + + +A + + ++L AC H GE+ +
Sbjct: 396 YGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIE 455
Query: 357 SENKPNMITITNLLGTCAELASL 379
EN N + ++NL + A +
Sbjct: 456 PENAGNYVILSNLYASAGRWADV 478
Score = 173 bits (439), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 108/347 (31%), Positives = 182/347 (52%), Gaps = 8/347 (2%)
Query: 30 ISGYSQNGQGNEAVV-MYIQMLRSGFFPDQLTFGSIIKACCIAGDIYLGRQLHAHVIKSG 88
IS NG+ EA++ M + GF + +++ AC + G+++HAH+IK+
Sbjct: 27 ISQLCSNGRLQEALLEMAMLGPEMGFH----GYDALLNACLDKRALRDGQRVHAHMIKTR 82
Query: 89 FGGHLVAQNGLISMYTNFGQVAHASDVFTMISIKDLISWSSMIRGFTQLGYEIEALYLFR 148
+ + L+ Y + A V + K+++SW++MI ++Q G+ EAL +F
Sbjct: 83 YLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFA 142
Query: 149 DMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKC 208
+M+R +PNEF +V ++C G+QIHG+ K+ ++F G SL DMYAK
Sbjct: 143 EMMRSDG-KPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKA 201
Query: 209 GFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLL 268
G + A+ F + D+VS AIIA +A G EA+ +F ++ G+ P+ +T+ SLL
Sbjct: 202 GQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLL 261
Query: 269 CACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANL 328
A + L+ G Q H ++++ L NSL+ MY+KC NL A +F+ + +
Sbjct: 262 TALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPER-TA 320
Query: 329 VSWNAILSACLQHKQAGETFRLFKQMLFSEN-KPNMITITNLLGTCA 374
+SWNA+L +H E LF+ M + KP+ +T+ +L C+
Sbjct: 321 ISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCS 367
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 140/290 (48%), Gaps = 32/290 (11%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
MY K G +K+AR++F+ + R+VVS T++I+GY+Q G EA+ M+ ++ G P+ +T
Sbjct: 197 MYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVT 256
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMIS 120
+ S++ A + G+Q H HV++ + V QN LI MY+ G +++A +F +
Sbjct: 257 YASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMP 316
Query: 121 IKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGR 180
+ ISW++M+ G+++ G E L LFR M + +P+ L +V S CS
Sbjct: 317 ERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCS--------- 367
Query: 181 QIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSG 240
HG GL N+F G + K P + I+ +G
Sbjct: 368 --HGRMEDTGL--NIFDGMVAGEYGTK----------------PGTEHYGCIVDMLGRAG 407
Query: 241 DANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKV 290
+EA ++M P + SLL AC ++++ G + ++++
Sbjct: 408 RIDEAFEFIKRMPS---KPTAGVLGSLLGACRVHLSVDIGESVGRRLIEI 454
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 272 bits (695), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 145/435 (33%), Positives = 244/435 (56%), Gaps = 33/435 (7%)
Query: 190 GLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIF 249
GL ++ F + D K + A F Q+ +P++ +N+II A+ + + I I+
Sbjct: 37 GLSQSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIY 96
Query: 250 RQMMHIGL-IPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTK 308
+Q++ +PD TF + +C S + G Q+H ++ K G V N+L+ MY K
Sbjct: 97 KQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMK 156
Query: 309 CSNLHDALSVFEAISKNANLVSWNAILSACL---QHKQAGETFRL--------------- 350
+L DA VF+ + + +++SWN++LS Q K+A F L
Sbjct: 157 FDDLVDAHKVFDEMYER-DVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISG 215
Query: 351 -------------FKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLD 397
F++M + +P+ I++ ++L +CA+L SLE+G +H ++ + G +
Sbjct: 216 YTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQ 275
Query: 398 VSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRN 457
V N LI+MY+KCG + A ++F E +VISWS++I GYA G H A+ F +M+
Sbjct: 276 TGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQR 335
Query: 458 LGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLY 517
V+PN +T++G+LSACSH+G+ +EG ++ M ++ I P EH+ C++D+LARAG L
Sbjct: 336 AKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLE 395
Query: 518 EAETFIRKTGFDPDITTWKTLLSSCKTHGNVDIAERAAENILKLDPSNSAALVLLSSIHA 577
A + PD W +LLSSC+T GN+D+A A +++++L+P + VLL++I+A
Sbjct: 396 RAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLVELEPEDMGNYVLLANIYA 455
Query: 578 SAGNWEDVAKLRKVL 592
G WEDV++LRK++
Sbjct: 456 DLGKWEDVSRLRKMI 470
Score = 181 bits (460), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 107/368 (29%), Positives = 183/368 (49%), Gaps = 34/368 (9%)
Query: 4 KCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGF-FPDQLTFG 62
K M A ++F+ + NV + S+I Y+ N + + +Y Q+LR F PD+ TF
Sbjct: 54 KIEDMDYATRLFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFP 113
Query: 63 SIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNF---------------- 106
+ K+C G YLG+Q+H H+ K G H+V +N LI MY F
Sbjct: 114 FMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYER 173
Query: 107 ---------------GQVAHASDVFTMISIKDLISWSSMIRGFTQLGYEIEALYLFRDML 151
GQ+ A +F ++ K ++SW++MI G+T +G +EA+ FR+M
Sbjct: 174 DVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQ 233
Query: 152 RQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFL 211
G+ +P+E L SV +C+ L E G+ IH + G ++ +L +MY+KCG +
Sbjct: 234 LAGI-EPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVI 292
Query: 212 PSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCAC 271
A F Q+E D++SW+ +I+ +A G+A+ AI F +M + P+ ITFL LL AC
Sbjct: 293 SQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSAC 352
Query: 272 TSPMALNQGMQIHSYIVK-VGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVS 330
+ +G++ + + ++ Y L+ + + L A+ + + + +
Sbjct: 353 SHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKI 412
Query: 331 WNAILSAC 338
W ++LS+C
Sbjct: 413 WGSLLSSC 420
Score = 142 bits (358), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 95/394 (24%), Positives = 183/394 (46%), Gaps = 38/394 (9%)
Query: 78 RQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIKDLISWSSMIRGFTQL 137
++++A +I G ++ + +A+ +F +S ++ ++S+IR +T
Sbjct: 27 KKINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPNVFLYNSIIRAYTHN 86
Query: 138 GYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFS 197
+ + +++ +LR+ P+ F +F +C+SL G+Q+HG KFG +V +
Sbjct: 87 SLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVT 146
Query: 198 GCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDAN-------------- 243
+L DMY K L A F ++ D++SWN++++ +A G
Sbjct: 147 ENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTI 206
Query: 244 -----------------EAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSY 286
EA+ FR+M G+ PD I+ +S+L +C +L G IH Y
Sbjct: 207 VSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLY 266
Query: 287 IVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGE 346
+ GF K+ + N+L+ MY+KC + A+ +F + + +++SW+ ++S H A
Sbjct: 267 AERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQM-EGKDVISWSTMISGYAYHGNAHG 325
Query: 347 TFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFS-VKSGLVLDVSVSNG-- 403
F +M ++ KPN IT LL C+ + + G + F ++ ++ + +
Sbjct: 326 AIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEG--LRYFDMMRQDYQIEPKIEHYGC 383
Query: 404 LIDMYAKCGSVIHAQRVFDSTE-NPNVISWSSLI 436
LID+ A+ G + A + + P+ W SL+
Sbjct: 384 LIDVLARAGKLERAVEITKTMPMKPDSKIWGSLL 417
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/327 (27%), Positives = 154/327 (47%), Gaps = 36/327 (11%)
Query: 2 YGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTF 61
Y + G MK A+ +F M + +VSWT+MISGY+ G EA+ + +M +G PD+++
Sbjct: 185 YARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISL 244
Query: 62 GSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISI 121
S++ +C G + LG+ +H + + GF N LI MY+ G ++ A +F +
Sbjct: 245 ISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEG 304
Query: 122 KDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQ 181
KD+ISWS+MI G+ G A+ F +M R V +PN + SACS + + G +
Sbjct: 305 KDVISWSTMISGYAYHGNAHGAIETFNEMQRAKV-KPNGITFLGLLSACSHVGMWQEGLR 363
Query: 182 IHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGD 241
F ++R YQIE P + + +I A +G
Sbjct: 364 Y------FDMMRQD-----------------------YQIE-PKIEHYGCLIDVLARAGK 393
Query: 242 ANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNS 301
A+ I + M + PDS + SLL +C +P L+ + ++V++ +++ Y
Sbjct: 394 LERAVEITKTM---PMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLVELE-PEDMGNYVL 449
Query: 302 LLTMYTKCSNLHDALSVFEAISKNANL 328
L +Y D +S + +N N+
Sbjct: 450 LANIYADLGKWED-VSRLRKMIRNENM 475
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 45/72 (62%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
MY KCG + A Q+F M ++V+SW++MISGY+ +G + A+ + +M R+ P+ +T
Sbjct: 285 MYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGIT 344
Query: 61 FGSIIKACCIAG 72
F ++ AC G
Sbjct: 345 FLGLLSACSHVG 356
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 271 bits (694), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 160/544 (29%), Positives = 279/544 (51%), Gaps = 13/544 (2%)
Query: 54 FFPDQLTFGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHAS 113
+ P++ +I C + + +Q+ +I + N +++ A S
Sbjct: 2 YLPEKSVLLELISRC---SSLRVFKQIQTQLITRDLLRDDLIINKVVTFLGKSADFASYS 58
Query: 114 DVF--TMISIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACS 171
V ++ S+ S+++++ + ++ ++ + G + P+ F VF AC
Sbjct: 59 SVILHSIRSVLSSFSYNTLLSSYAVCDKPRVTIFAYKTFVSNG-FSPDMFTFPPVFKACG 117
Query: 172 SLLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNA 231
G+QIHGI K G +++ SL Y CG +A F ++ D+VSW
Sbjct: 118 KFSGIREGKQIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTG 177
Query: 232 IIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVG 291
II F +G EA+ F +M + P+ T++ +L + L+ G IH I+K
Sbjct: 178 IITGFTRTGLYKEALDTFSKM---DVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRA 234
Query: 292 FNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLF 351
+ N+L+ MY KC L DA+ VF + K + VSWN+++S + +++ E LF
Sbjct: 235 SLISLETGNALIDMYVKCEQLSDAMRVFGELEKK-DKVSWNSMISGLVHCERSKEAIDLF 293
Query: 352 KQMLFSEN-KPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAK 410
M S KP+ +T++L CA L +++ G VH + + +G+ D + ++DMYAK
Sbjct: 294 SLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAK 353
Query: 411 CGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGV 470
CG + A +F+ + NV +W++L+ G A+ G G E+L F +M LG +PN VT++
Sbjct: 354 CGYIETALEIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAA 413
Query: 471 LSACSHIGLVEEGWNLYNTME-EELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFD 529
L+AC H GLV+EG ++ M+ E + P EH+ CM+DLL RAG L EA ++
Sbjct: 414 LNACCHTGLVDEGRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMPVK 473
Query: 530 PDITTWKTLLSSCKTHGNV-DIAERAAENILKLDPSNSAALVLLSSIHASAGNWEDVAKL 588
PD+ +LS+CK G + ++ + ++ L ++ +S VLLS+I A+ W+DVA++
Sbjct: 474 PDVRICGAILSACKNRGTLMELPKEILDSFLDIEFEDSGVYVLLSNIFAANRRWDDVARI 533
Query: 589 RKVL 592
R+++
Sbjct: 534 RRLM 537
Score = 191 bits (486), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 131/459 (28%), Positives = 210/459 (45%), Gaps = 38/459 (8%)
Query: 25 SWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTFGSIIKACCIAGDIYLGRQLHAHV 84
S+ +++S Y+ + + Y + +GF PD TF + KAC I G+Q+H V
Sbjct: 73 SYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGKQIHGIV 132
Query: 85 IKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIKDLISWSSMIRGFTQLGYEIEAL 144
K GF + QN L+ Y G+ +A VF + ++D++SW+ +I GFT+ G EAL
Sbjct: 133 TKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKEAL 192
Query: 145 YLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFSGCSLCDM 204
F M +PN V + + G+ IHG+ K + ++ +G +L DM
Sbjct: 193 DTFSKM----DVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNALIDM 248
Query: 205 YAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMM-HIGLIPDSIT 263
Y KC L A F ++E D VSWN++I+ + EAI +F M G+ PD
Sbjct: 249 YVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHI 308
Query: 264 FLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAIS 323
S+L AC S A++ G +H YI+ G + + +++ MY KC + AL +F I
Sbjct: 309 LTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFNGI- 367
Query: 324 KNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGN 383
++ N+ +WNA+L H E+ R F++M+ KPN++T L C
Sbjct: 368 RSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCH-------- 419
Query: 384 QVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSG 443
GL+D + H + + P + + +I +G
Sbjct: 420 ------------------TGLVDEGRR---YFHKMKSREYNLFPKLEHYGCMIDLLCRAG 458
Query: 444 LGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEE 482
L EAL L + M V+P+ +LSAC + G + E
Sbjct: 459 LLDEALELVKAM---PVKPDVRICGAILSACKNRGTLME 494
Score = 176 bits (446), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 110/358 (30%), Positives = 186/358 (51%), Gaps = 8/358 (2%)
Query: 2 YGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTF 61
YG CG ++A +VF M +R+VVSWT +I+G+++ G EA+ + +M P+ T+
Sbjct: 151 YGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKEALDTFSKM---DVEPNLATY 207
Query: 62 GSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISI 121
++ + G + LG+ +H ++K L N LI MY Q++ A VF +
Sbjct: 208 VCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNALIDMYVKCEQLSDAMRVFGELEK 267
Query: 122 KDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQ 181
KD +SW+SMI G EA+ LF M +P+ +L SV SAC+SL ++GR
Sbjct: 268 KDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRW 327
Query: 182 IHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGD 241
+H G+ + G ++ DMYAKCG++ +A F I S ++ +WNA++ A G
Sbjct: 328 VHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFNGIRSKNVFTWNALLGGLAIHGH 387
Query: 242 ANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFN--KEVALY 299
E++ F +M+ +G P+ +TFL+ L AC +++G + + +N ++ Y
Sbjct: 388 GLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDEGRRYFHKMKSREYNLFPKLEHY 447
Query: 300 NSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFS 357
++ + + L +AL + +A+ ++ AILSAC K G L K++L S
Sbjct: 448 GCMIDLLCRAGLLDEALELVKAMPVKPDVRICGAILSAC---KNRGTLMELPKEILDS 502
Score = 138 bits (348), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 112/413 (27%), Positives = 188/413 (45%), Gaps = 18/413 (4%)
Query: 155 VYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCG-FLPS 213
+Y P + VL + S CSSL +QI L+R+ + K F
Sbjct: 1 MYLPEKSVLLELISRCSSL---RVFKQIQTQLITRDLLRDDLIINKVVTFLGKSADFASY 57
Query: 214 AKTAFYQIESP-DLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACT 272
+ + I S S+N +++++A I ++ + G PD TF + AC
Sbjct: 58 SSVILHSIRSVLSSFSYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACG 117
Query: 273 SPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWN 332
+ +G QIH + K+GF ++ + NSL+ Y C +A VF + ++VSW
Sbjct: 118 KFSGIREGKQIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVR-DVVSWT 176
Query: 333 AILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKS 392
I++ + E F +M + +PN+ T +L + + L +G +H +K
Sbjct: 177 GIITGFTRTGLYKEALDTFSKM---DVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKR 233
Query: 393 GLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLF 452
++ + N LIDMY KC + A RVF E + +SW+S+I G EA++LF
Sbjct: 234 ASLISLETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLF 293
Query: 453 RKMR-NLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLA 511
M+ + G++P+ VLSAC+ +G V+ G ++ + GI + +VD+ A
Sbjct: 294 SLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTA-GIKWDTHIGTAIVDMYA 352
Query: 512 RAGCLYEA-ETF--IRKTGFDPDITTWKTLLSSCKTHGNVDIAERAAENILKL 561
+ G + A E F IR ++ TW LL HG+ + R E ++KL
Sbjct: 353 KCGYIETALEIFNGIR----SKNVFTWNALLGGLAIHGHGLESLRYFEEMVKL 401
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 122/252 (48%), Gaps = 13/252 (5%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMY-IQMLRSGFFPDQL 59
MY KC + DA +VF + ++ VSW SMISG + EA+ ++ + SG PD
Sbjct: 248 MYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGH 307
Query: 60 TFGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMI 119
S++ AC G + GR +H +++ +G ++ MY G + A ++F I
Sbjct: 308 ILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFNGI 367
Query: 120 SIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFV-LGSVFSACSSLLEPEY 178
K++ +W++++ G G+ +E+L F +M++ G ++PN L ++ + C + L E
Sbjct: 368 RSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLG-FKPNLVTFLAALNACCHTGLVDEG 426
Query: 179 GRQIHGICAKFGLVRNVFS-----GCSLCDMYAKCGFLPSAKTAFYQIE-SPDLVSWNAI 232
R H + ++ N+F GC + D+ + G L A + PD+ AI
Sbjct: 427 RRYFHKMKSR---EYNLFPKLEHYGC-MIDLLCRAGLLDEALELVKAMPVKPDVRICGAI 482
Query: 233 IAAFADSGDANE 244
++A + G E
Sbjct: 483 LSACKNRGTLME 494
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 271 bits (694), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 156/494 (31%), Positives = 270/494 (54%), Gaps = 18/494 (3%)
Query: 110 AHASDVFTMISIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPN--EFVLGSVF 167
HA +F + +DL S +S + + G + L LF + R P+ V
Sbjct: 35 THADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTLALFLQIHRA---SPDLSSHTFTPVL 91
Query: 168 SACSSLLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLV 227
ACS L PE GRQ+H + K G S +L DMY+K G L + F +E DLV
Sbjct: 92 GACSLLSYPETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLV 151
Query: 228 SWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYI 287
SWNA+++ F +G EA+ +F M + T S++ C S L QG Q+H+ +
Sbjct: 152 SWNALLSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVHAMV 211
Query: 288 VKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGET 347
V G + V L ++++ Y+ +++A+ V+ +++ + + V N+++S C++++ E
Sbjct: 212 VVTGRDL-VVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRNRNYKEA 270
Query: 348 FRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDM 407
F +L S +PN+ +++ L C++ + L +G Q+HC ++++G V D + NGL+DM
Sbjct: 271 F-----LLMSRQRPNVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKLCNGLMDM 325
Query: 408 YAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKM--RNLGVRPNEV 465
Y KCG ++ A+ +F + + +V+SW+S+I YA++G G +AL +FR+M GV PN V
Sbjct: 326 YGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVLPNSV 385
Query: 466 TYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYE----AET 521
T++ V+SAC+H GLV+EG + M+E+ + P EH+ C +D+L++AG E E
Sbjct: 386 TFLVVISACAHAGLVKEGKECFGMMKEKYRLVPGTEHYVCFIDILSKAGETEEIWRLVER 445
Query: 522 FIRKTGFDPDITTWKTLLSSCKTHGNVDIAERAAENIL-KLDPSNSAALVLLSSIHASAG 580
+ W +LS+C + ++ E A ++ + P N++ VL+S+ +A+ G
Sbjct: 446 MMENDNQSIPCAIWVAVLSACSLNMDLTRGEYVARRLMEETGPENASIYVLVSNFYAAMG 505
Query: 581 NWEDVAKLRKVLDD 594
W+ V +LR L +
Sbjct: 506 KWDVVEELRGKLKN 519
Score = 156 bits (395), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 105/346 (30%), Positives = 179/346 (51%), Gaps = 15/346 (4%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
MY K G + D+ +VF+++ +++VSW +++SG+ +NG+G EA+ ++ M R + T
Sbjct: 128 MYSKYGHLVDSVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRERVEISEFT 187
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMIS 120
S++K C + G+Q+HA V+ +G +V +IS Y++ G + A V+ ++
Sbjct: 188 LSSVVKTCASLKILQQGKQVHAMVVVTG-RDLVVLGTAMISFYSSVGLINEAMKVYNSLN 246
Query: 121 I-KDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYG 179
+ D + +S+I G + EA L M RQ +PN VL S + CS + G
Sbjct: 247 VHTDEVMLNSLISGCIRNRNYKEAFLL---MSRQ---RPNVRVLSSSLAGCSDNSDLWIG 300
Query: 180 RQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADS 239
+QIH + + G V + L DMY KCG + A+T F I S +VSW ++I A+A +
Sbjct: 301 KQIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVN 360
Query: 240 GDANEAISIFRQMMH--IGLIPDSITFLSLLCACTSPMALNQGMQIHSYIV-KVGFNKEV 296
GD +A+ IFR+M G++P+S+TFL ++ AC + +G + + K
Sbjct: 361 GDGVKALEIFREMCEEGSGVLPNSVTFLVVISACAHAGLVKEGKECFGMMKEKYRLVPGT 420
Query: 297 ALYNSLLTMYTKCSNLHDALSVFEAISKNAN----LVSWNAILSAC 338
Y + + +K + + E + +N N W A+LSAC
Sbjct: 421 EHYVCFIDILSKAGETEEIWRLVERMMENDNQSIPCAIWVAVLSAC 466
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 116/426 (27%), Positives = 204/426 (47%), Gaps = 19/426 (4%)
Query: 11 ARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTFGSIIKACCI 70
A +FD + R++ S S +S + ++G N+ + +++Q+ R+ TF ++ AC +
Sbjct: 37 ADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTLALFLQIHRASPDLSSHTFTPVLGACSL 96
Query: 71 AGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIKDLISWSSM 130
GRQ+HA +IK G +++ LI MY+ +G + + VF + KDL+SW+++
Sbjct: 97 LSYPETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNAL 156
Query: 131 IRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFG 190
+ GF + G EAL +F M R+ V + +EF L SV C+SL + G+Q+H + G
Sbjct: 157 LSGFLRNGKGKEALGVFAAMYRERV-EISEFTLSSVVKTCASLKILQQGKQVHAMVVVTG 215
Query: 191 LVRN-VFSGCSLCDMYAKCGFLPSAKTAFYQIE-SPDLVSWNAIIAAFADSGDANEAISI 248
R+ V G ++ Y+ G + A + + D V N++I+ + + EA +
Sbjct: 216 --RDLVVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRNRNYKEAFLL 273
Query: 249 FRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTK 308
+ P+ S L C+ L G QIH ++ GF + L N L+ MY K
Sbjct: 274 MSRQR-----PNVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKLCNGLMDMYGK 328
Query: 309 CSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENK--PNMITI 366
C + A ++F AI + +VSW +++ A + + +F++M + PN +T
Sbjct: 329 CGQIVQARTIFRAIPSKS-VVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVLPNSVTF 387
Query: 367 TNLLGTCAELASLEVGNQVHCFSV---KSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDS 423
++ CA ++ G + CF + K LV ID+ +K G R+ +
Sbjct: 388 LVVISACAHAGLVKEGKE--CFGMMKEKYRLVPGTEHYVCFIDILSKAGETEEIWRLVER 445
Query: 424 -TENPN 428
EN N
Sbjct: 446 MMENDN 451
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 92/370 (24%), Positives = 175/370 (47%), Gaps = 14/370 (3%)
Query: 210 FLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLC 269
F A F ++ DL S N+ +++ SG+ N+ +++F Q+ S TF +L
Sbjct: 33 FATHADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTLALFLQIHRASPDLSSHTFTPVLG 92
Query: 270 ACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLV 329
AC+ G Q+H+ ++K G +L+ MY+K +L D++ VFE++ + +LV
Sbjct: 93 ACSLLSYPETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEEK-DLV 151
Query: 330 SWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFS 389
SWNA+LS L++ + E +F M + + T+++++ TCA L L+ G QVH
Sbjct: 152 SWNALLSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVHAMV 211
Query: 390 VKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTE-NPNVISWSSLIVGYAMSGLGHEA 448
V +G L V + +I Y+ G + A +V++S + + + +SLI G + EA
Sbjct: 212 VVTGRDL-VVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRNRNYKEA 270
Query: 449 LNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVD 508
L + RPN L+ CS + G ++ G + + ++D
Sbjct: 271 FLLMSRQ-----RPNVRVLSSSLAGCSDNSDLWIGKQIHCVALRN-GFVSDSKLCNGLMD 324
Query: 509 LLARAGCLYEAETFIRKTGFDPDITTWKTLLSSCKTHGN----VDIAERAAENILKLDPS 564
+ + G + +A T R + +W +++ + +G+ ++I E + P+
Sbjct: 325 MYGKCGQIVQARTIFRAIP-SKSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVLPN 383
Query: 565 NSAALVLLSS 574
+ LV++S+
Sbjct: 384 SVTFLVVISA 393
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 271 bits (692), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 145/416 (34%), Positives = 236/416 (56%), Gaps = 1/416 (0%)
Query: 179 GRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFAD 238
+ HG + L +V L + Y+KCGF+ A+ F + LVSWN +I +
Sbjct: 80 AKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTR 139
Query: 239 SGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVAL 298
+ +EA+ IF +M + G T S+L AC + ++H VK + + +
Sbjct: 140 NRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYV 199
Query: 299 YNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSE 358
+LL +Y KC + DA+ VFE++ ++ V+W+++++ +Q+K E L+++
Sbjct: 200 GTALLDLYAKCGMIKDAVQVFESMQDKSS-VTWSSMVAGYVQNKNYEEALLLYRRAQRMS 258
Query: 359 NKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQ 418
+ N T+++++ C+ LA+L G Q+H KSG +V V++ +DMYAKCGS+ +
Sbjct: 259 LEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESY 318
Query: 419 RVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIG 478
+F + N+ W+++I G+A E + LF KM+ G+ PNEVT+ +LS C H G
Sbjct: 319 IIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTG 378
Query: 479 LVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTL 538
LVEEG + M G+ P H+SCMVD+L RAG L EA I+ FDP + W +L
Sbjct: 379 LVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSL 438
Query: 539 LSSCKTHGNVDIAERAAENILKLDPSNSAALVLLSSIHASAGNWEDVAKLRKVLDD 594
L+SC+ + N+++AE AAE + +L+P N+ VLLS+I+A+ WE++AK RK+L D
Sbjct: 439 LASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKLLRD 494
Score = 196 bits (499), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 116/372 (31%), Positives = 191/372 (51%), Gaps = 6/372 (1%)
Query: 2 YGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTF 61
Y KCG ++ ARQVFD M R++VSW +MI Y++N +EA+ ++++M GF + T
Sbjct: 106 YSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTI 165
Query: 62 GSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISI 121
S++ AC + D ++LH +K+ +L L+ +Y G + A VF +
Sbjct: 166 SSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQD 225
Query: 122 KDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQ 181
K ++WSSM+ G+ Q EAL L+R R + Q N+F L SV ACS+L G+Q
Sbjct: 226 KSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQ-NQFTLSSVICACSNLAALIEGKQ 284
Query: 182 IHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGD 241
+H + K G NVF S DMYAKCG L + F +++ +L WN II+ FA
Sbjct: 285 MHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHAR 344
Query: 242 ANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYI-VKVGFNKEVALYN 300
E + +F +M G+ P+ +TF SLL C + +G + + G + V Y+
Sbjct: 345 PKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYS 404
Query: 301 SLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFS--- 357
++ + + L +A + ++I + W ++L++C +K E + + LF
Sbjct: 405 CMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLASCRVYKNL-ELAEVAAEKLFELEP 463
Query: 358 ENKPNMITITNL 369
EN N + ++N+
Sbjct: 464 ENAGNHVLLSNI 475
Score = 179 bits (454), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 109/387 (28%), Positives = 197/387 (50%), Gaps = 4/387 (1%)
Query: 52 SGFFPDQLTFGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAH 111
S F ++ I++ C G + + H +I+ G + N LI+ Y+ G V
Sbjct: 55 SNEFSNRNLVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVEL 114
Query: 112 ASDVFTMISIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACS 171
A VF + + L+SW++MI +T+ E EAL +F +M +G ++ +EF + SV SAC
Sbjct: 115 ARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEG-FKFSEFTISSVLSACG 173
Query: 172 SLLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNA 231
+ +++H + K + N++ G +L D+YAKCG + A F ++ V+W++
Sbjct: 174 VNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSS 233
Query: 232 IIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVG 291
++A + + + EA+ ++R+ + L + T S++CAC++ AL +G Q+H+ I K G
Sbjct: 234 MVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSG 293
Query: 292 FNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLF 351
F V + +S + MY KC +L ++ +F + + NL WN I+S +H + E LF
Sbjct: 294 FGSNVFVASSAVDMYAKCGSLRESYIIFSEV-QEKNLELWNTIISGFAKHARPKEVMILF 352
Query: 352 KQMLFSENKPNMITITNLLGTCAELASLEVGNQ-VHCFSVKSGLVLDVSVSNGLIDMYAK 410
++M PN +T ++LL C +E G + GL +V + ++D+ +
Sbjct: 353 EKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGR 412
Query: 411 CGSVIHAQRVFDSTE-NPNVISWSSLI 436
G + A + S +P W SL+
Sbjct: 413 AGLLSEAYELIKSIPFDPTASIWGSLL 439
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 74/237 (31%), Positives = 123/237 (51%), Gaps = 3/237 (1%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
+Y KCG +KDA QVF++M ++ V+W+SM++GY QN EA+++Y + R +Q T
Sbjct: 206 LYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFT 265
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMIS 120
S+I AC + G+Q+HA + KSGFG ++ + + MY G + + +F+ +
Sbjct: 266 LSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQ 325
Query: 121 IKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGR 180
K+L W+++I GF + E + LF M + G++ PNE S+ S C E GR
Sbjct: 326 EKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMH-PNEVTFSSLLSVCGHTGLVEEGR 384
Query: 181 QIHGIC-AKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIE-SPDLVSWNAIIAA 235
+ + +GL NV + D+ + G L A I P W +++A+
Sbjct: 385 RFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLAS 441
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 66/119 (55%)
Query: 356 FSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVI 415
+S N + +L CA ++ H ++ L DV++ N LI+ Y+KCG V
Sbjct: 54 YSNEFSNRNLVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVE 113
Query: 416 HAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSAC 474
A++VFD +++SW+++I Y + + EAL++F +MRN G + +E T VLSAC
Sbjct: 114 LARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSAC 172
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 270 bits (689), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 139/394 (35%), Positives = 231/394 (58%), Gaps = 6/394 (1%)
Query: 201 LCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPD 260
L +MY K L A F Q+ +++SW +I+A++ +A+ + M+ + P+
Sbjct: 102 LINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPN 161
Query: 261 SITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFE 320
T+ S+L +C ++ +H I+K G +V + ++L+ ++ K DALSVF+
Sbjct: 162 VYTYSSVLRSCN---GMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFD 218
Query: 321 AISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLE 380
+ + + WN+I+ Q+ ++ LFK+M + T+T++L C LA LE
Sbjct: 219 EMV-TGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLE 277
Query: 381 VGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYA 440
+G Q H VK D+ ++N L+DMY KCGS+ A RVF+ + +VI+WS++I G A
Sbjct: 278 LGMQAHVHIVKYDQ--DLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLA 335
Query: 441 MSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAR 500
+G EAL LF +M++ G +PN +T VGVL ACSH GL+E+GW + +M++ GI P R
Sbjct: 336 QNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVR 395
Query: 501 EHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTLLSSCKTHGNVDIAERAAENILK 560
EH+ CM+DLL +AG L +A + + +PD TW+TLL +C+ N+ +AE AA+ ++
Sbjct: 396 EHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIA 455
Query: 561 LDPSNSAALVLLSSIHASAGNWEDVAKLRKVLDD 594
LDP ++ LLS+I+A++ W+ V ++R + D
Sbjct: 456 LDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRD 489
Score = 189 bits (481), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 121/387 (31%), Positives = 207/387 (53%), Gaps = 11/387 (2%)
Query: 53 GFFPDQLTFGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHA 112
G + D T+ +IK C ++ G + H+ +G + N LI+MY F + A
Sbjct: 56 GLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDA 115
Query: 113 SDVFTMISIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSS 172
+F + +++ISW++MI +++ +AL L MLR V +PN + SV +C+
Sbjct: 116 HQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNV-RPNVYTYSSVLRSCNG 174
Query: 173 LLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAI 232
+ + R +H K GL +VF +L D++AK G A + F ++ + D + WN+I
Sbjct: 175 MSDV---RMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSI 231
Query: 233 IAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGF 292
I FA + ++ A+ +F++M G I + T S+L ACT L GMQ H +IVK +
Sbjct: 232 IGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK--Y 289
Query: 293 NKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFK 352
++++ L N+L+ MY KC +L DAL VF + K ++++W+ ++S Q+ + E +LF+
Sbjct: 290 DQDLILNNALVDMYCKCGSLEDALRVFNQM-KERDVITWSTMISGLAQNGYSQEALKLFE 348
Query: 353 QMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLD-VSVSNG-LIDMYAK 410
+M S KPN ITI +L C+ LE G + S+K +D V G +ID+ K
Sbjct: 349 RMKSSGTKPNYITIVGVLFACSHAGLLEDG-WYYFRSMKKLYGIDPVREHYGCMIDLLGK 407
Query: 411 CGSVIHAQRVFDSTE-NPNVISWSSLI 436
G + A ++ + E P+ ++W +L+
Sbjct: 408 AGKLDDAVKLLNEMECEPDAVTWRTLL 434
Score = 181 bits (458), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 108/339 (31%), Positives = 172/339 (50%), Gaps = 7/339 (2%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
MY K + DA Q+FD M RNV+SWT+MIS YS+ +A+ + + MLR P+ T
Sbjct: 105 MYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYT 164
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMIS 120
+ S++++C D+ R LH +IK G + ++ LI ++ G+ A VF +
Sbjct: 165 YSSVLRSCNGMSDV---RMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMV 221
Query: 121 IKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGR 180
D I W+S+I GF Q AL LF+ M R G + + L SV AC+ L E G
Sbjct: 222 TGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAG-FIAEQATLTSVLRACTGLALLELGM 280
Query: 181 QIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSG 240
Q H K+ +++ +L DMY KCG L A F Q++ D+++W+ +I+ A +G
Sbjct: 281 QAHVHIVKYD--QDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNG 338
Query: 241 DANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKV-GFNKEVALY 299
+ EA+ +F +M G P+ IT + +L AC+ L G + K+ G + Y
Sbjct: 339 YSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHY 398
Query: 300 NSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSAC 338
++ + K L DA+ + + + V+W +L AC
Sbjct: 399 GCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGAC 437
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 92/312 (29%), Positives = 156/312 (50%), Gaps = 20/312 (6%)
Query: 241 DANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYN 300
D A+ + GL DS T+ L+ C S A+++G I ++ G + L N
Sbjct: 41 DLPRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVN 100
Query: 301 SLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSA---CLQHKQAGETFRLFKQMLFS 357
L+ MY K + L+DA +F+ + + N++SW ++SA C H++A E L ML
Sbjct: 101 VLINMYVKFNLLNDAHQLFDQMPQR-NVISWTTMISAYSKCKIHQKALELLVL---MLRD 156
Query: 358 ENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHA 417
+PN+ T +++L +C ++ + + +HC +K GL DV V + LID++AK G A
Sbjct: 157 NVRPNVYTYSSVLRSCNGMSDVRM---LHCGIIKEGLESDVFVRSALIDVFAKLGEPEDA 213
Query: 418 QRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHI 477
VFD + I W+S+I G+A + AL LF++M+ G + T VL AC+ +
Sbjct: 214 LSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGL 273
Query: 478 GLVEEGWNLYNTMEEELGIPPAREHF---SCMVDLLARAGCLYEAETFIRKTGFDPDITT 534
L+E G M+ + I + + +VD+ + G L +A + + D+ T
Sbjct: 274 ALLELG------MQAHVHIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQMK-ERDVIT 326
Query: 535 WKTLLSSCKTHG 546
W T++S +G
Sbjct: 327 WSTMISGLAQNG 338
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 77/162 (47%), Gaps = 29/162 (17%)
Query: 402 NGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVR 461
N LI+MY K + A ++FD NVISW+++I Y+ + +AL L M VR
Sbjct: 100 NVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVR 159
Query: 462 PNEVTYVGVLSACS--------HIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARA 513
PN TY VL +C+ H G+++EG +E ++ + A ++D+ A+
Sbjct: 160 PNVYTYSSVLRSCNGMSDVRMLHCGIIKEG------LESDVFVRSA------LIDVFAKL 207
Query: 514 GCLYEAETFIRKTGFDPDIT----TWKTLLSSCKTHGNVDIA 551
G E E + + FD +T W +++ + D+A
Sbjct: 208 G---EPEDAL--SVFDEMVTGDAIVWNSIIGGFAQNSRSDVA 244
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 268 bits (686), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 169/538 (31%), Positives = 276/538 (51%), Gaps = 14/538 (2%)
Query: 63 SIIKACCIAGDIYL-GRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISI 121
S+IKAC + +L G QLH +K+G V N LISMY F + VF +
Sbjct: 51 SVIKACAFQQEPFLLGAQLHCLCLKAGADCDTVVSNSLISMYAKFSRKYAVRKVFDEMLH 110
Query: 122 KDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSL-LEPEYGR 180
+D +S+ S+I Q G EA+ L ++M G + P ++ S+ + C+ + + R
Sbjct: 111 RDTVSYCSIINSCCQDGLLYEAMKLIKEMYFYG-FIPKSELVASLLALCTRMGSSSKVAR 169
Query: 181 QIHG-ICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADS 239
H + + +V +L DMY K +A F Q+E + VSW A+I+ +
Sbjct: 170 MFHALVLVDERMQESVLLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVAN 229
Query: 240 GDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQG----MQIHSYIVKVGFNKE 295
+ + +FR M L P+ +T LS+L AC LN G +IH + + G + +
Sbjct: 230 QNYEMGVDLFRAMQRENLRPNRVTLLSVLPACVE---LNYGSSLVKEIHGFSFRHGCHAD 286
Query: 296 VALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQML 355
L + +TMY +C N+ + +FE SK ++V W++++S + E L QM
Sbjct: 287 ERLTAAFMTMYCRCGNVSLSRVLFET-SKVRDVVMWSSMISGYAETGDCSEVMNLLNQMR 345
Query: 356 FSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVI 415
+ N +T+ ++ C L + VH +K G + + + N LIDMYAKCGS+
Sbjct: 346 KEGIEANSVTLLAIVSACTNSTLLSFASTVHSQILKCGFMSHILLGNALIDMYAKCGSLS 405
Query: 416 HAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACS 475
A+ VF +++SWSS+I Y + G G EAL +F+ M G +++ ++ +LSAC+
Sbjct: 406 AAREVFYELTEKDLVSWSSMINAYGLHGHGSEALEIFKGMIKGGHEVDDMAFLAILSACN 465
Query: 476 HIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTW 535
H GLVEE ++ T + +P EH++C ++LL R G + +A P W
Sbjct: 466 HAGLVEEAQTIF-TQAGKYHMPVTLEHYACYINLLGRFGKIDDAFEVTINMPMKPSARIW 524
Query: 536 KTLLSSCKTHGNVDIAER-AAENILKLDPSNSAALVLLSSIHASAGNWEDVAKLRKVL 592
+LLS+C+THG +D+A + A ++K +P N A VLLS IH +GN+ ++R+V+
Sbjct: 525 SSLLSACETHGRLDVAGKIIANELMKSEPDNPANYVLLSKIHTESGNYHAAEEVRRVM 582
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 126/444 (28%), Positives = 219/444 (49%), Gaps = 14/444 (3%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
MY K R+VFD M R+ VS+ S+I+ Q+G EA+ + +M GF P
Sbjct: 91 MYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDGLLYEAMKLIKEMYFYGFIPKSEL 150
Query: 61 FGSIIKACCIAG-DIYLGRQLHAHV-IKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTM 118
S++ C G + R HA V + ++ L+ MY F A A VF
Sbjct: 151 VASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALVDMYLKFDDHAAAFHVFDQ 210
Query: 119 ISIKDLISWSSMIRG-FTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPE 177
+ +K+ +SW++MI G YE+ + LFR M R+ + +PN L SV AC +E
Sbjct: 211 MEVKNEVSWTAMISGCVANQNYEM-GVDLFRAMQRENL-RPNRVTLLSVLPAC---VELN 265
Query: 178 YG----RQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAII 233
YG ++IHG + G + + MY +CG + ++ F + D+V W+++I
Sbjct: 266 YGSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMWSSMI 325
Query: 234 AAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFN 293
+ +A++GD +E +++ QM G+ +S+T L+++ ACT+ L+ +HS I+K GF
Sbjct: 326 SGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQILKCGFM 385
Query: 294 KEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQ 353
+ L N+L+ MY KC +L A VF +++ +LVSW+++++A H E +FK
Sbjct: 386 SHILLGNALIDMYAKCGSLSAAREVFYELTEK-DLVSWSSMINAYGLHGHGSEALEIFKG 444
Query: 354 MLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGS 413
M+ ++ + + +L C +E + + K + + + I++ + G
Sbjct: 445 MIKGGHEVDDMAFLAILSACNHAGLVEEAQTIFTQAGKYHMPVTLEHYACYINLLGRFGK 504
Query: 414 VIHAQRV-FDSTENPNVISWSSLI 436
+ A V + P+ WSSL+
Sbjct: 505 IDDAFEVTINMPMKPSARIWSSLL 528
Score = 163 bits (412), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 99/342 (28%), Positives = 168/342 (49%), Gaps = 2/342 (0%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
MY K A VFD M ++N VSWT+MISG N V ++ M R P+++T
Sbjct: 194 MYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVT 253
Query: 61 FGSIIKACC-IAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMI 119
S++ AC + L +++H + G ++MY G V+ + +F
Sbjct: 254 LLSVLPACVELNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETS 313
Query: 120 SIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYG 179
++D++ WSSMI G+ + G E + L M ++G+ + N L ++ SAC++ +
Sbjct: 314 KVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGI-EANSVTLLAIVSACTNSTLLSFA 372
Query: 180 RQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADS 239
+H K G + ++ G +L DMYAKCG L +A+ FY++ DLVSW+++I A+
Sbjct: 373 STVHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYGLH 432
Query: 240 GDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALY 299
G +EA+ IF+ M+ G D + FL++L AC + + I + K + Y
Sbjct: 433 GHGSEALEIFKGMIKGGHEVDDMAFLAILSACNHAGLVEEAQTIFTQAGKYHMPVTLEHY 492
Query: 300 NSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQH 341
+ + + + DA V + + W+++LSAC H
Sbjct: 493 ACYINLLGRFGKIDDAFEVTINMPMKPSARIWSSLLSACETH 534
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 84/167 (50%), Gaps = 2/167 (1%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
MY KCGS+ AR+VF + +++VSW+SMI+ Y +G G+EA+ ++ M++ G D +
Sbjct: 397 MYAKCGSLSAAREVFYELTEKDLVSWSSMINAYGLHGHGSEALEIFKGMIKGGHEVDDMA 456
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMIS 120
F +I+ AC AG + + + K L I++ FG++ A +V +
Sbjct: 457 FLAILSACNHAGLVEEAQTIFTQAGKYHMPVTLEHYACYINLLGRFGKIDDAFEVTINMP 516
Query: 121 IKDLIS-WSSMIRGFTQLG-YEIEALYLFRDMLRQGVYQPNEFVLGS 165
+K WSS++ G ++ + ++++ P +VL S
Sbjct: 517 MKPSARIWSSLLSACETHGRLDVAGKIIANELMKSEPDNPANYVLLS 563
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 268 bits (686), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 147/471 (31%), Positives = 247/471 (52%), Gaps = 36/471 (7%)
Query: 157 QPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFSGC---SLCDMYAKCGFLPS 213
+ N + S CS + E +QIH K GL+++ ++ S C FLP
Sbjct: 11 EHNLYETMSCLQRCS---KQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPY 67
Query: 214 AKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTS 273
A+ F + PD WN +I F+ S + ++ ++++M+ ++ TF SLL AC++
Sbjct: 68 AQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSN 127
Query: 274 PMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISK--------- 324
A + QIH+ I K+G+ +V NSL+ Y N A +F+ I +
Sbjct: 128 LSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSV 187
Query: 325 ---------------------NANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNM 363
N +SW ++S +Q E +LF +M S+ +P+
Sbjct: 188 IKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDN 247
Query: 364 ITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDS 423
+++ N L CA+L +LE G +H + K+ + +D + LIDMYAKCG + A VF +
Sbjct: 248 VSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKN 307
Query: 424 TENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEG 483
+ +V +W++LI GYA G G EA++ F +M+ +G++PN +T+ VL+ACS+ GLVEEG
Sbjct: 308 IKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEG 367
Query: 484 WNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTLLSSCK 543
++ +ME + + P EH+ C+VDLL RAG L EA+ FI++ P+ W LL +C+
Sbjct: 368 KLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACR 427
Query: 544 THGNVDIAERAAENILKLDPSNSAALVLLSSIHASAGNWEDVAKLRKVLDD 594
H N+++ E E ++ +DP + V ++IHA W+ A+ R+++ +
Sbjct: 428 IHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKE 478
Score = 158 bits (400), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 107/365 (29%), Positives = 170/365 (46%), Gaps = 35/365 (9%)
Query: 11 ARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTFGSIIKACCI 70
A+ VFD + W MI G+S + + ++++Y +ML S + TF S++KAC
Sbjct: 68 AQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSN 127
Query: 71 AGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTN----------FGQVAHASDV----- 115
Q+HA + K G+ + A N LI+ Y F ++ DV
Sbjct: 128 LSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSV 187
Query: 116 ----------------FTMISIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPN 159
F ++ K+ ISW++MI G+ Q EAL LF +M V +P+
Sbjct: 188 IKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDV-EPD 246
Query: 160 EFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFY 219
L + SAC+ L E G+ IH K + + GC L DMYAKCG + A F
Sbjct: 247 NVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFK 306
Query: 220 QIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQ 279
I+ + +W A+I+ +A G EAIS F +M +G+ P+ ITF ++L AC+ + +
Sbjct: 307 NIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEE 366
Query: 280 GMQIHSYIVKVGFNKEVAL--YNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSA 337
G I Y ++ +N + + Y ++ + + L +A + + N V W A+L A
Sbjct: 367 GKLIF-YSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKA 425
Query: 338 CLQHK 342
C HK
Sbjct: 426 CRIHK 430
Score = 145 bits (367), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 110/400 (27%), Positives = 180/400 (45%), Gaps = 48/400 (12%)
Query: 78 RQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASD-------VFTMISIKDLISWSSM 130
+Q+HA ++K+G L+ + I+ + +F + +SD VF D W+ M
Sbjct: 31 KQIHARMLKTG----LMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDTFLWNLM 86
Query: 131 IRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFG 190
IRGF+ +L L++ ML N + S+ ACS+L E QIH K G
Sbjct: 87 IRGFSCSDEPERSLLLYQRMLCSSAPH-NAYTFPSLLKACSNLSAFEETTQIHAQITKLG 145
Query: 191 LVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFR 250
+V++ SL + YA G A F +I PD VSWN++I + +G + A+++FR
Sbjct: 146 YENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFR 205
Query: 251 QMMHIGLI-------------------------------PDSITFLSLLCACTSPMALNQ 279
+M I PD+++ + L AC AL Q
Sbjct: 206 KMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQ 265
Query: 280 GMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACL 339
G IHSY+ K + L L+ MY KC + +AL VF+ I K + + +W A++S
Sbjct: 266 GKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKS-VQAWTALISGYA 324
Query: 340 QHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVS 399
H E F +M KPN+IT T +L C+ +E G + +S++ L +
Sbjct: 325 YHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIF-YSMERDYNLKPT 383
Query: 400 VSN--GLIDMYAKCGSVIHAQRVFDSTE-NPNVISWSSLI 436
+ + ++D+ + G + A+R PN + W +L+
Sbjct: 384 IEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALL 423
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 118/236 (50%), Gaps = 3/236 (1%)
Query: 2 YGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTF 61
Y K G M A +F M +N +SWT+MISGY Q EA+ ++ +M S PD ++
Sbjct: 191 YVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSL 250
Query: 62 GSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISI 121
+ + AC G + G+ +H+++ K+ V LI MY G++ A +VF I
Sbjct: 251 ANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKK 310
Query: 122 KDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQ 181
K + +W+++I G+ G+ EA+ F +M + G+ +PN +V +ACS E G+
Sbjct: 311 KSVQAWTALISGYAYHGHGREAISKFMEMQKMGI-KPNVITFTAVLTACSYTGLVEEGKL 369
Query: 182 I-HGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIE-SPDLVSWNAIIAA 235
I + + + L + + D+ + G L AK ++ P+ V W A++ A
Sbjct: 370 IFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKA 425
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 52/78 (66%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
MY KCG M++A +VF + ++V +WT++ISGY+ +G G EA+ +++M + G P+ +T
Sbjct: 291 MYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVIT 350
Query: 61 FGSIIKACCIAGDIYLGR 78
F +++ AC G + G+
Sbjct: 351 FTAVLTACSYTGLVEEGK 368
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 268 bits (685), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 161/524 (30%), Positives = 267/524 (50%), Gaps = 49/524 (9%)
Query: 78 RQLHAHVIKSGFGGHLVAQNGLI--SMYTNFGQVAHASDVFTMISIKDLISWSSMIRGFT 135
+Q+HA ++ +G +L LI + + G + +A +F I D+ + ++RG
Sbjct: 29 KQIHASMVVNGLMSNLSVVGELIYSASLSVPGALKYAHKLFDEIPKPDVSICNHVLRGSA 88
Query: 136 QLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNV 195
Q + + L+ +M ++GV P+ + V ACS L G HG + G V N
Sbjct: 89 QSMKPEKTVSLYTEMEKRGV-SPDRYTFTFVLKACSKLEWRSNGFAFHGKVVRHGFVLNE 147
Query: 196 FSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHI 255
+ +L +A CG L A F V+W+++ + +A G +EA+ +F +M +
Sbjct: 148 YVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEMPY- 206
Query: 256 GLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDA 315
K+ +N ++T KC + A
Sbjct: 207 --------------------------------------KDQVAWNVMITGCLKCKEMDSA 228
Query: 316 LSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAE 375
+F+ ++ ++V+WNA++S + E +FK+M + P+++TI +LL CA
Sbjct: 229 RELFDRFTEK-DVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAV 287
Query: 376 LASLEVGNQVHCF-----SVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVI 430
L LE G ++H + SV S + + + N LIDMYAKCGS+ A VF ++ ++
Sbjct: 288 LGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLS 347
Query: 431 SWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTM 490
+W++LIVG A+ ++ +F +M+ L V PNEVT++GV+ ACSH G V+EG ++ M
Sbjct: 348 TWNTLIVGLALHH-AEGSIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLM 406
Query: 491 EEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTLLSSCKTHGNVDI 550
+ I P +H+ CMVD+L RAG L EA F+ +P+ W+TLL +CK +GNV++
Sbjct: 407 RDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESMKIEPNAIVWRTLLGACKIYGNVEL 466
Query: 551 AERAAENILKLDPSNSAALVLLSSIHASAGNWEDVAKLRKVLDD 594
+ A E +L + S VLLS+I+AS G W+ V K+RK+ DD
Sbjct: 467 GKYANEKLLSMRKDESGDYVLLSNIYASTGQWDGVQKVRKMFDD 510
Score = 159 bits (402), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 115/441 (26%), Positives = 204/441 (46%), Gaps = 55/441 (12%)
Query: 6 GSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTFGSII 65
G++K A ++FD + +V ++ G +Q+ + + V +Y +M + G PD+ TF ++
Sbjct: 60 GALKYAHKLFDEIPKPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVL 119
Query: 66 KACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIKDLI 125
KAC G H V++ GF + +N LI + N G + AS++F + +
Sbjct: 120 KACSKLEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKV 179
Query: 126 SWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGI 185
+WSSM G+ + G EA+ LF +M Y Q+
Sbjct: 180 AWSSMTSGYAKRGKIDEAMRLFDEM--------------------------PYKDQV--- 210
Query: 186 CAKFGLVRNVF-SGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANE 244
NV +GC KC + SA+ F + D+V+WNA+I+ + + G E
Sbjct: 211 ------AWNVMITGC------LKCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKE 258
Query: 245 AISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKE-----VALY 299
A+ IF++M G PD +T LSLL AC L G ++H YI++ ++
Sbjct: 259 ALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIW 318
Query: 300 NSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSEN 359
N+L+ MY KC ++ A+ VF + K+ +L +WN ++ H G + +F++M +
Sbjct: 319 NALIDMYAKCGSIDRAIEVFRGV-KDRDLSTWNTLIVGLALHHAEG-SIEMFEEMQRLKV 376
Query: 360 KPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLV---LDVSVSNGLIDMYAKCGSVIH 416
PN +T ++ C+ ++ G + FS+ + ++ ++DM + G +
Sbjct: 377 WPNEVTFIGVILACSHSGRVDEGRKY--FSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEE 434
Query: 417 AQRVFDSTE-NPNVISWSSLI 436
A +S + PN I W +L+
Sbjct: 435 AFMFVESMKIEPNAIVWRTLL 455
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 165/344 (47%), Gaps = 49/344 (14%)
Query: 2 YGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTF 61
+ CG + A ++FD + V+W+SM SGY++ G+ +EA+ ++ +M + DQ+ +
Sbjct: 157 HANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEMP----YKDQVAW 212
Query: 62 GSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISI 121
+I C ++ R+L F +
Sbjct: 213 NVMITGCLKCKEMDSAREL-----------------------------------FDRFTE 237
Query: 122 KDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQ 181
KD+++W++MI G+ GY EAL +F++M R P+ + S+ SAC+ L + E G++
Sbjct: 238 KDVVTWNAMISGYVNCGYPKEALGIFKEM-RDAGEHPDVVTILSLLSACAVLGDLETGKR 296
Query: 182 IH-GICAKFGLVRNVFSGC----SLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAF 236
+H I + +++ G +L DMYAKCG + A F ++ DL +WN +I
Sbjct: 297 LHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGL 356
Query: 237 ADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKE- 295
A A +I +F +M + + P+ +TF+ ++ AC+ +++G + S +++ +N E
Sbjct: 357 A-LHHAEGSIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFS-LMRDMYNIEP 414
Query: 296 -VALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSAC 338
+ Y ++ M + L +A E++ N + W +L AC
Sbjct: 415 NIKHYGCMVDMLGRAGQLEEAFMFVESMKIEPNAIVWRTLLGAC 458
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/272 (29%), Positives = 138/272 (50%), Gaps = 37/272 (13%)
Query: 4 KCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTFGS 63
KC M AR++FD ++VV+W +MISGY G EA+ ++ +M +G PD +T S
Sbjct: 221 KCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILS 280
Query: 64 IIKACCIAGDIYLGRQLHAHVIKSG------FGGHLVAQNGLISMYTNFGQVAHASDVFT 117
++ AC + GD+ G++LH +++++ + G + N LI MY G + A +VF
Sbjct: 281 LLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPI-WNALIDMYAKCGSIDRAIEVFR 339
Query: 118 MISIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPE 177
+ +DL +W+++I G L + ++ +F +M R V+ PNE V ACS +
Sbjct: 340 GVKDRDLSTWNTLIVGLA-LHHAEGSIEMFEEMQRLKVW-PNEVTFIGVILACSHSGRVD 397
Query: 178 YGRQIHGICAKFGLVRNVFS--------GCSLCDMYAKCGFLPSAKTAFYQIES----PD 225
GR+ F L+R++++ GC + DM + G L + AF +ES P+
Sbjct: 398 EGRKY------FSLMRDMYNIEPNIKHYGC-MVDMLGRAGQL---EEAFMFVESMKIEPN 447
Query: 226 LVSWNAIIAAFADSGD------ANEAISIFRQ 251
+ W ++ A G+ ANE + R+
Sbjct: 448 AIVWRTLLGACKIYGNVELGKYANEKLLSMRK 479
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 268 bits (685), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 132/318 (41%), Positives = 205/318 (64%), Gaps = 3/318 (0%)
Query: 280 GMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACL 339
G IHS +++ GF + + NSLL +Y C ++ A VF+ + + +LV+WN++++
Sbjct: 7 GETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEK-DLVAWNSVINGFA 65
Query: 340 QHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVS 399
++ + E L+ +M KP+ TI +LL CA++ +L +G +VH + +K GL ++
Sbjct: 66 ENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLH 125
Query: 400 VSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNL- 458
SN L+D+YA+CG V A+ +FD + N +SW+SLIVG A++G G EA+ LF+ M +
Sbjct: 126 SSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTE 185
Query: 459 GVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYE 518
G+ P E+T+VG+L ACSH G+V+EG+ + M EE I P EHF CMVDLLARAG + +
Sbjct: 186 GLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKK 245
Query: 519 AETFIRKTGFDPDITTWKTLLSSCKTHGNVDIAERAAENILKLDPSNSAALVLLSSIHAS 578
A +I+ P++ W+TLL +C HG+ D+AE A IL+L+P++S VLLS+++AS
Sbjct: 246 AYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYAS 305
Query: 579 AGNWEDVAKLRK-VLDDG 595
W DV K+RK +L DG
Sbjct: 306 EQRWSDVQKIRKQMLRDG 323
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 89/272 (32%), Positives = 148/272 (54%), Gaps = 3/272 (1%)
Query: 72 GDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIKDLISWSSMI 131
D+ LG +H+ VI+SGFG + QN L+ +Y N G VA A VF + KDL++W+S+I
Sbjct: 2 ADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVI 61
Query: 132 RGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGL 191
GF + G EAL L+ +M +G+ +P+ F + S+ SAC+ + G+++H K GL
Sbjct: 62 NGFAENGKPEEALALYTEMNSKGI-KPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGL 120
Query: 192 VRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQ 251
RN+ S L D+YA+CG + AKT F ++ + VSW ++I A +G EAI +F+
Sbjct: 121 TRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKY 180
Query: 252 MMHI-GLIPDSITFLSLLCACTSPMALNQGMQIHSYIV-KVGFNKEVALYNSLLTMYTKC 309
M GL+P ITF+ +L AC+ + +G + + + + + ++ + +
Sbjct: 181 MESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARA 240
Query: 310 SNLHDALSVFEAISKNANLVSWNAILSACLQH 341
+ A +++ N+V W +L AC H
Sbjct: 241 GQVKKAYEYIKSMPMQPNVVIWRTLLGACTVH 272
Score = 132 bits (331), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 85/290 (29%), Positives = 148/290 (51%), Gaps = 10/290 (3%)
Query: 179 GRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFAD 238
G IH + + G ++ SL +YA CG + SA F ++ DLV+WN++I FA+
Sbjct: 7 GETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAE 66
Query: 239 SGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVAL 298
+G EA++++ +M G+ PD T +SLL AC AL G ++H Y++KVG + +
Sbjct: 67 NGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHS 126
Query: 299 YNSLLTMYTKCSNLHDALSVF-EAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFS 357
N LL +Y +C + +A ++F E + KN+ VSW +++ + E LFK M +
Sbjct: 127 SNVLLDLYARCGRVEEAKTLFDEMVDKNS--VSWTSLIVGLAVNGFGKEAIELFKYMEST 184
Query: 358 EN-KPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSN--GLIDMYAKCGSV 414
E P IT +L C+ ++ G + + ++ ++ + + ++D+ A+ G V
Sbjct: 185 EGLLPCEITFVGILYACSHCGMVKEGFE-YFRRMREEYKIEPRIEHFGCMVDLLARAGQV 243
Query: 415 IHAQRVFDSTE-NPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPN 463
A S PNV+ W +L+ A + G L F +++ L + PN
Sbjct: 244 KKAYEYIKSMPMQPNVVIWRTLL--GACTVHGDSDLAEFARIQILQLEPN 291
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 142/268 (52%), Gaps = 16/268 (5%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
+Y CG + A +VFD M +++V+W S+I+G+++NG+ EA+ +Y +M G PD T
Sbjct: 32 LYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFT 91
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMIS 120
S++ AC G + LG+++H ++IK G +L + N L+ +Y G+V A +F +
Sbjct: 92 IVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMV 151
Query: 121 IKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACS--SLLEP-- 176
K+ +SW+S+I G G+ EA+ LF+ M P E + ACS +++
Sbjct: 152 DKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGF 211
Query: 177 EYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIES----PDLVSWNAI 232
EY R++ ++ + + + D+ A+ G K A+ I+S P++V W +
Sbjct: 212 EYFRRMR---EEYKIEPRIEHFGCMVDLLARAG---QVKKAYEYIKSMPMQPNVVIWRTL 265
Query: 233 IAAFADSGDANEAISIFRQMMHIGLIPD 260
+ A GD++ ++ F ++ + L P+
Sbjct: 266 LGACTVHGDSD--LAEFARIQILQLEPN 291
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 96/171 (56%), Gaps = 2/171 (1%)
Query: 376 LASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSL 435
+A + +G +H ++SG + V N L+ +YA CG V A +VFD ++++W+S+
Sbjct: 1 MADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSV 60
Query: 436 IVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELG 495
I G+A +G EAL L+ +M + G++P+ T V +LSAC+ IG + G ++ M ++G
Sbjct: 61 INGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYM-IKVG 119
Query: 496 IPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTLLSSCKTHG 546
+ + ++DL AR G + EA+T + D + +W +L+ +G
Sbjct: 120 LTRNLHSSNVLLDLYARCGRVEEAKTLFDEM-VDKNSVSWTSLIVGLAVNG 169
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 267 bits (682), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 159/525 (30%), Positives = 264/525 (50%), Gaps = 24/525 (4%)
Query: 78 RQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIKDLISWSSMIRGFTQ- 136
+Q H ++K G L QN L+ YT + A +F + ++++++W+ +I G Q
Sbjct: 56 KQEHGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIVTWNILIHGVIQR 115
Query: 137 ---------LGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICA 187
LG+ + LF D+ + + C+ + G Q+H +
Sbjct: 116 DGDTNHRAHLGFCYLSRILFTDV------SLDHVSFMGLIRLCTDSTNMKAGIQLHCLMV 169
Query: 188 KFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAIS 247
K GL + F SL Y KCG + A+ F + DLV WNA+++++ +G +EA
Sbjct: 170 KQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFG 229
Query: 248 IFRQMMHIG--LIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTM 305
+ + M D TF SLL AC + QG QIH+ + KV + ++ + +LL M
Sbjct: 230 LLKLMGSDKNRFRGDYFTFSSLLSACR----IEQGKQIHAILFKVSYQFDIPVATALLNM 285
Query: 306 YTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMIT 365
Y K ++L DA FE++ N+VSWNA++ Q+ + E RLF QML +P+ +T
Sbjct: 286 YAKSNHLSDARECFESMVVR-NVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELT 344
Query: 366 ITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTE 425
++L +CA+ +++ QV K G +SV+N LI Y++ G++ A F S
Sbjct: 345 FASVLSSCAKFSAIWEIKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSIR 404
Query: 426 NPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWN 485
P+++SW+S+I A G E+L +F M ++P+++T++ VLSACSH GLV+EG
Sbjct: 405 EPDLVSWTSVIGALASHGFAEESLQMFESMLQ-KLQPDKITFLEVLSACSHGGLVQEGLR 463
Query: 486 LYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTLLSSCKTH 545
+ M E I EH++C++DLL RAG + EA + +P C H
Sbjct: 464 CFKRMTEFYKIEAEDEHYTCLIDLLGRAGFIDEASDVLNSMPTEPSTHALAAFTGGCNIH 523
Query: 546 GNVDIAERAAENILKLDPSNSAALVLLSSIHASAGNWEDVAKLRK 590
+ + A+ +L+++P+ +LS+ + S G+W A LRK
Sbjct: 524 EKRESMKWGAKKLLEIEPTKPVNYSILSNAYVSEGHWNQAALLRK 568
Score = 186 bits (472), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 125/431 (29%), Positives = 213/431 (49%), Gaps = 17/431 (3%)
Query: 2 YGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQ-NGQGNEAVVMYIQMLRSGFFPD--- 57
Y K DA ++FD M LRN+V+W +I G Q +G N + L F D
Sbjct: 81 YTKIREFDDADKLFDEMPLRNIVTWNILIHGVIQRDGDTNHRAHLGFCYLSRILFTDVSL 140
Query: 58 -QLTFGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVF 116
++F +I+ C + ++ G QLH ++K G L+ Y G + A VF
Sbjct: 141 DHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQGLESSCFPSTSLVHFYGKCGLIVEARRVF 200
Query: 117 TMISIKDLISWSSMIRGFTQLGYEIEALYLFRDM-LRQGVYQPNEFVLGSVFSACSSLLE 175
+ +DL+ W++++ + G EA L + M + ++ + F S+ SAC
Sbjct: 201 EAVLDRDLVLWNALVSSYVLNGMIDEAFGLLKLMGSDKNRFRGDYFTFSSLLSAC----R 256
Query: 176 PEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAA 235
E G+QIH I K ++ +L +MYAK L A+ F + ++VSWNA+I
Sbjct: 257 IEQGKQIHAILFKVSYQFDIPVATALLNMYAKSNHLSDARECFESMVVRNVVSWNAMIVG 316
Query: 236 FADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKE 295
FA +G+ EA+ +F QM+ L PD +TF S+L +C A+ + Q+ + + K G
Sbjct: 317 FAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQVQAMVTKKGSADF 376
Query: 296 VALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQML 355
+++ NSL++ Y++ NL +AL F +I + +LVSW +++ A H A E+ ++F+ ML
Sbjct: 377 LSVANSLISSYSRNGNLSEALLCFHSI-REPDLVSWTSVIGALASHGFAEESLQMFESML 435
Query: 356 FSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKS---GLVLDVSVSNGLIDMYAKCG 412
+ +P+ IT +L C+ ++ G + CF + + + LID+ + G
Sbjct: 436 -QKLQPDKITFLEVLSACSHGGLVQEG--LRCFKRMTEFYKIEAEDEHYTCLIDLLGRAG 492
Query: 413 SVIHAQRVFDS 423
+ A V +S
Sbjct: 493 FIDEASDVLNS 503
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 84/252 (33%), Positives = 125/252 (49%), Gaps = 32/252 (12%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
MY K + DAR+ F++M +RNVVSW +MI G++QNG+G EA+ ++ QML PD+LT
Sbjct: 285 MYAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELT 344
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMIS 120
F S++ +C I+ +Q+ A V K G L N LIS Y+ G ++ A F I
Sbjct: 345 FASVLSSCAKFSAIWEIKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSIR 404
Query: 121 IKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGR 180
DL+SW+S+I G+ E+L +F ML++ QP++ V SACS
Sbjct: 405 EPDLVSWTSVIGALASHGFAEESLQMFESMLQK--LQPDKITFLEVLSACS--------- 453
Query: 181 QIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSG 240
HG + GL +C T FY+IE+ D + +I +G
Sbjct: 454 --HGGLVQEGL---------------RCF---KRMTEFYKIEAED-EHYTCLIDLLGRAG 492
Query: 241 DANEAISIFRQM 252
+EA + M
Sbjct: 493 FIDEASDVLNSM 504
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 77/183 (42%), Gaps = 7/183 (3%)
Query: 374 AELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWS 433
A L L Q H F VK G+ + + N L+ Y K A ++FD N+++W+
Sbjct: 47 ASLDHLSDVKQEHGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIVTWN 106
Query: 434 SLIVGYAMSG-----LGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYN 488
LI G H ++ V + V+++G++ C+ ++ G L+
Sbjct: 107 ILIHGVIQRDGDTNHRAHLGFCYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQLHC 166
Query: 489 TMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTLLSSCKTHGNV 548
M ++ G+ + + +V + G + EA D D+ W L+SS +G +
Sbjct: 167 LMVKQ-GLESSCFPSTSLVHFYGKCGLIVEARRVFEAV-LDRDLVLWNALVSSYVLNGMI 224
Query: 549 DIA 551
D A
Sbjct: 225 DEA 227
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 266 bits (681), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 157/475 (33%), Positives = 248/475 (52%), Gaps = 58/475 (12%)
Query: 181 QIHGICAKFGLVRNVFSG------CSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIA 234
QIH + K G +R+ + C+ D++ + L A F Q+ + SWN II
Sbjct: 41 QIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRD--LDYAHKIFNQMPQRNCFSWNTIIR 98
Query: 235 AFADSGDANE--AISIFRQMMHIGLI-PDSITFLSLLCACTSPMALNQGMQIHSYIVKVG 291
F++S + AI++F +MM + P+ TF S+L AC + +G QIH +K G
Sbjct: 99 GFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLALKYG 158
Query: 292 FNKEVALYNSLLTMYTKCSNLHDALSVF--EAISKN------------------------ 325
F + + ++L+ MY C + DA +F I K+
Sbjct: 159 FGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGY 218
Query: 326 ------------------ANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITIT 367
++VSWN ++S + + +F++M + +PN +T+
Sbjct: 219 MRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLV 278
Query: 368 NLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENP 427
++L + L SLE+G +H ++ SG+ +D + + LIDMY+KCG + A VF+
Sbjct: 279 SVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRE 338
Query: 428 NVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLY 487
NVI+WS++I G+A+ G +A++ F KMR GVRP++V Y+ +L+ACSH GLVEEG +
Sbjct: 339 NVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYF 398
Query: 488 NTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTLLSSCKTHGN 547
+ M G+ P EH+ CMVDLL R+G L EAE FI PD WK LL +C+ GN
Sbjct: 399 SQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQGN 458
Query: 548 VDIAERAAENILKLDPSNSAALVLLSSIHASAGNWEDVAKLR---KVLDDGYDPA 599
V++ +R A ++ + P +S A V LS+++AS GNW +V+++R K D DP
Sbjct: 459 VEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRKDPG 513
Score = 159 bits (402), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 101/377 (26%), Positives = 176/377 (46%), Gaps = 50/377 (13%)
Query: 11 ARQVFDAMHLRNVVSWTSMISGYSQNGQGNE--AVVMYIQMLRSGFF-PDQLTFGSIIKA 67
A ++F+ M RN SW ++I G+S++ + A+ ++ +M+ F P++ TF S++KA
Sbjct: 78 AHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKA 137
Query: 68 CCIAGDIYLGRQLHAHVIKSGFGG------------------------------------ 91
C G I G+Q+H +K GFGG
Sbjct: 138 CAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVV 197
Query: 92 ---------HLVAQNGLISMYTNFGQVAHASDVFTMISIKDLISWSSMIRGFTQLGYEIE 142
+V N +I Y G A +F + + ++SW++MI G++ G+ +
Sbjct: 198 MTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKD 257
Query: 143 ALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFSGCSLC 202
A+ +FR+M ++G +PN L SV A S L E G +H G+ + G +L
Sbjct: 258 AVEVFREM-KKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALI 316
Query: 203 DMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSI 262
DMY+KCG + A F ++ ++++W+A+I FA G A +AI F +M G+ P +
Sbjct: 317 DMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDV 376
Query: 263 TFLSLLCACTSPMALNQGMQIHSYIVKV-GFNKEVALYNSLLTMYTKCSNLHDALSVFEA 321
+++LL AC+ + +G + S +V V G + Y ++ + + L +A
Sbjct: 377 AYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILN 436
Query: 322 ISKNANLVSWNAILSAC 338
+ + V W A+L AC
Sbjct: 437 MPIKPDDVIWKALLGAC 453
Score = 148 bits (374), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 104/433 (24%), Positives = 196/433 (45%), Gaps = 57/433 (13%)
Query: 79 QLHAHVIKSGFGGHLVAQNGLISMYT----NFGQVAHASDVFTMISIKDLISWSSMIRGF 134
Q+HA IKSG +A ++ + + +A +F + ++ SW+++IRGF
Sbjct: 41 QIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCFSWNTIIRGF 100
Query: 135 TQLGYE--IEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLV 192
++ + + A+ LF +M+ +PN F SV AC+ + + G+QIHG+ K+G
Sbjct: 101 SESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLALKYGFG 160
Query: 193 RNVFSGCSLCDMYAKCGFLPSAKTAFY--------------------------------- 219
+ F +L MY CGF+ A+ FY
Sbjct: 161 GDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMR 220
Query: 220 ------------QIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSL 267
++ +VSWN +I+ ++ +G +A+ +FR+M + P+ +T +S+
Sbjct: 221 LGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSV 280
Query: 268 LCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNAN 327
L A + +L G +H Y G + L ++L+ MY+KC + A+ VFE + + N
Sbjct: 281 LPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRE-N 339
Query: 328 LVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHC 387
+++W+A+++ H QAG+ F +M + +P+ + NLL C+ +E G +
Sbjct: 340 VITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFS 399
Query: 388 FSVK-SGLVLDVSVSNGLIDMYAKCGSVIHAQR-VFDSTENPNVISWSSLIVGYAMSG-- 443
V GL + ++D+ + G + A+ + + P+ + W +L+ M G
Sbjct: 400 QMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQGNV 459
Query: 444 -LGHEALNLFRKM 455
+G N+ M
Sbjct: 460 EMGKRVANILMDM 472
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 76/236 (32%), Positives = 120/236 (50%), Gaps = 3/236 (1%)
Query: 2 YGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTF 61
Y + G K AR +FD M R+VVSW +MISGYS NG +AV ++ +M + P+ +T
Sbjct: 218 YMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTL 277
Query: 62 GSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISI 121
S++ A G + LG LH + SG V + LI MY+ G + A VF +
Sbjct: 278 VSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPR 337
Query: 122 KDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQ 181
+++I+WS+MI GF G +A+ F M + GV +P++ ++ +ACS E GR+
Sbjct: 338 ENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGV-RPSDVAYINLLTACSHGGLVEEGRR 396
Query: 182 -IHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIE-SPDLVSWNAIIAA 235
+ + GL + + D+ + G L A+ + PD V W A++ A
Sbjct: 397 YFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGA 452
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 71/133 (53%), Gaps = 2/133 (1%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
MY KCG ++ A VF+ + NV++W++MI+G++ +GQ +A+ + +M ++G P +
Sbjct: 318 MYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVA 377
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIK-SGFGGHLVAQNGLISMYTNFGQVAHASDVFTMI 119
+ +++ AC G + GR+ + ++ G + ++ + G + A + +
Sbjct: 378 YINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNM 437
Query: 120 SIK-DLISWSSMI 131
IK D + W +++
Sbjct: 438 PIKPDDVIWKALL 450
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 266 bits (680), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 153/515 (29%), Positives = 272/515 (52%), Gaps = 12/515 (2%)
Query: 78 RQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIKDLISWSSMIRGFTQL 137
+QLHA +I+ L LIS + Q A VF + ++ +S+IR Q
Sbjct: 36 KQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHLCNSLIRAHAQN 95
Query: 138 GYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFS 197
+A ++F +M R G++ N F + ACS + +H K GL +++
Sbjct: 96 SQPYQAFFVFSEMQRFGLFADN-FTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDIYV 154
Query: 198 GCSLCDMYAKCGFL--PSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHI 255
+L D Y++CG L A F ++ D VSWN+++ +G+ +A +F +M
Sbjct: 155 PNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARRLFDEMPQ- 213
Query: 256 GLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDA 315
D I++ ++L +++ ++ + + + +++++ Y+K ++ A
Sbjct: 214 ---RDLISWNTMLDGYARCREMSKAFELFEKMPE----RNTVSWSTMVMGYSKAGDMEMA 266
Query: 316 LSVFEAISKNA-NLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCA 374
+F+ + A N+V+W I++ + E RL QM+ S K + + ++L C
Sbjct: 267 RVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACT 326
Query: 375 ELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSS 434
E L +G ++H +S L + V N L+DMYAKCG++ A VF+ +++SW++
Sbjct: 327 ESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNT 386
Query: 435 LIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEEL 494
++ G + G G EA+ LF +MR G+RP++VT++ VL +C+H GL++EG + + +ME+
Sbjct: 387 MLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVY 446
Query: 495 GIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTLLSSCKTHGNVDIAERA 554
+ P EH+ C+VDLL R G L EA ++ +P++ W LL +C+ H VDIA+
Sbjct: 447 DLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGACRMHNEVDIAKEV 506
Query: 555 AENILKLDPSNSAALVLLSSIHASAGNWEDVAKLR 589
+N++KLDP + LLS+I+A+A +WE VA +R
Sbjct: 507 LDNLVKLDPCDPGNYSLLSNIYAAAEDWEGVADIR 541
Score = 181 bits (458), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 127/440 (28%), Positives = 209/440 (47%), Gaps = 20/440 (4%)
Query: 5 CGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTFGSI 64
C A +VF+ + NV S+I ++QN Q +A ++ +M R G F D T+ +
Sbjct: 64 CRQTNLAVRVFNQVQEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFL 123
Query: 65 IKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFG--QVAHASDVFTMISIK 122
+KAC + + + +H H+ K G + N LI Y+ G V A +F +S +
Sbjct: 124 LKACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSER 183
Query: 123 DLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQI 182
D +SW+SM+ G + G +A LF +M ++ + N + G ++ C R++
Sbjct: 184 DTVSWNSMLGGLVKAGELRDARRLFDEMPQRDLISWNTMLDG--YARC---------REM 232
Query: 183 HGICAKFGLV--RNVFSGCSLCDMYAKCGFLPSAKTAFYQIESP--DLVSWNAIIAAFAD 238
F + RN S ++ Y+K G + A+ F ++ P ++V+W IIA +A+
Sbjct: 233 SKAFELFEKMPERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAE 292
Query: 239 SGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVAL 298
G EA + QM+ GL D+ +S+L ACT L+ GM+IHS + + +
Sbjct: 293 KGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYV 352
Query: 299 YNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSE 358
N+LL MY KC NL A VF I K +LVSWN +L H E LF +M
Sbjct: 353 LNALLDMYAKCGNLKKAFDVFNDIPKK-DLVSWNTMLHGLGVHGHGKEAIELFSRMRREG 411
Query: 359 NKPNMITITNLLGTCAELASLEVG-NQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHA 417
+P+ +T +L +C ++ G + + LV V L+D+ + G + A
Sbjct: 412 IRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEA 471
Query: 418 QRVFDSTE-NPNVISWSSLI 436
+V + PNV+ W +L+
Sbjct: 472 IKVVQTMPMEPNVVIWGALL 491
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/238 (33%), Positives = 124/238 (52%), Gaps = 5/238 (2%)
Query: 2 YGKCGSMKDARQVFDAMHL--RNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQL 59
Y K G M+ AR +FD M L +NVV+WT +I+GY++ G EA + QM+ SG D
Sbjct: 257 YSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAA 316
Query: 60 TFGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMI 119
SI+ AC +G + LG ++H+ + +S G + N L+ MY G + A DVF I
Sbjct: 317 AVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDI 376
Query: 120 SIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSL-LEPEY 178
KDL+SW++M+ G G+ EA+ LF M R+G+ +P++ +V +C+ L E
Sbjct: 377 PKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGI-RPDKVTFIAVLCSCNHAGLIDEG 435
Query: 179 GRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSA-KTAFYQIESPDLVSWNAIIAA 235
+ + + LV V L D+ + G L A K P++V W A++ A
Sbjct: 436 IDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGA 493
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 139/292 (47%), Gaps = 25/292 (8%)
Query: 277 LNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILS 336
LNQ Q+H+ I++ ++++ + L++ + C + A+ VF + + N+ N+++
Sbjct: 32 LNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQV-QEPNVHLCNSLIR 90
Query: 337 ACLQHKQAGETFRLFKQM----LFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKS 392
A Q+ Q + F +F +M LF++N T LL C+ + L V +H K
Sbjct: 91 AHAQNSQPYQAFFVFSEMQRFGLFADN----FTYPFLLKACSGQSWLPVVKMMHNHIEKL 146
Query: 393 GLVLDVSVSNGLIDMYAKCG--SVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALN 450
GL D+ V N LID Y++CG V A ++F+ + +SW+S++ G +G +A
Sbjct: 147 GLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARR 206
Query: 451 LFRKM--RNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVD 508
LF +M R+L +++ +L + + + + L+ M E + +S MV
Sbjct: 207 LFDEMPQRDL------ISWNTMLDGYARCREMSKAFELFEKMPERNTV-----SWSTMVM 255
Query: 509 LLARAGCLYEAETFIRKTGFD-PDITTWKTLLSSCKTHGNVDIAERAAENIL 559
++AG + A K ++ TW +++ G + A+R + ++
Sbjct: 256 GYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMV 307
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 50/77 (64%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
MY KCG++K A VF+ + +++VSW +M+ G +G G EA+ ++ +M R G PD++T
Sbjct: 359 MYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVT 418
Query: 61 FGSIIKACCIAGDIYLG 77
F +++ +C AG I G
Sbjct: 419 FIAVLCSCNHAGLIDEG 435
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 90/195 (46%), Gaps = 7/195 (3%)
Query: 370 LGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNV 429
L CA L ++ Q+H ++ L D+ ++ LI + C A RVF+ + PNV
Sbjct: 26 LPKCANLNQVK---QLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNV 82
Query: 430 ISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNT 489
+SLI +A + ++A +F +M+ G+ + TY +L ACS + ++N
Sbjct: 83 HLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNH 142
Query: 490 MEEELGIPPAREHFSCMVDLLARAGCL--YEAETFIRKTGFDPDITTWKTLLSSCKTHGN 547
+ E+LG+ + ++D +R G L +A K + D +W ++L G
Sbjct: 143 I-EKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMS-ERDTVSWNSMLGGLVKAGE 200
Query: 548 VDIAERAAENILKLD 562
+ A R + + + D
Sbjct: 201 LRDARRLFDEMPQRD 215
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 266 bits (679), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 140/432 (32%), Positives = 227/432 (52%), Gaps = 31/432 (7%)
Query: 192 VRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQ 251
+RN++S ++ Y K G L A+ F + D+VSWN ++ +A G+ +EA+ +++
Sbjct: 110 LRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKE 169
Query: 252 MMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSN 311
G+ + +F LL AC L Q H ++ GF V L S++ Y KC
Sbjct: 170 FRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQ 229
Query: 312 LHDALSVFEAIS------------------------------KNANLVSWNAILSACLQH 341
+ A F+ ++ N VSW A+++ ++
Sbjct: 230 MESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQ 289
Query: 342 KQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVS 401
LF++M+ KP T ++ L A +ASL G ++H + +++ + + V
Sbjct: 290 GSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVI 349
Query: 402 NGLIDMYAKCGSVIHAQRVFDSTENP-NVISWSSLIVGYAMSGLGHEALNLFRKMRNLGV 460
+ LIDMY+K GS+ ++RVF ++ + + W+++I A GLGH+AL + M V
Sbjct: 350 SSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRV 409
Query: 461 RPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAE 520
+PN T V +L+ACSH GLVEEG + +M + GI P +EH++C++DLL RAGC E
Sbjct: 410 QPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELM 469
Query: 521 TFIRKTGFDPDITTWKTLLSSCKTHGNVDIAERAAENILKLDPSNSAALVLLSSIHASAG 580
I + F+PD W +L C+ HGN ++ ++AA+ ++KLDP +SA +LLSSI+A G
Sbjct: 470 RKIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAADELIKLDPESSAPYILLSSIYADHG 529
Query: 581 NWEDVAKLRKVL 592
WE V KLR V+
Sbjct: 530 KWELVEKLRGVM 541
Score = 176 bits (447), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 119/481 (24%), Positives = 207/481 (43%), Gaps = 66/481 (13%)
Query: 21 RNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTFGSIIKACCIAGDIYLGRQL 80
R + S +S ++ + ++AV + + G S+++ C + G+ +
Sbjct: 9 RPICVAQSFLSKHATKAELSQAVSRLESLTQQGIRLPFDLLASLLQQCGDTKSLKQGKWI 68
Query: 81 HAHVIKSGFG-GHLVAQNGLISMYTNFGQVAHASDVFTMISIKDLISWSSMIRGFTQLGY 139
H H+ +GF + + N LI MY G+ A VF + +++L SW++M+ G+ + G
Sbjct: 69 HRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGM 128
Query: 140 EI-------------------------------EALYLFRDMLRQGVYQPNEFVLGSVFS 168
+ EAL+ +++ R G+ + NEF + +
Sbjct: 129 LVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGI-KFNEFSFAGLLT 187
Query: 169 ACSSLLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDL-- 226
AC + + RQ HG G + NV CS+ D YAKCG + SAK F ++ D+
Sbjct: 188 ACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHI 247
Query: 227 -----------------------------VSWNAIIAAFADSGDANEAISIFRQMMHIGL 257
VSW A+IA + G N A+ +FR+M+ +G+
Sbjct: 248 WTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGV 307
Query: 258 IPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALS 317
P+ TF S LCA S +L G +IH Y+++ + +SL+ MY+K +L +
Sbjct: 308 KPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASER 367
Query: 318 VFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELA 377
VF + V WN ++SA QH + R+ M+ +PN T+ +L C+
Sbjct: 368 VFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSG 427
Query: 378 SLEVG-NQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTE-NPNVISWSSL 435
+E G +V+ G+V D LID+ + G R + P+ W+++
Sbjct: 428 LVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMPFEPDKHIWNAI 487
Query: 436 I 436
+
Sbjct: 488 L 488
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 105/373 (28%), Positives = 178/373 (47%), Gaps = 34/373 (9%)
Query: 2 YGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTF 61
Y K G + AR VFD+M R+VVSW +M+ GY+Q+G +EA+ Y + RSG ++ +F
Sbjct: 123 YVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSF 182
Query: 62 GSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISI 121
++ AC + + L RQ H V+ +GF ++V +I Y GQ+ A F +++
Sbjct: 183 AGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTV 242
Query: 122 KDL-------------------------------ISWSSMIRGFTQLGYEIEALYLFRDM 150
KD+ +SW+++I G+ + G AL LFR M
Sbjct: 243 KDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKM 302
Query: 151 LRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGF 210
+ GV +P +F S A +S+ +G++IHG + + N SL DMY+K G
Sbjct: 303 IALGV-KPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGS 361
Query: 211 LPSAKTAFYQIESP-DLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLC 269
L +++ F + D V WN +I+A A G ++A+ + M+ + P+ T + +L
Sbjct: 362 LEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILN 421
Query: 270 ACTSPMALNQGMQ-IHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANL 328
AC+ + +G++ S V+ G + Y L+ + + + + E + +
Sbjct: 422 ACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMPFEPDK 481
Query: 329 VSWNAILSACLQH 341
WNAIL C H
Sbjct: 482 HIWNAILGVCRIH 494
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 124/283 (43%), Gaps = 68/283 (24%)
Query: 366 ITNLLGTCAELASLEVGNQVHCFSVKSGLVL-DVSVSNGLIDMYAKCGS----------- 413
+ +LL C + SL+ G +H +G + +SN LI MY KCG
Sbjct: 49 LASLLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQM 108
Query: 414 --------------------VIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFR 453
++ A+ VFDS +V+SW+++++GYA G HEAL ++
Sbjct: 109 HLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYK 168
Query: 454 KMRNLGVRPNEVTYVGVLSAC-----------SHIGLVEEGWNLYNTMEEELGIPPAREH 502
+ R G++ NE ++ G+L+AC +H ++ G+ L N +
Sbjct: 169 EFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGF-LSNVV------------ 215
Query: 503 FSC-MVDLLARAGCLYEAETFIRKTGFD----PDITTWKTLLSSCKTHGNVDIAERAAEN 557
SC ++D A+ G + A K FD DI W TL+S G+++ AE+
Sbjct: 216 LSCSIIDAYAKCGQMESA-----KRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCE 270
Query: 558 ILKLDPSNSAALVLLSSIHASAGNWEDVAKLRKVLDDGYDPAQ 600
+ + +P + AL+ + +GN + RK++ G P Q
Sbjct: 271 MPEKNPVSWTALI-AGYVRQGSGN-RALDLFRKMIALGVKPEQ 311
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 265 bits (676), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 143/446 (32%), Positives = 252/446 (56%), Gaps = 10/446 (2%)
Query: 152 RQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFL 211
++G+ + S+ C SL ++G ++H + + L N+ L +YA CG+
Sbjct: 84 QKGISLTEPEIFASLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYA 143
Query: 212 PSAKTAFYQIESPD--LVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLC 269
A F ++ D +WN++I+ +A+ G +A++++ QM G+ PD TF +L
Sbjct: 144 EVAHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLK 203
Query: 270 ACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLV 329
AC ++ G IH +VK GF +V + N+L+ MY KC ++ A +VF+ I + + V
Sbjct: 204 ACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIP-HKDYV 262
Query: 330 SWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFS 389
SWN++L+ L H E +F+ M+ + +P+ + I+++L A + S + G Q+H +
Sbjct: 263 SWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVL---ARVLSFKHGRQLHGWV 319
Query: 390 VKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEAL 449
++ G+ ++SV+N LI +Y+K G + A +FD + +SW+++I ++ + G L
Sbjct: 320 IRRGMEWELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISAHSKNSNG---L 376
Query: 450 NLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDL 509
F +M +P+ +T+V VLS C++ G+VE+G L++ M +E GI P EH++CMV+L
Sbjct: 377 KYFEQMHRANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNL 436
Query: 510 LARAGCLYEAETFI-RKTGFDPDITTWKTLLSSCKTHGNVDIAERAAENILKLDPSNSAA 568
RAG + EA + I ++ G + T W LL +C HGN DI E AA+ + +L+P N
Sbjct: 437 YGRAGMMEEAYSMIVQEMGLEAGPTVWGALLYACYLHGNTDIGEVAAQRLFELEPDNEHN 496
Query: 569 LVLLSSIHASAGNWEDVAKLRKVLDD 594
LL I++ A EDV ++R+++ D
Sbjct: 497 FELLIRIYSKAKRAEDVERVRQMMVD 522
Score = 196 bits (499), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 124/393 (31%), Positives = 202/393 (51%), Gaps = 17/393 (4%)
Query: 1 MYGKCGSMKDARQVFDAMHLRN--VVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQ 58
+Y CG + A +VFD M R+ +W S+ISGY++ GQ +A+ +Y QM G PD+
Sbjct: 136 LYASCGYAEVAHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDR 195
Query: 59 LTFGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTM 118
TF ++KAC G + +G +H ++K GFG + N L+ MY G + A +VF M
Sbjct: 196 FTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDM 255
Query: 119 ISIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEY 178
I KD +SW+SM+ G+ G EAL +FR M++ G+ +P++ + SV + S ++
Sbjct: 256 IPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGI-EPDKVAISSVLARVLSF---KH 311
Query: 179 GRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFAD 238
GRQ+HG + G+ + +L +Y+K G L A F Q+ D VSWNAII+A +
Sbjct: 312 GRQLHGWVIRRGMEWELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISAHSK 371
Query: 239 SGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVK-VGFNKEVA 297
+ + + F QM PD ITF+S+L C + + G ++ S + K G + ++
Sbjct: 372 NSN---GLKYFEQMHRANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKME 428
Query: 298 LYNSLLTMYTKCSNLHDALS-VFEAISKNANLVSWNAILSACLQHKQA--GETF--RLFK 352
Y ++ +Y + + +A S + + + A W A+L AC H GE RLF+
Sbjct: 429 HYACMVNLYGRAGMMEEAYSMIVQEMGLEAGPTVWGALLYACYLHGNTDIGEVAAQRLFE 488
Query: 353 QMLFSENKPNMITITNLLGTCAELASLEVGNQV 385
L +N+ N + + +E Q+
Sbjct: 489 --LEPDNEHNFELLIRIYSKAKRAEDVERVRQM 519
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 265 bits (676), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 160/523 (30%), Positives = 264/523 (50%), Gaps = 9/523 (1%)
Query: 78 RQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIKDLISWSSMIRGFTQL 137
++LH+ V KS L Y + A +F + + + W+S+IR + +
Sbjct: 25 QKLHSFVTKSKLARDPYFATQLARFYALNDDLISARKLFDVFPERSVFLWNSIIRAYAKA 84
Query: 138 GYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFS 197
L LF +LR +P+ F + S + + R IHGI GL +
Sbjct: 85 HQFTTVLSLFSQILRSDT-RPDNFTYACLARGFSESFDTKGLRCIHGIAIVSGLGFDQIC 143
Query: 198 GCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGL 257
G ++ Y+K G + A F I PDL WN +I + G ++ I++F M H G
Sbjct: 144 GSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQHRGH 203
Query: 258 IPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALS 317
P+ T ++L P L +H++ +K+ + + +L+ MY++C + A S
Sbjct: 204 QPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIASACS 263
Query: 318 VFEAISKNANLVSWNAIL---SACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCA 374
VF +IS+ +LV+ ++++ S C HK+A LF ++ S KP+ + + +LG+CA
Sbjct: 264 VFNSISE-PDLVACSSLITGYSRCGNHKEA---LHLFAELRMSGKKPDCVLVAIVLGSCA 319
Query: 375 ELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSS 434
EL+ G +VH + ++ GL LD+ V + LIDMY+KCG + A +F N++S++S
Sbjct: 320 ELSDSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSFNS 379
Query: 435 LIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEEL 494
LI+G + G A F ++ +G+ P+E+T+ +L C H GL+ +G ++ M+ E
Sbjct: 380 LILGLGLHGFASTAFEKFTEILEMGLIPDEITFSALLCTCCHSGLLNKGQEIFERMKSEF 439
Query: 495 GIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTLLSSCKTHGNVDIAERA 554
GI P EH+ MV L+ AG L EA F+ D LLS C+ H N +AE
Sbjct: 440 GIEPQTEHYVYMVKLMGMAGKLEEAFEFVMSLQKPIDSGILGALLSCCEVHENTHLAEVV 499
Query: 555 AENILKL-DPSNSAALVLLSSIHASAGNWEDVAKLRKVLDDGY 596
AENI K + S V+LS+++A G W++V +LR + + Y
Sbjct: 500 AENIHKNGEERRSVYKVMLSNVYARYGRWDEVERLRDGISESY 542
Score = 181 bits (458), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 109/378 (28%), Positives = 194/378 (51%), Gaps = 8/378 (2%)
Query: 11 ARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTFGSIIKACCI 70
AR++FD R+V W S+I Y++ Q + ++ Q+LRS PD T+ + +
Sbjct: 59 ARKLFDVFPERSVFLWNSIIRAYAKAHQFTTVLSLFSQILRSDTRPDNFTYACLARGFSE 118
Query: 71 AGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIKDLISWSSM 130
+ D R +H I SG G + + ++ Y+ G + AS +F I DL W+ M
Sbjct: 119 SFDTKGLRCIHGIAIVSGLGFDQICGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVM 178
Query: 131 IRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEY---GRQIHGICA 187
I G+ G+ + + LF M +G +QPN + + ++ S L++P +H C
Sbjct: 179 ILGYGCCGFWDKGINLFNLMQHRG-HQPNCYTMVALTSG---LIDPSLLLVAWSVHAFCL 234
Query: 188 KFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAIS 247
K L + + GC+L +MY++C + SA + F I PDLV+ +++I ++ G+ EA+
Sbjct: 235 KINLDSHSYVGCALVNMYSRCMCIASACSVFNSISEPDLVACSSLITGYSRCGNHKEALH 294
Query: 248 IFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYT 307
+F ++ G PD + +L +C G ++HSY++++G ++ + ++L+ MY+
Sbjct: 295 LFAELRMSGKKPDCVLVAIVLGSCAELSDSVSGKEVHSYVIRLGLELDIKVCSALIDMYS 354
Query: 308 KCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITIT 367
KC L A+S+F I + N+VS+N+++ H A F F ++L P+ IT +
Sbjct: 355 KCGLLKCAMSLFAGIPEK-NIVSFNSLILGLGLHGFASTAFEKFTEILEMGLIPDEITFS 413
Query: 368 NLLGTCAELASLEVGNQV 385
LL TC L G ++
Sbjct: 414 ALLCTCCHSGLLNKGQEI 431
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 95/342 (27%), Positives = 168/342 (49%), Gaps = 2/342 (0%)
Query: 2 YGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTF 61
Y K G + +A ++F ++ ++ W MI GY G ++ + ++ M G P+ T
Sbjct: 151 YSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQHRGHQPNCYTM 210
Query: 62 GSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISI 121
++ + + +HA +K H L++MY+ +A A VF IS
Sbjct: 211 VALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIASACSVFNSISE 270
Query: 122 KDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQ 181
DL++ SS+I G+++ G EAL+LF + LR +P+ ++ V +C+ L + G++
Sbjct: 271 PDLVACSSLITGYSRCGNHKEALHLFAE-LRMSGKKPDCVLVAIVLGSCAELSDSVSGKE 329
Query: 182 IHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGD 241
+H + GL ++ +L DMY+KCG L A + F I ++VS+N++I G
Sbjct: 330 VHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSFNSLILGLGLHGF 389
Query: 242 ANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYI-VKVGFNKEVALYN 300
A+ A F +++ +GLIPD ITF +LLC C LN+G +I + + G + Y
Sbjct: 390 ASTAFEKFTEILEMGLIPDEITFSALLCTCCHSGLLNKGQEIFERMKSEFGIEPQTEHYV 449
Query: 301 SLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHK 342
++ + L +A ++ K + A+LS C H+
Sbjct: 450 YMVKLMGMAGKLEEAFEFVMSLQKPIDSGILGALLSCCEVHE 491
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 92/170 (54%), Gaps = 1/170 (0%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
MY +C + A VF+++ ++V+ +S+I+GYS+ G EA+ ++ ++ SG PD +
Sbjct: 251 MYSRCMCIASACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVL 310
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMIS 120
++ +C D G+++H++VI+ G + + LI MY+ G + A +F I
Sbjct: 311 VAIVLGSCAELSDSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIP 370
Query: 121 IKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSAC 170
K+++S++S+I G G+ A F ++L G+ P+E ++ C
Sbjct: 371 EKNIVSFNSLILGLGLHGFASTAFEKFTEILEMGLI-PDEITFSALLCTC 419
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
MY KCG +K A +F + +N+VS+ S+I G +G + A + ++L G PD++T
Sbjct: 352 MYSKCGLLKCAMSLFAGIPEKNIVSFNSLILGLGLHGFASTAFEKFTEILEMGLIPDEIT 411
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSGFG 90
F +++ CC +G + G+++ +KS FG
Sbjct: 412 FSALLCTCCHSGLLNKGQEIFER-MKSEFG 440
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 264 bits (674), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 142/430 (33%), Positives = 243/430 (56%), Gaps = 5/430 (1%)
Query: 162 VLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQI 221
+L + A SS +P+ ++IH I + G L + G + A+ F ++
Sbjct: 12 MLSELLRASSS--KPKQLKKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEM 69
Query: 222 ESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGM 281
P + WN + + + E++ ++++M +G+ PD T+ ++ A + + G
Sbjct: 70 HKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGF 129
Query: 282 QIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQH 341
+H+++VK GF + L+ MY K L A +FE++ + +LV+WNA L+ C+Q
Sbjct: 130 ALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESM-QVKDLVAWNAFLAVCVQT 188
Query: 342 KQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVS 401
+ F +M + + T+ ++L C +L SLE+G +++ + K + ++ V
Sbjct: 189 GNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVE 248
Query: 402 NGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVR 461
N +DM+ KCG+ A+ +F+ + NV+SWS++IVGYAM+G EAL LF M+N G+R
Sbjct: 249 NARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLR 308
Query: 462 PNEVTYVGVLSACSHIGLVEEGWNLYNTMEE--ELGIPPAREHFSCMVDLLARAGCLYEA 519
PN VT++GVLSACSH GLV EG ++ M + + + P +EH++CMVDLL R+G L EA
Sbjct: 309 PNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEA 368
Query: 520 ETFIRKTGFDPDITTWKTLLSSCKTHGNVDIAERAAENILKLDPSNSAALVLLSSIHASA 579
FI+K +PD W LL +C H ++ + ++ A+ +++ P + VLLS+I+A+A
Sbjct: 369 YEFIKKMPVEPDTGIWGALLGACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAA 428
Query: 580 GNWEDVAKLR 589
G W+ V K+R
Sbjct: 429 GKWDCVDKVR 438
Score = 184 bits (466), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 105/340 (30%), Positives = 176/340 (51%), Gaps = 4/340 (1%)
Query: 6 GSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTFGSII 65
G M ARQVFD MH + W ++ GY +N E++++Y +M G PD+ T+ ++
Sbjct: 57 GDMCYARQVFDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVV 116
Query: 66 KACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIKDLI 125
KA GD G LHAHV+K GFG + L+ MY FG+++ A +F + +KDL+
Sbjct: 117 KAISQLGDFSCGFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLV 176
Query: 126 SWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGI 185
+W++ + Q G AL F M V Q + F + S+ SAC L E G +I+
Sbjct: 177 AWNAFLAVCVQTGNSAIALEYFNKMCADAV-QFDSFTVVSMLSACGQLGSLEIGEEIYDR 235
Query: 186 CAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEA 245
K + N+ + DM+ KCG +A+ F +++ ++VSW+ +I +A +GD+ EA
Sbjct: 236 ARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREA 295
Query: 246 ISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVK---VGFNKEVALYNSL 302
+++F M + GL P+ +TFL +L AC+ +N+G + S +V+ Y +
Sbjct: 296 LTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACM 355
Query: 303 LTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHK 342
+ + + L +A + + + W A+L AC H+
Sbjct: 356 VDLLGRSGLLEEAYEFIKKMPVEPDTGIWGALLGACAVHR 395
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 100/398 (25%), Positives = 170/398 (42%), Gaps = 33/398 (8%)
Query: 78 RQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIKDLISWSSMIRGFTQL 137
+++HA V+++GF L+ G + +A VF + + W+++ +G+ +
Sbjct: 28 KKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRN 87
Query: 138 GYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFS 197
E+L L++ M GV +P+EF V A S L + G +H K+G
Sbjct: 88 QLPFESLLLYKKMRDLGV-RPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIV 146
Query: 198 GCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGL 257
L MY K G L SA+ F ++ DLV+WNA +A +G++ A+ F +M +
Sbjct: 147 ATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAV 206
Query: 258 IPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALS 317
DS T +S+L AC +L G +I+ K + + + N+ L M+ KC N A
Sbjct: 207 QFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARV 266
Query: 318 VFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELA 377
+FE + K N+VSW+ ++ + + E LF M +PN +T +L C+
Sbjct: 267 LFEEM-KQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAG 325
Query: 378 SLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIV 437
+ G + V+S D P ++ ++
Sbjct: 326 LVNEGKRYFSLMVQSN----------------------------DKNLEPRKEHYACMVD 357
Query: 438 GYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACS 475
SGL EA +KM V P+ + +L AC+
Sbjct: 358 LLGRSGLLEEAYEFIKKM---PVEPDTGIWGALLGACA 392
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 111/246 (45%), Gaps = 7/246 (2%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
MY K G + A +F++M ++++V+W + ++ Q G A+ + +M D T
Sbjct: 153 MYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFT 212
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMIS 120
S++ AC G + +G +++ K +++ +N + M+ G A +F +
Sbjct: 213 VVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMK 272
Query: 121 IKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGR 180
++++SWS+MI G+ G EAL LF M +G+ +PN V SACS G+
Sbjct: 273 QRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGL-RPNYVTFLGVLSACSHAGLVNEGK 331
Query: 181 QIHGICAKFG----LVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIE-SPDLVSWNAIIAA 235
+ + + R C + D+ + G L A ++ PD W A++ A
Sbjct: 332 RYFSLMVQSNDKNLEPRKEHYAC-MVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGALLGA 390
Query: 236 FADSGD 241
A D
Sbjct: 391 CAVHRD 396
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 263 bits (672), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 183/625 (29%), Positives = 316/625 (50%), Gaps = 56/625 (8%)
Query: 4 KCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTFGS 63
+ G + +AR +F+ + RN V+W +MISGY + + N+A ++ M + D +T+ +
Sbjct: 52 RSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKR----DVVTWNT 107
Query: 64 IIKACCIAGDIYL---GRQLHAHVI-KSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMI 119
+I G I R+L + + F + N +IS Y ++ A +F +
Sbjct: 108 MISGYVSCGGIRFLEEARKLFDEMPSRDSF-----SWNTMISGYAKNRRIGEALLLFEKM 162
Query: 120 SIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYG 179
++ +SWS+MI GF Q G A+ LFR M + V G L++ E
Sbjct: 163 PERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSPLCALVAG--------LIKNERL 214
Query: 180 RQIHGICAKFGLVRN-----VFSGCSLCDMYAKCGFLPSAKTAFYQIESPDL-------- 226
+ + ++G + + V++ +L Y + G + +A+ F QI PDL
Sbjct: 215 SEAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQI--PDLCGDDHGGE 272
Query: 227 ---------VSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMAL 277
VSWN++I A+ GD A +F QM D+I++ +++ +
Sbjct: 273 FRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKD----RDTISWNTMIDGYVHVSRM 328
Query: 278 NQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSA 337
+ S + N++ +N +++ Y N+ A FE + + VSWN+I++A
Sbjct: 329 EDAFALFSEMP----NRDAHSWNMMVSGYASVGNVELARHYFEK-TPEKHTVSWNSIIAA 383
Query: 338 CLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLD 397
++K E LF +M KP+ T+T+LL L +L +G Q+H VK+ ++ D
Sbjct: 384 YEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKT-VIPD 442
Query: 398 VSVSNGLIDMYAKCGSVIHAQRVFDSTE-NPNVISWSSLIVGYAMSGLGHEALNLFRKMR 456
V V N LI MY++CG ++ ++R+FD + VI+W+++I GYA G EALNLF M+
Sbjct: 443 VPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHGNASEALNLFGSMK 502
Query: 457 NLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCL 516
+ G+ P+ +T+V VL+AC+H GLV+E + +M I P EH+S +V++ + G
Sbjct: 503 SNGIYPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQF 562
Query: 517 YEAETFIRKTGFDPDITTWKTLLSSCKTHGNVDIAERAAENILKLDPSNSAALVLLSSIH 576
EA I F+PD T W LL +C+ + NV +A AAE + +L+P +S VLL +++
Sbjct: 563 EEAMYIITSMPFEPDKTVWGALLDACRIYNNVGLAHVAAEAMSRLEPESSTPYVLLYNMY 622
Query: 577 ASAGNWEDVAKLRKVLDDGYDPAQR 601
A G W++ +++R ++ +R
Sbjct: 623 ADMGLWDEASQVRMNMESKRIKKER 647
Score = 156 bits (394), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 137/515 (26%), Positives = 232/515 (45%), Gaps = 42/515 (8%)
Query: 2 YGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTF 61
Y K + +A +F+ M RN VSW++MI+G+ QNG+ + AVV++ +M P
Sbjct: 146 YAKNRRIGEALLLFEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSPLCALV 205
Query: 62 GSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMIS- 120
+IK ++ ++ Q + V SG + A N LI Y GQV A +F I
Sbjct: 206 AGLIKNERLSEAAWVLGQYGSLV--SGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPD 263
Query: 121 --------------IKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSV 166
K+++SW+SMI+ + ++G + A LF M + N + G V
Sbjct: 264 LCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYV 323
Query: 167 FSACSSLLEPEYGRQIHGICAKFGLV--RNVFSGCSLCDMYAKCGFLPSAKTAFYQIESP 224
+ ++ A F + R+ S + YA G + A+ F +
Sbjct: 324 HVS-----------RMEDAFALFSEMPNRDAHSWNMMVSGYASVGNVELARHYFEKTPEK 372
Query: 225 DLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIH 284
VSWN+IIAA+ + D EA+ +F +M G PD T SLL A T + L GMQ+H
Sbjct: 373 HTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMH 432
Query: 285 SYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQA 344
+VK +V ++N+L+TMY++C + ++ +F+ + +++WNA++ H A
Sbjct: 433 QIVVKTVI-PDVPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHGNA 491
Query: 345 GETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSN-- 402
E LF M + P+ IT ++L CA A L + S+ S ++ + +
Sbjct: 492 SEALNLFGSMKSNGIYPSHITFVSVLNACAH-AGLVDEAKAQFVSMMSVYKIEPQMEHYS 550
Query: 403 GLIDMYAKCGSVIHAQRVFDSTE-NPNVISWSSLIVG---YAMSGLGHEALNLFRKMRNL 458
L+++ + G A + S P+ W +L+ Y GL H A ++
Sbjct: 551 SLVNVTSGQGQFEEAMYIITSMPFEPDKTVWGALLDACRIYNNVGLAHVAAEAMSRLEPE 610
Query: 459 GVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEE 493
P YV + + + +GL +E + ME +
Sbjct: 611 SSTP----YVLLYNMYADMGLWDEASQVRMNMESK 641
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 110/478 (23%), Positives = 212/478 (44%), Gaps = 46/478 (9%)
Query: 95 AQNGLISMYTNFGQVAHASDVFTMISIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQG 154
A N ++ G +A A D+F + ++ ++W++MI G+ + +A LF M ++
Sbjct: 42 ATNKELNQMIRSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKRD 101
Query: 155 VYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSA 214
V N + G V +C + E R++ R+ FS ++ YAK + A
Sbjct: 102 VVTWNTMISGYV--SCGGIRFLEEARKLFDEMPS----RDSFSWNTMISGYAKNRRIGEA 155
Query: 215 KTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSP 274
F ++ + VSW+A+I F +G+ + A+ +FR+M + DS S LCA +
Sbjct: 156 LLLFEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKM----PVKDS----SPLCALVAG 207
Query: 275 MALNQGMQIHSYIVK------VGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISK---- 324
+ N+ + ++++ G V YN+L+ Y + + A +F+ I
Sbjct: 208 LIKNERLSEAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGD 267
Query: 325 ----------NANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCA 374
N+VSWN+++ A L+ LF QM + I+ ++
Sbjct: 268 DHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQM----KDRDTISWNTMIDGYV 323
Query: 375 ELASLEVGNQVHCFSVKSGLV-LDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWS 433
++ +E F++ S + D N ++ YA G+V A+ F+ T + +SW+
Sbjct: 324 HVSRME-----DAFALFSEMPNRDAHSWNMMVSGYASVGNVELARHYFEKTPEKHTVSWN 378
Query: 434 SLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEE 493
S+I Y + EA++LF +M G +P+ T +LSA + + + G ++ + +
Sbjct: 379 SIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKT 438
Query: 494 LGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTLLSSCKTHGNVDIA 551
+ IP H + ++ + +R G + E+ + ++ TW ++ HGN A
Sbjct: 439 V-IPDVPVH-NALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHGNASEA 494
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 85/171 (49%), Gaps = 35/171 (20%)
Query: 1 MYGKCGSMKDARQVFDAMHL-RNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQL 59
MY +CG + ++R++FD M L R V++W +MI GY+ +G +EA+ ++ M +G +P +
Sbjct: 452 MYSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHI 511
Query: 60 TFGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMI 119
TF S++ AC AG L + A + ++S+Y Q+ H
Sbjct: 512 TFVSVLNACAHAG---LVDEAKAQFV------------SMMSVYKIEPQMEH-------- 548
Query: 120 SIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSAC 170
+SS++ + G EA+Y+ M ++P++ V G++ AC
Sbjct: 549 -------YSSLVNVTSGQGQFEEAMYIITSM----PFEPDKTVWGALLDAC 588
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 263 bits (671), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 141/466 (30%), Positives = 255/466 (54%), Gaps = 11/466 (2%)
Query: 128 SSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICA 187
+SMI+ + + ++ L+RD+ ++ + P+ F ++ +CS + G Q+H
Sbjct: 46 NSMIKAYLETRQYPDSFALYRDLRKETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIW 105
Query: 188 KFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAIS 247
+FG +++ + DMYAK G + A+ AF ++ VSW A+I+ + G+ + A
Sbjct: 106 RFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASK 165
Query: 248 IFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYT 307
+F QM H+ D + + +++ + ++ + +K V + +++ Y
Sbjct: 166 LFDQMPHV---KDVVIYNAMMDGFVKSGDMTSARRLFDEMT----HKTVITWTTMIHGYC 218
Query: 308 KCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSEN-KPNMITI 366
++ A +F+A+ + NLVSWN ++ Q+KQ E RLF++M + + P+ +TI
Sbjct: 219 NIKDIDAARKLFDAMPER-NLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTI 277
Query: 367 TNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTEN 426
++L ++ +L +G HCF + L V V ++DMY+KCG + A+R+FD
Sbjct: 278 LSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPE 337
Query: 427 PNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNL 486
V SW+++I GYA++G AL+LF M + +P+E+T + V++AC+H GLVEEG
Sbjct: 338 KQVASWNAMIHGYALNGNARAALDLFVTMM-IEEKPDEITMLAVITACNHGGLVEEGRKW 396
Query: 487 YNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTLLSSCKTHG 546
++ M E +G+ EH+ CMVDLL RAG L EAE I F+P+ + LS+C +
Sbjct: 397 FHVMRE-MGLNAKIEHYGCMVDLLGRAGSLKEAEDLITNMPFEPNGIILSSFLSACGQYK 455
Query: 547 NVDIAERAAENILKLDPSNSAALVLLSSIHASAGNWEDVAKLRKVL 592
+++ AER + ++L+P N VLL +++A+ W+D ++ V+
Sbjct: 456 DIERAERILKKAVELEPQNDGNYVLLRNLYAADKRWDDFGMVKNVM 501
Score = 155 bits (392), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 102/371 (27%), Positives = 180/371 (48%), Gaps = 10/371 (2%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
MY K G M AR FD M R+ VSWT++ISGY + G+ + A ++ QM D +
Sbjct: 122 MYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQM---PHVKDVVI 178
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMIS 120
+ +++ +GD+ R+L + ++ +I Y N + A +F +
Sbjct: 179 YNAMMDGFVKSGDMTSARRLFDEMTHKT----VITWTTMIHGYCNIKDIDAARKLFDAMP 234
Query: 121 IKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGR 180
++L+SW++MI G+ Q E + LF++M P++ + SV A S G
Sbjct: 235 ERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGE 294
Query: 181 QIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSG 240
H + L + V ++ DMY+KCG + AK F ++ + SWNA+I +A +G
Sbjct: 295 WCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNG 354
Query: 241 DANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYN 300
+A A+ +F MM I PD IT L+++ AC + +G + + ++G N ++ Y
Sbjct: 355 NARAALDLFVTMM-IEEKPDEITMLAVITACNHGGLVEEGRKWFHVMREMGLNAKIEHYG 413
Query: 301 SLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQM--LFSE 358
++ + + +L +A + + N + ++ LSAC Q+K R+ K+ L +
Sbjct: 414 CMVDLLGRAGSLKEAEDLITNMPFEPNGIILSSFLSACGQYKDIERAERILKKAVELEPQ 473
Query: 359 NKPNMITITNL 369
N N + + NL
Sbjct: 474 NDGNYVLLRNL 484
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 109/431 (25%), Positives = 201/431 (46%), Gaps = 16/431 (3%)
Query: 11 ARQVFDAMHLRNVVSWT-SMISGYSQNGQGNEAVVMYIQMLRSG-FFPDQLTFGSIIKAC 68
AR++FD R+ + SMI Y + Q ++ +Y + + F PD TF ++ K+C
Sbjct: 29 ARKLFDQRPQRDDSFLSNSMIKAYLETRQYPDSFALYRDLRKETCFAPDNFTFTTLTKSC 88
Query: 69 CIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIKDLISWS 128
++ +Y G QLH+ + + GF + G++ MY FG++ A + F + + +SW+
Sbjct: 89 SLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSEVSWT 148
Query: 129 SMIRGFTQLGYEIEALYLFRDMLR-QGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICA 187
++I G+ + G A LF M + V N + G V S + + H
Sbjct: 149 ALISGYIRCGELDLASKLFDQMPHVKDVVIYNAMMDGFVKSGDMTSARRLFDEMTH---- 204
Query: 188 KFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAIS 247
+ V + ++ Y + +A+ F + +LVSWN +I + + E I
Sbjct: 205 -----KTVITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIR 259
Query: 248 IFRQMM-HIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMY 306
+F++M L PD +T LS+L A + AL+ G H ++ + +K+V + ++L MY
Sbjct: 260 LFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMY 319
Query: 307 TKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITI 366
+KC + A +F+ + + + SWNA++ + A LF M+ E KP+ IT+
Sbjct: 320 SKCGEIEKAKRIFDEMPEK-QVASWNAMIHGYALNGNARAALDLFVTMMIEE-KPDEITM 377
Query: 367 TNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTE- 425
++ C +E G + + GL + ++D+ + GS+ A+ + +
Sbjct: 378 LAVITACNHGGLVEEGRKWFHVMREMGLNAKIEHYGCMVDLLGRAGSLKEAEDLITNMPF 437
Query: 426 NPNVISWSSLI 436
PN I SS +
Sbjct: 438 EPNGIILSSFL 448
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 262 bits (669), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 183/664 (27%), Positives = 304/664 (45%), Gaps = 143/664 (21%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
+Y K + ARQ+FD + + ++ T+M+SGY
Sbjct: 58 VYCKSSELNYARQLFDEISEPDKIARTTMVSGY--------------------------- 90
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMIS 120
C +GDI L R G A +
Sbjct: 91 --------CASGDITLAR----------------------------GVFEKAP-----VC 109
Query: 121 IKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYG- 179
++D + +++MI GF+ A+ LF M +G ++P+ F SV + + + + E
Sbjct: 110 MRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEG-FKPDNFTFASVLAGLALVADDEKQC 168
Query: 180 RQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLP----SAKTAFYQIESPD---------- 225
Q H K G +L +Y+KC P SA+ F +I D
Sbjct: 169 VQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTG 228
Query: 226 ----------------------LVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSIT 263
LV++NA+I+ + + G EA+ + R+M+ G+ D T
Sbjct: 229 YVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFT 288
Query: 264 FLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALY--NSLLTMYTKCSNLHDALSVFEA 321
+ S++ AC + L G Q+H+Y+++ ++ + + NSL+++Y KC +A ++FE
Sbjct: 289 YPSVIRACATAGLLQLGKQVHAYVLR---REDFSFHFDNSLVSLYYKCGKFDEARAIFEK 345
Query: 322 ISKNANLVSWNAILSACLQHKQAGETFRLFKQM--------------------------L 355
+ +LVSWNA+LS + GE +FK+M L
Sbjct: 346 MPAK-DLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKL 404
Query: 356 FSENK-----PNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAK 410
FS K P + + +CA L + G Q H +K G +S N LI MYAK
Sbjct: 405 FSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAK 464
Query: 411 CGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGV 470
CG V A++VF + + +SW++LI G G EA++++ +M G+RP+ +T + V
Sbjct: 465 CGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTV 524
Query: 471 LSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDP 530
L+ACSH GLV++G +++ME IPP +H++ ++DLL R+G +AE+ I F P
Sbjct: 525 LTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKP 584
Query: 531 DITTWKTLLSSCKTHGNVDIAERAAENILKLDPSNSAALVLLSSIHASAGNWEDVAKLRK 590
W+ LLS C+ HGN+++ AA+ + L P + +LLS++HA+ G WE+VA++RK
Sbjct: 585 TAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNMHAATGQWEEVARVRK 644
Query: 591 VLDD 594
++ D
Sbjct: 645 LMRD 648
Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 119/498 (23%), Positives = 209/498 (41%), Gaps = 88/498 (17%)
Query: 177 EYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVS-------- 228
+ R +HG FG L D+Y K L A+ F +I PD ++
Sbjct: 31 QLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVSGY 90
Query: 229 -------------------------WNAIIAAFADSGDANEAISIFRQMMHIGLIPDSIT 263
+NA+I F+ + D AI++F +M H G PD+ T
Sbjct: 91 CASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFT 150
Query: 264 FLSLLCACTSPMAL-----NQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSN----LHD 314
F S+L +AL Q +Q H+ +K G ++ N+L+++Y+KC++ LH
Sbjct: 151 FASVLAG----LALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHS 206
Query: 315 ALSVF-------------------------------EAISKNANLVSWNAILSACLQHKQ 343
A VF E + N LV++NA++S +
Sbjct: 207 ARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGF 266
Query: 344 AGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNG 403
E + ++M+ S + + T +++ CA L++G QVH + ++ N
Sbjct: 267 YQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRRE-DFSFHFDNS 325
Query: 404 LIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPN 463
L+ +Y KCG A+ +F+ +++SW++L+ GY SG EA +F++M+ N
Sbjct: 326 LVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKE----KN 381
Query: 464 EVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETF- 522
++++ ++S + G EEG L++ M+ E G P FS + A G + +
Sbjct: 382 ILSWMIMISGLAENGFGEEGLKLFSCMKRE-GFEPCDYAFSGAIKSCAVLGAYCNGQQYH 440
Query: 523 --IRKTGFDPDITTWKTLLSSCKTHGNVDIAERAAENILKLDPSNSAALVLLSSIHASAG 580
+ K GFD ++ L++ G V+ A + + LD + AL+ H
Sbjct: 441 AQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGA 500
Query: 581 NWEDVAKLRKVLDDGYDP 598
DV + ++L G P
Sbjct: 501 EAVDVYE--EMLKKGIRP 516
Score = 125 bits (314), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 92/307 (29%), Positives = 143/307 (46%), Gaps = 22/307 (7%)
Query: 2 YGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTF 61
Y G + +A+ +F M +N++SW MISG ++NG G E + ++ M R GF P F
Sbjct: 361 YVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAF 420
Query: 62 GSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISI 121
IK+C + G G+Q HA ++K GF L A N LI+MY G V A VF +
Sbjct: 421 SGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPC 480
Query: 122 KDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQ 181
D +SW+++I Q G+ EA+ ++ +ML++G+ +P+ L +V +ACS + GR+
Sbjct: 481 LDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGI-RPDRITLLTVLTACSHAGLVDQGRK 539
Query: 182 IHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIES--------PDLVSWNAII 233
F + V+ D YA+ L F ES P W A++
Sbjct: 540 Y------FDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALL 593
Query: 234 AAFADSGDANEAISIFRQMMHIGLIPD---SITFLSLLCACTSPMALNQGMQIHSYIVKV 290
+ G N + I GLIP+ + LS + A T + ++ +
Sbjct: 594 SGCRVHG--NMELGIIAADKLFGLIPEHDGTYMLLSNMHAATG--QWEEVARVRKLMRDR 649
Query: 291 GFNKEVA 297
G KEVA
Sbjct: 650 GVKKEVA 656
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 260 bits (664), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 156/482 (32%), Positives = 254/482 (52%), Gaps = 42/482 (8%)
Query: 151 LRQGV--YQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKC 208
L+Q V P +++ G++ +S P+ G++IH K G ++ L ++ KC
Sbjct: 24 LKQNVSSLSPAKYIAGALQEHINSP-APKAGKKIHADIIKTGFQPDLNISIKLLILHLKC 82
Query: 209 GFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLL 268
G L A+ F ++ P L ++N +I+ + G E + + ++M + G D T +L
Sbjct: 83 GCLSYARQVFDELPKPTLSAYNYMISGYLKHGLVKELLLLVQRMSYSGEKADGYTLSMVL 142
Query: 269 CACTS---PMALNQGM--QIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAIS 323
A S M L + + +H+ I+K + L +L+ Y K L A +VFE +
Sbjct: 143 KASNSRGSTMILPRSLCRLVHARIIKCDVELDDVLITALVDTYVKSGKLESARTVFETM- 201
Query: 324 KNANLVSWNAILSACLQH----------------------------KQAGETFRLFKQML 355
K+ N+V +++S + ++GET + M
Sbjct: 202 KDENVVCCTSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMY 261
Query: 356 FSENK----PNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKC 411
S + PN+ T +++G C+ L S EVG QVH +KSG+ + + + L+DMYAKC
Sbjct: 262 ISMQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKC 321
Query: 412 GSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVL 471
G + A+RVFD + NV SW+S+I GY +G EAL LF +M+ + PN VT++G L
Sbjct: 322 GGINDARRVFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGAL 381
Query: 472 SACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPD 531
SACSH GLV++G+ ++ +M+ + + P EH++C+VDL+ RAG L +A F R PD
Sbjct: 382 SACSHSGLVDKGYEIFESMQRDYSMKPKMEHYACIVDLMGRAGDLNKAFEFARAMPERPD 441
Query: 532 ITTWKTLLSSCKTHGNVDIAERAAENILKLDPSN-SAALVLLSSIHASAGNWEDVAKLRK 590
W LLSSC HGNV++A AA + KL+ A + LS+++AS W++V+K+R+
Sbjct: 442 SDIWAALLSSCNLHGNVELASIAASELFKLNADKRPGAYLALSNVYASNDKWDNVSKIRE 501
Query: 591 VL 592
V+
Sbjct: 502 VM 503
Score = 155 bits (392), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 106/392 (27%), Positives = 184/392 (46%), Gaps = 46/392 (11%)
Query: 4 KCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTFGS 63
KCG + ARQVFD + + ++ MISGY ++G E +++ +M SG D T
Sbjct: 81 KCGCLSYARQVFDELPKPTLSAYNYMISGYLKHGLVKELLLLVQRMSYSGEKADGYTLSM 140
Query: 64 IIKACCIAGDIY-----LGRQLHAHVIKSGF----------------------------- 89
++KA G L R +HA +IK
Sbjct: 141 VLKASNSRGSTMILPRSLCRLVHARIIKCDVELDDVLITALVDTYVKSGKLESARTVFET 200
Query: 90 --GGHLVAQNGLISMYTNFGQVAHASDVFTMISIKDLISWSSMIRGFTQLGYEIE-ALYL 146
++V +IS Y N G V A ++F +KD++ +++M+ GF++ G + ++ +
Sbjct: 201 MKDENVVCCTSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDM 260
Query: 147 FRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYA 206
+ M R G + PN SV ACS L E G+Q+H K G+ ++ G SL DMYA
Sbjct: 261 YISMQRAG-FHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYA 319
Query: 207 KCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLS 266
KCG + A+ F Q++ ++ SW ++I + +G+ EA+ +F +M + P+ +TFL
Sbjct: 320 KCGGINDARRVFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLG 379
Query: 267 LLCACTSPMALNQGMQIHSYIVK-VGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKN 325
L AC+ +++G +I + + ++ Y ++ + + +L+ A A+ +
Sbjct: 380 ALSACSHSGLVDKGYEIFESMQRDYSMKPKMEHYACIVDLMGRAGDLNKAFEFARAMPER 439
Query: 326 ANLVSWNAILSACLQHKQ-------AGETFRL 350
+ W A+LS+C H A E F+L
Sbjct: 440 PDSDIWAALLSSCNLHGNVELASIAASELFKL 471
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/237 (30%), Positives = 125/237 (52%), Gaps = 4/237 (1%)
Query: 2 YGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQ-GNEAVVMYIQMLRSGFFPDQLT 60
Y G ++DA ++F+ ++++V + +M+ G+S++G+ +V MYI M R+GF P+ T
Sbjct: 216 YMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNIST 275
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMIS 120
F S+I AC + +G+Q+HA ++KSG H+ + L+ MY G + A VF +
Sbjct: 276 FASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQ 335
Query: 121 IKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGR 180
K++ SW+SMI G+ + G EAL LF M ++ +PN SACS + G
Sbjct: 336 EKNVFSWTSMIDGYGKNGNPEEALELFTRM-KEFRIEPNYVTFLGALSACSHSGLVDKGY 394
Query: 181 QI-HGICAKFGLVRNVFSGCSLCDMYAKCGFLPSA-KTAFYQIESPDLVSWNAIIAA 235
+I + + + + + D+ + G L A + A E PD W A++++
Sbjct: 395 EIFESMQRDYSMKPKMEHYACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSS 451
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 112/473 (23%), Positives = 197/473 (41%), Gaps = 81/473 (17%)
Query: 55 FPDQLTFGSIIKACCIAGDIY---------LGRQLHAHVIKSGFGGHLVAQNGLISMYTN 105
FP + S+ A IAG + G+++HA +IK+GF L L+ ++
Sbjct: 22 FPLKQNVSSLSPAKYIAGALQEHINSPAPKAGKKIHADIIKTGFQPDLNISIKLLILHLK 81
Query: 106 FGQVAHASDVFTMISIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGS 165
G +++A VF + L +++ MI G+ + G E L L + M G + + + L
Sbjct: 82 CGCLSYARQVFDELPKPTLSAYNYMISGYLKHGLVKELLLLVQRMSYSG-EKADGYTLSM 140
Query: 166 VFSACSS-----LLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQ 220
V A +S +L R +H K + + +L D Y K G L SA+T F
Sbjct: 141 VLKASNSRGSTMILPRSLCRLVHARIIKCDVELDDVLITALVDTYVKSGKLESARTVFET 200
Query: 221 IES-------------------------------PDLVSWNAIIAAFADSGD-ANEAISI 248
++ D+V +NA++ F+ SG+ A ++ +
Sbjct: 201 MKDENVVCCTSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDM 260
Query: 249 FRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTK 308
+ M G P+ TF S++ AC+ + G Q+H+ I+K G + + +SLL MY K
Sbjct: 261 YISMQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAK 320
Query: 309 CSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITN 368
C ++DA VF+ + + N+ SW +++ ++ E LF +M +PN +T
Sbjct: 321 CGGINDARRVFDQM-QEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLG 379
Query: 369 LLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPN 428
L C+ +GL+D G I D + P
Sbjct: 380 ALSACSH--------------------------SGLVDK----GYEIFESMQRDYSMKPK 409
Query: 429 VISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVE 481
+ ++ ++ +G ++A R M RP+ + +LS+C+ G VE
Sbjct: 410 MEHYACIVDLMGRAGDLNKAFEFARAMPE---RPDSDIWAALLSSCNLHGNVE 459
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 49/80 (61%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
MY KCG + DAR+VFD M +NV SWTSMI GY +NG EA+ ++ +M P+ +T
Sbjct: 317 MYAKCGGINDARRVFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVT 376
Query: 61 FGSIIKACCIAGDIYLGRQL 80
F + AC +G + G ++
Sbjct: 377 FLGALSACSHSGLVDKGYEI 396
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 258 bits (660), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 153/517 (29%), Positives = 269/517 (52%), Gaps = 45/517 (8%)
Query: 78 RQLHAHVIKSGFGGHLVAQNGLISMYTNFGQ---VAHASDVFTMISIKDLISWSSMIRGF 134
+Q HA ++K+G + + L++ + V++A + I + + +S+IR +
Sbjct: 56 QQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILNRIGSPNGFTHNSVIRAY 115
Query: 135 TQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRN 194
AL +FR+ML V+ P+++ V AC++ E GRQIHG+ K GLV +
Sbjct: 116 ANSSTPEVALTVFREMLLGPVF-PDKYSFTFVLKACAAFCGFEEGRQIHGLFIKSGLVTD 174
Query: 195 VFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMH 254
VF +L ++Y + G+ A+ ++ D VSWN++++A+ + G +EA ++F +M
Sbjct: 175 VFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARALFDEMEE 234
Query: 255 IGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHD 314
+ V +N +++ Y + +
Sbjct: 235 ---------------------------------------RNVESWNFMISGYAAAGLVKE 255
Query: 315 ALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLF-SENKPNMITITNLLGTC 373
A VF+++ ++VSWNA+++A E +F +ML S KP+ T+ ++L C
Sbjct: 256 AKEVFDSMPVR-DVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSAC 314
Query: 374 AELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWS 433
A L SL G VH + K G+ ++ ++ L+DMY+KCG + A VF +T +V +W+
Sbjct: 315 ASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATSKRDVSTWN 374
Query: 434 SLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEE 493
S+I ++ GLG +AL +F +M G +PN +T++GVLSAC+H+G++++ L+ M
Sbjct: 375 SIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHVGMLDQARKLFEMMSSV 434
Query: 494 LGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTLLSSCKTHGNVDIAER 553
+ P EH+ CMVDLL R G + EAE + + D ++LL +CK G ++ AER
Sbjct: 435 YRVEPTIEHYGCMVDLLGRMGKIEEAEELVNEIPADEASILLESLLGACKRFGQLEQAER 494
Query: 554 AAENILKLDPSNSAALVLLSSIHASAGNWEDVAKLRK 590
A +L+L+ +S+ +S+++AS G WE V R+
Sbjct: 495 IANRLLELNLRDSSGYAQMSNLYASDGRWEKVIDGRR 531
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 106/376 (28%), Positives = 173/376 (46%), Gaps = 42/376 (11%)
Query: 11 ARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTFGSIIKACCI 70
A + + + N + S+I Y+ + A+ ++ +ML FPD+ +F ++KAC
Sbjct: 93 AHSILNRIGSPNGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAA 152
Query: 71 AGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIKDLISWSSM 130
GRQ+H IKSG + +N L+++Y G A V + ++D +SW+S+
Sbjct: 153 FCGFEEGRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSL 212
Query: 131 IRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFG 190
+ + + G EA LF +M + V N + G
Sbjct: 213 LSAYLEKGLVDEARALFDEMEERNVESWNFMISG-------------------------- 246
Query: 191 LVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFR 250
YA G + AK F + D+VSWNA++ A+A G NE + +F
Sbjct: 247 --------------YAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFN 292
Query: 251 QMMHIGL-IPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKC 309
+M+ PD T +S+L AC S +L+QG +H YI K G E L +L+ MY+KC
Sbjct: 293 KMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKC 352
Query: 310 SNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNL 369
+ AL VF A SK ++ +WN+I+S H + +F +M++ KPN IT +
Sbjct: 353 GKIDKALEVFRATSKR-DVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGV 411
Query: 370 LGTCAELASLEVGNQV 385
L C + L+ ++
Sbjct: 412 LSACNHVGMLDQARKL 427
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 132/260 (50%), Gaps = 6/260 (2%)
Query: 2 YGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQML-RSGFFPDQLT 60
Y G +K+A++VFD+M +R+VVSW +M++ Y+ G NE + ++ +ML S PD T
Sbjct: 247 YAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFT 306
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMIS 120
S++ AC G + G +H ++ K G L+ MY+ G++ A +VF S
Sbjct: 307 LVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATS 366
Query: 121 IKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGR 180
+D+ +W+S+I + G +AL +F +M+ +G ++PN V SAC+ + + R
Sbjct: 367 KRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEG-FKPNGITFIGVLSACNHVGMLDQAR 425
Query: 181 QIHGICAKFGLVRNVFS--GCSLCDMYAKCGFLPSAKTAFYQIESPDL-VSWNAIIAAFA 237
++ + + V GC + D+ + G + A+ +I + + + +++ A
Sbjct: 426 KLFEMMSSVYRVEPTIEHYGC-MVDLLGRMGKIEEAEELVNEIPADEASILLESLLGACK 484
Query: 238 DSGDANEAISIFRQMMHIGL 257
G +A I +++ + L
Sbjct: 485 RFGQLEQAERIANRLLELNL 504
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 48/80 (60%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
MY KCG + A +VF A R+V +W S+IS S +G G +A+ ++ +M+ GF P+ +T
Sbjct: 348 MYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGIT 407
Query: 61 FGSIIKACCIAGDIYLGRQL 80
F ++ AC G + R+L
Sbjct: 408 FIGVLSACNHVGMLDQARKL 427
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 86/190 (45%), Gaps = 5/190 (2%)
Query: 365 TITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYA---KCGSVIHAQRVF 421
T +L SL Q H F +K+GL D ++ L+ A + +V +A +
Sbjct: 38 TPVPILSFTERAKSLTEIQQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSIL 97
Query: 422 DSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVE 481
+ +PN + +S+I YA S AL +FR+M V P++ ++ VL AC+ E
Sbjct: 98 NRIGSPNGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFE 157
Query: 482 EGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTLLSS 541
EG ++ + G+ + +V++ R+G A + + D +W +LLS+
Sbjct: 158 EGRQIHGLFIKS-GLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVR-DAVSWNSLLSA 215
Query: 542 CKTHGNVDIA 551
G VD A
Sbjct: 216 YLEKGLVDEA 225
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 258 bits (659), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 140/388 (36%), Positives = 223/388 (57%), Gaps = 7/388 (1%)
Query: 211 LPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCA 270
L A+T +WN + ++ S E+I ++ +M G+ P+ +TF LL A
Sbjct: 63 LAFARTLLLHSSDSTPSTWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKA 122
Query: 271 CTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVS 330
C S + L G QI ++K GF+ +V + N+L+ +Y C DA VF+ +++ N+VS
Sbjct: 123 CASFLGLTAGRQIQVEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTER-NVVS 181
Query: 331 WNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSV 390
WN+I++A +++ + F F +M+ P+ T+ LL C +L +G VH +
Sbjct: 182 WNSIMTALVENGKLNLVFECFCEMIGKRFCPDETTMVVLLSACG--GNLSLGKLVHSQVM 239
Query: 391 KSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALN 450
L L+ + L+DMYAK G + +A+ VF+ + NV +WS++IVG A G EAL
Sbjct: 240 VRELELNCRLGTALVDMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQ 299
Query: 451 LFRKM-RNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDL 509
LF KM + VRPN VT++GVL ACSH GLV++G+ ++ ME+ I P H+ MVD+
Sbjct: 300 LFSKMMKESSVRPNYVTFLGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDI 359
Query: 510 LARAGCLYEAETFIRKTGFDPDITTWKTLLSSCKTHGNVD---IAERAAENILKLDPSNS 566
L RAG L EA FI+K F+PD W+TLLS+C H + D I E+ + +++L+P S
Sbjct: 360 LGRAGRLNEAYDFIKKMPFEPDAVVWRTLLSACSIHHDEDDEGIGEKVKKRLIELEPKRS 419
Query: 567 AALVLLSSIHASAGNWEDVAKLRKVLDD 594
LV++++ A A W + A++R+V+ +
Sbjct: 420 GNLVIVANRFAEARMWAEAAEVRRVMKE 447
Score = 142 bits (359), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 95/351 (27%), Positives = 177/351 (50%), Gaps = 10/351 (2%)
Query: 25 SWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTFGSIIKACCIAGDIYLGRQLHAHV 84
+W + GYS + E++ +Y +M R G P++LTF ++KAC + GRQ+ V
Sbjct: 80 TWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQVEV 139
Query: 85 IKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIKDLISWSSMIRGFTQLGYEIEAL 144
+K GF + N LI +Y + + A VF ++ ++++SW+S++ + G
Sbjct: 140 LKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLVF 199
Query: 145 YLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFSGCSLCDM 204
F +M+ + + P+E + + SAC L G+ +H L N G +L DM
Sbjct: 200 ECFCEMIGKR-FCPDETTMVVLLSACGGNL--SLGKLVHSQVMVRELELNCRLGTALVDM 256
Query: 205 YAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLI-PDSIT 263
YAK G L A+ F ++ ++ +W+A+I A G A EA+ +F +MM + P+ +T
Sbjct: 257 YAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVT 316
Query: 264 FLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVAL-YNSLLTMYTKCSNLHDALSVFEAI 322
FL +LCAC+ ++ G + + K+ K + + Y +++ + + L++A + +
Sbjct: 317 FLGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYDFIKKM 376
Query: 323 SKNANLVSWNAILSAC-LQHKQAGETF--RLFKQMLFSENKP--NMITITN 368
+ V W +LSAC + H + E ++ K+++ E K N++ + N
Sbjct: 377 PFEPDAVVWRTLLSACSIHHDEDDEGIGEKVKKRLIELEPKRSGNLVIVAN 427
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 125/277 (45%), Gaps = 45/277 (16%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
+YG C DAR+VFD M RNVVSW S+++ +NG+ N + +M+ F PD+ T
Sbjct: 157 LYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLVFECFCEMIGKRFCPDETT 216
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMIS 120
++ AC G++ LG+ +H+ V+ + L+ MY G + +A VF +
Sbjct: 217 MVVLLSAC--GGNLSLGKLVHSQVMVRELELNCRLGTALVDMYAKSGGLEYARLVFERMV 274
Query: 121 IKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGR 180
K++ +WS+MI G Q G+ EAL LF M+++ +PN V ACS
Sbjct: 275 DKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGVLCACS--------- 325
Query: 181 QIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIE-----SPDLVSWNAIIAA 235
G + F+++E P ++ + A++
Sbjct: 326 --------------------------HTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDI 359
Query: 236 FADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACT 272
+G NEA ++M PD++ + +LL AC+
Sbjct: 360 LGRAGRLNEAYDFIKKM---PFEPDAVVWRTLLSACS 393
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 258 bits (658), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 175/641 (27%), Positives = 313/641 (48%), Gaps = 43/641 (6%)
Query: 2 YGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFF-PDQLT 60
Y K G ++A VF ++ VVS+T++ISG+S+ EA+ ++ +M ++G P++ T
Sbjct: 124 YLKLGFPREAILVFVSLSSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLVQPNEYT 183
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDV---FT 117
F +I+ AC LG Q+H ++KSGF + N L+S+Y + DV F
Sbjct: 184 FVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDK-DSGSSCDDVLKLFD 242
Query: 118 MISIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPE 177
I +D+ SW++++ + G +A LF +M R + + F L ++ S+C+
Sbjct: 243 EIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLL 302
Query: 178 YGRQIHGICAKFGLVRNVFSGCSLCDMYAKC----------------------------- 208
GR++HG + GL++ + +L Y+K
Sbjct: 303 RGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYM 362
Query: 209 --GFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLS 266
G + SA F + + +++NA++A F +G +A+ +F M+ G+ + S
Sbjct: 363 SFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTS 422
Query: 267 LLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNA 326
+ AC QIH + +K G + +LL M T+C + DA +F+ N
Sbjct: 423 AVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQWPSNL 482
Query: 327 NLV-SWNAILSACLQHKQAGETFRLFKQMLFSENK-PNMITITNLLGTCAELASLEVGNQ 384
+ + +I+ ++ + LF + L + + +++T +L C L E+G Q
Sbjct: 483 DSSKATTSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMGYQ 542
Query: 385 VHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGL 444
+HC+++K+G D+S+ N LI MYAKC A ++F++ +VISW+SLI Y +
Sbjct: 543 IHCYALKAGYFSDISLGNSLISMYAKCCDSDDAIKIFNTMREHDVISWNSLISCYILQRN 602
Query: 445 GHEALNLFRKMRNLGVRPNEVTYVGVLSACSHI--GLVEEGWNLYNTMEEELGIPPAREH 502
G EAL L+ +M ++P+ +T V+SA + + +L+ +M+ I P EH
Sbjct: 603 GDEALALWSRMNEKEIKPDIITLTLVISAFRYTESNKLSSCRDLFLSMKTIYDIEPTTEH 662
Query: 503 FSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTLLSSCKTHGNVDIAERAAENILKLD 562
++ V +L G L EAE I P+++ + LL SC+ H N +A+R A+ IL
Sbjct: 663 YTAFVRVLGHWGLLEEAEDTINSMPVQPEVSVLRALLDSCRIHSNTSVAKRVAKLILSTK 722
Query: 563 PSNSAALVLLSSIHASAGNWEDVAKLRKVL-DDGY--DPAQ 600
P + +L S+I++++G W +R+ + + GY PA+
Sbjct: 723 PETPSEYILKSNIYSASGFWHRSEMIREEMRERGYRKHPAK 763
Score = 176 bits (446), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 118/454 (25%), Positives = 223/454 (49%), Gaps = 43/454 (9%)
Query: 73 DIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIKDLISWSSMIR 132
D+ + + +HA +K + N LIS Y G A VF +S ++S++++I
Sbjct: 95 DVEVTKAVHASFLKLREEKTRLG-NALISTYLKLGFPREAILVFVSLSSPTVVSYTALIS 153
Query: 133 GFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLV 192
GF++L EIEAL +F M + G+ QPNE+ ++ +AC + G QIHG+ K G +
Sbjct: 154 GFSRLNLEIEALKVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFL 213
Query: 193 RNVFSGCSLCDMYAK-----CGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAIS 247
+VF SL +Y K C F +I D+ SWN ++++ G +++A
Sbjct: 214 NSVFVSNSLMSLYDKDSGSSCD---DVLKLFDEIPQRDVASWNTVVSSLVKEGKSHKAFD 270
Query: 248 IFRQMMHI-GLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMY 306
+F +M + G DS T +LL +CT L +G ++H +++G +E+++ N+L+ Y
Sbjct: 271 LFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQELSVNNALIGFY 330
Query: 307 TKCSNL------------HDALSVFEAIS------------------KNANLVSWNAILS 336
+K ++ DA++ E I+ N +++NA+++
Sbjct: 331 SKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANVTEKNTITYNALMA 390
Query: 337 ACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVL 396
++ + +LF ML + ++T+ + C ++ +V Q+H F +K G
Sbjct: 391 GFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAVDACGLVSEKKVSEQIHGFCIKFGTAF 450
Query: 397 DVSVSNGLIDMYAKCGSVIHAQRVFDS--TENPNVISWSSLIVGYAMSGLGHEALNLF-R 453
+ + L+DM +C + A+ +FD + + + +S+I GYA +GL +A++LF R
Sbjct: 451 NPCIQTALLDMCTRCERMADAEEMFDQWPSNLDSSKATTSIIGGYARNGLPDKAVSLFHR 510
Query: 454 KMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLY 487
+ + +EV+ +L+ C +G E G+ ++
Sbjct: 511 TLCEQKLFLDEVSLTLILAVCGTLGFREMGYQIH 544
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 62/120 (51%), Gaps = 2/120 (1%)
Query: 369 LLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPN 428
LL A+ +EV VH +K + N LI Y K G A VF S +P
Sbjct: 86 LLRLSAQYHDVEVTKAVHASFLKLREE-KTRLGNALISTYLKLGFPREAILVFVSLSSPT 144
Query: 429 VISWSSLIVGYAMSGLGHEALNLFRKMRNLG-VRPNEVTYVGVLSACSHIGLVEEGWNLY 487
V+S+++LI G++ L EAL +F +MR G V+PNE T+V +L+AC + G ++
Sbjct: 145 VVSYTALISGFSRLNLEIEALKVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSLGIQIH 204
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 37/67 (55%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
MY KC DA ++F+ M +V+SW S+IS Y G+EA+ ++ +M PD +T
Sbjct: 565 MYAKCCDSDDAIKIFNTMREHDVISWNSLISCYILQRNGDEALALWSRMNEKEIKPDIIT 624
Query: 61 FGSIIKA 67
+I A
Sbjct: 625 LTLVISA 631
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 256 bits (654), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 156/503 (31%), Positives = 263/503 (52%), Gaps = 57/503 (11%)
Query: 97 NGLISMYTNFGQVAHASDVFTMISIKDLISWSSMIRGFTQ-LGYEIEALYLFRDMLRQGV 155
N +I+ G + A VF + K+ I+W+S++ G ++ +EA LF + +
Sbjct: 65 NKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMMEAHQLFDE-----I 119
Query: 156 YQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFSGC----SLCDMYAKCGFL 211
+P+ F + S Y R ++ A+ R F ++ YA+ G +
Sbjct: 120 PEPDTFSYNIMLSC--------YVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEM 171
Query: 212 PSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCAC 271
A+ FY + + VSWNA+I+ + + GD +A
Sbjct: 172 EKARELFYSMMEKNEVSWNAMISGYIECGDLEKA-------------------------- 205
Query: 272 TSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSW 331
S+ KV + V + +++T Y K + A ++F+ ++ N NLV+W
Sbjct: 206 -------------SHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTW 252
Query: 332 NAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVK 391
NA++S +++ + + +LF+ ML +PN +++ L C+EL++L++G Q+H K
Sbjct: 253 NAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSK 312
Query: 392 SGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNL 451
S L DV+ LI MY KCG + A ++F+ + +V++W+++I GYA G +AL L
Sbjct: 313 STLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCL 372
Query: 452 FRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLA 511
FR+M + +RP+ +T+V VL AC+H GLV G + +M + + P +H++CMVDLL
Sbjct: 373 FREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLG 432
Query: 512 RAGCLYEAETFIRKTGFDPDITTWKTLLSSCKTHGNVDIAERAAENILKLDPSNSAALVL 571
RAG L EA IR F P + TLL +C+ H NV++AE AAE +L+L+ N+A V
Sbjct: 433 RAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNSQNAAGYVQ 492
Query: 572 LSSIHASAGNWEDVAKLRKVLDD 594
L++I+AS WEDVA++RK + +
Sbjct: 493 LANIYASKNRWEDVARVRKRMKE 515
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 99/343 (28%), Positives = 180/343 (52%), Gaps = 11/343 (3%)
Query: 2 YGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTF 61
Y + + + A+ FD M ++ SW +MI+GY++ G+ +A ++ M+ +++++
Sbjct: 134 YVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSMMEK----NEVSW 189
Query: 62 GSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISI 121
++I GD+ + +H K +VA +I+ Y +V A +F +++
Sbjct: 190 NAMISGYIECGDL----EKASHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTV 245
Query: 122 -KDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGR 180
K+L++W++MI G+ + + L LFR ML +G+ +PN L S CS L + GR
Sbjct: 246 NKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGI-RPNSSGLSSALLGCSELSALQLGR 304
Query: 181 QIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSG 240
QIH I +K L +V + SL MY KCG L A F ++ D+V+WNA+I+ +A G
Sbjct: 305 QIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHG 364
Query: 241 DANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVK-VGFNKEVALY 299
+A++A+ +FR+M+ + PD ITF+++L AC +N GM +V+ + Y
Sbjct: 365 NADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHY 424
Query: 300 NSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHK 342
++ + + L +AL + ++ + + +L AC HK
Sbjct: 425 TCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHK 467
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 82/170 (48%), Gaps = 34/170 (20%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
MY KCG + DA ++F+ M ++VV+W +MISGY+Q+G ++A+ ++ +M+ + PD +T
Sbjct: 328 MYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWIT 387
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMIS 120
F +++ AC AG + +G +++ Y Q H
Sbjct: 388 FVAVLLACNHAGLVNIGMAYFESMVRD---------------YKVEPQPDH--------- 423
Query: 121 IKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSAC 170
++ M+ + G EAL L R M ++P+ V G++ AC
Sbjct: 424 ------YTCMVDLLGRAGKLEEALKLIRSM----PFRPHAAVFGTLLGAC 463
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 256 bits (653), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 153/541 (28%), Positives = 279/541 (51%), Gaps = 14/541 (2%)
Query: 56 PDQLTFGSIIKACCIAGDIYLGRQLHAHVIKSGF-GGHLVAQNGLISMYTNFGQVAHASD 114
P L+ ++ K C +I+L Q+HA +I+ G + + S ++ ++++S
Sbjct: 8 PSLLSLETLFKLC--KSEIHLN-QIHARIIRKGLEQDQNLISIFISSSSSSSSSLSYSSS 64
Query: 115 VFTMISIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLL 174
VF + W+ +I+G++ E + + M+R G+ +P+E+ V CS+
Sbjct: 65 VFERVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNG 124
Query: 175 EPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIA 234
+ G +HG+ + G ++V G S D Y KC L SA+ F ++ + VSW A++
Sbjct: 125 QVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVV 184
Query: 235 AFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNK 294
A+ SG+ EA S+F M L ++ +L+ L ++ + K +
Sbjct: 185 AYVKSGELEEAKSMFDLMPERNLG----SWNALVDGLVKSGDLVNAKKLFDEMPK----R 236
Query: 295 EVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQM 354
++ Y S++ Y K ++ A +FE ++ ++ +W+A++ Q+ Q E F++F +M
Sbjct: 237 DIISYTSMIDGYAKGGDMVSARDLFEE-ARGVDVRAWSALILGYAQNGQPNEAFKVFSEM 295
Query: 355 LFSENKPNMITITNLLGTCAELASLEVGNQVHCF-SVKSGLVLDVSVSNGLIDMYAKCGS 413
KP+ + L+ C+++ E+ +V + + V LIDM AKCG
Sbjct: 296 CAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVPALIDMNAKCGH 355
Query: 414 VIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSA 473
+ A ++F+ +++S+ S++ G A+ G G EA+ LF KM + G+ P+EV + +L
Sbjct: 356 MDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVILKV 415
Query: 474 CSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDIT 533
C LVEEG + M ++ I + +H+SC+V+LL+R G L EA I+ F+ +
Sbjct: 416 CGQSRLVEEGLRYFELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMPFEAHAS 475
Query: 534 TWKTLLSSCKTHGNVDIAERAAENILKLDPSNSAALVLLSSIHASAGNWEDVAKLRKVLD 593
W +LL C HGN +IAE A ++ +L+P ++ + VLLS+I+A+ W DVA LR ++
Sbjct: 476 AWGSLLGGCSLHGNTEIAEVVARHLFELEPQSAGSYVLLSNIYAALDRWTDVAHLRDKMN 535
Query: 594 D 594
+
Sbjct: 536 E 536
Score = 139 bits (349), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 90/345 (26%), Positives = 169/345 (48%), Gaps = 17/345 (4%)
Query: 2 YGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTF 61
YGKC + AR+VF M RN VSWT+++ Y ++G+ EA M+ M ++
Sbjct: 155 YGKCKDLFSARKVFGEMPERNAVSWTALVVAYVKSGELEEAKSMFDLMPERNLG----SW 210
Query: 62 GSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISI 121
+++ +GD+ ++L + K +++ +I Y G + A D+F
Sbjct: 211 NALVDGLVKSGDLVNAKKLFDEMPKR----DIISYTSMIDGYAKGGDMVSARDLFEEARG 266
Query: 122 KDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSL----LEPE 177
D+ +WS++I G+ Q G EA +F +M + V +P+EF++ + SACS + L +
Sbjct: 267 VDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNV-KPDEFIMVGLMSACSQMGCFELCEK 325
Query: 178 YGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFA 237
+H KF + + +L DM AKCG + A F ++ DLVS+ +++ A
Sbjct: 326 VDSYLHQRMNKFS---SHYVVPALIDMNAKCGHMDRAAKLFEEMPQRDLVSYCSMMEGMA 382
Query: 238 DSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYI-VKVGFNKEV 296
G +EAI +F +M+ G++PD + F +L C + +G++ + K
Sbjct: 383 IHGCGSEAIRLFEKMVDEGIVPDEVAFTVILKVCGQSRLVEEGLRYFELMRKKYSILASP 442
Query: 297 ALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQH 341
Y+ ++ + ++ L +A + +++ A+ +W ++L C H
Sbjct: 443 DHYSCIVNLLSRTGKLKEAYELIKSMPFEAHASAWGSLLGGCSLH 487
Score = 138 bits (348), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 105/435 (24%), Positives = 200/435 (45%), Gaps = 16/435 (3%)
Query: 14 VFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGF-FPDQLTFGSIIKACCIAG 72
VF+ + W +I GYS E V + ++M+R+G PD+ TF ++K C G
Sbjct: 65 VFERVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNG 124
Query: 73 DIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIKDLISWSSMIR 132
+ +G +H V++ GF +V + Y + A VF + ++ +SW++++
Sbjct: 125 QVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVV 184
Query: 133 GFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLV 192
+ + G EA +F M + + N V G V S + +++ K
Sbjct: 185 AYVKSGELEEAKSMFDLMPERNLGSWNALVDGLVKSG-----DLVNAKKLFDEMPK---- 235
Query: 193 RNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQM 252
R++ S S+ D YAK G + SA+ F + D+ +W+A+I +A +G NEA +F +M
Sbjct: 236 RDIISYTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEM 295
Query: 253 MHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALY--NSLLTMYTKCS 310
+ PD + L+ AC+ ++ SY+ + NK + Y +L+ M KC
Sbjct: 296 CAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQ-RMNKFSSHYVVPALIDMNAKCG 354
Query: 311 NLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLL 370
++ A +FE + + +LVS+ +++ H E RLF++M+ P+ + T +L
Sbjct: 355 HMDRAAKLFEEMPQR-DLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVIL 413
Query: 371 GTCAELASLEVG-NQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTE-NPN 428
C + +E G K ++ + ++++ ++ G + A + S +
Sbjct: 414 KVCGQSRLVEEGLRYFELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMPFEAH 473
Query: 429 VISWSSLIVGYAMSG 443
+W SL+ G ++ G
Sbjct: 474 ASAWGSLLGGCSLHG 488
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 44/68 (64%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
M KCG M A ++F+ M R++VS+ SM+ G + +G G+EA+ ++ +M+ G PD++
Sbjct: 349 MNAKCGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVA 408
Query: 61 FGSIIKAC 68
F I+K C
Sbjct: 409 FTVILKVC 416
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 254 bits (650), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 144/449 (32%), Positives = 239/449 (53%), Gaps = 39/449 (8%)
Query: 181 QIHGICAKFGLV---RNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFA 237
QIH + L+ R L YA G + + F+Q PDL + A I +
Sbjct: 47 QIHAAILRHNLLLHPRYPVLNLKLHRAYASHGKIRHSLALFHQTIDPDLFLFTAAINTAS 106
Query: 238 DSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVA 297
+G ++A ++ Q++ + P+ TF SLL +C++ G IH++++K G +
Sbjct: 107 INGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCST----KSGKLIHTHVLKFGLGIDPY 162
Query: 298 LYNSLLTMYTKCSNLHDALSVFEAISKNA------------------------------N 327
+ L+ +Y K ++ A VF+ + + + +
Sbjct: 163 VATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERD 222
Query: 328 LVSWNAILSACLQHKQAGETFRLFKQMLFS-ENKPNMITITNLLGTCAELASLEVGNQVH 386
+VSWN ++ QH + LF+++L + KP+ IT+ L C+++ +LE G +H
Sbjct: 223 IVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIH 282
Query: 387 CFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGH 446
F S + L+V V GLIDMY+KCGS+ A VF+ T ++++W+++I GYAM G
Sbjct: 283 VFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQ 342
Query: 447 EALNLFRKMRNL-GVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSC 505
+AL LF +M+ + G++P ++T++G L AC+H GLV EG ++ +M +E GI P EH+ C
Sbjct: 343 DALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGC 402
Query: 506 MVDLLARAGCLYEAETFIRKTGFDPDITTWKTLLSSCKTHGNVDIAERAAENILKLDPSN 565
+V LL RAG L A I+ D D W ++L SCK HG+ + + AE ++ L+ N
Sbjct: 403 LVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKN 462
Query: 566 SAALVLLSSIHASAGNWEDVAKLRKVLDD 594
S VLLS+I+AS G++E VAK+R ++ +
Sbjct: 463 SGIYVLLSNIYASVGDYEGVAKVRNLMKE 491
Score = 174 bits (442), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 110/373 (29%), Positives = 183/373 (49%), Gaps = 37/373 (9%)
Query: 2 YGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTF 61
Y G ++ + +F ++ +T+ I+ S NG ++A ++Y+Q+L S P++ TF
Sbjct: 74 YASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTF 133
Query: 62 GSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVF----- 116
S++K+C G+ +H HV+K G G GL+ +Y G V A VF
Sbjct: 134 SSLLKSCSTKS----GKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPE 189
Query: 117 -------TMISI-------------------KDLISWSSMIRGFTQLGYEIEALYLFRDM 150
MI+ +D++SW+ MI G+ Q G+ +AL LF+ +
Sbjct: 190 RSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKL 249
Query: 151 LRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGF 210
L +G +P+E + + SACS + E GR IH + NV L DMY+KCG
Sbjct: 250 LAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGS 309
Query: 211 LPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHI-GLIPDSITFLSLLC 269
L A F D+V+WNA+IA +A G + +A+ +F +M I GL P ITF+ L
Sbjct: 310 LEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQ 369
Query: 270 ACTSPMALNQGMQI-HSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANL 328
AC +N+G++I S + G ++ Y L+++ + L A + ++ +A+
Sbjct: 370 ACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADS 429
Query: 329 VSWNAILSACLQH 341
V W+++L +C H
Sbjct: 430 VLWSSVLGSCKLH 442
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 103/413 (24%), Positives = 186/413 (45%), Gaps = 53/413 (12%)
Query: 79 QLHAHVIKSGFGGHL---VAQNGLISMYTNFGQVAHASDVFTMISIKDLISWSSMIRGFT 135
Q+HA +++ H V L Y + G++ H+ +F DL +++ I +
Sbjct: 47 QIHAAILRHNLLLHPRYPVLNLKLHRAYASHGKIRHSLALFHQTIDPDLFLFTAAINTAS 106
Query: 136 QLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNV 195
G + +A L+ +L + PNEF S+ +CS+ + G+ IH KFGL +
Sbjct: 107 INGLKDQAFLLYVQLLSSEI-NPNEFTFSSLLKSCST----KSGKLIHTHVLKFGLGIDP 161
Query: 196 FSGCSLCDMYAKCGFLPSAKTAFYQIE-------------------------------SP 224
+ L D+YAK G + SA+ F ++
Sbjct: 162 YVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCER 221
Query: 225 DLVSWNAIIAAFADSGDANEAISIFRQMMHIGLI-PDSITFLSLLCACTSPMALNQGMQI 283
D+VSWN +I +A G N+A+ +F++++ G PD IT ++ L AC+ AL G I
Sbjct: 222 DIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWI 281
Query: 284 HSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQ 343
H ++ V + L+ MY+KC +L +A+ VF + ++V+WNA+++ H
Sbjct: 282 HVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRK-DIVAWNAMIAGYAMHGY 340
Query: 344 AGETFRLFKQML-FSENKPNMITITNLLGTCAELASLEVGNQV-HCFSVKSGLVLDVSVS 401
+ + RLF +M + +P IT L CA + G ++ + G+ +
Sbjct: 341 SQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHY 400
Query: 402 NGLIDMYAKCGSVIHAQRVFDSTENPNV----ISWSSLIVGYAMSG---LGHE 447
L+ + + G + +R +++ +N N+ + WSS++ + G LG E
Sbjct: 401 GCLVSLLGRAGQL---KRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKE 450
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 84/164 (51%), Gaps = 8/164 (4%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLR-SGFFPDQL 59
MY KCGS+++A VF+ +++V+W +MI+GY+ +G +A+ ++ +M +G P +
Sbjct: 303 MYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDI 362
Query: 60 TFGSIIKACCIAGDIYLG-RQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTM 118
TF ++AC AG + G R + + G + L+S+ GQ+ A +
Sbjct: 363 TFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKN 422
Query: 119 ISIK-DLISWSSM-----IRGFTQLGYEIEALYLFRDMLRQGVY 156
+++ D + WSS+ + G LG EI + ++ G+Y
Sbjct: 423 MNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIY 466
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 254 bits (650), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 162/568 (28%), Positives = 280/568 (49%), Gaps = 73/568 (12%)
Query: 93 LVAQNGLISMYTNFGQVAHASDVFTMISIKDLISWSSMIRGFTQLGYEIEALYLFRDMLR 152
LV I+ G++A A VF + D ++W++M+ +++LG EA+ LF LR
Sbjct: 4 LVRLTSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQ-LR 62
Query: 153 QGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLP 212
+P+++ ++ S C+SL ++GR+I + + G ++ SL DMY KC
Sbjct: 63 FSDAKPDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTL 122
Query: 213 SAKTAFYQ-------------------------------IESPDLVS--WNAIIAAFADS 239
SA F +E P V+ WN +I+ A
Sbjct: 123 SANKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHC 182
Query: 240 GDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMA-LNQGMQIHSYIVKVGFNKEVAL 298
G +S+F++M+ PD TF SL+ AC++ + + G +H+ ++K G++ V
Sbjct: 183 GKLESCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEA 242
Query: 299 YNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACL---QHKQAGETF------- 348
NS+L+ YTK + DA+ E+I + VSWN+I+ AC+ + ++A E F
Sbjct: 243 KNSVLSFYTKLGSRDDAMRELESI-EVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKN 301
Query: 349 ---------------------RLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHC 387
R F +M+ S + +L C+ LA L G +H
Sbjct: 302 IVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHG 361
Query: 388 FSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHE 447
+ G V N L+++YAKCG + A R F N +++SW++++ + + GL +
Sbjct: 362 CLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQ 421
Query: 448 ALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMV 507
AL L+ M G++P+ VT++G+L+ CSH GLVEEG ++ +M ++ IP +H +CM+
Sbjct: 422 ALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCMI 481
Query: 508 DLLARAGCLYEAE----TFIRKTGFDPDITTWKTLLSSCKTHGNVDIAERAAENILKL-D 562
D+ R G L EA+ T+ + ++W+TLL +C TH + ++ R +LK+ +
Sbjct: 482 DMFGRGGHLAEAKDLATTYSSLVTDSSNNSSWETLLGACSTHWHTELG-REVSKVLKIAE 540
Query: 563 PSNSAALVLLSSIHASAGNWEDVAKLRK 590
PS + VLLS+++ S G W++ +R+
Sbjct: 541 PSEEMSFVLLSNLYCSTGRWKEGEDVRR 568
Score = 193 bits (490), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 141/505 (27%), Positives = 224/505 (44%), Gaps = 73/505 (14%)
Query: 3 GKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTFG 62
K G + ARQVFD M + V+W +M++ YS+ G EA+ ++ Q+ S PD +F
Sbjct: 15 AKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKPDDYSFT 74
Query: 63 SIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISM-------------------- 102
+I+ C G++ GR++ + VI+SGF L N LI M
Sbjct: 75 AILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCCD 134
Query: 103 -------------YTNFGQVAHASDVFTMISIKDLISWSSMIRGFTQLGYEIEALYLFRD 149
Y N Q A DVF + + +W+ MI G G L LF++
Sbjct: 135 SRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKE 194
Query: 150 MLRQGVYQPNEFVLGSVFSACSS-LLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKC 208
ML + ++P+ + S+ +ACS+ YGR +H + K G V + S+ Y K
Sbjct: 195 ML-ESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKL 253
Query: 209 GFLPSAKTAFYQIESPDLVSWNAIIAA-------------------------------FA 237
G A IE VSWN+II A +
Sbjct: 254 GSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYG 313
Query: 238 DSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVA 297
+GD +A+ F +MM G+ D + ++L AC+ L G IH ++ GF
Sbjct: 314 RNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAY 373
Query: 298 LYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFS 357
+ N+L+ +Y KC ++ +A F I+ N +LVSWN +L A H A + +L+ M+ S
Sbjct: 374 VGNALVNLYAKCGDIKEADRAFGDIA-NKDLVSWNTMLFAFGVHGLADQALKLYDNMIAS 432
Query: 358 ENKPNMITITNLLGTCAELASLEVGNQVHCFSVKS-GLVLDVSVSNGLIDMYAKCGSVIH 416
KP+ +T LL TC+ +E G + VK + L+V +IDM+ + G +
Sbjct: 433 GIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCMIDMFGRGGHLAE 492
Query: 417 AQRVFDS-----TENPNVISWSSLI 436
A+ + + T++ N SW +L+
Sbjct: 493 AKDLATTYSSLVTDSSNNSSWETLL 517
Score = 172 bits (435), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 121/440 (27%), Positives = 204/440 (46%), Gaps = 61/440 (13%)
Query: 11 ARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTFGSIIKACCI 70
A VF M R +W MISG++ G+ + ++ +ML S F PD TF S++ AC
Sbjct: 157 ALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEMLESEFKPDCYTFSSLMNACSA 216
Query: 71 -AGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNF----------------------- 106
+ ++ GR +HA ++K+G+ + A+N ++S YT
Sbjct: 217 DSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELESIEVLTQVSWNS 276
Query: 107 --------GQVAHASDVFTMISIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQP 158
G+ A +VF + K++++W++MI G+ + G +AL F +M++ GV
Sbjct: 277 IIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGV-DS 335
Query: 159 NEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAF 218
+ F G+V ACS L +G+ IHG G + G +L ++YAKCG + A AF
Sbjct: 336 DHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAF 395
Query: 219 YQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALN 278
I + DLVSWN ++ AF G A++A+ ++ M+ G+ PD++TF+ LL C+ +
Sbjct: 396 GDIANKDLVSWNTMLFAFGVHGLADQALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVE 455
Query: 279 QGMQIHSYIVK-VGFNKEVALYNSLLTMYTKCSNLHDALSVFEA----ISKNANLVSWNA 333
+G I +VK EV ++ M+ + +L +A + ++ ++N SW
Sbjct: 456 EGCMIFESMVKDYRIPLEVDHVTCMIDMFGRGGHLAEAKDLATTYSSLVTDSSNNSSWET 515
Query: 334 ILSACLQHKQAGETFRLFKQMLFSENKPNM--ITITNLLGTCAELAS------------- 378
+L AC H + K + +E M + ++NL +
Sbjct: 516 LLGACSTHWHTELGREVSKVLKIAEPSEEMSFVLLSNLYCSTGRWKEGEDVRREMVERGM 575
Query: 379 --------LEVGNQVHCFSV 390
+EVGNQV F V
Sbjct: 576 KKTPGCSWIEVGNQVSTFVV 595
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 120/237 (50%), Gaps = 5/237 (2%)
Query: 4 KCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTFGS 63
K G + A +VF +N+V+WT+MI+GY +NG G +A+ +++M++SG D +G+
Sbjct: 283 KIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGA 342
Query: 64 IIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIKD 123
++ AC + G+ +H +I GF G+ N L+++Y G + A F I+ KD
Sbjct: 343 VLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKD 402
Query: 124 LISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIH 183
L+SW++M+ F G +AL L+ +M+ G+ N +G + + S L E
Sbjct: 403 LVSWNTMLFAFGVHGLADQALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFE 462
Query: 184 GICAKFGLVRNVFSGCSLCDMYAKCGFLPSAK---TAFYQI--ESPDLVSWNAIIAA 235
+ + + V + DM+ + G L AK T + + +S + SW ++ A
Sbjct: 463 SMVKDYRIPLEVDHVTCMIDMFGRGGHLAEAKDLATTYSSLVTDSSNNSSWETLLGA 519
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 60/123 (48%), Gaps = 17/123 (13%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
+Y KCG +K+A + F + +++VSW +M+ + +G ++A+ +Y M+ SG PD +T
Sbjct: 381 LYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQALKLYDNMIASGIKPDNVT 440
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKS-----------------GFGGHLVAQNGLISMY 103
F ++ C +G + G + ++K G GGHL L + Y
Sbjct: 441 FIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCMIDMFGRGGHLAEAKDLATTY 500
Query: 104 TNF 106
++
Sbjct: 501 SSL 503
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 253 bits (647), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 159/511 (31%), Positives = 265/511 (51%), Gaps = 12/511 (2%)
Query: 79 QLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIKDLISWSSMIRGFTQLG 138
++H +++K+G A + L++ +++ + +AS +F +S +L +++MIRG++ +
Sbjct: 46 RIHGYMVKTGLDKDDFAVSKLLA-FSSVLDIRYASSIFEHVSNTNLFMFNTMIRGYS-IS 103
Query: 139 YEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFSG 198
E E + + LR + F + +CS L G +HGI + G + VF+
Sbjct: 104 DEPERAFSVFNQLRAKGLTLDRFSFITTLKSCSRELCVSIGEGLHGIALRSGFM--VFTD 161
Query: 199 C--SLCDMYAKCGFLPSAKTAFYQI-ESPDLVSWNAIIAAFADSGDANEAISIFRQMMHI 255
+L Y CG + A+ F ++ +S D V+++ ++ + A+ +FR M
Sbjct: 162 LRNALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALALDLFRIMRKS 221
Query: 256 GLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDA 315
++ + T LS L A + L+ H +K+G + ++ L +L+ MY K + A
Sbjct: 222 EVVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGMYGKTGGISSA 281
Query: 316 LSVFE-AISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCA 374
+F+ AI K+ +V+WN ++ + E L +QM + + KPN T LL +CA
Sbjct: 282 RRIFDCAIRKD--VVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCA 339
Query: 375 ELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSS 434
+ VG V + + LD + L+DMYAK G + A +F+ ++ +V SW++
Sbjct: 340 YSEAAFVGRTVADLLEEERIALDAILGTALVDMYAKVGLLEKAVEIFNRMKDKDVKSWTA 399
Query: 435 LIVGYAMSGLGHEALNLFRKMR--NLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEE 492
+I GY GL EA+ LF KM N VRPNE+T++ VL+ACSH GLV EG + M E
Sbjct: 400 MISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVVLNACSHGGLVMEGIRCFKRMVE 459
Query: 493 ELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTLLSSCKTHGNVDIAE 552
P EH+ C+VDLL RAG L EA IR D T W+ LL++C+ +GN D+ E
Sbjct: 460 AYSFTPKVEHYGCVVDLLGRAGQLEEAYELIRNLPITSDSTAWRALLAACRVYGNADLGE 519
Query: 553 RAAENILKLDPSNSAALVLLSSIHASAGNWE 583
+ ++ ++ A +LL+ HA AGN E
Sbjct: 520 SVMMRLAEMGETHPADAILLAGTHAVAGNPE 550
Score = 149 bits (377), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 132/496 (26%), Positives = 225/496 (45%), Gaps = 40/496 (8%)
Query: 8 MKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTFGSIIKA 67
++ A +F+ + N+ + +MI GYS + + A ++ Q+ G D+ +F + +K+
Sbjct: 75 IRYASSIFEHVSNTNLFMFNTMIRGYSISDEPERAFSVFNQLRAKGLTLDRFSFITTLKS 134
Query: 68 CCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVF-TMISIKDLIS 126
C + +G LH ++SGF +N LI Y G+++ A VF M D ++
Sbjct: 135 CSRELCVSIGEGLHGIALRSGFMVFTDLRNALIHFYCVCGKISDARKVFDEMPQSVDAVT 194
Query: 127 WSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGIC 186
+S+++ G+ Q+ + AL LFR ++R+ N L S SA S L + H +C
Sbjct: 195 FSTLMNGYLQVSKKALALDLFR-IMRKSEVVVNVSTLLSFLSAISDLGDLSGAESAHVLC 253
Query: 187 AKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAI 246
K GL ++ +L MY K G + SA+ F D+V+WN +I +A +G E +
Sbjct: 254 IKIGLDLDLHLITALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECV 313
Query: 247 SIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMY 306
+ RQM + + P+S TF+ LL +C A G + + + + L +L+ MY
Sbjct: 314 WLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVADLLEEERIALDAILGTALVDMY 373
Query: 307 TKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSEN---KPNM 363
K L A+ +F + K+ ++ SW A++S H A E LF +M EN +PN
Sbjct: 374 AKVGLLEKAVEIFNRM-KDKDVKSWTAMISGYGAHGLAREAVTLFNKME-EENCKVRPNE 431
Query: 364 ITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDS 423
IT +L C+ + G + CF +++ Y+ V H V D
Sbjct: 432 ITFLVVLNACSHGGLVMEG--IRCF-------------KRMVEAYSFTPKVEHYGCVVD- 475
Query: 424 TENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEG 483
++G A G EA L +RNL + + + +L+AC G + G
Sbjct: 476 ------------LLGRA--GQLEEAYEL---IRNLPITSDSTAWRALLAACRVYGNADLG 518
Query: 484 WNLYNTMEEELGIPPA 499
++ + E PA
Sbjct: 519 ESVMMRLAEMGETHPA 534
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 92/341 (26%), Positives = 168/341 (49%), Gaps = 5/341 (1%)
Query: 2 YGKCGSMKDARQVFDAM-HLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
Y CG + DAR+VFD M + V+++++++GY Q + A+ ++ M +S + T
Sbjct: 170 YCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALALDLFRIMRKSEVVVNVST 229
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMIS 120
S + A GD+ H IK G L LI MY G ++ A +F
Sbjct: 230 LLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGMYGKTGGISSARRIFDCAI 289
Query: 121 IKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGR 180
KD+++W+ MI + + G E ++L R M + + +PN + S+C+ GR
Sbjct: 290 RKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKM-KPNSSTFVGLLSSCAYSEAAFVGR 348
Query: 181 QIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSG 240
+ + + + + G +L DMYAK G L A F +++ D+ SW A+I+ + G
Sbjct: 349 TVADLLEEERIALDAILGTALVDMYAKVGLLEKAVEIFNRMKDKDVKSWTAMISGYGAHG 408
Query: 241 DANEAISIFRQM--MHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKV-GFNKEVA 297
A EA+++F +M + + P+ ITFL +L AC+ + +G++ +V+ F +V
Sbjct: 409 LAREAVTLFNKMEEENCKVRPNEITFLVVLNACSHGGLVMEGIRCFKRMVEAYSFTPKVE 468
Query: 298 LYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSAC 338
Y ++ + + L +A + + ++ +W A+L+AC
Sbjct: 469 HYGCVVDLLGRAGQLEEAYELIRNLPITSDSTAWRALLAAC 509
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 123/265 (46%), Gaps = 15/265 (5%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
MYGK G + AR++FD ++VV+W MI Y++ G E V + QM P+ T
Sbjct: 271 MYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSST 330
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMIS 120
F ++ +C + ++GR + + + + L+ MY G + A ++F +
Sbjct: 331 FVGLLSSCAYSEAAFVGRTVADLLEEERIALDAILGTALVDMYAKVGLLEKAVEIFNRMK 390
Query: 121 IKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGV-YQPNEFVLGSVFSACSSLLEPEYG 179
KD+ SW++MI G+ G EA+ LF M + +PNE V +ACS G
Sbjct: 391 DKDVKSWTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVVLNACS-----HGG 445
Query: 180 RQIHGI-CAKFGLVRNVFS------GCSLCDMYAKCGFLPSAKTAFYQIE-SPDLVSWNA 231
+ GI C K + F+ GC + D+ + G L A + + D +W A
Sbjct: 446 LVMEGIRCFKRMVEAYSFTPKVEHYGC-VVDLLGRAGQLEEAYELIRNLPITSDSTAWRA 504
Query: 232 IIAAFADSGDANEAISIFRQMMHIG 256
++AA G+A+ S+ ++ +G
Sbjct: 505 LLAACRVYGNADLGESVMMRLAEMG 529
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 253 bits (646), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 142/448 (31%), Positives = 238/448 (53%), Gaps = 35/448 (7%)
Query: 180 RQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFA-- 237
+Q H GL R+ + + + G L A + F P+ N +I A +
Sbjct: 32 KQSHCYMIITGLNRDNLNVAKFIEACSNAGHLRYAYSVFTHQPCPNTYLHNTMIRALSLL 91
Query: 238 DSGDANE-AISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEV 296
D +A+ AI+++R++ + PD+ TF +L + G QIH +V GF+ V
Sbjct: 92 DEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSV 151
Query: 297 ALYNSLLTMYTKCSNLHDALSVF-EAISKNANL--------------------------- 328
+ L+ MY C L DA +F E + K+ N+
Sbjct: 152 HVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCW 211
Query: 329 ----VSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQ 384
VSW ++S + +A E +F++ML +P+ +T+ +L CA+L SLE+G +
Sbjct: 212 VRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGER 271
Query: 385 VHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGL 444
+ + G+ VS++N +IDMYAK G++ A VF+ NV++W+++I G A G
Sbjct: 272 ICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGH 331
Query: 445 GHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFS 504
G EAL +F +M GVRPN+VT++ +LSACSH+G V+ G L+N+M + GI P EH+
Sbjct: 332 GAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYG 391
Query: 505 CMVDLLARAGCLYEAETFIRKTGFDPDITTWKTLLSSCKTHGNVDIAERAAENILKLDPS 564
CM+DLL RAG L EA+ I+ F + W +LL++ H ++++ ERA ++KL+P+
Sbjct: 392 CMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLELGERALSELIKLEPN 451
Query: 565 NSAALVLLSSIHASAGNWEDVAKLRKVL 592
NS +LL++++++ G W++ +R ++
Sbjct: 452 NSGNYMLLANLYSNLGRWDESRMMRNMM 479
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 118/457 (25%), Positives = 206/457 (45%), Gaps = 51/457 (11%)
Query: 78 RQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIKDLISWSSMIRGFTQL 137
+Q H ++I +G + I +N G + +A VFT + ++MIR + L
Sbjct: 32 KQSHCYMIITGLNRDNLNVAKFIEACSNAGHLRYAYSVFTHQPCPNTYLHNTMIRALSLL 91
Query: 138 ----GYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVR 193
+ I A+ ++R L +P+ F V + + +GRQIHG FG
Sbjct: 92 DEPNAHSI-AITVYRK-LWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDS 149
Query: 194 NVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDL--------------------------- 226
+V L MY CG L A+ F ++ D+
Sbjct: 150 SVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMP 209
Query: 227 ------VSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQG 280
VSW +I+ +A SG A+EAI +F++M+ + PD +T L++L AC +L G
Sbjct: 210 CWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELG 269
Query: 281 MQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQ 340
+I SY+ G N+ V+L N+++ MY K N+ AL VFE +++ N+V+W I++
Sbjct: 270 ERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNER-NVVTWTTIIAGLAT 328
Query: 341 HKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQV-HCFSVKSGLVLDVS 399
H E +F +M+ + +PN +T +L C+ + +++G ++ + K G+ ++
Sbjct: 329 HGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIE 388
Query: 400 VSNGLIDMYAKCGSVIHAQRVFDSTE-NPNVISWSSLIVGYAMS---GLGHEALNLFRKM 455
+ID+ + G + A V S N W SL+ + LG AL+ K+
Sbjct: 389 HYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLELGERALSELIKL 448
Query: 456 RNLGVRPNEV-TYVGVLSACSHIGLVEEGWNLYNTME 491
PN Y+ + + S++G +E + N M+
Sbjct: 449 -----EPNNSGNYMLLANLYSNLGRWDESRMMRNMMK 480
Score = 145 bits (367), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 105/403 (26%), Positives = 183/403 (45%), Gaps = 40/403 (9%)
Query: 6 GSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNE---AVVMYIQMLRSGFFPDQLTFG 62
G ++ A VF N +MI S + N A+ +Y ++ PD TF
Sbjct: 61 GHLRYAYSVFTHQPCPNTYLHNTMIRALSLLDEPNAHSIAITVYRKLWALCAKPDTFTFP 120
Query: 63 SIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIK 122
++K D++ GRQ+H V+ GF + GLI MY + G + A +F + +K
Sbjct: 121 FVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVK 180
Query: 123 DL---------------------------------ISWSSMIRGFTQLGYEIEALYLFRD 149
D+ +SW+ +I G+ + G EA+ +F+
Sbjct: 181 DVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQR 240
Query: 150 MLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCG 209
ML + V +P+E L +V SAC+ L E G +I G+ R V ++ DMYAK G
Sbjct: 241 MLMENV-EPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSG 299
Query: 210 FLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLC 269
+ A F + ++V+W IIA A G EA+++F +M+ G+ P+ +TF+++L
Sbjct: 300 NITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILS 359
Query: 270 ACTSPMALNQGMQI-HSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANL 328
AC+ ++ G ++ +S K G + + Y ++ + + L +A V +++ AN
Sbjct: 360 ACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANA 419
Query: 329 VSWNAILSACLQHKQAGETFRLFKQMLFSE--NKPNMITITNL 369
W ++L+A H R +++ E N N + + NL
Sbjct: 420 AIWGSLLAASNVHHDLELGERALSELIKLEPNNSGNYMLLANL 462
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 134/238 (56%), Gaps = 5/238 (2%)
Query: 2 YGKCGSMKDARQVFDAMH--LRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQL 59
YGK G M +AR + + M +RN VSWT +ISGY+++G+ +EA+ ++ +ML PD++
Sbjct: 192 YGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEV 251
Query: 60 TFGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMI 119
T +++ AC G + LG ++ ++V G + N +I MY G + A DVF +
Sbjct: 252 TLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECV 311
Query: 120 SIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYG 179
+ +++++W+++I G G+ EAL +F M++ GV +PN+ ++ SACS + + G
Sbjct: 312 NERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGV-RPNDVTFIAILSACSHVGWVDLG 370
Query: 180 RQI-HGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIE-SPDLVSWNAIIAA 235
+++ + + +K+G+ N+ + D+ + G L A + + W +++AA
Sbjct: 371 KRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAA 428
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 81/134 (60%), Gaps = 4/134 (2%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
MY K G++ A VF+ ++ RNVV+WT++I+G + +G G EA+ M+ +M+++G P+ +T
Sbjct: 294 MYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVT 353
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQN--GLISMYTNFGQVAHASDVFTM 118
F +I+ AC G + LG++L + ++S +G H ++ +I + G++ A +V
Sbjct: 354 FIAILSACSHVGWVDLGKRLF-NSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKS 412
Query: 119 ISIK-DLISWSSMI 131
+ K + W S++
Sbjct: 413 MPFKANAAIWGSLL 426
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 253 bits (645), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 156/526 (29%), Positives = 253/526 (48%), Gaps = 46/526 (8%)
Query: 64 IIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIKD 123
IIK C L A +IK+ N I+ T+F ++ A T + +
Sbjct: 779 IIKQCSTPK---LLESALAAMIKTSLNQDCRLMNQFITACTSFKRLDLAVSTMTQMQEPN 835
Query: 124 LISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIH 183
+ ++++ +GF + I +L L+ MLR V P+ + S+ A S +G +
Sbjct: 836 VFVYNALFKGFVTCSHPIRSLELYVRMLRDSV-SPSSYTYSSLVKASS--FASRFGESLQ 892
Query: 184 GICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDAN 243
KFG +V +L D Y+ G + A+ F ++ D ++W +++A+ D +
Sbjct: 893 AHIWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPERDDIAWTTMVSAYRRVLDMD 952
Query: 244 EAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLL 303
A S+ QM K A N L+
Sbjct: 953 SANSLANQMS---------------------------------------EKNEATSNCLI 973
Query: 304 TMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNM 363
Y NL A S+F + +++SW ++ Q+K+ E +F +M+ P+
Sbjct: 974 NGYMGLGNLEQAESLFNQMPVK-DIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDE 1032
Query: 364 ITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDS 423
+T++ ++ CA L LE+G +VH +++++G VLDV + + L+DMY+KCGS+ A VF +
Sbjct: 1033 VTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFN 1092
Query: 424 TENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEG 483
N+ W+S+I G A G EAL +F KM V+PN VT+V V +AC+H GLV+EG
Sbjct: 1093 LPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEG 1152
Query: 484 WNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTLLSSCK 543
+Y +M ++ I EH+ MV L ++AG +YEA I F+P+ W LL C+
Sbjct: 1153 RRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLDGCR 1212
Query: 544 THGNVDIAERAAENILKLDPSNSAALVLLSSIHASAGNWEDVAKLR 589
H N+ IAE A ++ L+P NS LL S++A W DVA++R
Sbjct: 1213 IHKNLVIAEIAFNKLMVLEPMNSGYYFLLVSMYAEQNRWRDVAEIR 1258
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 97/342 (28%), Positives = 171/342 (50%), Gaps = 41/342 (11%)
Query: 2 YGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTF 61
Y G +++AR+VFD M R+ ++WT+M+S Y + + M + +Q++
Sbjct: 914 YSATGRIREARKVFDEMPERDDIAWTTMVSAYRR----------VLDMDSANSLANQMSE 963
Query: 62 GSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISI 121
+ + C LI+ Y G + A +F + +
Sbjct: 964 KNEATSNC-----------------------------LINGYMGLGNLEQAESLFNQMPV 994
Query: 122 KDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQ 181
KD+ISW++MI+G++Q EA+ +F M+ +G+ P+E + +V SAC+ L E G++
Sbjct: 995 KDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGII-PDEVTMSTVISACAHLGVLEIGKE 1053
Query: 182 IHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGD 241
+H + G V +V+ G +L DMY+KCG L A F+ + +L WN+II A G
Sbjct: 1054 VHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGF 1113
Query: 242 ANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIH-SYIVKVGFNKEVALYN 300
A EA+ +F +M + P+++TF+S+ ACT +++G +I+ S I V Y
Sbjct: 1114 AQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYG 1173
Query: 301 SLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHK 342
++ +++K +++AL + + N V W A+L C HK
Sbjct: 1174 GMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLDGCRIHK 1215
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 75/170 (44%), Gaps = 34/170 (20%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
MY KCGS++ A VF + +N+ W S+I G + +G EA+ M+ +M P+ +T
Sbjct: 1076 MYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVT 1135
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMIS 120
F S+ AC AG + GR+++ +I Y+ V H
Sbjct: 1136 FVSVFTACTHAGLVDEGRRIY---------------RSMIDDYSIVSNVEH--------- 1171
Query: 121 IKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSAC 170
+ M+ F++ G EAL L +M ++PN + G++ C
Sbjct: 1172 ------YGGMVHLFSKAGLIYEALELIGNM----EFEPNAVIWGALLDGC 1211
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 252 bits (644), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 152/452 (33%), Positives = 246/452 (54%), Gaps = 39/452 (8%)
Query: 179 GRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFAD 238
+ +H K G+V+ +L ++Y KCG A F ++ D ++W +++ A
Sbjct: 22 AKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDHIAWASVLTALNQ 81
Query: 239 SGDANEAISIFRQMMHIG-LIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVA 297
+ + + +S+F + L PD F +L+ AC + +++ G Q+H + + + +
Sbjct: 82 ANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEV 141
Query: 298 LYNSLLTMYTKCSNLHDALSVFEAIS-KNA-----------------------------N 327
+ +SL+ MY KC L+ A +VF++I KN N
Sbjct: 142 VKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKN 201
Query: 328 LVSWNAILSACLQHKQAGETFRLFKQMLFSE-NKPNMITITNLLGTCAELASLEVGNQVH 386
L SW A++S +Q + E F +F +M + + + +++++G CA LA+ G QVH
Sbjct: 202 LYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVH 261
Query: 387 CFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGH 446
+ G V +SN LIDMYAKC VI A+ +F + +V+SW+SLIVG A G
Sbjct: 262 GLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAE 321
Query: 447 EALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCM 506
+AL L+ M + GV+PNEVT+VG++ ACSH+G VE+G L+ +M ++ GI P+ +H++C+
Sbjct: 322 KALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCL 381
Query: 507 VDLLARAGCLYEAETFIRKTGFDPDITTWKTLLSSCKTHGNVDIAERAAENIL---KL-D 562
+DLL R+G L EAE I F PD TW LLS+CK G + R A++++ KL D
Sbjct: 382 LDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRIADHLVSSFKLKD 441
Query: 563 PSNSAALVLLSSIHASAGNWEDVAKLRKVLDD 594
PS +LLS+I+ASA W V++ R+ L +
Sbjct: 442 PST---YILLSNIYASASLWGKVSEARRKLGE 470
Score = 190 bits (482), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 119/410 (29%), Positives = 200/410 (48%), Gaps = 36/410 (8%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQ-NGQGNEAVVMYIQMLRSGFFPDQL 59
+YGKCG+ A QVFD M R+ ++W S+++ +Q N G V SG PD
Sbjct: 47 VYGKCGAASHALQVFDEMPHRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDF 106
Query: 60 TFGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMI 119
F +++KAC G I GRQ+H H I S + V ++ L+ MY G + A VF I
Sbjct: 107 VFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSI 166
Query: 120 SIKDLISWSSMIRGFTQLGYEIEALYLFR------------------------------- 148
+K+ ISW++M+ G+ + G + EAL LFR
Sbjct: 167 RVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFT 226
Query: 149 DMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKC 208
+M R+ V + VL S+ AC++L GRQ+HG+ G VF +L DMYAKC
Sbjct: 227 EMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKC 286
Query: 209 GFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLL 268
+ +AK F ++ D+VSW ++I A G A +A++++ M+ G+ P+ +TF+ L+
Sbjct: 287 SDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLI 346
Query: 269 CACTSPMALNQGMQIHSYIVK-VGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNAN 327
AC+ + +G ++ + K G + Y LL + + L +A ++ + +
Sbjct: 347 YACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPD 406
Query: 328 LVSWNAILSACLQHKQAGETFRLFKQMLFS---ENKPNMITITNLLGTCA 374
+W A+LSAC + + R+ ++ S ++ I ++N+ + +
Sbjct: 407 EPTWAALLSACKRQGRGQMGIRIADHLVSSFKLKDPSTYILLSNIYASAS 456
Score = 163 bits (412), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 114/464 (24%), Positives = 210/464 (45%), Gaps = 38/464 (8%)
Query: 65 IKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIKDL 124
++ C + + LHAH++K G N L+++Y G +HA VF + +D
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDH 69
Query: 125 ISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHG 184
I+W+S++ Q + L +F + +P++FV ++ AC++L ++GRQ+H
Sbjct: 70 IAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHC 129
Query: 185 ICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANE 244
+ SL DMYAKCG L SAK F I + +SW A+++ +A SG E
Sbjct: 130 HFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEE 189
Query: 245 AISIFRQMMHIGL--------------------------------IPDSITFLSLLCACT 272
A+ +FR + L I D + S++ AC
Sbjct: 190 ALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACA 249
Query: 273 SPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWN 332
+ A G Q+H ++ +GF+ V + N+L+ MY KCS++ A +F + ++ ++VSW
Sbjct: 250 NLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRM-RHRDVVSWT 308
Query: 333 AILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQV-HCFSVK 391
+++ QH QA + L+ M+ KPN +T L+ C+ + +E G ++ +
Sbjct: 309 SLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKD 368
Query: 392 SGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTE-NPNVISWSSLIVGYAMSGLGHEALN 450
G+ + L+D+ + G + A+ + + P+ +W++L+ G G +
Sbjct: 369 YGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIR 428
Query: 451 LFRKMRNLGVRPNEVTYV---GVLSACSHIGLVEEGWNLYNTME 491
+ + + + TY+ + ++ S G V E ME
Sbjct: 429 IADHLVSSFKLKDPSTYILLSNIYASASLWGKVSEARRKLGEME 472
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 80/238 (33%), Positives = 126/238 (52%), Gaps = 9/238 (3%)
Query: 257 LIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDAL 316
LIP +L L C L +H++IVK+G + L N+L+ +Y KC AL
Sbjct: 2 LIPH---YLHQLQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHAL 58
Query: 317 SVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSEN-KPNMITITNLLGTCAE 375
VF+ + + + ++W ++L+A Q +G+T +F + S +P+ + L+ CA
Sbjct: 59 QVFDEMP-HRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACAN 117
Query: 376 LASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSL 435
L S++ G QVHC + S D V + L+DMYAKCG + A+ VFDS N ISW+++
Sbjct: 118 LGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAM 177
Query: 436 IVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEE 493
+ GYA SG EAL LFR L V+ N ++ ++S G E ++++ M E
Sbjct: 178 VSGYAKSGRKEEALELFRI---LPVK-NLYSWTALISGFVQSGKGLEAFSVFTEMRRE 231
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 88/184 (47%), Gaps = 5/184 (2%)
Query: 370 LGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNV 429
L CA +L +H VK G+V ++N L+++Y KCG+ HA +VFD + +
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDH 69
Query: 430 ISWSSLIVGYAMSGLGHEAL-NLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLY- 487
I+W+S++ + L + L + G+RP++ + ++ AC+++G ++ G ++
Sbjct: 70 IAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHC 129
Query: 488 NTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTLLSSCKTHGN 547
+ + E + S +VD+ A+ G L A+ I +W ++S G
Sbjct: 130 HFIVSEYANDEVVK--SSLVDMYAKCGLLNSAKAVFDSIRVKNTI-SWTAMVSGYAKSGR 186
Query: 548 VDIA 551
+ A
Sbjct: 187 KEEA 190
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 252 bits (644), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 162/582 (27%), Positives = 294/582 (50%), Gaps = 31/582 (5%)
Query: 56 PDQLTFGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDV 115
P L F ++ ++ L + +HA ++++GF N + +Y G V +A +
Sbjct: 2 PSSLYFSRLVNRSLLSKSPTLAKIVHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQL 61
Query: 116 FTMISIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSV--------- 166
F I K+ I+W+ ++G + GY AL LF +M + V N + G V
Sbjct: 62 FDDIPDKNTITWNVCLKGLFKNGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGI 121
Query: 167 -----------------FSACSSLLE-PEYGRQIHGICAKFGLVR-NVFSGCSLCDMYAK 207
FS +SL+ +G QIHG G+ R N+ S+ DMY +
Sbjct: 122 RVFFDMQRWEIRPTEFTFSILASLVTCVRHGEQIHGNAICSGVSRYNLVVWNSVMDMYRR 181
Query: 208 CGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSL 267
G A + F +E D+VSWN +I + +DSG+ A+ F M + + PD T +
Sbjct: 182 LGVFDYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMV 241
Query: 268 LCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNAN 327
+ C+ L++G Q + +K+GF + + + M++KC+ L D++ +F + K +
Sbjct: 242 VSICSDLRELSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDS 301
Query: 328 LVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHC 387
++ N+++ + H + RLF + +P+ T +++L + + L+ G VH
Sbjct: 302 VLC-NSMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVLSSMNAVM-LDHGADVHS 359
Query: 388 FSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHE 447
+K G LD +V+ L++MY K GSV A VF T+ ++I W+++I+G A + E
Sbjct: 360 LVIKLGFDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLARNSRAVE 419
Query: 448 ALNLFRKM-RNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCM 506
+L +F ++ N ++P+ VT +G+L AC + G V EG ++++ME+ G+ P EH++C+
Sbjct: 420 SLAIFNQLLMNQSLKPDRVTLMGILVACCYAGFVNEGIQIFSSMEKAHGVNPGNEHYACI 479
Query: 507 VDLLARAGCLYEAETFIRKTGFDPDITTWKTLLSSCKTHGNVDIAERAAENILKLDPSNS 566
++LL R G + EA+ K F+P W+ +L + G+ +AE A+ +L+ +P +S
Sbjct: 480 IELLCRVGMINEAKDIADKIPFEPSSHIWEPILCASLDLGDTRLAETVAKTMLESEPKSS 539
Query: 567 AALVLLSSIHASAGNWEDVAKLRKVLDDGYDPAQRLGIRISI 608
++L I+ WE+ KLR +++ + + +ISI
Sbjct: 540 FPYLVLIKIYEMTWRWENSVKLRYAMNEHKLKSAQGSSKISI 581
Score = 176 bits (447), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 115/384 (29%), Positives = 201/384 (52%), Gaps = 8/384 (2%)
Query: 4 KCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTFGS 63
K G + +A +FD M R+VVSW +MISG G + ++ M R P + TF S
Sbjct: 82 KNGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEFTF-S 140
Query: 64 IIKACCIAGDIYLGRQLHAHVIKSGFGGH-LVAQNGLISMYTNFGQVAHASDVFTMISIK 122
I+ + + + G Q+H + I SG + LV N ++ MY G +A VF + +
Sbjct: 141 ILAS--LVTCVRHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDR 198
Query: 123 DLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQI 182
D++SW+ +I + G + AL F ++R+ QP+E+ + V S CS L E G+Q
Sbjct: 199 DVVSWNCLILSCSDSGNKEVALDQFW-LMREMEIQPDEYTVSMVVSICSDLRELSKGKQA 257
Query: 183 HGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDA 242
+C K G + N + DM++KC L + F ++E D V N++I +++
Sbjct: 258 LALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSYSWHCCG 317
Query: 243 NEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSL 302
+A+ +F M + PD TF S+L + + M L+ G +HS ++K+GF+ + A+ SL
Sbjct: 318 EDALRLFILAMTQSVRPDKFTFSSVLSSMNAVM-LDHGADVHSLVIKLGFDLDTAVATSL 376
Query: 303 LTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSEN-KP 361
+ MY K ++ A+ VF A + +L+ WN ++ ++ +A E+ +F Q+L +++ KP
Sbjct: 377 MEMYFKTGSVDLAMGVF-AKTDGKDLIFWNTVIMGLARNSRAVESLAIFNQLLMNQSLKP 435
Query: 362 NMITITNLLGTCAELASLEVGNQV 385
+ +T+ +L C + G Q+
Sbjct: 436 DRVTLMGILVACCYAGFVNEGIQI 459
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 101/371 (27%), Positives = 173/371 (46%), Gaps = 7/371 (1%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
MY + G A VF M R+VVSW +I S +G A+ + M PD+ T
Sbjct: 178 MYRRLGVFDYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYT 237
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMIS 120
++ C ++ G+Q A IK GF + + I M++ ++ + +F +
Sbjct: 238 VSMVVSICSDLRELSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELE 297
Query: 121 IKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGR 180
D + +SMI ++ +AL LF + Q V +P++F SV S+ ++++ ++G
Sbjct: 298 KWDSVLCNSMIGSYSWHCCGEDALRLFILAMTQSV-RPDKFTFSSVLSSMNAVM-LDHGA 355
Query: 181 QIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSG 240
+H + K G + SL +MY K G + A F + + DL+ WN +I A +
Sbjct: 356 DVHSLVIKLGFDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLARNS 415
Query: 241 DANEAISIFRQ-MMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKV-GFNKEVAL 298
A E+++IF Q +M+ L PD +T + +L AC +N+G+QI S + K G N
Sbjct: 416 RAVESLAIFNQLLMNQSLKPDRVTLMGILVACCYAGFVNEGIQIFSSMEKAHGVNPGNEH 475
Query: 299 YNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSE 358
Y ++ + + +++A + + I + W IL A L + K ML SE
Sbjct: 476 YACIIELLCRVGMINEAKDIADKIPFEPSSHIWEPILCASLDLGDTRLAETVAKTMLESE 535
Query: 359 NK---PNMITI 366
K P ++ I
Sbjct: 536 PKSSFPYLVLI 546
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 252 bits (643), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 134/454 (29%), Positives = 243/454 (53%), Gaps = 9/454 (1%)
Query: 147 FRDMLRQGVYQPNEFV------LGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFSGCS 200
FR + R+ + FV + S+ +A S + E R +H K R+ F G
Sbjct: 12 FRFLYRRRFLSQSSFVHSLDANVSSLIAAVKSCVSIELCRLLHCKVVKSVSYRHGFIGDQ 71
Query: 201 LCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMM--HIGLI 258
L Y + G A+ F ++ DLVSWN++I+ ++ G + + +MM +G
Sbjct: 72 LVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFR 131
Query: 259 PDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSV 318
P+ +TFLS++ AC + +G IH ++K G +EV + N+ + Y K +L + +
Sbjct: 132 PNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKL 191
Query: 319 FEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELAS 378
FE +S NLVSWN ++ LQ+ A + F ++P+ T +L +C ++
Sbjct: 192 FEDLSIK-NLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGV 250
Query: 379 LEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVG 438
+ + +H + G + ++ L+D+Y+K G + + VF +P+ ++W++++
Sbjct: 251 VRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAA 310
Query: 439 YAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPP 498
YA G G +A+ F M + G+ P+ VT+ +L+ACSH GLVEEG + + TM + I P
Sbjct: 311 YATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDP 370
Query: 499 AREHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTLLSSCKTHGNVDIAERAAENI 558
+H+SCMVDLL R+G L +A I++ +P W LL +C+ + + + +AAE +
Sbjct: 371 RLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAERL 430
Query: 559 LKLDPSNSAALVLLSSIHASAGNWEDVAKLRKVL 592
+L+P + V+LS+I++++G W+D +++R ++
Sbjct: 431 FELEPRDGRNYVMLSNIYSASGLWKDASRIRNLM 464
Score = 169 bits (429), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 112/368 (30%), Positives = 188/368 (51%), Gaps = 14/368 (3%)
Query: 11 ARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRS--GFFPDQLTFGSIIKAC 68
A ++FD M R++VSW S+ISGYS G + + +M+ S GF P+++TF S+I AC
Sbjct: 85 AEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISAC 144
Query: 69 CIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIKDLISWS 128
G GR +H V+K G + N I+ Y G + + +F +SIK+L+SW+
Sbjct: 145 VYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWN 204
Query: 129 SMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAK 188
+MI Q G + L F +M R+ ++P++ +V +C + + IHG+
Sbjct: 205 TMIVIHLQNGLAEKGLAYF-NMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMF 263
Query: 189 FGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISI 248
G N +L D+Y+K G L + T F++I SPD ++W A++AA+A G +AI
Sbjct: 264 GGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKH 323
Query: 249 FRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVK-VGFNKEVALYNSLLTMYT 307
F M+H G+ PD +TF LL AC+ + +G + K + + Y+ ++ +
Sbjct: 324 FELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLG 383
Query: 308 KCSNLHDALSVFEAISKNANLVSWNAILSACLQHK------QAGETFRLFKQMLFSENKP 361
+ L DA + + + + W A+L AC +K +A E RLF+ L +
Sbjct: 384 RSGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAE--RLFE--LEPRDGR 439
Query: 362 NMITITNL 369
N + ++N+
Sbjct: 440 NYVMLSNI 447
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 97/321 (30%), Positives = 158/321 (49%), Gaps = 5/321 (1%)
Query: 65 IKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIKDL 124
+K+C I L R LH V+KS H + L+ Y G A +F + +DL
Sbjct: 41 VKSCV---SIELCRLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDEMPERDL 97
Query: 125 ISWSSMIRGFTQLGYEIEAL-YLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIH 183
+SW+S+I G++ GY + L R M+ + ++PNE S+ SAC E GR IH
Sbjct: 98 VSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEGRCIH 157
Query: 184 GICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDAN 243
G+ KFG++ V + + Y K G L S+ F + +LVSWN +I +G A
Sbjct: 158 GLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAE 217
Query: 244 EAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLL 303
+ ++ F +G PD TFL++L +C + IH I+ GF+ + +LL
Sbjct: 218 KGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALL 277
Query: 304 TMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNM 363
+Y+K L D+ +VF I+ + + ++W A+L+A H + + F+ M+ P+
Sbjct: 278 DLYSKLGRLEDSSTVFHEIT-SPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDH 336
Query: 364 ITITNLLGTCAELASLEVGNQ 384
+T T+LL C+ +E G
Sbjct: 337 VTFTHLLNACSHSGLVEEGKH 357
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 116/236 (49%), Gaps = 3/236 (1%)
Query: 2 YGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTF 61
YGK G + + ++F+ + ++N+VSW +MI + QNG + + + R G PDQ TF
Sbjct: 179 YGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATF 238
Query: 62 GSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISI 121
+++++C G + L + +H ++ GF G+ L+ +Y+ G++ +S VF I+
Sbjct: 239 LAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITS 298
Query: 122 KDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACS-SLLEPEYGR 180
D ++W++M+ + G+ +A+ F M+ G+ P+ + +ACS S L E
Sbjct: 299 PDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGI-SPDHVTFTHLLNACSHSGLVEEGKH 357
Query: 181 QIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIE-SPDLVSWNAIIAA 235
+ ++ + + + D+ + G L A ++ P W A++ A
Sbjct: 358 YFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALLGA 413
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 46/79 (58%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
+Y K G ++D+ VF + + ++WT+M++ Y+ +G G +A+ + M+ G PD +T
Sbjct: 279 LYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVT 338
Query: 61 FGSIIKACCIAGDIYLGRQ 79
F ++ AC +G + G+
Sbjct: 339 FTHLLNACSHSGLVEEGKH 357
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 251 bits (640), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 150/430 (34%), Positives = 227/430 (52%), Gaps = 23/430 (5%)
Query: 180 RQIHGICAKFGLVRN------VFSGCSLC----DMYAKCGFLPSAKTAFYQIESPDLVSW 229
RQIH + + L+RN S +L D+ C F Q +P L
Sbjct: 28 RQIHALLLRTSLIRNSDVFHHFLSRLALSLIPRDINYSC-------RVFSQRLNPTLSHC 80
Query: 230 NAIIAAFADSGDANEAISIFRQMMHIGLIP-DSITFLSLLCACTSPMALNQGMQIHSYIV 288
N +I AF+ S E +FR + +P + ++ L C L G+QIH I
Sbjct: 81 NTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLGGLQIHGKIF 140
Query: 289 KVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETF 348
GF + L +L+ +Y+ C N DA VF+ I K + VSWN + S L++K+ +
Sbjct: 141 SDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKR-DTVSWNVLFSCYLRNKRTRDVL 199
Query: 349 RLFKQMLFSEN---KPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLI 405
LF +M + KP+ +T L CA L +L+ G QVH F ++GL +++SN L+
Sbjct: 200 VLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGALNLSNTLV 259
Query: 406 DMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEV 465
MY++CGS+ A +VF NV+SW++LI G AM+G G EA+ F +M G+ P E
Sbjct: 260 SMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFGISPEEQ 319
Query: 466 TYVGVLSACSHIGLVEEGWNLYNTMEE-ELGIPPAREHFSCMVDLLARAGCLYEAETFIR 524
T G+LSACSH GLV EG ++ M E I P H+ C+VDLL RA L +A + I+
Sbjct: 320 TLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRARLLDKAYSLIK 379
Query: 525 KTGFDPDITTWKTLLSSCKTHGNVDIAERAAENILKLDPSNSAALVLLSSIHASAGNWED 584
PD T W+TLL +C+ HG+V++ ER ++++L + VLL + +++ G WE
Sbjct: 380 SMEMKPDSTIWRTLLGACRVHGDVELGERVISHLIELKAEEAGDYVLLLNTYSTVGKWEK 439
Query: 585 VAKLRKVLDD 594
V +LR ++ +
Sbjct: 440 VTELRSLMKE 449
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 94/392 (23%), Positives = 167/392 (42%), Gaps = 13/392 (3%)
Query: 28 SMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTFGSIIKACCI-AGDIYLGRQLHAHVIK 86
+MI +S + E ++ + R+ P S CCI +GD+ G Q+H +
Sbjct: 82 TMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLGGLQIHGKIFS 141
Query: 87 SGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIKDLISWSSMIRGFTQLGYEIEALYL 146
GF + L+ +Y+ A VF I +D +SW+ + + + + L L
Sbjct: 142 DGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDVLVL 201
Query: 147 FRDMLRQ--GVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFSGCSLCDM 204
F M G +P+ AC++L ++G+Q+H + GL + +L M
Sbjct: 202 FDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGALNLSNTLVSM 261
Query: 205 YAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITF 264
Y++CG + A FY + ++VSW A+I+ A +G EAI F +M+ G+ P+ T
Sbjct: 262 YSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFGISPEEQTL 321
Query: 265 LSLLCACTSPMALNQGMQIHSYIVKVGFNKEVAL--YNSLLTMYTKCSNLHDALSVFEAI 322
LL AC+ + +GM + F + L Y ++ + + L A S+ +++
Sbjct: 322 TGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRARLLDKAYSLIKSM 381
Query: 323 SKNANLVSWNAILSACLQHKQAGETFRLFKQM--LFSENKPNMITITNLLGT------CA 374
+ W +L AC H R+ + L +E + + + N T
Sbjct: 382 EMKPDSTIWRTLLGACRVHGDVELGERVISHLIELKAEEAGDYVLLLNTYSTVGKWEKVT 441
Query: 375 ELASLEVGNQVHCFSVKSGLVLDVSVSNGLID 406
EL SL ++H S + L +V ++D
Sbjct: 442 ELRSLMKEKRIHTKPGCSAIELQGTVHEFIVD 473
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 143/313 (45%), Gaps = 14/313 (4%)
Query: 71 AGDIYLGRQLHAHVIK------SGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIKDL 124
G ++L RQ+HA +++ S H +++ L + + + ++ VF+ L
Sbjct: 22 TGKLHL-RQIHALLLRTSLIRNSDVFHHFLSRLALSLIPRD---INYSCRVFSQRLNPTL 77
Query: 125 ISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHG 184
++MIR F+ E LFR + R N C + G QIHG
Sbjct: 78 SHCNTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLGGLQIHG 137
Query: 185 ICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANE 244
G + + +L D+Y+ C A F +I D VSWN + + + + +
Sbjct: 138 KIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKRTRD 197
Query: 245 AISIFRQMMH--IGLI-PDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNS 301
+ +F +M + G + PD +T L L AC + AL+ G Q+H +I + G + + L N+
Sbjct: 198 VLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGALNLSNT 257
Query: 302 LLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKP 361
L++MY++C ++ A VF + + N+VSW A++S + E F +ML P
Sbjct: 258 LVSMYSRCGSMDKAYQVFYGM-RERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFGISP 316
Query: 362 NMITITNLLGTCA 374
T+T LL C+
Sbjct: 317 EEQTLTGLLSACS 329
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 150/310 (48%), Gaps = 37/310 (11%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQM---LRSGFFPD 57
+Y C + DA +VFD + R+ VSW + S Y +N + + +V++ +M + PD
Sbjct: 157 LYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPD 216
Query: 58 QLTFGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFT 117
+T ++AC G + G+Q+H + ++G G L N L+SMY+ G + A VF
Sbjct: 217 GVTCLLALQACANLGALDFGKQVHDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFY 276
Query: 118 MISIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPE 177
+ ++++SW+++I G G+ EA+ F +ML+ G+ P E L + SACS
Sbjct: 277 GMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFGI-SPEEQTLTGLLSACSH----- 330
Query: 178 YGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFA 237
G+ A+ G++ F ++ ++I+ P+L + ++
Sbjct: 331 -----SGLVAE-GMM-----------------FFDRMRSGEFKIK-PNLHHYGCVVDLLG 366
Query: 238 DSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVA 297
+ ++A S+ + M + PDS + +LL AC + G ++ S+++++ +E
Sbjct: 367 RARLLDKAYSLIKSM---EMKPDSTIWRTLLGACRVHGDVELGERVISHLIELK-AEEAG 422
Query: 298 LYNSLLTMYT 307
Y LL Y+
Sbjct: 423 DYVLLLNTYS 432
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 250 bits (639), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 145/531 (27%), Positives = 263/531 (49%), Gaps = 5/531 (0%)
Query: 63 SIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIK 122
++I C + +Q+H +I N L+ F Q ++ +F+
Sbjct: 18 TLISVACTVNHL---KQIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFP 74
Query: 123 DLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQI 182
++ ++S+I GF E L LF + + G+Y + F V AC+ + G +
Sbjct: 75 NIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYL-HGFTFPLVLKACTRASSRKLGIDL 133
Query: 183 HGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDA 242
H + K G +V + SL +Y+ G L A F +I +V+W A+ + + SG
Sbjct: 134 HSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRH 193
Query: 243 NEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSL 302
EAI +F++M+ +G+ PDS + +L AC L+ G I Y+ ++ K + +L
Sbjct: 194 REAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTL 253
Query: 303 LTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPN 362
+ +Y KC + A SVF+++ + ++V+W+ ++ + E LF QML KP+
Sbjct: 254 VNLYAKCGKMEKARSVFDSMVEK-DIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPD 312
Query: 363 MITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFD 422
+I L +CA L +L++G + + ++ ++N LIDMYAKCG++ VF
Sbjct: 313 QFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFK 372
Query: 423 STENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEE 482
+ +++ ++ I G A +G + +F + LG+ P+ T++G+L C H GL+++
Sbjct: 373 EMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQD 432
Query: 483 GWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTLLSSC 542
G +N + + EH+ CMVDL RAG L +A I P+ W LLS C
Sbjct: 433 GLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGC 492
Query: 543 KTHGNVDIAERAAENILKLDPSNSAALVLLSSIHASAGNWEDVAKLRKVLD 593
+ + +AE + ++ L+P N+ V LS+I++ G W++ A++R +++
Sbjct: 493 RLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMN 543
Score = 184 bits (466), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 117/430 (27%), Positives = 210/430 (48%), Gaps = 10/430 (2%)
Query: 14 VFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTFGSIIKACCIAGD 73
+F N+ + S+I+G+ N +E + +++ + + G + TF ++KAC A
Sbjct: 67 LFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASS 126
Query: 74 IYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIKDLISWSSMIRG 133
LG LH+ V+K GF + A L+S+Y+ G++ A +F I + +++W+++ G
Sbjct: 127 RKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSG 186
Query: 134 FTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVR 193
+T G EA+ LF+ M+ GV +P+ + + V SAC + + + G I + + +
Sbjct: 187 YTTSGRHREAIDLFKKMVEMGV-KPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQK 245
Query: 194 NVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMM 253
N F +L ++YAKCG + A++ F + D+V+W+ +I +A + E I +F QM+
Sbjct: 246 NSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQML 305
Query: 254 HIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLH 313
L PD + + L +C S AL+ G S I + F + + N+L+ MY KC +
Sbjct: 306 QENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMA 365
Query: 314 DALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTC 373
VF+ + K ++V NA +S ++ +F +F Q P+ T LL C
Sbjct: 366 RGFEVFKEM-KEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGC 424
Query: 374 AELASLEVG----NQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVF-DSTENPN 428
++ G N + C L V ++D++ + G + A R+ D PN
Sbjct: 425 VHAGLIQDGLRFFNAISCV---YALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPN 481
Query: 429 VISWSSLIVG 438
I W +L+ G
Sbjct: 482 AIVWGALLSG 491
Score = 180 bits (456), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 103/374 (27%), Positives = 194/374 (51%), Gaps = 8/374 (2%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
+Y G + DA ++FD + R+VV+WT++ SGY+ +G+ EA+ ++ +M+ G PD
Sbjct: 155 IYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYF 214
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMIS 120
++ AC GD+ G + ++ + + + L+++Y G++ A VF +
Sbjct: 215 IVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMV 274
Query: 121 IKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGR 180
KD+++WS+MI+G+ + E + LF ML++ + +P++F + S+C+SL + G
Sbjct: 275 EKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENL-KPDQFSIVGFLSSCASLGALDLGE 333
Query: 181 QIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSG 240
+ + + N+F +L DMYAKCG + F +++ D+V NA I+ A +G
Sbjct: 334 WGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNG 393
Query: 241 DANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKV-GFNKEVALY 299
+ ++F Q +G+ PD TFL LLC C + G++ + I V + V Y
Sbjct: 394 HVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHY 453
Query: 300 NSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSAC--LQHKQAGETFRLFKQMLFS 357
++ ++ + L DA + + N + W A+LS C ++ Q ET + K+++
Sbjct: 454 GCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAET--VLKELIAL 511
Query: 358 E--NKPNMITITNL 369
E N N + ++N+
Sbjct: 512 EPWNAGNYVQLSNI 525
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 249 bits (637), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 136/421 (32%), Positives = 230/421 (54%), Gaps = 39/421 (9%)
Query: 208 CGFLPSAKTA---FYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITF 264
C L S A F + +P++ + A+I F SG + + +S++ +M+H ++PD+
Sbjct: 71 CSTLDSVDYAYDVFSYVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVI 130
Query: 265 LSLLCACTSPMALNQGMQIHSYIVKVGFN-------KEVALYNS---------------- 301
S+L AC L +IH+ ++K+GF K + +Y
Sbjct: 131 TSVLKACD----LKVCREIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPD 186
Query: 302 --------LLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQ 353
++ Y++C + +AL +F+ + K + V W A++ +++K+ + LF++
Sbjct: 187 RDHVAATVMINCYSECGFIKEALELFQDV-KIKDTVCWTAMIDGLVRNKEMNKALELFRE 245
Query: 354 MLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGS 413
M N T +L C++L +LE+G VH F + L V N LI+MY++CG
Sbjct: 246 MQMENVSANEFTAVCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGD 305
Query: 414 VIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSA 473
+ A+RVF + +VIS++++I G AM G EA+N FR M N G RPN+VT V +L+A
Sbjct: 306 INEARRVFRVMRDKDVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNA 365
Query: 474 CSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDIT 533
CSH GL++ G ++N+M+ + P EH+ C+VDLL R G L EA FI +PD
Sbjct: 366 CSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHI 425
Query: 534 TWKTLLSSCKTHGNVDIAERAAENILKLDPSNSAALVLLSSIHASAGNWEDVAKLRKVLD 593
TLLS+CK HGN+++ E+ A+ + + + +S VLLS+++AS+G W++ ++R+ +
Sbjct: 426 MLGTLLSACKIHGNMELGEKIAKRLFESENPDSGTYVLLSNLYASSGKWKESTEIRESMR 485
Query: 594 D 594
D
Sbjct: 486 D 486
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 122/440 (27%), Positives = 209/440 (47%), Gaps = 62/440 (14%)
Query: 7 SMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTFGSIIK 66
S+ A VF + NV +T+MI G+ +G+ + V +Y +M+ + PD S++K
Sbjct: 76 SVDYAYDVFSYVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLK 135
Query: 67 ACCIAGDIYLGRQLHAHVIKSGFG----------------GHL---------------VA 95
AC D+ + R++HA V+K GFG G L VA
Sbjct: 136 AC----DLKVCREIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVA 191
Query: 96 QNGLISMYTNFGQVAHASDVFTMISIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGV 155
+I+ Y+ G + A ++F + IKD + W++MI G + +AL LFR+M + V
Sbjct: 192 ATVMINCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENV 251
Query: 156 YQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAK 215
NEF V SACS L E GR +H + + F G +L +MY++CG + A+
Sbjct: 252 -SANEFTAVCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEAR 310
Query: 216 TAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPM 275
F + D++S+N +I+ A G + EAI+ FR M++ G P+ +T ++LL AC+
Sbjct: 311 RVFRVMRDKDVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGG 370
Query: 276 ALNQGMQIHSYIVKVGFNKE--VALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNA 333
L+ G+++ + + +V FN E + Y ++ + + L +A E I + +
Sbjct: 371 LLDIGLEVFNSMKRV-FNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGT 429
Query: 334 ILSACLQHKQAGETFRLFKQMLFSENKPN--MITITNLLGTCAE---------------- 375
+LSAC H ++ K++ SEN + + ++NL + +
Sbjct: 430 LLSACKIHGNMELGEKIAKRLFESENPDSGTYVLLSNLYASSGKWKESTEIRESMRDSGI 489
Query: 376 -----LASLEVGNQVHCFSV 390
+++EV NQ+H F V
Sbjct: 490 EKEPGCSTIEVDNQIHEFLV 509
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 114/504 (22%), Positives = 217/504 (43%), Gaps = 76/504 (15%)
Query: 60 TFGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMI 119
T S++++C +I +HA +I++ LI + + V +A DVF+ +
Sbjct: 31 TLISVLRSC---KNIAHVPSIHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFSYV 87
Query: 120 SIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYG 179
S ++ +++MI GF G + + L+ M+ V P+ +V+ SV AC + +
Sbjct: 88 SNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVL-PDNYVITSVLKAC----DLKVC 142
Query: 180 RQIHGICAKFGLVRNVFSGCSLCDMYAK-------------------------------C 208
R+IH K G + G + ++Y K C
Sbjct: 143 REIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSEC 202
Query: 209 GFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLL 268
GF+ A F ++ D V W A+I + + N+A+ +FR+M + + T + +L
Sbjct: 203 GFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVL 262
Query: 269 CACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANL 328
AC+ AL G +HS++ + N+L+ MY++C ++++A VF + ++ ++
Sbjct: 263 SACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVM-RDKDV 321
Query: 329 VSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCF 388
+S+N ++S H + E F+ M+ +PN +T+ LL C+ L++G
Sbjct: 322 ISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIG------ 375
Query: 389 SVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEA 448
+ V N + +RVF+ P + + ++ G EA
Sbjct: 376 ---------LEVFNSM-------------KRVFNV--EPQIEHYGCIVDLLGRVGRLEEA 411
Query: 449 LNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVD 508
+R + N+ + P+ + +LSAC G +E G + + E P + + +
Sbjct: 412 ---YRFIENIPIEPDHIMLGTLLSACKIHGNMELGEKIAKRLFESEN--PDSGTYVLLSN 466
Query: 509 LLARAGCLYEAETFIRKTGFDPDI 532
L A +G E+ T IR++ D I
Sbjct: 467 LYASSGKWKES-TEIRESMRDSGI 489
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 141/294 (47%), Gaps = 38/294 (12%)
Query: 2 YGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTF 61
Y +CG +K+A ++F + +++ V WT+MI G +N + N+A+ ++ +M ++ T
Sbjct: 199 YSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTA 258
Query: 62 GSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISI 121
++ AC G + LGR +H+ V N LI+MY+ G + A VF ++
Sbjct: 259 VCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRD 318
Query: 122 KDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQ 181
KD+IS+++MI G G +EA+ FRDM+ +G ++PN+ L ++ +ACS
Sbjct: 319 KDVISYNTMISGLAMHGASVEAINEFRDMVNRG-FRPNQVTLVALLNACS---------- 367
Query: 182 IHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGD 241
HG GL VF+ S K F +E P + + I+ G
Sbjct: 368 -HGGLLDIGL--EVFN---------------SMKRVF-NVE-PQIEHYGCIVDLLGRVGR 407
Query: 242 ANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKE 295
EA +R + +I + PD I +LL AC ++ M++ I K F E
Sbjct: 408 LEEA---YRFIENIPIEPDHIMLGTLLSACK----IHGNMELGEKIAKRLFESE 454
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/303 (21%), Positives = 124/303 (40%), Gaps = 78/303 (25%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
MY +CG + +AR+VF M ++V+S+ +MISG + +G EA+ + M+ GF P+Q+T
Sbjct: 299 MYSRCGDINEARRVFRVMRDKDVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVT 358
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMIS 120
+++ AC G + +G ++ N + ++ Q+ H
Sbjct: 359 LVALLNACSHGGLLDIGLEVF---------------NSMKRVFNVEPQIEH--------- 394
Query: 121 IKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGR 180
+ ++ ++G +E Y F + +P+ +LG++ SAC
Sbjct: 395 ------YGCIVDLLGRVG-RLEEAYRF---IENIPIEPDHIMLGTLLSAC---------- 434
Query: 181 QIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSG 240
+IHG L + AK ++ E+PD ++ + +A SG
Sbjct: 435 KIHG-------------NMELGEKIAK---------RLFESENPDSGTYVLLSNLYASSG 472
Query: 241 DANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIV-KVGFNKEVALY 299
E+ I M G+ + C++ N QIH ++V + + A+Y
Sbjct: 473 KWKESTEIRESMRDSGIEKEP--------GCSTIEVDN---QIHEFLVGDIAHPHKEAIY 521
Query: 300 NSL 302
L
Sbjct: 522 QRL 524
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 248 bits (633), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 145/468 (30%), Positives = 243/468 (51%), Gaps = 42/468 (8%)
Query: 165 SVFSACSSLLEPEYGRQIHGICAKFGLVRNVFSGCSLCDM-------YAKCGFLPSAKTA 217
++ +CSS + + IHG + L+ +VF L + L A
Sbjct: 17 ALLQSCSSFSDL---KIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGI 73
Query: 218 FYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMAL 277
F QI++P+L +N +I F+ + ++A + QM+ + PD+ITF L+ A + +
Sbjct: 74 FSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECV 133
Query: 278 NQGMQIHSYIVKVGFNKEVALYNSLLTMYT------------------------------ 307
G Q HS IV+ GF +V + NSL+ MY
Sbjct: 134 LVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGY 193
Query: 308 -KCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITI 366
KC + +A +F+ + + NL +W+ +++ ++ + LF+ M N +
Sbjct: 194 CKCGMVENAREMFDEMP-HRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVM 252
Query: 367 TNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTEN 426
+++ +CA L +LE G + + + VKS + +++ + L+DM+ +CG + A VF+
Sbjct: 253 VSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPE 312
Query: 427 PNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNL 486
+ +SWSS+I G A+ G H+A++ F +M +LG P +VT+ VLSACSH GLVE+G +
Sbjct: 313 TDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEI 372
Query: 487 YNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTLLSSCKTHG 546
Y M+++ GI P EH+ C+VD+L RAG L EAE FI K P+ LL +CK +
Sbjct: 373 YENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYK 432
Query: 547 NVDIAERAAENILKLDPSNSAALVLLSSIHASAGNWEDVAKLRKVLDD 594
N ++AER ++K+ P +S VLLS+I+A AG W+ + LR ++ +
Sbjct: 433 NTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKE 480
Score = 158 bits (400), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 101/367 (27%), Positives = 177/367 (48%), Gaps = 35/367 (9%)
Query: 11 ARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTFGSIIKACCI 70
A +F + N+ + +I +S + ++A Y QML+S +PD +TF +IKA
Sbjct: 70 AYGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSE 129
Query: 71 AGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIKDLISWSSM 130
+ +G Q H+ +++ GF + +N L+ MY N G +A A +F + +D++SW+SM
Sbjct: 130 MECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSM 189
Query: 131 IRGFTQLG--------------------------------YEIEALYLFRDMLRQGVYQP 158
+ G+ + G +E +A+ LF M R+GV
Sbjct: 190 VAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFE-KAIDLFEFMKREGVV-A 247
Query: 159 NEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAF 218
NE V+ SV S+C+ L E+G + + K + N+ G +L DM+ +CG + A F
Sbjct: 248 NETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVF 307
Query: 219 YQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALN 278
+ D +SW++II A G A++A+ F QM+ +G IP +TF ++L AC+ +
Sbjct: 308 EGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVE 367
Query: 279 QGMQIHSYIVKV-GFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSA 337
+G++I+ + K G + Y ++ M + L +A + + N A+L A
Sbjct: 368 KGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGA 427
Query: 338 CLQHKQA 344
C +K
Sbjct: 428 CKIYKNT 434
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 108/481 (22%), Positives = 203/481 (42%), Gaps = 56/481 (11%)
Query: 63 SIIKACCIAGDIYL--GRQLHAHVIKSGFGGH----LVAQNGLISMYTNFGQVAHASDVF 116
+++++C D+ + G L H+I F L + + TN + +A +F
Sbjct: 17 ALLQSCSSFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNL--LGYAYGIF 74
Query: 117 TMISIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEP 176
+ I +L ++ +IR F+ +A + ML+ ++ P+ + A S +
Sbjct: 75 SQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIW-PDNITFPFLIKASSEMECV 133
Query: 177 EYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAF 236
G Q H +FG +V+ SL MYA CGF+ +A F Q+ D+VSW +++A +
Sbjct: 134 LVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGY 193
Query: 237 ADSGDANEAISIFRQMMHI-------------------------------GLIPDSITFL 265
G A +F +M H G++ + +
Sbjct: 194 CKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMV 253
Query: 266 SLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKN 325
S++ +C AL G + + Y+VK + L +L+ M+ +C ++ A+ VFE + +
Sbjct: 254 SVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPET 313
Query: 326 ANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQV 385
+L SW++I+ H A + F QM+ P +T T +L C+ +E G ++
Sbjct: 314 DSL-SWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEI 372
Query: 386 HCFSVKS-GLVLDVSVSNGLIDMYAKCGSVIHAQR-VFDSTENPNVISWSSLIVG---YA 440
+ K G+ + ++DM + G + A+ + PN +L+ Y
Sbjct: 373 YENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYK 432
Query: 441 MSGLGHEALNLFRKMRNLGVRPNEVTYVGVLS---ACSHIGLVEEGWNLYNTMEEELGIP 497
+ + N+ K V+P Y +LS AC+ G ++ +L + M+E+L
Sbjct: 433 NTEVAERVGNMLIK-----VKPEHSGYYVLLSNIYACA--GQWDKIESLRDMMKEKLVKK 485
Query: 498 P 498
P
Sbjct: 486 P 486
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 123/242 (50%), Gaps = 15/242 (6%)
Query: 2 YGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTF 61
Y KCG +++AR++FD M RN+ +W+ MI+GY++N +A+ ++ M R G ++
Sbjct: 193 YCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVM 252
Query: 62 GSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISI 121
S+I +C G + G + + +V+KS +L+ L+ M+ G + A VF +
Sbjct: 253 VSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPE 312
Query: 122 KDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACS--SLLEP--- 176
D +SWSS+I+G G+ +A++ F M+ G + P + +V SACS L+E
Sbjct: 313 TDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLG-FIPRDVTFTAVLSACSHGGLVEKGLE 371
Query: 177 --EYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIE-SPDLVSWNAII 233
E ++ HGI + GC + DM + G L A+ ++ P+ A++
Sbjct: 372 IYENMKKDHGIEPRLE-----HYGC-IVDMLGRAGKLAEAENFILKMHVKPNAPILGALL 425
Query: 234 AA 235
A
Sbjct: 426 GA 427
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 85/332 (25%), Positives = 144/332 (43%), Gaps = 58/332 (17%)
Query: 265 LSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTM------YTKCSNLHD-ALS 317
L+LL +C+S L IH ++++ +V + + LL + + K +NL A
Sbjct: 16 LALLQSCSSFSDLKI---IHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYG 72
Query: 318 VFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELA 377
+F I +N NL +N ++ + + F + QML S P+ IT L+ +E+
Sbjct: 73 IFSQI-QNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEME 131
Query: 378 SLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIV 437
+ VG Q H V+ G DV V N L+ MYA CG + A R+F +V+SW+S++
Sbjct: 132 CVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVA 191
Query: 438 GYAMSGL-------------------------------GHEALNLFRKMRNLGVRPNEVT 466
GY G+ +A++LF M+ GV NE
Sbjct: 192 GYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETV 251
Query: 467 YVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHF-------SCMVDLLARAGCLYEA 519
V V+S+C+H+G +E G Y + + H + +VD+ R G + E
Sbjct: 252 MVSVISSCAHLGALEFGERAYEYV--------VKSHMTVNLILGTALVDMFWRCGDI-EK 302
Query: 520 ETFIRKTGFDPDITTWKTLLSSCKTHGNVDIA 551
+ + + D +W +++ HG+ A
Sbjct: 303 AIHVFEGLPETDSLSWSSIIKGLAVHGHAHKA 334
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 66/123 (53%), Gaps = 1/123 (0%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
M+ +CG ++ A VF+ + + +SW+S+I G + +G ++A+ + QM+ GF P +T
Sbjct: 293 MFWRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVT 352
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKS-GFGGHLVAQNGLISMYTNFGQVAHASDVFTMI 119
F +++ AC G + G +++ ++ K G L ++ M G++A A + +
Sbjct: 353 FTAVLSACSHGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKM 412
Query: 120 SIK 122
+K
Sbjct: 413 HVK 415
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 247 bits (631), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 147/471 (31%), Positives = 243/471 (51%), Gaps = 35/471 (7%)
Query: 159 NEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFL--PSAKT 216
E ++ S+ S + +QIHG + GL ++ + L K G P A+
Sbjct: 45 KELLVSSLISKLDDCINLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARR 104
Query: 217 AFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMA 276
++ + W A+I +A G +EAI+++ M + P S TF +LL AC +
Sbjct: 105 VIEPVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKD 164
Query: 277 LNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISK------------ 324
LN G Q H+ ++ V + N+++ MY KC ++ A VF+ + +
Sbjct: 165 LNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAA 224
Query: 325 ------------------NANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITI 366
++V+W A+++ Q+ + E F +M S + + +T+
Sbjct: 225 YARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTV 284
Query: 367 TNLLGTCAELASLEVGNQVHCFSVKSGLVLD--VSVSNGLIDMYAKCGSVIHAQRVFDST 424
+ CA+L + + ++ + KSG V + + LIDMY+KCG+V A VF S
Sbjct: 285 AGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSM 344
Query: 425 ENPNVISWSSLIVGYAMSGLGHEALNLFRKM-RNLGVRPNEVTYVGVLSACSHIGLVEEG 483
N NV ++SS+I+G A G EAL+LF M ++PN VT+VG L ACSH GLV++G
Sbjct: 345 NNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQG 404
Query: 484 WNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTLLSSCK 543
++++M + G+ P R+H++CMVDLL R G L EA I+ +P W LL +C+
Sbjct: 405 RQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACR 464
Query: 544 THGNVDIAERAAENILKLDPSNSAALVLLSSIHASAGNWEDVAKLRKVLDD 594
H N +IAE AAE++ +L+P +LLS+++ASAG+W V ++RK++ +
Sbjct: 465 IHNNPEIAEIAAEHLFELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKE 515
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 105/389 (26%), Positives = 185/389 (47%), Gaps = 38/389 (9%)
Query: 11 ARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTFGSIIKACCI 70
AR+V + + RN WT++I GY+ G+ +EA+ MY M + P TF +++KAC
Sbjct: 102 ARRVIEPVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGT 161
Query: 71 AGDIYLGRQLHAHVIK-SGF------------------------------GGHLVAQNGL 99
D+ LGRQ HA + GF +++ L
Sbjct: 162 MKDLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTEL 221
Query: 100 ISMYTNFGQVAHASDVFTMISIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPN 159
I+ Y G + A+++F + KD+++W++M+ GF Q EAL F M + G+ + +
Sbjct: 222 IAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGI-RAD 280
Query: 160 EFVLGSVFSACSSLLEPEYGRQIHGICAKFGL--VRNVFSGCSLCDMYAKCGFLPSAKTA 217
E + SAC+ L +Y + I K G +V G +L DMY+KCG + A
Sbjct: 281 EVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNV 340
Query: 218 FYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMM-HIGLIPDSITFLSLLCACTSPMA 276
F + + ++ +++++I A G A EA+ +F M+ + P+++TF+ L AC+
Sbjct: 341 FMSMNNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGL 400
Query: 277 LNQGMQIHSYIVKV-GFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAIL 335
++QG Q+ + + G Y ++ + + L +AL + + +S + W A+L
Sbjct: 401 VDQGRQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALL 460
Query: 336 SACLQHKQAGETFRLFKQMLFSENKPNMI 364
AC H E + + LF E +P++I
Sbjct: 461 GACRIHNNP-EIAEIAAEHLF-ELEPDII 487
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/344 (24%), Positives = 154/344 (44%), Gaps = 38/344 (11%)
Query: 78 RQLHAHVIKSGFGGHLVAQNGLISMYTNFG--QVAHASDVFTMISIKDLISWSSMIRGFT 135
+Q+H HV++ G LI T G +A V + ++ W+++IRG+
Sbjct: 66 KQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFRNPFLWTAVIRGYA 125
Query: 136 QLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNV 195
G EA+ ++ M ++ + P F ++ AC ++ + GRQ H + V
Sbjct: 126 IEGKFDEAIAMYGCMRKEEI-TPVSFTFSALLKACGTMKDLNLGRQFHAQTFRLRGFCFV 184
Query: 196 FSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGD-------------- 241
+ G ++ DMY KC + A+ F ++ D++SW +IAA+A G+
Sbjct: 185 YVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESLPTK 244
Query: 242 -----------------ANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIH 284
EA+ F +M G+ D +T + AC A +
Sbjct: 245 DMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRAV 304
Query: 285 SYIVKVGF--NKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHK 342
K G+ + V + ++L+ MY+KC N+ +A++VF +++ N N+ ++++++ H
Sbjct: 305 QIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMN-NKNVFTYSSMILGLATHG 363
Query: 343 QAGETFRLFKQMLF-SENKPNMITITNLLGTCAELASLEVGNQV 385
+A E LF M+ +E KPN +T L C+ ++ G QV
Sbjct: 364 RAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQV 407
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 118/238 (49%), Gaps = 4/238 (1%)
Query: 2 YGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTF 61
Y + G+M+ A ++F+++ +++V+WT+M++G++QN + EA+ + +M +SG D++T
Sbjct: 225 YARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTV 284
Query: 62 GSIIKACCIAGDIYLGRQLHAHVIKSGF--GGHLVAQNGLISMYTNFGQVAHASDVFTMI 119
I AC G + KSG+ H+V + LI MY+ G V A +VF +
Sbjct: 285 AGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSM 344
Query: 120 SIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYG 179
+ K++ ++SSMI G G EAL+LF M+ Q +PN ACS + G
Sbjct: 345 NNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQG 404
Query: 180 RQI-HGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIE-SPDLVSWNAIIAA 235
RQ+ + FG+ + D+ + G L A + P W A++ A
Sbjct: 405 RQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGA 462
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 83/178 (46%), Gaps = 35/178 (19%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQML-RSGFFPDQL 59
MY KCG++++A VF +M+ +NV +++SMI G + +G+ EA+ ++ M+ ++ P+ +
Sbjct: 327 MYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTV 386
Query: 60 TFGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMI 119
TF + AC +G + GRQ+ SMY FG V D +T
Sbjct: 387 TFVGALMACSHSGLVDQGRQV------------------FDSMYQTFG-VQPTRDHYT-- 425
Query: 120 SIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPE 177
M+ + G EAL L + M +P+ V G++ AC PE
Sbjct: 426 ---------CMVDLLGRTGRLQEALELIKTM----SVEPHGGVWGALLGACRIHNNPE 470
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 247 bits (630), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 143/392 (36%), Positives = 221/392 (56%), Gaps = 17/392 (4%)
Query: 218 FYQIESPDLVSWNAIIAAFA-DSGDANEAISIFRQMMHIGLI-PDSITFLSLLCACTSPM 275
F IE+ WN +I A A D EA ++R+M+ G PD TF +L AC
Sbjct: 106 FDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIF 165
Query: 276 ALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAIL 335
++G Q+H IVK GF +V + N L+ +Y C L A VF+ + + + LVSWN+++
Sbjct: 166 GFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERS-LVSWNSMI 224
Query: 336 SACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKS--- 392
A ++ + +LF++M S +P+ T+ ++L CA L SL +G H F ++
Sbjct: 225 DALVRFGEYDSALQLFREMQRS-FEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDV 283
Query: 393 GLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLF 452
+ +DV V N LI+MY KCGS+ A++VF + ++ SW+++I+G+A G EA+N F
Sbjct: 284 DVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFF 343
Query: 453 RKM--RNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLL 510
+M + VRPN VT+VG+L AC+H G V +G ++ M + I PA EH+ C+VDL+
Sbjct: 344 DRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLI 403
Query: 511 ARAGCLYEAETFIRKTGFDPDITTWKTLLSS-CKTHGNVDIAERAAENILKLDPSN---- 565
ARAG + EA + PD W++LL + CK +V+++E A NI+ N
Sbjct: 404 ARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESSN 463
Query: 566 ---SAALVLLSSIHASAGNWEDVAKLRKVLDD 594
S A VLLS ++ASA W DV +RK++ +
Sbjct: 464 GNCSGAYVLLSRVYASASRWNDVGIVRKLMSE 495
Score = 170 bits (430), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 107/339 (31%), Positives = 177/339 (52%), Gaps = 12/339 (3%)
Query: 11 ARQVFDAMHLRNVVSWTSMISGYSQN-GQGNEAVVMYIQMLRSG-FFPDQLTFGSIIKAC 68
A +VFD++ + W ++I + + + EA ++Y +ML G PD+ TF ++KAC
Sbjct: 102 AFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKAC 161
Query: 69 CIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIKDLISWS 128
G+Q+H ++K GFGG + NGLI +Y + G + A VF + + L+SW+
Sbjct: 162 AYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWN 221
Query: 129 SMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAK 188
SMI + G AL LFR+M R ++P+ + + SV SAC+ L G H +
Sbjct: 222 SMIDALVRFGEYDSALQLFREMQRS--FEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLR 279
Query: 189 ---FGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEA 245
+ +V SL +MY KCG L A+ F ++ DL SWNA+I FA G A EA
Sbjct: 280 KCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEA 339
Query: 246 ISIFRQMM--HIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVAL--YNS 301
++ F +M+ + P+S+TF+ LL AC +N+G Q +V+ + E AL Y
Sbjct: 340 MNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVR-DYCIEPALEHYGC 398
Query: 302 LLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQ 340
++ + + + +A+ + ++ + V W ++L AC +
Sbjct: 399 IVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCK 437
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 105/370 (28%), Positives = 175/370 (47%), Gaps = 13/370 (3%)
Query: 78 RQLHAHVIKSGFG---GHLVAQNGLISMYTNFGQVAHASDVFTMISIKDLISWSSMIRGF 134
+QLHA +++ + L ++ + ++F V +A VF I W+++IR
Sbjct: 65 KQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFDSIENHSSFMWNTLIRAC 124
Query: 135 TQ-LGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVR 193
+ + EA L+R ML +G P++ V AC+ + G+Q+H K G
Sbjct: 125 AHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGG 184
Query: 194 NVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMM 253
+V+ L +Y CG L A+ F ++ LVSWN++I A G+ + A+ +FR+M
Sbjct: 185 DVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQ 244
Query: 254 HIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVK---VGFNKEVALYNSLLTMYTKCS 310
PD T S+L AC +L+ G H+++++ V +V + NSL+ MY KC
Sbjct: 245 R-SFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCG 303
Query: 311 NLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFS-EN-KPNMITITN 368
+L A VF+ + K +L SWNA++ H +A E F +M+ EN +PN +T
Sbjct: 304 SLRMAEQVFQGMQKR-DLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVG 362
Query: 369 LLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNG-LIDMYAKCGSVIHA-QRVFDSTEN 426
LL C + G Q V+ + G ++D+ A+ G + A V
Sbjct: 363 LLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMK 422
Query: 427 PNVISWSSLI 436
P+ + W SL+
Sbjct: 423 PDAVIWRSLL 432
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 145/282 (51%), Gaps = 10/282 (3%)
Query: 277 LNQGMQIHSYIVKVGFNKEVA---LYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNA 333
++Q Q+H++ ++ + +E A LY +L + + S+++ A VF++I +++ + WN
Sbjct: 61 MSQLKQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFDSIENHSSFM-WNT 119
Query: 334 ILSACLQH-KQAGETFRLFKQML-FSENKPNMITITNLLGTCAELASLEVGNQVHCFSVK 391
++ AC + E F L+++ML E+ P+ T +L CA + G QVHC VK
Sbjct: 120 LIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVK 179
Query: 392 SGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNL 451
G DV V+NGLI +Y CG + A++VFD +++SW+S+I G AL L
Sbjct: 180 HGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQL 239
Query: 452 FRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHF--SCMVDL 509
FR+M+ P+ T VLSAC+ +G + G + + + + A + + ++++
Sbjct: 240 FREMQR-SFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEM 298
Query: 510 LARAGCLYEAETFIRKTGFDPDITTWKTLLSSCKTHGNVDIA 551
+ G L AE + D+ +W ++ THG + A
Sbjct: 299 YCKCGSLRMAEQVFQGMQ-KRDLASWNAMILGFATHGRAEEA 339
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 78/252 (30%), Positives = 123/252 (48%), Gaps = 11/252 (4%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
+YG CG + AR+VFD M R++VSW SMI + G+ + A+ ++ +M RS F PD T
Sbjct: 195 LYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQRS-FEPDGYT 253
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKS---GFGGHLVAQNGLISMYTNFGQVAHASDVFT 117
S++ AC G + LG HA +++ ++ +N LI MY G + A VF
Sbjct: 254 MQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQ 313
Query: 118 MISIKDLISWSSMIRGFTQLGYEIEALYLFRDML--RQGVYQPNEFVLGSVFSACSSLLE 175
+ +DL SW++MI GF G EA+ F M+ R+ V +PN + AC+
Sbjct: 314 GMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENV-RPNSVTFVGLLIACNHRGF 372
Query: 176 PEYGRQIHGICAKFGLVRNVFS--GCSLCDMYAKCGFLPSAKTAFYQIE-SPDLVSWNAI 232
GRQ + + + GC + D+ A+ G++ A + PD V W ++
Sbjct: 373 VNKGRQYFDMMVRDYCIEPALEHYGC-IVDLIARAGYITEAIDMVMSMPMKPDAVIWRSL 431
Query: 233 IAAFADSGDANE 244
+ A G + E
Sbjct: 432 LDACCKKGASVE 443
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 246 bits (627), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 180/597 (30%), Positives = 279/597 (46%), Gaps = 92/597 (15%)
Query: 6 GSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTFGSII 65
G M+ A+QVFDAM R+VVSW +MI GY +N EA +L FG +
Sbjct: 183 GDMEKAKQVFDAMPSRDVVSWNAMIKGYIENDGMEEA---------------KLLFGDMS 227
Query: 66 KACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIKDLI 125
+ ++V ++ Y +G V A +F + ++++
Sbjct: 228 EK------------------------NVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIV 263
Query: 126 SWSSMIRGFTQLGYEIEALYLFRDMLRQ-GVYQPNEFVLGSVFSACSSL-LE-PEYGRQI 182
SW++MI GF EAL LF +M + PN L S+ AC L +E G Q+
Sbjct: 264 SWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQL 323
Query: 183 HGICAKFGLVRNVFSG---CSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADS 239
H G G SL MYA G + SA++ ES DL S N II + +
Sbjct: 324 HAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLN--ESFDLQSCNIIINRYLKN 381
Query: 240 GDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALY 299
GD A ++F + + + D ++ +
Sbjct: 382 GDLERAETLFER---VKSLHDKVS-----------------------------------W 403
Query: 300 NSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSEN 359
S++ Y + ++ A +F+ + + + V+W ++S +Q++ E L M+
Sbjct: 404 TSMIDGYLEAGDVSRAFGLFQKL-HDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGL 462
Query: 360 KPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLD--VSVSNGLIDMYAKCGSVIHA 417
KP T + LL + ++L+ G +HC K+ D + + N L+ MYAKCG++ A
Sbjct: 463 KPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDA 522
Query: 418 QRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHI 477
+F + +SW+S+I+G + GL +ALNLF++M + G +PN VT++GVLSACSH
Sbjct: 523 YEIFAKMVQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHS 582
Query: 478 GLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKT 537
GL+ G L+ M+E I P +H+ M+DLL RAG L EAE FI F PD T +
Sbjct: 583 GLITRGLELFKAMKETYSIQPGIDHYISMIDLLGRAGKLKEAEEFISALPFTPDHTVYGA 642
Query: 538 LLSSC----KTHGNVDIAERAAENILKLDPSNSAALVLLSSIHASAGNWEDVAKLRK 590
LL C + IAERAA +L+LDP N+ V L +++A G + ++RK
Sbjct: 643 LLGLCGLNWRDKDAEGIAERAAMRLLELDPVNAPGHVALCNVYAGLGRHDMEKEMRK 699
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 109/415 (26%), Positives = 190/415 (45%), Gaps = 82/415 (19%)
Query: 1 MYGKC--GSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLR--SGFFP 56
+YG C G +++A ++F M RN+VSWT+MISG++ N EA++++++M + P
Sbjct: 238 VYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSP 297
Query: 57 DQLTFGSIIKACCIAGDIY--LGRQLHAHVIKSGFGG------------HLVAQNGLIS- 101
+ T S+ AC G + LG QLHA VI +G+ H+ A +GLI+
Sbjct: 298 NGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIAS 357
Query: 102 -------------------MYTNFGQVAHASDVFTMI-SIKDLISWSSMIRGFTQLGYEI 141
Y G + A +F + S+ D +SW+SMI G+ + G
Sbjct: 358 AQSLLNESFDLQSCNIIINRYLKNGDLERAETLFERVKSLHDKVSWTSMIDGYLEAGDVS 417
Query: 142 EALYLFR-------------------------------DMLRQGVYQPNEFVLGSVFSAC 170
A LF+ DM+R G+ +P + S+
Sbjct: 418 RAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGL-KPLNSTYSVLLSSA 476
Query: 171 SSLLEPEYGRQIHGICAKFGLV--RNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVS 228
+ + G+ IH + AK ++ SL MYAKCG + A F ++ D VS
Sbjct: 477 GATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKDTVS 536
Query: 229 WNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQI----- 283
WN++I + G A++A+++F++M+ G P+S+TFL +L AC+ + +G+++
Sbjct: 537 WNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAMK 596
Query: 284 HSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSAC 338
+Y ++ G + Y S++ + + L +A A+ + + A+L C
Sbjct: 597 ETYSIQPGIDH----YISMIDLLGRAGKLKEAEEFISALPFTPDHTVYGALLGLC 647
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 113/511 (22%), Positives = 217/511 (42%), Gaps = 48/511 (9%)
Query: 96 QNGLISMYTNFGQVAHASDVFTMI----SIKDLISWSSMIRGFTQLGYEIEALYLFRDML 151
+ LI + G + HA + I SI ++ W+S++ + + GY EA LF M
Sbjct: 45 EEALILRRLSEGGLVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMP 104
Query: 152 RQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKF-GLVRNVFSGCSLCDMYAKCGF 210
+ + N + G V C R+++ F + +NV S + G
Sbjct: 105 ERNIVTCNAMLTGYV--KC---------RRMNEAWTLFREMPKNVVSWTVMLTALCDDGR 153
Query: 211 LPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCA 270
A F ++ ++VSWN ++ +GD +A +F M D +++ +++
Sbjct: 154 SEDAVELFDEMPERNVVSWNTLVTGLIRNGDMEKAKQVFDAMPS----RDVVSWNAMIKG 209
Query: 271 CTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVS 330
N GM+ + K V + S++ Y + ++ +A +F + + N+VS
Sbjct: 210 YIE----NDGMEEAKLLFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPER-NIVS 264
Query: 331 WNAILSACLQHKQAGETFRLFKQMLFSEN--KPNMITITNLLGTCAELAS--LEVGNQVH 386
W A++S ++ E LF +M + PN T+ +L C L +G Q+H
Sbjct: 265 WTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLH 324
Query: 387 CFSVKSGLVL---DVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSG 443
+ +G D ++ L+ MYA G + AQ + + E+ ++ S + +I Y +G
Sbjct: 325 AQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLN--ESFDLQSCNIIINRYLKNG 382
Query: 444 LGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHF 503
A LF ++++L ++V++ ++ G V + L+ + ++ G+ +
Sbjct: 383 DLERAETLFERVKSL---HDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDGVT-----W 434
Query: 504 SCMVDLLARAGCLYEAETFIR---KTGFDPDITTWKTLLSSCKTHGNVDIAERAAENILK 560
+ M+ L + EA + + + G P +T+ LLSS N+D + I K
Sbjct: 435 TVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAK 494
Query: 561 LDPSNSAALVL---LSSIHASAGNWEDVAKL 588
L+L L S++A G ED ++
Sbjct: 495 TTACYDPDLILQNSLVSMYAKCGAIEDAYEI 525
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 245 bits (625), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 133/396 (33%), Positives = 222/396 (56%), Gaps = 4/396 (1%)
Query: 200 SLCDMYAKCGFLPSAKTAFYQIESPDLVS---WNAIIAAFADSGDANEAISIFRQMMHIG 256
L +++ C L A+ F + L++ W A+ ++ +G +A+ ++ M+
Sbjct: 172 KLITLFSVCRRLDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCSF 231
Query: 257 LIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDAL 316
+ P + + L AC L G IH+ IVK + +YN LL +Y + DA
Sbjct: 232 IEPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDAR 291
Query: 317 SVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAEL 376
VF+ +S+ N+V+WN+++S + + E F LF++M + T+T +L C+ +
Sbjct: 292 KVFDGMSER-NVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRV 350
Query: 377 ASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLI 436
A+L G ++H +KS DV + N L+DMY KCG V +++RVFD ++ SW+ ++
Sbjct: 351 AALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIML 410
Query: 437 VGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGI 496
YA++G E +NLF M GV P+ +T+V +LS CS GL E G +L+ M+ E +
Sbjct: 411 NCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRV 470
Query: 497 PPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTLLSSCKTHGNVDIAERAAE 556
PA EH++C+VD+L RAG + EA I F P + W +LL+SC+ HGNV + E AA+
Sbjct: 471 SPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLHGNVSVGEIAAK 530
Query: 557 NILKLDPSNSAALVLLSSIHASAGNWEDVAKLRKVL 592
+ L+P N V++S+I+A A W++V K+R+++
Sbjct: 531 ELFVLEPHNPGNYVMVSNIYADAKMWDNVDKIREMM 566
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 101/376 (26%), Positives = 185/376 (49%), Gaps = 9/376 (2%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVS---WTSMISGYSQNGQGNEAVVMYIQMLRSGFFPD 57
++ C + AR++FD + ++++ W +M GYS+NG +A+++Y+ ML S P
Sbjct: 176 LFSVCRRLDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCSFIEPG 235
Query: 58 QLTFGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFT 117
+ +KAC D+ +GR +HA ++K V N L+ +Y G A VF
Sbjct: 236 NFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFD 295
Query: 118 MISIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPE 177
+S +++++W+S+I ++ E LFR M ++ + + L ++ ACS +
Sbjct: 296 GMSERNVVTWNSLISVLSKKVRVHEMFNLFRKM-QEEMIGFSWATLTTILPACSRVAALL 354
Query: 178 YGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFA 237
G++IH K +V SL DMY KCG + ++ F + + DL SWN ++ +A
Sbjct: 355 TGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYA 414
Query: 238 DSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVA 297
+G+ E I++F M+ G+ PD ITF++LL C+ G+ + + K F A
Sbjct: 415 INGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERM-KTEFRVSPA 473
Query: 298 L--YNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQML 355
L Y L+ + + + +A+ V E + + W ++L++C H K++
Sbjct: 474 LEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLHGNVSVGEIAAKELF 533
Query: 356 FSE--NKPNMITITNL 369
E N N + ++N+
Sbjct: 534 VLEPHNPGNYVMVSNI 549
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 138/293 (47%), Gaps = 13/293 (4%)
Query: 264 FLSLLCACTSPMALNQGMQIHSYIVK-VGFNKEVALYNSLLTMYTKCSNLHDALSVFEAI 322
+ LL AC S +L+ G++I S I+ L + L+T+++ C L A +F+ +
Sbjct: 134 YTDLLHACISAKSLHHGIKICSLILNNPSLRHNPKLLSKLITLFSVCRRLDLARKIFDDV 193
Query: 323 SKNANLVS--WNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLE 380
+ ++ L W A+ ++ + ++ ML S +P +I+ L C +L L
Sbjct: 194 TDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGNFSISVALKACVDLKDLR 253
Query: 381 VGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYA 440
VG +H VK +D V N L+ +Y + G A++VFD NV++W+SLI +
Sbjct: 254 VGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLISVLS 313
Query: 441 MSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTM---EEELGIP 497
HE NLFRKM+ + + T +L ACS + + G ++ + +E+ +P
Sbjct: 314 KKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVP 373
Query: 498 PAREHFSCMVDLLARAGCL-YEAETFIRKTGFDPDITTWKTLLSSCKTHGNVD 549
+ ++D+ + G + Y F D+ +W +L+ +GN++
Sbjct: 374 ----LLNSLMDMYGKCGEVEYSRRVF--DVMLTKDLASWNIMLNCYAINGNIE 420
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 244 bits (624), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 130/376 (34%), Positives = 215/376 (57%), Gaps = 5/376 (1%)
Query: 218 FYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMAL 277
F + PD +N++I + + ++ +R+M+ + P + TF S++ +C AL
Sbjct: 64 FLSVPLPDDFLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSAL 123
Query: 278 NQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSA 337
G +H + V GF + + +L+T Y+KC ++ A VF+ + + + +V+WN+++S
Sbjct: 124 RIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKS-IVAWNSLVSG 182
Query: 338 CLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLD 397
Q+ A E ++F QM S +P+ T +LL CA+ ++ +G+ VH + + GL L+
Sbjct: 183 FEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLN 242
Query: 398 VSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRN 457
V + LI++Y++CG V A+ VFD + NV +W+++I Y G G +A+ LF KM +
Sbjct: 243 VKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMED 302
Query: 458 -LGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCL 516
G PN VT+V VLSAC+H GLVEEG ++Y M + + P EH CMVD+L RAG L
Sbjct: 303 DCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFL 362
Query: 517 YEAETFIRK---TGFDPDITTWKTLLSSCKTHGNVDIAERAAENILKLDPSNSAALVLLS 573
EA FI + TG W +L +CK H N D+ A+ ++ L+P N V+LS
Sbjct: 363 DEAYKFIHQLDATGKATAPALWTAMLGACKMHRNYDLGVEIAKRLIALEPDNPGHHVMLS 422
Query: 574 SIHASAGNWEDVAKLR 589
+I+A +G ++V+ +R
Sbjct: 423 NIYALSGKTDEVSHIR 438
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 100/342 (29%), Positives = 177/342 (51%), Gaps = 14/342 (4%)
Query: 78 RQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIKDLISWSSMIRGFTQL 137
+Q+HAH+I +G+G LI++ + +A+ +F + + D ++S+I+ ++L
Sbjct: 26 QQVHAHLIVTGYGRSRSLLTKLITLACSARAIAYTHLLFLSVPLPDDFLFNSVIKSTSKL 85
Query: 138 GYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIH--GICAKFGLVRNV 195
+ + +R ML V P+ + SV +C+ L G+ +H + + FGL +
Sbjct: 86 RLPLHCVAYYRRMLSSNV-SPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGL--DT 142
Query: 196 FSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHI 255
+ +L Y+KCG + A+ F ++ +V+WN++++ F +G A+EAI +F QM
Sbjct: 143 YVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRES 202
Query: 256 GLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDA 315
G PDS TF+SLL AC A++ G +H YI+ G + V L +L+ +Y++C ++ A
Sbjct: 203 GFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKA 262
Query: 316 LSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENK----PNMITITNLLG 371
VF+ + K N+ +W A++SA H + LF +M E+ PN +T +L
Sbjct: 263 REVFDKM-KETNVAAWTAMISAYGTHGYGQQAVELFNKM---EDDCGPIPNNVTFVAVLS 318
Query: 372 TCAELASLEVGNQVHCFSVKS-GLVLDVSVSNGLIDMYAKCG 412
CA +E G V+ KS L+ V ++DM + G
Sbjct: 319 ACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAG 360
Score = 148 bits (374), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 90/334 (26%), Positives = 167/334 (50%), Gaps = 8/334 (2%)
Query: 43 VVMYIQMLRSGFFPDQLTFGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISM 102
V Y +ML S P TF S+IK+C + +G+ +H H + SGFG Q L++
Sbjct: 92 VAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQAALVTF 151
Query: 103 YTNFGQVAHASDVFTMISIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFV 162
Y+ G + A VF + K +++W+S++ GF Q G EA+ +F M R+ ++P+
Sbjct: 152 YSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQM-RESGFEPDSAT 210
Query: 163 LGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIE 222
S+ SAC+ G +H GL NV G +L ++Y++CG + A+ F +++
Sbjct: 211 FVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMK 270
Query: 223 SPDLVSWNAIIAAFADSGDANEAISIFRQMM-HIGLIPDSITFLSLLCACTSPMALNQGM 281
++ +W A+I+A+ G +A+ +F +M G IP+++TF+++L AC + +G
Sbjct: 271 ETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGR 330
Query: 282 QIHSYIVK-VGFNKEVALYNSLLTMYTKCSNLHDA---LSVFEAISKNANLVSWNAILSA 337
++ + K V + ++ M + L +A + +A K W A+L A
Sbjct: 331 SVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKATAPALWTAMLGA 390
Query: 338 CLQHKQAGETFRLFKQM--LFSENKPNMITITNL 369
C H+ + K++ L +N + + ++N+
Sbjct: 391 CKMHRNYDLGVEIAKRLIALEPDNPGHHVMLSNI 424
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 84/265 (31%), Positives = 139/265 (52%), Gaps = 7/265 (2%)
Query: 2 YGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTF 61
Y KCG M+ ARQVFD M +++V+W S++SG+ QNG +EA+ ++ QM SGF PD TF
Sbjct: 152 YSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATF 211
Query: 62 GSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISI 121
S++ AC G + LG +H ++I G ++ LI++Y+ G V A +VF +
Sbjct: 212 VSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMKE 271
Query: 122 KDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQ 181
++ +W++MI + GY +A+ LF M PN +V SAC+ E GR
Sbjct: 272 TNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRS 331
Query: 182 IHGICAK-FGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVS----WNAIIAAF 236
++ K + L+ V + DM + GFL A +Q+++ + W A++ A
Sbjct: 332 VYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKATAPALWTAMLGAC 391
Query: 237 ADSGDANEAISIFRQMMHIGLIPDS 261
+ + + I +++ I L PD+
Sbjct: 392 KMHRNYDLGVEIAKRL--IALEPDN 414
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 85/326 (26%), Positives = 171/326 (52%), Gaps = 13/326 (3%)
Query: 277 LNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILS 336
+ Q Q+H++++ G+ + +L L+T+ + +F ++ + + +N+++
Sbjct: 22 VKQLQQVHAHLIVTGYGRSRSLLTKLITLACSARAIAYTHLLFLSVPLPDDFL-FNSVIK 80
Query: 337 ACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVL 396
+ + + +++ML S P+ T T+++ +CA+L++L +G VHC +V SG L
Sbjct: 81 STSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGL 140
Query: 397 DVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMR 456
D V L+ Y+KCG + A++VFD ++++W+SL+ G+ +GL EA+ +F +MR
Sbjct: 141 DTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMR 200
Query: 457 NLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCL 516
G P+ T+V +LSAC+ G V G ++ + E G+ + + +++L +R G +
Sbjct: 201 ESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISE-GLDLNVKLGTALINLYSRCGDV 259
Query: 517 YEAETFIRKTGFDPDITTWKTLLSSCKTHGNVDIAERAAENILKLD------PSNSAALV 570
+A K + ++ W ++S+ THG ++A E K++ P+N +
Sbjct: 260 GKAREVFDKMK-ETNVAAWTAMISAYGTHG---YGQQAVELFNKMEDDCGPIPNNVTFVA 315
Query: 571 LLSSIHASAGNWEDVAKLRKVLDDGY 596
+LS+ A AG E+ + K + Y
Sbjct: 316 VLSAC-AHAGLVEEGRSVYKRMTKSY 340
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRS-GFFPDQL 59
+Y +CG + AR+VFD M NV +WT+MIS Y +G G +AV ++ +M G P+ +
Sbjct: 252 LYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNV 311
Query: 60 TFGSIIKACCIAGDIYLGRQLHAHVIKS 87
TF +++ AC AG + GR ++ + KS
Sbjct: 312 TFVAVLSACAHAGLVEEGRSVYKRMTKS 339
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 243 bits (620), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 126/366 (34%), Positives = 203/366 (55%), Gaps = 3/366 (0%)
Query: 229 WNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIV 288
WN I+ ++ +AI ++ M+ ++PD + ++ A G ++HS V
Sbjct: 85 WNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKELHSVAV 144
Query: 289 KVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETF 348
++GF + + +T+Y K +A VF+ + L SWNAI+ +A E
Sbjct: 145 RLGFVGDEFCESGFITLYCKAGEFENARKVFDE-NPERKLGSWNAIIGGLNHAGRANEAV 203
Query: 349 RLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVH--CFSVKSGLVLDVSVSNGLID 406
+F M S +P+ T+ ++ +C L L + Q+H K+ D+ + N LID
Sbjct: 204 EMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLID 263
Query: 407 MYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVT 466
MY KCG + A +F+ NV+SWSS+IVGYA +G EAL FR+MR GVRPN++T
Sbjct: 264 MYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKIT 323
Query: 467 YVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKT 526
+VGVLSAC H GLVEEG + M+ E + P H+ C+VDLL+R G L EA+ + +
Sbjct: 324 FVGVLSACVHGGLVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEM 383
Query: 527 GFDPDITTWKTLLSSCKTHGNVDIAERAAENILKLDPSNSAALVLLSSIHASAGNWEDVA 586
P++ W L+ C+ G+V++AE A +++L+P N V+L++++A G W+DV
Sbjct: 384 PMKPNVMVWGCLMGGCEKFGDVEMAEWVAPYMVELEPWNDGVYVVLANVYALRGMWKDVE 443
Query: 587 KLRKVL 592
++RK++
Sbjct: 444 RVRKLM 449
Score = 162 bits (411), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 93/317 (29%), Positives = 168/317 (52%), Gaps = 6/317 (1%)
Query: 26 WTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTFGSIIKACCIAGDIYLGRQLHAHVI 85
W +++ Y ++ +A+ +Y+ M+RS PD+ + +IKA D LG++LH+ +
Sbjct: 85 WNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKELHSVAV 144
Query: 86 KSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIKDLISWSSMIRGFTQLGYEIEALY 145
+ GF G ++G I++Y G+ +A VF + L SW+++I G G EA+
Sbjct: 145 RLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVE 204
Query: 146 LFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHG--ICAKFGLVRNVFSGCSLCD 203
+F DM R G+ +P++F + SV ++C L + Q+H + AK ++ SL D
Sbjct: 205 MFVDMKRSGL-EPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLID 263
Query: 204 MYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSIT 263
MY KCG + A F ++ ++VSW+++I +A +G+ EA+ FRQM G+ P+ IT
Sbjct: 264 MYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKIT 323
Query: 264 FLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVAL--YNSLLTMYTKCSNLHDALSVFEA 321
F+ +L AC + +G + + ++K F E L Y ++ + ++ L +A V E
Sbjct: 324 FVGVLSACVHGGLVEEG-KTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEE 382
Query: 322 ISKNANLVSWNAILSAC 338
+ N++ W ++ C
Sbjct: 383 MPMKPNVMVWGCLMGGC 399
Score = 125 bits (314), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 82/256 (32%), Positives = 129/256 (50%), Gaps = 19/256 (7%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
+Y K G ++AR+VFD R + SW ++I G + G+ NEAV M++ M RSG PD T
Sbjct: 161 LYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDFT 220
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVI--KSGFGGHLVAQNGLISMYTNFGQVAHASDVFTM 118
S+ +C GD+ L QLH V+ K+ ++ N LI MY G++ AS +F
Sbjct: 221 MVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEE 280
Query: 119 ISIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEY 178
+ ++++SWSSMI G+ G +EAL FR M GV +PN+ V SAC +
Sbjct: 281 MRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGV-RPNKITFVGVLSACV------H 333
Query: 179 GRQIHGICAKFGLVRNVFS--------GCSLCDMYAKCGFLPSAKTAFYQIE-SPDLVSW 229
G + F ++++ F GC + D+ ++ G L AK ++ P+++ W
Sbjct: 334 GGLVEEGKTYFAMMKSEFELEPGLSHYGC-IVDLLSRDGQLKEAKKVVEEMPMKPNVMVW 392
Query: 230 NAIIAAFADSGDANEA 245
++ GD A
Sbjct: 393 GCLMGGCEKFGDVEMA 408
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 242 bits (618), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 161/497 (32%), Positives = 245/497 (49%), Gaps = 56/497 (11%)
Query: 142 EALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFSGC-- 199
E L+ M+R V P+ + A S L E +QIH + SGC
Sbjct: 116 ECFGLYSSMIRHRV-SPDRQTFLYLMKASSFLSEV---KQIH--------CHIIVSGCLS 163
Query: 200 -------SLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQM 252
SL Y + G A+ F ++ PD+ S+N +I +A G + EA+ ++ +M
Sbjct: 164 LGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKM 223
Query: 253 MHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVG--FNKEVALYNSLLTMYTKCS 310
+ G+ PD T LSLL C + G +H +I + G ++ + L N+LL MY KC
Sbjct: 224 VSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCK 283
Query: 311 NLHDALSVFEAISKN------------------------------ANLVSWNAILSACLQ 340
A F+A+ K +LVSWN++L +
Sbjct: 284 ESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSK 343
Query: 341 HKQAGETFR-LFKQMLFSEN-KPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDV 398
T R LF +M E KP+ +T+ +L+ A L G VH ++ L D
Sbjct: 344 KGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDA 403
Query: 399 SVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNL 458
+S+ LIDMY KCG + A VF + +V W+S+I G A G G +AL LF +M+
Sbjct: 404 FLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEE 463
Query: 459 GVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYE 518
GV PN VT + VL+ACSH GLVEEG +++N M+++ G P EH+ +VDLL RAG + E
Sbjct: 464 GVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEE 523
Query: 519 AETFI-RKTGFDPDITTWKTLLSSCKTHGNVDIAERAAENILKLDPSNSAALVLLSSIHA 577
A+ + +K P + W ++LS+C+ +++ AE A +LKL+P VLLS+I+A
Sbjct: 524 AKDIVQKKMPMRPSQSMWGSILSACRGGEDIETAELALTELLKLEPEKEGGYVLLSNIYA 583
Query: 578 SAGNWEDVAKLRKVLDD 594
+ G W K R+ +++
Sbjct: 584 TVGRWGYSDKTREAMEN 600
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 118/458 (25%), Positives = 206/458 (44%), Gaps = 54/458 (11%)
Query: 22 NVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTFGSIIKACCIAGDIYLGRQLH 81
NV + +MIS S + NE +Y M+R PD+ TF ++KA ++ +Q+H
Sbjct: 99 NVFVYNTMISAVSSSK--NECFGLYSSMIRHRVSPDRQTFLYLMKASSFLSEV---KQIH 153
Query: 82 AHVIKSG---FGGHLVAQNGLISMYTNFGQVAHASDVFTMISIKDLISWSSMIRGFTQLG 138
H+I SG G +L N L+ Y G A VF + D+ S++ MI G+ + G
Sbjct: 154 CHIIVSGCLSLGNYL--WNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQG 211
Query: 139 YEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLV--RNVF 196
+ +EAL L+ M+ G+ +P+E+ + S+ C L + G+ +HG + G V N+
Sbjct: 212 FSLEALKLYFKMVSDGI-EPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLI 270
Query: 197 SGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIG 256
+L DMY KC AK AF ++ D+ SWN ++ F GD A ++F QM
Sbjct: 271 LSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRD 330
Query: 257 LI---------------------------------PDSITFLSLLCACTSPMALNQGMQI 283
L+ PD +T +SL+ + L+ G +
Sbjct: 331 LVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWV 390
Query: 284 HSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQ 343
H ++++ + L ++L+ MY KC + A VF+ ++ ++ W ++++ H
Sbjct: 391 HGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEK-DVALWTSMITGLAFHGN 449
Query: 344 AGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFS---VKSGLVLDVSV 400
+ +LF +M PN +T+ +L C+ +E G +H F+ K G +
Sbjct: 450 GQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEG--LHVFNHMKDKFGFDPETEH 507
Query: 401 SNGLIDMYAKCGSVIHAQRVFDST--ENPNVISWSSLI 436
L+D+ + G V A+ + P+ W S++
Sbjct: 508 YGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSIL 545
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 99/373 (26%), Positives = 177/373 (47%), Gaps = 36/373 (9%)
Query: 2 YGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTF 61
Y + G+ A +VF M +V S+ MI GY++ G EA+ +Y +M+ G PD+ T
Sbjct: 176 YMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTV 235
Query: 62 GSIIKACCIAGDIYLGRQLHAHVIKSG--FGGHLVAQNGLISMYTNFGQVAHASDVFTMI 119
S++ C DI LG+ +H + + G + +L+ N L+ MY + A F +
Sbjct: 236 LSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAM 295
Query: 120 SIKDLISWSSMIRGFTQLGYEIEALYLFRDM------------------------LRQGV 155
KD+ SW++M+ GF +LG A +F M +R+
Sbjct: 296 KKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELF 355
Query: 156 YQ--------PNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAK 207
Y+ P+ + S+ S ++ E +GR +HG+ + L + F +L DMY K
Sbjct: 356 YEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCK 415
Query: 208 CGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSL 267
CG + A F D+ W ++I A G+ +A+ +F +M G+ P+++T L++
Sbjct: 416 CGIIERAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAV 475
Query: 268 LCACTSPMALNQGMQIHSYIV-KVGFNKEVALYNSLLTMYTKCSNLHDALSVFE-AISKN 325
L AC+ + +G+ + +++ K GF+ E Y SL+ + + + +A + + +
Sbjct: 476 LTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAKDIVQKKMPMR 535
Query: 326 ANLVSWNAILSAC 338
+ W +ILSAC
Sbjct: 536 PSQSMWGSILSAC 548
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 103/419 (24%), Positives = 194/419 (46%), Gaps = 55/419 (13%)
Query: 223 SPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQ 282
+P++ +N +I+A + S NE ++ M+ + PD TFL L+ A + L++ Q
Sbjct: 97 NPNVFVYNTMISAVSSS--KNECFGLYSSMIRHRVSPDRQTFLYLMKASS---FLSEVKQ 151
Query: 283 IHSYIVKVG-FNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQH 341
IH +I+ G + L+NSL+ Y + N A VF A + ++ S+N ++ +
Sbjct: 152 IHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVF-ARMPHPDVSSFNVMIVGYAKQ 210
Query: 342 KQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVL--DVS 399
+ E +L+ +M+ +P+ T+ +LL C L+ + +G VH + + G V ++
Sbjct: 211 GFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLI 270
Query: 400 VSNGLIDMYAKC-------------------------------GSVIHAQRVFDSTENPN 428
+SN L+DMY KC G + AQ VFD +
Sbjct: 271 LSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRD 330
Query: 429 VISWSSLIVGYAMSGLGHEALN-LFRKMRNL-GVRPNEVTYVGVLSACSHIGLVEEGWNL 486
++SW+SL+ GY+ G + LF +M + V+P+ VT V ++S ++ G + G +
Sbjct: 331 LVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWV 390
Query: 487 YNTMEEELGIPPAREHF--SCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTLLSSCKT 544
+ + + + + F S ++D+ + G + E + KT + D+ W ++++
Sbjct: 391 HGLV---IRLQLKGDAFLSSALIDMYCKCGII-ERAFMVFKTATEKDVALWTSMITGLAF 446
Query: 545 HGN----VDIAERAAENILKLDPSNSAALVLLSSIHASAGNWEDVAKLRKVLDD-GYDP 598
HGN + + R E + P+N L +L++ S E + + D G+DP
Sbjct: 447 HGNGQQALQLFGRMQEE--GVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDP 503
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 113/247 (45%), Gaps = 6/247 (2%)
Query: 4 KCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAV--VMYIQMLRSGFFPDQLTF 61
+ G M+ A+ VFD M R++VSW S++ GYS+ G V + Y + PD++T
Sbjct: 312 RLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTM 371
Query: 62 GSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISI 121
S+I G++ GR +H VI+ G + LI MY G + A VF +
Sbjct: 372 VSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATE 431
Query: 122 KDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQ 181
KD+ W+SMI G G +AL LF M +GV PN L +V +ACS E G
Sbjct: 432 KDVALWTSMITGLAFHGNGQQALQLFGRMQEEGV-TPNNVTLLAVLTACSHSGLVEEGLH 490
Query: 182 I-HGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQ--IESPDLVSWNAIIAAFAD 238
+ + + KFG SL D+ + G + AK + P W +I++A
Sbjct: 491 VFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSILSACRG 550
Query: 239 SGDANEA 245
D A
Sbjct: 551 GEDIETA 557
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 144/306 (47%), Gaps = 21/306 (6%)
Query: 265 LSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLL--TMYTKCSNLHDALSVFEAI 322
L LL C S NQ Q+ + I++ + + L+ + T NL A +F
Sbjct: 38 LVLLENCNSR---NQFKQVLAQIMRFNLICDTFPMSRLIFFSAITYPENLDLAKLLFLNF 94
Query: 323 SKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVG 382
+ N N+ +N ++SA K E F L+ M+ P+ T L+ + L+ ++
Sbjct: 95 TPNPNVFVYNTMISAVSSSKN--ECFGLYSSMIRHRVSPDRQTFLYLMKASSFLSEVK-- 150
Query: 383 NQVHCFSVKSG-LVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAM 441
Q+HC + SG L L + N L+ Y + G+ A++VF +P+V S++ +IVGYA
Sbjct: 151 -QIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAK 209
Query: 442 SGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPARE 501
G EAL L+ KM + G+ P+E T + +L C H+ + G ++ +E + +
Sbjct: 210 QGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNL 269
Query: 502 HFS-CMVDLLARAGCLYEAETFIRKTGFD----PDITTWKTLLSSCKTHGNVDIAERAAE 556
S ++D+ + E+ + K FD D+ +W T++ G+++ A+ +
Sbjct: 270 ILSNALLDMYFKC-----KESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFD 324
Query: 557 NILKLD 562
+ K D
Sbjct: 325 QMPKRD 330
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 60/116 (51%), Gaps = 1/116 (0%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
MY KCG ++ A VF ++V WTSMI+G + +G G +A+ ++ +M G P+ +T
Sbjct: 412 MYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVT 471
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVI-KSGFGGHLVAQNGLISMYTNFGQVAHASDV 115
+++ AC +G + G + H+ K GF L+ + G+V A D+
Sbjct: 472 LLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAKDI 527
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 242 bits (618), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 161/575 (28%), Positives = 284/575 (49%), Gaps = 47/575 (8%)
Query: 25 SWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTFGSIIKACCIAGDIYLGRQLHAHV 84
SW++++ ++ G + ++++ G PD +++ G + L RQLH +V
Sbjct: 23 SWSTIVPALARFGSIG-VLRAAVELINDGEKPDASPLVHLLRVSGNYGYVSLCRQLHGYV 81
Query: 85 IKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIKDLISWSSMIRGFTQLGYEIEAL 144
K GF + N L+ Y + A VF + D+ISW+S++ G+ Q G E +
Sbjct: 82 TKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGI 141
Query: 145 YLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVR-NVFSGCSLCD 203
LF ++ R V+ PNEF + +AC+ L G IH K GL + NV G L D
Sbjct: 142 CLFLELHRSDVF-PNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLID 200
Query: 204 MYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSIT 263
MY KCGF+ A F +E D VSWNAI+A+ + +G + F QM + PD++T
Sbjct: 201 MYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQMPN----PDTVT 256
Query: 264 FLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAIS 323
YN L+ + K + ++A V +
Sbjct: 257 -----------------------------------YNELIDAFVKSGDFNNAFQVLSDMP 281
Query: 324 KNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGN 383
N N SWN IL+ + +++GE F +M S + + +++ +L A LA + G+
Sbjct: 282 -NPNSSSWNTILTGYVNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAAVAALAVVPWGS 340
Query: 384 QVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSG 443
+H + K GL V V++ LIDMY+KCG + HA+ +F + N+I W+ +I GYA +G
Sbjct: 341 LIHACAHKLGLDSRVVVASALIDMYSKCGMLKHAELMFWTMPRKNLIVWNEMISGYARNG 400
Query: 444 LGHEALNLFRKMRNLG-VRPNEVTYVGVLSACSHIGL-VEEGWNLYNTMEEELGIPPARE 501
EA+ LF +++ ++P+ T++ +L+ CSH + +E + M E I P+ E
Sbjct: 401 DSIEAIKLFNQLKQERFLKPDRFTFLNLLAVCSHCEVPMEVMLGYFEMMINEYRIKPSVE 460
Query: 502 HFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTLLSSCKTHGNVDIAERAAENILKL 561
H ++ + + G +++A+ I++ GF D W+ LL +C ++ A+ A +++L
Sbjct: 461 HCCSLIRAMGQRGEVWQAKQVIQEFGFGYDGVAWRALLGACSARKDLKAAKTVAAKMIEL 520
Query: 562 DPSNSAA--LVLLSSIHASAGNWEDVAKLRKVLDD 594
++ +++S+++A W +V ++RK++ +
Sbjct: 521 GDADKDEYLYIVMSNLYAYHERWREVGQIRKIMRE 555
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 128/485 (26%), Positives = 207/485 (42%), Gaps = 82/485 (16%)
Query: 2 YGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTF 61
Y S++DA +VFD M +V+SW S++SGY Q+G+ E + +++++ RS FP++ +F
Sbjct: 100 YKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGICLFLELHRSDVFPNEFSF 159
Query: 62 GSIIKACCIAGDIYLGRQLHAHVIKSGF-GGHLVAQNGLISMYTNFGQVAHASDVFTMIS 120
+ + AC LG +H+ ++K G G++V N LI MY G + A VF +
Sbjct: 160 TAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHME 219
Query: 121 IKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFV--------LGSVFSACSS 172
KD +SW++++ ++ G L+ F M NE + + F S
Sbjct: 220 EKDTVSWNAIVASCSRNGKLELGLWFFHQMPNPDTVTYNELIDAFVKSGDFNNAFQVLSD 279
Query: 173 LLEP------------------------------------EYGRQI-------------- 182
+ P EY I
Sbjct: 280 MPNPNSSSWNTILTGYVNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAAVAALAVVPWG 339
Query: 183 ---HGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADS 239
H K GL V +L DMY+KCG L A+ F+ + +L+ WN +I+ +A +
Sbjct: 340 SLIHACAHKLGLDSRVVVASALIDMYSKCGMLKHAELMFWTMPRKNLIVWNEMISGYARN 399
Query: 240 GDANEAISIFRQMMHIGLI-PDSITFLSLLCACTS---PMALNQG---MQIHSYIVKVGF 292
GD+ EAI +F Q+ + PD TFL+LL C+ PM + G M I+ Y +K
Sbjct: 400 GDSIEAIKLFNQLKQERFLKPDRFTFLNLLAVCSHCEVPMEVMLGYFEMMINEYRIK--- 456
Query: 293 NKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFK 352
V SL+ + + A V + + V+W A+L AC K +
Sbjct: 457 -PSVEHCCSLIRAMGQRGEVWQAKQVIQEFGFGYDGVAWRALLGACSARKDLKAAKTVAA 515
Query: 353 QML----FSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMY 408
+M+ +++ I ++NL EVG Q+ +SG++ +V S ID
Sbjct: 516 KMIELGDADKDEYLYIVMSNLYAYHERWR--EVG-QIRKIMRESGVLKEVGSS--WIDSR 570
Query: 409 AKCGS 413
KC S
Sbjct: 571 TKCSS 575
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 118/239 (49%), Gaps = 4/239 (1%)
Query: 314 DALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTC 373
+A + + A+ SW+ I+ A + G R +++ KP+ + +LL
Sbjct: 7 NAFTTRSHVGSTASSNSWSTIVPALARFGSIG-VLRAAVELINDGEKPDASPLVHLLRVS 65
Query: 374 AELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWS 433
+ + Q+H + K G V + +SN L+ Y S+ A +VFD +P+VISW+
Sbjct: 66 GNYGYVSLCRQLHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWN 125
Query: 434 SLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEE 493
SL+ GY SG E + LF ++ V PNE ++ L+AC+ + L G +++ + +
Sbjct: 126 SLVSGYVQSGRFQEGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKL-VK 184
Query: 494 LGIPPAREHF-SCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTLLSSCKTHGNVDIA 551
LG+ +C++D+ + G + +A + + + D +W +++SC +G +++
Sbjct: 185 LGLEKGNVVVGNCLIDMYGKCGFMDDA-VLVFQHMEEKDTVSWNAIVASCSRNGKLELG 242
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 43/69 (62%), Gaps = 1/69 (1%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFF-PDQL 59
MY KCG +K A +F M +N++ W MISGY++NG EA+ ++ Q+ + F PD+
Sbjct: 364 MYSKCGMLKHAELMFWTMPRKNLIVWNEMISGYARNGDSIEAIKLFNQLKQERFLKPDRF 423
Query: 60 TFGSIIKAC 68
TF +++ C
Sbjct: 424 TFLNLLAVC 432
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 240 bits (612), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 124/372 (33%), Positives = 210/372 (56%), Gaps = 14/372 (3%)
Query: 230 NAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALN----QGMQIHS 285
N + + +SG+ +A+ FR P + S+L A A G QIH+
Sbjct: 32 NHTLKQYLESGEPIKALLDFRHRFRQS--PSFVDSFSVLFAIKVSSAQKASSLDGRQIHA 89
Query: 286 YIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAG 345
+ K+GFN + + SL+ Y+ ++ A VF+ + N+V W A++SA +++ +
Sbjct: 90 LVRKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSV 149
Query: 346 ETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSG--LVLDVSVSNG 403
E LFK+M + + + + +T L CA+L ++++G +++ S+K L +D+++ N
Sbjct: 150 EAIELFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNS 209
Query: 404 LIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLG---- 459
L++MY K G A+++FD + +V +++S+I GYA++G E+L LF+KM+ +
Sbjct: 210 LLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQD 269
Query: 460 --VRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLY 517
+ PN+VT++GVL ACSH GLVEEG + +M + + P HF CMVDL R+G L
Sbjct: 270 TVITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLK 329
Query: 518 EAETFIRKTGFDPDITTWKTLLSSCKTHGNVDIAERAAENILKLDPSNSAALVLLSSIHA 577
+A FI + P+ W+TLL +C HGNV++ E I +LD + V LS+I+A
Sbjct: 330 DAHEFINQMPIKPNTVIWRTLLGACSLHGNVELGEEVQRRIFELDRDHVGDYVALSNIYA 389
Query: 578 SAGNWEDVAKLR 589
S G W++ +K+R
Sbjct: 390 SKGMWDEKSKMR 401
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 154/324 (47%), Gaps = 13/324 (4%)
Query: 30 ISGYSQNGQGNEAVVMYIQMLR-SGFFPDQLTFGSIIKACCIAGDIYL-GRQLHAHVIKS 87
+ Y ++G+ +A++ + R S F D + IK L GRQ+HA V K
Sbjct: 35 LKQYLESGEPIKALLDFRHRFRQSPSFVDSFSVLFAIKVSSAQKASSLDGRQIHALVRKL 94
Query: 88 GFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIK-DLISWSSMIRGFTQLGYEIEALYL 146
GF + Q L+ Y++ G V +A VF K +++ W++MI +T+ +EA+ L
Sbjct: 95 GFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIEL 154
Query: 147 FRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIH--GICAKFGLVRNVFSGCSLCDM 204
F+ M + + + + ++ SAC+ L + G +I+ I K L ++ SL +M
Sbjct: 155 FKRMEAEKI-ELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNM 213
Query: 205 YAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIG------LI 258
Y K G A+ F + D+ ++ ++I +A +G A E++ +F++M I +
Sbjct: 214 YVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVIT 273
Query: 259 PDSITFLSLLCACTSPMALNQGMQ-IHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALS 317
P+ +TF+ +L AC+ + +G + S I+ A + ++ ++ + +L DA
Sbjct: 274 PNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHE 333
Query: 318 VFEAISKNANLVSWNAILSACLQH 341
+ N V W +L AC H
Sbjct: 334 FINQMPIKPNTVIWRTLLGACSLH 357
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 121/265 (45%), Gaps = 12/265 (4%)
Query: 2 YGKCGSMKDARQVFDAM-HLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
Y G + ARQVFD +N+V WT+MIS Y++N EA+ ++ +M D +
Sbjct: 110 YSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKIELDGVI 169
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSG--FGGHLVAQNGLISMYTNFGQVAHASDVFTM 118
+ AC G + +G ++++ IK L +N L++MY G+ A +F
Sbjct: 170 VTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKARKLFDE 229
Query: 119 ISIKDLISWSSMIRGFTQLGYEIEALYLFR-----DMLRQGVYQPNEFVLGSVFSACS-S 172
KD+ +++SMI G+ G E+L LF+ D + V PN+ V ACS S
Sbjct: 230 SMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVLMACSHS 289
Query: 173 LLEPEYGRQIHGICAKFGLV-RNVFSGCSLCDMYAKCGFLPSAKTAFYQIE-SPDLVSWN 230
L E R + + L R GC + D++ + G L A Q+ P+ V W
Sbjct: 290 GLVEEGKRHFKSMIMDYNLKPREAHFGC-MVDLFCRSGHLKDAHEFINQMPIKPNTVIWR 348
Query: 231 AIIAAFADSGDANEAISIFRQMMHI 255
++ A + G+ + R++ +
Sbjct: 349 TLLGACSLHGNVELGEEVQRRIFEL 373
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 92/384 (23%), Positives = 173/384 (45%), Gaps = 34/384 (8%)
Query: 131 IRGFTQLGYEIEALYLFRDMLRQGVYQPNEF-VLGSVFSACSSLLEPEYGRQIHGICAKF 189
++ + + G I+AL FR RQ + F VL ++ + + GRQIH + K
Sbjct: 35 LKQYLESGEPIKALLDFRHRFRQSPSFVDSFSVLFAIKVSSAQKASSLDGRQIHALVRKL 94
Query: 190 GLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQI-ESPDLVSWNAIIAAFADSGDANEAISI 248
G + SL Y+ G + A+ F + E ++V W A+I+A+ ++ ++ EAI +
Sbjct: 95 GFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIEL 154
Query: 249 FRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVG--FNKEVALYNSLLTMY 306
F++M + D + L AC A+ G +I+S +K ++ L NSLL MY
Sbjct: 155 FKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMY 214
Query: 307 TKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENK------ 360
K A +F+ S ++ ++ +++ + QA E+ LFK+M +
Sbjct: 215 VKSGETEKARKLFDE-SMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVIT 273
Query: 361 PNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNG------LIDMYAKCGSV 414
PN +T +L C+ +E G + H S +++D ++ ++D++ + G +
Sbjct: 274 PNDVTFIGVLMACSHSGLVEEGKR-HFKS----MIMDYNLKPREAHFGCMVDLFCRSGHL 328
Query: 415 IHAQRVFDSTE-NPNVISWSSLIVGYAMSG---LGHEALNLFRKMRNLGVRPNEVTYVGV 470
A + PN + W +L+ ++ G LG E R++ L + +VG
Sbjct: 329 KDAHEFINQMPIKPNTVIWRTLLGACSLHGNVELGEEVQ---RRIFEL-----DRDHVGD 380
Query: 471 LSACSHIGLVEEGWNLYNTMEEEL 494
A S+I + W+ + M + +
Sbjct: 381 YVALSNIYASKGMWDEKSKMRDRV 404
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 91/199 (45%), Gaps = 15/199 (7%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLR------SGF 54
MY K G + AR++FD ++V ++TSMI GY+ NGQ E++ ++ +M +
Sbjct: 213 MYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVI 272
Query: 55 FPDQLTFGSIIKACCIAGDIYLG-RQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHAS 113
P+ +TF ++ AC +G + G R + ++ ++ ++ G + A
Sbjct: 273 TPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDAH 332
Query: 114 DVFTMISIK-DLISWSSM-----IRGFTQLGYEIEA--LYLFRDMLRQGVYQPNEFVLGS 165
+ + IK + + W ++ + G +LG E++ L RD + V N +
Sbjct: 333 EFINQMPIKPNTVIWRTLLGACSLHGNVELGEEVQRRIFELDRDHVGDYVALSNIYASKG 392
Query: 166 VFSACSSLLEPEYGRQIHG 184
++ S + + R++ G
Sbjct: 393 MWDEKSKMRDRVRKRRMPG 411
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 239 bits (611), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 161/540 (29%), Positives = 260/540 (48%), Gaps = 53/540 (9%)
Query: 56 PDQLTFGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDV 115
PD+ F S+I AC D R +HA +++ G VA L+S + ++ +
Sbjct: 27 PDESHFISLIHAC---KDTASLRHVHAQILRRGVLSSRVAAQ-LVSCSSLLKSPDYSLSI 82
Query: 116 FTMISIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLE 175
F ++ +++IRG T+ ++ F MLR GV +P+ V + S L
Sbjct: 83 FRNSEERNPFVLNALIRGLTENARFESSVRHFILMLRLGV-KPDRLTFPFVLKSNSKLGF 141
Query: 176 PEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVS------W 229
GR +H K + + F SL DMYAK G L A F ESPD + W
Sbjct: 142 RWLGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFE--ESPDRIKKESILIW 199
Query: 230 NAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVK 289
N +I + + D + A ++FR M P+ N G
Sbjct: 200 NVLINGYCRAKDMHMATTLFRSM------PER----------------NSGS-------- 229
Query: 290 VGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFR 349
+++L+ Y L+ A +FE + + N+VSW +++ Q
Sbjct: 230 ---------WSTLIKGYVDSGELNRAKQLFELMPEK-NVVSWTTLINGFSQTGDYETAIS 279
Query: 350 LFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYA 409
+ +ML KPN TI +L C++ +L G ++H + + +G+ LD ++ L+DMYA
Sbjct: 280 TYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYA 339
Query: 410 KCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVG 469
KCG + A VF + + +++SW+++I G+A+ G H+A+ FR+M G +P+EV ++
Sbjct: 340 KCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLA 399
Query: 470 VLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFD 529
VL+AC + V+ G N +++M + I P +H+ +VDLL RAG L EA + +
Sbjct: 400 VLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPIN 459
Query: 530 PDITTWKTLLSSCKTHGNVDIAERAAENILKLDPSNSAALVLLSSIHASAGNWEDVAKLR 589
PD+TTW L +CK H AE ++N+L+LDP + + L HAS GN +DV K R
Sbjct: 460 PDLTTWAALYRACKAHKGYRRAESVSQNLLELDPELCGSYIFLDKTHASKGNIQDVEKRR 519
Score = 153 bits (387), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 99/347 (28%), Positives = 167/347 (48%), Gaps = 45/347 (12%)
Query: 1 MYGKCGSMKDARQVF----DAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFP 56
MY K G +K A QVF D + +++ W +I+GY
Sbjct: 170 MYAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGY----------------------- 206
Query: 57 DQLTFGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVF 116
C A D+++ L + + G + + LI Y + G++ A +F
Sbjct: 207 ------------CRAKDMHMATTLFRSMPERNSG----SWSTLIKGYVDSGELNRAKQLF 250
Query: 117 TMISIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEP 176
++ K+++SW+++I GF+Q G A+ + +ML +G+ +PNE+ + +V SACS
Sbjct: 251 ELMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGL-KPNEYTIAAVLSACSKSGAL 309
Query: 177 EYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAF 236
G +IHG G+ + G +L DMYAKCG L A T F + D++SW A+I +
Sbjct: 310 GSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHKDILSWTAMIQGW 369
Query: 237 ADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQ-IHSYIVKVGFNKE 295
A G ++AI FRQMM+ G PD + FL++L AC + ++ G+ S +
Sbjct: 370 AVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPT 429
Query: 296 VALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHK 342
+ Y ++ + + L++A + E + N +L +W A+ AC HK
Sbjct: 430 LKHYVLVVDLLGRAGKLNEAHELVENMPINPDLTTWAALYRACKAHK 476
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 132/256 (51%), Gaps = 3/256 (1%)
Query: 2 YGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTF 61
Y G + A+Q+F+ M +NVVSWT++I+G+SQ G A+ Y +ML G P++ T
Sbjct: 237 YVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTI 296
Query: 62 GSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISI 121
+++ AC +G + G ++H +++ +G L+ MY G++ A+ VF+ ++
Sbjct: 297 AAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNH 356
Query: 122 KDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQ 181
KD++SW++MI+G+ G +A+ FR M+ G +P+E V +V +AC + E + G
Sbjct: 357 KDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSG-EKPDEVVFLAVLTACLNSSEVDLGLN 415
Query: 182 -IHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIE-SPDLVSWNAIIAAFADS 239
+ + + + + D+ + G L A + +PDL +W A+ A
Sbjct: 416 FFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPINPDLTTWAALYRACKAH 475
Query: 240 GDANEAISIFRQMMHI 255
A S+ + ++ +
Sbjct: 476 KGYRRAESVSQNLLEL 491
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 239 bits (610), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 131/378 (34%), Positives = 209/378 (55%), Gaps = 4/378 (1%)
Query: 214 AKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTS 273
A + F I+ P +N +I + + EA+ + +MM G PD+ T+ LL ACT
Sbjct: 85 AASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTR 144
Query: 274 PMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAI-SKNANLVSWN 332
++ +G QIH + K+G +V + NSL+ MY +C + + +VFE + SK A SW+
Sbjct: 145 LKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTA--ASWS 202
Query: 333 AILSACLQHKQAGETFRLFKQMLFSEN-KPNMITITNLLGTCAELASLEVGNQVHCFSVK 391
+++SA E LF+ M N K + + L CA +L +G +H F ++
Sbjct: 203 SMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLR 262
Query: 392 SGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNL 451
+ L++ V L+DMY KCG + A +F E N +++S++I G A+ G G AL +
Sbjct: 263 NISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRM 322
Query: 452 FRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLA 511
F KM G+ P+ V YV VL+ACSH GLV+EG ++ M +E + P EH+ C+VDLL
Sbjct: 323 FSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLG 382
Query: 512 RAGCLYEAETFIRKTGFDPDITTWKTLLSSCKTHGNVDIAERAAENILKLDPSNSAALVL 571
RAG L EA I+ + + W+T LS C+ N+++ + AA+ +LKL N +L
Sbjct: 383 RAGLLEEALETIQSIPIEKNDVIWRTFLSQCRVRQNIELGQIAAQELLKLSSHNPGDYLL 442
Query: 572 LSSIHASAGNWEDVAKLR 589
+S++++ W+DVA+ R
Sbjct: 443 ISNLYSQGQMWDDVARTR 460
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 110/367 (29%), Positives = 178/367 (48%), Gaps = 5/367 (1%)
Query: 7 SMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTFGSIIK 66
SM A +F + + +MI GY EA+ Y +M++ G PD T+ ++K
Sbjct: 81 SMNYAASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLK 140
Query: 67 ACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIKDLIS 126
AC I G+Q+H V K G + QN LI+MY G++ +S VF + K S
Sbjct: 141 ACTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAAS 200
Query: 127 WSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGIC 186
WSSM+ +G E L LFR M + + E + S AC++ G IHG
Sbjct: 201 WSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFL 260
Query: 187 AKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAI 246
+ N+ SL DMY KCG L A F ++E + ++++A+I+ A G+ A+
Sbjct: 261 LRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESAL 320
Query: 247 SIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVAL-YNSLLTM 305
+F +M+ GL PD + ++S+L AC+ + +G ++ + ++K G + A Y L+ +
Sbjct: 321 RMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDL 380
Query: 306 YTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLF---SENKPN 362
+ L +AL ++I N V W LS C + +Q E ++ Q L S N +
Sbjct: 381 LGRAGLLEEALETIQSIPIEKNDVIWRTFLSQC-RVRQNIELGQIAAQELLKLSSHNPGD 439
Query: 363 MITITNL 369
+ I+NL
Sbjct: 440 YLLISNL 446
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 117/239 (48%), Gaps = 8/239 (3%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQML-RSGFFPDQL 59
MYG+CG M+ + VF+ + + SW+SM+S + G +E ++++ M + ++
Sbjct: 176 MYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEES 235
Query: 60 TFGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMI 119
S + AC G + LG +H ++++ +++ Q L+ MY G + A +F +
Sbjct: 236 GMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKM 295
Query: 120 SIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYG 179
++ +++S+MI G G AL +F M+++G+ +P+ V SV +ACS + G
Sbjct: 296 EKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGL-EPDHVVYVSVLNACSHSGLVKEG 354
Query: 180 RQIHGICAKFGLVRNVFS--GCSLCDMYAKCGFLPSAKTAFYQ--IESPDLVSWNAIIA 234
R++ K G V GC L D+ + G L A IE D++ W ++
Sbjct: 355 RRVFAEMLKEGKVEPTAEHYGC-LVDLLGRAGLLEEALETIQSIPIEKNDVI-WRTFLS 411
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 90/170 (52%), Gaps = 12/170 (7%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
MY KCG + A +F M RN +++++MISG + +G+G A+ M+ +M++ G PD +
Sbjct: 278 MYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHVV 337
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNG-LISMYTNFGQVAHASDVFTMI 119
+ S++ AC +G + GR++ A ++K G G L+ + G + A + I
Sbjct: 338 YVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSI 397
Query: 120 SI-KDLISWSSM-----IRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVL 163
I K+ + W + +R +LG +I A +++L+ + P +++L
Sbjct: 398 PIEKNDVIWRTFLSQCRVRQNIELG-QIAA----QELLKLSSHNPGDYLL 442
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 236 bits (602), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 153/558 (27%), Positives = 265/558 (47%), Gaps = 87/558 (15%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
MY KCG + DAR+VFD+M RN+ +W++MI YS+ + E ++ M++ G PD
Sbjct: 124 MYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFL 183
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMIS 120
F I++ C GD+ G+ +H+ VIK G L N ++++Y G++ A+ F +
Sbjct: 184 FPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMR 243
Query: 121 IKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGR 180
+D+I+W+S++ + Q G EA+ L ++M ++G+ P + + L + +
Sbjct: 244 ERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGI-SPGLVTWNILIGGYNQLGKCDAAM 302
Query: 181 QIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSG 240
+ FG+ +VF +W A+I+ +G
Sbjct: 303 DLMQKMETFGITADVF-------------------------------TWTAMISGLIHNG 331
Query: 241 DANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYN 300
+A+ +FR+M G++P+++T +S + AC+ +NQG ++HS VK+GF +V + N
Sbjct: 332 MRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGN 391
Query: 301 SLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENK 360
SL+ MY+KC L DA VF+++ KN ++ +WN++++ Q G+ + LF +M + +
Sbjct: 392 SLVDMYSKCGKLEDARKVFDSV-KNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLR 450
Query: 361 PNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRV 420
PN+IT N +I Y K G A +
Sbjct: 451 PNIITW-----------------------------------NTMISGYIKNGDEGEAMDL 475
Query: 421 FDSTENP-----NVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACS 475
F E N +W+ +I GY +G EAL LFRKM+ PN VT + +L AC+
Sbjct: 476 FQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACA 535
Query: 476 HI---GLVEE--GWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFD- 529
++ +V E G L ++ + A + D A++G + + T G +
Sbjct: 536 NLLGAKMVREIHGCVLRRNLDAIHAVKNA------LTDTYAKSGDIEYSRTIF--LGMET 587
Query: 530 PDITTWKTLLSSCKTHGN 547
DI TW +L+ HG+
Sbjct: 588 KDIITWNSLIGGYVLHGS 605
Score = 226 bits (576), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 142/515 (27%), Positives = 253/515 (49%), Gaps = 45/515 (8%)
Query: 35 QNGQGNEAVVMYIQMLRSGFFPDQLTFGSIIKACCIAGDIYLGRQLHAHVIKSGFG---- 90
+NG EA + + G + T+ ++++C +G I+LGR LHA FG
Sbjct: 58 RNGSLLEAEKALDSLFQQGSKVKRSTYLKLLESCIDSGSIHLGRILHAR-----FGLFTE 112
Query: 91 GHLVAQNGLISMYTNFGQVAHASDVFTMISIKDLISWSSMIRGFTQLGYEIEALYLFRDM 150
+ + L+SMY G +A A VF + ++L +WS+MI +++ E LFR M
Sbjct: 113 PDVFVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLM 172
Query: 151 LRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGF 210
++ GV P++F+ + C++ + E G+ IH + K G+ + S+ +YAKCG
Sbjct: 173 MKDGVL-PDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGE 231
Query: 211 LPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCA 270
L A F ++ D+++WN+++ A+ +G EA+ + ++M G+ P +T
Sbjct: 232 LDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVT------- 284
Query: 271 CTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVS 330
+N + YN L KC D + E A++ +
Sbjct: 285 ---------------------WNILIGGYNQL----GKCDAAMDLMQKMETFGITADVFT 319
Query: 331 WNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSV 390
W A++S + + + +F++M + PN +TI + + C+ L + G++VH +V
Sbjct: 320 WTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAV 379
Query: 391 KSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALN 450
K G + DV V N L+DMY+KCG + A++VFDS +N +V +W+S+I GY +G +A
Sbjct: 380 KMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYE 439
Query: 451 LFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLL 510
LF +M++ +RPN +T+ ++S G E +L+ ME++ + ++ ++
Sbjct: 440 LFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGY 499
Query: 511 ARAGCLYEAETFIRKTGFD---PDITTWKTLLSSC 542
+ G EA RK F P+ T +LL +C
Sbjct: 500 IQNGKKDEALELFRKMQFSRFMPNSVTILSLLPAC 534
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 236 bits (601), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 157/589 (26%), Positives = 284/589 (48%), Gaps = 90/589 (15%)
Query: 4 KCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTFGS 63
K G + +AR++FD + R+VV+WT +I+GY +
Sbjct: 58 KVGKIAEARKLFDGLPERDVVTWTHVITGYIK---------------------------- 89
Query: 64 IIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIKD 123
GD+ R+L V ++V ++S Y Q++ A +F + ++
Sbjct: 90 -------LGDMREARELFDRVDSRK---NVVTWTAMVSGYLRSKQLSIAEMLFQEMPERN 139
Query: 124 LISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIH 183
++SW++MI G+ Q G +AL LF +M PE
Sbjct: 140 VVSWNTMIDGYAQSGRIDKALELFDEM-------------------------PE------ 168
Query: 184 GICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDAN 243
RN+ S S+ + G + A F ++ D+VSW A++ A +G +
Sbjct: 169 ---------RNIVSWNSMVKALVQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVD 219
Query: 244 EAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLL 303
EA +F M +I A + A N + + +V ++ A +N+++
Sbjct: 220 EARRLFDCMPERNIIS--------WNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMI 271
Query: 304 TMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSEN-KPN 362
T + + ++ A +F+ + + N++SW +++ +++K+ E +F +ML + KPN
Sbjct: 272 TGFIRNREMNKACGLFDRMPEK-NVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPN 330
Query: 363 MITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFD 422
+ T ++L C++LA L G Q+H KS + V++ L++MY+K G +I A+++FD
Sbjct: 331 VGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFD 390
Query: 423 S--TENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLV 480
+ ++ISW+S+I YA G G EA+ ++ +MR G +P+ VTY+ +L ACSH GLV
Sbjct: 391 NGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLV 450
Query: 481 EEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTLLS 540
E+G + + + +P EH++C+VDL RAG L + FI + + +LS
Sbjct: 451 EKGMEFFKDLVRDESLPLREEHYTCLVDLCGRAGRLKDVTNFINCDDARLSRSFYGAILS 510
Query: 541 SCKTHGNVDIAERAAENILKLDPSNSAALVLLSSIHASAGNWEDVAKLR 589
+C H V IA+ + +L+ ++ VL+S+I+A+ G E+ A++R
Sbjct: 511 ACNVHNEVSIAKEVVKKVLETGSDDAGTYVLMSNIYAANGKREEAAEMR 559
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 100/391 (25%), Positives = 191/391 (48%), Gaps = 34/391 (8%)
Query: 2 YGKCGSMKDARQVFDAMHLR-NVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQ-- 58
Y K G M++AR++FD + R NVV+WT+M+SGY ++ Q + A +++ +M P++
Sbjct: 87 YIKLGDMREARELFDRVDSRKNVVTWTAMVSGYLRSKQLSIAEMLFQEM------PERNV 140
Query: 59 LTFGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTM 118
+++ ++I +G I +L + + ++V+ N ++ G++ A ++F
Sbjct: 141 VSWNTMIDGYAQSGRIDKALELFDEMPER----NIVSWNSMVKALVQRGRIDEAMNLFER 196
Query: 119 ISIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLG----SVFSACSSLL 174
+ +D++SW++M+ G + G EA LF M + + N + G + L
Sbjct: 197 MPRRDVVSWTAMVDGLAKNGKVDEARRLFDCMPERNIISWNAMITGYAQNNRIDEADQLF 256
Query: 175 EPEYGRQIHGICAKF-GLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAII 233
+ R G +RN +M CG F ++ +++SW +I
Sbjct: 257 QVMPERDFASWNTMITGFIRNR-------EMNKACGL-------FDRMPEKNVISWTTMI 302
Query: 234 AAFADSGDANEAISIFRQMMHIGLI-PDSITFLSLLCACTSPMALNQGMQIHSYIVKVGF 292
+ ++ + EA+++F +M+ G + P+ T++S+L AC+ L +G QIH I K
Sbjct: 303 TGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVH 362
Query: 293 NKEVALYNSLLTMYTKCSNLHDALSVFE-AISKNANLVSWNAILSACLQHKQAGETFRLF 351
K + ++LL MY+K L A +F+ + +L+SWN++++ H E ++
Sbjct: 363 QKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMY 422
Query: 352 KQMLFSENKPNMITITNLLGTCAELASLEVG 382
QM KP+ +T NLL C+ +E G
Sbjct: 423 NQMRKHGFKPSAVTYLNLLFACSHAGLVEKG 453
Score = 139 bits (350), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 108/418 (25%), Positives = 186/418 (44%), Gaps = 71/418 (16%)
Query: 2 YGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTF 61
Y + + A +F M RNVVSW +MI GY+Q+G+ ++A+ ++ +M +++
Sbjct: 119 YLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPERNI----VSW 174
Query: 62 GSIIKACCIAGDIYLGRQLHAHVIKSGF---------------------------GGHLV 94
S++KA G I L + + +++
Sbjct: 175 NSMVKALVQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARRLFDCMPERNII 234
Query: 95 AQNGLISMYTNFGQVAHASDVF------------TMIS-------------------IKD 123
+ N +I+ Y ++ A +F TMI+ K+
Sbjct: 235 SWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNKACGLFDRMPEKN 294
Query: 124 LISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIH 183
+ISW++MI G+ + EAL +F MLR G +PN S+ SACS L G+QIH
Sbjct: 295 VISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIH 354
Query: 184 GICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQ--IESPDLVSWNAIIAAFADSGD 241
+ +K +N +L +MY+K G L +A+ F + DL+SWN++IA +A G
Sbjct: 355 QLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGH 414
Query: 242 ANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVAL--- 298
EAI ++ QM G P ++T+L+LL AC+ + +GM+ +V+ ++ + L
Sbjct: 415 GKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVR---DESLPLREE 471
Query: 299 -YNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQML 355
Y L+ + + L D + + + AILSAC H + + K++L
Sbjct: 472 HYTCLVDLCGRAGRLKDVTNFINCDDARLSRSFYGAILSACNVHNEVSIAKEVVKKVL 529
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 54/88 (61%), Gaps = 2/88 (2%)
Query: 1 MYGKCGSMKDARQVFDA--MHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQ 58
MY K G + AR++FD + R+++SW SMI+ Y+ +G G EA+ MY QM + GF P
Sbjct: 375 MYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSA 434
Query: 59 LTFGSIIKACCIAGDIYLGRQLHAHVIK 86
+T+ +++ AC AG + G + +++
Sbjct: 435 VTYLNLLFACSHAGLVEKGMEFFKDLVR 462
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 235 bits (600), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 130/414 (31%), Positives = 226/414 (54%), Gaps = 6/414 (1%)
Query: 182 IHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGD 241
+H + K G + F+ L Y K + +A+ F ++ P++VSW ++I+ + D G
Sbjct: 51 LHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGK 110
Query: 242 ANEAISIFRQMMHIGLIP-DSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYN 300
A+S+F++M +P + TF S+ AC++ G IH+ + G + + + +
Sbjct: 111 PQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSS 170
Query: 301 SLLTMYTKCSNLHDALSVFEA-ISKNANLVSWNAILSACLQHKQAGETFRLFKQM--LFS 357
SL+ MY KC+++ A VF++ I N+VSW ++++A Q+ + E LF+ +
Sbjct: 171 SLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALT 230
Query: 358 ENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHA 417
++ N + +++ C+ L L+ G H + G + V+ L+DMYAKCGS+ A
Sbjct: 231 SDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCA 290
Query: 418 QRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHI 477
+++F +VIS++S+I+ A GLG A+ LF +M + PN VT +GVL ACSH
Sbjct: 291 EKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSHS 350
Query: 478 GLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIR--KTGFDPDITTW 535
GLV EG + M E+ G+ P H++C+VD+L R G + EA + + G + W
Sbjct: 351 GLVNEGLEYLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGALLW 410
Query: 536 KTLLSSCKTHGNVDIAERAAENILKLDPSNSAALVLLSSIHASAGNWEDVAKLR 589
LLS+ + HG V+I A++ +++ + ++A + LS+ +A +G WED LR
Sbjct: 411 GALLSAGRLHGRVEIVSEASKRLIQSNQQVTSAYIALSNAYAVSGGWEDSESLR 464
Score = 175 bits (443), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 114/347 (32%), Positives = 182/347 (52%), Gaps = 7/347 (2%)
Query: 2 YGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSG-FFPDQLT 60
Y K + AR++FD M NVVSWTS+ISGY+ G+ A+ M+ +M P++ T
Sbjct: 74 YVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGKPQNALSMFQKMHEDRPVPPNEYT 133
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVF-TMI 119
F S+ KAC + +G+ +HA + SG ++V + L+ MY V A VF +MI
Sbjct: 134 FASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCNDVETARRVFDSMI 193
Query: 120 SI-KDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVY-QPNEFVLGSVFSACSSLLEPE 177
++++SW+SMI + Q EA+ LFR + N+F+L SV SACSSL +
Sbjct: 194 GYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALTSDRANQFMLASVISACSSLGRLQ 253
Query: 178 YGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFA 237
+G+ HG+ + G N SL DMYAKCG L A+ F +I ++S+ ++I A A
Sbjct: 254 WGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCHSVISYTSMIMAKA 313
Query: 238 DSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIV-KVGFNKEV 296
G A+ +F +M+ + P+ +T L +L AC+ +N+G++ S + K G +
Sbjct: 314 KHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSHSGLVNEGLEYLSLMAEKYGVVPDS 373
Query: 297 ALYNSLLTMYTKCSNLHDALSVFEAISKNAN--LVSWNAILSACLQH 341
Y ++ M + + +A + + I A + W A+LSA H
Sbjct: 374 RHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGALLWGALLSAGRLH 420
Score = 162 bits (410), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 112/424 (26%), Positives = 194/424 (45%), Gaps = 12/424 (2%)
Query: 29 MISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTFGSIIKACCIAGDIYLGRQLHAHVIKSG 88
M G+ QN A +++ ++ FF + T ++ + + LH +K G
Sbjct: 1 MKKGFIQNVHLAPATSLFVPQYKNDFFHLK-TKAFLVHKLSESTNAAFTNLLHTLTLKLG 59
Query: 89 FGGHLVAQNGLISMYTNFGQVAHASDVFTMISIKDLISWSSMIRGFTQLGYEIEALYLFR 148
F N L+ Y ++ A +F + +++SW+S+I G+ +G AL +F+
Sbjct: 60 FASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGKPQNALSMFQ 119
Query: 149 DMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKC 208
M PNE+ SVF ACS+L E G+ IH GL RN+ SL DMY KC
Sbjct: 120 KMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKC 179
Query: 209 GFLPSAKTAFYQI--ESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPD---SIT 263
+ +A+ F + ++VSW ++I A+A + +EAI +FR + L D
Sbjct: 180 NDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRS-FNAALTSDRANQFM 238
Query: 264 FLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAIS 323
S++ AC+S L G H + + G+ + SLL MY KC +L A +F I
Sbjct: 239 LASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRI- 297
Query: 324 KNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGN 383
+ +++S+ +++ A +H +LF +M+ PN +T+ +L C+ + G
Sbjct: 298 RCHSVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSHSGLVNEGL 357
Query: 384 Q-VHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTE---NPNVISWSSLIVGY 439
+ + + K G+V D ++DM + G V A + + E + W +L+
Sbjct: 358 EYLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGALLWGALLSAG 417
Query: 440 AMSG 443
+ G
Sbjct: 418 RLHG 421
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 79/244 (32%), Positives = 122/244 (50%), Gaps = 11/244 (4%)
Query: 1 MYGKCGSMKDARQVFDAM--HLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPD- 57
MYGKC ++ AR+VFD+M + RNVVSWTSMI+ Y+QN +G+EA+ ++ + + D
Sbjct: 175 MYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELF-RSFNAALTSDR 233
Query: 58 --QLTFGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDV 115
Q S+I AC G + G+ H V + G+ + V L+ MY G ++ A +
Sbjct: 234 ANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKI 293
Query: 116 FTMISIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACS-SLL 174
F I +IS++SMI + G A+ LF +M+ G PN L V ACS S L
Sbjct: 294 FLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMV-AGRINPNYVTLLGVLHACSHSGL 352
Query: 175 EPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIE---SPDLVSWNA 231
E + + K+G+V + + DM + G + A IE + W A
Sbjct: 353 VNEGLEYLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGALLWGA 412
Query: 232 IIAA 235
+++A
Sbjct: 413 LLSA 416
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 102/215 (47%), Gaps = 16/215 (7%)
Query: 383 NQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMS 442
N +H ++K G D N L+ Y K + A+++FD PNV+SW+S+I GY
Sbjct: 49 NLLHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDM 108
Query: 443 GLGHEALNLFRKM-RNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPARE 501
G AL++F+KM + V PNE T+ V ACS + G N++ +E I R
Sbjct: 109 GKPQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLE----ISGLRR 164
Query: 502 HF---SCMVDLLARAGCLYEA-ETFIRKTGFDPDITTWKTLLSS----CKTHGNVDIAER 553
+ S +VD+ + + A F G+ ++ +W +++++ + H +++ R
Sbjct: 165 NIVVSSSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELF-R 223
Query: 554 AAENILKLDPSNSAALVLLSSIHASAG--NWEDVA 586
+ L D +N L + S +S G W VA
Sbjct: 224 SFNAALTSDRANQFMLASVISACSSLGRLQWGKVA 258
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 234 bits (597), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 141/404 (34%), Positives = 213/404 (52%), Gaps = 42/404 (10%)
Query: 193 RNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQM 252
+NV S+ + Y L SA+ F D+V WN +I+ + + G+ EA S+F QM
Sbjct: 57 KNVVLWTSMINGYLLNKDLVSARRYFDLSPERDIVLWNTMISGYIEMGNMLEARSLFDQM 116
Query: 253 MHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNL 312
C ++V +N++L Y ++
Sbjct: 117 -----------------PC----------------------RDVMSWNTVLEGYANIGDM 137
Query: 313 HDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENK-PNMITITNLLG 371
VF+ + + N+ SWN ++ Q+ + E FK+M+ + PN T+T +L
Sbjct: 138 EACERVFDDMPER-NVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLS 196
Query: 372 TCAELASLEVGNQVHCFSVKSGL-VLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVI 430
CA+L + + G VH + G +DV+V N LIDMY KCG++ A VF + ++I
Sbjct: 197 ACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLI 256
Query: 431 SWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTM 490
SW+++I G A G G EALNLF +M+N G+ P++VT+VGVL AC H+GLVE+G +N+M
Sbjct: 257 SWNTMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSM 316
Query: 491 EEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTLLSSCKTHGNVDI 550
+ I P EH C+VDLL+RAG L +A FI K D W TLL + K + VDI
Sbjct: 317 FTDFSIMPEIEHCGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVDI 376
Query: 551 AERAAENILKLDPSNSAALVLLSSIHASAGNWEDVAKLRKVLDD 594
E A E ++KL+P N A V+LS+I+ AG ++D A+L+ + D
Sbjct: 377 GEVALEELIKLEPRNPANFVMLSNIYGDAGRFDDAARLKVAMRD 420
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 113/436 (25%), Positives = 196/436 (44%), Gaps = 21/436 (4%)
Query: 6 GSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTFGSII 65
G + A +VF M +NVV WTSMI+GY N A +F ++
Sbjct: 42 GVIASANKVFCEMVEKNVVLWTSMINGYLLNKDLVSA---------RRYFDLSPERDIVL 92
Query: 66 KACCIAGDIYLGRQLHAHVIKSGFG-GHLVAQNGLISMYTNFGQVAHASDVFTMISIKDL 124
I+G I +G L A + +++ N ++ Y N G + VF + +++
Sbjct: 93 WNTMISGYIEMGNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVFDDMPERNV 152
Query: 125 ISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHG 184
SW+ +I+G+ Q G E L F+ M+ +G PN+ + V SAC+ L ++G+ +H
Sbjct: 153 FSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHK 212
Query: 185 ICAKFGLVR-NVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDAN 243
G + +V +L DMY KCG + A F I+ DL+SWN +I A G
Sbjct: 213 YGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGT 272
Query: 244 EAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQ-IHSYIVKVGFNKEVALYNSL 302
EA+++F +M + G+ PD +TF+ +LCAC + G+ +S E+ +
Sbjct: 273 EALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGCV 332
Query: 303 LTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQA--GETFRLFKQMLFSENK 360
+ + ++ L A+ + A+ V W +L A +K+ GE L N
Sbjct: 333 VDLLSRAGFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVDIGEVALEELIKLEPRNP 392
Query: 361 PNMITITNLLGTCAEL---ASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYA---KCGSV 414
N + ++N+ G A L+V + F ++G+ + +GL+ Y+ K
Sbjct: 393 ANFVMLSNIYGDAGRFDDAARLKVAMRDTGFKKEAGVSW-IETDDGLVKFYSSGEKHPRT 451
Query: 415 IHAQRVFDSTENPNVI 430
QR+ ++ N++
Sbjct: 452 EELQRILRELKSFNIL 467
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 137/286 (47%), Gaps = 12/286 (4%)
Query: 99 LISMYTNFGQVAHASDVFTMISIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQP 158
L M G +A A+ VF + K+++ W+SMI G+ + A F + +
Sbjct: 34 LFGMLCLMGVIASANKVFCEMVEKNVVLWTSMINGYLLNKDLVSARRYFDLSPERDIVLW 93
Query: 159 NEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAF 218
N + G + ++LE R + R+V S ++ + YA G + + + F
Sbjct: 94 NTMISGYI--EMGNMLE---ARSLFDQMP----CRDVMSWNTVLEGYANIGDMEACERVF 144
Query: 219 YQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIG-LIPDSITFLSLLCACTSPMAL 277
+ ++ SWN +I +A +G +E + F++M+ G ++P+ T +L AC A
Sbjct: 145 DDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAF 204
Query: 278 NQGMQIHSYIVKVGFNK-EVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILS 336
+ G +H Y +G+NK +V + N+L+ MY KC + A+ VF+ I K +L+SWN +++
Sbjct: 205 DFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGI-KRRDLISWNTMIN 263
Query: 337 ACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVG 382
H E LF +M S P+ +T +L C + +E G
Sbjct: 264 GLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDG 309
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 114/238 (47%), Gaps = 5/238 (2%)
Query: 2 YGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSG-FFPDQLT 60
Y G M+ +VFD M RNV SW +I GY+QNG+ +E + + +M+ G P+ T
Sbjct: 131 YANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDAT 190
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLV-AQNGLISMYTNFGQVAHASDVFTMI 119
++ AC G G+ +H + G+ V +N LI MY G + A +VF I
Sbjct: 191 MTLVLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGI 250
Query: 120 SIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYG 179
+DLISW++MI G G+ EAL LF +M G+ P++ V AC + E G
Sbjct: 251 KRRDLISWNTMINGLAAHGHGTEALNLFHEMKNSGI-SPDKVTFVGVLCACKHMGLVEDG 309
Query: 180 -RQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIE-SPDLVSWNAIIAA 235
+ + F ++ + + D+ ++ GFL A ++ D V W ++ A
Sbjct: 310 LAYFNSMFTDFSIMPEIEHCGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLLGA 367
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 48/68 (70%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
MYGKCG+++ A +VF + R+++SW +MI+G + +G G EA+ ++ +M SG PD++T
Sbjct: 233 MYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEALNLFHEMKNSGISPDKVT 292
Query: 61 FGSIIKAC 68
F ++ AC
Sbjct: 293 FVGVLCAC 300
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 234 bits (597), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 138/406 (33%), Positives = 218/406 (53%), Gaps = 42/406 (10%)
Query: 229 WNAIIAAFA---DSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHS 285
WN II A S + IS++ +M + + PD TF LL + +P+ L G + H+
Sbjct: 27 WNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRTHA 86
Query: 286 YIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSA-------- 337
I+ G +K+ + SLL MY+ C +L A VF+ S + +L +WN++++A
Sbjct: 87 QILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDD-SGSKDLPAWNSVVNAYAKAGLID 145
Query: 338 --------------------------CLQHKQAGETFRLFKQMLFSEN--KPNMITITNL 369
C ++K+A + FR + +E +PN T++ +
Sbjct: 146 DARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTV 205
Query: 370 LGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDST-ENPN 428
L C L +LE G VH + K + +D+ + LIDMYAKCGS+ A+RVF++ +
Sbjct: 206 LSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKD 265
Query: 429 VISWSSLIVGYAMSGLGHEALNLFRKMRNL-GVRPNEVTYVGVLSACSHIGLVEEGWNLY 487
V ++S++I AM GL E LF +M + PN VT+VG+L AC H GL+ EG + +
Sbjct: 266 VKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYF 325
Query: 488 NTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTLLSSCKTHGN 547
M EE GI P+ +H+ CMVDL R+G + EAE+FI +PD+ W +LLS + G+
Sbjct: 326 KMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGD 385
Query: 548 VDIAERAAENILKLDPSNSAALVLLSSIHASAGNWEDVAKLRKVLD 593
+ E A + +++LDP NS A VLLS+++A G W +V +R ++
Sbjct: 386 IKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEME 431
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 96/369 (26%), Positives = 164/369 (44%), Gaps = 42/369 (11%)
Query: 11 ARQVFDAMHLR-NVVSWTSMISGYSQN---GQGNEAVVMYIQMLRSGFFPDQLTFGSIIK 66
A +F HL+ W +I N Q + + +Y++M PD TF ++
Sbjct: 11 ANPIFHIRHLKLESFLWNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLP 70
Query: 67 ACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIKDL-- 124
+ + LG++ HA ++ G + L++MY++ G + A VF KDL
Sbjct: 71 SFHNPLHLPLGQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPA 130
Query: 125 -----------------------------ISWSSMIRGFTQLGYEIEALYLFRDML---- 151
ISWS +I G+ G EAL LFR+M
Sbjct: 131 WNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKP 190
Query: 152 RQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFL 211
+ +PNEF + +V SAC L E G+ +H K+ + ++ G +L DMYAKCG L
Sbjct: 191 NEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSL 250
Query: 212 PSAKTAFYQIES-PDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLI-PDSITFLSLLC 269
AK F + S D+ +++A+I A G +E +F +M I P+S+TF+ +L
Sbjct: 251 ERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILG 310
Query: 270 ACTSPMALNQGMQIHSYIV-KVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANL 328
AC +N+G ++ + G + Y ++ +Y + + +A S ++ ++
Sbjct: 311 ACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDV 370
Query: 329 VSWNAILSA 337
+ W ++LS
Sbjct: 371 LIWGSLLSG 379
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 122/262 (46%), Gaps = 8/262 (3%)
Query: 2 YGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQML-----RSGFFP 56
Y K G + DAR++FD M RNV+SW+ +I+GY G+ EA+ ++ +M + P
Sbjct: 138 YAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRP 197
Query: 57 DQLTFGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVF 116
++ T +++ AC G + G+ +HA++ K +V LI MY G + A VF
Sbjct: 198 NEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVF 257
Query: 117 TMI-SIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSL-L 174
+ S KD+ ++S+MI G E LF +M PN + AC L
Sbjct: 258 NALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGL 317
Query: 175 EPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIE-SPDLVSWNAII 233
E + +FG+ ++ + D+Y + G + A++ + PD++ W +++
Sbjct: 318 INEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLL 377
Query: 234 AAFADSGDANEAISIFRQMMHI 255
+ GD ++++ +
Sbjct: 378 SGSRMLGDIKTCEGALKRLIEL 399
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 73/142 (51%), Gaps = 4/142 (2%)
Query: 1 MYGKCGSMKDARQVFDAM-HLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRS-GFFPDQ 58
MY KCGS++ A++VF+A+ ++V ++++MI + G +E ++ +M S P+
Sbjct: 243 MYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNS 302
Query: 59 LTFGSIIKACCIAGDIYLGRQLHAHVIKS-GFGGHLVAQNGLISMYTNFGQVAHA-SDVF 116
+TF I+ AC G I G+ +I+ G + ++ +Y G + A S +
Sbjct: 303 VTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIA 362
Query: 117 TMISIKDLISWSSMIRGFTQLG 138
+M D++ W S++ G LG
Sbjct: 363 SMPMEPDVLIWGSLLSGSRMLG 384
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 234 bits (596), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 129/336 (38%), Positives = 187/336 (55%), Gaps = 3/336 (0%)
Query: 260 DSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVF 319
D+ S + +C G H +K GF +V L +SL+ +Y + +A VF
Sbjct: 119 DAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVF 178
Query: 320 EAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASL 379
E + + N+VSW A++S Q + +L+ +M S + PN T T LL C +L
Sbjct: 179 EEMPER-NVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGAL 237
Query: 380 EVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGY 439
G VHC ++ GL + +SN LI MY KCG + A R+FD N +V+SW+S+I GY
Sbjct: 238 GQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGY 297
Query: 440 AMSGLGHEALNLFR-KMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPP 498
A GL +A+ LF M G +P+ +TY+GVLS+C H GLV+EG +N M E G+ P
Sbjct: 298 AQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEH-GLKP 356
Query: 499 AREHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTLLSSCKTHGNVDIAERAAENI 558
H+SC+VDLL R G L EA I P+ W +LL SC+ HG+V RAAE
Sbjct: 357 ELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVHGDVWTGIRAAEER 416
Query: 559 LKLDPSNSAALVLLSSIHASAGNWEDVAKLRKVLDD 594
L L+P +A V L++++AS G W++ A +RK++ D
Sbjct: 417 LMLEPDCAATHVQLANLYASVGYWKEAATVRKLMKD 452
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 88/309 (28%), Positives = 150/309 (48%), Gaps = 2/309 (0%)
Query: 51 RSGFFPDQLTFGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVA 110
R G+ D S +++C + D G H +K GF + + L+ +Y + G+V
Sbjct: 113 RDGWSFDAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVE 172
Query: 111 HASDVFTMISIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSAC 170
+A VF + ++++SW++MI GF Q + ++ +R+ PN++ ++ SAC
Sbjct: 173 NAYKVFEEMPERNVVSWTAMISGFAQ-EWRVDICLKLYSKMRKSTSDPNDYTFTALLSAC 231
Query: 171 SSLLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWN 230
+ GR +H GL + SL MY KCG L A F Q + D+VSWN
Sbjct: 232 TGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWN 291
Query: 231 AIIAAFADSGDANEAISIFRQMM-HIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVK 289
++IA +A G A +AI +F MM G PD+IT+L +L +C + +G + + + +
Sbjct: 292 SMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAE 351
Query: 290 VGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFR 349
G E+ Y+ L+ + + L +AL + E + N V W ++L +C H R
Sbjct: 352 HGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVHGDVWTGIR 411
Query: 350 LFKQMLFSE 358
++ L E
Sbjct: 412 AAEERLMLE 420
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 103/379 (27%), Positives = 172/379 (45%), Gaps = 43/379 (11%)
Query: 159 NEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAF 218
+ + L S +C + G H + K G + +V+ G SL +Y G + +A F
Sbjct: 119 DAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVF 178
Query: 219 YQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALN 278
++ ++VSW A+I+ FA + + ++ +M P+ TF +LL ACT AL
Sbjct: 179 EEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALG 238
Query: 279 QGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSAC 338
QG +H + +G + + NSL++MY KC +L DA +F+ S N ++VSWN++++
Sbjct: 239 QGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFS-NKDVVSWNSMIAGY 297
Query: 339 LQHKQAGETFRLFKQML-FSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLD 397
QH A + LF+ M+ S KP+ IT +L +C ++ G + + GL +
Sbjct: 298 AQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKPE 357
Query: 398 VSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRN 457
++ + L+D+ + G L EAL L + N
Sbjct: 358 LNHYSCLVDLLGRFG-------------------------------LLQEALEL---IEN 383
Query: 458 LGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPP--AREHFSCMVDLLARAGC 515
+ ++PN V + +L +C G V W EE L + P A H + +L A G
Sbjct: 384 MPMKPNSVIWGSLLFSCRVHGDV---WTGIRAAEERLMLEPDCAATHVQ-LANLYASVGY 439
Query: 516 LYEAETFIRKTGFDPDITT 534
EA T +RK D + T
Sbjct: 440 WKEAAT-VRKLMKDKGLKT 457
Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 89/304 (29%), Positives = 147/304 (48%), Gaps = 18/304 (5%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
+Y G +++A +VF+ M RNVVSWT+MISG++Q + + + +Y +M +S P+ T
Sbjct: 164 LYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYT 223
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMIS 120
F +++ AC +G + GR +H + G +L N LISMY G + A +F S
Sbjct: 224 FTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFS 283
Query: 121 IKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGR 180
KD++SW+SMI G+ Q G ++A+ LF M+ + +P+ V S+C + GR
Sbjct: 284 NKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGR 343
Query: 181 QIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIE-SPDLVSWNAIIAAFADS 239
+ + A+ GL + L D+ + G L A + P+ V W +++ +
Sbjct: 344 KFFNLMAEHGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVH 403
Query: 240 GDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALY 299
GD I + + L PD CA T +Q+ + VG+ KE A
Sbjct: 404 GDVWTGIRAAEERLM--LEPD--------CAATH-------VQLANLYASVGYWKEAATV 446
Query: 300 NSLL 303
L+
Sbjct: 447 RKLM 450
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 234 bits (596), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 137/439 (31%), Positives = 232/439 (52%), Gaps = 37/439 (8%)
Query: 191 LVRNVFSGCSL--CDMYAKCGFLPS---AKTAFYQIESPDLVSWNAIIAAFADSGDANEA 245
L+R+ G +L + CG L + A F I++P+++ +NA+I ++ G E+
Sbjct: 27 LLRHFLHGSNLLLAHFISICGSLSNSDYANRVFSHIQNPNVLVFNAMIKCYSLVGPPLES 86
Query: 246 ISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTM 305
+S F M G+ D T+ LL +C+S L G +H +++ GF++ + ++ +
Sbjct: 87 LSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFHRLGKIRIGVVEL 146
Query: 306 YTKCSNLHDALSVFEAISKN------------------------------ANLVSWNAIL 335
YT + DA VF+ +S+ ++VSWN+++
Sbjct: 147 YTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMI 206
Query: 336 SACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLV 395
S+ + + E LF +M+ P+ T+ +L A L L+ G +H + SGL
Sbjct: 207 SSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLF 266
Query: 396 LD-VSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRK 454
D ++V N L+D Y K G + A +F + NV+SW++LI G A++G G ++LF
Sbjct: 267 KDFITVGNALVDFYCKSGDLEAATAIFRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDA 326
Query: 455 MRNLG-VRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARA 513
M G V PNE T++GVL+ CS+ G VE G L+ M E + EH+ MVDL++R+
Sbjct: 327 MIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMMERFKLEARTEHYGAMVDLMSRS 386
Query: 514 GCLYEAETFIRKTGFDPDITTWKTLLSSCKTHGNVDIAERAAENILKLDPSNSAALVLLS 573
G + EA F++ + + W +LLS+C++HG+V +AE AA ++K++P NS VLLS
Sbjct: 387 GRITEAFKFLKNMPVNANAAMWGSLLSACRSHGDVKLAEVAAMELVKIEPGNSGNYVLLS 446
Query: 574 SIHASAGNWEDVAKLRKVL 592
+++A G W+DV K+R ++
Sbjct: 447 NLYAEEGRWQDVEKVRTLM 465
Score = 152 bits (385), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 97/374 (25%), Positives = 182/374 (48%), Gaps = 38/374 (10%)
Query: 5 CGSMKD---ARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTF 61
CGS+ + A +VF + NV+ + +MI YS G E++ + M G + D+ T+
Sbjct: 46 CGSLSNSDYANRVFSHIQNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTY 105
Query: 62 GSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISI 121
++K+C D+ G+ +H +I++GF + G++ +YT+ G++ A VF +S
Sbjct: 106 APLLKSCSSLSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSE 165
Query: 122 KDLISWSSMIRGF-------------------------------TQLGYEIEALYLFRDM 150
++++ W+ MIRGF ++ G + EAL LF +M
Sbjct: 166 RNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEM 225
Query: 151 LRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFS-GCSLCDMYAKCG 209
+ QG + P+E + +V +SL + G+ IH GL ++ + G +L D Y K G
Sbjct: 226 IDQG-FDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSG 284
Query: 210 FLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLI-PDSITFLSLL 268
L +A F +++ ++VSWN +I+ A +G I +F M+ G + P+ TFL +L
Sbjct: 285 DLEAATAIFRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVL 344
Query: 269 CACTSPMALNQGMQIHSYIV-KVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNAN 327
C+ + +G ++ ++ + Y +++ + ++ + +A + + NAN
Sbjct: 345 ACCSYTGQVERGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNAN 404
Query: 328 LVSWNAILSACLQH 341
W ++LSAC H
Sbjct: 405 AAMWGSLLSACRSH 418
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/394 (23%), Positives = 176/394 (44%), Gaps = 39/394 (9%)
Query: 79 QLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIKDLISWSSMIRGFTQLG 138
++HAH+++ G + IS+ + +A+ VF+ I +++ +++MI+ ++ +G
Sbjct: 22 EIHAHLLRHFLHGSNLLLAHFISICGSLSNSDYANRVFSHIQNPNVLVFNAMIKCYSLVG 81
Query: 139 YEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFSG 198
+E+L F M +G++ +E+ + +CSSL + +G+ +HG + G R
Sbjct: 82 PPLESLSFFSSMKSRGIW-ADEYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFHRLGKIR 140
Query: 199 CSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQ------- 251
+ ++Y G + A+ F ++ ++V WN +I F DSGD + +F+Q
Sbjct: 141 IGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIV 200
Query: 252 ------------------------MMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYI 287
M+ G PD T +++L S L+ G IHS
Sbjct: 201 SWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTA 260
Query: 288 VKVGFNKE-VALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGE 346
G K+ + + N+L+ Y K +L A ++F + + N+VSWN ++S + +
Sbjct: 261 ESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQRR-NVVSWNTLISGSAVNGKGEF 319
Query: 347 TFRLFKQMLFSENK--PNMITITNLLGTCAELASLEVGNQVHCFSVKS-GLVLDVSVSNG 403
LF M+ E K PN T +L C+ +E G ++ ++ L
Sbjct: 320 GIDLFDAMI-EEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMMERFKLEARTEHYGA 378
Query: 404 LIDMYAKCGSVIHAQRVFDSTE-NPNVISWSSLI 436
++D+ ++ G + A + + N N W SL+
Sbjct: 379 MVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLL 412
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 116/243 (47%), Gaps = 3/243 (1%)
Query: 6 GSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTFGSII 65
G ++ +F M R++VSW SMIS S+ G+ EA+ ++ +M+ GF PD+ T +++
Sbjct: 182 GDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVL 241
Query: 66 KACCIAGDIYLGRQLHAHVIKSG-FGGHLVAQNGLISMYTNFGQVAHASDVFTMISIKDL 124
G + G+ +H+ SG F + N L+ Y G + A+ +F + +++
Sbjct: 242 PISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQRRNV 301
Query: 125 ISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHG 184
+SW+++I G G + LF M+ +G PNE V + CS + E G ++ G
Sbjct: 302 VSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFG 361
Query: 185 I-CAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIE-SPDLVSWNAIIAAFADSGDA 242
+ +F L ++ D+ ++ G + A + + + W ++++A GD
Sbjct: 362 LMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLLSACRSHGDV 421
Query: 243 NEA 245
A
Sbjct: 422 KLA 424
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 2 YGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSG-FFPDQLT 60
Y K G ++ A +F M RNVVSW ++ISG + NG+G + ++ M+ G P++ T
Sbjct: 280 YCKSGDLEAATAIFRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEAT 339
Query: 61 FGSIIKACCIAGDIYLGRQL 80
F ++ C G + G +L
Sbjct: 340 FLGVLACCSYTGQVERGEEL 359
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 233 bits (593), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 129/406 (31%), Positives = 225/406 (55%), Gaps = 4/406 (0%)
Query: 191 LVRNVFSGCSLCDMYAKCGFL-PSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIF 249
L NV L Y+K L P++ + F+ + ++ SWN II F+ SG A+++I +F
Sbjct: 62 LYSNVVLSSKLVLAYSKLNHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLF 121
Query: 250 RQMMHIGLI-PDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTK 308
+M + PD T +L AC++ G IH +K+GF+ + + ++L+ MY
Sbjct: 122 LRMWRESCVRPDDFTLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVD 181
Query: 309 CSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITN 368
L A +F+ + +++ + A+ +Q +A +F++M +S + + + +
Sbjct: 182 MGKLLHARKLFDDMPVRDSVL-YTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVS 240
Query: 369 LLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPN 428
LL C +L +L+ G VH + ++ L +++ N + DMY KC + +A VF + +
Sbjct: 241 LLMACGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMSRRD 300
Query: 429 VISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYN 488
VISWSSLI+GY + G + LF +M G+ PN VT++GVLSAC+H GLVE+ W LY
Sbjct: 301 VISWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAHGGLVEKSW-LYF 359
Query: 489 TMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTLLSSCKTHGNV 548
+ +E I P +H++ + D ++RAG L EAE F+ PD +LS CK +GNV
Sbjct: 360 RLMQEYNIVPELKHYASVADCMSRAGLLEEAEKFLEDMPVKPDEAVMGAVLSGCKVYGNV 419
Query: 549 DIAERAAENILKLDPSNSAALVLLSSIHASAGNWEDVAKLRKVLDD 594
++ ER A +++L P ++ V L+ ++++AG +++ LR+ + +
Sbjct: 420 EVGERVARELIQLKPRKASYYVTLAGLYSAAGRFDEAESLRQWMKE 465
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 87/326 (26%), Positives = 163/326 (50%), Gaps = 2/326 (0%)
Query: 14 VFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLR-SGFFPDQLTFGSIIKACCIAG 72
VF M RN+ SW +I +S++G ++++ ++++M R S PD T I++AC +
Sbjct: 89 VFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRMWRESCVRPDDFTLPLILRACSASR 148
Query: 73 DIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIKDLISWSSMIR 132
+ G +H +K GF L + L+ MY + G++ HA +F + ++D + +++M
Sbjct: 149 EAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDDMPVRDSVLYTAMFG 208
Query: 133 GFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLV 192
G+ Q G + L +FR+M G + + V+ S+ AC L ++G+ +HG C +
Sbjct: 209 GYVQQGEAMLGLAMFREMGYSG-FALDSVVMVSLLMACGQLGALKHGKSVHGWCIRRCSC 267
Query: 193 RNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQM 252
+ G ++ DMY KC L A T F + D++SW+++I + GD + +F +M
Sbjct: 268 LGLNLGNAITDMYVKCSILDYAHTVFVNMSRRDVISWSSLILGYGLDGDVVMSFKLFDEM 327
Query: 253 MHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNL 312
+ G+ P+++TFL +L AC + + + + E+ Y S+ ++ L
Sbjct: 328 LKEGIEPNAVTFLGVLSACAHGGLVEKSWLYFRLMQEYNIVPELKHYASVADCMSRAGLL 387
Query: 313 HDALSVFEAISKNANLVSWNAILSAC 338
+A E + + A+LS C
Sbjct: 388 EEAEKFLEDMPVKPDEAVMGAVLSGC 413
Score = 140 bits (352), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 114/437 (26%), Positives = 196/437 (44%), Gaps = 48/437 (10%)
Query: 92 HLVAQNGLISMYTNFGQVAHAS-DVFTMISIKDLISWSSMIRGFTQLGYEIEALYLFRDM 150
++V + L+ Y+ + S VF + +++ SW+ +I F++ G+ +++ LF M
Sbjct: 65 NVVLSSKLVLAYSKLNHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRM 124
Query: 151 LRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGF 210
R+ +P++F L + ACS+ E + G IH +C K G ++F +L MY G
Sbjct: 125 WRESCVRPDDFTLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGK 184
Query: 211 LPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCA 270
L A+ F + D V + A+ + G+A +++FR+M + G DS+ +SLL A
Sbjct: 185 LLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMA 244
Query: 271 CTSPMALNQGMQIHSYIVK----VGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNA 326
C AL G +H + ++ +G N L N++ MY KCS L A +VF +S+
Sbjct: 245 CGQLGALKHGKSVHGWCIRRCSCLGLN----LGNAITDMYVKCSILDYAHTVFVNMSRR- 299
Query: 327 NLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVH 386
+++SW++++ +F+LF +ML +PN +T +L CA
Sbjct: 300 DVISWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAH----------- 348
Query: 387 CFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGH 446
GLV + L+ Y + H V D +GL
Sbjct: 349 -----GGLVEKSWLYFRLMQEYNIVPELKHYASVADCMSR---------------AGLLE 388
Query: 447 EALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAR-EHFSC 505
EA + ++ V+P+E VLS C G VE G E + + P + ++
Sbjct: 389 EAEKF---LEDMPVKPDEAVMGAVLSGCKVYGNVEVG---ERVARELIQLKPRKASYYVT 442
Query: 506 MVDLLARAGCLYEAETF 522
+ L + AG EAE+
Sbjct: 443 LAGLYSAAGRFDEAESL 459
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 122/256 (47%), Gaps = 2/256 (0%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
MY G + AR++FD M +R+ V +T+M GY Q G+ + M+ +M SGF D +
Sbjct: 178 MYVDMGKLLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVV 237
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMIS 120
S++ AC G + G+ +H I+ L N + MY + +A VF +S
Sbjct: 238 MVSLLMACGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMS 297
Query: 121 IKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGR 180
+D+ISWSS+I G+ G + + LF +ML++G+ +PN V SAC+ E
Sbjct: 298 RRDVISWSSLILGYGLDGDVVMSFKLFDEMLKEGI-EPNAVTFLGVLSACAHGGLVEKSW 356
Query: 181 QIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIE-SPDLVSWNAIIAAFADS 239
+ ++ +V + S+ D ++ G L A+ + PD A+++
Sbjct: 357 LYFRLMQEYNIVPELKHYASVADCMSRAGLLEEAEKFLEDMPVKPDEAVMGAVLSGCKVY 416
Query: 240 GDANEAISIFRQMMHI 255
G+ + R+++ +
Sbjct: 417 GNVEVGERVARELIQL 432
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 229 bits (583), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 150/566 (26%), Positives = 280/566 (49%), Gaps = 76/566 (13%)
Query: 97 NGLISMYTNFGQVAHASDVFTMISI-KDLISWSSMIRGFTQL-GYEIEALYLFRDMLRQG 154
N +I+ Y F V A ++F + +DLI++++++ GF + G E EA+ +F +M R+
Sbjct: 58 NAVIAAYVKFNNVKEARELFESDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKE 117
Query: 155 VYQP--NEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCG--- 209
++F + ++ + L YG Q+HG+ K G F+ SL MY+KCG
Sbjct: 118 KDDIWIDDFTVTTMVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFK 177
Query: 210 ------------FLPS------------------AKTAFYQ-IESPDLVSWNAIIAAFAD 238
F+ S A + F++ E D +SWN +IA +A
Sbjct: 178 EVCNIFNGSCVEFVDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQ 237
Query: 239 SGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVAL 298
+G EA+ + M GL D +F ++L +S +L G ++H+ ++K G +
Sbjct: 238 NGYEEEALKMAVSMEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFV 297
Query: 299 YNSLLTMYTKCSNLH-------------------------------DALSVFEAISKNAN 327
+ ++ +Y KC N+ +A +F+++S+ N
Sbjct: 298 SSGIVDVYCKCGNMKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEK-N 356
Query: 328 LVSWNAILSACLQHKQAGETFRLFKQMLFSE-NKPNMITITNLLGTCAELASLEVGNQVH 386
LV W A+ L +Q L + + +E N P+ + + ++LG C+ A +E G ++H
Sbjct: 357 LVVWTAMFLGYLNLRQPDSVLELARAFIANETNTPDSLVMVSVLGACSLQAYMEPGKEIH 416
Query: 387 CFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGH 446
S+++G+++D + +DMY+KCG+V +A+R+FDS+ + + ++++I G A G
Sbjct: 417 GHSLRTGILMDKKLVTAFVDMYSKCGNVEYAERIFDSSFERDTVMYNAMIAGCAHHGHEA 476
Query: 447 EALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCM 506
++ F M G +P+E+T++ +LSAC H GLV EG + +M E I P H++CM
Sbjct: 477 KSFQHFEDMTEGGFKPDEITFMALLSACRHRGLVLEGEKYFKSMIEAYNISPETGHYTCM 536
Query: 507 VDLLARAGCLYEAETFIRKTGFD---PDITTWKTLLSSCKTHGNVDIAERAAENILKLDP 563
+DL +A L +A + G D D L++C + N ++ + E +L ++
Sbjct: 537 IDLYGKAYRLDKAIELME--GIDQVEKDAVILGAFLNACSWNKNTELVKEVEEKLLVIEG 594
Query: 564 SNSAALVLLSSIHASAGNWEDVAKLR 589
SN + + +++ +AS+G W+++ ++R
Sbjct: 595 SNGSRYIQIANAYASSGRWDEMQRIR 620
Score = 157 bits (396), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 118/475 (24%), Positives = 203/475 (42%), Gaps = 104/475 (21%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQ------------------------- 35
+Y K G +++AR VFD M RNV SW ++I+ Y +
Sbjct: 32 LYSKSGLLREARNVFDEMLERNVYSWNAVIAAYVKFNNVKEARELFESDNCERDLITYNT 91
Query: 36 --------NGQGNEAVVMYIQMLRS---GFFPDQLTFGSIIKACCIAGDIYLGRQLHAHV 84
+G +EA+ M+ +M R + D T +++K +++ G QLH +
Sbjct: 92 LLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDFTVTTMVKLSAKLTNVFYGEQLHGVL 151
Query: 85 IKSGFGGHLVAQNGLISMYTNFGQVAHASDVFT--------------MIS---------- 120
+K+G G A + LI MY+ G+ ++F MI+
Sbjct: 152 VKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSCVEFVDSVARNAMIAAYCREGDIDK 211
Query: 121 ----------IKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSAC 170
+ D ISW+++I G+ Q GYE EAL + M G+ + +E G+V +
Sbjct: 212 ALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVSMEENGL-KWDEHSFGAVLNVL 270
Query: 171 SSLLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWN 230
SSL + G+++H K G N F + D+Y KCG + A++A +L S +
Sbjct: 271 SSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLYGFGNLYSAS 330
Query: 231 AIIAAFADSGDANEAISIFRQMMHIGLI-------------------------------- 258
++I ++ G EA +F + L+
Sbjct: 331 SMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARAFIANETNT 390
Query: 259 PDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSV 318
PDS+ +S+L AC+ + G +IH + ++ G + L + + MY+KC N+ A +
Sbjct: 391 PDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKCGNVEYAERI 450
Query: 319 FEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTC 373
F++ S + V +NA+++ C H ++F+ F+ M KP+ IT LL C
Sbjct: 451 FDS-SFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTEGGFKPDEITFMALLSAC 504
Score = 149 bits (377), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 110/403 (27%), Positives = 185/403 (45%), Gaps = 36/403 (8%)
Query: 2 YGKCGSMKDARQVF-DAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
Y + G + A VF L + +SW ++I+GY+QNG EA+ M + M +G D+ +
Sbjct: 203 YCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVSMEENGLKWDEHS 262
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSG------------------------------FG 90
FG+++ + +G+++HA V+K+G +G
Sbjct: 263 FGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLYG 322
Query: 91 -GHLVAQNGLISMYTNFGQVAHASDVFTMISIKDLISWSSMIRGFTQLGYEIEALYLFRD 149
G+L + + +I Y++ G++ A +F +S K+L+ W++M G+ L L L R
Sbjct: 323 FGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARA 382
Query: 150 MLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCG 209
+ P+ V+ SV ACS E G++IHG + G++ + + DMY+KCG
Sbjct: 383 FIANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKCG 442
Query: 210 FLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLC 269
+ A+ F D V +NA+IA A G ++ F M G PD ITF++LL
Sbjct: 443 NVEYAERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTEGGFKPDEITFMALLS 502
Query: 270 ACTSPMALNQGMQ-IHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISK-NAN 327
AC + +G + S I + E Y ++ +Y K L A+ + E I + +
Sbjct: 503 ACRHRGLVLEGEKYFKSMIEAYNISPETGHYTCMIDLYGKAYRLDKAIELMEGIDQVEKD 562
Query: 328 LVSWNAILSACLQHKQAGETFRLFKQMLFSE--NKPNMITITN 368
V A L+AC +K + +++L E N I I N
Sbjct: 563 AVILGAFLNACSWNKNTELVKEVEEKLLVIEGSNGSRYIQIAN 605
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 99/224 (44%), Gaps = 38/224 (16%)
Query: 292 FNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQ-AGETFRL 350
+ V +N+++ Y K +N+ +A +FE+ + +L+++N +LS + E +
Sbjct: 50 LERNVYSWNAVIAAYVKFNNVKEARELFESDNCERDLITYNTLLSGFAKTDGCESEAIEM 109
Query: 351 FKQMLFSENKPNMI---TITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDM 407
F +M E I T+T ++ A+L ++ G Q+H VK+G + LI M
Sbjct: 110 FGEMHRKEKDDIWIDDFTVTTMVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHM 169
Query: 408 YAKCGSVIHAQRVFDST-------------------------------ENP---NVISWS 433
Y+KCG +F+ + NP + ISW+
Sbjct: 170 YSKCGKFKEVCNIFNGSCVEFVDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWN 229
Query: 434 SLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHI 477
+LI GYA +G EAL + M G++ +E ++ VL+ S +
Sbjct: 230 TLIAGYAQNGYEEEALKMAVSMEENGLKWDEHSFGAVLNVLSSL 273
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 51/87 (58%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
MY KCG+++ A ++FD+ R+ V + +MI+G + +G ++ + M GF PD++T
Sbjct: 437 MYSKCGNVEYAERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTEGGFKPDEIT 496
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKS 87
F +++ AC G + G + +I++
Sbjct: 497 FMALLSACRHRGLVLEGEKYFKSMIEA 523
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 227 bits (579), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 138/442 (31%), Positives = 240/442 (54%), Gaps = 20/442 (4%)
Query: 165 SVFSACSSLLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESP 224
++ S C SL + +QIH GL + + L + + L A + QI +P
Sbjct: 14 NLISKCKSL---QNLKQIHAQIITIGLSHHTYPLSKLLHLSSTVC-LSYALSILRQIPNP 69
Query: 225 DLVSWNAIIAAFADSGDANE---AISIFRQMMHIG---LIPDSITFLSLLCACTSPMALN 278
+ +N +I++ + ++ + A S++ Q++ + P+ T+ SL A +
Sbjct: 70 SVFLYNTLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSLFKASGFDAQWH 129
Query: 279 Q-GMQIHSYIVKV--GFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAIL 335
+ G +H++++K N + + +L+ Y C L +A S+FE I + +L +WN +L
Sbjct: 130 RHGRALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFERI-REPDLATWNTLL 188
Query: 336 SACLQHKQAG---ETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKS 392
+A ++ E LF +M + +PN +++ L+ +CA L G H + +K+
Sbjct: 189 AAYANSEEIDSDEEVLLLFMRM---QVRPNELSLVALIKSCANLGEFVRGVWAHVYVLKN 245
Query: 393 GLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLF 452
L L+ V LID+Y+KCG + A++VFD +V ++++I G A+ G G E + L+
Sbjct: 246 NLTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELY 305
Query: 453 RKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLAR 512
+ + + G+ P+ T+V +SACSH GLV+EG ++N+M+ GI P EH+ C+VDLL R
Sbjct: 306 KSLISQGLVPDSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGR 365
Query: 513 AGCLYEAETFIRKTGFDPDITTWKTLLSSCKTHGNVDIAERAAENILKLDPSNSAALVLL 572
+G L EAE I+K P+ T W++ L S +THG+ + E A +++L L+ NS VLL
Sbjct: 366 SGRLEEAEECIKKMPVKPNATLWRSFLGSSQTHGDFERGEIALKHLLGLEFENSGNYVLL 425
Query: 573 SSIHASAGNWEDVAKLRKVLDD 594
S+I+A W DV K R+++ D
Sbjct: 426 SNIYAGVNRWTDVEKTRELMKD 447
Score = 136 bits (342), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 101/355 (28%), Positives = 171/355 (48%), Gaps = 17/355 (4%)
Query: 27 TSMISGYSQNGQGNEAVVMYIQML--RSGFF-PDQLTFGSIIKACCIAGDIYL-GRQLHA 82
+S++S ++ Q + A +Y Q+L RS F P++ T+ S+ KA + GR LHA
Sbjct: 79 SSIVSNHNST-QTHLAFSLYDQILSSRSNFVRPNEFTYPSLFKASGFDAQWHRHGRALHA 137
Query: 83 HVIK--SGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIKDLISWSSMIRGFT---QL 137
HV+K Q L+ Y N G++ A +F I DL +W++++ + ++
Sbjct: 138 HVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFERIREPDLATWNTLLAAYANSEEI 197
Query: 138 GYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFS 197
+ E L LF M +PNE L ++ +C++L E G H K L N F
Sbjct: 198 DSDEEVLLLFMRM----QVRPNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQFV 253
Query: 198 GCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGL 257
G SL D+Y+KCG L A+ F ++ D+ +NA+I A G E I +++ ++ GL
Sbjct: 254 GTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGL 313
Query: 258 IPDSITFLSLLCACTSPMALNQGMQIHSYIVKV-GFNKEVALYNSLLTMYTKCSNLHDAL 316
+PDS TF+ + AC+ +++G+QI + + V G +V Y L+ + + L +A
Sbjct: 314 VPDSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEAE 373
Query: 317 SVFEAISKNANLVSWNAILSACLQHK--QAGETFRLFKQMLFSENKPNMITITNL 369
+ + N W + L + H + GE L EN N + ++N+
Sbjct: 374 ECIKKMPVKPNATLWRSFLGSSQTHGDFERGEIALKHLLGLEFENSGNYVLLSNI 428
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 120/243 (49%), Gaps = 3/243 (1%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
Y CG +++AR +F+ + ++ +W ++++ Y+ + + + + + +R P++L+
Sbjct: 159 FYANCGKLREARSLFERIREPDLATWNTLLAAYANSEEIDSDEEVLLLFMRMQVRPNELS 218
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMIS 120
++IK+C G+ G H +V+K+ + LI +Y+ G ++ A VF +S
Sbjct: 219 LVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVFDEMS 278
Query: 121 IKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGR 180
+D+ +++MIRG G+ E + L++ ++ QG+ P+ SACS + G
Sbjct: 279 QRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLV-PDSATFVVTISACSHSGLVDEGL 337
Query: 181 QI-HGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIE-SPDLVSWNAIIAAFAD 238
QI + + A +G+ V L D+ + G L A+ ++ P+ W + + +
Sbjct: 338 QIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEAEECIKKMPVKPNATLWRSFLGSSQT 397
Query: 239 SGD 241
GD
Sbjct: 398 HGD 400
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 226 bits (576), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 136/449 (30%), Positives = 232/449 (51%), Gaps = 44/449 (9%)
Query: 180 RQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPS---AKTAFYQIESPDLVSWNAIIAAF 236
+Q+H C + G+ D+ + +P+ A+ F ++ +N +I A+
Sbjct: 5 KQLHAHCLRTGVDETK-------DLLQRLLLIPNLVYARKLFDHHQNSCTFLYNKLIQAY 57
Query: 237 ADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGF---- 292
+E+I ++ + GL P TF + A S + +HS + GF
Sbjct: 58 YVHHQPHESIVLYNLLSFDGLRPSHHTFNFIFAASASFSSARPLRLLHSQFFRSGFESDS 117
Query: 293 ---------------------------NKEVALYNSLLTMYTKCSNLHDALSVFEAISKN 325
++V ++N+++T Y + ++ A+ +F+++ +
Sbjct: 118 FCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSMPRK 177
Query: 326 ANLVSWNAILSACLQHKQAGETFRLFKQMLFSEN-KPNMITITNLLGTCAELASLEVGNQ 384
N+ SW ++S Q+ E ++F M ++ KPN IT+ ++L CA L LE+G +
Sbjct: 178 -NVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRR 236
Query: 385 VHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENP-NVISWSSLIVGYAMSG 443
+ ++ ++G ++ V N I+MY+KCG + A+R+F+ N N+ SW+S+I A G
Sbjct: 237 LEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHG 296
Query: 444 LGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHF 503
EAL LF +M G +P+ VT+VG+L AC H G+V +G L+ +MEE I P EH+
Sbjct: 297 KHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKLEHY 356
Query: 504 SCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTLLSSCKTHGNVDIAERAAENILKLDP 563
CM+DLL R G L EA I+ PD W TLL +C HGNV+IAE A+E + KL+P
Sbjct: 357 GCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEIAEIASEALFKLEP 416
Query: 564 SNSAALVLLSSIHASAGNWEDVAKLRKVL 592
+N V++S+I+A+ W+ V ++RK++
Sbjct: 417 TNPGNCVIMSNIYAANEKWDGVLRMRKLM 445
Score = 146 bits (369), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 103/395 (26%), Positives = 178/395 (45%), Gaps = 37/395 (9%)
Query: 11 ARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTFGSIIKACCI 70
AR++FD + +I Y + Q +E++V+Y + G P TF I A
Sbjct: 35 ARKLFDHHQNSCTFLYNKLIQAYYVHHQPHESIVLYNLLSFDGLRPSHHTFNFIFAASAS 94
Query: 71 AGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIKDL------ 124
R LH+ +SGF LI+ Y G + A VF +S +D+
Sbjct: 95 FSSARPLRLLHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAM 154
Query: 125 -------------------------ISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPN 159
SW+++I GF+Q G EAL +F M + +PN
Sbjct: 155 ITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPN 214
Query: 160 EFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFY 219
+ SV AC++L E E GR++ G + G N++ + +MY+KCG + AK F
Sbjct: 215 HITVVSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFE 274
Query: 220 QI-ESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALN 278
++ +L SWN++I + A G +EA+++F QM+ G PD++TF+ LL AC +
Sbjct: 275 ELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVV 334
Query: 279 QGMQIHSYIVKV-GFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSA 337
+G ++ + +V + ++ Y ++ + + L +A + + + + V W +L A
Sbjct: 335 KGQELFKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGA 394
Query: 338 CLQHKQAGETFRLFKQMLFS---ENKPNMITITNL 369
C H E + + LF N N + ++N+
Sbjct: 395 CSFHGNV-EIAEIASEALFKLEPTNPGNCVIMSNI 428
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 133/273 (48%), Gaps = 36/273 (13%)
Query: 2 YGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLR-SGFFPDQLT 60
Y + G MK A ++FD+M +NV SWT++ISG+SQNG +EA+ M++ M + P+ +T
Sbjct: 158 YQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHIT 217
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMI- 119
S++ AC G++ +GR+L + ++GF ++ N I MY+ G + A +F +
Sbjct: 218 VVSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELG 277
Query: 120 SIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYG 179
+ ++L SW+SMI G EAL LF MLR+G +P+ + AC
Sbjct: 278 NQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREG-EKPDAVTFVGLLLAC--------- 327
Query: 180 RQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADS 239
+HG M K L + ++I SP L + +I
Sbjct: 328 --VHG------------------GMVVKGQELFKSMEEVHKI-SPKLEHYGCMIDLLGRV 366
Query: 240 GDANEAISIFRQMMHIGLIPDSITFLSLLCACT 272
G EA + + M + PD++ + +LL AC+
Sbjct: 367 GKLQEAYDLIKTM---PMKPDAVVWGTLLGACS 396
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 101/441 (22%), Positives = 172/441 (39%), Gaps = 80/441 (18%)
Query: 78 RQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIKDLISWSSMIRGFTQL 137
+QLHAH +++G L+ + +A +F ++ +I+ +
Sbjct: 5 KQLHAHCLRTGVD----ETKDLLQRLLLIPNLVYARKLFDHHQNSCTFLYNKLIQAYYVH 60
Query: 138 GYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFS 197
E++ L+ + G+ +P+ +F+A +S R +H + G + F
Sbjct: 61 HQPHESIVLYNLLSFDGL-RPSHHTFNFIFAASASFSSARPLRLLHSQFFRSGFESDSFC 119
Query: 198 GCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGL 257
+L YAK G L A+ F ++ D+ WNA+I + GD A+ +F M +
Sbjct: 120 CTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSMPRKNV 179
Query: 258 I--------------------------------PDSITFLSLLCACTSPMALNQGMQIHS 285
P+ IT +S+L AC + L G ++
Sbjct: 180 TSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRRLEG 239
Query: 286 YIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAG 345
Y + GF + + N+ + MY+KC + A +FE + NL SWN+++ + H +
Sbjct: 240 YARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHGKHD 299
Query: 346 ETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLI 405
E LF QML KP+ +T LL C VH
Sbjct: 300 EALTLFAQMLREGEKPDAVTFVGLLLAC-----------VH------------------- 329
Query: 406 DMYAKCGSVIHAQRVFDSTE-----NPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGV 460
G V+ Q +F S E +P + + +I G EA +L + M +
Sbjct: 330 -----GGMVVKGQELFKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTM---PM 381
Query: 461 RPNEVTYVGVLSACSHIGLVE 481
+P+ V + +L ACS G VE
Sbjct: 382 KPDAVVWGTLLGACSFHGNVE 402
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 129/307 (42%), Gaps = 38/307 (12%)
Query: 277 LNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILS 336
+N Q+H++ ++ G ++ L LL + NL A +F+ +N+ +N ++
Sbjct: 1 MNGIKQLHAHCLRTGVDETKDLLQRLLLI----PNLVYARKLFDH-HQNSCTFLYNKLIQ 55
Query: 337 ACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVL 396
A H Q E+ L+ + F +P+ T + A +S +H +SG
Sbjct: 56 AYYVHHQPHESIVLYNLLSFDGLRPSHHTFNFIFAASASFSSARPLRLLHSQFFRSGFES 115
Query: 397 DVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKM- 455
D LI YAK G++ A+RVFD +V W+++I GY G A+ LF M
Sbjct: 116 DSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSMP 175
Query: 456 -------------------------------RNLGVRPNEVTYVGVLSACSHIGLVEEGW 484
++ V+PN +T V VL AC+++G +E G
Sbjct: 176 RKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGR 235
Query: 485 NLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTLLSSCKT 544
L E G + +++ ++ G + A+ + G ++ +W +++ S T
Sbjct: 236 RLEGYAREN-GFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLAT 294
Query: 545 HGNVDIA 551
HG D A
Sbjct: 295 HGKHDEA 301
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 73/134 (54%), Gaps = 3/134 (2%)
Query: 1 MYGKCGSMKDARQVFDAM-HLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQL 59
MY KCG + A+++F+ + + RN+ SW SMI + +G+ +EA+ ++ QMLR G PD +
Sbjct: 259 MYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAV 318
Query: 60 TFGSIIKACCIAGDIYLGRQLHAHVIK-SGFGGHLVAQNGLISMYTNFGQVAHASDVFTM 118
TF ++ AC G + G++L + + L +I + G++ A D+
Sbjct: 319 TFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKT 378
Query: 119 ISIK-DLISWSSMI 131
+ +K D + W +++
Sbjct: 379 MPMKPDAVVWGTLL 392
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 226 bits (575), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 139/463 (30%), Positives = 235/463 (50%), Gaps = 42/463 (9%)
Query: 168 SACSSLLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPS----AKTAFYQIES 223
+ CS++ E +QIH K GL+ + + + A C PS A F +I
Sbjct: 33 TQCSTMREL---KQIHASLIKTGLISDTVTASRV---LAFCCASPSDMNYAYLVFTRINH 86
Query: 224 PDLVSWNAIIAAFADSGDANEAISIFRQMM--HIGLIPDSITFLSLLCACTSPMALNQGM 281
+ WN II F+ S AISIF M+ + P +T+ S+ A G
Sbjct: 87 KNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGR 146
Query: 282 QIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVF------EAISKNA--------- 326
Q+H ++K G + + N++L MY C L +A +F + ++ N+
Sbjct: 147 QLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCG 206
Query: 327 ---------------NLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLG 371
N VSWN+++S +++ + + +F++M + KP+ T+ +LL
Sbjct: 207 LIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLN 266
Query: 372 TCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVIS 431
CA L + E G +H + V++ L+ V LIDMY KCG + VF+ +
Sbjct: 267 ACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSC 326
Query: 432 WSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTME 491
W+S+I+G A +G A++LF ++ G+ P+ V+++GVL+AC+H G V + M+
Sbjct: 327 WNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMK 386
Query: 492 EELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTLLSSCKTHGNVDIA 551
E+ I P+ +H++ MV++L AG L EAE I+ + D W +LLS+C+ GNV++A
Sbjct: 387 EKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEMA 446
Query: 552 ERAAENILKLDPSNSAALVLLSSIHASAGNWEDVAKLRKVLDD 594
+RAA+ + KLDP + VLLS+ +AS G +E+ + R ++ +
Sbjct: 447 KRAAKCLKKLDPDETCGYVLLSNAYASYGLFEEAVEQRLLMKE 489
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 101/371 (27%), Positives = 170/371 (45%), Gaps = 38/371 (10%)
Query: 5 CGSMKD---ARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSG--FFPDQL 59
C S D A VF ++ +N W ++I G+S++ A+ ++I ML S P +L
Sbjct: 68 CASPSDMNYAYLVFTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRL 127
Query: 60 TFGSIIKACCIAGDIYLGRQLHAHVIKSGF------------------------------ 89
T+ S+ KA G GRQLH VIK G
Sbjct: 128 TYPSVFKAYGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGM 187
Query: 90 -GGHLVAQNGLISMYTNFGQVAHASDVFTMISIKDLISWSSMIRGFTQLGYEIEALYLFR 148
G +VA N +I + G + A ++F + ++ +SW+SMI GF + G +AL +FR
Sbjct: 188 IGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFR 247
Query: 149 DMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKC 208
+M + V +P+ F + S+ +AC+ L E GR IH + N +L DMY KC
Sbjct: 248 EMQEKDV-KPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKC 306
Query: 209 GFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLL 268
G + F L WN++I A++G A+ +F ++ GL PDS++F+ +L
Sbjct: 307 GCIEEGLNVFECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVL 366
Query: 269 CACTSPMALNQGMQIHSYIV-KVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNAN 327
AC +++ + + K + Y ++ + L +A ++ + + +
Sbjct: 367 TACAHSGEVHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEED 426
Query: 328 LVSWNAILSAC 338
V W+++LSAC
Sbjct: 427 TVIWSSLLSAC 437
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 111/437 (25%), Positives = 188/437 (43%), Gaps = 67/437 (15%)
Query: 78 RQLHAHVIKSGFGGHLVAQNGLISMY-TNFGQVAHASDVFTMISIKDLISWSSMIRGFTQ 136
+Q+HA +IK+G V + +++ + + +A VFT I+ K+ W+++IRGF++
Sbjct: 42 KQIHASLIKTGLISDTVTASRVLAFCCASPSDMNYAYLVFTRINHKNPFVWNTIIRGFSR 101
Query: 137 LGYEIEALYLFRDML-RQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNV 195
+ A+ +F DML +P SVF A L + GRQ+HG+ K GL +
Sbjct: 102 SSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIKEGLEDDS 161
Query: 196 FSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFAD----------------- 238
F ++ MY CG L A F + D+V+WN++I FA
Sbjct: 162 FIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQR 221
Query: 239 --------------SGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIH 284
+G +A+ +FR+M + PD T +SLL AC A QG IH
Sbjct: 222 NGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIH 281
Query: 285 SYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQA 344
YIV+ F + +L+ MY KC + + L+VFE K L WN+++ +
Sbjct: 282 EYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKK-QLSCWNSMILGLANNGFE 340
Query: 345 GETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGL 404
LF ++ S +P+ ++ +L CA + ++ + ++
Sbjct: 341 ERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMI--------- 391
Query: 405 IDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNE 464
P++ ++ ++ +GL EA L ++N+ V +
Sbjct: 392 ---------------------EPSIKHYTLMVNVLGGAGLLEEAEAL---IKNMPVEEDT 427
Query: 465 VTYVGVLSACSHIGLVE 481
V + +LSAC IG VE
Sbjct: 428 VIWSSLLSACRKIGNVE 444
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 125/270 (46%), Gaps = 34/270 (12%)
Query: 2 YGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTF 61
+ KCG + A+ +FD M RN VSW SMISG+ +NG+ +A+ M+ +M PD T
Sbjct: 202 FAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTM 261
Query: 62 GSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISI 121
S++ AC G GR +H +++++ F + + LI MY G + +VF
Sbjct: 262 VSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPK 321
Query: 122 KDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQ 181
K L W+SMI G G+E A+ LF ++ R G+ +P+ V +AC+ + +
Sbjct: 322 KQLSCWNSMILGLANNGFEERAMDLFSELERSGL-EPDSVSFIGVLTACA------HSGE 374
Query: 182 IHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGD 241
+H F L++ Y IE P + + ++ +G
Sbjct: 375 VHRADEFFRLMKEK-----------------------YMIE-PSIKHYTLMVNVLGGAGL 410
Query: 242 ANEAISIFRQMMHIGLIPDSITFLSLLCAC 271
EA ++ + M + D++ + SLL AC
Sbjct: 411 LEEAEALIKNM---PVEEDTVIWSSLLSAC 437
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/144 (22%), Positives = 72/144 (50%), Gaps = 10/144 (6%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
MY KCG +++ VF+ + + W SMI G + NG A+ ++ ++ RSG PD ++
Sbjct: 302 MYCKCGCIEEGLNVFECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVS 361
Query: 61 FGSIIKACCIAGDIYLGRQL-----HAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDV 115
F ++ AC +G+++ + ++I+ + + ++++ G + A +
Sbjct: 362 FIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSIKHYTL----MVNVLGGAGLLEEAEAL 417
Query: 116 FTMISI-KDLISWSSMIRGFTQLG 138
+ + +D + WSS++ ++G
Sbjct: 418 IKNMPVEEDTVIWSSLLSACRKIG 441
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 226 bits (575), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 158/577 (27%), Positives = 290/577 (50%), Gaps = 59/577 (10%)
Query: 64 IIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYT--------NFGQ-VAHASD 114
++ +C + D+ Q+H +IK+G + ++ + +F + V H
Sbjct: 18 VLGSCKTSDDV---NQIHGRLIKTGIIKNSNLTTRIVLAFASSRRPYLADFARCVFHEYH 74
Query: 115 V--FTMISIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSS 172
V F+ ++D W+++I+ + +AL L ML GV ++F L V ACS
Sbjct: 75 VCSFSFGEVEDPFLWNAVIKSHSHGKDPRQALLLLCLMLENGV-SVDKFSLSLVLKACSR 133
Query: 173 LLEPEYGRQIHGICAKFGLVRNVF-----------SGC--------------------SL 201
L + G QIHG K GL ++F GC S+
Sbjct: 134 LGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSM 193
Query: 202 CDMYAKCGFLPSAKTAF--YQIESPDLVSWNAIIAAFADSGDANE-AISIFRQMMHIGLI 258
D Y KCG + SA+ F +E +L+SWN++I+ +A + D + A +F M
Sbjct: 194 IDGYVKCGLIVSARELFDLMPMEMKNLISWNSMISGYAQTSDGVDIASKLFADMPE---- 249
Query: 259 PDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSV 318
D I++ S++ + + + + ++V + +++ Y K +H A ++
Sbjct: 250 KDLISWNSMIDGYVKHGRIEDAKGLFDVMPR----RDVVTWATMIDGYAKLGFVHHAKTL 305
Query: 319 FEAISKNANLVSWNAILSACLQHKQAGETFRLFKQM-LFSENKPNMITITNLLGTCAELA 377
F+ + + ++V++N++++ +Q+K E +F M S P+ T+ +L A+L
Sbjct: 306 FDQMP-HRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLG 364
Query: 378 SLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIV 437
L +H + V+ L + LIDMY+KCGS+ HA VF+ EN ++ W+++I
Sbjct: 365 RLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIG 424
Query: 438 GYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIP 497
G A+ GLG A ++ ++ L ++P+++T+VGVL+ACSH GLV+EG + M + I
Sbjct: 425 GLAIHGLGESAFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIE 484
Query: 498 PAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTLLSSCKTHGNVDIAERAAEN 557
P +H+ CMVD+L+R+G + A+ I + +P+ W+T L++C H + E A++
Sbjct: 485 PRLQHYGCMVDILSRSGSIELAKNLIEEMPVEPNDVIWRTFLTACSHHKEFETGELVAKH 544
Query: 558 ILKLDPSNSAALVLLSSIHASAGNWEDVAKLRKVLDD 594
++ N ++ VLLS+++AS G W+DV ++R ++ +
Sbjct: 545 LILQAGYNPSSYVLLSNMYASFGMWKDVRRVRTMMKE 581
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 133/508 (26%), Positives = 223/508 (43%), Gaps = 70/508 (13%)
Query: 11 ARQVFDAMHL--------RNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTFG 62
AR VF H+ + W ++I +S +A+++ ML +G D+ +
Sbjct: 66 ARCVFHEYHVCSFSFGEVEDPFLWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLS 125
Query: 63 SIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIK 122
++KAC G + G Q+H + K+G L QN LI +Y G + + +F + +
Sbjct: 126 LVLKACSRLGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKR 185
Query: 123 DLISWSSMIRGFTQLGYEIEALYLFR--DMLRQGVYQPNEFVLGSVFSA-----CSSLLE 175
D +S++SMI G+ + G + A LF M + + N + G ++ S L
Sbjct: 186 DSVSYNSMIDGYVKCGLIVSARELFDLMPMEMKNLISWNSMISGYAQTSDGVDIASKLFA 245
Query: 176 --PE-----YGRQIHGICAKFGLV------------RNVFSGCSLCDMYAKCGFLPSAKT 216
PE + I G K G + R+V + ++ D YAK GF+ AKT
Sbjct: 246 DMPEKDLISWNSMIDGY-VKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKT 304
Query: 217 AFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQM-MHIGLIPDSITFLSLLCACTSPM 275
F Q+ D+V++N+++A + + EA+ IF M L+PD T + +L A
Sbjct: 305 LFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLG 364
Query: 276 ALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAIL 335
L++ + +H YIV+ F L +L+ MY+KC ++ A+ VFE I +N ++ WNA++
Sbjct: 365 RLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGI-ENKSIDHWNAMI 423
Query: 336 SACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLV 395
H F + Q+ KP+ IT +L C+ H VK GL+
Sbjct: 424 GGLAIHGLGESAFDMLLQIERLSLKPDDITFVGVLNACS-----------HSGLVKEGLL 472
Query: 396 LDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKM 455
C ++ + + P + + ++ + SG A NL +M
Sbjct: 473 ---------------CFELMRRKHKIE----PRLQHYGCMVDILSRSGSIELAKNLIEEM 513
Query: 456 RNLGVRPNEVTYVGVLSACSHIGLVEEG 483
V PN+V + L+ACSH E G
Sbjct: 514 ---PVEPNDVIWRTFLTACSHHKEFETG 538
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 104/413 (25%), Positives = 184/413 (44%), Gaps = 53/413 (12%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
+Y KCG + +RQ+FD M R+ VS+ SMI GY + G A ++ M + ++
Sbjct: 165 LYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSARELFDLMPME--MKNLIS 222
Query: 61 FGSIIKACCIAGD-IYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMI 119
+ S+I D + + +L A + + L++ N +I Y G++ A +F ++
Sbjct: 223 WNSMISGYAQTSDGVDIASKLFADMPEKD----LISWNSMIDGYVKHGRIEDAKGLFDVM 278
Query: 120 SIKDLISWSSMIRGFTQLG-------------------------------YEIEALYLFR 148
+D+++W++MI G+ +LG Y +EAL +F
Sbjct: 279 PRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFS 338
Query: 149 DMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFS-----GCSLCD 203
DM ++ P++ L V A + L GR I +V F G +L D
Sbjct: 339 DMEKESHLLPDDTTLVIVLPAIAQL-----GRLSKAIDMHLYIVEKQFYLGGKLGVALID 393
Query: 204 MYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSIT 263
MY+KCG + A F IE+ + WNA+I A G A + Q+ + L PD IT
Sbjct: 394 MYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERLSLKPDDIT 453
Query: 264 FLSLLCACTSPMALNQGMQIHSYI-VKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAI 322
F+ +L AC+ + +G+ + K + Y ++ + ++ ++ A ++ E +
Sbjct: 454 FVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEM 513
Query: 323 SKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSE---NKPNMITITNLLGT 372
N V W L+AC HK+ ET L + L + N + + ++N+ +
Sbjct: 514 PVEPNDVIWRTFLTACSHHKEF-ETGELVAKHLILQAGYNPSSYVLLSNMYAS 565
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 226 bits (575), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 133/452 (29%), Positives = 229/452 (50%), Gaps = 44/452 (9%)
Query: 180 RQIH------GICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAII 233
RQIH G LV + +L D +L A + E P L + N++I
Sbjct: 23 RQIHAKLYVDGTLKDDHLVGHFVKAVALSDH----KYLDYANQILDRSEKPTLFALNSMI 78
Query: 234 AAFADSGDANEAISIFRQMMHIG--LIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVG 291
A S ++ +R+++ G L PD+ T L+ ACT G+Q+H ++ G
Sbjct: 79 RAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETGLQVHGMTIRRG 138
Query: 292 FNKEVALYNSLLTMYT-------------------------------KCSNLHDALSVFE 320
F+ + + L+++Y +C ++ A +FE
Sbjct: 139 FDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFARKLFE 198
Query: 321 AISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLE 380
+ + + ++WNA++S Q ++ E +F M K N + + ++L C +L +L+
Sbjct: 199 GMPER-DPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLGALD 257
Query: 381 VGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYA 440
G H + ++ + + V ++ L+D+YAKCG + A VF E NV +WSS + G A
Sbjct: 258 QGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSALNGLA 317
Query: 441 MSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAR 500
M+G G + L LF M+ GV PN VT+V VL CS +G V+EG +++M E GI P
Sbjct: 318 MNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNEFGIEPQL 377
Query: 501 EHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTLLSSCKTHGNVDIAERAAENILK 560
EH+ C+VDL ARAG L +A + I++ P W +LL + + + N+++ A++ +L+
Sbjct: 378 EHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRMYKNLELGVLASKKMLE 437
Query: 561 LDPSNSAALVLLSSIHASAGNWEDVAKLRKVL 592
L+ +N A VLLS+I+A + +W++V+ +R+ +
Sbjct: 438 LETANHGAYVLLSNIYADSNDWDNVSHVRQSM 469
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 93/366 (25%), Positives = 166/366 (45%), Gaps = 35/366 (9%)
Query: 11 ARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSG--FFPDQLTFGSIIKAC 68
A Q+ D + + SMI + ++ ++ Y ++L SG PD T +++AC
Sbjct: 59 ANQILDRSEKPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQAC 118
Query: 69 CIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFG--------------------- 107
G Q+H I+ GF Q GLIS+Y G
Sbjct: 119 TGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRT 178
Query: 108 ----------QVAHASDVFTMISIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQ 157
V A +F + +D I+W++MI G+ Q+G EAL +F M +GV +
Sbjct: 179 AMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGV-K 237
Query: 158 PNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTA 217
N + SV SAC+ L + GR H + + V +L D+YAKCG + A
Sbjct: 238 VNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEV 297
Query: 218 FYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMAL 277
F+ +E ++ +W++ + A +G + + +F M G+ P+++TF+S+L C+ +
Sbjct: 298 FWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFV 357
Query: 278 NQGMQ-IHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILS 336
++G + S + G ++ Y L+ +Y + L DA+S+ + + + W+++L
Sbjct: 358 DEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLH 417
Query: 337 ACLQHK 342
A +K
Sbjct: 418 ASRMYK 423
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 97/396 (24%), Positives = 176/396 (44%), Gaps = 39/396 (9%)
Query: 78 RQLHAHVIKSGF--GGHLVAQNGLISMYTNFGQVAHASDVFTMISIKDLISWSSMIRGFT 135
RQ+HA + G HLV ++ + +A+ + L + +SMIR
Sbjct: 23 RQIHAKLYVDGTLKDDHLVGHFVKAVALSDHKYLDYANQILDRSEKPTLFALNSMIRAHC 82
Query: 136 QLGYEIEALYLFRDMLRQG-VYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRN 194
+ ++ +R +L G +P+ + + + AC+ L E G Q+HG+ + G +
Sbjct: 83 KSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETGLQVHGMTIRRGFDND 142
Query: 195 VFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLV--------------------------- 227
L +YA+ G L S F I PD V
Sbjct: 143 PHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFARKLFEGMPE 202
Query: 228 ----SWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQI 283
+WNA+I+ +A G++ EA+++F M G+ + + +S+L ACT AL+QG
Sbjct: 203 RDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLGALDQGRWA 262
Query: 284 HSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQ 343
HSYI + V L +L+ +Y KC ++ A+ VF + + N+ +W++ L+ +
Sbjct: 263 HSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEK-NVYTWSSALNGLAMNGF 321
Query: 344 AGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSN- 402
+ LF M PN +T ++L C+ + ++ G Q H S+++ ++ + +
Sbjct: 322 GEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEG-QRHFDSMRNEFGIEPQLEHY 380
Query: 403 -GLIDMYAKCGSVIHAQRVFDSTE-NPNVISWSSLI 436
L+D+YA+ G + A + P+ WSSL+
Sbjct: 381 GCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLL 416
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 115/235 (48%), Gaps = 3/235 (1%)
Query: 3 GKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTFG 62
+CG + AR++F+ M R+ ++W +MISGY+Q G+ EA+ ++ M G + +
Sbjct: 185 ARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMI 244
Query: 63 SIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIK 122
S++ AC G + GR H+++ ++ + L+ +Y G + A +VF + K
Sbjct: 245 SVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEK 304
Query: 123 DLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSL-LEPEYGRQ 181
++ +WSS + G G+ + L LF M + GV PN SV CS + E R
Sbjct: 305 NVYTWSSALNGLAMNGFGEKCLELFSLMKQDGV-TPNAVTFVSVLRGCSVVGFVDEGQRH 363
Query: 182 IHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIE-SPDLVSWNAIIAA 235
+ +FG+ + L D+YA+ G L A + Q+ P W++++ A
Sbjct: 364 FDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHA 418
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 73/134 (54%), Gaps = 4/134 (2%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
+Y KCG M+ A +VF M +NV +W+S ++G + NG G + + ++ M + G P+ +T
Sbjct: 284 LYAKCGDMEKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVT 343
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSGFG--GHLVAQNGLISMYTNFGQVAHASDVFTM 118
F S+++ C + G + G Q H +++ FG L L+ +Y G++ A +
Sbjct: 344 FVSVLRGCSVVGFVDEG-QRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQ 402
Query: 119 ISIKDLIS-WSSMI 131
+ +K + WSS++
Sbjct: 403 MPMKPHAAVWSSLL 416
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 225 bits (574), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 132/405 (32%), Positives = 214/405 (52%), Gaps = 34/405 (8%)
Query: 220 QIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQ 279
Q S VSW + I +G EA F M G+ P+ ITF++LL C + ++
Sbjct: 30 QSTSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSE 89
Query: 280 --GMQIHSYIVKVGFNK-EVALYNSLLTMYTKCSNLHDALSVFEAIS-KNA--------- 326
G +H Y K+G ++ V + +++ MY+K A VF+ + KN+
Sbjct: 90 ALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDG 149
Query: 327 --------------------NLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITI 366
+L+SW A+++ ++ E F++M S KP+ + I
Sbjct: 150 YMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAI 209
Query: 367 TNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTEN 426
L C L +L G VH + + +V VSN LID+Y +CG V A++VF + E
Sbjct: 210 IAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEK 269
Query: 427 PNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNL 486
V+SW+S+IVG+A +G HE+L FRKM+ G +P+ VT+ G L+ACSH+GLVEEG
Sbjct: 270 RTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRY 329
Query: 487 YNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTLLSSCKTHG 546
+ M+ + I P EH+ C+VDL +RAG L +A ++ P+ +LL++C HG
Sbjct: 330 FQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNHG 389
Query: 547 -NVDIAERAAENILKLDPSNSAALVLLSSIHASAGNWEDVAKLRK 590
N+ +AER +++ L+ + + V+LS+++A+ G WE +K+R+
Sbjct: 390 NNIVLAERLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRR 434
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 106/355 (29%), Positives = 179/355 (50%), Gaps = 38/355 (10%)
Query: 23 VVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTFGSIIKAC--CIAGDIYLGRQL 80
VSWTS I+ ++NG+ EA + M +G P+ +TF +++ C +G LG L
Sbjct: 36 TVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGDLL 95
Query: 81 HAHVIKSGFG-GHLVAQNGLISMYTNFG-------------------------------Q 108
H + K G H++ +I MY+ G Q
Sbjct: 96 HGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQ 155
Query: 109 VAHASDVFTMISIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFS 168
V +A+ +F + +DLISW++MI GF + GY+ EAL FR+M GV +P+ + + +
Sbjct: 156 VDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGV-KPDYVAIIAALN 214
Query: 169 ACSSLLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVS 228
AC++L +G +H NV SL D+Y +CG + A+ FY +E +VS
Sbjct: 215 ACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVS 274
Query: 229 WNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIV 288
WN++I FA +G+A+E++ FR+M G PD++TF L AC+ + +G++ + I+
Sbjct: 275 WNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLR-YFQIM 333
Query: 289 KVGF--NKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQH 341
K + + + Y L+ +Y++ L DAL + +++ N V ++L+AC H
Sbjct: 334 KCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNH 388
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 128/257 (49%), Gaps = 7/257 (2%)
Query: 2 YGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTF 61
Y + G + +A ++FD M R+++SWT+MI+G+ + G EA++ + +M SG PD +
Sbjct: 150 YMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAI 209
Query: 62 GSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISI 121
+ + AC G + G +H +V+ F ++ N LI +Y G V A VF +
Sbjct: 210 IAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEK 269
Query: 122 KDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQ 181
+ ++SW+S+I GF G E+L FR M +G ++P+ +ACS + E G +
Sbjct: 270 RTVVSWNSVIVGFAANGNAHESLVYFRKMQEKG-FKPDAVTFTGALTACSHVGLVEEGLR 328
Query: 182 IHGI--CAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIE-SPDLVSWNAIIAAFAD 238
I C R GC L D+Y++ G L A + P+ V +++AA ++
Sbjct: 329 YFQIMKCDYRISPRIEHYGC-LVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSN 387
Query: 239 SGDANEAISIFRQMMHI 255
G N + R M H+
Sbjct: 388 HG--NNIVLAERLMKHL 402
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 84/172 (48%), Gaps = 34/172 (19%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
+Y +CG ++ ARQVF M R VVSW S+I G++ NG +E++V + +M GF PD +T
Sbjct: 250 LYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVT 309
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMIS 120
F + AC +HV GL+ + Q+ IS
Sbjct: 310 FTGALTAC-------------SHV-------------GLVEEGLRYFQIMKCD---YRIS 340
Query: 121 IKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSS 172
+ + + ++ +++ G +AL L + M +PNE V+GS+ +ACS+
Sbjct: 341 PR-IEHYGCLVDLYSRAGRLEDALKLVQSM----PMKPNEVVIGSLLAACSN 387
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 224 bits (570), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 133/459 (28%), Positives = 244/459 (53%), Gaps = 57/459 (12%)
Query: 183 HGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGD- 241
H +C F L+R F LC+ L A+ F + P+ + A++ A++ S
Sbjct: 56 HFLC--FKLLR--FCTLRLCN-------LSYARFIFDRFSFPNTHLYAAVLTAYSSSLPL 104
Query: 242 -ANEAISIFRQMMHIGLIPDSITFLSLLCACTSPM---ALNQGMQIHSYIVKVGFN---- 293
A+ A S FR M++ +P F+ L ++P A + + +H+++ K GF+
Sbjct: 105 HASSAFSFFRLMVNRS-VPRPNHFIYPLVLKSTPYLSSAFSTPL-VHTHLFKSGFHLYVV 162
Query: 294 ----------------------------KEVALYNSLLTMYTKCSNLHDALSVFEAISKN 325
+ V + ++L+ Y + ++ +A+++FE + +
Sbjct: 163 VQTALLHSYASSVSHITLARQLFDEMSERNVVSWTAMLSGYARSGDISNAVALFEDMPER 222
Query: 326 ANLVSWNAILSACLQHKQAGETFRLFKQMLFSEN-KPNMITITNLLGTCAELASLEVGNQ 384
++ SWNAIL+AC Q+ E LF++M+ + +PN +T+ +L CA+ +L++
Sbjct: 223 -DVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAKG 281
Query: 385 VHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGL 444
+H F+ + L DV VSN L+D+Y KCG++ A VF ++ +W+S+I +A+ G
Sbjct: 282 IHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASKKSLTAWNSMINCFALHGR 341
Query: 445 GHEALNLFRKMRNLGV---RPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPARE 501
EA+ +F +M L + +P+ +T++G+L+AC+H GLV +G ++ M GI P E
Sbjct: 342 SEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGRGYFDLMTNRFGIEPRIE 401
Query: 502 HFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTLLSSCKTHGNVDIAERAAENILKL 561
H+ C++DLL RAG EA + D W +LL++CK HG++D+AE A +N++ L
Sbjct: 402 HYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSLLNACKIHGHLDLAEVAVKNLVAL 461
Query: 562 DPSNSAALVLLSSIHASAGNWEDVAKLRKVL--DDGYDP 598
+P+N + ++++++ GNWE+ + RK++ + Y P
Sbjct: 462 NPNNGGYVAMMANLYGEMGNWEEARRARKMIKHQNAYKP 500
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 97/370 (26%), Positives = 169/370 (45%), Gaps = 39/370 (10%)
Query: 11 ARQVFDAMHLRNVVSWTSMISGYSQNG--QGNEAVVMYIQML-RSGFFPDQLTFGSIIKA 67
AR +FD N + ++++ YS + + A + M+ RS P+ + ++K+
Sbjct: 76 ARFIFDRFSFPNTHLYAAVLTAYSSSLPLHASSAFSFFRLMVNRSVPRPNHFIYPLVLKS 135
Query: 68 CCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMY-TNFGQVAHASDVFTMISIKDLIS 126
+ +H H+ KSGF ++V Q L+ Y ++ + A +F +S ++++S
Sbjct: 136 TPYLSSAFSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSERNVVS 195
Query: 127 WSSMIRGF-------------------------------TQLGYEIEALYLFRDMLRQGV 155
W++M+ G+ TQ G +EA+ LFR M+ +
Sbjct: 196 WTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPS 255
Query: 156 YQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAK 215
+PNE + V SAC+ + + IH + L +VF SL D+Y KCG L A
Sbjct: 256 IRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEAS 315
Query: 216 TAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIG---LIPDSITFLSLLCACT 272
+ F L +WN++I FA G + EAI++F +MM + + PD ITF+ LL ACT
Sbjct: 316 SVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACT 375
Query: 273 SPMALNQGMQIHSYIV-KVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSW 331
+++G + + G + Y L+ + + +AL V + A+ W
Sbjct: 376 HGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIW 435
Query: 332 NAILSACLQH 341
++L+AC H
Sbjct: 436 GSLLNACKIH 445
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 74/137 (54%), Gaps = 7/137 (5%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLR---SGFFPD 57
+YGKCG++++A VF +++ +W SMI+ ++ +G+ EA+ ++ +M++ + PD
Sbjct: 304 LYGKCGNLEEASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPD 363
Query: 58 QLTFGSIIKACCIAGDIYLGRQLHAHVIKSGFG--GHLVAQNGLISMYTNFGQVAHASDV 115
+TF ++ AC G + GR + ++ + FG + LI + G+ A +V
Sbjct: 364 HITFIGLLNACTHGGLVSKGRG-YFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEV 422
Query: 116 FTMISIK-DLISWSSMI 131
+ + +K D W S++
Sbjct: 423 MSTMKMKADEAIWGSLL 439
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 223 bits (569), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 126/386 (32%), Positives = 200/386 (51%), Gaps = 5/386 (1%)
Query: 211 LPSAKTAFYQIESPDLV-SWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLC 269
L + +Q+E+ + + +G EA+ + + GL + T+ LL
Sbjct: 60 LAEKRIGRFQVENQRKTEKLDKTLKGLCVTGRLKEAVGL---LWSSGLQVEPETYAVLLQ 116
Query: 270 ACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLV 329
C +G +IH+ + VGF L LL +Y +L A +F ++ K +L+
Sbjct: 117 ECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTAGILFRSL-KIRDLI 175
Query: 330 SWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFS 389
WNA++S +Q E ++ M + P+ T ++ C+ L LE G + H
Sbjct: 176 PWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKRAHAVM 235
Query: 390 VKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEAL 449
+K + ++ V + L+DMY KC S RVFD NVI+W+SLI GY G E L
Sbjct: 236 IKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSEVL 295
Query: 450 NLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDL 509
F KM+ G RPN VT++ VL+AC+H GLV++GW + +M+ + GI P +H++ MVD
Sbjct: 296 KCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWEHFYSMKRDYGIEPEGQHYAAMVDT 355
Query: 510 LARAGCLYEAETFIRKTGFDPDITTWKTLLSSCKTHGNVDIAERAAENILKLDPSNSAAL 569
L RAG L EA F+ K+ W +LL +C+ HGNV + E AA L+LDP+N
Sbjct: 356 LGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGACRIHGNVKLLELAATKFLELDPTNGGNY 415
Query: 570 VLLSSIHASAGNWEDVAKLRKVLDDG 595
V+ ++ +AS G E +K+R+ +++
Sbjct: 416 VVFANGYASCGLREAASKVRRKMENA 441
Score = 145 bits (365), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 87/329 (26%), Positives = 156/329 (47%), Gaps = 7/329 (2%)
Query: 15 FDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTFGSIIKACCIAGDI 74
F + R + G G+ EAV + + SG + T+ +++ C +
Sbjct: 68 FQVENQRKTEKLDKTLKGLCVTGRLKEAVGL---LWSSGLQVEPETYAVLLQECKQRKEY 124
Query: 75 YLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIKDLISWSSMIRGF 134
G+++HA + GF + + L+ +Y G + A +F + I+DLI W++MI G+
Sbjct: 125 TKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTAGILFRSLKIRDLIPWNAMISGY 184
Query: 135 TQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRN 194
Q G E E L+++ DM RQ P+++ SVF ACS+L E+G++ H + K + N
Sbjct: 185 VQKGLEQEGLFIYYDM-RQNRIVPDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSN 243
Query: 195 VFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMH 254
+ +L DMY KC F Q+ + ++++W ++I+ + G +E + F +M
Sbjct: 244 IIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKE 303
Query: 255 IGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVK--VGFNKEVALYNSLLTMYTKCSNL 312
G P+ +TFL +L AC +++G + H Y +K G E Y +++ + L
Sbjct: 304 EGCRPNPVTFLVVLTACNHGGLVDKGWE-HFYSMKRDYGIEPEGQHYAAMVDTLGRAGRL 362
Query: 313 HDALSVFEAISKNANLVSWNAILSACLQH 341
+A + W ++L AC H
Sbjct: 363 QEAYEFVMKSPCKEHPPVWGSLLGACRIH 391
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 86/346 (24%), Positives = 150/346 (43%), Gaps = 45/346 (13%)
Query: 157 QPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKT 216
+P + + + C E G++IH G N + L +YA G L +A
Sbjct: 107 EPETYAV--LLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTAGI 164
Query: 217 AFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMA 276
F ++ DL+ WNA+I+ + G E + I+ M ++PD TF S+ AC++
Sbjct: 165 LFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDR 224
Query: 277 LNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILS 336
L G + H+ ++K + + ++L+ MY KCS+ D VF+ +S N+++W +++S
Sbjct: 225 LEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLS-TRNVITWTSLIS 283
Query: 337 ACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKS--GL 394
H + E + F++M +PN +T +L C ++ G + H +S+K G+
Sbjct: 284 GYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWE-HFYSMKRDYGI 342
Query: 395 VLDVSVSNGLIDMYAKCGSVIHA-QRVFDS--TENPNVISWSSLI--------------- 436
+ ++D + G + A + V S E+P V W SL+
Sbjct: 343 EPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPV--WGSLLGACRIHGNVKLLELA 400
Query: 437 -------------------VGYAMSGLGHEALNLFRKMRNLGVRPN 463
GYA GL A + RKM N GV+ +
Sbjct: 401 ATKFLELDPTNGGNYVVFANGYASCGLREAASKVRRKMENAGVKKD 446
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 90/171 (52%), Gaps = 1/171 (0%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
+Y G ++ A +F ++ +R+++ W +MISGY Q G E + +Y M ++ PDQ T
Sbjct: 152 LYALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYT 211
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMIS 120
F S+ +AC + G++ HA +IK +++ + L+ MY + VF +S
Sbjct: 212 FASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLS 271
Query: 121 IKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACS 171
+++I+W+S+I G+ G E L F M +G +PN V +AC+
Sbjct: 272 TRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGC-RPNPVTFLVVLTACN 321
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 223 bits (568), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 145/499 (29%), Positives = 255/499 (51%), Gaps = 47/499 (9%)
Query: 128 SSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPE--YGRQIHGI 185
S++I+ G I+AL L+ + R+GVY P L + AC+ ++ P G+ +H
Sbjct: 15 SNLIKNHISRGSPIQALVLYGGIRRRGVYFPGWVPL--ILRACACVV-PRVVLGKLLHSE 71
Query: 186 CAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEA 245
KFG+ +V G SL MY KCG + SA+ F ++ ++ +WNA+I + +GDA A
Sbjct: 72 SIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLA 131
Query: 246 ISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFN-KEVALYNSLLT 304
+F + I + +++T++ ++ + + + ++ ++ F K V ++ +L
Sbjct: 132 SGLFEE---ISVCRNTVTWIEMIKGYGKRIEIEKARELFE---RMPFELKNVKAWSVMLG 185
Query: 305 MYTKCSNLHDALSVFEAI-SKNA-----------------------------NLVSWNAI 334
+Y + DA FE I KNA +LV WN +
Sbjct: 186 VYVNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTL 245
Query: 335 LSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGL 394
++ Q+ + + F M +P+ +T++++L CA+ L+VG +VH G+
Sbjct: 246 IAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGI 305
Query: 395 VLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRK 454
L+ VSN LIDMYAKCG + +A VF+S +V +S+I A+ G G EAL +F
Sbjct: 306 ELNQFVSNALIDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFST 365
Query: 455 MRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAG 514
M +L ++P+E+T++ VL+AC H G + EG +++ M+ + + P +HF C++ LL R+G
Sbjct: 366 MESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEMKTQ-DVKPNVKHFGCLIHLLGRSG 424
Query: 515 CLYEAETFIRKTGFDPDITTWKTLLSSCKTHGNVDIAERAAENILKLDP-SNSAA---LV 570
L EA +++ P+ T LL +CK H + ++AE+ + I +NS + L
Sbjct: 425 KLKEAYRLVKEMHVKPNDTVLGALLGACKVHMDTEMAEQVMKIIETAGSITNSYSENHLA 484
Query: 571 LLSSIHASAGNWEDVAKLR 589
+S+++A W+ LR
Sbjct: 485 SISNLYAHTERWQTAEALR 503
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 107/370 (28%), Positives = 175/370 (47%), Gaps = 33/370 (8%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEA------------VVMYIQ 48
MYGKCG + AR+VFD M RNV +W +MI GY NG A V +I+
Sbjct: 90 MYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLASGLFEEISVCRNTVTWIE 149
Query: 49 MLRSGF-----------FPDQLTFG-SIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQ 96
M++ G+ +++ F +KA + +Y+ + K F + +
Sbjct: 150 MIK-GYGKRIEIEKARELFERMPFELKNVKAWSVMLGVYVNNRKMEDARK--FFEDIPEK 206
Query: 97 NGLI-----SMYTNFGQVAHASDVFTMISIKDLISWSSMIRGFTQLGYEIEALYLFRDML 151
N + S Y G V A +F + +DL+ W+++I G+ Q GY +A+ F +M
Sbjct: 207 NAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQ 266
Query: 152 RQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFL 211
+G Y+P+ + S+ SAC+ + GR++H + G+ N F +L DMYAKCG L
Sbjct: 267 GEG-YEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGDL 325
Query: 212 PSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCAC 271
+A + F I + N++I+ A G EA+ +F M + L PD ITF+++L AC
Sbjct: 326 ENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVLTAC 385
Query: 272 TSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSW 331
L +G++I S + V + L+ + + L +A + + + N
Sbjct: 386 VHGGFLMEGLKIFSEMKTQDVKPNVKHFGCLIHLLGRSGKLKEAYRLVKEMHVKPNDTVL 445
Query: 332 NAILSACLQH 341
A+L AC H
Sbjct: 446 GALLGACKVH 455
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 130/476 (27%), Positives = 216/476 (45%), Gaps = 64/476 (13%)
Query: 27 TSMISGYSQNGQGNEAVVMYIQMLRSG-FFPDQLTFGSIIKAC-CIAGDIYLGRQLHAHV 84
+++I + G +A+V+Y + R G +FP + I++AC C+ + LG+ LH+
Sbjct: 15 SNLIKNHISRGSPIQALVLYGGIRRRGVYFPGWVPL--ILRACACVVPRVVLGKLLHSES 72
Query: 85 IKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIKDLISWSSMIRGFTQLGYEIEAL 144
IK G ++ + LISMY G V A VF + +++ +W++MI G+ G + A
Sbjct: 73 IKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLAS 132
Query: 145 YLFR------------DMLR-----------QGVYQPNEFVLGSVFSACSSLLEPEYGRQ 181
LF +M++ + +++ F L +V + L R+
Sbjct: 133 GLFEEISVCRNTVTWIEMIKGYGKRIEIEKARELFERMPFELKNVKAWSVMLGVYVNNRK 192
Query: 182 IHGICAKFGLV--RNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADS 239
+ F + +N F + Y + G + A+ FY++ + DLV WN +IA +A +
Sbjct: 193 MEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQN 252
Query: 240 GDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALY 299
G +++AI F M G PD++T S+L AC L+ G ++HS I G +
Sbjct: 253 GYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVS 312
Query: 300 NSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSEN 359
N+L+ MY KC +L +A SVFE+IS + + N+++S H + E +F M +
Sbjct: 313 NALIDMYAKCGDLENATSVFESISVRS-VACCNSMISCLAIHGKGKEALEMFSTMESLDL 371
Query: 360 KPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQR 419
KP+ IT +L C V G +++ GL K S + Q
Sbjct: 372 KPDEITFIAVLTAC----------------VHGGFLME-----GL-----KIFSEMKTQD 405
Query: 420 VFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACS 475
V PNV + LI SG EA L ++M V+PN+ +L AC
Sbjct: 406 V-----KPNVKHFGCLIHLLGRSGKLKEAYRLVKEMH---VKPNDTVLGALLGACK 453
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 132/294 (44%), Gaps = 43/294 (14%)
Query: 2 YGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTF 61
Y + G + +AR +F + R++V W ++I+GY+QNG ++A+ + M G+ PD +T
Sbjct: 218 YFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTV 277
Query: 62 GSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISI 121
SI+ AC +G + +GR++H+ + G + N LI MY G + +A+ VF IS+
Sbjct: 278 SSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGDLENATSVFESISV 337
Query: 122 KDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQ 181
+ + +SMI G EAL +F M + +P+E +V +AC
Sbjct: 338 RSVACCNSMISCLAIHGKGKEALEMFSTMESLDL-KPDEITFIAVLTAC----------- 385
Query: 182 IHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIES----PDLVSWNAIIAAFA 237
+HG GFL F ++++ P++ + +I
Sbjct: 386 VHG------------------------GFLMEGLKIFSEMKTQDVKPNVKHFGCLIHLLG 421
Query: 238 DSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVG 291
SG EA + ++ MH+ P+ +LL AC M Q+ I G
Sbjct: 422 RSGKLKEAYRLVKE-MHVK--PNDTVLGALLGACKVHMDTEMAEQVMKIIETAG 472
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 223 bits (568), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 131/452 (28%), Positives = 228/452 (50%), Gaps = 1/452 (0%)
Query: 142 EALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFSGCSL 201
EA LF + + ++ ++ AC L ++++G G + +
Sbjct: 105 EAFELFEILEIRCSFKVGVSTYDALVEACIRLKSIRCVKRVYGFMMSNGFEPEQYMMNRI 164
Query: 202 CDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDS 261
M+ KCG + A+ F +I +L S+ +II+ F + G+ EA +F+ M ++
Sbjct: 165 LLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCET 224
Query: 262 ITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEA 321
TF +L A ++ G Q+H +K+G + L+ MY+KC ++ DA FE
Sbjct: 225 HTFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFEC 284
Query: 322 ISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEV 381
+ + V+WN +++ H + E L M S + T++ ++ +LA LE+
Sbjct: 285 MPEKTT-VAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLEL 343
Query: 382 GNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAM 441
Q H +++G ++ + L+D Y+K G V A+ VFD N+ISW++L+ GYA
Sbjct: 344 TKQAHASLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYAN 403
Query: 442 SGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPARE 501
G G +A+ LF KM V PN VT++ VLSAC++ GL E+GW ++ +M E GI P
Sbjct: 404 HGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPRAM 463
Query: 502 HFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTLLSSCKTHGNVDIAERAAENILKL 561
H++CM++LL R G L EA FIR+ + W LL++C+ N+++ AE + +
Sbjct: 464 HYACMIELLGRDGLLDEAIAFIRRAPLKTTVNMWAALLNACRMQENLELGRVVAEKLYGM 523
Query: 562 DPSNSAALVLLSSIHASAGNWEDVAKLRKVLD 593
P V++ +++ S G + A + + L+
Sbjct: 524 GPEKLGNYVVMYNMYNSMGKTAEAAGVLETLE 555
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 113/413 (27%), Positives = 199/413 (48%), Gaps = 27/413 (6%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
M+ KCG + DAR++FD + RN+ S+ S+ISG+ G EA ++ M + T
Sbjct: 167 MHVKCGMIIDARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCETHT 226
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMIS 120
F +++A G IY+G+QLH +K G + GLI MY+ G + A F +
Sbjct: 227 FAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMP 286
Query: 121 IKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGR 180
K ++W+++I G+ GY EAL L DM GV ++F L + + L + E +
Sbjct: 287 EKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGV-SIDQFTLSIMIRISTKLAKLELTK 345
Query: 181 QIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSG 240
Q H + G + + +L D Y+K G + +A+ F ++ +++SWNA++ +A+ G
Sbjct: 346 QAHASLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHG 405
Query: 241 DANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKV-GFNKEVALY 299
+A+ +F +M+ + P+ +TFL++L AC QG +I + +V G Y
Sbjct: 406 RGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPRAMHY 465
Query: 300 NSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLF--- 356
++ + + L +A++ + W A+L+AC + ++ E R+ + L+
Sbjct: 466 ACMIELLGRDGLLDEAIAFIRRAPLKTTVNMWAALLNAC-RMQENLELGRVVAEKLYGMG 524
Query: 357 SENKPNMITITNL---LGTCAELAS------------------LEVGNQVHCF 388
E N + + N+ +G AE A +EVG+Q H F
Sbjct: 525 PEKLGNYVVMYNMYNSMGKTAEAAGVLETLESKGLSMMPACTWVEVGDQTHSF 577
Score = 152 bits (383), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 88/325 (27%), Positives = 158/325 (48%), Gaps = 2/325 (0%)
Query: 50 LRSGFFPDQLTFGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQV 109
+R F T+ ++++AC I ++++ ++ +GF N ++ M+ G +
Sbjct: 115 IRCSFKVGVSTYDALVEACIRLKSIRCVKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMI 174
Query: 110 AHASDVFTMISIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSA 169
A +F I ++L S+ S+I GF G +EA LF+ M+ + + + A
Sbjct: 175 IDARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFELFK-MMWEELSDCETHTFAVMLRA 233
Query: 170 CSSLLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSW 229
+ L G+Q+H K G+V N F C L DMY+KCG + A+ AF + V+W
Sbjct: 234 SAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAW 293
Query: 230 NAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVK 289
N +IA +A G + EA+ + M G+ D T ++ T L Q H+ +++
Sbjct: 294 NNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIR 353
Query: 290 VGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFR 349
GF E+ +L+ Y+K + A VF+ + + N++SWNA++ H + + +
Sbjct: 354 NGFESEIVANTALVDFYSKWGRVDTARYVFDKLPRK-NIISWNALMGGYANHGRGTDAVK 412
Query: 350 LFKQMLFSENKPNMITITNLLGTCA 374
LF++M+ + PN +T +L CA
Sbjct: 413 LFEKMIAANVAPNHVTFLAVLSACA 437
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 219 bits (559), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 135/463 (29%), Positives = 231/463 (49%), Gaps = 46/463 (9%)
Query: 169 ACSSLLEPEYGRQIHGICAKFGLVRNVFSGCS--LCDMYAKCGFLPSAKTAFYQI--ESP 224
A S L P G+++H + GL + S S L YA G + +A+ F +I
Sbjct: 17 AHRSFLRP--GKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPLSEK 74
Query: 225 DLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIH 284
D V W ++++F+ G ++ +F +M + D ++ + L C L Q H
Sbjct: 75 DNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQQGH 134
Query: 285 SYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNA------------------ 326
VK+G V + N+L+ MY KC + + +FE + + +
Sbjct: 135 GVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLE 194
Query: 327 ------------NLVSWNAILSACLQHKQAGETFRLFKQMLFS-ENKPNMITITNLLGTC 373
N V+W +++ L E L +M+F + N +T+ ++L C
Sbjct: 195 RGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSAC 254
Query: 374 AELASLEVGNQVHCFSVKSGLVL-------DVSVSNGLIDMYAKCGSVIHAQRVFDSTEN 426
A+ +L VG VH +++K +++ DV V L+DMYAKCG++ + VF
Sbjct: 255 AQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLMRK 314
Query: 427 PNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNL 486
NV++W++L G AM G G +++F +M V+P+++T+ VLSACSH G+V+EGW
Sbjct: 315 RNVVTWNALFSGLAMHGKGRMVIDMFPQMIR-EVKPDDLTFTAVLSACSHSGIVDEGWRC 373
Query: 487 YNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTLLSSCKTHG 546
++++ G+ P +H++CMVDLL RAG + EAE +R+ P+ +LL SC HG
Sbjct: 374 FHSLRF-YGLEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGSLLGSCSVHG 432
Query: 547 NVDIAERAAENILKLDPSNSAALVLLSSIHASAGNWEDVAKLR 589
V+IAER ++++ P N+ +L+S+++ + G + LR
Sbjct: 433 KVEIAERIKRELIQMSPGNTEYQILMSNMYVAEGRSDIADGLR 475
Score = 139 bits (351), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 113/461 (24%), Positives = 201/461 (43%), Gaps = 80/461 (17%)
Query: 64 IIKACCIAGDIYLGRQLHAHVIKSGF--GGHLVAQNGLISMYTNFGQVAHASDVFTMISI 121
+++ C + G++LHA + SG N L Y + G++ A +F I +
Sbjct: 12 LLRHCAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPL 71
Query: 122 --KDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYG 179
KD + W++++ F++ G + ++ LF +M R+ V + ++ + +F C+ L + +
Sbjct: 72 SEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRV-EIDDVSVVCLFGVCAKLEDLGFA 130
Query: 180 RQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAI------- 232
+Q HG+ K G++ +V +L DMY KCG + K F ++E +VSW +
Sbjct: 131 QQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKW 190
Query: 233 ------------------------IAAFADSGDANEAISIFRQMM-HIGLIPDSITFLSL 267
+A + +G E + + +M+ G + +T S+
Sbjct: 191 EGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSM 250
Query: 268 LCACTSPMALNQGMQIHSYIVKVGF-------NKEVALYNSLLTMYTKCSNLHDALSVFE 320
L AC L G +H Y +K +V + +L+ MY KC N+ +++VF
Sbjct: 251 LSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFR 310
Query: 321 AISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLE 380
+ K N+V+WNA+ S H + +F QM+ E KP+ +T T +L C+
Sbjct: 311 LMRKR-NVVTWNALFSGLAMHGKGRMVIDMFPQMI-REVKPDDLTFTAVLSACSH----- 363
Query: 381 VGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYA 440
+G++D +C H+ R + P V ++ ++
Sbjct: 364 ---------------------SGIVDEGWRC---FHSLRFYGL--EPKVDHYACMVDLLG 397
Query: 441 MSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVE 481
+GL EA L MR + V PNEV +L +CS G VE
Sbjct: 398 RAGLIEEAEIL---MREMPVPPNEVVLGSLLGSCSVHGKVE 435
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 89/394 (22%), Positives = 172/394 (43%), Gaps = 41/394 (10%)
Query: 2 YGKCGSMKDARQVFDAMHL--RNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQL 59
Y G M A+++FD + L ++ V WT+++S +S+ G ++ ++++M R D +
Sbjct: 53 YASSGEMVTAQKLFDEIPLSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDV 112
Query: 60 TFGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMI 119
+ + C D+ +Q H +K G + N L+ MY G V+ +F +
Sbjct: 113 SVVCLFGVCAKLEDLGFAQQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEEL 172
Query: 120 SIKDLIS-------------------------------WSSMIRGFTQLGYEIEALYLFR 148
K ++S W+ M+ G+ G+ E L L
Sbjct: 173 EEKSVVSWTVVLDTVVKWEGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLA 232
Query: 149 DMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLV-------RNVFSGCSL 201
+M+ + + N L S+ SAC+ GR +H K ++ +V G +L
Sbjct: 233 EMVFRCGHGLNFVTLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTAL 292
Query: 202 CDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDS 261
DMYAKCG + S+ F + ++V+WNA+ + A G I +F QM+ + PD
Sbjct: 293 VDMYAKCGNIDSSMNVFRLMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQMIR-EVKPDD 351
Query: 262 ITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEA 321
+TF ++L AC+ +++G + + G +V Y ++ + + + +A +
Sbjct: 352 LTFTAVLSACSHSGIVDEGWRCFHSLRFYGLEPKVDHYACMVDLLGRAGLIEEAEILMRE 411
Query: 322 ISKNANLVSWNAILSACLQHKQAGETFRLFKQML 355
+ N V ++L +C H + R+ ++++
Sbjct: 412 MPVPPNEVVLGSLLGSCSVHGKVEIAERIKRELI 445
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 125/258 (48%), Gaps = 13/258 (5%)
Query: 8 MKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQML-RSGFFPDQLTFGSIIK 66
++ R+VF M RN V+WT M++GY G E + + +M+ R G + +T S++
Sbjct: 193 LERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLS 252
Query: 67 ACCIAGDIYLGRQLHAHVIKSGFG-------GHLVAQNGLISMYTNFGQVAHASDVFTMI 119
AC +G++ +GR +H + +K ++ L+ MY G + + +VF ++
Sbjct: 253 ACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLM 312
Query: 120 SIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACS-SLLEPEY 178
+++++W+++ G G + +F M+R+ +P++ +V SACS S + E
Sbjct: 313 RKRNVVTWNALFSGLAMHGKGRMVIDMFPQMIRE--VKPDDLTFTAVLSACSHSGIVDEG 370
Query: 179 GRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIE-SPDLVSWNAIIAAFA 237
R H + +GL V + D+ + G + A+ ++ P+ V +++ + +
Sbjct: 371 WRCFHSL-RFYGLEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGSLLGSCS 429
Query: 238 DSGDANEAISIFRQMMHI 255
G A I R+++ +
Sbjct: 430 VHGKVEIAERIKRELIQM 447
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 78/172 (45%), Gaps = 38/172 (22%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
MY KCG++ + VF M RNVV+W ++ SG + +G+G + M+ QM+R PD LT
Sbjct: 295 MYAKCGNIDSSMNVFRLMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQMIRE-VKPDDLT 353
Query: 61 FGSIIKACCIAGDIYLG-RQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMI 119
F +++ AC +G + G R H+ + Y +V H
Sbjct: 354 FTAVLSACSHSGIVDEGWRCFHS-----------------LRFYGLEPKVDH-------- 388
Query: 120 SIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACS 171
++ M+ + G EA L R+M PNE VLGS+ +CS
Sbjct: 389 -------YACMVDLLGRAGLIEEAEILMREM----PVPPNEVVLGSLLGSCS 429
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 219 bits (558), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 129/393 (32%), Positives = 216/393 (54%), Gaps = 15/393 (3%)
Query: 209 GFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIP------DSI 262
G L A F I P WNAII FA S + A S +R M+ D++
Sbjct: 51 GDLSFAVQIFRYIPKPLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDAL 110
Query: 263 TFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAI 322
T L AC + + Q+H I + G + + L +LL Y+K +L A +F+ +
Sbjct: 111 TCSFTLKACARALCSSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEM 170
Query: 323 SKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVG 382
++ SWNA+++ + +A E L+K+M + + +T+ LG C+ L ++ G
Sbjct: 171 PVR-DVASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEG 229
Query: 383 NQV-HCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDS-TENPNVISWSSLIVGYA 440
+ H +S +V VSN IDMY+KCG V A +VF+ T +V++W+++I G+A
Sbjct: 230 ENIFHGYSND-----NVIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFA 284
Query: 441 MSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAR 500
+ G H AL +F K+ + G++P++V+Y+ L+AC H GLVE G +++N M + G+
Sbjct: 285 VHGEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHAGLVEYGLSVFNNMACK-GVERNM 343
Query: 501 EHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTLLSSCKTHGNVDIAERAAENILK 560
+H+ C+VDLL+RAG L EA I PD W++LL + + + +V++AE A+ I +
Sbjct: 344 KHYGCVVDLLSRAGRLREAHDIICSMSMIPDPVLWQSLLGASEIYSDVEMAEIASREIKE 403
Query: 561 LDPSNSAALVLLSSIHASAGNWEDVAKLRKVLD 593
+ +N VLLS+++A+ G W+DV ++R ++
Sbjct: 404 MGVNNDGDFVLLSNVYAAQGRWKDVGRVRDDME 436
Score = 115 bits (288), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 93/392 (23%), Positives = 175/392 (44%), Gaps = 14/392 (3%)
Query: 78 RQLHAHVIKSGFGGHLVAQNGLISM--YTNFGQVAHASDVFTMISIKDLISWSSMIRGFT 135
+QL +H + +G ++ L+ + FG ++ A +F I W+++IRGF
Sbjct: 20 KQLQSHFLTAGHFQSSFLRSRLLERCAISPFGDLSFAVQIFRYIPKPLTNDWNAIIRGFA 79
Query: 136 QLGYEIEALYLFRDMLRQ-----GVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFG 190
+ A +R ML+Q + + + AC+ L Q+H + G
Sbjct: 80 GSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKACARALCSSAMDQLHCQINRRG 139
Query: 191 LVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFR 250
L + +L D Y+K G L SA F ++ D+ SWNA+IA A+EA+ +++
Sbjct: 140 LSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEAMELYK 199
Query: 251 QMMHIGLIPDSITFLSLLCACTSPMALNQGMQI-HSYIVKVGFNKEVALYNSLLTMYTKC 309
+M G+ +T ++ L AC+ + +G I H Y N V + N+ + MY+KC
Sbjct: 200 RMETEGIRRSEVTVVAALGACSHLGDVKEGENIFHGYS-----NDNVIVSNAAIDMYSKC 254
Query: 310 SNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNL 369
+ A VFE + ++V+WN +++ H +A +F ++ + KP+ ++
Sbjct: 255 GFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAA 314
Query: 370 LGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTEN-PN 428
L C +E G V G+ ++ ++D+ ++ G + A + S P+
Sbjct: 315 LTACRHAGLVEYGLSVFNNMACKGVERNMKHYGCVVDLLSRAGRLREAHDIICSMSMIPD 374
Query: 429 VISWSSLIVGYAMSGLGHEALNLFRKMRNLGV 460
+ W SL+ + A R+++ +GV
Sbjct: 375 PVLWQSLLGASEIYSDVEMAEIASREIKEMGV 406
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 145/316 (45%), Gaps = 28/316 (8%)
Query: 275 MALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCS-----NLHDALSVFEAISKNANLV 329
++ +Q Q+ S+ + G + L + LL +C+ +L A+ +F I K
Sbjct: 14 VSFSQIKQLQSHFLTAGHFQSSFLRSRLLE---RCAISPFGDLSFAVQIFRYIPKPLT-N 69
Query: 330 SWNAILSACLQHKQAGETFRLFKQMLFSEN------KPNMITITNLLGTCAELASLEVGN 383
WNAI+ F ++ ML + + + +T + L CA +
Sbjct: 70 DWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKACARALCSSAMD 129
Query: 384 QVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSG 443
Q+HC + GL D + L+D Y+K G +I A ++FD +V SW++LI G
Sbjct: 130 QLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGN 189
Query: 444 LGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHF 503
EA+ L+++M G+R +EVT V L ACSH+G V+EG N+++ + I
Sbjct: 190 RASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGENIFHGYSNDNVIVS----- 244
Query: 504 SCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTLLSSCKTHGNVDIAERAAENILKLD- 562
+ +D+ ++ G + +A + + TW T+++ HG A RA E KL+
Sbjct: 245 NAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGE---AHRALEIFDKLED 301
Query: 563 ----PSNSAALVLLSS 574
P + + L L++
Sbjct: 302 NGIKPDDVSYLAALTA 317
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 121/262 (46%), Gaps = 9/262 (3%)
Query: 2 YGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTF 61
Y K G + A ++FD M +R+V SW ++I+G + +EA+ +Y +M G ++T
Sbjct: 154 YSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTV 213
Query: 62 GSIIKACCIAGDIYLGRQLHAHVIKSGFGG-HLVAQNGLISMYTNFGQVAHASDVFTMIS 120
+ + AC GD+ G I G+ +++ N I MY+ G V A VF +
Sbjct: 214 VAALGACSHLGDVKEGEN-----IFHGYSNDNVIVSNAAIDMYSKCGFVDKAYQVFEQFT 268
Query: 121 -IKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYG 179
K +++W++MI GF G AL +F D L +P++ + +AC EYG
Sbjct: 269 GKKSVVTWNTMITGFAVHGEAHRALEIF-DKLEDNGIKPDDVSYLAALTACRHAGLVEYG 327
Query: 180 RQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIES-PDLVSWNAIIAAFAD 238
+ A G+ RN+ + D+ ++ G L A + PD V W +++ A
Sbjct: 328 LSVFNNMACKGVERNMKHYGCVVDLLSRAGRLREAHDIICSMSMIPDPVLWQSLLGASEI 387
Query: 239 SGDANEAISIFRQMMHIGLIPD 260
D A R++ +G+ D
Sbjct: 388 YSDVEMAEIASREIKEMGVNND 409
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 96/173 (55%), Gaps = 5/173 (2%)
Query: 1 MYGKCGSMKDARQVFDAMH-LRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQL 59
MY KCG + A QVF+ ++VV+W +MI+G++ +G+ + A+ ++ ++ +G PD +
Sbjct: 250 MYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDV 309
Query: 60 TFGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVF-TM 118
++ + + AC AG + G + ++ G ++ ++ + + G++ A D+ +M
Sbjct: 310 SYLAALTACRHAGLVEYGLSVFNNMACKGVERNMKHYGCVVDLLSRAGRLREAHDIICSM 369
Query: 119 ISIKDLISWSSMIRGFTQLGYEIE-ALYLFRDMLRQGVYQPNEFV-LGSVFSA 169
I D + W S++ G +++ ++E A R++ GV +FV L +V++A
Sbjct: 370 SMIPDPVLWQSLL-GASEIYSDVEMAEIASREIKEMGVNNDGDFVLLSNVYAA 421
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 219 bits (558), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 141/431 (32%), Positives = 221/431 (51%), Gaps = 21/431 (4%)
Query: 180 RQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPS-------AKTAFYQIESPDLVSWNAI 232
+ H + GL RN ++ L + LP+ A + F IE P+ ++ +
Sbjct: 28 KSTHSLFIIHGLHRNTYAISKLLTAFLH---LPNLNKHFHYASSIFDSIEIPNSFVYDTM 84
Query: 233 IAAFADSGDANEAISIFRQMM---HIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVK 289
I + S + + F M+ + P +TF L+ AC + G QIH ++VK
Sbjct: 85 IRICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIVACLKACFFSVGKQIHCWVVK 144
Query: 290 VG-FNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETF 348
G F + + +L +Y + L DA VF+ I + ++V W+ +++ ++ E
Sbjct: 145 NGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQ-PDVVKWDVLMNGYVRCGLGSEGL 203
Query: 349 RLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVL-DVSVSNGLIDM 407
+FK+ML +P+ ++T L CA++ +L G +H F K + DV V L+DM
Sbjct: 204 EVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDM 263
Query: 408 YAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALN-LFRKMRNLGVRPNEVT 466
YAKCG + A VF+ NV SW++LI GYA G +A L R R G++P+ V
Sbjct: 264 YAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVV 323
Query: 467 YVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKT 526
+GVL+AC+H G +EEG + ME GI P EH+SC+VDL+ RAG L +A I K
Sbjct: 324 LLGVLAACAHGGFLEEGRTMLENMEARYGITPKHEHYSCIVDLMCRAGRLDDALDLIEKM 383
Query: 527 GFDPDITTWKTLLSSCKTHGNVDIAERAAENILKLDPSN----SAALVLLSSIHASAGNW 582
P + W LL+ C+TH NV++ E A +N+L L+ N AALV LS+I+ S
Sbjct: 384 PMKPLASVWGALLNGCRTHKNVELGELAVQNLLDLEKGNVEEEEAALVQLSNIYFSVQRN 443
Query: 583 EDVAKLRKVLD 593
+ K+R +++
Sbjct: 444 PEAFKVRGMIE 454
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 102/362 (28%), Positives = 177/362 (48%), Gaps = 13/362 (3%)
Query: 11 ARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRS---GFFPDQLTFGSIIKA 67
A +FD++ + N + +MI S++ Q + + ++ M++ P LTF +I A
Sbjct: 66 ASSIFDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIVA 125
Query: 68 CCIAGDIYLGRQLHAHVIKSGF---GGHLVAQNGLISMYTNFGQVAHASDVFTMISIKDL 124
C A +G+Q+H V+K+G GH+ Q G++ +Y + A VF I D+
Sbjct: 126 CLKACFFSVGKQIHCWVVKNGVFLSDGHV--QTGVLRIYVEDKLLFDARKVFDEIPQPDV 183
Query: 125 ISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHG 184
+ W ++ G+ + G E L +F++ML +G+ +P+EF + + +AC+ + G+ IH
Sbjct: 184 VKWDVLMNGYVRCGLGSEGLEVFKEMLVRGI-EPDEFSVTTALTACAQVGALAQGKWIHE 242
Query: 185 ICAKFGLVR-NVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDAN 243
K + +VF G +L DMYAKCG + +A F ++ ++ SW A+I +A G A
Sbjct: 243 FVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAK 302
Query: 244 EAISIF-RQMMHIGLIPDSITFLSLLCACTSPMALNQG-MQIHSYIVKVGFNKEVALYNS 301
+A + R G+ PDS+ L +L AC L +G + + + G + Y+
Sbjct: 303 KATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEARYGITPKHEHYSC 362
Query: 302 LLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKP 361
++ + + L DAL + E + W A+L+ C HK E L Q L K
Sbjct: 363 IVDLMCRAGRLDDALDLIEKMPMKPLASVWGALLNGCRTHKNV-ELGELAVQNLLDLEKG 421
Query: 362 NM 363
N+
Sbjct: 422 NV 423
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/323 (26%), Positives = 156/323 (48%), Gaps = 12/323 (3%)
Query: 266 SLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNL----HDALSVFEA 321
SL+ A + Q HS + G ++ + LLT + NL H A S+F++
Sbjct: 13 SLILASQRCNTVKQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDS 72
Query: 322 ISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENK---PNMITITNLLGTCAELAS 378
I + V ++ ++ C + Q R F M+ E + P+ +T L+ C +
Sbjct: 73 IEIPNSFV-YDTMIRICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIVACLKACF 131
Query: 379 LEVGNQVHCFSVKSGLVL-DVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIV 437
VG Q+HC+ VK+G+ L D V G++ +Y + + A++VFD P+V+ W L+
Sbjct: 132 FSVGKQIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQPDVVKWDVLMN 191
Query: 438 GYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIP 497
GY GLG E L +F++M G+ P+E + L+AC+ +G + +G ++ ++++ I
Sbjct: 192 GYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIE 251
Query: 498 PAREHFSCMVDLLARAGCLYEA-ETFIRKTGFDPDITTWKTLLSSCKTHGNVDIAERAAE 556
+ +VD+ A+ GC+ A E F + T ++ +W L+ +G A +
Sbjct: 252 SDVFVGTALVDMYAKCGCIETAVEVFEKLT--RRNVFSWAALIGGYAAYGYAKKATTCLD 309
Query: 557 NILKLDPSNSAALVLLSSIHASA 579
I + D ++VLL + A A
Sbjct: 310 RIEREDGIKPDSVVLLGVLAACA 332
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 112/227 (49%), Gaps = 3/227 (1%)
Query: 10 DARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTFGSIIKACC 69
DAR+VFD + +VV W +++GY + G G+E + ++ +ML G PD+ + + + AC
Sbjct: 170 DARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACA 229
Query: 70 IAGDIYLGRQLHAHVIKSGF-GGHLVAQNGLISMYTNFGQVAHASDVFTMISIKDLISWS 128
G + G+ +H V K + + L+ MY G + A +VF ++ +++ SW+
Sbjct: 230 QVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWA 289
Query: 129 SMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGR-QIHGICA 187
++I G+ GY +A + R+ +P+ VL V +AC+ E GR + + A
Sbjct: 290 ALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEA 349
Query: 188 KFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVS-WNAII 233
++G+ + D+ + G L A ++ L S W A++
Sbjct: 350 RYGITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGALL 396
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 67/136 (49%), Gaps = 3/136 (2%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRS-GFFPDQL 59
MY KCG ++ A +VF+ + RNV SW ++I GY+ G +A ++ R G PD +
Sbjct: 263 MYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDSV 322
Query: 60 TFGSIIKACCIAGDIYLGRQLHAHV-IKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTM 118
++ AC G + GR + ++ + G + ++ + G++ A D+
Sbjct: 323 VLLGVLAACAHGGFLEEGRTMLENMEARYGITPKHEHYSCIVDLMCRAGRLDDALDLIEK 382
Query: 119 ISIKDLIS-WSSMIRG 133
+ +K L S W +++ G
Sbjct: 383 MPMKPLASVWGALLNG 398
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 218 bits (556), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 128/387 (33%), Positives = 215/387 (55%), Gaps = 5/387 (1%)
Query: 209 GFLPSAKTAFYQIES-PDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLI-PDSITFLS 266
G L A+ F +S P WN +I F++S +I + +M+ + PD TF
Sbjct: 53 GSLSHAQLLFDHFDSDPSTSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNF 112
Query: 267 LLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNA 326
L +C ++ + ++IH +++ GF + + SL+ Y+ ++ A VF+ +
Sbjct: 113 ALKSCERIKSIPKCLEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVR- 171
Query: 327 NLVSWNAILSACLQH-KQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQV 385
+LVSWN ++ C H + ++K+M + T+ LL +CA +++L +G +
Sbjct: 172 DLVSWNVMI-CCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVML 230
Query: 386 HCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLG 445
H + V VSN LIDMYAKCGS+ +A VF+ +V++W+S+I+GY + G G
Sbjct: 231 HRIACDIRCESCVFVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHG 290
Query: 446 HEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSC 505
EA++ FRKM GVRPN +T++G+L CSH GLV+EG + M + + P +H+ C
Sbjct: 291 VEAISFFRKMVASGVRPNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGC 350
Query: 506 MVDLLARAGCLYEAETFIRKTGFDPDITTWKTLLSSCKTHGNVDIAERAAENILKLDPSN 565
MVDL RAG L + I + D W+TLL SCK H N+++ E A + +++L+ N
Sbjct: 351 MVDLYGRAGQLENSLEMIYASSCHEDPVLWRTLLGSCKIHRNLELGEVAMKKLVQLEAFN 410
Query: 566 SAALVLLSSIHASAGNWEDVAKLRKVL 592
+ VL++SI+++A + + A +RK++
Sbjct: 411 AGDYVLMTSIYSAANDAQAFASMRKLI 437
Score = 163 bits (412), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 123/437 (28%), Positives = 211/437 (48%), Gaps = 35/437 (8%)
Query: 6 GSMKDARQVFDAMHLRNVVS-WTSMISGYSQNGQGNEAVVMYIQMLRSGF-FPDQLTFGS 63
GS+ A+ +FD S W +I G+S + +++ Y +ML S PD TF
Sbjct: 53 GSLSHAQLLFDHFDSDPSTSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNF 112
Query: 64 IIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIKD 123
+K+C I ++H VI+SGF + L+ Y+ G V AS VF + ++D
Sbjct: 113 ALKSCERIKSIPKCLEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRD 172
Query: 124 LISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIH 183
L+SW+ MI F+ +G +AL +++ M +GV + + L ++ S+C+ + G +H
Sbjct: 173 LVSWNVMICCFSHVGLHNQALSMYKRMGNEGVC-GDSYTLVALLSSCAHVSALNMGVMLH 231
Query: 184 GICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDAN 243
I VF +L DMYAKCG L +A F + D+++WN++I + G
Sbjct: 232 RIACDIRCESCVFVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGV 291
Query: 244 EAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFN--KEVALYNS 301
EAIS FR+M+ G+ P++ITFL LL C+ + +G++ H I+ F+ V Y
Sbjct: 292 EAISFFRKMVASGVRPNAITFLGLLLGCSHQGLVKEGVE-HFEIMSSQFHLTPNVKHYGC 350
Query: 302 LLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHK--QAGETFRLFKQMLFSEN 359
++ +Y + L ++L + A S + + V W +L +C H+ + GE L + N
Sbjct: 351 MVDLYGRAGQLENSLEMIYASSCHEDPVLWRTLLGSCKIHRNLELGEVAMKKLVQLEAFN 410
Query: 360 KPNMITITNL---------------------LGTCAELASLEVGNQVHCFSVKSGLVLDV 398
+ + +T++ L T + +E+G+QVH F V + +
Sbjct: 411 AGDYVLMTSIYSAANDAQAFASMRKLIRSHDLQTVPGWSWIEIGDQVHKFVVDDKMHPES 470
Query: 399 SVSNGLIDMYAKCGSVI 415
+V +Y++ G VI
Sbjct: 471 AV------IYSELGEVI 481
Score = 148 bits (374), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 96/364 (26%), Positives = 179/364 (49%), Gaps = 6/364 (1%)
Query: 78 RQLHAHVIKSGFGGHLVAQNGLISM--YTNFGQVAHASDVFTMISIKDLIS-WSSMIRGF 134
R++H+HVI +G H N L+ + G ++HA +F S W+ +IRGF
Sbjct: 22 RKIHSHVIINGLQHHPSIFNHLLRFCAVSVTGSLSHAQLLFDHFDSDPSTSDWNYLIRGF 81
Query: 135 TQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRN 194
+ + ++ + ML V +P+ F +C + +IHG + G + +
Sbjct: 82 SNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIPKCLEIHGSVIRSGFLDD 141
Query: 195 VFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMH 254
SL Y+ G + A F ++ DLVSWN +I F+ G N+A+S++++M +
Sbjct: 142 AIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQALSMYKRMGN 201
Query: 255 IGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHD 314
G+ DS T ++LL +C ALN G+ +H + V + N+L+ MY KC +L +
Sbjct: 202 EGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNALIDMYAKCGSLEN 261
Query: 315 ALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCA 374
A+ VF + K ++++WN+++ H E F++M+ S +PN IT LL C+
Sbjct: 262 AIGVFNGMRKR-DVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAITFLGLLLGCS 320
Query: 375 ELASLEVG-NQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHA-QRVFDSTENPNVISW 432
++ G S + L +V ++D+Y + G + ++ + ++ S+ + + + W
Sbjct: 321 HQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEMIYASSCHEDPVLW 380
Query: 433 SSLI 436
+L+
Sbjct: 381 RTLL 384
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 112/236 (47%), Gaps = 3/236 (1%)
Query: 2 YGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTF 61
Y GS++ A +VFD M +R++VSW MI +S G N+A+ MY +M G D T
Sbjct: 152 YSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQALSMYKRMGNEGVCGDSYTL 211
Query: 62 GSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISI 121
+++ +C + +G LH + N LI MY G + +A VF +
Sbjct: 212 VALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNALIDMYAKCGSLENAIGVFNGMRK 271
Query: 122 KDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSL-LEPEYGR 180
+D+++W+SMI G+ G+ +EA+ FR M+ GV +PN + CS L E
Sbjct: 272 RDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGV-RPNAITFLGLLLGCSHQGLVKEGVE 330
Query: 181 QIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIE-SPDLVSWNAIIAA 235
+ ++F L NV + D+Y + G L ++ Y D V W ++ +
Sbjct: 331 HFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEMIYASSCHEDPVLWRTLLGS 386
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 96/176 (54%), Gaps = 11/176 (6%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
MY KCGS+++A VF+ M R+V++W SMI GY +G G EA+ + +M+ SG P+ +T
Sbjct: 252 MYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAIT 311
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHL---VAQNG-LISMYTNFGQVAHASDVF 116
F ++ C G + G + H ++ S F HL V G ++ +Y GQ+ ++ ++
Sbjct: 312 FLGLLLGCSHQGLVKEGVE-HFEIMSSQF--HLTPNVKHYGCMVDLYGRAGQLENSLEMI 368
Query: 117 TMISI-KDLISWSSMIRGFTQLGYEIE-ALYLFRDMLRQGVYQPNEFVL-GSVFSA 169
S +D + W +++ G ++ +E + +++ + ++VL S++SA
Sbjct: 369 YASSCHEDPVLWRTLL-GSCKIHRNLELGEVAMKKLVQLEAFNAGDYVLMTSIYSA 423
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 218 bits (555), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 132/423 (31%), Positives = 223/423 (52%), Gaps = 39/423 (9%)
Query: 210 FLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLC 269
+ +A F +I D++S A+I F EA F++++ +G+ P+ TF +++
Sbjct: 42 LIRNAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTFGTVIG 101
Query: 270 ACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLV 329
+ T+ + G Q+H Y +K+G V + +++L Y K S L DA F+ +++ N+V
Sbjct: 102 SSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDD-TRDPNVV 160
Query: 330 SWNAILSACLQHKQAGETFRLFKQML-------------FSENK---------------- 360
S ++S L+ + E LF+ M FS+
Sbjct: 161 SITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREG 220
Query: 361 ---PNMITITNLLGTCAELASLEVGNQVHCFSVKS-GLVLDVSVSNGLIDMYAKCGSVIH 416
PN T + + +AS G +H ++K G +V V N LI Y+KCG++
Sbjct: 221 VVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMED 280
Query: 417 AQRVFDS--TENPNVISWSSLIVGYAMSGLGHEALNLFRKM-RNLGVRPNEVTYVGVLSA 473
+ F+ E N++SW+S+I GYA +G G EA+ +F KM ++ +RPN VT +GVL A
Sbjct: 281 SLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFA 340
Query: 474 CSHIGLVEEGWNLYNTMEEELGIPP--AREHFSCMVDLLARAGCLYEAETFIRKTGFDPD 531
C+H GL++EG+ +N + P EH++CMVD+L+R+G EAE I+ DP
Sbjct: 341 CNHAGLIQEGYMYFNKAVNDYDDPNLLELEHYACMVDMLSRSGRFKEAEELIKSMPLDPG 400
Query: 532 ITTWKTLLSSCKTHGNVDIAERAAENILKLDPSNSAALVLLSSIHASAGNWEDVAKLRKV 591
I WK LL C+ H N +A+ AA IL+LDP + ++ V+LS+ +++ NW++V+ +R+
Sbjct: 401 IGFWKALLGGCQIHSNKRLAKLAASKILELDPRDVSSYVMLSNAYSAMENWQNVSLIRRK 460
Query: 592 LDD 594
+ +
Sbjct: 461 MKE 463
Score = 152 bits (383), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 100/372 (26%), Positives = 182/372 (48%), Gaps = 38/372 (10%)
Query: 8 MKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTFGSIIKA 67
+++A +VFD + +V+S T++I + + + EA + ++L G P++ TFG++I +
Sbjct: 43 IRNAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTFGTVIGS 102
Query: 68 CCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVF------TMISI 121
+ D+ LG+QLH + +K G ++ + +++ Y + A F ++SI
Sbjct: 103 STTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSI 162
Query: 122 KDLIS-------------------------WSSMIRGFTQLGYEIEALYLFRDMLRQGVY 156
+LIS W+++I GF+Q G EA+ F DMLR+GV
Sbjct: 163 TNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVV 222
Query: 157 QPNEFVLGSVFSACSSLLEPEYGRQIHGICAKF-GLVRNVFSGCSLCDMYAKCGFLPSAK 215
PNE +A S++ G+ IH KF G NVF SL Y+KCG + +
Sbjct: 223 IPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSL 282
Query: 216 TAFYQIESP--DLVSWNAIIAAFADSGDANEAISIFRQMMH-IGLIPDSITFLSLLCACT 272
AF ++E ++VSWN++I +A +G EA+++F +M+ L P+++T L +L AC
Sbjct: 283 LAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFACN 342
Query: 273 SPMALNQGMQIHSYIVKVGFNK---EVALYNSLLTMYTKCSNLHDALSVFEAISKNANLV 329
+ +G + V + E+ Y ++ M ++ +A + +++ + +
Sbjct: 343 HAGLIQEGYMYFNKAVNDYDDPNLLELEHYACMVDMLSRSGRFKEAEELIKSMPLDPGIG 402
Query: 330 SWNAILSACLQH 341
W A+L C H
Sbjct: 403 FWKALLGGCQIH 414
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 90/174 (51%), Gaps = 4/174 (2%)
Query: 2 YGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSG-FFPDQLT 60
Y K ++A +F AM R+VV+W ++I G+SQ G+ EAV ++ MLR G P++ T
Sbjct: 169 YLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIPNEST 228
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKS-GFGGHLVAQNGLISMYTNFGQVAHASDVFTMI 119
F I A G+ +HA IK G ++ N LIS Y+ G + + F +
Sbjct: 229 FPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSLLAFNKL 288
Query: 120 --SIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACS 171
++++SW+SMI G+ G EA+ +F M++ +PN + V AC+
Sbjct: 289 EEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFACN 342
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 218 bits (554), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 137/428 (32%), Positives = 221/428 (51%), Gaps = 15/428 (3%)
Query: 180 RQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPS----AKTAFYQIESPDLVSWNAIIAA 235
+ H + GL RN ++ L + L A + F IE P+ ++ +I
Sbjct: 28 KSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPNSFVYDTMIRI 87
Query: 236 FADSGDANEAISIFRQMM---HIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVG- 291
+ S + + F M+ + P +TF L+ AC + G QIH ++VK G
Sbjct: 88 CSRSSQPHLGLRYFLLMVKEEEEDIAPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGV 147
Query: 292 FNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLF 351
F + + +L +Y + L DA VF+ I + ++V W+ +++ ++ E +F
Sbjct: 148 FLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQ-PDVVKWDVLMNGYVRCGLGSEGLEVF 206
Query: 352 KQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCF-SVKSGLVLDVSVSNGLIDMYAK 410
++ML +P+ ++T L CA++ +L G +H F KS + DV V L+DMYAK
Sbjct: 207 REMLVKGLEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAK 266
Query: 411 CGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKM-RNLGVRPNEVTYVG 469
CG + A VF NV SW++LI GYA G +A+ ++ R G++P+ V +G
Sbjct: 267 CGCIETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLG 326
Query: 470 VLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFD 529
VL+AC+H G +EEG ++ ME I P EH+SC+VDL+ RAG L +A I K
Sbjct: 327 VLAACAHGGFLEEGRSMLENMEARYEITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMK 386
Query: 530 PDITTWKTLLSSCKTHGNVDIAERAAENILKLDPSN----SAALVLLSSIHASAGNWEDV 585
P + W LL+ C+TH NV++ E A +N+L L+ N AALV LS+I+ S +
Sbjct: 387 PLASVWGALLNGCRTHKNVELGELAVKNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEA 446
Query: 586 AKLRKVLD 593
+K+R +++
Sbjct: 447 SKVRGMIE 454
Score = 149 bits (376), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 94/339 (27%), Positives = 170/339 (50%), Gaps = 8/339 (2%)
Query: 11 ARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRS---GFFPDQLTFGSIIKA 67
A +FD++ + N + +MI S++ Q + + ++ M++ P LTF +I A
Sbjct: 66 ASSIFDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDIAPSYLTFHFLIVA 125
Query: 68 CCIAGDIYLGRQLHAHVIKSG-FGGHLVAQNGLISMYTNFGQVAHASDVFTMISIKDLIS 126
C A +G+Q+H V+K+G F Q G++ +Y + A VF I D++
Sbjct: 126 CLKACFFSVGKQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQPDVVK 185
Query: 127 WSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGIC 186
W ++ G+ + G E L +FR+ML +G+ +P+EF + + +AC+ + G+ IH
Sbjct: 186 WDVLMNGYVRCGLGSEGLEVFREMLVKGL-EPDEFSVTTALTACAQVGALAQGKWIHEFV 244
Query: 187 AKFGLVR-NVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEA 245
K + +VF G +L DMYAKCG + +A F ++ ++ SW A+I +A G A +A
Sbjct: 245 KKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKA 304
Query: 246 ISIFRQM-MHIGLIPDSITFLSLLCACTSPMALNQGMQ-IHSYIVKVGFNKEVALYNSLL 303
++ ++ G+ PDS+ L +L AC L +G + + + + Y+ ++
Sbjct: 305 MTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEARYEITPKHEHYSCIV 364
Query: 304 TMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHK 342
+ + L DAL++ E + W A+L+ C HK
Sbjct: 365 DLMCRAGRLDDALNLIEKMPMKPLASVWGALLNGCRTHK 403
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 157/323 (48%), Gaps = 12/323 (3%)
Query: 266 SLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNL----HDALSVFEA 321
SL+ A + Q HS + G ++ + LLT + NL H A S+F++
Sbjct: 13 SLILASQRCNTVKQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDS 72
Query: 322 ISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENK---PNMITITNLLGTCAELAS 378
I + V ++ ++ C + Q R F M+ E + P+ +T L+ C +
Sbjct: 73 IEIPNSFV-YDTMIRICSRSSQPHLGLRYFLLMVKEEEEDIAPSYLTFHFLIVACLKACF 131
Query: 379 LEVGNQVHCFSVKSGLVL-DVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIV 437
VG Q+HC+ VK+G+ L D V G++ +Y + ++ A++VFD P+V+ W L+
Sbjct: 132 FSVGKQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQPDVVKWDVLMN 191
Query: 438 GYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIP 497
GY GLG E L +FR+M G+ P+E + L+AC+ +G + +G ++ ++++ I
Sbjct: 192 GYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKSWIE 251
Query: 498 PAREHFSCMVDLLARAGCLYEA-ETFIRKTGFDPDITTWKTLLSSCKTHGNVDIAERAAE 556
+ +VD+ A+ GC+ A E F + T ++ +W L+ +G A E
Sbjct: 252 SDVFVGTALVDMYAKCGCIETAVEVFKKLT--RRNVFSWAALIGGYAAYGYAKKAMTCLE 309
Query: 557 NILKLDPSNSAALVLLSSIHASA 579
+ + D ++VLL + A A
Sbjct: 310 RLEREDGIKPDSVVLLGVLAACA 332
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 112/227 (49%), Gaps = 3/227 (1%)
Query: 10 DARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTFGSIIKACC 69
DAR+VFD + +VV W +++GY + G G+E + ++ +ML G PD+ + + + AC
Sbjct: 170 DARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACA 229
Query: 70 IAGDIYLGRQLHAHV-IKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIKDLISWS 128
G + G+ +H V KS + L+ MY G + A +VF ++ +++ SW+
Sbjct: 230 QVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWA 289
Query: 129 SMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQ-IHGICA 187
++I G+ GY +A+ + R+ +P+ VL V +AC+ E GR + + A
Sbjct: 290 ALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEA 349
Query: 188 KFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVS-WNAII 233
++ + + D+ + G L A ++ L S W A++
Sbjct: 350 RYEITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGALL 396
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRS-GFFPDQL 59
MY KCG ++ A +VF + RNV SW ++I GY+ G +A+ ++ R G PD +
Sbjct: 263 MYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKAMTCLERLEREDGIKPDSV 322
Query: 60 TFGSIIKACCIAGDIYLGRQL 80
++ AC G + GR +
Sbjct: 323 VLLGVLAACAHGGFLEEGRSM 343
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 217 bits (553), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 120/408 (29%), Positives = 217/408 (53%), Gaps = 36/408 (8%)
Query: 220 QIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQ 279
++ P WN +I F++S + ++IS++ QM+ GL+PD +T+ L+ + +
Sbjct: 67 KLSDPPNYGWNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKL 126
Query: 280 GMQIHSYIVKVGF-------------------------------NKEVALYNSLLTMYTK 308
G +H +VK G +K + +NS+L Y K
Sbjct: 127 GGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAK 186
Query: 309 CSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQML-FSENKPNMITIT 367
++ A VF+ +S+ ++V+W++++ ++ + + +F QM+ +K N +T+
Sbjct: 187 SGDVVSARLVFDEMSER-DVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMV 245
Query: 368 NLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVF--DSTE 425
+++ CA L +L G VH + + L L V + LIDMYAKCGS+ A VF S +
Sbjct: 246 SVICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVK 305
Query: 426 NPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWN 485
+ + W+++I G A G E+L LF KMR + P+E+T++ +L+ACSH GLV+E W+
Sbjct: 306 ETDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWH 365
Query: 486 LYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTLLSSCKTH 545
+ +++E G P EH++CMVD+L+RAG + +A FI + P + LL+ C H
Sbjct: 366 FFKSLKES-GAEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGSMLGALLNGCINH 424
Query: 546 GNVDIAERAAENILKLDPSNSAALVLLSSIHASAGNWEDVAKLRKVLD 593
GN+++AE + +++L P N V L++++A + +R+ ++
Sbjct: 425 GNLELAETVGKKLIELQPHNDGRYVGLANVYAINKQFRAARSMREAME 472
Score = 159 bits (402), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 102/349 (29%), Positives = 159/349 (45%), Gaps = 33/349 (9%)
Query: 26 WTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTFGSIIKACCIAGDIYLGRQLHAHVI 85
W +I G+S + +++ +YIQMLR G PD +T+ ++K+ + LG LH V+
Sbjct: 76 WNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVV 135
Query: 86 KSGFGGHLVAQNGLISMYTNF-------------------------------GQVAHASD 114
KSG L N LI MY +F G V A
Sbjct: 136 KSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARL 195
Query: 115 VFTMISIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLL 174
VF +S +D+++WSSMI G+ + G +AL +F M+R G + NE + SV AC+ L
Sbjct: 196 VFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLG 255
Query: 175 EPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQ--IESPDLVSWNAI 232
G+ +H L V SL DMYAKCG + A + FY+ ++ D + WNAI
Sbjct: 256 ALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAI 315
Query: 233 IAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGF 292
I A G E++ +F +M + PD ITFL LL AC+ + + + + G
Sbjct: 316 IGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSLKESGA 375
Query: 293 NKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQH 341
+ Y ++ + ++ + DA + A+L+ C+ H
Sbjct: 376 EPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGSMLGALLNGCINH 424
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 102/362 (28%), Positives = 169/362 (46%), Gaps = 43/362 (11%)
Query: 49 MLRSGFFPDQLTFGSIIKACCIA-GDIYLGRQLHAHVIKSGFGGH--LVAQNGLISMYTN 105
ML+S L SI++ C + ++Y ++H +I G V+Q S ++
Sbjct: 1 MLKSS---SSLVAKSILRHQCKSMSELY---KIHTLLITLGLSEEEPFVSQTLSFSALSS 54
Query: 106 FGQVAHASDVFTMISIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGS 165
G V +A + +S W+ +IRGF+ +++ ++ MLR G+ P+
Sbjct: 55 SGDVDYAYKFLSKLSDPPNYGWNFVIRGFSNSRNPEKSISVYIQMLRFGLL-PDHMTYPF 113
Query: 166 VFSACSSLLEPEYGRQIHGICAKFGLV-------------------------------RN 194
+ + S L + G +H K GL +N
Sbjct: 114 LMKSSSRLSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKN 173
Query: 195 VFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMH 254
+ + S+ D YAK G + SA+ F ++ D+V+W+++I + G+ N+A+ IF QMM
Sbjct: 174 LVTWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMR 233
Query: 255 IGLIP-DSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLH 313
+G + +T +S++CAC ALN+G +H YI+ V V L SL+ MY KC ++
Sbjct: 234 MGSSKANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIG 293
Query: 314 DALSVF-EAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGT 372
DA SVF A K + + WNAI+ H E+ +LF +M S+ P+ IT LL
Sbjct: 294 DAWSVFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAA 353
Query: 373 CA 374
C+
Sbjct: 354 CS 355
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 82/338 (24%), Positives = 165/338 (48%), Gaps = 43/338 (12%)
Query: 276 ALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVS--WNA 333
++++ +IH+ ++ +G ++E + L+ ++ S+ D ++ +SK ++ + WN
Sbjct: 20 SMSELYKIHTLLITLGLSEEEPFVSQTLS-FSALSSSGDVDYAYKFLSKLSDPPNYGWNF 78
Query: 334 ILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSG 393
++ + ++ ++ QML P+ +T L+ + + L++ ++G +HC VKSG
Sbjct: 79 VIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVVKSG 138
Query: 394 LVLDVSVSNGLI-------------------------------DMYAKCGSVIHAQRVFD 422
L D+ + N LI D YAK G V+ A+ VFD
Sbjct: 139 LEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFD 198
Query: 423 STENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLG-VRPNEVTYVGVLSACSHIGLVE 481
+V++WSS+I GY G ++AL +F +M +G + NEVT V V+ AC+H+G +
Sbjct: 199 EMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALN 258
Query: 482 EGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEA-ETFIRKTGFDPDITTWKTLLS 540
G ++ + ++ +P + ++D+ A+ G + +A F R + + D W ++
Sbjct: 259 RGKTVHRYI-LDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIG 317
Query: 541 SCKTHG----NVDIAERAAENILKLDPSNSAALVLLSS 574
+HG ++ + + E+ K+DP L LL++
Sbjct: 318 GLASHGFIRESLQLFHKMRES--KIDPDEITFLCLLAA 353
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 95/173 (54%), Gaps = 4/173 (2%)
Query: 2 YGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFP-DQLT 60
Y K G + AR VFD M R+VV+W+SMI GY + G+ N+A+ ++ QM+R G +++T
Sbjct: 184 YAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVT 243
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMIS 120
S+I AC G + G+ +H +++ ++ Q LI MY G + A VF S
Sbjct: 244 MVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRAS 303
Query: 121 IK--DLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACS 171
+K D + W+++I G G+ E+L LF M R+ P+E + +ACS
Sbjct: 304 VKETDALMWNAIIGGLASHGFIRESLQLFHKM-RESKIDPDEITFLCLLAACS 355
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 216 bits (550), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 119/398 (29%), Positives = 212/398 (53%), Gaps = 35/398 (8%)
Query: 226 LVSWNAIIAAFADSGDANEAISIFRQMMHIGLIP-DSITFLSLLCACTSPMALNQGMQIH 284
L+S ++++A+ G+ +A+++F QM +P D+ F L +C + G +H
Sbjct: 12 LISLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVH 71
Query: 285 SYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSA---CLQH 341
++ VK F + +LL MY KC ++ A +F+ I + N V WNA++S C +
Sbjct: 72 AHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQR-NAVVWNAMISHYTHCGKV 130
Query: 342 KQAGETFR------------------------------LFKQMLFSENKPNMITITNLLG 371
K+A E + +++M+ KPN+IT+ L+
Sbjct: 131 KEAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVS 190
Query: 372 TCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVIS 431
C+ + + + ++H ++ ++ + + +GL++ Y +CGS+++ Q VFDS E+ +V++
Sbjct: 191 ACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVA 250
Query: 432 WSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTME 491
WSSLI YA+ G AL F++M V P+++ ++ VL ACSH GL +E + M+
Sbjct: 251 WSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYFKRMQ 310
Query: 492 EELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTLLSSCKTHGNVDIA 551
+ G+ +++H+SC+VD+L+R G EA I+ P TW LL +C+ +G +++A
Sbjct: 311 GDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGEIELA 370
Query: 552 ERAAENILKLDPSNSAALVLLSSIHASAGNWEDVAKLR 589
E AA +L ++P N A VLL I+ S G E+ +LR
Sbjct: 371 EIAARELLMVEPENPANYVLLGKIYMSVGRQEEAERLR 408
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 88/351 (25%), Positives = 157/351 (44%), Gaps = 34/351 (9%)
Query: 22 NVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFP-DQLTFGSIIKACCIAGDIYLGRQL 80
++S T +S Y+ G +A+ +++QM S P D F +K+C A LG +
Sbjct: 11 KLISLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSV 70
Query: 81 HAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIKDLISWSSMIRGFTQLGYE 140
HAH +KS F + L+ MY V+HA +F I ++ + W++MI +T G
Sbjct: 71 HAHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKV 130
Query: 141 IEALYLFRDM------------------LRQGVY--------------QPNEFVLGSVFS 168
EA+ L+ M G Y +PN L ++ S
Sbjct: 131 KEAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVS 190
Query: 169 ACSSLLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVS 228
ACS++ ++IH + + + L + Y +CG + + F +E D+V+
Sbjct: 191 ACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVA 250
Query: 229 WNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIV 288
W+++I+A+A GDA A+ F++M + PD I FL++L AC+ ++ + +
Sbjct: 251 WSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYFKRMQ 310
Query: 289 -KVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSAC 338
G Y+ L+ + ++ +A V +A+ + +W A+L AC
Sbjct: 311 GDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGAC 361
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 99/410 (24%), Positives = 170/410 (41%), Gaps = 41/410 (10%)
Query: 120 SIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYG 179
S LIS + + + G +AL LF M + V +C++ P G
Sbjct: 8 SCTKLISLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLG 67
Query: 180 RQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADS 239
+H K + N F GC+L DMY KC + A+ F +I + V WNA+I+ +
Sbjct: 68 GSVHAHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHC 127
Query: 240 GDANEAISI---------------------------------FRQMMHIGLIPDSITFLS 266
G EA+ + +R+M+ P+ IT L+
Sbjct: 128 GKVKEAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLA 187
Query: 267 LLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNA 326
L+ AC++ A +IHSY + L + L+ Y +C ++ VF+++ ++
Sbjct: 188 LVSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSM-EDR 246
Query: 327 NLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVH 386
++V+W++++SA H A + F++M ++ P+ I N+L C+ A L V+
Sbjct: 247 DVVAWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSH-AGLADEALVY 305
Query: 387 CFSVKSGLVLDVSVSN--GLIDMYAKCGSVIHAQRVFDS-TENPNVISWSSLIVGYAMSG 443
++ L S + L+D+ ++ G A +V + E P +W +L+ A
Sbjct: 306 FKRMQGDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLG--ACRN 363
Query: 444 LGHEALNLFRKMRNLGVRP-NEVTYVGVLSACSHIGLVEEGWNLYNTMEE 492
G L L V P N YV + +G EE L M+E
Sbjct: 364 YGEIELAEIAARELLMVEPENPANYVLLGKIYMSVGRQEEAERLRLKMKE 413
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 131/293 (44%), Gaps = 42/293 (14%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMY-------------- 46
MYGKC S+ AR++FD + RN V W +MIS Y+ G+ EAV +Y
Sbjct: 92 MYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKEAVELYEAMDVMPNESSFNA 151
Query: 47 -------------------IQMLRSGFFPDQLTFGSIIKACCIAGDIYLGRQLHAHVIKS 87
+M+ F P+ +T +++ AC G L +++H++ ++
Sbjct: 152 IIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSACSAIGAFRLIKEIHSYAFRN 211
Query: 88 GFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIKDLISWSSMIRGFTQLGYEIEALYLF 147
H ++GL+ Y G + + VF + +D+++WSS+I + G AL F
Sbjct: 212 LIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWSSLISAYALHGDAESALKTF 271
Query: 148 RDMLRQGVYQPNEFVLGSVFSACSSL-LEPE---YGRQIHGICAKFGLVRNVFSGCSLCD 203
++M V P++ +V ACS L E Y +++ G +GL + L D
Sbjct: 272 QEMELAKV-TPDDIAFLNVLKACSHAGLADEALVYFKRMQG---DYGLRASKDHYSCLVD 327
Query: 204 MYAKCG-FLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHI 255
+ ++ G F + K E P +W A++ A + G+ A R+++ +
Sbjct: 328 VLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGEIELAEIAARELLMV 380
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 121/284 (42%), Gaps = 38/284 (13%)
Query: 327 NLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNL-LGTCAELASLEVGNQV 385
L+S LS+ + LF QM S P + +L L +CA +G V
Sbjct: 11 KLISLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSV 70
Query: 386 HCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLG 445
H SVKS + + V L+DMY KC SV HA+++FD N + W+++I Y G
Sbjct: 71 HAHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKV 130
Query: 446 HEALNL---------------------------------FRKMRNLGVRPNEVTYVGVLS 472
EA+ L +RKM +PN +T + ++S
Sbjct: 131 KEAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVS 190
Query: 473 ACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDI 532
ACS IG +++ L I P + S +V+ R G + + + + D D+
Sbjct: 191 ACSAIGAFRLIKEIHSYAFRNL-IEPHPQLKSGLVEAYGRCGSIVYVQ-LVFDSMEDRDV 248
Query: 533 TTWKTLLSSCKTHGNVDIAERAAE--NILKLDPSNSAALVLLSS 574
W +L+S+ HG+ + A + + + K+ P + A L +L +
Sbjct: 249 VAWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKA 292
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 216 bits (550), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 145/547 (26%), Positives = 268/547 (48%), Gaps = 33/547 (6%)
Query: 77 GRQLHAHVIKSGFGGHL----VAQNGLISMYTNFGQVAHASDVFTMISIKDLISWSSMIR 132
+Q+HA ++ + + HL V Q + + V + + + D SW ++R
Sbjct: 19 AKQVHAQLVVNRYN-HLEPILVHQTLHFTKEFSRNIVTYVKRILKGFNGHDSFSWGCLVR 77
Query: 133 GFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLV 192
+Q E + ++ DM G+ P+ + SV AC + G+ IH K GL
Sbjct: 78 FLSQHRKFKETVDVYIDMHNSGI-PPSSHAVTSVLRACGKMENMVDGKPIHAQALKNGLC 136
Query: 193 RNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQM 252
V+ L +Y++ G++ AK AF I + VSWN+++ + +SG+ +EA +F ++
Sbjct: 137 GCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELDEARRVFDKI 196
Query: 253 MHIGLIPDSITFLSLL--------CACTSPMALN---------------QGMQIHSYIVK 289
+ ++ S C+ S M L + M++
Sbjct: 197 PEKDAVSWNLIISSYAKKGDMGNACSLFSAMPLKSPASWNILIGGYVNCREMKLARTYFD 256
Query: 290 VGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFR 349
K + ++++ YTK ++ A +F +SK LV ++A+++ Q+ + + +
Sbjct: 257 AMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKLV-YDAMIACYTQNGKPKDALK 315
Query: 350 LFKQMLFSEN--KPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDM 407
LF QML + +P+ IT+++++ ++L + G V + + G+ +D +S LID+
Sbjct: 316 LFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYITEHGIKIDDLLSTSLIDL 375
Query: 408 YAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTY 467
Y K G A ++F + + +S+S++I+G ++G+ EA +LF M + PN VT+
Sbjct: 376 YMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGINGMATEANSLFTAMIEKKIPPNVVTF 435
Query: 468 VGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTG 527
G+LSA SH GLV+EG+ +N+M++ + P+ +H+ MVD+L RAG L EA I+
Sbjct: 436 TGLLSAYSHSGLVQEGYKCFNSMKDH-NLEPSADHYGIMVDMLGRAGRLEEAYELIKSMP 494
Query: 528 FDPDITTWKTLLSSCKTHGNVDIAERAAENILKLDPSNSAALVLLSSIHASAGNWEDVAK 587
P+ W LL + H NV+ E A + +KL+ + L L+ I++S G W+D
Sbjct: 495 MQPNAGVWGALLLASGLHNNVEFGEIACSHCVKLETDPTGYLSHLAMIYSSVGRWDDART 554
Query: 588 LRKVLDD 594
+R + +
Sbjct: 555 VRDSIKE 561
Score = 145 bits (367), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 116/454 (25%), Positives = 209/454 (46%), Gaps = 30/454 (6%)
Query: 12 RQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTFGSIIKACCIA 71
+++ + + SW ++ SQ+ + E V +YI M SG P S+++AC
Sbjct: 58 KRILKGFNGHDSFSWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKM 117
Query: 72 GDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIKDLISWSSMI 131
++ G+ +HA +K+G G + Q GL+ +Y+ G + A F I+ K+ +SW+S++
Sbjct: 118 ENMVDGKPIHAQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLL 177
Query: 132 RGFTQLGYEIEALYLFRDMLRQGVYQPNEFV-----LGSVFSACS-----SLLEPEYGRQ 181
G+ + G EA +F + + N + G + +ACS L P
Sbjct: 178 HGYLESGELDEARRVFDKIPEKDAVSWNLIISSYAKKGDMGNACSLFSAMPLKSPASWNI 237
Query: 182 IHG---ICAKFGLVRNVF------SGCSLCDM---YAKCGFLPSAKTAFYQIESPDLVSW 229
+ G C + L R F +G S M Y K G + SA+ F + D + +
Sbjct: 238 LIGGYVNCREMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKLVY 297
Query: 230 NAIIAAFADSGDANEAISIFRQMMHIG--LIPDSITFLSLLCACTSPMALNQGMQIHSYI 287
+A+IA + +G +A+ +F QM+ + PD IT S++ A + + G + SYI
Sbjct: 298 DAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYI 357
Query: 288 VKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGET 347
+ G + L SL+ +Y K + A +F ++K + VS++A++ C + A E
Sbjct: 358 TEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKK-DTVSYSAMIMGCGINGMATEA 416
Query: 348 FRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNG--LI 405
LF M+ + PN++T T LL + ++ G + CF+ L+ S + ++
Sbjct: 417 NSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYK--CFNSMKDHNLEPSADHYGIMV 474
Query: 406 DMYAKCGSVIHAQRVFDSTE-NPNVISWSSLIVG 438
DM + G + A + S PN W +L++
Sbjct: 475 DMLGRAGRLEEAYELIKSMPMQPNAGVWGALLLA 508
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 97/369 (26%), Positives = 169/369 (45%), Gaps = 32/369 (8%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
+Y + G ++ A++ FD + +N VSW S++ GY ++G+ +EA ++ ++ D ++
Sbjct: 148 LYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELDEARRVFDKIPEK----DAVS 203
Query: 61 FGSIIKACCIAGD--------------------IYLGRQLHAHVIK--SGFGGHLVAQNG 98
+ II + GD I +G ++ +K + + +NG
Sbjct: 204 WNLIISSYAKKGDMGNACSLFSAMPLKSPASWNILIGGYVNCREMKLARTYFDAMPQKNG 263
Query: 99 -----LISMYTNFGQVAHASDVFTMISIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQ 153
+IS YT G V A ++F ++S KD + + +MI +TQ G +AL LF ML +
Sbjct: 264 VSWITMISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIACYTQNGKPKDALKLFAQMLER 323
Query: 154 GVY-QPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLP 212
Y QP+E L SV SA S L +G + + G+ + SL D+Y K G
Sbjct: 324 NSYIQPDEITLSSVVSANSQLGNTSFGTWVESYITEHGIKIDDLLSTSLIDLYMKGGDFA 383
Query: 213 SAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACT 272
A F + D VS++A+I +G A EA S+F M+ + P+ +TF LL A +
Sbjct: 384 KAFKMFSNLNKKDTVSYSAMIMGCGINGMATEANSLFTAMIEKKIPPNVVTFTGLLSAYS 443
Query: 273 SPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWN 332
+ +G + + + Y ++ M + L +A + +++ N W
Sbjct: 444 HSGLVQEGYKCFNSMKDHNLEPSADHYGIMVDMLGRAGRLEEAYELIKSMPMQPNAGVWG 503
Query: 333 AILSACLQH 341
A+L A H
Sbjct: 504 ALLLASGLH 512
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/322 (24%), Positives = 146/322 (45%), Gaps = 27/322 (8%)
Query: 275 MALNQGMQIHSYIVKVGFNK-EVALYNSLLTMYTKCSNLHDALSVFEAISKNAN---LVS 330
+ L Q Q+H+ +V +N E L + L + S + ++ + I K N S
Sbjct: 14 VVLEQAKQVHAQLVVNRYNHLEPILVHQTLHFTKEFS--RNIVTYVKRILKGFNGHDSFS 71
Query: 331 WNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSV 390
W ++ QH++ ET ++ M S P+ +T++L C ++ ++ G +H ++
Sbjct: 72 WGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKMENMVDGKPIHAQAL 131
Query: 391 KSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALN 450
K+GL V V GL+ +Y++ G + A++ FD N +SW+SL+ GY SG EA
Sbjct: 132 KNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELDEARR 191
Query: 451 LFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLL 510
+F K+ + V++ ++S+ + G + +L++ M P + S + +
Sbjct: 192 VFDKIP----EKDAVSWNLIISSYAKKGDMGNACSLFSAM-------PLKSPASWNILIG 240
Query: 511 ARAGCLYEAETFIRKTGFD----PDITTWKTLLSSCKTHGNVDIAERAAENILKLDPSNS 566
C E + +T FD + +W T++S G+V AE + K D
Sbjct: 241 GYVNC---REMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKLVY 297
Query: 567 AALVLLSSIHASAGNWEDVAKL 588
A++ + + G +D KL
Sbjct: 298 DAMI---ACYTQNGKPKDALKL 316
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 211 bits (538), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 114/386 (29%), Positives = 201/386 (52%), Gaps = 11/386 (2%)
Query: 224 PDLVSWNAIIAAFA--DSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGM 281
PD ++ + A A +GD ++ Q + GL+ D T +L+ + ++ +
Sbjct: 113 PDFHTFPFVFKACAAKKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSAL 172
Query: 282 QIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQH 341
Q+ ++V YN L+ K + A +F+++ +LVSWN+++S Q
Sbjct: 173 QLFDE----NPQRDVVTYNVLIDGLVKAREIVRARELFDSMPLR-DLVSWNSLISGYAQM 227
Query: 342 KQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVS 401
E +LF +M+ KP+ + I + L CA+ + G +H ++ + L +D ++
Sbjct: 228 NHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLA 287
Query: 402 NGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVR 461
GL+D YAKCG + A +F+ + + +W+++I G AM G G ++ FRKM + G++
Sbjct: 288 TGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIK 347
Query: 462 PNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAET 521
P+ VT++ VL CSH GLV+E NL++ M + +H+ CM DLL RAG + EA
Sbjct: 348 PDGVTFISVLVGCSHSGLVDEARNLFDQMRSLYDVNREMKHYGCMADLLGRAGLIEEAAE 407
Query: 522 FIRKTGFD----PDITTWKTLLSSCKTHGNVDIAERAAENILKLDPSNSAALVLLSSIHA 577
I + D + W LL C+ HGN++IAE+AA + L P + ++ ++A
Sbjct: 408 MIEQMPKDGGNREKLLAWSGLLGGCRIHGNIEIAEKAANRVKALSPEDGGVYKVMVEMYA 467
Query: 578 SAGNWEDVAKLRKVLDDGYDPAQRLG 603
+A WE+V K+R+++D + +G
Sbjct: 468 NAERWEEVVKVREIIDRDKKVKKNVG 493
Score = 139 bits (349), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 85/334 (25%), Positives = 154/334 (46%), Gaps = 39/334 (11%)
Query: 46 YIQMLRSGFFPDQLTFGSIIKACCIA--GDIYLGRQLHAHVIKSGFGGHLVAQNGLISMY 103
+++M R PD TF + KAC GD+ L + LH ++ G L N LI +Y
Sbjct: 103 FVEMRRRSVPPDFHTFPFVFKACAAKKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIRVY 162
Query: 104 TNFG-------------------------------QVAHASDVFTMISIKDLISWSSMIR 132
+ ++ A ++F + ++DL+SW+S+I
Sbjct: 163 SLIAPIDSALQLFDENPQRDVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLIS 222
Query: 133 GFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLV 192
G+ Q+ + EA+ LF +M+ G+ +P+ + S SAC+ + + G+ IH + L
Sbjct: 223 GYAQMNHCREAIKLFDEMVALGL-KPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLF 281
Query: 193 RNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQM 252
+ F L D YAKCGF+ +A F L +WNA+I A G+ + FR+M
Sbjct: 282 IDSFLATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKM 341
Query: 253 MHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKV-GFNKEVALYNSLLTMYTKCSN 311
+ G+ PD +TF+S+L C+ +++ + + + N+E+ Y + + +
Sbjct: 342 VSSGIKPDGVTFISVLVGCSHSGLVDEARNLFDQMRSLYDVNREMKHYGCMADLLGRAGL 401
Query: 312 LHDALSVFEAISKNA----NLVSWNAILSACLQH 341
+ +A + E + K+ L++W+ +L C H
Sbjct: 402 IEEAAEMIEQMPKDGGNREKLLAWSGLLGGCRIH 435
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 111/236 (47%), Gaps = 21/236 (8%)
Query: 11 ARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTFGSIIKACCI 70
AR++FD+M LR++VSW S+ISGY+Q EA+ ++ +M+ G PD + S + AC
Sbjct: 202 ARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQ 261
Query: 71 AGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIKDLISWSSM 130
+GD G+ +H + + GL+ Y G + A ++F + S K L +W++M
Sbjct: 262 SGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAM 321
Query: 131 IRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFG 190
I G G + FR M+ G+ +P+ SV CS + R + F
Sbjct: 322 ITGLAMHGNGELTVDYFRKMVSSGI-KPDGVTFISVLVGCSHSGLVDEARNL------FD 374
Query: 191 LVRNVFS--------GCSLCDMYAKCGFLPSAKTAFYQIES-----PDLVSWNAII 233
+R+++ GC + D+ + G + A Q+ L++W+ ++
Sbjct: 375 QMRSLYDVNREMKHYGC-MADLLGRAGLIEEAAEMIEQMPKDGGNREKLLAWSGLL 429
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 44/79 (55%)
Query: 2 YGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTF 61
Y KCG + A ++F+ + + +W +MI+G + +G G V + +M+ SG PD +TF
Sbjct: 294 YAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTF 353
Query: 62 GSIIKACCIAGDIYLGRQL 80
S++ C +G + R L
Sbjct: 354 ISVLVGCSHSGLVDEARNL 372
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 211 bits (538), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 146/536 (27%), Positives = 252/536 (47%), Gaps = 91/536 (16%)
Query: 11 ARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTFGSIIKACCI 70
R +FD++ NV SM +S+ N+ + +Y Q R G PD +F +IK+
Sbjct: 59 TRLIFDSVTFPNVFVVNSMFKYFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKSAGR 118
Query: 71 AGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIKDLISWSSM 130
G ++ A V K GF +N ++ MY V A VF IS + W+ M
Sbjct: 119 FGILF-----QALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVM 173
Query: 131 IRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFG 190
I G+ + G + EA LF DM+ PE
Sbjct: 174 ISGYWKWGNKEEACKLF-DMM------------------------PE------------- 195
Query: 191 LVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFR 250
+V S + +AK L +A+ F ++ +VSWNA+++ +A +G +A+ +F
Sbjct: 196 --NDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFN 253
Query: 251 QMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVAL----YNSLLTMY 306
M+ +G+ P+ T++ ++ AC+ + +VK+ K V L +LL M+
Sbjct: 254 DMLRLGVRPNETTWVIVISACS----FRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMH 309
Query: 307 TKCSNLHDALSVFEAISKNANLVSWNAILSACLQ-------------------------- 340
KC ++ A +F + NLV+WNA++S +
Sbjct: 310 AKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLI 369
Query: 341 -----HKQAGETFRLFKQML-FSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGL 394
+ QA F+ M+ + ++KP+ +T+ ++L C +A LE+G+ + + K+ +
Sbjct: 370 AGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQI 429
Query: 395 VLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRK 454
L+ S LI MYA+ G++ A+RVFD + +V+S+++L +A +G G E LNL K
Sbjct: 430 KLNDSGYRSLIFMYARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVETLNLLSK 489
Query: 455 MRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLL 510
M++ G+ P+ VTY VL+AC+ GL++EG ++ ++ P +H++CM DLL
Sbjct: 490 MKDEGIEPDRVTYTSVLTACNRAGLLKEGQRIFKSIRN-----PLADHYACM-DLL 539
Score = 162 bits (410), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 102/318 (32%), Positives = 160/318 (50%), Gaps = 32/318 (10%)
Query: 2 YGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTF 61
+ K +++AR+ FD M ++VVSW +M+SGY+QNG +A+ ++ MLR G P++ T+
Sbjct: 208 FAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTW 267
Query: 62 GSIIKACCIAGDIYLGRQL----------------------HAHV--IKS--------GF 89
+I AC D L R L HA I+S G
Sbjct: 268 VIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGT 327
Query: 90 GGHLVAQNGLISMYTNFGQVAHASDVFTMISIKDLISWSSMIRGFTQLGYEIEALYLFRD 149
+LV N +IS YT G ++ A +F + ++++SW+S+I G+ G A+ F D
Sbjct: 328 QRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFED 387
Query: 150 MLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCG 209
M+ G +P+E + SV SAC + + E G I K + N SL MYA+ G
Sbjct: 388 MIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGG 447
Query: 210 FLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLC 269
L AK F +++ D+VS+N + AFA +GD E +++ +M G+ PD +T+ S+L
Sbjct: 448 NLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLT 507
Query: 270 ACTSPMALNQGMQIHSYI 287
AC L +G +I I
Sbjct: 508 ACNRAGLLKEGQRIFKSI 525
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 104/206 (50%), Gaps = 13/206 (6%)
Query: 2 YGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSG-FFPDQLT 60
Y + G M ARQ+FD M RNVVSW S+I+GY+ NGQ A+ + M+ G PD++T
Sbjct: 341 YTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVT 400
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMIS 120
S++ AC D+ LG + ++ K+ + LI MY G + A VF +
Sbjct: 401 MISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMK 460
Query: 121 IKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGR 180
+D++S++++ F G +E L L M +G+ +P+ SV +AC+ + G+
Sbjct: 461 ERDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGI-EPDRVTYTSVLTACNRAGLLKEGQ 519
Query: 181 QIHGICAKFGLVRNVFSGCSLCDMYA 206
+I F +RN L D YA
Sbjct: 520 RI------FKSIRN-----PLADHYA 534
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 56/92 (60%), Gaps = 1/92 (1%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
MY + G++ +A++VFD M R+VVS+ ++ + ++ NG G E + + +M G PD++T
Sbjct: 442 MYARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVT 501
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSGFGGH 92
+ S++ AC AG + G+++ I++ H
Sbjct: 502 YTSVLTACNRAGLLKEGQRIFKS-IRNPLADH 532
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/258 (21%), Positives = 104/258 (40%), Gaps = 33/258 (12%)
Query: 318 VFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELA 377
+F++++ N+ N++ + A + RL++Q P+ + ++ +
Sbjct: 62 IFDSVT-FPNVFVVNSMFKYFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKSAGRFG 120
Query: 378 SLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIV 437
L K G D V N ++DMY K SV A++VFD W+ +I
Sbjct: 121 IL-----FQALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMIS 175
Query: 438 GYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIP 497
GY G EA LF M V V++ +++ + + +E ++ M E+ +
Sbjct: 176 GYWKWGNKEEACKLFDMMPENDV----VSWTVMITGFAKVKDLENARKYFDRMPEKSVV- 230
Query: 498 PAREHFSCMVDLLARAGCLYEAETFIR---KTGFDPDITTWKTLLSSCKTHGNVDIAERA 554
++ M+ A+ G +A + G P+ TTW ++S+C
Sbjct: 231 ----SWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACS----------- 275
Query: 555 AENILKLDPSNSAALVLL 572
+ DPS + +LV L
Sbjct: 276 ----FRADPSLTRSLVKL 289
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 210 bits (534), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 131/416 (31%), Positives = 221/416 (53%), Gaps = 2/416 (0%)
Query: 179 GRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFAD 238
G Q+HG K GL +L + Y+K ++ AF +W++II+ FA
Sbjct: 34 GLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKSSTTWSSIISCFAQ 93
Query: 239 SGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVAL 298
+ ++ ++MM L PD S +C + G +H +K G++ +V +
Sbjct: 94 NELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFV 153
Query: 299 YNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSE 358
+SL+ MY KC + A +F+ + + N+V+W+ ++ Q + E LFK+ LF
Sbjct: 154 GSSLVDMYAKCGEIVYARKMFDEMPQR-NVVTWSGMMYGYAQMGENEEALWLFKEALFEN 212
Query: 359 NKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQ 418
N + ++++ CA LE+G Q+H S+KS V + L+ +Y+KCG A
Sbjct: 213 LAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAY 272
Query: 419 RVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIG 478
+VF+ N+ W++++ YA + + LF++M+ G++PN +T++ VL+ACSH G
Sbjct: 273 QVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAG 332
Query: 479 LVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTL 538
LV+EG ++ M+E I P +H++ +VD+L RAG L EA I DP + W L
Sbjct: 333 LVDEGRYYFDQMKESR-IEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGAL 391
Query: 539 LSSCKTHGNVDIAERAAENILKLDPSNSAALVLLSSIHASAGNWEDVAKLRKVLDD 594
L+SC H N ++A AA+ + +L P +S + LS+ +A+ G +ED AK RK+L D
Sbjct: 392 LTSCTVHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADGRFEDAAKARKLLRD 447
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 97/341 (28%), Positives = 174/341 (51%), Gaps = 1/341 (0%)
Query: 2 YGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTF 61
Y K D+R+ F+ ++ +W+S+IS ++QN ++ +M+ PD
Sbjct: 60 YSKSQLPFDSRRAFEDSPQKSSTTWSSIISCFAQNELPWMSLEFLKKMMAGNLRPDDHVL 119
Query: 62 GSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISI 121
S K+C I +GR +H +K+G+ + + L+ MY G++ +A +F +
Sbjct: 120 PSATKSCAILSRCDIGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQ 179
Query: 122 KDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQ 181
+++++WS M+ G+ Q+G EAL+LF++ L + + N++ SV S C++ E GRQ
Sbjct: 180 RNVVTWSGMMYGYAQMGENEEALWLFKEALFENL-AVNDYSFSSVISVCANSTLLELGRQ 238
Query: 182 IHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGD 241
IHG+ K + F G SL +Y+KCG A F ++ +L WNA++ A+A
Sbjct: 239 IHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSH 298
Query: 242 ANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNS 301
+ I +F++M G+ P+ ITFL++L AC+ +++G + + Y S
Sbjct: 299 TQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGRYYFDQMKESRIEPTDKHYAS 358
Query: 302 LLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHK 342
L+ M + L +AL V + + W A+L++C HK
Sbjct: 359 LVDMLGRAGRLQEALEVITNMPIDPTESVWGALLTSCTVHK 399
Score = 145 bits (367), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 107/362 (29%), Positives = 174/362 (48%), Gaps = 3/362 (0%)
Query: 77 GRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIKDLISWSSMIRGFTQ 136
G QLH +V+KSG + N LI+ Y+ + F K +WSS+I F Q
Sbjct: 34 GLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKSSTTWSSIISCFAQ 93
Query: 137 LGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVF 196
+L + M+ G +P++ VL S +C+ L + GR +H + K G +VF
Sbjct: 94 NELPWMSLEFLKKMM-AGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVF 152
Query: 197 SGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIG 256
G SL DMYAKCG + A+ F ++ ++V+W+ ++ +A G+ EA+ +F++ +
Sbjct: 153 VGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFEN 212
Query: 257 LIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDAL 316
L + +F S++ C + L G QIH +K F+ + +SL+++Y+KC A
Sbjct: 213 LAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAY 272
Query: 317 SVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAEL 376
VF + NL WNA+L A QH + LFK+M S KPN IT N+L C+
Sbjct: 273 QVFNEVPVK-NLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHA 331
Query: 377 ASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTE-NPNVISWSSL 435
++ G +S + L+DM + G + A V + +P W +L
Sbjct: 332 GLVDEGRYYFDQMKESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGAL 391
Query: 436 IV 437
+
Sbjct: 392 LT 393
Score = 119 bits (297), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 126/223 (56%), Gaps = 5/223 (2%)
Query: 267 LLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNA 326
LL + + +G+Q+H Y+VK G + + N+L+ Y+K D+ FE S
Sbjct: 21 LLLSSARTRSTIKGLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFED-SPQK 79
Query: 327 NLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVH 386
+ +W++I+S Q++ + K+M+ +P+ + + +CA L+ ++G VH
Sbjct: 80 SSTTWSSIISCFAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVH 139
Query: 387 CFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGH 446
C S+K+G DV V + L+DMYAKCG +++A+++FD NV++WS ++ GYA G
Sbjct: 140 CLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENE 199
Query: 447 EALNLFRK--MRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLY 487
EAL LF++ NL V N+ ++ V+S C++ L+E G ++
Sbjct: 200 EALWLFKEALFENLAV--NDYSFSSVISVCANSTLLELGRQIH 240
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 116/236 (49%), Gaps = 2/236 (0%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
MY KCG + AR++FD M RNVV+W+ M+ GY+Q G+ EA+ ++ + L + +
Sbjct: 160 MYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYS 219
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMIS 120
F S+I C + + LGRQ+H IKS F + L+S+Y+ G A VF +
Sbjct: 220 FSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVP 279
Query: 121 IKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGR 180
+K+L W++M++ + Q + + + LF+ M G+ +PN +V +ACS + GR
Sbjct: 280 VKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGM-KPNFITFLNVLNACSHAGLVDEGR 338
Query: 181 QIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIE-SPDLVSWNAIIAA 235
+ + SL DM + G L A + P W A++ +
Sbjct: 339 YYFDQMKESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGALLTS 394
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 209 bits (533), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 123/388 (31%), Positives = 198/388 (51%), Gaps = 34/388 (8%)
Query: 180 RQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADS 239
+QIH K L + L + + G A F Q++SP +WN +I + + +
Sbjct: 37 KQIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSPSTFTWNLMIRSLSVN 96
Query: 240 GDANEAISIFRQMM--HIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVA 297
EA+ +F MM H D TF ++ AC + ++ G Q+H +K GF +V
Sbjct: 97 HKPREALLLFILMMISHQSQF-DKFTFPFVIKACLASSSIRLGTQVHGLAIKAGFFNDVF 155
Query: 298 LYNSLLTMYTKCSNLHDALSVFEAISKNA------------------------------N 327
N+L+ +Y KC VF+ + + N
Sbjct: 156 FQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRN 215
Query: 328 LVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHC 387
+VSW A+++A +++++ E F+LF++M + KPN TI NLL +L SL +G VH
Sbjct: 216 VVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGRWVHD 275
Query: 388 FSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHE 447
++ K+G VLD + LIDMY+KCGS+ A++VFD + ++ +W+S+I + G G E
Sbjct: 276 YAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNSMITSLGVHGCGEE 335
Query: 448 ALNLFRKMRNLG-VRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCM 506
AL+LF +M V P+ +T+VGVLSAC++ G V++G + M + GI P REH +CM
Sbjct: 336 ALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMIQVYGISPIREHNACM 395
Query: 507 VDLLARAGCLYEAETFIRKTGFDPDITT 534
+ LL +A + +A + DPD +
Sbjct: 396 IQLLEQALEVEKASNLVESMDSDPDFNS 423
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 95/320 (29%), Positives = 157/320 (49%), Gaps = 38/320 (11%)
Query: 6 GSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQML---RSGFFPDQLTFG 62
G + A VF+ + + +W MI S N + EA++++I M+ +S F D+ TF
Sbjct: 66 GETQYASLVFNQLQSPSTFTWNLMIRSLSVNHKPREALLLFILMMISHQSQF--DKFTFP 123
Query: 63 SIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFG--------------- 107
+IKAC + I LG Q+H IK+GF + QN L+ +Y G
Sbjct: 124 FVIKACLASSSIRLGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGR 183
Query: 108 ----------------QVAHASDVFTMISIKDLISWSSMIRGFTQLGYEIEALYLFRDML 151
Q+ A VF + +++++SW++MI + + EA LFR M
Sbjct: 184 SIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQ 243
Query: 152 RQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFL 211
V +PNEF + ++ A + L GR +H K G V + F G +L DMY+KCG L
Sbjct: 244 VDDV-KPNEFTIVNLLQASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSL 302
Query: 212 PSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLI-PDSITFLSLLCA 270
A+ F ++ L +WN++I + G EA+S+F +M + PD+ITF+ +L A
Sbjct: 303 QDARKVFDVMQGKSLATWNSMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSA 362
Query: 271 CTSPMALNQGMQIHSYIVKV 290
C + + G++ + +++V
Sbjct: 363 CANTGNVKDGLRYFTRMIQV 382
Score = 142 bits (357), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 97/337 (28%), Positives = 160/337 (47%), Gaps = 33/337 (9%)
Query: 78 RQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIKDLISWSSMIRGFTQL 137
+Q+H +IK + LIS+ ++FG+ +AS VF + +W+ MIR +
Sbjct: 37 KQIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSPSTFTWNLMIRSLSVN 96
Query: 138 GYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFS 197
EAL LF M+ Q ++F V AC + G Q+HG+ K G +VF
Sbjct: 97 HKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQVHGLAIKAGFFNDVFF 156
Query: 198 GCSLCDMYAKCGF-------------------------------LPSAKTAFYQIESPDL 226
+L D+Y KCG L SA+ F Q+ ++
Sbjct: 157 QNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNV 216
Query: 227 VSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSY 286
VSW A+I A+ + +EA +FR+M + P+ T ++LL A T +L+ G +H Y
Sbjct: 217 VSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGRWVHDY 276
Query: 287 IVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGE 346
K GF + L +L+ MY+KC +L DA VF+ + + +L +WN+++++ H E
Sbjct: 277 AHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVM-QGKSLATWNSMITSLGVHGCGEE 335
Query: 347 TFRLFKQMLFSEN-KPNMITITNLLGTCAELASLEVG 382
LF++M + +P+ IT +L CA +++ G
Sbjct: 336 ALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDG 372
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 141/313 (45%), Gaps = 57/313 (18%)
Query: 277 LNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILS 336
+Q QIH+ I+K + L L+++ + A VF + ++ + +WN ++
Sbjct: 33 FSQLKQIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQL-QSPSTFTWNLMIR 91
Query: 337 ACLQHKQAGETFRLFKQMLFS-ENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLV 395
+ + + E LF M+ S +++ + T ++ C +S+ +G QVH ++K+G
Sbjct: 92 SLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQVHGLAIKAGFF 151
Query: 396 LDVSVSNGLIDMYAKCGSVIHAQRVFDS-----------------------------TEN 426
DV N L+D+Y KCG ++VFD +
Sbjct: 152 NDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQM 211
Query: 427 P--NVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGW 484
P NV+SW+++I Y + EA LFR+M+ V+PNE T V +L A + +G + G
Sbjct: 212 PMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGR 271
Query: 485 NLYNTMEEE-------LGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFD----PDIT 533
+++ + LG + ++D+ ++ G L +A RK FD +
Sbjct: 272 WVHDYAHKNGFVLDCFLG--------TALIDMYSKCGSLQDA----RKV-FDVMQGKSLA 318
Query: 534 TWKTLLSSCKTHG 546
TW ++++S HG
Sbjct: 319 TWNSMITSLGVHG 331
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMY-IQMLRSGFFPDQL 59
MY KCGS++DAR+VFD M +++ +W SMI+ +G G EA+ ++ + PD +
Sbjct: 295 MYSKCGSLQDARKVFDVMQGKSLATWNSMITSLGVHGCGEEALSLFEEMEEEASVEPDAI 354
Query: 60 TFGSIIKACCIAGDIYLGRQLHAHVIK 86
TF ++ AC G++ G + +I+
Sbjct: 355 TFVGVLSACANTGNVKDGLRYFTRMIQ 381
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 209 bits (531), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 124/398 (31%), Positives = 198/398 (49%), Gaps = 33/398 (8%)
Query: 230 NAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVK 289
N + A+ S +A+ + ++ G +PDS TF+SL+ ++ G H +K
Sbjct: 87 NPVFKAYLVSSSPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIK 146
Query: 290 VGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISK------------------------- 324
G ++ + + NSL+ MYT C L A +F I K
Sbjct: 147 HGCDQVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKL 206
Query: 325 -----NANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASL 379
+ N++SWN ++SA L G + LF++M+ + + N T+ LL C A L
Sbjct: 207 FDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARL 266
Query: 380 EVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGY 439
+ G VH +++ L V + LIDMY KC V A+R+FDS N ++W+ +I+ +
Sbjct: 267 KEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAH 326
Query: 440 AMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPA 499
+ G L LF M N +RP+EVT+VGVL C+ GLV +G + Y+ M +E I P
Sbjct: 327 CLHGRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPN 386
Query: 500 REHFSCMVDLLARAGCLYEAETFIRK---TGFDPDITTWKTLLSSCKTHGNVDIAERAAE 556
H CM +L + AG EAE ++ P+ T W LLSS + GN + E A+
Sbjct: 387 FGHQWCMANLYSSAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTGNPTLGESIAK 446
Query: 557 NILKLDPSNSAALVLLSSIHASAGNWEDVAKLRKVLDD 594
++++ DP N LL +I++ G WEDV ++R+++ +
Sbjct: 447 SLIETDPLNYKYYHLLMNIYSVTGRWEDVNRVREMVKE 484
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 131/295 (44%), Gaps = 40/295 (13%)
Query: 29 MISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTFGSII----KACCIAGDIYLGRQLHAHV 84
+ Y + +A+ Y +LR GF PD TF S+I K CC+ G+ H
Sbjct: 89 VFKAYLVSSSPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDS----GKMCHGQA 144
Query: 85 IKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIKDLISWSSMIRGFTQLGYEIEA- 143
IK G L QN L+ MYT G + A +F I +D++SW+S+I G + G + A
Sbjct: 145 IKHGCDQVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAH 204
Query: 144 ------------------------------LYLFRDMLRQGVYQPNEFVLGSVFSACSSL 173
+ LFR+M+R G +Q NE L + +AC
Sbjct: 205 KLFDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAG-FQGNESTLVLLLNACGRS 263
Query: 174 LEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAII 233
+ GR +H + L +V +L DMY KC + A+ F + + V+WN +I
Sbjct: 264 ARLKEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMI 323
Query: 234 AAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIV 288
A G + +F M++ L PD +TF+ +LC C ++QG +S +V
Sbjct: 324 LAHCLHGRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMV 378
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 98/406 (24%), Positives = 169/406 (41%), Gaps = 50/406 (12%)
Query: 79 QLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIKDLISWSSMIRGFTQLG 138
Q+HA +I SG L+ + FG ++ ++ SI L + + + +
Sbjct: 40 QVHARLITSGNFWDSSWAIRLLKSSSRFGDSSYTVSIYR--SIGKLYCANPVFKAYLVSS 97
Query: 139 YEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFSG 198
+AL + D+LR G + P+ + S+ S + G+ HG K G + +
Sbjct: 98 SPKQALGFYFDILRFG-FVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIKHGCDQVLPVQ 156
Query: 199 CSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNA--------------------------- 231
SL MY CG L AK F +I D+VSWN+
Sbjct: 157 NSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNII 216
Query: 232 ----IIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYI 287
+I+A+ + + +IS+FR+M+ G + T + LL AC L +G +H+ +
Sbjct: 217 SWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASL 276
Query: 288 VKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNA-ILSACLQHKQAGE 346
++ N V + +L+ MY KC + A +F+++S N V+WN IL+ CL + G
Sbjct: 277 IRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIR-NKVTWNVMILAHCLHGRPEG- 334
Query: 347 TFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQ-----VHCFSVKSGLVLDVSVS 401
LF+ M+ +P+ +T +L CA + G V F +K ++
Sbjct: 335 GLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPNFGHQWCMA 394
Query: 402 NGLIDMYAKCGSVIHAQRVF----DSTENPNVISWSSLIVGYAMSG 443
N +Y+ G A+ D P W++L+ +G
Sbjct: 395 N----LYSSAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTG 436
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 119/254 (46%), Gaps = 6/254 (2%)
Query: 6 GSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTFGSII 65
G + A ++FD M +N++SW MIS Y ++ ++ +M+R+GF ++ T ++
Sbjct: 198 GDVLAAHKLFDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLL 257
Query: 66 KACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIKDLI 125
AC + + GR +HA +I++ +V LI MY +V A +F +SI++ +
Sbjct: 258 NACGRSARLKEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKV 317
Query: 126 SWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGI 185
+W+ MI G L LF M+ G+ +P+E V C+ G+ + +
Sbjct: 318 TWNVMILAHCLHGRPEGGLELFEAMI-NGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSL 376
Query: 186 CA-KFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIE----SPDLVSWNAIIAAFADSG 240
+F + N + ++Y+ GF A+ A + +P+ W ++++ +G
Sbjct: 377 MVDEFQIKPNFGHQWCMANLYSSAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTG 436
Query: 241 DANEAISIFRQMMH 254
+ SI + ++
Sbjct: 437 NPTLGESIAKSLIE 450
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 75/171 (43%), Gaps = 18/171 (10%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
MYGKC + AR++FD++ +RN V+W MI + +G+ + ++ M+ PD++T
Sbjct: 294 MYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGRPEGGLELFEAMINGMLRPDEVT 353
Query: 61 FGSIIKACCIAGDIYLGRQLHAHV-----IKSGFGGHLVAQNGLISMYTNFGQVAHASDV 115
F ++ C AG + G+ ++ + IK FG N +Y++ G A +
Sbjct: 354 FVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPNFGHQWCMAN----LYSSAGFPEEAEEA 409
Query: 116 FTMISIKDL----ISW-----SSMIRGFTQLGYEIEALYLFRDMLRQGVYQ 157
+ +D+ W SS G LG I + D L Y
Sbjct: 410 LKNLPDEDVTPESTKWANLLSSSRFTGNPTLGESIAKSLIETDPLNYKYYH 460
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 200 bits (509), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 112/359 (31%), Positives = 187/359 (52%), Gaps = 36/359 (10%)
Query: 267 LLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVF------- 319
+L +C +P +Q H+ I K+G+ +L S + Y +C+ + A +
Sbjct: 36 VLESCKAPSNSKCVLQAHAQIFKLGYGTYPSLLVSTVAAYRRCNRSYLARRLLLWFLSLS 95
Query: 320 ----------------------EAISKNA---NLVSWNAILSACLQHKQAGETFRLFKQM 354
+ + +NA N+++WN ++ +++ Q E + K M
Sbjct: 96 PGVCNINLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNM 155
Query: 355 L-FSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGS 413
L F++ KPN + + L CA L L VH + SG+ L+ +S+ L+D+YAKCG
Sbjct: 156 LSFTDIKPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGD 215
Query: 414 VIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSA 473
+ ++ VF S + +V W+++I G+A GL EA+ +F +M V P+ +T++G+L+
Sbjct: 216 IGTSREVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTT 275
Query: 474 CSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDIT 533
CSH GL+EEG + M I P EH+ MVDLL RAG + EA I +PD+
Sbjct: 276 CSHCGLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVV 335
Query: 534 TWKTLLSSCKTHGNVDIAERAAENILKLDPSNSAALVLLSSIHASAGNWEDVAKLRKVL 592
W++LLSS +T+ N ++ E A +N L + S VLLS+I++S WE K+R+++
Sbjct: 336 IWRSLLSSSRTYKNPELGEIAIQN---LSKAKSGDYVLLSNIYSSTKKWESAQKVRELM 391
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 129/248 (52%), Gaps = 3/248 (1%)
Query: 97 NGLISMYTNFGQVAHASDVFTMISIKDLISWSSMIRGFTQ-LGYEIEALYLFRDMLRQGV 155
N +I G+ A V S +++I+W+ MI G+ + + YE EAL ++ML
Sbjct: 102 NLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYE-EALKALKNMLSFTD 160
Query: 156 YQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAK 215
+PN+F S +AC+ L + + + +H + G+ N +L D+YAKCG + +++
Sbjct: 161 IKPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSR 220
Query: 216 TAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPM 275
FY ++ D+ WNA+I FA G A EAI +F +M + PDSITFL LL C+
Sbjct: 221 EVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCG 280
Query: 276 ALNQGMQIHSYIV-KVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAI 334
L +G + + + ++ Y +++ + + + +A + E++ ++V W ++
Sbjct: 281 LLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSL 340
Query: 335 LSACLQHK 342
LS+ +K
Sbjct: 341 LSSSRTYK 348
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 118/238 (49%), Gaps = 10/238 (4%)
Query: 4 KCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLR-SGFFPDQLTFG 62
K G A++V +NV++W MI GY +N Q EA+ ML + P++ +F
Sbjct: 110 KIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFA 169
Query: 63 SIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIK 122
S + AC GD++ + +H+ +I SG + + + L+ +Y G + + +VF +
Sbjct: 170 SSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRN 229
Query: 123 DLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQI 182
D+ W++MI GF G EA+ +F +M + V P+ + + CS E G++
Sbjct: 230 DVSIWNAMITGFATHGLATEAIRVFSEMEAEHV-SPDSITFLGLLTTCSHCGLLEEGKEY 288
Query: 183 HGICA-KFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIES----PDLVSWNAIIAA 235
G+ + +F + + ++ D+ + G K A+ IES PD+V W +++++
Sbjct: 289 FGLMSRRFSIQPKLEHYGAMVDLLGRAG---RVKEAYELIESMPIEPDVVIWRSLLSS 343
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 67/133 (50%), Gaps = 2/133 (1%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
+Y KCG + +R+VF ++ +V W +MI+G++ +G EA+ ++ +M PD +T
Sbjct: 209 VYAKCGDIGTSREVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSIT 268
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKS-GFGGHLVAQNGLISMYTNFGQVAHASDVFTMI 119
F ++ C G + G++ + + L ++ + G+V A ++ +
Sbjct: 269 FLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESM 328
Query: 120 SIK-DLISWSSMI 131
I+ D++ W S++
Sbjct: 329 PIEPDVVIWRSLL 341
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 197 bits (501), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 122/371 (32%), Positives = 192/371 (51%), Gaps = 37/371 (9%)
Query: 260 DSITFLSLLCACTSPM--ALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALS 317
DS T+L LL A ++P +L G+ +H +K+GF V + +L+ MY N+ DA
Sbjct: 120 DSFTYLFLLKASSNPRFPSLLLGIGLHGLTLKLGFESHVYVQTALVGMYLVGGNMIDAHK 179
Query: 318 VFEAISK------------------------------NANLVSWNAILSACLQHKQAGET 347
VF+ + + N +VSW I+ + + E
Sbjct: 180 VFDEMPERNPVTWNVMITGLTNLGDFEKALCFLEKMPNRTVVSWTTIIDGYARVDKPKEA 239
Query: 348 FRLFKQMLFSEN-KPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLV-LDVSVSNGLI 405
LF +M+ + KPN ITI +L L L++ VH + K G V D+ V+N LI
Sbjct: 240 ILLFSRMVACDAIKPNEITILAILPAVWNLGDLKMCGSVHAYVGKRGFVPCDIRVTNSLI 299
Query: 406 DMYAKCGSVIHAQRVFDSTEN--PNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPN 463
D YAKCG + A + F N N++SW+++I +A+ G+G EA+++F+ M LG++PN
Sbjct: 300 DAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAFAIHGMGKEAVSMFKDMERLGLKPN 359
Query: 464 EVTYVGVLSACSHIGLVEEGW-NLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETF 522
VT + VL+ACSH GL EE + +NTM E I P +H+ C+VD+L R G L EAE
Sbjct: 360 RVTMISVLNACSHGGLAEEEFLEFFNTMVNEYKITPDVKHYGCLVDMLRRKGRLEEAEKI 419
Query: 523 IRKTGFDPDITTWKTLLSSCKTHGNVDIAERAAENILKLDPSNSAALVLLSSIHASAGNW 582
+ + W+ LL +C + + ++AER +++L+ S+ VL+S+I G +
Sbjct: 420 ALEIPIEEKAVVWRMLLGACSVYDDAELAERVTRKLMELERSHGGDYVLMSNIFCGTGRF 479
Query: 583 EDVAKLRKVLD 593
D + RK +D
Sbjct: 480 LDAQRFRKQMD 490
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 133/267 (49%), Gaps = 5/267 (1%)
Query: 94 VAQNGLISMYTNFGQVAHASDVFTMISIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQ 153
V N +I+ TN G A + + ++SW+++I G+ ++ EA+ LF M+
Sbjct: 190 VTWNVMITGLTNLGDFEKALCFLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVAC 249
Query: 154 GVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVR-NVFSGCSLCDMYAKCGFLP 212
+PNE + ++ A +L + + +H K G V ++ SL D YAKCG +
Sbjct: 250 DAIKPNEITILAILPAVWNLGDLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQ 309
Query: 213 SAKTAFYQIES--PDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCA 270
SA F +I + +LVSW +I+AFA G EA+S+F+ M +GL P+ +T +S+L A
Sbjct: 310 SAFKFFIEIPNGRKNLVSWTTMISAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNA 369
Query: 271 CT-SPMALNQGMQIHSYIV-KVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANL 328
C+ +A + ++ + +V + +V Y L+ M + L +A + I
Sbjct: 370 CSHGGLAEEEFLEFFNTMVNEYKITPDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKA 429
Query: 329 VSWNAILSACLQHKQAGETFRLFKQML 355
V W +L AC + A R+ ++++
Sbjct: 430 VVWRMLLGACSVYDDAELAERVTRKLM 456
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 128/257 (49%), Gaps = 8/257 (3%)
Query: 6 GSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLR-SGFFPDQLTFGSI 64
G + A + M R VVSWT++I GY++ + EA++++ +M+ P+++T +I
Sbjct: 203 GDFEKALCFLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAI 262
Query: 65 IKACCIAGDIYLGRQLHAHVIKSGF-GGHLVAQNGLISMYTNFGQVAHASDVFTMIS--I 121
+ A GD+ + +HA+V K GF + N LI Y G + A F I
Sbjct: 263 LPAVWNLGDLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGR 322
Query: 122 KDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACS--SLLEPEYG 179
K+L+SW++MI F G EA+ +F+DM R G+ +PN + SV +ACS L E E+
Sbjct: 323 KNLVSWTTMISAFAIHGMGKEAVSMFKDMERLGL-KPNRVTMISVLNACSHGGLAEEEFL 381
Query: 180 RQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIE-SPDLVSWNAIIAAFAD 238
+ + ++ + +V L DM + G L A+ +I V W ++ A +
Sbjct: 382 EFFNTMVNEYKITPDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGACSV 441
Query: 239 SGDANEAISIFRQMMHI 255
DA A + R++M +
Sbjct: 442 YDDAELAERVTRKLMEL 458
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 113/269 (42%), Gaps = 36/269 (13%)
Query: 188 KFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGD------ 241
K G +V+ +L MY G + A F ++ + V+WN +I + GD
Sbjct: 151 KLGFESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALC 210
Query: 242 -------------------------ANEAISIFRQMMHIGLI-PDSITFLSLLCACTSPM 275
EAI +F +M+ I P+ IT L++L A +
Sbjct: 211 FLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLG 270
Query: 276 ALNQGMQIHSYIVKVGFNK-EVALYNSLLTMYTKCSNLHDALSVF-EAISKNANLVSWNA 333
L +H+Y+ K GF ++ + NSL+ Y KC + A F E + NLVSW
Sbjct: 271 DLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTT 330
Query: 334 ILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAE--LASLEVGNQVHCFSVK 391
++SA H E +FK M KPN +T+ ++L C+ LA E + +
Sbjct: 331 MISAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNE 390
Query: 392 SGLVLDVSVSNGLIDMYAKCGSVIHAQRV 420
+ DV L+DM + G + A+++
Sbjct: 391 YKITPDVKHYGCLVDMLRRKGRLEEAEKI 419
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 45/73 (61%), Gaps = 2/73 (2%)
Query: 2 YGKCGSMKDARQVFDAMH--LRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQL 59
Y KCG ++ A + F + +N+VSWT+MIS ++ +G G EAV M+ M R G P+++
Sbjct: 302 YAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAFAIHGMGKEAVSMFKDMERLGLKPNRV 361
Query: 60 TFGSIIKACCIAG 72
T S++ AC G
Sbjct: 362 TMISVLNACSHGG 374
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 191 bits (485), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 114/335 (34%), Positives = 176/335 (52%), Gaps = 18/335 (5%)
Query: 277 LNQGMQIHSYIVKVGFNKEVALY-NSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAIL 335
L G +H + K+GF E L +LL Y K +L A VF+ + + + V+WNA++
Sbjct: 127 LRVGRIVHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTS-VTWNAMI 185
Query: 336 SACLQHKQAGETFRLFKQMLF-------SENKPNMITITNLLGTCAELASLEVGNQVHCF 388
HK G +LF S +P T+ +L ++ LE+G+ VH +
Sbjct: 186 GGYCSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGY 245
Query: 389 SVKSGLV--LDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGH 446
K G +DV + L+DMY+KCG + +A VF+ + NV +W+S+ G A++G G+
Sbjct: 246 IEKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGN 305
Query: 447 EALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCM 506
E NL +M G++PNE+T+ +LSA HIGLVEEG L+ +M+ G+ P EH+ C+
Sbjct: 306 ETPNLLNRMAESGIKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCI 365
Query: 507 VDLLARAGCLYEAETFIRKTGFDPDITTWKTLLSSCKTHGNVDIAERAAENIL------- 559
VDLL +AG + EA FI PD ++L ++C +G + E + +L
Sbjct: 366 VDLLGKAGRIQEAYQFILAMPIKPDAILLRSLCNACSIYGETVMGEEIGKALLEIEREDE 425
Query: 560 KLDPSNSAALVLLSSIHASAGNWEDVAKLRKVLDD 594
KL S V LS++ A G W +V KLRK + +
Sbjct: 426 KLSGSECEDYVALSNVLAHKGKWVEVEKLRKEMKE 460
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 129/277 (46%), Gaps = 14/277 (5%)
Query: 74 IYLGRQLHAHVIKSGF--GGHLVAQNGLISMYTNFGQVAHASDVFTMISIKDLISWSSMI 131
+ +GR +H V K GF L+ L+ Y G + +A VF + + ++W++MI
Sbjct: 127 LRVGRIVHGMVKKLGFLYESELIGTT-LLHFYAKNGDLRYARKVFDEMPERTSVTWNAMI 185
Query: 132 RGFTQLGYE-----IEALYLFRDM--LRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHG 184
G+ + +A+ LFR GV +P + + V SA S E G +HG
Sbjct: 186 GGYCSHKDKGNHNARKAMVLFRRFSCCGSGV-RPTDTTMVCVLSAISQTGLLEIGSLVHG 244
Query: 185 ICAKFGLVR--NVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDA 242
K G +VF G +L DMY+KCG L +A + F ++ ++ +W ++ A +G
Sbjct: 245 YIEKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRG 304
Query: 243 NEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQI-HSYIVKVGFNKEVALYNS 301
NE ++ +M G+ P+ ITF SLL A + +G+++ S + G + Y
Sbjct: 305 NETPNLLNRMAESGIKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGC 364
Query: 302 LLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSAC 338
++ + K + +A A+ + + ++ +AC
Sbjct: 365 IVDLLGKAGRIQEAYQFILAMPIKPDAILLRSLCNAC 401
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 117/265 (44%), Gaps = 12/265 (4%)
Query: 2 YGKCGSMKDARQVFDAMHLRNVVSWTSMISGY-SQNGQGNEAVVMYIQMLR------SGF 54
Y K G ++ AR+VFD M R V+W +MI GY S +GN + + R SG
Sbjct: 157 YAKNGDLRYARKVFDEMPERTSVTWNAMIGGYCSHKDKGNHNARKAMVLFRRFSCCGSGV 216
Query: 55 FPDQLTFGSIIKACCIAGDIYLGRQLHAHVIKSGFGGH--LVAQNGLISMYTNFGQVAHA 112
P T ++ A G + +G +H ++ K GF + L+ MY+ G + +A
Sbjct: 217 RPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMYSKCGCLNNA 276
Query: 113 SDVFTMISIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSS 172
VF ++ +K++ +W+SM G G E L M G+ +PNE S+ SA
Sbjct: 277 FSVFELMKVKNVFTWTSMATGLALNGRGNETPNLLNRMAESGI-KPNEITFTSLLSAYRH 335
Query: 173 LLEPEYGRQI-HGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIE-SPDLVSWN 230
+ E G ++ + +FG+ + + D+ K G + A + PD +
Sbjct: 336 IGLVEEGIELFKSMKTRFGVTPVIEHYGCIVDLLGKAGRIQEAYQFILAMPIKPDAILLR 395
Query: 231 AIIAAFADSGDANEAISIFRQMMHI 255
++ A + G+ I + ++ I
Sbjct: 396 SLCNACSIYGETVMGEEIGKALLEI 420
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 79/149 (53%), Gaps = 9/149 (6%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
MY KCG + +A VF+ M ++NV +WTSM +G + NG+GNE + +M SG P+++T
Sbjct: 266 MYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETPNLLNRMAESGIKPNEIT 325
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQN--GLISMYTNFGQVAHASDVFTM 118
F S++ A G + G +L +K+ FG V ++ ++ + G++ A
Sbjct: 326 FTSLLSAYRHIGLVEEGIELFKS-MKTRFGVTPVIEHYGCIVDLLGKAGRIQEAYQFILA 384
Query: 119 ISIK-DLISWSSM-----IRGFTQLGYEI 141
+ IK D I S+ I G T +G EI
Sbjct: 385 MPIKPDAILLRSLCNACSIYGETVMGEEI 413
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 184 bits (468), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 108/400 (27%), Positives = 202/400 (50%), Gaps = 37/400 (9%)
Query: 229 WNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIV 288
+N +I ++ +G+ ++++F M+ + P+++TF SL+ A S +++ G+ +H +
Sbjct: 54 YNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQAL 113
Query: 289 KVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETF 348
K GF + + S + Y + +L + +F+ I N +V+ N++L AC ++ + F
Sbjct: 114 KRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDI-LNPCVVACNSLLDACGRNGEMDYAF 172
Query: 349 RLFKQM--------------------------LFSEN--------KPNMITITNLLGTCA 374
F++M +F E PN T ++L +CA
Sbjct: 173 EYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCA 232
Query: 375 EL--ASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISW 432
+ +G Q+H + + ++L ++ L+DMY K G + A +FD + V +W
Sbjct: 233 NFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAW 292
Query: 433 SSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEE 492
+++I A +G +AL +F M++ V PN +T + +L+AC+ LV+ G L++++
Sbjct: 293 NAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFSSICS 352
Query: 493 ELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTLLSSCKTHGNVDIAE 552
E I P EH+ C+VDL+ RAG L +A FI+ F+PD + LL +CK H N ++
Sbjct: 353 EYKIIPTSEHYGCVVDLIGRAGLLVDAANFIQSLPFEPDASVLGALLGACKIHENTELGN 412
Query: 553 RAAENILKLDPSNSAALVLLSSIHASAGNWEDVAKLRKVL 592
+ ++ L P + V LS+ +A NW + K+RK +
Sbjct: 413 TVGKQLIGLQPQHCGQYVALSTFNALDSNWSEAEKMRKAM 452
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 100/368 (27%), Positives = 172/368 (46%), Gaps = 40/368 (10%)
Query: 26 WTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTFGSIIKACCIAGDIYLGRQLHAHVI 85
+ ++I Y G+ ++ ++ ML S P+ LTF S+IKA C + + G LH +
Sbjct: 54 YNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQAL 113
Query: 86 KSGF-------------------------------GGHLVAQNGLISMYTNFGQVAHASD 114
K GF +VA N L+ G++ +A +
Sbjct: 114 KRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAFE 173
Query: 115 VFTMISIKDLISWSSMIRGFTQLGYEIEALYLFRDMLR--QGVYQPNEFVLGSVFSACSS 172
F + + D++SW+++I GF++ G +AL +F +M++ + V PNE SV S+C++
Sbjct: 174 YFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCAN 233
Query: 173 LLEP--EYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWN 230
+ G+QIHG ++ G +L DMY K G L A T F QI + +WN
Sbjct: 234 FDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAWN 293
Query: 231 AIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIV-- 288
AII+A A +G +A+ +F M + P+ IT L++L AC ++ G+Q+ S I
Sbjct: 294 AIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFSSICSE 353
Query: 289 -KVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGET 347
K+ E Y ++ + + L DA + +++ + A+L AC H+
Sbjct: 354 YKIIPTSE--HYGCVVDLIGRAGLLVDAANFIQSLPFEPDASVLGALLGACKIHENTELG 411
Query: 348 FRLFKQML 355
+ KQ++
Sbjct: 412 NTVGKQLI 419
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 128/264 (48%), Gaps = 10/264 (3%)
Query: 3 GKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQML---RSGFFPDQL 59
G+ G M A + F M + +VVSWT++I+G+S+ G +A++++ +M+ R+ P++
Sbjct: 163 GRNGEMDYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEA 222
Query: 60 TFGSIIKACC--IAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFT 117
TF S++ +C G I LG+Q+H +V+ L+ MY G + A +F
Sbjct: 223 TFVSVLSSCANFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFD 282
Query: 118 MISIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPE 177
I K + +W+++I G +AL +F +M++ PN L ++ +AC+ +
Sbjct: 283 QIRDKKVCAWNAIISALASNGRPKQALEMF-EMMKSSYVHPNGITLLAILTACARSKLVD 341
Query: 178 YGRQI-HGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIE-SPDLVSWNAIIAA 235
G Q+ IC+++ ++ + D+ + G L A + PD A++ A
Sbjct: 342 LGIQLFSSICSEYKIIPTSEHYGCVVDLIGRAGLLVDAANFIQSLPFEPDASVLGALLGA 401
Query: 236 FADSGDANEAISIFRQMMHIGLIP 259
+ ++ +Q+ IGL P
Sbjct: 402 CKIHENTELGNTVGKQL--IGLQP 423
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 48/84 (57%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
MYGK G ++ A +FD + + V +W ++IS + NG+ +A+ M+ M S P+ +T
Sbjct: 267 MYGKAGDLEMALTIFDQIRDKKVCAWNAIISALASNGRPKQALEMFEMMKSSYVHPNGIT 326
Query: 61 FGSIIKACCIAGDIYLGRQLHAHV 84
+I+ AC + + LG QL + +
Sbjct: 327 LLAILTACARSKLVDLGIQLFSSI 350
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 168 bits (426), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 145/605 (23%), Positives = 266/605 (43%), Gaps = 117/605 (19%)
Query: 64 IIKACCIAGDIYLGRQLHAHVIKSGFGGHLV-AQNGLISMYTNFGQVAHASDVFTMISIK 122
++++C L RQ + ++K GF +V N L+ MY+ G++ A ++F + +
Sbjct: 32 LLQSCSSRNRETLWRQTNGLLLKKGFLSSIVIVANHLLQMYSRSGKMGIARNLFDEMPDR 91
Query: 123 DLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQI 182
+ SW++MI G+ G + +L F M + Y N V G
Sbjct: 92 NYFSWNTMIEGYMNSGEKGTSLRFFDMMPERDGYSWNVVVSG------------------ 133
Query: 183 HGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDA 242
+AK G L A+ F + D+V+ N+++ + +G A
Sbjct: 134 ----------------------FAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYA 171
Query: 243 NEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSL 302
EA+ +F+++ D+IT ++L AC AL G QIH+ I+ G + + +SL
Sbjct: 172 EEALRLFKEL---NFSADAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSL 228
Query: 303 LTMYTKCSNLHDALSVFEAISK------------------------------NANLVSWN 332
+ +Y KC +L A + E I + N ++ WN
Sbjct: 229 VNVYAKCGDLRMASYMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWN 288
Query: 333 AILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKS 392
+++S + + E LF +M +E + + T+ ++ C L LE G Q+HC + K
Sbjct: 289 SMISGYIANNMKMEALVLFNEMR-NETREDSRTLAAVINACIGLGFLETGKQMHCHACKF 347
Query: 393 GLVLDVSVSNGLIDMYAKCGSVIH-------------------------------AQRVF 421
GL+ D+ V++ L+DMY+KCGS + A+RVF
Sbjct: 348 GLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVF 407
Query: 422 DSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVE 481
+ EN ++ISW+S+ G++ +G E L F +M L + +EV+ V+SAC+ I +E
Sbjct: 408 ERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLE 467
Query: 482 EGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTLLSS 541
G ++ +G+ + S ++DL + G E + T D W +++S
Sbjct: 468 LGEQVF-ARATIVGLDSDQVVSSSLIDLYCKCG-FVEHGRRVFDTMVKSDEVPWNSMISG 525
Query: 542 CKTHGN----VDIAERAAENILKLDPSNSAALVLLSSIHASAGNWEDVAKLRKVL--DDG 595
T+G +D+ ++ + + + P+ +V+L++ + G E+ KL + + D G
Sbjct: 526 YATNGQGFEAIDLFKKMS--VAGIRPTQITFMVVLTACNY-CGLVEEGRKLFESMKVDHG 582
Query: 596 YDPAQ 600
+ P +
Sbjct: 583 FVPDK 587
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 146/594 (24%), Positives = 243/594 (40%), Gaps = 133/594 (22%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQM----------L 50
MY + G M AR +FD M RN SW +MI GY +G+ ++ + M +
Sbjct: 71 MYSRSGKMGIARNLFDEMPDRNYFSWNTMIEGYMNSGEKGTSLRFFDMMPERDGYSWNVV 130
Query: 51 RSGF---------------FP--DQLTFGSI----------------------------- 64
SGF P D +T S+
Sbjct: 131 VSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKELNFSADAITL 190
Query: 65 ---IKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISI 121
+KAC + G+Q+HA ++ G + L+++Y G + AS + I
Sbjct: 191 TTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIRE 250
Query: 122 KD-------------------------------LISWSSMIRGFTQLGYEIEALYLFRDM 150
D +I W+SMI G+ ++EAL LF +M
Sbjct: 251 PDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEM 310
Query: 151 LRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAK--- 207
+ + + L +V +AC L E G+Q+H KFGL+ ++ +L DMY+K
Sbjct: 311 RNET--REDSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGS 368
Query: 208 ----------------------------CGFLPSAKTAFYQIESPDLVSWNAIIAAFADS 239
CG + AK F +IE+ L+SWN++ F+ +
Sbjct: 369 PMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQN 428
Query: 240 GDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALY 299
G E + F QM + L D ++ S++ AC S +L G Q+ + VG + + +
Sbjct: 429 GCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQVVS 488
Query: 300 NSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSEN 359
+SL+ +Y KC + VF+ + K ++ V WN+++S + Q E LFK+M +
Sbjct: 489 SSLIDLYCKCGFVEHGRRVFDTMVK-SDEVPWNSMISGYATNGQGFEAIDLFKKMSVAGI 547
Query: 360 KPNMITITNLLGTCAELASLEVGNQV-HCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQ 418
+P IT +L C +E G ++ V G V D + ++D+ A+ G V A
Sbjct: 548 RPTQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAI 607
Query: 419 RVFDSTENPNVIS---WSSLIVGYAMSGLGHEALNLFRKMRNLGVRP-NEVTYV 468
+ + E P + WSS++ G + G++A+ + + + P N V YV
Sbjct: 608 NLVE--EMPFDVDGSMWSSILRGCVAN--GYKAMGKKAAEKIIELEPENSVAYV 657
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 72/221 (32%), Positives = 129/221 (58%), Gaps = 3/221 (1%)
Query: 349 RLFK---QMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLI 405
RL+K ++L P+ L +CA L SLE +VH ++S D ++N +I
Sbjct: 219 RLYKDAIELLDKGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVI 278
Query: 406 DMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEV 465
M+ +C S+ A+RVFD + ++ SW ++ Y+ +G+G +AL+LF +M G++PNE
Sbjct: 279 SMFGECSSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEE 338
Query: 466 TYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRK 525
T++ V AC+ +G +EE + +++M+ E GI P EH+ ++ +L + G L EAE +IR
Sbjct: 339 TFLTVFLACATVGGIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRD 398
Query: 526 TGFDPDITTWKTLLSSCKTHGNVDIAERAAENILKLDPSNS 566
F+P W+ + + + HG++D+ + E ++ +DPS +
Sbjct: 399 LPFEPTADFWEAMRNYARLHGDIDLEDYMEELMVDVDPSKA 439
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 88/194 (45%), Gaps = 15/194 (7%)
Query: 47 IQMLRSGFFPDQLTFGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNF 106
I++L G PD+ F + ++C + +++H H ++S F G N +ISM+
Sbjct: 225 IELLDKGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGEC 284
Query: 107 GQVAHASDVFTMISIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSV 166
+ A VF + KD+ SW M+ ++ G +AL+LF +M + G+ +PNE +V
Sbjct: 285 SSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGL-KPNEETFLTV 343
Query: 167 FSACSSL-------LEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFY 219
F AC+++ L + + HGI K V + KCG L A+
Sbjct: 344 FLACATVGGIEEAFLHFDSMKNEHGISPKTEHYLGVLG------VLGKCGHLVEAEQYIR 397
Query: 220 QIE-SPDLVSWNAI 232
+ P W A+
Sbjct: 398 DLPFEPTADFWEAM 411
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 92/188 (48%), Gaps = 5/188 (2%)
Query: 251 QMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCS 310
+++ G +PD F+ L +C + +L ++H + ++ F + L N +++M+ +CS
Sbjct: 226 ELLDKGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECS 285
Query: 311 NLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLL 370
++ DA VF+ + + ++ SW+ ++ A + + LF++M KPN T +
Sbjct: 286 SITDAKRVFDHMV-DKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVF 344
Query: 371 GTCAELASLEVGNQVHCFSVKS--GLVLDVSVSNGLIDMYAKCGSVIHA-QRVFDSTENP 427
CA + +E +H S+K+ G+ G++ + KCG ++ A Q + D P
Sbjct: 345 LACATVGGIEEAF-LHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRDLPFEP 403
Query: 428 NVISWSSL 435
W ++
Sbjct: 404 TADFWEAM 411
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 74/144 (51%), Gaps = 3/144 (2%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
M+G+C S+ DA++VFD M +++ SW M+ YS NG G++A+ ++ +M + G P++ T
Sbjct: 280 MFGECSSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEET 339
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQN--GLISMYTNFGQVAHASDVFTM 118
F ++ AC G I LH +K+ G ++ G++ + G + A
Sbjct: 340 FLTVFLACATVGGIEEAF-LHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRD 398
Query: 119 ISIKDLISWSSMIRGFTQLGYEIE 142
+ + + +R + +L +I+
Sbjct: 399 LPFEPTADFWEAMRNYARLHGDID 422
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 94/201 (46%), Gaps = 7/201 (3%)
Query: 146 LFRD---MLRQGVYQPNE-FVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFSGCSL 201
L++D +L +G E FVL +F +C++L E+ +++H + + +
Sbjct: 220 LYKDAIELLDKGAMPDRECFVL--LFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMV 277
Query: 202 CDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDS 261
M+ +C + AK F + D+ SW+ ++ A++D+G ++A+ +F +M GL P+
Sbjct: 278 ISMFGECSSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNE 337
Query: 262 ITFLSLLCACTSPMALNQG-MQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFE 320
TFL++ AC + + + + S + G + + Y +L + KC +L +A
Sbjct: 338 ETFLTVFLACATVGGIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIR 397
Query: 321 AISKNANLVSWNAILSACLQH 341
+ W A+ + H
Sbjct: 398 DLPFEPTADFWEAMRNYARLH 418
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 130/607 (21%), Positives = 251/607 (41%), Gaps = 42/607 (6%)
Query: 4 KCGSMKDARQVFDAMHLRNVV----SWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQL 59
K G M+ A+ +FD M ++ ++ S+I GY + + + ++M +
Sbjct: 359 KEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPY 418
Query: 60 TFGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMI 119
T+G+++K C +GD+ + +I SG ++V LI + + A V +
Sbjct: 419 TYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEM 478
Query: 120 SIK----DLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLE 175
+ D+ ++S+I G ++ EA +M+ G+ +PN F G+ S E
Sbjct: 479 KEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGL-KPNAFTYGAFISGYIEASE 537
Query: 176 PEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESP----DLVSWNA 231
+ + G++ N L + Y K G + A +A+ + D ++
Sbjct: 538 FASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTV 597
Query: 232 IIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVG 291
++ + ++A IFR+M G+ PD ++ L+ + + + I +V+ G
Sbjct: 598 LMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEG 657
Query: 292 FNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNA---NLVSWNAILSACLQHKQAGETF 348
V +YN LL + + + A + + +S N V++ I+ + E F
Sbjct: 658 LTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAF 717
Query: 349 RLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSV-KSGLVLDVSVSNGLIDM 407
RLF +M P+ T L+ C L +E + F K G + N LI+
Sbjct: 718 RLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVE--RAITIFGTNKKGCASSTAPFNALINW 775
Query: 408 YAKCGSVIHAQRV--------FDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLG 459
K G V FD PN ++++ +I G A LF +M+N
Sbjct: 776 VFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNAN 835
Query: 460 VRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEEL--GIPPAREHFSCMVDLLARAGCLY 517
+ P +TY +L+ +G E ++ +E + GI P +S +++ + G
Sbjct: 836 LMPTVITYTSLLNGYDKMGRRAE---MFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTT 892
Query: 518 EAETFIRK--------TGFDPDITTWKTLLSSCKTHGNVDIAERAAENILKLD--PSNSA 567
+A + + G I+T + LLS G +++AE+ EN+++L P ++
Sbjct: 893 KALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSAT 952
Query: 568 ALVLLSS 574
+ L++
Sbjct: 953 VIELINE 959
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/394 (20%), Positives = 173/394 (43%), Gaps = 28/394 (7%)
Query: 2 YGKCGSMKDA----RQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPD 57
Y K G + +A R + D L + ++T +++G +N + ++A ++ +M G PD
Sbjct: 567 YCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPD 626
Query: 58 QLTFGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFT 117
++G +I G++ + +++ G +++ N L+ + G++ A ++
Sbjct: 627 VFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLD 686
Query: 118 MISIKDL----ISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSL 173
+S+K L +++ ++I G+ + G EA LF +M +G+ P+ FV ++ C L
Sbjct: 687 EMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLV-PDSFVYTTLVDGCCRL 745
Query: 174 LEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKT---------AFYQIESP 224
+ E I G K G + +L + K G KT +F + P
Sbjct: 746 NDVERAITIFGTNKK-GCASSTAPFNALINWVFKFG-KTELKTEVLNRLMDGSFDRFGKP 803
Query: 225 DLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIH 284
+ V++N +I G+ A +F QM + L+P IT+ SLL + +
Sbjct: 804 NDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVF 863
Query: 285 SYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAI-SKNA-------NLVSWNAILS 336
+ G + +Y+ ++ + K AL + + + +KNA ++ + A+LS
Sbjct: 864 DEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLS 923
Query: 337 ACLQHKQAGETFRLFKQMLFSENKPNMITITNLL 370
+ + ++ + M+ + P+ T+ L+
Sbjct: 924 GFAKVGEMEVAEKVMENMVRLQYIPDSATVIELI 957
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 71/370 (19%), Positives = 161/370 (43%), Gaps = 50/370 (13%)
Query: 229 WNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQI----- 283
++ I + G +A ++F M+ GLIP + + SL+ + QG ++
Sbjct: 350 YDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMK 409
Query: 284 --------HSY----------------------IVKVGFNKEVALYNSLLTMYTKCSNLH 313
++Y ++ G V +Y +L+ + + S
Sbjct: 410 KRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFG 469
Query: 314 DALSVFEAISKNA---NLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLL 370
DA+ V + + + ++ +N+++ + K+ E +M+ + KPN T +
Sbjct: 470 DAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFI 529
Query: 371 GTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVI 430
E + ++ + G++ + + GLI+ Y K G VI A + S + ++
Sbjct: 530 SGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGIL 589
Query: 431 ----SWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNL 486
+++ L+ G + +A +FR+MR G+ P+ +Y +++ S +G +++ ++
Sbjct: 590 GDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSI 649
Query: 487 YNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRK---TGFDPDITTWKTLLSS-C 542
++ M EE G+ P ++ ++ R+G + +A+ + + G P+ T+ T++ C
Sbjct: 650 FDEMVEE-GLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYC 708
Query: 543 KTHGNVDIAE 552
K+ D+AE
Sbjct: 709 KSG---DLAE 715
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 111/496 (22%), Positives = 226/496 (45%), Gaps = 67/496 (13%)
Query: 2 YGKCGSMKDARQVFDAMHLR----NVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPD 57
Y K + D ++ +M L+ N++S+ +I+G + G+ E + +M R G+ D
Sbjct: 250 YCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLD 309
Query: 58 QLTFGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFT 117
++T+ ++IK C G+ + +HA +++ G ++ LI G + A +
Sbjct: 310 EVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLD 369
Query: 118 MISIKDLI----SWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSL 173
+ ++ L ++++++ GF+Q GY EA + R+M G + P SV +
Sbjct: 370 QMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNG-FSP------SVVT----- 417
Query: 174 LEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAII 233
Y I+G C G + + + L DM K G SPD+VS++ ++
Sbjct: 418 ----YNALINGHCVT-GKMEDAIA--VLEDMKEK-GL------------SPDVVSYSTVL 457
Query: 234 AAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFN 293
+ F S D +EA+ + R+M+ G+ PD+IT+ SL+ + ++ +++VG
Sbjct: 458 SGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLP 517
Query: 294 KEVALYNSLLTMYTKCSNLHDALSVF-EAISKNA--NLVSWNAILSACLQHKQAGETFRL 350
+ Y +L+ Y +L AL + E + K ++V+++ +++ + + E RL
Sbjct: 518 PDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRL 577
Query: 351 FKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAK 410
++ + E+ P+ +T L+ C+ + V + + F +K
Sbjct: 578 LLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMK------------------- 618
Query: 411 CGSVIHAQRVFDS----TENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVT 466
G + A +VF+S P+ +++ +I G+ +G +A L+++M G + VT
Sbjct: 619 -GMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVT 677
Query: 467 YVGVLSACSHIGLVEE 482
+ ++ A G V E
Sbjct: 678 VIALVKALHKEGKVNE 693
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 131/588 (22%), Positives = 253/588 (43%), Gaps = 70/588 (11%)
Query: 45 MYIQMLRSGFFPDQLTFGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYT 104
++ +ML S P+ T+ +I+ C AG+I + L + G ++V N LI Y
Sbjct: 192 VFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYC 251
Query: 105 NFGQVAHASDVFTMISIK----DLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNE 160
++ + +++K +LIS++ +I G + G E ++ +M R+G
Sbjct: 252 KLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGY----- 306
Query: 161 FVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQ 220
SL E Y I G C + N + + G PS
Sbjct: 307 -----------SLDEVTYNTLIKGYCKE----GNFHQALVMHAEMLRHGLTPS------- 344
Query: 221 IESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQG 280
++++ ++I + +G+ N A+ QM GL P+ T+ +L+ + +N+
Sbjct: 345 -----VITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEA 399
Query: 281 MQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISK---NANLVSWNAILSA 337
++ + GF+ V YN+L+ + + DA++V E + + + ++VS++ +LS
Sbjct: 400 YRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSG 459
Query: 338 CLQHKQAGETFRLFKQMLFSENKPNMITITNLL-GTCAELASLEVGNQVHCFSVKSGLVL 396
+ E R+ ++M+ KP+ IT ++L+ G C + + E + ++ ++ GL
Sbjct: 460 FCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACD-LYEEMLRVGLPP 518
Query: 397 DVSVSNGLIDMYAKCGSVIHAQRVFDSTEN----PNVISWSSLIVGYAMSGLGHEALNLF 452
D LI+ Y G + A ++ + P+V+++S LI G EA L
Sbjct: 519 DEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLL 578
Query: 453 RKMRNLGVRPNEVTYVGVLSACSHI---------------GLVEEGWNLYNTMEEELGI- 496
K+ P++VTY ++ CS+I G++ E ++ +M LG
Sbjct: 579 LKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESM---LGKN 635
Query: 497 -PPAREHFSCMVDLLARAGCLYEAETFIR---KTGFDPDITTWKTLLSSCKTHGNVDIAE 552
P ++ M+ RAG + +A T + K+GF T L+ + G V+
Sbjct: 636 HKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELN 695
Query: 553 RAAENILK-LDPSNSAALVLLSSIHASAGNWEDVAK-LRKVLDDGYDP 598
++L+ + S + +L I+ GN + V L ++ DG+ P
Sbjct: 696 SVIVHVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDGFLP 743
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/346 (22%), Positives = 167/346 (48%), Gaps = 18/346 (5%)
Query: 229 WNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCAC-TSPMALNQGMQIHSYI 287
++ ++ +++ ++A+SI G +P +++ ++L A S ++ + +
Sbjct: 137 FDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEM 196
Query: 288 VKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNA---NLVSWNAILSACLQHKQA 344
++ + V YN L+ + N+ AL++F+ + N+V++N ++ + ++
Sbjct: 197 LESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKI 256
Query: 345 GETFRLFKQMLFSENKPNMITITNLL-GTCAELASLEVGNQVHCFSVKSGLVLDVSVSNG 403
+ F+L + M +PN+I+ ++ G C E EV + + + G LD N
Sbjct: 257 DDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMN-RRGYSLDEVTYNT 315
Query: 404 LIDMYAKCGS-----VIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNL 458
LI Y K G+ V+HA+ + P+VI+++SLI +G + A+ +MR
Sbjct: 316 LIKGYCKEGNFHQALVMHAE-MLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVR 374
Query: 459 GVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYE 518
G+ PNE TY ++ S G + E + + M + G P+ ++ +++ G + +
Sbjct: 375 GLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDN-GFSPSVVTYNALINGHCVTGKMED 433
Query: 519 AETFI---RKTGFDPDITTWKTLLSS-CKTHGNVDIAERAAENILK 560
A + ++ G PD+ ++ T+LS C+++ +VD A R +++
Sbjct: 434 AIAVLEDMKEKGLSPDVVSYSTVLSGFCRSY-DVDEALRVKREMVE 478
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/349 (22%), Positives = 147/349 (42%), Gaps = 66/349 (18%)
Query: 4 KCGSMKDARQVFDAMHLR----NVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQL 59
K G+M A + D M +R N ++T+++ G+SQ G NEA + +M +GF P +
Sbjct: 357 KAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVV 416
Query: 60 TFGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMI 119
T+ ++I C+ G + + + + G +V+ + ++S + V A V +
Sbjct: 417 TYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREM 476
Query: 120 SIK----DLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLE 175
K D I++SS+I+GF + EA L+ +MLR G+ P+EF ++ +A +
Sbjct: 477 VEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGL-PPDEFTYTALINAYCMEGD 535
Query: 176 PEYGRQIHGICAKFGLVRNVF--------------------------------------- 196
E Q+H + G++ +V
Sbjct: 536 LEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHT 595
Query: 197 -----------SGCSLCDMYAKCGFLPSAKTAFYQI----ESPDLVSWNAIIAAFADSGD 241
S SL + G + A F + PD ++N +I +GD
Sbjct: 596 LIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGD 655
Query: 242 ANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKV 290
+A +++++M+ G + ++T ++L+ A +N +++S IV V
Sbjct: 656 IRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVN---ELNSVIVHV 701
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 131/651 (20%), Positives = 268/651 (41%), Gaps = 76/651 (11%)
Query: 1 MYGKCGSMKDARQVFDAMHLR----NVVSWTSMISGYSQNGQGNEAVVMYIQMLRSG--- 53
M GK G + A +F+ + +V S+TS+IS ++ +G+ EAV ++ +M G
Sbjct: 182 MLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKP 241
Query: 54 ---------------------------------FFPDQLTFGSIIKACCIAGDIYL-GRQ 79
PD T+ ++I CC G ++ Q
Sbjct: 242 TLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLI-TCCKRGSLHQEAAQ 300
Query: 80 LHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIK----DLISWSSMIRGFT 135
+ + +GF V N L+ +Y + A V + + +++++S+I +
Sbjct: 301 VFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYA 360
Query: 136 QLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNV 195
+ G EA+ L M +G +P+ F ++ S + E I G N+
Sbjct: 361 RDGMLDEAMELKNQMAEKGT-KPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNI 419
Query: 196 FSGCSLCDMYAKCGFLPSAKTAFYQIE----SPDLVSWNAIIAAFADSGDANEAISIFRQ 251
+ + MY G F +I SPD+V+WN ++A F +G +E +F++
Sbjct: 420 CTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKE 479
Query: 252 MMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSN 311
M G +P+ TF +L+ A + + Q M ++ ++ G +++ YN++L +
Sbjct: 480 MKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGM 539
Query: 312 LHDALSVFEAISK---NANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITN 368
+ V + N +++ ++L A K+ G L +++ +P + +
Sbjct: 540 WEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKT 599
Query: 369 LLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTEN-- 426
L+ C++ L + + G D++ N ++ +Y + V A V D +
Sbjct: 600 LVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERG 659
Query: 427 --PNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGW 484
P++ +++SL+ ++ S ++ + R++ G++P+ ++Y V+ A + +
Sbjct: 660 FTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDAS 719
Query: 485 NLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIR---KTGFDPDITTWKTLLSS 541
+++ M GI P ++ + A EA +R K G P+ T+ +++
Sbjct: 720 RIFSEMRNS-GIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDG 778
Query: 542 CKTHGNVDIAERAAENILKLDPSNSAALVLLSSIHASAGNWEDVAKLRKVL 592
D A+ E++ LDP HA G ED+ L +++
Sbjct: 779 YCKLNRKDEAKLFVEDLRNLDP------------HAPKG--EDLRLLERIV 815
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/370 (22%), Positives = 160/370 (43%), Gaps = 48/370 (12%)
Query: 201 LCDMYAKCGFLPSAKTAFYQIE----SPDLVSWNAIIAAFADSGDANEAISIFRQMMH-- 254
+ M K G + SA F ++ S D+ S+ ++I+AFA+SG EA+++F++M
Sbjct: 179 IISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDG 238
Query: 255 ----------------------------------IGLIPDSITFLSLLCACTSPMALNQG 280
G+ PD+ T+ +L+ C +
Sbjct: 239 CKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEA 298
Query: 281 MQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNA---NLVSWNAILSA 337
Q+ + GF+ + YN+LL +Y K +A+ V + N ++V++N+++SA
Sbjct: 299 AQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISA 358
Query: 338 CLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLD 397
+ E L QM KP++ T T LL +E + +G +
Sbjct: 359 YARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPN 418
Query: 398 VSVSNGLIDMYAKCGSVIHAQRVFDSTE----NPNVISWSSLIVGYAMSGLGHEALNLFR 453
+ N I MY G ++FD +P++++W++L+ + +G+ E +F+
Sbjct: 419 ICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFK 478
Query: 454 KMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARA 513
+M+ G P T+ ++SA S G E+ +Y M + G+ P ++ ++ LAR
Sbjct: 479 EMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRM-LDAGVTPDLSTYNTVLAALARG 537
Query: 514 GCLYEAETFI 523
G ++E +
Sbjct: 538 GMWEQSEKVL 547
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 82/347 (23%), Positives = 141/347 (40%), Gaps = 53/347 (15%)
Query: 302 LLTMYTKCSNLHDALSVFEAISKNA---NLVSWNAILSACLQHKQAGETFRLFKQMLFSE 358
+++M K + A ++F + ++ ++ S+ +++SA + E +FK+M
Sbjct: 179 IISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDG 238
Query: 359 NKPNMIT---ITNLLG--------------------------------TCAELASL-EVG 382
KP +IT I N+ G TC + SL +
Sbjct: 239 CKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEA 298
Query: 383 NQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTE----NPNVISWSSLIVG 438
QV +G D N L+D+Y K A +V + +P++++++SLI
Sbjct: 299 AQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISA 358
Query: 439 YAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPP 498
YA G+ EA+ L +M G +P+ TY +LS G VE +++ M G P
Sbjct: 359 YARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEM-RNAGCKP 417
Query: 499 AREHFSCMVDLLARAGCLYEAETF---IRKTGFDPDITTWKTLLSSCKTHGNVDIAERAA 555
F+ + + G E I G PDI TW TLL+ +G +D
Sbjct: 418 NICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNG-MDSEVSGV 476
Query: 556 ENILK---LDPSNSAALVLLSSIHASAGNWEDVAKL-RKVLDDGYDP 598
+K P L+S+ ++ G++E + R++LD G P
Sbjct: 477 FKEMKRAGFVPERETFNTLISA-YSRCGSFEQAMTVYRRMLDAGVTP 522
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 79/156 (50%), Gaps = 15/156 (9%)
Query: 395 VLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENP----NVISWSSLIVGYAMSGLGHEALN 450
+LD SV +I M K G V A +F+ + +V S++SLI +A SG EA+N
Sbjct: 170 MLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVN 229
Query: 451 LFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEEL---GIPPAREHFSCMV 507
+F+KM G +P +TY +L+ +G WN ++ E++ GI P ++ ++
Sbjct: 230 VFKKMEEDGCKPTLITYNVILNVFGKMGT---PWNKITSLVEKMKSDGIAPDAYTYNTLI 286
Query: 508 DLLARAGCLYE--AETF--IRKTGFDPDITTWKTLL 539
R G L++ A+ F ++ GF D T+ LL
Sbjct: 287 TCCKR-GSLHQEAAQVFEEMKAAGFSYDKVTYNALL 321
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 129 bits (323), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 121/542 (22%), Positives = 226/542 (41%), Gaps = 85/542 (15%)
Query: 22 NVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTFGSIIKACCIAGDIYLGRQLH 81
N V + ++I S+ + NEA+ + +M G PD TF +I C I ++
Sbjct: 251 NSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMV 310
Query: 82 AHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIKDLISWSSMIRGFTQLGYEI 141
++ GF + L++ G+V A D+F I +++ ++++I GF G
Sbjct: 311 NRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLD 370
Query: 142 EALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFSGCSL 201
+A + DM+ +G+V +V + SL
Sbjct: 371 DAKAVLSDMV-----------------------------------TSYGIVPDVCTYNSL 395
Query: 202 CDMYAKCGFLPSAKTAFYQIES----PDLVSWNAIIAAFADSGDANEAISIFRQMMHIGL 257
Y K G + A + + + P++ S+ ++ F G +EA ++ +M GL
Sbjct: 396 IYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGL 455
Query: 258 IPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALS 317
P+++ F L+ A + + ++I + + G +V +NSL++ + + AL
Sbjct: 456 KPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALW 515
Query: 318 VF-EAISKN--ANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCA 374
+ + IS+ AN V++N +++A L+ + E +L +M+F
Sbjct: 516 LLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQ----------------- 558
Query: 375 ELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDST----ENPNVI 430
G LD N LI + G V A+ +F+ P+ I
Sbjct: 559 ------------------GSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNI 600
Query: 431 SWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTM 490
S + LI G SG+ EA+ ++M G P+ VT+ +++ G +E+G ++ +
Sbjct: 601 SCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKL 660
Query: 491 EEELGIPPAREHFSCMVDLLARAGCLYEAETFIR---KTGFDPDITTWKTLLSSCKTHGN 547
+ E GIPP F+ ++ L + G +Y+A + + GF P+ TW LL S
Sbjct: 661 QAE-GIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQET 719
Query: 548 VD 549
+D
Sbjct: 720 LD 721
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/354 (22%), Positives = 152/354 (42%), Gaps = 25/354 (7%)
Query: 205 YAKCGFLPSAKTAF-------YQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGL 257
Y K GF P T Y E P S+N ++ A ++F M+ +
Sbjct: 156 YDKAGF-PGQTTRLMLEMRNVYSCE-PTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKI 213
Query: 258 IPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALS 317
P TF ++ A + ++ + + + K G +Y +L+ +KC+ +++AL
Sbjct: 214 PPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQ 273
Query: 318 VFEAI---SKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCA 374
+ E + + ++N ++ + + E ++ +ML P+ IT L+
Sbjct: 274 LLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLC 333
Query: 375 ELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTEN-----PNV 429
++ ++ + K +V + N LI + G + A+ V P+V
Sbjct: 334 KIGRVDAAKDLFYRIPKPEIV----IFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDV 389
Query: 430 ISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNT 489
+++SLI GY GL AL + MRN G +PN +Y ++ +G ++E +N+ N
Sbjct: 390 CTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNE 449
Query: 490 MEEELGIPPAREHFSCMVDLLARAGCLYEAETFIR---KTGFDPDITTWKTLLS 540
M + G+ P F+C++ + + EA R + G PD+ T+ +L+S
Sbjct: 450 MSAD-GLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLIS 502
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 121/566 (21%), Positives = 252/566 (44%), Gaps = 64/566 (11%)
Query: 14 VFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTFGSIIKACCIAGD 73
V D NVV++ ++I+G+ + G+ + A ++ M + G PD + + ++I AG
Sbjct: 277 VLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGM 336
Query: 74 IYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIK----DLISWSS 129
+ +G +L + + G +V + I +Y G +A AS V+ + + ++++++
Sbjct: 337 LGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTI 396
Query: 130 MIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSV---FSACSSL------------- 173
+I+G Q G EA ++ +L++G+ +P+ S+ F C +L
Sbjct: 397 LIKGLCQDGRIYEAFGMYGQILKRGM-EPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKM 455
Query: 174 -LEPE---YGRQIHGICAKFGLV----------------RNVFSGCSLCDMYAKCGFLPS 213
P+ YG + G+ +K GL+ NV SL D + +
Sbjct: 456 GYPPDVVIYGVLVDGL-SKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDE 514
Query: 214 AKTAF-----YQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLL 268
A F Y I+ PD+ ++ ++ G EA+ +F +M +GL PD++ + +L+
Sbjct: 515 ALKVFRLMGIYGIK-PDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLI 573
Query: 269 CACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISK---N 325
A M G+Q+ + + + ++A+ N ++ + KC + DA F + +
Sbjct: 574 DAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKME 633
Query: 326 ANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQV 385
++V++N ++ ++ E R+F+ + + PN +T+T L+ + ++ ++
Sbjct: 634 PDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRM 693
Query: 386 HCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTE----NPNVISWSSLIVGYAM 441
+ G + L+D ++K + + ++F+ + +P+++S+S +I G
Sbjct: 694 FSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCK 753
Query: 442 SGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPARE 501
G EA N+F + + + P+ V Y ++ +G + E LY M G+ P
Sbjct: 754 RGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRN-GVKPD-- 810
Query: 502 HFSCMVDLLARAGCLYEAETFIRKTG 527
DLL RA Y ++ G
Sbjct: 811 ------DLLQRALSEYNPPKWLMSKG 830
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 111/525 (21%), Positives = 224/525 (42%), Gaps = 69/525 (13%)
Query: 2 YGKCGSMKDARQVFDAMHLR----NVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPD 57
+ K G M A +F M R ++++++++I GY + G ++ Q L G D
Sbjct: 296 FCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLD 355
Query: 58 QLTFGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFT 117
+ F S I +GD+ ++ ++ G ++V LI G++ A ++
Sbjct: 356 VVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYG 415
Query: 118 MISIK----DLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSS- 172
I + ++++SS+I GF + G L+ DM++ G Y P+ + G + S
Sbjct: 416 QILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMG-YPPDVVIYGVLVDGLSKQ 474
Query: 173 ---LLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAF-----YQIESP 224
L + ++ G + +V VF+ SL D + + A F Y I+ P
Sbjct: 475 GLMLHAMRFSVKMLGQSIRLNVV--VFN--SLIDGWCRLNRFDEALKVFRLMGIYGIK-P 529
Query: 225 DLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIH 284
D+ ++ ++ G EA+ +F +M +GL PD++ + +L+ A M G+Q+
Sbjct: 530 DVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLF 589
Query: 285 SYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISK---NANLVSWNAILSACLQH 341
+ + + ++A+ N ++ + KC + DA F + + ++V++N ++
Sbjct: 590 DLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSL 649
Query: 342 KQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSV----------- 390
++ E R+F+ + + PN +T+T L+ + ++ + FS+
Sbjct: 650 RRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMD--GAIRMFSIMAEKGSKPNAV 707
Query: 391 --------------------------KSGLVLDVSVSNGLIDMYAKCGSVIHAQRVF--- 421
+ G+ + + +ID K G V A +F
Sbjct: 708 TYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQA 767
Query: 422 -DSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEV 465
D+ P+V++++ LI GY G EA L+ M GV+P+++
Sbjct: 768 IDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDL 812
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 92/404 (22%), Positives = 179/404 (44%), Gaps = 47/404 (11%)
Query: 223 SPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQ 282
+P++V++ +I F G+ + A +F+ M G+ PD I + +L+ L G +
Sbjct: 283 APNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHK 342
Query: 283 IHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAI---SKNANLVSWNAILSACL 339
+ S + G +V +++S + +Y K +L A V++ + + N+V++ ++
Sbjct: 343 LFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLC 402
Query: 340 QHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVS 399
Q + E F ++ Q+L +P+++T ++L+ + +L G ++ +K G DV
Sbjct: 403 QDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVV 462
Query: 400 VSNGLIDMYAKCGSVIHAQR----VFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKM 455
+ L+D +K G ++HA R + + NV+ ++SLI G+ EAL +FR M
Sbjct: 463 IYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLM 522
Query: 456 RNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVD------- 508
G++P+ T+ V+ G +EE L+ M + +G+ P + ++D
Sbjct: 523 GIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFK-MGLEPDALAYCTLIDAFCKHMK 581
Query: 509 ----------------------------LLARAGCLYEAETFIR---KTGFDPDITTWKT 537
LL + + +A F + +PDI T+ T
Sbjct: 582 PTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNT 641
Query: 538 LLSSCKTHGNVDIAERAAENILKLDPSNSAALVLLSSIHASAGN 581
++ + +D AER E +LK+ P + L IH N
Sbjct: 642 MICGYCSLRRLDEAERIFE-LLKVTPFGPNTVTLTILIHVLCKN 684
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 99/234 (42%), Gaps = 41/234 (17%)
Query: 328 LVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLL-GTCA------------ 374
+VS N +L L Q RL +L PN++T L+ G C
Sbjct: 252 IVSCNKVLKG-LSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFK 310
Query: 375 ----------------------ELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCG 412
+ L +G+++ ++ G+ LDV V + ID+Y K G
Sbjct: 311 VMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSG 370
Query: 413 SVIHA----QRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYV 468
+ A +R+ +PNV++++ LI G G +EA ++ ++ G+ P+ VTY
Sbjct: 371 DLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYS 430
Query: 469 GVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETF 522
++ G + G+ LY M ++G PP + +VD L++ G + A F
Sbjct: 431 SLIDGFCKCGNLRSGFALYEDM-IKMGYPPDVVIYGVLVDGLSKQGLMLHAMRF 483
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 110/465 (23%), Positives = 207/465 (44%), Gaps = 47/465 (10%)
Query: 22 NVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTFGSIIKACCIAGDIYLGRQLH 81
++V+ +S+++GY + ++AV + QM+ G+ PD +TF ++I + L
Sbjct: 154 SIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALV 213
Query: 82 AHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIK----DLISWSSMIRGFTQL 137
+++ G +LV +++ G A ++ + D++ ++++I +
Sbjct: 214 DRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKY 273
Query: 138 GYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFS 197
+ +AL LF++M +G+ +PN S+ S S YGR +S
Sbjct: 274 RHVDDALNLFKEMETKGI-RPNVVTYSSLISCLCS-----YGR---------------WS 312
Query: 198 GCS--LCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHI 255
S L DM K +I +P+LV++NA+I AF G EA ++ M+
Sbjct: 313 DASQLLSDMIEK------------KI-NPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKR 359
Query: 256 GLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDA 315
+ PD T+ SL+ L++ Q+ ++V +V YN+L+ + K + D
Sbjct: 360 SIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDG 419
Query: 316 LSVFEAISKNA---NLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGT 372
+F +S + V++ ++ ++FKQM+ P+++T + LL
Sbjct: 420 TELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDG 479
Query: 373 CAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTE----NPN 428
LE +V + KS + LD+ + +I+ K G V +F S PN
Sbjct: 480 LCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPN 539
Query: 429 VISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSA 473
V++++++I G L EA L +KM+ G PN TY ++ A
Sbjct: 540 VVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRA 584
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 79/375 (21%), Positives = 170/375 (45%), Gaps = 13/375 (3%)
Query: 13 QVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTFGSIIKACCIAG 72
Q+ + + + +++T++I G + + +EAV + +M++ G P+ +T+G ++ C G
Sbjct: 180 QMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRG 239
Query: 73 DIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIK----DLISWS 128
D L L + + +V N +I + V A ++F + K +++++S
Sbjct: 240 DTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYS 299
Query: 129 SMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAK 188
S+I G +A L DM+ + + PN ++ A + +++ K
Sbjct: 300 SLISCLCSYGRWSDASQLLSDMIEKKI-NPNLVTFNALIDAFVKEGKFVEAEKLYDDMIK 358
Query: 189 FGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIES----PDLVSWNAIIAAFADSGDANE 244
+ ++F+ SL + + L AK F + S PD+V++N +I F S +
Sbjct: 359 RSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVED 418
Query: 245 AISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLT 304
+FR+M H GL+ D++T+ +L+ + ++ +V G ++ Y+ LL
Sbjct: 419 GTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLD 478
Query: 305 MYTKCSNLHDALSVFEAISKNA---NLVSWNAILSACLQHKQAGETFRLFKQMLFSENKP 361
L AL VF+ + K+ ++ + ++ + + + + LF + KP
Sbjct: 479 GLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKP 538
Query: 362 NMITITNLL-GTCAE 375
N++T ++ G C++
Sbjct: 539 NVVTYNTMISGLCSK 553
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/339 (20%), Positives = 158/339 (46%), Gaps = 11/339 (3%)
Query: 223 SPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQ 282
P +V+ ++++ + ++A+++ QM+ +G PD+ITF +L+ ++ +
Sbjct: 152 EPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVA 211
Query: 283 IHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVF---EAISKNANLVSWNAILSACL 339
+ +V+ G + Y ++ K + AL++ EA A++V +N I+ +
Sbjct: 212 LVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLC 271
Query: 340 QHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVS 399
+++ + LFK+M +PN++T ++L+ +Q+ ++ + ++
Sbjct: 272 KYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLV 331
Query: 400 VSNGLIDMYAKCGSVIHAQRVFDS----TENPNVISWSSLIVGYAMSGLGHEALNLFRKM 455
N LID + K G + A++++D + +P++ +++SL+ G+ M +A +F M
Sbjct: 332 TFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFM 391
Query: 456 RNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGC 515
+ P+ VTY ++ VE+G L+ M G+ ++ ++ L G
Sbjct: 392 VSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHR-GLVGDTVTYTTLIQGLFHDGD 450
Query: 516 LYEAETFIRK---TGFDPDITTWKTLLSSCKTHGNVDIA 551
A+ ++ G PDI T+ LL +G ++ A
Sbjct: 451 CDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKA 489
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/311 (18%), Positives = 132/311 (42%), Gaps = 13/311 (4%)
Query: 10 DARQVFDAMHLR----NVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTFGSII 65
DA +F M + NVV+++S+IS G+ ++A + M+ P+ +TF ++I
Sbjct: 278 DALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALI 337
Query: 66 KACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIKD-- 123
A G +L+ +IK + N L++ + ++ A +F + KD
Sbjct: 338 DAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCF 397
Query: 124 --LISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQ 181
+++++++I+GF + + LFR+M +G+ + ++ + + ++
Sbjct: 398 PDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVG-DTVTYTTLIQGLFHDGDCDNAQK 456
Query: 182 IHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESP----DLVSWNAIIAAFA 237
+ G+ ++ + L D G L A F ++ D+ + +I
Sbjct: 457 VFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMC 516
Query: 238 DSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVA 297
+G ++ +F + G+ P+ +T+ +++ S L + + + + G
Sbjct: 517 KAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSG 576
Query: 298 LYNSLLTMYTK 308
YN+L+ + +
Sbjct: 577 TYNTLIRAHLR 587
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 124/288 (43%), Gaps = 45/288 (15%)
Query: 4 KCGSMKDARQVFDAMHLR----NVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQL 59
K G +A +++D M R ++ ++ S+++G+ + + ++A M+ M+ FPD +
Sbjct: 342 KEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVV 401
Query: 60 TFGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFT-M 118
T+ ++IK C + + G +L + G G V LI + G +A VF M
Sbjct: 402 TYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQM 461
Query: 119 IS---IKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSA------ 169
+S D++++S ++ G G +AL +F D +++ + + ++ ++
Sbjct: 462 VSDGVPPDIMTYSILLDGLCNNGKLEKALEVF-DYMQKSEIKLDIYIYTTMIEGMCKAGK 520
Query: 170 --------CSSLLE---PE---YGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAK 215
CS L+ P Y I G+C+K R + +L + G LP++
Sbjct: 521 VDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSK----RLLQEAYALLKKMKEDGPLPNSG 576
Query: 216 TAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSIT 263
T +N +I A GD + + R+M + D+ T
Sbjct: 577 T------------YNTLIRAHLRDGDKAASAELIREMRSCRFVGDAST 612
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 112/465 (24%), Positives = 208/465 (44%), Gaps = 47/465 (10%)
Query: 22 NVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTFGSIIKACCIAGDIYLGRQLH 81
++V+ S+++G+ + +EAV + QM+ G+ PD +TF +++ L
Sbjct: 134 SIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALV 193
Query: 82 AHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISI----KDLISWSSMIRGFTQL 137
++ G LV +I+ G+ A ++ + D++ +S++I +
Sbjct: 194 ERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKY 253
Query: 138 GYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFS 197
+ +AL LF +M +G+ +P+ F S+ S + YGR +S
Sbjct: 254 RHVDDALNLFTEMDNKGI-RPDVFTYSSLISCLCN-----YGR---------------WS 292
Query: 198 GCS--LCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHI 255
S L DM + +I +P++V++N++I AFA G EA +F +M+
Sbjct: 293 DASRLLSDMLER------------KI-NPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQR 339
Query: 256 GLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDA 315
+ P+ +T+ SL+ L++ QI + +V +V YN+L+ + K + D
Sbjct: 340 SIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDG 399
Query: 316 LSVFEAISKN---ANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGT 372
+ +F +S+ N V++ ++ Q +FKQM+ PN++T LL
Sbjct: 400 MELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDG 459
Query: 373 CAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTE----NPN 428
+ LE V + KS + D+ N + + K G V +F S P+
Sbjct: 460 LCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPD 519
Query: 429 VISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSA 473
VI+++++I G+ GL EA LF KM+ G P+ TY ++ A
Sbjct: 520 VIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRA 564
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 108/540 (20%), Positives = 244/540 (45%), Gaps = 47/540 (8%)
Query: 22 NVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTFGSIIKACCIAGDIYLGRQLH 81
++V ++ ++S ++ + + + +M G + T+ +I C + +
Sbjct: 64 SIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAIL 123
Query: 82 AHVIKSGFGGHLVAQNGLISMYTNFGQVAHA-SDVFTMISI---KDLISWSSMIRGFTQL 137
++K G+G +V N L++ + + +++ A + V M+ + D +++++++ G Q
Sbjct: 124 GKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQH 183
Query: 138 GYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFS 197
EA+ L M+ +G QP+ G+V + EP+ L+ +
Sbjct: 184 NKASEAVALVERMVVKGC-QPDLVTYGAVINGLCKRGEPDLA---------LNLLNKMEK 233
Query: 198 GCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGL 257
G +IE+ D+V ++ +I + ++A+++F +M + G+
Sbjct: 234 G---------------------KIEA-DVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGI 271
Query: 258 IPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALS 317
PD T+ SL+ + + ++ S +++ N V +NSL+ + K L +A
Sbjct: 272 RPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEK 331
Query: 318 VFEAI---SKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCA 374
+F+ + S + N+V++N++++ H + E ++F M+ + P+++T L+
Sbjct: 332 LFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFC 391
Query: 375 ELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTE----NPNVI 430
+ + G ++ + GLV + LI + + +AQ VF +PN++
Sbjct: 392 KAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIM 451
Query: 431 SWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTM 490
++++L+ G +G +A+ +F ++ + P+ TY + G VE+GW+L+ ++
Sbjct: 452 TYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSL 511
Query: 491 EEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFD---PDITTWKTLLSSCKTHGN 547
+ G+ P ++ M+ + G EA T K D PD T+ TL+ + G+
Sbjct: 512 SLK-GVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGD 570
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 104/487 (21%), Positives = 214/487 (43%), Gaps = 52/487 (10%)
Query: 13 QVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTFGSIIKACCIAG 72
Q+ + + + V++T+++ G Q+ + +EAV + +M+ G PD +T+G++I C G
Sbjct: 160 QMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRG 219
Query: 73 DIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIK----DLISWS 128
+ L L + K +V + +I + V A ++FT + K D+ ++S
Sbjct: 220 EPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYS 279
Query: 129 SMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAK 188
S+I G +A L DML + + P
Sbjct: 280 SLISCLCNYGRWSDASRLLSDMLERKI-NP------------------------------ 308
Query: 189 FGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQI----ESPDLVSWNAIIAAFADSGDANE 244
NV + SL D +AK G L A+ F ++ P++V++N++I F +E
Sbjct: 309 -----NVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDE 363
Query: 245 AISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLT 304
A IF M+ +PD +T+ +L+ + GM++ + + G Y +L+
Sbjct: 364 AQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIH 423
Query: 305 MYTKCSNLHDALSVFEAISKNA---NLVSWNAILSACLQHKQAGETFRLFKQMLFSENKP 361
+ + S+ +A VF+ + + N++++N +L ++ + + +F+ + S+ +P
Sbjct: 424 GFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEP 483
Query: 362 NMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVF 421
++ T + + +E G + C G+ DV N +I + K G A +F
Sbjct: 484 DIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLF 543
Query: 422 DSTEN----PNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHI 477
+ P+ ++++LI + G + L ++MR+ + TY G+++ H
Sbjct: 544 IKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTY-GLVTDMLHD 602
Query: 478 GLVEEGW 484
G +++G+
Sbjct: 603 GRLDKGF 609
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 80/373 (21%), Positives = 174/373 (46%), Gaps = 14/373 (3%)
Query: 224 PDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQI 283
P +V+ N+++ F +EA+++ QM+ +G PD++TF +L+ ++ + +
Sbjct: 133 PSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVAL 192
Query: 284 HSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISK---NANLVSWNAILSACLQ 340
+V G ++ Y +++ K AL++ + K A++V ++ ++ + +
Sbjct: 193 VERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCK 252
Query: 341 HKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSV 400
++ + LF +M +P++ T ++L+ +++ ++ + +V
Sbjct: 253 YRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVT 312
Query: 401 SNGLIDMYAKCGSVIHAQRVFDS----TENPNVISWSSLIVGYAMSGLGHEALNLFRKMR 456
N LID +AK G +I A+++FD + +PN+++++SLI G+ M EA +F M
Sbjct: 313 FNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMV 372
Query: 457 NLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCL 516
+ P+ VTY +++ V +G L+ M G+ ++ ++ +A
Sbjct: 373 SKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRR-GLVGNTVTYTTLIHGFFQASDC 431
Query: 517 YEAETFIRK---TGFDPDITTWKTLLSSCKTHGNVDIAERAAENIL--KLDPSNSAALVL 571
A+ ++ G P+I T+ TLL +G ++ A E + K++P + +
Sbjct: 432 DNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEP-DIYTYNI 490
Query: 572 LSSIHASAGNWED 584
+S AG ED
Sbjct: 491 MSEGMCKAGKVED 503
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 76/343 (22%), Positives = 153/343 (44%), Gaps = 18/343 (5%)
Query: 224 PDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITF-LSLLCACTSPMALNQGMQ 282
P +V ++ +++A A + IS +M +G+ + T+ + + C C L+ +
Sbjct: 63 PSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRS-QLSFALA 121
Query: 283 IHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISK---NANLVSWNAILSACL 339
I ++K+G+ + NSLL + + + +A+++ + + + + V++ ++
Sbjct: 122 ILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLF 181
Query: 340 QHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVS 399
QH +A E L ++M+ +P+++T ++ + ++ + K + DV
Sbjct: 182 QHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVV 241
Query: 400 VSNGLIDMYAKCGSVIHAQRVFDSTEN----PNVISWSSLIVGYAMSGLGHEALNLFRKM 455
+ + +ID K V A +F +N P+V ++SSLI G +A L M
Sbjct: 242 IYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDM 301
Query: 456 RNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFS-----CMVDLL 510
+ PN VT+ ++ A + G + E L++ M + P + S CM D L
Sbjct: 302 LERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRL 361
Query: 511 ARAGCLYEAETFIRKTGFDPDITTWKTLLSS-CKTHGNVDIAE 552
A ++ T + PD+ T+ TL++ CK VD E
Sbjct: 362 DEAQQIF---TLMVSKDCLPDVVTYNTLINGFCKAKKVVDGME 401
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/275 (21%), Positives = 128/275 (46%), Gaps = 13/275 (4%)
Query: 2 YGKCGSMKDARQVFDAMHLR----NVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPD 57
+ K G + +A ++FD M R N+V++ S+I+G+ + + +EA ++ M+ PD
Sbjct: 320 FAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPD 379
Query: 58 QLTFGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFT 117
+T+ ++I C A + G +L + + G G+ V LI + +A VF
Sbjct: 380 VVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFK 439
Query: 118 -MISI---KDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSL 173
M+S +++++++++ G + G +A+ +F + L++ +P+ + +
Sbjct: 440 QMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVF-EYLQKSKMEPDIYTYNIMSEGMCKA 498
Query: 174 LEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIES----PDLVSW 229
+ E G + + G+ +V + ++ + K G A T F +++ PD ++
Sbjct: 499 GKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTY 558
Query: 230 NAIIAAFADSGDANEAISIFRQMMHIGLIPDSITF 264
N +I A GD + + ++M D+ T+
Sbjct: 559 NTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTY 593
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 116/538 (21%), Positives = 243/538 (45%), Gaps = 37/538 (6%)
Query: 14 VFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTFGSIIKACCIAGD 73
V D NVV++ ++I+G+ + G+ + A ++ M + G PD + + ++I AG
Sbjct: 277 VLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGM 336
Query: 74 IYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIK----DLISWSS 129
+ +G +L + + G +V + I +Y G +A AS V+ + + ++++++
Sbjct: 337 LGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTI 396
Query: 130 MIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSV---FSACSSLLEPEYGRQIHGIC 186
+I+G Q G EA ++ +L++G+ +P+ S+ F C +L G ++
Sbjct: 397 LIKGLCQDGRIYEAFGMYGQILKRGM-EPSIVTYSSLIDGFCKCGNL---RSGFALYEDM 452
Query: 187 AKFGLVRNVFSGCSLCDMYAKCGFLPSAK----TAFYQIESPDLVSWNAIIAAFADSGDA 242
K G +V L D +K G + A Q ++V +N++I +
Sbjct: 453 IKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRF 512
Query: 243 NEAISIFRQMMHIGLIPDSITFLSLLC------ACTSPMALNQGMQIHSYIVKVGFNKEV 296
+EA+ +FR M G+ PD TF +++ A M G+Q+ + + + ++
Sbjct: 513 DEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADI 572
Query: 297 ALYNSLLTMYTKCSNLHDALSVFEAISK---NANLVSWNAILSACLQHKQAGETFRLFKQ 353
A+ N ++ + KC + DA F + + ++V++N ++ ++ E R+F+
Sbjct: 573 AVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFEL 632
Query: 354 MLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGS 413
+ + PN +T+T L+ + ++ ++ + G + L+D ++K
Sbjct: 633 LKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVD 692
Query: 414 VIHAQRVFDSTE----NPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVG 469
+ + ++F+ + +P+++S+S +I G G EA N+F + + + P+ V Y
Sbjct: 693 IEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAI 752
Query: 470 VLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTG 527
++ +G + E LY M G+ P DLL RA Y ++ G
Sbjct: 753 LIRGYCKVGRLVEAALLYEHMLRN-GVKPD--------DLLQRALSEYNPPKWLMSKG 801
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 90/376 (23%), Positives = 176/376 (46%), Gaps = 20/376 (5%)
Query: 223 SPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQ 282
+P++V++ +I F G+ + A +F+ M G+ PD I + +L+ L G +
Sbjct: 283 APNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHK 342
Query: 283 IHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAI---SKNANLVSWNAILSACL 339
+ S + G +V +++S + +Y K +L A V++ + + N+V++ ++
Sbjct: 343 LFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLC 402
Query: 340 QHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVS 399
Q + E F ++ Q+L +P+++T ++L+ + +L G ++ +K G DV
Sbjct: 403 QDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVV 462
Query: 400 VSNGLIDMYAKCGSVIHAQR----VFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKM 455
+ L+D +K G ++HA R + + NV+ ++SLI G+ EAL +FR M
Sbjct: 463 IYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLM 522
Query: 456 RNLGVRPNEVTYVGVLSA-------CSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVD 508
G++P+ T+ V+ C H+ G L++ M+ I + ++
Sbjct: 523 GIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTI-GLQLFDLMQRN-KISADIAVCNVVIH 580
Query: 509 LLARAGCLYEAETFIR---KTGFDPDITTWKTLLSSCKTHGNVDIAERAAENILKLDPSN 565
LL + + +A F + +PDI T+ T++ + +D AER E +LK+ P
Sbjct: 581 LLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFE-LLKVTPFG 639
Query: 566 SAALVLLSSIHASAGN 581
+ L IH N
Sbjct: 640 PNTVTLTILIHVLCKN 655
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 90/397 (22%), Positives = 182/397 (45%), Gaps = 27/397 (6%)
Query: 1 MYGKCGSMKDARQVFDAMHLR----NVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFP 56
+Y K G + A V+ M + NVV++T +I G Q+G+ EA MY Q+L+ G P
Sbjct: 365 VYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEP 424
Query: 57 DQLTFGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVF 116
+T+ S+I C G++ G L+ +IK G+ +V L+ + G + HA
Sbjct: 425 SIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFS 484
Query: 117 TMI---SIK-DLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVY--QPNEFVLGSVF--- 167
+ SI+ +++ ++S+I G+ +L EAL +FR M G+Y +P+ +V
Sbjct: 485 VKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLM---GIYGIKPDVATFTTVMRVS 541
Query: 168 ---SACSSLLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQI--- 221
A ++P G Q+ + + + ++ + + KC + A F +
Sbjct: 542 IMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEG 601
Query: 222 -ESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQG 280
PD+V++N +I + +EA IF + P+++T L+ ++
Sbjct: 602 KMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGA 661
Query: 281 MQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNA---NLVSWNAILSA 337
+++ S + + G Y L+ ++K ++ + +FE + + ++VS++ I+
Sbjct: 662 IRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDG 721
Query: 338 CLQHKQAGETFRLFKQMLFSENKPNMITITNLL-GTC 373
+ + E +F Q + ++ P+++ L+ G C
Sbjct: 722 LCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYC 758
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 99/234 (42%), Gaps = 41/234 (17%)
Query: 328 LVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLL-GTCA------------ 374
+VS N +L L Q RL +L PN++T L+ G C
Sbjct: 252 IVSCNKVLKG-LSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFK 310
Query: 375 ----------------------ELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCG 412
+ L +G+++ ++ G+ LDV V + ID+Y K G
Sbjct: 311 VMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSG 370
Query: 413 SVIHA----QRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYV 468
+ A +R+ +PNV++++ LI G G +EA ++ ++ G+ P+ VTY
Sbjct: 371 DLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYS 430
Query: 469 GVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETF 522
++ G + G+ LY M ++G PP + +VD L++ G + A F
Sbjct: 431 SLIDGFCKCGNLRSGFALYEDM-IKMGYPPDVVIYGVLVDGLSKQGLMLHAMRF 483
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 119/548 (21%), Positives = 239/548 (43%), Gaps = 48/548 (8%)
Query: 2 YGKCGSMKDARQVFDAMH----LRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPD 57
+ K G +++A ++F M NVV++ ++I G G+ +EA + +M+ G P
Sbjct: 270 FCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPT 329
Query: 58 QLTFGSIIKACCIA---GDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASD 114
+T+ ++K A GD Y + + K GF +++ N LI + G + A
Sbjct: 330 LITYSILVKGLTRAKRIGDAYF---VLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKA-- 384
Query: 115 VFTMISIKDLI----------SWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLG 164
I IKDL+ +++++I+G+ + G A L ++ML G + N+
Sbjct: 385 ----IEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIG-FNVNQGSFT 439
Query: 165 SVFSA-CSSLLEPEYGRQIHGICAKFGLVRNVFSG----CSLCDMYAKCGFLPSAKTAFY 219
SV CS L+ R + + L+RN+ G +L K G A ++
Sbjct: 440 SVICLLCSHLMFDSALRFVGEM-----LLRNMSPGGGLLTTLISGLCKHGKHSKALELWF 494
Query: 220 QIESP----DLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPM 275
Q + D + NA++ ++G +EA I ++++ G + D +++ +L+ C
Sbjct: 495 QFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKK 554
Query: 276 ALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNA---NLVSWN 332
L++ +VK G + Y+ L+ + + +A+ ++ +N ++ +++
Sbjct: 555 KLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYS 614
Query: 333 AILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKS 392
++ C + ++ E F +M+ +PN + +L+ L + ++
Sbjct: 615 VMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHK 674
Query: 393 GLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTE----NPNVISWSSLIVGYAMSGLGHEA 448
G+ + + LI + V A+ +F+ PNV +++LI GY G +
Sbjct: 675 GISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKV 734
Query: 449 LNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVD 508
L R+M + V PN++TY ++ + G V E L N M E+ +P + + +
Sbjct: 735 ECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYG 794
Query: 509 LLARAGCL 516
L + G L
Sbjct: 795 YLKQGGVL 802
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 122/565 (21%), Positives = 221/565 (39%), Gaps = 110/565 (19%)
Query: 52 SGFFPDQLTFGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAH 111
G PD F + I A C G + +L + + ++G ++V N +I G
Sbjct: 254 KGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVID---GLGMCGR 310
Query: 112 ASDVFTMISIK--------DLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVL 163
+ F M K LI++S +++G T+ +A ++ ++M ++G + PN V
Sbjct: 311 YDEAF-MFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKG-FPPNVIVY 368
Query: 164 GSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIES 223
+L D + + G L A IE
Sbjct: 369 N-----------------------------------NLIDSFIEAGSLNKA------IEI 387
Query: 224 PDLV----------SWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTS 273
DL+ ++N +I + +G A+ A + ++M+ IG + +F S++C S
Sbjct: 388 KDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCS 447
Query: 274 PMALNQGMQI----------------------------HSYIVKV-------GFNKEVAL 298
+ + ++ HS +++ GF +
Sbjct: 448 HLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRT 507
Query: 299 YNSLLTMYTKCSNLHDALSVFEAISKNA---NLVSWNAILSACLQHKQAGETFRLFKQML 355
N+LL + L +A + + I + VS+N ++S C K+ E F +M+
Sbjct: 508 SNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMV 567
Query: 356 FSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVI 415
KP+ T + L+ + +E Q ++G++ DV + +ID K
Sbjct: 568 KRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTE 627
Query: 416 HAQRVFDS--TEN--PNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVL 471
Q FD ++N PN + ++ LI Y SG AL L M++ G+ PN TY ++
Sbjct: 628 EGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLI 687
Query: 472 SACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRK---TGF 528
S I VEE L+ M E G+ P H++ ++D + G + + E +R+
Sbjct: 688 KGMSIISRVEEAKLLFEEMRME-GLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNV 746
Query: 529 DPDITTWKTLLSSCKTHGNVDIAER 553
P+ T+ ++ GNV A R
Sbjct: 747 HPNKITYTVMIGGYARDGNVTEASR 771
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 80/383 (20%), Positives = 144/383 (37%), Gaps = 54/383 (14%)
Query: 223 SPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQ 282
SPD+ + I AF G EA+ +F +M G+ P+ +TF
Sbjct: 257 SPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTF------------------ 298
Query: 283 IHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNA---NLVSWNAILSACL 339
N+++ C +A E + + L++++ ++
Sbjct: 299 -----------------NTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLT 341
Query: 340 QHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVS 399
+ K+ G+ + + K+M PN+I NL+ + E SL ++ V GL L S
Sbjct: 342 RAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSS 401
Query: 400 VSNGLIDMYAKCGSVIHAQRVFDSTE----NPNVISWSSLIVGYAMSGLGHEALNLFRKM 455
N LI Y K G +A+R+ N N S++S+I + AL +M
Sbjct: 402 TYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEM 461
Query: 456 RNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGC 515
+ P ++S G + L+ + + R + ++ L AG
Sbjct: 462 LLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTS-NALLHGLCEAGK 520
Query: 516 LYEA---ETFIRKTGFDPDITTWKTLLSSCKTHGNVDIAERAAENILK--LDPSNSAALV 570
L EA + I G D ++ TL+S C +D A + ++K L P N +
Sbjct: 521 LDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSI 580
Query: 571 L------LSSIHASAGNWEDVAK 587
L ++ + + W+D +
Sbjct: 581 LICGLFNMNKVEEAIQFWDDCKR 603
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 119/548 (21%), Positives = 239/548 (43%), Gaps = 48/548 (8%)
Query: 2 YGKCGSMKDARQVFDAMH----LRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPD 57
+ K G +++A ++F M NVV++ ++I G G+ +EA + +M+ G P
Sbjct: 270 FCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPT 329
Query: 58 QLTFGSIIKACCIA---GDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASD 114
+T+ ++K A GD Y + + K GF +++ N LI + G + A
Sbjct: 330 LITYSILVKGLTRAKRIGDAYF---VLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKA-- 384
Query: 115 VFTMISIKDLI----------SWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLG 164
I IKDL+ +++++I+G+ + G A L ++ML G + N+
Sbjct: 385 ----IEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIG-FNVNQGSFT 439
Query: 165 SVFSA-CSSLLEPEYGRQIHGICAKFGLVRNVFSG----CSLCDMYAKCGFLPSAKTAFY 219
SV CS L+ R + + L+RN+ G +L K G A ++
Sbjct: 440 SVICLLCSHLMFDSALRFVGEM-----LLRNMSPGGGLLTTLISGLCKHGKHSKALELWF 494
Query: 220 QIESP----DLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPM 275
Q + D + NA++ ++G +EA I ++++ G + D +++ +L+ C
Sbjct: 495 QFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKK 554
Query: 276 ALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNA---NLVSWN 332
L++ +VK G + Y+ L+ + + +A+ ++ +N ++ +++
Sbjct: 555 KLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYS 614
Query: 333 AILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKS 392
++ C + ++ E F +M+ +PN + +L+ L + ++
Sbjct: 615 VMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHK 674
Query: 393 GLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTE----NPNVISWSSLIVGYAMSGLGHEA 448
G+ + + LI + V A+ +F+ PNV +++LI GY G +
Sbjct: 675 GISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKV 734
Query: 449 LNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVD 508
L R+M + V PN++TY ++ + G V E L N M E+ +P + + +
Sbjct: 735 ECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYG 794
Query: 509 LLARAGCL 516
L + G L
Sbjct: 795 YLKQGGVL 802
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 122/565 (21%), Positives = 221/565 (39%), Gaps = 110/565 (19%)
Query: 52 SGFFPDQLTFGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAH 111
G PD F + I A C G + +L + + ++G ++V N +I G
Sbjct: 254 KGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVID---GLGMCGR 310
Query: 112 ASDVFTMISIK--------DLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVL 163
+ F M K LI++S +++G T+ +A ++ ++M ++G + PN V
Sbjct: 311 YDEAF-MFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKG-FPPNVIVY 368
Query: 164 GSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIES 223
+L D + + G L A IE
Sbjct: 369 N-----------------------------------NLIDSFIEAGSLNKA------IEI 387
Query: 224 PDLV----------SWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTS 273
DL+ ++N +I + +G A+ A + ++M+ IG + +F S++C S
Sbjct: 388 KDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCS 447
Query: 274 PMALNQGMQI----------------------------HSYIVKV-------GFNKEVAL 298
+ + ++ HS +++ GF +
Sbjct: 448 HLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRT 507
Query: 299 YNSLLTMYTKCSNLHDALSVFEAISKNA---NLVSWNAILSACLQHKQAGETFRLFKQML 355
N+LL + L +A + + I + VS+N ++S C K+ E F +M+
Sbjct: 508 SNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMV 567
Query: 356 FSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVI 415
KP+ T + L+ + +E Q ++G++ DV + +ID K
Sbjct: 568 KRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTE 627
Query: 416 HAQRVFDS--TEN--PNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVL 471
Q FD ++N PN + ++ LI Y SG AL L M++ G+ PN TY ++
Sbjct: 628 EGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLI 687
Query: 472 SACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRK---TGF 528
S I VEE L+ M E G+ P H++ ++D + G + + E +R+
Sbjct: 688 KGMSIISRVEEAKLLFEEMRME-GLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNV 746
Query: 529 DPDITTWKTLLSSCKTHGNVDIAER 553
P+ T+ ++ GNV A R
Sbjct: 747 HPNKITYTVMIGGYARDGNVTEASR 771
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 80/383 (20%), Positives = 144/383 (37%), Gaps = 54/383 (14%)
Query: 223 SPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQ 282
SPD+ + I AF G EA+ +F +M G+ P+ +TF
Sbjct: 257 SPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTF------------------ 298
Query: 283 IHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNA---NLVSWNAILSACL 339
N+++ C +A E + + L++++ ++
Sbjct: 299 -----------------NTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLT 341
Query: 340 QHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVS 399
+ K+ G+ + + K+M PN+I NL+ + E SL ++ V GL L S
Sbjct: 342 RAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSS 401
Query: 400 VSNGLIDMYAKCGSVIHAQRVFDSTE----NPNVISWSSLIVGYAMSGLGHEALNLFRKM 455
N LI Y K G +A+R+ N N S++S+I + AL +M
Sbjct: 402 TYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEM 461
Query: 456 RNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGC 515
+ P ++S G + L+ + + R + ++ L AG
Sbjct: 462 LLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTS-NALLHGLCEAGK 520
Query: 516 LYEA---ETFIRKTGFDPDITTWKTLLSSCKTHGNVDIAERAAENILK--LDPSNSAALV 570
L EA + I G D ++ TL+S C +D A + ++K L P N +
Sbjct: 521 LDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSI 580
Query: 571 L------LSSIHASAGNWEDVAK 587
L ++ + + W+D +
Sbjct: 581 LICGLFNMNKVEEAIQFWDDCKR 603
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 108/462 (23%), Positives = 213/462 (46%), Gaps = 44/462 (9%)
Query: 22 NVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTFGSIIKACCIAGDIYLGRQLH 81
++V+ +S+++GY + + ++AV + QM+ G+ PD TF ++I + L
Sbjct: 152 DIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALV 211
Query: 82 AHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMIS---IK-DLISWSSMIRGFTQL 137
+++ G LV +++ G + A ++ + IK +++ ++++I +
Sbjct: 212 DQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKY 271
Query: 138 GYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFS 197
+ A+ LF +M +G+ +PN S+ + + YGR +S
Sbjct: 272 RHVEVAVDLFTEMETKGI-RPNVVTYNSLINCLCN-----YGR---------------WS 310
Query: 198 GCS--LCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHI 255
S L +M K +I +P++V++NA+I AF G EA + +M+
Sbjct: 311 DASRLLSNMLEK------------KI-NPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQR 357
Query: 256 GLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDA 315
+ PD+IT+ L+ L++ Q+ ++V + YN+L+ + KC + D
Sbjct: 358 SIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDG 417
Query: 316 LSVFEAISKNA---NLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGT 372
+ +F +S+ N V++ I+ Q +FKQM+ + +++T + LL
Sbjct: 418 VELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHG 477
Query: 373 CAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTE-NPNVIS 431
L+ + + KS + L++ + N +I+ K G V A +F S P+V++
Sbjct: 478 LCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVT 537
Query: 432 WSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSA 473
++++I G L EA +LFRKM+ G PN TY ++ A
Sbjct: 538 YNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRA 579
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 107/458 (23%), Positives = 197/458 (43%), Gaps = 58/458 (12%)
Query: 3 GKCGSMK--DARQVFDAM----HLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFP 56
G C S + DA + D M + + ++T++I G + + +EAV + QM++ G P
Sbjct: 162 GYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQP 221
Query: 57 DQLTFGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVF 116
D +T+G+++ C GDI L L + + ++V N +I + V A D+F
Sbjct: 222 DLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLF 281
Query: 117 TMISIK----DLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSAC-- 170
T + K ++++++S+I G +A L +ML + + PN ++ A
Sbjct: 282 TEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKI-NPNVVTFNALIDAFFK 340
Query: 171 -SSLLEPE-----------------YGRQIHGICA-----------KFGLVR----NVFS 197
L+E E Y I+G C KF + + N+ +
Sbjct: 341 EGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQT 400
Query: 198 GCSLCDMYAKCGFLPSAKTAFYQIESPDL----VSWNAIIAAFADSGDANEAISIFRQMM 253
+L + + KC + F ++ L V++ II F +GD + A +F+QM+
Sbjct: 401 YNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMV 460
Query: 254 HIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLH 313
+ D +T+ LL S L+ + I Y+ K + +YN+++ K +
Sbjct: 461 SNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVG 520
Query: 314 DALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNL---- 369
+A +F ++S ++V++N ++S + E LF++M PN T L
Sbjct: 521 EAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRAN 580
Query: 370 LGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDM 407
L C AS E+ ++ SG V D S + + +M
Sbjct: 581 LRDCDRAASAELIKEMR----SSGFVGDASTISLVTNM 614
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 104/515 (20%), Positives = 214/515 (41%), Gaps = 50/515 (9%)
Query: 40 NEAVVMYIQMLRSGFFPDQLTFGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGL 99
++AV ++ M++S FP + F ++ A L L + G L +
Sbjct: 65 DDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIF 124
Query: 100 ISMYTNFGQVAHASDVFT-MISI---KDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGV 155
I+ + Q++ A V M+ + D+++ SS++ G+ +A+ L M+ G
Sbjct: 125 INCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG- 183
Query: 156 YQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAK 215
Y+P+ F ++ IHG+ L +L D + G
Sbjct: 184 YKPDTFTFTTL---------------IHGLF----LHNKASEAVALVDQMVQRGC----- 219
Query: 216 TAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPM 275
PDLV++ ++ GD + A+++ +M + + + F +++ +
Sbjct: 220 -------QPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYR 272
Query: 276 ALNQGMQIHSYIVKVGFNKEVALYNSL---LTMYTKCSNLHDALSVFEAISKNANLVSWN 332
+ + + + + G V YNSL L Y + S+ LS N N+V++N
Sbjct: 273 HVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFN 332
Query: 333 AILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKS 392
A++ A + + E +L ++M+ P+ IT L+ L+ Q+ F V
Sbjct: 333 ALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSK 392
Query: 393 GLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENP----NVISWSSLIVGYAMSGLGHEA 448
+ ++ N LI+ + KC V +F N ++++++I G+ +G A
Sbjct: 393 DCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSA 452
Query: 449 LNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEE---ELGIPPAREHFSC 505
+F++M + V + +TY +L G ++ ++ +++ EL I ++
Sbjct: 453 QMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFI----YNT 508
Query: 506 MVDLLARAGCLYEAETFIRKTGFDPDITTWKTLLS 540
M++ + +AG + EA PD+ T+ T++S
Sbjct: 509 MIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMIS 543
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/337 (21%), Positives = 147/337 (43%), Gaps = 40/337 (11%)
Query: 224 PDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITF-LSLLCACTSPMALNQGMQ 282
P +V +N +++A A IS+ QM +G+ D T+ + + C C L+ +
Sbjct: 81 PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRS-QLSLALA 139
Query: 283 IHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISK---NANLVSWNAILSACL 339
+ + ++K+G+ ++ +SLL Y + DA+++ + + + + ++ ++
Sbjct: 140 VLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLF 199
Query: 340 QHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVS 399
H +A E L QM+ +P+++T G V++
Sbjct: 200 LHNKASEAVALVDQMVQRGCQPDLVTY--------------------------GTVVNGL 233
Query: 400 VSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLG 459
G ID+ + + A R+ NV+ ++++I A++LF +M G
Sbjct: 234 CKRGDIDLALNLLNKMEAARI-----KANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKG 288
Query: 460 VRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEA 519
+RPN VTY +++ + G + L + M E+ I P F+ ++D + G L EA
Sbjct: 289 IRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEK-KINPNVVTFNALIDAFFKEGKLVEA 347
Query: 520 ETF---IRKTGFDPDITTWKTLLSSCKTHGNVDIAER 553
E + + DPD T+ L++ H +D A++
Sbjct: 348 EKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQ 384
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/266 (21%), Positives = 109/266 (40%), Gaps = 45/266 (16%)
Query: 343 QAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEV----GNQ-------------- 384
+ + LF M+ S P+++ LL A++ E+ G Q
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 385 --VHCFSVKSGLVLDVSV---------SNGLIDMYAKCGSVIHAQRVFDSTE-------- 425
++CF +S L L ++V ++ + + H++R+ D+
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 426 --NPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEG 483
P+ ++++LI G + EA+ L +M G +P+ VTY V++ G ++
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 484 WNLYNTMEEELGIPPAREHFSCMVDLLAR---AGCLYEAETFIRKTGFDPDITTWKTLLS 540
NL N ME I F+ ++D L + + T + G P++ T+ +L++
Sbjct: 243 LNLLNKMEAA-RIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLIN 301
Query: 541 SCKTHGNVDIAERAAENIL--KLDPS 564
+G A R N+L K++P+
Sbjct: 302 CLCNYGRWSDASRLLSNMLEKKINPN 327
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 108/465 (23%), Positives = 207/465 (44%), Gaps = 47/465 (10%)
Query: 22 NVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTFGSIIKACCIAGDIYLGRQLH 81
++V+ +S+++GY + ++AV + QM+ G+ PD +TF ++I + L
Sbjct: 79 SIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALV 138
Query: 82 AHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIK----DLISWSSMIRGFTQL 137
+++ G +LV +++ G + A ++ + D++ ++++I +
Sbjct: 139 DRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKY 198
Query: 138 GYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFS 197
+ +AL LF++M +G+ +PN S+ S S YGR +S
Sbjct: 199 RHVDDALNLFKEMETKGI-RPNVVTYSSLISCLCS-----YGR---------------WS 237
Query: 198 GCS--LCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHI 255
S L DM K +I +P+LV++NA+I AF G EA + M+
Sbjct: 238 DASQLLSDMIEK------------KI-NPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKR 284
Query: 256 GLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDA 315
+ PD T+ SL+ L++ Q+ ++V ++ YN+L+ + K + D
Sbjct: 285 SIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDG 344
Query: 316 LSVFEAISKNA---NLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGT 372
+F +S + V++ ++ ++FKQM+ P+++T + LL
Sbjct: 345 TELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDG 404
Query: 373 CAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTE----NPN 428
LE +V + KS + LD+ + +I+ K G V +F S PN
Sbjct: 405 LCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPN 464
Query: 429 VISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSA 473
V++++++I G L EA L +KM+ G P+ TY ++ A
Sbjct: 465 VVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRA 509
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/375 (21%), Positives = 170/375 (45%), Gaps = 13/375 (3%)
Query: 13 QVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTFGSIIKACCIAG 72
Q+ + + + +++T++I G + + +EAV + +M++ G P+ +T+G ++ C G
Sbjct: 105 QMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRG 164
Query: 73 DIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIK----DLISWS 128
DI L L + + +V N +I + V A ++F + K +++++S
Sbjct: 165 DIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYS 224
Query: 129 SMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAK 188
S+I G +A L DM+ + + PN ++ A + ++H K
Sbjct: 225 SLISCLCSYGRWSDASQLLSDMIEKKI-NPNLVTFNALIDAFVKEGKFVEAEKLHDDMIK 283
Query: 189 FGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIES----PDLVSWNAIIAAFADSGDANE 244
+ ++F+ SL + + L AK F + S PDL ++N +I F S +
Sbjct: 284 RSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVED 343
Query: 245 AISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLT 304
+FR+M H GL+ D++T+ +L+ + ++ +V G ++ Y+ LL
Sbjct: 344 GTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLD 403
Query: 305 MYTKCSNLHDALSVFEAISKNA---NLVSWNAILSACLQHKQAGETFRLFKQMLFSENKP 361
L AL VF+ + K+ ++ + ++ + + + + LF + KP
Sbjct: 404 GLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKP 463
Query: 362 NMITITNLL-GTCAE 375
N++T ++ G C++
Sbjct: 464 NVVTYNTMISGLCSK 478
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/372 (20%), Positives = 164/372 (44%), Gaps = 46/372 (12%)
Query: 223 SPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQ 282
P +V+ ++++ + ++A+++ QM+ +G PD+ITF +L+ ++ +
Sbjct: 77 EPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVA 136
Query: 283 IHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDA---LSVFEAISKNANLVSWNAILSACL 339
+ +V+ G + Y ++ K ++ A L+ EA A++V +N I+ +
Sbjct: 137 LVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLC 196
Query: 340 QHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVS 399
+++ + LFK+M +PN++T ++L+ +Q+ ++ + ++
Sbjct: 197 KYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLV 256
Query: 400 VSNGLIDMYAKCGSVIHAQRVFDS----TENPNVISWSSLIVGYAM-------------- 441
N LID + K G + A+++ D + +P++ +++SLI G+ M
Sbjct: 257 TFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFM 316
Query: 442 ---------------------SGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLV 480
S + LFR+M + G+ + VTY ++ H G
Sbjct: 317 VSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDC 376
Query: 481 EEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEA-ETF--IRKTGFDPDITTWKT 537
+ ++ M + G+PP +S ++D L G L +A E F ++K+ DI + T
Sbjct: 377 DNAQKVFKQMVSD-GVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTT 435
Query: 538 LLSSCKTHGNVD 549
++ G VD
Sbjct: 436 MIEGMCKAGKVD 447
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/311 (18%), Positives = 132/311 (42%), Gaps = 13/311 (4%)
Query: 10 DARQVFDAMHLR----NVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTFGSII 65
DA +F M + NVV+++S+IS G+ ++A + M+ P+ +TF ++I
Sbjct: 203 DALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALI 262
Query: 66 KACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIKD-- 123
A G +LH +IK + N LI+ + ++ A +F + KD
Sbjct: 263 DAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCF 322
Query: 124 --LISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQ 181
L +++++I+GF + + LFR+M +G+ + ++ + + ++
Sbjct: 323 PDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVG-DTVTYTTLIQGLFHDGDCDNAQK 381
Query: 182 IHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESP----DLVSWNAIIAAFA 237
+ G+ ++ + L D G L A F ++ D+ + +I
Sbjct: 382 VFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMC 441
Query: 238 DSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVA 297
+G ++ +F + G+ P+ +T+ +++ S L + + + + G +
Sbjct: 442 KAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSG 501
Query: 298 LYNSLLTMYTK 308
YN+L+ + +
Sbjct: 502 TYNTLIRAHLR 512
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/274 (20%), Positives = 120/274 (43%), Gaps = 13/274 (4%)
Query: 2 YGKCGSMKDARQVFDAMHLR----NVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPD 57
+ K G +A ++ D M R ++ ++ S+I+G+ + + ++A M+ M+ FPD
Sbjct: 265 FVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPD 324
Query: 58 QLTFGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFT 117
T+ ++IK C + + G +L + G G V LI + G +A VF
Sbjct: 325 LDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFK 384
Query: 118 -MIS---IKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSL 173
M+S D++++S ++ G G +AL +F D +++ + + ++ ++
Sbjct: 385 QMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVF-DYMQKSEIKLDIYIYTTMIEGMCKA 443
Query: 174 LEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIES----PDLVSW 229
+ + G + + G+ NV + ++ L A +++ PD ++
Sbjct: 444 GKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTY 503
Query: 230 NAIIAAFADSGDANEAISIFRQMMHIGLIPDSIT 263
N +I A GD + + R+M + D+ T
Sbjct: 504 NTLIRAHLRDGDKAASAELIREMRSCRFVGDAST 537
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 125/554 (22%), Positives = 236/554 (42%), Gaps = 25/554 (4%)
Query: 22 NVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTFGSIIKACCIAGDIYLGRQLH 81
NV + ++ G +N + +AV + +M R+ PD ++ ++I+ C ++ +L
Sbjct: 141 NVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELA 200
Query: 82 AHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISI----KDLISWSSMIRGFTQL 137
+ SG LV LI + G++ A + DL+ ++S+IRGF
Sbjct: 201 NEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDC 260
Query: 138 GYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFS 197
G LF ++L +G P ++ L + + +I + G+ NV++
Sbjct: 261 GELDRGKALFDEVLERG-DSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYT 319
Query: 198 GCSLCDMYAKCGFLPSA----KTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMM 253
L D G A + E P+ V++N II G +A+ I M
Sbjct: 320 YTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMK 379
Query: 254 HIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVG--FNKEVALYNSLLTMYTKCSN 311
PD+IT+ LL + L++ ++ ++K + +V YN+L+ K +
Sbjct: 380 KRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENR 439
Query: 312 LHDALSVFEAISKN---ANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITN 368
LH AL +++ + + + V+ N +L++ L+ + L+KQ+ S+ N T T
Sbjct: 440 LHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTA 499
Query: 369 LLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTEN-- 426
++ + L V + C S L V N L+ K GS+ A R+F+ +
Sbjct: 500 MIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDN 559
Query: 427 --PNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGW 484
P+V+S++ +I G +G A +L M G+ P+ TY +++ +G ++E
Sbjct: 560 NFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAI 619
Query: 485 NLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTLLSS--- 541
+ ++ M + G P ++ G + ++K D DI K L +
Sbjct: 620 SFFDKMVDS-GFEPDAHICDSVLKYCISQGETDKLTELVKKL-VDKDIVLDKELTCTVMD 677
Query: 542 --CKTHGNVDIAER 553
C + N+D+A+R
Sbjct: 678 YMCNSSANMDLAKR 691
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 80/352 (22%), Positives = 160/352 (45%), Gaps = 27/352 (7%)
Query: 226 LVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLL---CACTSPMALNQGMQ 282
LV+W +I AF +G +EA+ ++M +GL D + + SL+ C C L++G
Sbjct: 212 LVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGE---LDRGKA 268
Query: 283 IHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNA---NLVSWNAILSACL 339
+ +++ G + YN+L+ + K L +A +FE + + N+ ++ ++
Sbjct: 269 LFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLC 328
Query: 340 QHKQAGETFRLFKQMLFSENKPNMIT---ITN------LLGTCAELASLEVGNQVHCFSV 390
+ E +L M+ + +PN +T I N L+ E+ L + ++
Sbjct: 329 GVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNI 388
Query: 391 KSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALN 450
++L + G +D +K +++ S +P+VIS+++LI G H+AL+
Sbjct: 389 TYNILLGGLCAKGDLDEASK---LLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALD 445
Query: 451 LFRKM-RNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDL 509
++ + LG + VT +L++ G V + L+ + + I + ++ M+D
Sbjct: 446 IYDLLVEKLGA-GDRVTTNILLNSTLKAGDVNKAMELWKQISDS-KIVRNSDTYTAMIDG 503
Query: 510 LARAGCLYEAETFI---RKTGFDPDITTWKTLLSSCKTHGNVDIAERAAENI 558
+ G L A+ + R + P + + LLSS G++D A R E +
Sbjct: 504 FCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEM 555
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 74/376 (19%), Positives = 160/376 (42%), Gaps = 28/376 (7%)
Query: 2 YGKCGSMKDARQVFDAMHLR----NVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPD 57
+ K G +K+A ++F+ M R NV ++T +I G G+ EA+ + M+ P+
Sbjct: 292 FCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPN 351
Query: 58 QLTFGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFT 117
+T+ II C G + ++ + K + N L+ G + AS +
Sbjct: 352 AVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLY 411
Query: 118 MI------SIKDLISWSSMIRGF---TQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFS 168
++ + D+IS++++I G +L ++ L + L G +L S
Sbjct: 412 LMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLK 471
Query: 169 ACSSLLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIE----SP 224
A E +QI + +VRN + ++ D + K G L AK ++ P
Sbjct: 472 AGDVNKAMELWKQI----SDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQP 527
Query: 225 DLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIH 284
+ +N ++++ G ++A +F +M PD ++F ++ + +
Sbjct: 528 SVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLL 587
Query: 285 SYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAI-----SKNANLVSWNAILSACL 339
+ + G + ++ Y+ L+ + K L +A+S F+ + +A++ +++L C+
Sbjct: 588 VGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHIC--DSVLKYCI 645
Query: 340 QHKQAGETFRLFKQML 355
+ + L K+++
Sbjct: 646 SQGETDKLTELVKKLV 661
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 119 bits (297), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 101/491 (20%), Positives = 220/491 (44%), Gaps = 26/491 (5%)
Query: 92 HLVAQNGLISMYTNFGQVAHASDVFTMISIK----DLISWSSMIRGFTQLGYEIEALYLF 147
++ + N +I G++ A + ++ +K D+IS+S+++ G+ + G E++ ++
Sbjct: 245 NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFG-ELDKVWKL 303
Query: 148 RDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAK 207
+++++ +PN ++ GS+ + + + + G++ + +L D + K
Sbjct: 304 IEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCK 363
Query: 208 CGFLPSAKTAFYQIES----PDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSIT 263
G + +A FY++ S PD++++ AII+ F GD EA +F +M GL PDS+T
Sbjct: 364 RGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVT 423
Query: 264 FLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAIS 323
F L+ + ++H+++++ G + V Y +L+ K +L A + +
Sbjct: 424 FTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMW 483
Query: 324 K---NANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLE 380
K N+ ++N+I++ + E +L + + + +T T L+ + ++
Sbjct: 484 KIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMD 543
Query: 381 VGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFD----STENPNVISWSSLI 436
++ + GL + N L++ + G + +++ + PN +++SL+
Sbjct: 544 KAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLV 603
Query: 437 VGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGI 496
Y + A +++ M + GV P+ TY ++ ++E W L+ M+ + G
Sbjct: 604 KQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGK-GF 662
Query: 497 PPAREHFSCMVD-LLARAGCLYEAETF--IRKTGFDPDITTWKTLLSSCKTHGN-----V 548
+ +S ++ L R L E F +R+ G D + S K G V
Sbjct: 663 SVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFD-FFSDTKYKGKRPDTIV 721
Query: 549 DIAERAAENIL 559
D + EN L
Sbjct: 722 DPIDEIIENYL 732
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 102/479 (21%), Positives = 206/479 (43%), Gaps = 37/479 (7%)
Query: 6 GSMKDARQVFDAMHLR----NVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTF 61
G +K+A + M L+ +V+S++++++GY + G+ ++ + M R G P+ +
Sbjct: 260 GRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIY 319
Query: 62 GSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISI 121
GSII C + + + +I+ G V LI + G + AS F +
Sbjct: 320 GSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHS 379
Query: 122 KDL----ISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPE 177
+D+ ++++++I GF Q+G +EA LF +M +G+ +P+ + + +
Sbjct: 380 RDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGL-EPDSVTFTELINGYCKAGHMK 438
Query: 178 YGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIES----PDLVSWNAII 233
++H + G NV + +L D K G L SA +++ P++ ++N+I+
Sbjct: 439 DAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIV 498
Query: 234 AAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFN 293
SG+ EA+ + + GL D++T+ +L+ A +++ +I ++ G
Sbjct: 499 NGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQ 558
Query: 294 KEVALYNSLLTMYTKCSNLHDALSVF-----EAISKNANLVSWNAILSA-CLQHKQAGET 347
+ +N L+ + L D + + I+ NA ++N+++ C+++ T
Sbjct: 559 PTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNAT--TFNSLVKQYCIRNNLKAAT 616
Query: 348 FRLFKQMLFSENKPNMITITNLL-GTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLID 406
++K M P+ T NL+ G C E K G + VS + LI
Sbjct: 617 -AIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGK-GFSVSVSTYSVLIK 674
Query: 407 MYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEV 465
+ K + A+ VFD + + E + F + G RP+ +
Sbjct: 675 GFLKRKKFLEAREVFDQMRREGLAA-------------DKEIFDFFSDTKYKGKRPDTI 720
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/364 (22%), Positives = 156/364 (42%), Gaps = 43/364 (11%)
Query: 2 YGKCGSMKDARQVFDAMHLRN----VVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPD 57
+ K G ++ A + F MH R+ V+++T++ISG+ Q G EA ++ +M G PD
Sbjct: 361 FCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPD 420
Query: 58 QLTFGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFT 117
+TF +I C AG + ++H H+I++G ++V
Sbjct: 421 SVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVV----------------------- 457
Query: 118 MISIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPE 177
+++++I G + G A L +M + G+ QPN F S+ + E
Sbjct: 458 --------TYTTLIDGLCKEGDLDSANELLHEMWKIGL-QPNIFTYNSIVNGLCKSGNIE 508
Query: 178 YGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQI----ESPDLVSWNAII 233
++ G GL + + +L D Y K G + A+ ++ P +V++N ++
Sbjct: 509 EAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLM 568
Query: 234 AAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFN 293
F G + + M+ G+ P++ TF SL+ L I+ + G
Sbjct: 569 NGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVG 628
Query: 294 KEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVS---WNAILSACLQHKQAGETFRL 350
+ Y +L+ + K N+ +A +F+ + VS ++ ++ L+ K+ E +
Sbjct: 629 PDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREV 688
Query: 351 FKQM 354
F QM
Sbjct: 689 FDQM 692
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 79/385 (20%), Positives = 161/385 (41%), Gaps = 54/385 (14%)
Query: 219 YQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLI--PDS----ITFLSLLCACT 272
Y+ D ++ D G EA +F +M++ GL+ DS +T LS C T
Sbjct: 168 YKDWGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKT 227
Query: 273 SPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDA---LSVFEAISKNANLV 329
+ + + +VG VA YN ++ + + +A L + E +++
Sbjct: 228 ATAII-----VFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVI 282
Query: 330 SWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFS 389
S++ +++ + + + ++L + M KPN +++G + L +
Sbjct: 283 SYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEM 342
Query: 390 VKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTEN----PNVISWSSLIVGYAMSGLG 445
++ G++ D V LID + K G + A + F + P+V++++++I G+ G
Sbjct: 343 IRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDM 402
Query: 446 HEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSC 505
EA LF +M G+ P+ VT+ +++ G +++ + ++N M
Sbjct: 403 VEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHM--------------- 447
Query: 506 MVDLLARAGCLYEAETFIRKTGFDPDITTWKTLLSSCKTHGNVDIAERAAENILK--LDP 563
+AGC P++ T+ TL+ G++D A + K L P
Sbjct: 448 -----IQAGC-------------SPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQP 489
Query: 564 SNSAALVLLSSIHASAGNWEDVAKL 588
+ +++ + +GN E+ KL
Sbjct: 490 NIFTYNSIVNGL-CKSGNIEEAVKL 513
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 119 bits (297), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 101/491 (20%), Positives = 220/491 (44%), Gaps = 26/491 (5%)
Query: 92 HLVAQNGLISMYTNFGQVAHASDVFTMISIK----DLISWSSMIRGFTQLGYEIEALYLF 147
++ + N +I G++ A + ++ +K D+IS+S+++ G+ + G E++ ++
Sbjct: 245 NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFG-ELDKVWKL 303
Query: 148 RDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAK 207
+++++ +PN ++ GS+ + + + + G++ + +L D + K
Sbjct: 304 IEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCK 363
Query: 208 CGFLPSAKTAFYQIES----PDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSIT 263
G + +A FY++ S PD++++ AII+ F GD EA +F +M GL PDS+T
Sbjct: 364 RGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVT 423
Query: 264 FLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAIS 323
F L+ + ++H+++++ G + V Y +L+ K +L A + +
Sbjct: 424 FTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMW 483
Query: 324 K---NANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLE 380
K N+ ++N+I++ + E +L + + + +T T L+ + ++
Sbjct: 484 KIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMD 543
Query: 381 VGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFD----STENPNVISWSSLI 436
++ + GL + N L++ + G + +++ + PN +++SL+
Sbjct: 544 KAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLV 603
Query: 437 VGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGI 496
Y + A +++ M + GV P+ TY ++ ++E W L+ M+ + G
Sbjct: 604 KQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGK-GF 662
Query: 497 PPAREHFSCMVD-LLARAGCLYEAETF--IRKTGFDPDITTWKTLLSSCKTHGN-----V 548
+ +S ++ L R L E F +R+ G D + S K G V
Sbjct: 663 SVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFD-FFSDTKYKGKRPDTIV 721
Query: 549 DIAERAAENIL 559
D + EN L
Sbjct: 722 DPIDEIIENYL 732
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 102/479 (21%), Positives = 206/479 (43%), Gaps = 37/479 (7%)
Query: 6 GSMKDARQVFDAMHLR----NVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTF 61
G +K+A + M L+ +V+S++++++GY + G+ ++ + M R G P+ +
Sbjct: 260 GRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIY 319
Query: 62 GSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISI 121
GSII C + + + +I+ G V LI + G + AS F +
Sbjct: 320 GSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHS 379
Query: 122 KDL----ISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPE 177
+D+ ++++++I GF Q+G +EA LF +M +G+ +P+ + + +
Sbjct: 380 RDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGL-EPDSVTFTELINGYCKAGHMK 438
Query: 178 YGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIES----PDLVSWNAII 233
++H + G NV + +L D K G L SA +++ P++ ++N+I+
Sbjct: 439 DAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIV 498
Query: 234 AAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFN 293
SG+ EA+ + + GL D++T+ +L+ A +++ +I ++ G
Sbjct: 499 NGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQ 558
Query: 294 KEVALYNSLLTMYTKCSNLHDALSVF-----EAISKNANLVSWNAILSA-CLQHKQAGET 347
+ +N L+ + L D + + I+ NA ++N+++ C+++ T
Sbjct: 559 PTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNAT--TFNSLVKQYCIRNNLKAAT 616
Query: 348 FRLFKQMLFSENKPNMITITNLL-GTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLID 406
++K M P+ T NL+ G C E K G + VS + LI
Sbjct: 617 -AIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGK-GFSVSVSTYSVLIK 674
Query: 407 MYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEV 465
+ K + A+ VFD + + E + F + G RP+ +
Sbjct: 675 GFLKRKKFLEAREVFDQMRREGLAA-------------DKEIFDFFSDTKYKGKRPDTI 720
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/364 (22%), Positives = 156/364 (42%), Gaps = 43/364 (11%)
Query: 2 YGKCGSMKDARQVFDAMHLRN----VVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPD 57
+ K G ++ A + F MH R+ V+++T++ISG+ Q G EA ++ +M G PD
Sbjct: 361 FCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPD 420
Query: 58 QLTFGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFT 117
+TF +I C AG + ++H H+I++G ++V
Sbjct: 421 SVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVV----------------------- 457
Query: 118 MISIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPE 177
+++++I G + G A L +M + G+ QPN F S+ + E
Sbjct: 458 --------TYTTLIDGLCKEGDLDSANELLHEMWKIGL-QPNIFTYNSIVNGLCKSGNIE 508
Query: 178 YGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQI----ESPDLVSWNAII 233
++ G GL + + +L D Y K G + A+ ++ P +V++N ++
Sbjct: 509 EAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLM 568
Query: 234 AAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFN 293
F G + + M+ G+ P++ TF SL+ L I+ + G
Sbjct: 569 NGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVG 628
Query: 294 KEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVS---WNAILSACLQHKQAGETFRL 350
+ Y +L+ + K N+ +A +F+ + VS ++ ++ L+ K+ E +
Sbjct: 629 PDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREV 688
Query: 351 FKQM 354
F QM
Sbjct: 689 FDQM 692
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 79/385 (20%), Positives = 161/385 (41%), Gaps = 54/385 (14%)
Query: 219 YQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLI--PDS----ITFLSLLCACT 272
Y+ D ++ D G EA +F +M++ GL+ DS +T LS C T
Sbjct: 168 YKDWGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKT 227
Query: 273 SPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDA---LSVFEAISKNANLV 329
+ + + +VG VA YN ++ + + +A L + E +++
Sbjct: 228 ATAII-----VFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVI 282
Query: 330 SWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFS 389
S++ +++ + + + ++L + M KPN +++G + L +
Sbjct: 283 SYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEM 342
Query: 390 VKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTEN----PNVISWSSLIVGYAMSGLG 445
++ G++ D V LID + K G + A + F + P+V++++++I G+ G
Sbjct: 343 IRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDM 402
Query: 446 HEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSC 505
EA LF +M G+ P+ VT+ +++ G +++ + ++N M
Sbjct: 403 VEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHM--------------- 447
Query: 506 MVDLLARAGCLYEAETFIRKTGFDPDITTWKTLLSSCKTHGNVDIAERAAENILK--LDP 563
+AGC P++ T+ TL+ G++D A + K L P
Sbjct: 448 -----IQAGC-------------SPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQP 489
Query: 564 SNSAALVLLSSIHASAGNWEDVAKL 588
+ +++ + +GN E+ KL
Sbjct: 490 NIFTYNSIVNGL-CKSGNIEEAVKL 513
>AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10387673-10389100 FORWARD
LENGTH=475
Length = 475
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 135/262 (51%), Gaps = 15/262 (5%)
Query: 317 SVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGT---C 373
+V ++++N + +++++ C+Q G + + + ENK + + LLG C
Sbjct: 77 TVSPSVAQNVTIETFDSL---CIQ----GNWREAVEVLDYLENKGYAMDLIRLLGLAKLC 129
Query: 374 AELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWS 433
+ +LE VH + DV N +I+MY+ C SV A +VF+ N +
Sbjct: 130 GKPEALEAARVVHECIIALVSPCDVGARNAIIEMYSGCCSVDDALKVFEEMPEWNSGTLC 189
Query: 434 SLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEE 493
++ + +G G EA++LF + + G +PN + V S C+ G V+EG + M E
Sbjct: 190 VMMRCFVNNGYGEEAIDLFTRFKEEGNKPNGEIFNQVFSTCTLTGDVKEGSLQFQAMYRE 249
Query: 494 LGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTLLSSCKTHGNVDIAER 553
GI P+ EH+ + +LA +G L EA F+ + +P + W+TL++ + HG+V++ +R
Sbjct: 250 YGIVPSMEHYHSVTKMLATSGHLDEALNFVERMPMEPSVDVWETLMNLSRVHGDVELGDR 309
Query: 554 AAENILKLDPS-----NSAALV 570
AE + KLD + +SA LV
Sbjct: 310 CAELVEKLDATRLDKVSSAGLV 331
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 91/401 (22%), Positives = 165/401 (41%), Gaps = 36/401 (8%)
Query: 219 YQIESPDLVSWNAIIAAFAD---SGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPM 275
Y+ V+ N I F G+ EA+ + + + G D I L L C P
Sbjct: 74 YKTTVSPSVAQNVTIETFDSLCIQGNWREAVEVLDYLENKGYAMDLIRLLGLAKLCGKPE 133
Query: 276 ALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNA-- 333
AL +H I+ + +V N+++ MY+ C ++ DAL VFE + + WN+
Sbjct: 134 ALEAARVVHECIIALVSPCDVGARNAIIEMYSGCCSVDDALKVFEEMPE------WNSGT 187
Query: 334 --ILSACLQHKQAG-ETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGN-QVHCFS 389
++ C + G E LF + NKPN + TC ++ G+ Q
Sbjct: 188 LCVMMRCFVNNGYGEEAIDLFTRFKEEGNKPNGEIFNQVFSTCTLTGDVKEGSLQFQAMY 247
Query: 390 VKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTE-NPNVISWSSLIVGYAMSG---LG 445
+ G+V + + + M A G + A + P+V W +L+ + G LG
Sbjct: 248 REYGIVPSMEHYHSVTKMLATSGHLDEALNFVERMPMEPSVDVWETLMNLSRVHGDVELG 307
Query: 446 HEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSC 505
L K+ R ++V+ G+++ + + +E +T E R S
Sbjct: 308 DRCAELVEKLD--ATRLDKVSSAGLVATKASDFVKKEP----STRSEPYFYSTFRPVDSS 361
Query: 506 MVDLLARAGCLYEAETFIRKTGFDPDITTWKTLLSSCKTHGNV-----DIAERAAENILK 560
+ L + +++ G+ PD +++L+ + + + +IA E++LK
Sbjct: 362 HPQMNIIYETLMSLRSQLKEMGYVPDTRYYRSLIMAMENKEQIFGYREEIA--VVESLLK 419
Query: 561 LDPSNSAALVLLSSIHASAGNWEDVAKLRKVLDDGYDPAQR 601
P +A+ LL++I G+ D+ KL V+ G D +R
Sbjct: 420 SKP--RSAITLLTNIRI-VGDCHDMMKLMSVI-TGRDMIKR 456
>AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11394744-11395973 REVERSE
LENGTH=409
Length = 409
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 140/282 (49%), Gaps = 6/282 (2%)
Query: 79 QLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIKDLISWSSMIRGFTQLG 138
+L H++KS + N L+ M+ + G++ +F + +D SW+ + G ++G
Sbjct: 109 ELQVHIMKSSIRPTITFINRLLLMHVSCGRLDITRQMFDRMPHRDFHSWAIVFLGCIEMG 168
Query: 139 YEIEALYLFRDMLR---QGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLV--R 193
+A +LF ML+ +G ++ ++LG V AC+ + + E G+Q+H +C K G +
Sbjct: 169 DYEDAAFLFVSMLKHSQKGAFKIPSWILGCVLKACAMIRDFELGKQVHALCHKLGFIDEE 228
Query: 194 NVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMM 253
+ + SL Y + L A +Q+ + + V+W A + G+ E I F +M
Sbjct: 229 DSYLSGSLIRFYGEFRCLEDANLVLHQLSNANTVAWAAKVTNDYREGEFQEVIRDFIEMG 288
Query: 254 HIGLIPDSITFLSLLCACT-SPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNL 312
+ G+ + F ++L AC+ G Q+H+ +K+GF + + L+ MY K +
Sbjct: 289 NHGIKKNVSVFSNVLKACSWVSDGGRSGQQVHANAIKLGFESDCLIRCRLIEMYGKYGKV 348
Query: 313 HDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQM 354
DA VF++ ++ WNA++++ +Q+ E +L QM
Sbjct: 349 KDAEKVFKSSKDETSVSCWNAMVASYMQNGIYIEAIKLLYQM 390
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 123/265 (46%), Gaps = 9/265 (3%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQML----RSGFFP 56
M+ CG + RQ+FD M R+ SW + G + G +A +++ ML + F
Sbjct: 132 MHVSCGRLDITRQMFDRMPHRDFHSWAIVFLGCIEMGDYEDAAFLFVSMLKHSQKGAFKI 191
Query: 57 DQLTFGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVA--QNGLISMYTNFGQVAHASD 114
G ++KAC + D LG+Q+HA K GF + LI Y F + A+
Sbjct: 192 PSWILGCVLKACAMIRDFELGKQVHALCHKLGFIDEEDSYLSGSLIRFYGEFRCLEDANL 251
Query: 115 VFTMISIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLL 174
V +S + ++W++ + + G E + F +M G+ + N V +V ACS +
Sbjct: 252 VLHQLSNANTVAWAAKVTNDYREGEFQEVIRDFIEMGNHGI-KKNVSVFSNVLKACSWVS 310
Query: 175 E-PEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVS-WNAI 232
+ G+Q+H K G + C L +MY K G + A+ F + VS WNA+
Sbjct: 311 DGGRSGQQVHANAIKLGFESDCLIRCRLIEMYGKYGKVKDAEKVFKSSKDETSVSCWNAM 370
Query: 233 IAAFADSGDANEAISIFRQMMHIGL 257
+A++ +G EAI + QM G+
Sbjct: 371 VASYMQNGIYIEAIKLLYQMKATGI 395
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 128/271 (47%), Gaps = 11/271 (4%)
Query: 204 MYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGL-----I 258
M+ CG L + F ++ D SW + + GD +A +F M+ I
Sbjct: 132 MHVSCGRLDITRQMFDRMPHRDFHSWAIVFLGCIEMGDYEDAAFLFVSMLKHSQKGAFKI 191
Query: 259 PDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALY--NSLLTMYTKCSNLHDAL 316
P S +L AC G Q+H+ K+GF E Y SL+ Y + L DA
Sbjct: 192 P-SWILGCVLKACAMIRDFELGKQVHALCHKLGFIDEEDSYLSGSLIRFYGEFRCLEDAN 250
Query: 317 SVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAEL 376
V +S NAN V+W A ++ + + E R F +M K N+ +N+L C+ +
Sbjct: 251 LVLHQLS-NANTVAWAAKVTNDYREGEFQEVIRDFIEMGNHGIKKNVSVFSNVLKACSWV 309
Query: 377 ASL-EVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVIS-WSS 434
+ G QVH ++K G D + LI+MY K G V A++VF S+++ +S W++
Sbjct: 310 SDGGRSGQQVHANAIKLGFESDCLIRCRLIEMYGKYGKVKDAEKVFKSSKDETSVSCWNA 369
Query: 435 LIVGYAMSGLGHEALNLFRKMRNLGVRPNEV 465
++ Y +G+ EA+ L +M+ G++ ++
Sbjct: 370 MVASYMQNGIYIEAIKLLYQMKATGIKAHDT 400
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 111/272 (40%), Gaps = 9/272 (3%)
Query: 281 MQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQ 340
+Q+H I+K + N LL M+ C L +F+ + + + SW + C++
Sbjct: 110 LQVH--IMKSSIRPTITFINRLLLMHVSCGRLDITRQMFDRMP-HRDFHSWAIVFLGCIE 166
Query: 341 HKQAGETFRLFKQMLFSENKPNMITITNLLG----TCAELASLEVGNQVHCFSVKSGLV- 395
+ LF ML K + +LG CA + E+G QVH K G +
Sbjct: 167 MGDYEDAAFLFVSMLKHSQKGAFKIPSWILGCVLKACAMIRDFELGKQVHALCHKLGFID 226
Query: 396 -LDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRK 454
D +S LI Y + + A V N N ++W++ + G E + F +
Sbjct: 227 EEDSYLSGSLIRFYGEFRCLEDANLVLHQLSNANTVAWAAKVTNDYREGEFQEVIRDFIE 286
Query: 455 MRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAG 514
M N G++ N + VL ACS + + +LG ++++ + G
Sbjct: 287 MGNHGIKKNVSVFSNVLKACSWVSDGGRSGQQVHANAIKLGFESDCLIRCRLIEMYGKYG 346
Query: 515 CLYEAETFIRKTGFDPDITTWKTLLSSCKTHG 546
+ +AE + + + ++ W +++S +G
Sbjct: 347 KVKDAEKVFKSSKDETSVSCWNAMVASYMQNG 378
>AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15661092-15662705 FORWARD
LENGTH=537
Length = 537
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 119/223 (53%), Gaps = 5/223 (2%)
Query: 342 KQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVS 401
K+A E + ++ + + P + I L C + +L+ VH F S + D+S
Sbjct: 163 KKAVEIIKSWRNEGYVVDLPRLFWIAQL---CGDAQALQEAKVVHEFITSSVGISDISAY 219
Query: 402 NGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVR 461
N +I+MY+ CGSV A VF+S N+ +W +I +A +G G +A++ F + + G +
Sbjct: 220 NSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFSRFKQEGNK 279
Query: 462 PNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAET 521
P+ + + AC +G + EG + +M +E GI P EH+ +V +LA G L EA
Sbjct: 280 PDGEMFKEIFFACGVLGDMNEGLLHFESMYKEYGIIPCMEHYVSLVKMLAEPGYLDEALR 339
Query: 522 FIRKTGFDPDITTWKTLLSSCKTHGNVDIAERAAENILKLDPS 564
F+ +P++ W+TL++ + HG++ + +R + + +LD S
Sbjct: 340 FVES--MEPNVDLWETLMNLSRVHGDLILGDRCQDMVEQLDAS 380
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 91/199 (45%), Gaps = 5/199 (2%)
Query: 240 GDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALY 299
G +A+ I + + G + D + C AL + +H +I +++ Y
Sbjct: 160 GKVKKAVEIIKSWRNEGYVVDLPRLFWIAQLCGDAQALQEAKVVHEFITSSVGISDISAY 219
Query: 300 NSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSEN 359
NS++ MY+ C ++ DAL+VF ++ + NL +W ++ ++ Q + F + N
Sbjct: 220 NSIIEMYSGCGSVEDALTVFNSMPER-NLETWCGVIRCFAKNGQGEDAIDTFSRFKQEGN 278
Query: 360 KPNMITITNLLGTCAELASLEVGNQVHCFSV--KSGLVLDVSVSNGLIDMYAKCGSVIHA 417
KP+ + C L + G +H S+ + G++ + L+ M A+ G + A
Sbjct: 279 KPDGEMFKEIFFACGVLGDMNEG-LLHFESMYKEYGIIPCMEHYVSLVKMLAEPGYLDEA 337
Query: 418 QRVFDSTENPNVISWSSLI 436
R +S E PNV W +L+
Sbjct: 338 LRFVESME-PNVDLWETLM 355
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
MY CGS++DA VF++M RN+ +W +I +++NGQG +A+ + + + G PD
Sbjct: 225 MYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFSRFKQEGNKPDGEM 284
Query: 61 FGSIIKACCIAGDIYLG 77
F I AC + GD+ G
Sbjct: 285 FKEIFFACGVLGDMNEG 301
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 65/143 (45%), Gaps = 3/143 (2%)
Query: 200 SLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIP 259
S+ +MY+ CG + A T F + +L +W +I FA +G +AI F + G P
Sbjct: 221 SIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFSRFKQEGNKP 280
Query: 260 DSITFLSLLCACTSPMALNQG-MQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSV 318
D F + AC +N+G + S + G + Y SL+ M + L +AL
Sbjct: 281 DGEMFKEIFFACGVLGDMNEGLLHFESMYKEYGIIPCMEHYVSLVKMLAEPGYLDEALRF 340
Query: 319 FEAISKNANLVSWNAILSACLQH 341
E++ N +L W +++ H
Sbjct: 341 VESMEPNVDL--WETLMNLSRVH 361
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 89/208 (42%), Gaps = 3/208 (1%)
Query: 35 QNGQGNEAVVMYIQMLRSGFFPDQLTFGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLV 94
+ G+ +AV + G+ D I + C A + + +H + S +
Sbjct: 158 REGKVKKAVEIIKSWRNEGYVVDLPRLFWIAQLCGDAQALQEAKVVHEFITSSVGISDIS 217
Query: 95 AQNGLISMYTNFGQVAHASDVFTMISIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQG 154
A N +I MY+ G V A VF + ++L +W +IR F + G +A+ F ++G
Sbjct: 218 AYNSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFSRFKQEG 277
Query: 155 VYQPNEFVLGSVFSACSSLLEPEYG-RQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPS 213
+P+ + +F AC L + G + ++G++ + SL M A+ G+L
Sbjct: 278 -NKPDGEMFKEIFFACGVLGDMNEGLLHFESMYKEYGIIPCMEHYVSLVKMLAEPGYLDE 336
Query: 214 AKTAFYQIESPDLVSWNAIIAAFADSGD 241
A F + P++ W ++ GD
Sbjct: 337 A-LRFVESMEPNVDLWETLMNLSRVHGD 363
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 108/483 (22%), Positives = 212/483 (43%), Gaps = 47/483 (9%)
Query: 22 NVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTFGSIIKACCIAGDIYLGRQLH 81
++V+ +S+++GY + + ++AV + QM+ G+ PD TF ++I + L
Sbjct: 152 DIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALV 211
Query: 82 AHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISI----KDLISWSSMIRGFTQL 137
+++ G LV +++ G + A + + D++ ++++I G +
Sbjct: 212 DQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKY 271
Query: 138 GYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFS 197
+ +AL LF +M +G+ +P+ F S+ S + YGR +S
Sbjct: 272 KHMDDALNLFTEMDNKGI-RPDVFTYSSLISCLCN-----YGR---------------WS 310
Query: 198 GCS--LCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHI 255
S L DM + +I +P++V+++A+I AF G EA ++ +M+
Sbjct: 311 DASRLLSDMIER------------KI-NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 357
Query: 256 GLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDA 315
+ PD T+ SL+ L++ + ++ V Y++L+ + K + +
Sbjct: 358 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEG 417
Query: 316 LSVFEAISKNA---NLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGT 372
+ +F +S+ N V++ ++ Q + +FKQM+ PN++T LL
Sbjct: 418 MELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDG 477
Query: 373 CAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTE----NPN 428
+ L V + +S + D+ N +I+ K G V +F + +PN
Sbjct: 478 LCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPN 537
Query: 429 VISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYN 488
VI+++++I G+ G EA +L +KM+ G PN TY ++ A G E L
Sbjct: 538 VIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIK 597
Query: 489 TME 491
M
Sbjct: 598 EMR 600
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 108/503 (21%), Positives = 215/503 (42%), Gaps = 58/503 (11%)
Query: 3 GKCGSMK--DARQVFDAM----HLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFP 56
G C S + DA + D M + + ++T++I G + + +EAV + QM++ G P
Sbjct: 162 GYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQP 221
Query: 57 DQLTFGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVF 116
D +T+G+++ C GDI L L + K +V N +I + + A ++F
Sbjct: 222 DLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLF 281
Query: 117 TMISIK----DLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSAC-- 170
T + K D+ ++SS+I G +A L DM+ + + PN ++ A
Sbjct: 282 TEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKI-NPNVVTFSALIDAFVK 340
Query: 171 -SSLLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIES----PD 225
L+E E +++ K + ++F+ SL + + L AK F + S P+
Sbjct: 341 EGKLVEAE---KLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN 397
Query: 226 LVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHS 285
+V+++ +I F + E + +FR+M GL+ +++T+ +L+ + +
Sbjct: 398 VVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFK 457
Query: 286 YIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAG 345
+V VG + + YN LL K L A+ VFE + +
Sbjct: 458 QMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQR--------------------- 496
Query: 346 ETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLI 405
S +P++ T ++ + +E G ++ C G+ +V N +I
Sbjct: 497 -----------STMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMI 545
Query: 406 DMYAKCGSVIHAQRVFDSTEN----PNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVR 461
+ + GS A + + PN ++++LI G + L ++MR+ G
Sbjct: 546 SGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGF- 604
Query: 462 PNEVTYVGVLSACSHIGLVEEGW 484
+ + +G+++ H G +++ +
Sbjct: 605 AGDASTIGLVTNMLHDGRLDKSF 627
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 111/531 (20%), Positives = 233/531 (43%), Gaps = 20/531 (3%)
Query: 22 NVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTFGSIIKACCIAGDIYLGRQLH 81
++V + ++S ++ + + + QM G D T+ I C + L +
Sbjct: 82 SIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVL 141
Query: 82 AHVIKSGFGGHLVAQNGLISMYTNFGQVAHA----SDVFTMISIKDLISWSSMIRGFTQL 137
A ++K G+ +V + L++ Y + +++ A + M D +++++I G
Sbjct: 142 AKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLH 201
Query: 138 GYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFS 197
EA+ L M+++G QP+ G+V + + + + K + +V
Sbjct: 202 NKASEAVALVDQMVQRGC-QPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVI 260
Query: 198 GCSLCDMYAKCGFLPSAKTAFYQIES----PDLVSWNAIIAAFADSGDANEAISIFRQMM 253
++ D K + A F ++++ PD+ +++++I+ + G ++A + M+
Sbjct: 261 YNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMI 320
Query: 254 HIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLH 313
+ P+ +TF +L+ A L + +++ ++K + ++ Y+SL+ + L
Sbjct: 321 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 380
Query: 314 DALSVFE-AISKN--ANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLL 370
+A +FE ISK+ N+V+++ ++ + K+ E LF++M N +T T L+
Sbjct: 381 EAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLI 440
Query: 371 GTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFD----STEN 426
+ + V V G+ ++ N L+D K G + A VF+ ST
Sbjct: 441 HGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTME 500
Query: 427 PNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNL 486
P++ +++ +I G +G + LF + GV PN + Y ++S G EE +L
Sbjct: 501 PDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSL 560
Query: 487 YNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFI---RKTGFDPDITT 534
M+E+ G P ++ ++ R G + I R GF D +T
Sbjct: 561 LKKMKED-GPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDAST 610
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/421 (20%), Positives = 190/421 (45%), Gaps = 46/421 (10%)
Query: 224 PDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQI 283
PD+V+ ++++ + S ++A+++ QM+ +G PD+ TF +L+ ++ + +
Sbjct: 151 PDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVAL 210
Query: 284 HSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISK---NANLVSWNAILSACLQ 340
+V+ G ++ Y +++ K ++ ALS+ + + K A++V +N I+ +
Sbjct: 211 VDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCK 270
Query: 341 HKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSV 400
+K + LF +M +P++ T ++L+ +++ ++ + +V
Sbjct: 271 YKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVT 330
Query: 401 SNGLIDMYAKCGSVIHAQRVFDS----TENPNVISWSSLIVGYAMSGLGHEALNLFRKMR 456
+ LID + K G ++ A++++D + +P++ ++SSLI G+ M EA ++F M
Sbjct: 331 FSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMI 390
Query: 457 NLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEE----------------------- 493
+ PN VTY ++ VEEG L+ M +
Sbjct: 391 SKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCD 450
Query: 494 -----------LGIPPAREHFSCMVDLLARAGCLYEAET---FIRKTGFDPDITTWKTLL 539
+G+ P ++ ++D L + G L +A +++++ +PDI T+ ++
Sbjct: 451 NAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMI 510
Query: 540 SSCKTHGNVDIAERAAENI-LK-LDPSNSAALVLLSSIHASAGNWEDVAKLRKVLDDGYD 597
G V+ N+ LK + P+ A ++S E + L+K+ +DG
Sbjct: 511 EGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPL 570
Query: 598 P 598
P
Sbjct: 571 P 571
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 79/335 (23%), Positives = 150/335 (44%), Gaps = 20/335 (5%)
Query: 224 PDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITF-LSLLCACTSPMALNQGMQ 282
P +V +N +++A A IS+ QM +G+ D T+ + + C C L+ +
Sbjct: 81 PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRS-QLSLALA 139
Query: 283 IHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISK---NANLVSWNAILSACL 339
+ + ++K+G+ ++ +SLL Y + DA+++ + + + + ++ ++
Sbjct: 140 VLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLF 199
Query: 340 QHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVS 399
H +A E L QM+ +P+++T ++ + +++ + K + DV
Sbjct: 200 LHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVV 259
Query: 400 VSNGLIDMYAKCGSVIHAQRVFDSTEN----PNVISWSSLIVGYAMSGLGHEALNLFRKM 455
+ N +ID K + A +F +N P+V ++SSLI G +A L M
Sbjct: 260 IYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDM 319
Query: 456 RNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFS------CMVDL 509
+ PN VT+ ++ A G + E LY+ M + I P +S CM D
Sbjct: 320 IERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR-SIDPDIFTYSSLINGFCMHDR 378
Query: 510 LARAGCLYEAETFIRKTGFDPDITTWKTLLSS-CK 543
L A ++ E I K F P++ T+ TL+ CK
Sbjct: 379 LDEAKHMF--ELMISKDCF-PNVVTYSTLIKGFCK 410
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 102/467 (21%), Positives = 205/467 (43%), Gaps = 16/467 (3%)
Query: 22 NVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTFGSIIKACCIAGDIYLGRQLH 81
N+ +++ +I+ + + Q + A+ + +M++ G+ PD +T S++ C I L
Sbjct: 115 NLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLV 174
Query: 82 AHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIK----DLISWSSMIRGFTQL 137
+++ G+ N LI + + A + + +K DL+++ ++ G +
Sbjct: 175 GQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKR 234
Query: 138 GYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFS 197
G AL L + M QG +P + ++ A + + G+ NV +
Sbjct: 235 GDIDLALSLLKKM-EQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVT 293
Query: 198 GCSLCDMYAKCGFLPSAKTAFYQ-IE---SPDLVSWNAIIAAFADSGDANEAISIFRQMM 253
SL G A IE +P++V+++A+I AF G EA ++ +M+
Sbjct: 294 YNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI 353
Query: 254 HIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLH 313
+ PD T+ SL+ L++ + ++ V YN+L+ + K +
Sbjct: 354 KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVD 413
Query: 314 DALSVFEAISKNA---NLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLL 370
+ + +F +S+ N V++ ++ Q ++ +FKQM+ P+++T + LL
Sbjct: 414 EGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILL 473
Query: 371 GTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTE----N 426
+E V + +S + D+ N +I+ K G V +F S
Sbjct: 474 DGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVK 533
Query: 427 PNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSA 473
PNV+++++++ G+ GL EA LFR+M+ G P+ TY ++ A
Sbjct: 534 PNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRA 580
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/346 (22%), Positives = 156/346 (45%), Gaps = 40/346 (11%)
Query: 224 PDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLL-CACTSPMALNQGMQ 282
P +V ++ +++A A + IS+ QM ++G+ + T+ L+ C C L+ +
Sbjct: 79 PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRS-QLSLALA 137
Query: 283 IHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISK---NANLVSWNAILSACL 339
+ + ++K+G+ ++ NSLL + + + DA+S+ + + + ++N ++
Sbjct: 138 VLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLF 197
Query: 340 QHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVS 399
+H +A E L +M+ +P+++T G+V++
Sbjct: 198 RHNRASEAVALVDRMVVKGCQPDLVTY--------------------------GIVVNGL 231
Query: 400 VSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLG 459
G ID+ + ++ P V+ ++++I ++ALNLF +M N G
Sbjct: 232 CKRGDIDLALSLLKKMEQGKI-----EPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKG 286
Query: 460 VRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEA 519
+RPN VTY ++ + G + L + M E I P FS ++D + G L EA
Sbjct: 287 IRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIER-KINPNVVTFSALIDAFVKEGKLVEA 345
Query: 520 ETF---IRKTGFDPDITTWKTLLSSCKTHGNVDIAERAAENILKLD 562
E + K DPDI T+ +L++ H +D A+ E ++ D
Sbjct: 346 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 391
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/274 (21%), Positives = 128/274 (46%), Gaps = 13/274 (4%)
Query: 2 YGKCGSMKDARQVFDAMHLR----NVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPD 57
+ K G + +A +++D M R ++ +++S+I+G+ + + +EA M+ M+ FP+
Sbjct: 336 FVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN 395
Query: 58 QLTFGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFT 117
+T+ ++IK C A + G +L + + G G+ V LI + + +A VF
Sbjct: 396 VVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFK 455
Query: 118 -MIS---IKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSL 173
M+S + D++++S ++ G G AL +F + L++ +P+ + +
Sbjct: 456 QMVSDGVLPDIMTYSILLDGLCNNGKVETALVVF-EYLQRSKMEPDIYTYNIMIEGMCKA 514
Query: 174 LEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIES----PDLVSW 229
+ E G + + G+ NV + ++ + + G A F +++ PD ++
Sbjct: 515 GKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTY 574
Query: 230 NAIIAAFADSGDANEAISIFRQMMHIGLIPDSIT 263
N +I A GD + + R+M + D+ T
Sbjct: 575 NTLIRAHLRDGDKAASAELIREMRSCRFVGDAST 608
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 115 bits (289), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 111/516 (21%), Positives = 229/516 (44%), Gaps = 21/516 (4%)
Query: 21 RNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTFGSIIKACCIAGDIYLGRQL 80
R ++ ++I Y + G+ N+A ++ +ML+SG D +TF ++I C G + L
Sbjct: 303 RLTSTFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESL 362
Query: 81 HAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMIS----IKDLISWSSMIRGFTQ 136
+ + G N L+S++ + G + A + + I D ++ +++ Q
Sbjct: 363 LKKMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQ 422
Query: 137 LGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGL--VRN 194
E + +M R + SV + Q + +F L V +
Sbjct: 423 RKMVAEVEAVIAEMDRNSIRIDEH----SVPVIMQMYVNEGLVVQAKALFERFQLDCVLS 478
Query: 195 VFSGCSLCDMYAKCGFLPSAKTAFY-----QIESPDLVSWNAIIAAFADSGDANEAISIF 249
+ ++ D+YA+ G A+T FY + D++ +N +I A+ + +A+S+F
Sbjct: 479 STTLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLF 538
Query: 250 RQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKC 309
+ M + G PD T+ SL +++ +I + ++ G Y +++ Y +
Sbjct: 539 KGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRL 598
Query: 310 SNLHDALSVFEAISK---NANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITI 366
L DA+ ++EA+ K N V + ++++ + E + F+ M + N I +
Sbjct: 599 GLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVL 658
Query: 367 TNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTEN 426
T+L+ +++ LE +V+ S DV+ SN ++ + A G V A+ +F++
Sbjct: 659 TSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIFNALRE 718
Query: 427 P---NVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEG 483
+VIS+++++ Y G+ EA+ + +MR G+ + ++ V++ + G + E
Sbjct: 719 KGTCDVISFATMMYLYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQVMACYAADGQLSEC 778
Query: 484 WNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEA 519
L++ M E + F + LL + G EA
Sbjct: 779 CELFHEMLVERKLLLDWGTFKTLFTLLKKGGVPSEA 814
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 133/626 (21%), Positives = 256/626 (40%), Gaps = 102/626 (16%)
Query: 19 HLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTFGSIIKACCIAGDI---- 74
++ NV+ + ++ + G+ +E + +I+M +G P T+G ++ AG +
Sbjct: 141 YVPNVIHYNIVLRALGRAGKWDELRLCWIEMAHNGVLPTNNTYGMLVDVYGKAGLVKEAL 200
Query: 75 ----YLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFT----------MIS 120
++G+++H F V ++ ++ N G+ A F + S
Sbjct: 201 LWIKHMGQRMH-------FPDE-VTMATVVRVFKNSGEFDRADRFFKGWCAGKVDLDLDS 252
Query: 121 IKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGR 180
I D G Q ++ +L ++ + G P E L + SS +P
Sbjct: 253 IDDFPK-----NGSAQSPVNLKQ-FLSMELFKVGARNPIEKSLHFASGSDSSPRKPRLTS 306
Query: 181 ------QIHGICAKFGLVRNVFS----------GCSLCDMYAKCG---FLPSAKTAFYQI 221
++G + N+FS + M CG L A++ ++
Sbjct: 307 TFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKM 366
Query: 222 E----SPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSIT---FLSLLC----- 269
E SPD ++N +++ AD+GD A+ +R++ +GL PD++T L +LC
Sbjct: 367 EEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMV 426
Query: 270 ----------------------ACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLT--- 304
M +N+G+ + + + F + L ++ L
Sbjct: 427 AEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSSTTLAAVI 486
Query: 305 -MYTKCSNLHDALSVF----EAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSEN 359
+Y + +A +VF + +++ +N ++ A + K + LFK M
Sbjct: 487 DVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGT 546
Query: 360 KPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQR 419
P+ T +L A + ++ ++ + SG +I Y + G + A
Sbjct: 547 WPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVD 606
Query: 420 VFDSTEN----PNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACS 475
++++ E PN + + SLI G+A SG+ EA+ FR M GV+ N + ++ A S
Sbjct: 607 LYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYS 666
Query: 476 HIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETF---IRKTGFDPDI 532
+G +EE +Y+ M++ G P S M+ L A G + EAE+ +R+ G D+
Sbjct: 667 KVGCLEEARRVYDKMKDSEGGPDVAASNS-MLSLCADLGIVSEAESIFNALREKG-TCDV 724
Query: 533 TTWKTLLSSCKTHGNVDIAERAAENI 558
++ T++ K G +D A AE +
Sbjct: 725 ISFATMMYLYKGMGMLDEAIEVAEEM 750
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 131/306 (42%), Gaps = 44/306 (14%)
Query: 2 YGKCGSMKDARQVFDAMHLR----NVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPD 57
Y + G + DA +++AM N V + S+I+G++++G EA+ + M G +
Sbjct: 595 YVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSN 654
Query: 58 QLTFGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFT 117
+ S+IKA G + R+++ + S G + A N ++S+ + G V+ A +F
Sbjct: 655 HIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIFN 714
Query: 118 MISIK---DLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQP----NE----FVLGSV 166
+ K D+IS+++M+ + +G EA+ + +M G+ N+ +
Sbjct: 715 ALREKGTCDVISFATMMYLYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQVMACYAADGQ 774
Query: 167 FSACSSLLEP---------EYG--RQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAK 215
S C L ++G + + + K G+ S AK P+
Sbjct: 775 LSECCELFHEMLVERKLLLDWGTFKTLFTLLKKGGVPSEAVSQLQTAYNEAKPLATPAIT 834
Query: 216 TAF--------YQIES-PDLVS---------WNAIIAAFADSGDANEAISIFRQMMHIGL 257
Y +ES +L S +NA+I ++ SGD + A+ + +M GL
Sbjct: 835 ATLFSAMGLYAYALESCQELTSGEIPREHFAYNAVIYTYSASGDIDMALKAYMRMQEKGL 894
Query: 258 IPDSIT 263
PD +T
Sbjct: 895 EPDIVT 900
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 115 bits (288), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 116/486 (23%), Positives = 216/486 (44%), Gaps = 64/486 (13%)
Query: 22 NVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTFGSIIKACCIAGDIYLGRQLH 81
N ++++++I+G G+ +EA+ + +M+ G PD +T +++ C++G L
Sbjct: 157 NTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLI 216
Query: 82 AHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIK----DLISWSSMIRGFTQL 137
+++ G + V ++++ GQ A A ++ + + D + +S +I G +
Sbjct: 217 DKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKH 276
Query: 138 GYEIEALYLFRDMLRQGVYQ---PNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRN 194
G A LF +M +G+ ++G +A GR G AK
Sbjct: 277 GSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNA---------GRWDDG--AKL----- 320
Query: 195 VFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMH 254
L DM + +I +P++V+++ +I +F G EA + ++M+H
Sbjct: 321 ------LRDMIKR------------KI-NPNVVTFSVLIDSFVKEGKLREAEELHKEMIH 361
Query: 255 IGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHD 314
G+ PD+IT+ SL+ L++ Q+ +V G + + +N L+ Y K + + D
Sbjct: 362 RGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDD 421
Query: 315 ALSVFEAISKN---ANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLL- 370
L +F +S A+ V++N ++ + + LF++M+ + PN++T LL
Sbjct: 422 GLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLD 481
Query: 371 GTCAELAS---LEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTE-- 425
G C S LE+ ++ KS + LD+ + N +I V A +F S
Sbjct: 482 GLCDNGESEKALEIFEKIE----KSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLK 537
Query: 426 --NPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTY-------VGVLSACSH 476
P V +++ +I G G EA LFRKM G P+ TY +G A
Sbjct: 538 GVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKS 597
Query: 477 IGLVEE 482
+ L+EE
Sbjct: 598 VKLIEE 603
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/342 (21%), Positives = 153/342 (44%), Gaps = 17/342 (4%)
Query: 223 SPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITF---LSLLCACTSPMALNQ 279
PDL++ N ++ SG EA+ + +M+ G P+++T+ L+++C + AL
Sbjct: 190 KPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCK-SGQTAL-- 246
Query: 280 GMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKN---ANLVSWNAILS 336
M++ + + + Y+ ++ K +L +A ++F + N++++N ++
Sbjct: 247 AMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIG 306
Query: 337 ACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVL 396
+ + +L + M+ + PN++T + L+ + + L ++H + G+
Sbjct: 307 GFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAP 366
Query: 397 DVSVSNGLIDMYAKCGSVIHAQRVFD----STENPNVISWSSLIVGYAMSGLGHEALNLF 452
D LID + K + A ++ D +PN+ +++ LI GY + + L LF
Sbjct: 367 DTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELF 426
Query: 453 RKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLAR 512
RKM GV + VTY ++ +G + L+ M +PP + ++D L
Sbjct: 427 RKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSR-KVPPNIVTYKILLDGLCD 485
Query: 513 AGCLYEA-ETF--IRKTGFDPDITTWKTLLSSCKTHGNVDIA 551
G +A E F I K+ + DI + ++ VD A
Sbjct: 486 NGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDA 527
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 76/354 (21%), Positives = 128/354 (36%), Gaps = 70/354 (19%)
Query: 242 ANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNS 301
A++AI +FR M+H +P I F L A + + + + G + +
Sbjct: 69 ADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSI 128
Query: 302 LLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKP 361
++ + +C L CL G+ +L + P
Sbjct: 129 MINCFCRCRKL-------------------------CLAFSAMGKIIKLGYE-------P 156
Query: 362 NMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVF 421
N IT + L+ +GL L+ VS L R+
Sbjct: 157 NTITFSTLI---------------------NGLCLEGRVSEALE----------LVDRMV 185
Query: 422 DSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVE 481
+ P++I+ ++L+ G +SG EA+ L KM G +PN VTY VL+ G
Sbjct: 186 EMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTA 245
Query: 482 EGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRK---TGFDPDITTWKTL 538
L MEE I +S ++D L + G L A + G +I T+ L
Sbjct: 246 LAMELLRKMEER-NIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNIL 304
Query: 539 LSSCKTHGNVDIAERAAENIL--KLDPSNSAALVLLSSIHASAGNWEDVAKLRK 590
+ G D + +++ K++P+ VL+ S G + +L K
Sbjct: 305 IGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSF-VKEGKLREAEELHK 357
>AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:10888102-10889949 FORWARD
LENGTH=615
Length = 615
Score = 115 bits (288), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 109/203 (53%)
Query: 362 NMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVF 421
++ + L C E L+ VH S LD+S ++ L++MY+ CG A VF
Sbjct: 253 DLSRLLRLAKICGEAEGLQEAKTVHGKISASVSHLDLSSNHVLLEMYSNCGLANEAASVF 312
Query: 422 DSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVE 481
+ N+ +W +I +A +G G +A+++F + + G P+ + G+ AC +G V+
Sbjct: 313 EKMSEKNLETWCIIIRCFAKNGFGEDAIDMFSRFKEEGNIPDGQLFRGIFYACGMLGDVD 372
Query: 482 EGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTLLSS 541
EG + +M + GI P+ E + +V++ A G L EA F+ + +P++ W+TL++
Sbjct: 373 EGLLHFESMSRDYGIAPSIEDYVSLVEMYALPGFLDEALEFVERMPMEPNVDVWETLMNL 432
Query: 542 CKTHGNVDIAERAAENILKLDPS 564
+ HGN+++ + AE + LDP+
Sbjct: 433 SRVHGNLELGDYCAEVVEFLDPT 455
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 63/142 (44%), Gaps = 1/142 (0%)
Query: 201 LCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPD 260
L +MY+ CG A + F ++ +L +W II FA +G +AI +F + G IPD
Sbjct: 295 LLEMYSNCGLANEAASVFEKMSEKNLETWCIIIRCFAKNGFGEDAIDMFSRFKEEGNIPD 354
Query: 261 SITFLSLLCACTSPMALNQG-MQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVF 319
F + AC +++G + S G + Y SL+ MY L +AL
Sbjct: 355 GQLFRGIFYACGMLGDVDEGLLHFESMSRDYGIAPSIEDYVSLVEMYALPGFLDEALEFV 414
Query: 320 EAISKNANLVSWNAILSACLQH 341
E + N+ W +++ H
Sbjct: 415 ERMPMEPNVDVWETLMNLSRVH 436
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 80/172 (46%), Gaps = 3/172 (1%)
Query: 64 IIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIKD 123
+ K C A + + +H + S L + + L+ MY+N G A+ VF +S K+
Sbjct: 260 LAKICGEAEGLQEAKTVHGKISASVSHLDLSSNHVLLEMYSNCGLANEAASVFEKMSEKN 319
Query: 124 LISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYG-RQI 182
L +W +IR F + G+ +A+ +F +G P+ + +F AC L + + G
Sbjct: 320 LETWCIIIRCFAKNGFGEDAIDMFSRFKEEGNI-PDGQLFRGIFYACGMLGDVDEGLLHF 378
Query: 183 HGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIE-SPDLVSWNAII 233
+ +G+ ++ SL +MYA GFL A ++ P++ W ++
Sbjct: 379 ESMSRDYGIAPSIEDYVSLVEMYALPGFLDEALEFVERMPMEPNVDVWETLM 430
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
MY CG +A VF+ M +N+ +W +I +++NG G +A+ M+ + G PD
Sbjct: 298 MYSNCGLANEAASVFEKMSEKNLETWCIIIRCFAKNGFGEDAIDMFSRFKEEGNIPDGQL 357
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSGFG 90
F I AC + GD+ G LH + +G
Sbjct: 358 FRGIFYACGMLGDVDEG-LLHFESMSRDYG 386
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 123/594 (20%), Positives = 229/594 (38%), Gaps = 76/594 (12%)
Query: 2 YGKCGSMKDARQVFDAMHL----RNVVSWTSMISGYSQNGQGNEAVVMYIQMLRS-GFFP 56
Y + G + A +F+ M +V++ ++ + + G+ ++ + +RS G
Sbjct: 220 YSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKF 279
Query: 57 DQLTFGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVF 116
D+ T +++ AC G + ++ A + G+ V N L+ ++ G A V
Sbjct: 280 DEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVL 339
Query: 117 TMIS----IKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSS 172
+ D ++++ ++ + + G+ EA + M ++GV PN +V A
Sbjct: 340 KEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGV-MPNAITYTTVIDAYGK 398
Query: 173 LLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIE---------- 222
+ + ++ + G V N C A L + I+
Sbjct: 399 AGKEDEALKLFYSMKEAGCVPNT------CTYNAVLSLLGKKSRSNEMIKMLCDMKSNGC 452
Query: 223 SPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQ 282
SP+ +WN ++A + G +FR+M G PD TF +L+ A + +
Sbjct: 453 SPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASK 512
Query: 283 IHSYIVKVGFNKEVALYNSLLTM-----------------------------------YT 307
++ + + GFN V YN+LL Y
Sbjct: 513 MYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYA 572
Query: 308 KCSNLHDALSVFEAISKNANLVSWNAILS------ACLQHKQAGETFRLFKQMLFSENKP 361
K N + I + SW + + C + F LFK+ + KP
Sbjct: 573 KGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGY---KP 629
Query: 362 NMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVF 421
+M+ ++L + + + GL D+ N L+DMY + G A+ +
Sbjct: 630 DMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEIL 689
Query: 422 DSTEN----PNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHI 477
+ E P+++S++++I G+ GL EA+ + +M G+RP TY +S + +
Sbjct: 690 KTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAM 749
Query: 478 GLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRK-TGFDP 530
G+ E ++ M + P F +VD RAG EA F+ K FDP
Sbjct: 750 GMFAEIEDVIECMAKN-DCRPNELTFKMVVDGYCRAGKYSEAMDFVSKIKTFDP 802
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 104/465 (22%), Positives = 196/465 (42%), Gaps = 45/465 (9%)
Query: 123 DLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQI 182
D+ ++++++ +++ G +A+ LF M G P + + R+I
Sbjct: 209 DVRAYTTILHAYSRTGKYEKAIDLFERMKEMGP-SPTLVTYNVILDVFGKM--GRSWRKI 265
Query: 183 HGICAKF---GLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIES----PDLVSWNAIIAA 235
G+ + GL + F+ ++ A+ G L AK F +++S P V++NA++
Sbjct: 266 LGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQV 325
Query: 236 FADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKE 295
F +G EA+S+ ++M DS+T+ L+ A + + + K G
Sbjct: 326 FGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPN 385
Query: 296 VALYNSLLTMYTKCSNLHDALSVFEAISKNA---NLVSWNAILSACLQHKQAGETFRLFK 352
Y +++ Y K +AL +F ++ + N ++NA+LS + ++ E ++
Sbjct: 386 AITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLC 445
Query: 353 QMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCG 412
M + PN T +L C + N+V G D N LI Y +CG
Sbjct: 446 DMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCG 505
Query: 413 SVIHAQRVFDSTE----NPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYV 468
S + A +++ N V ++++L+ A G N+ M++ G +P E +Y
Sbjct: 506 SEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYS 565
Query: 469 GVL----SACSHIGL------VEEG-----WNLYNTMEEELGIPPAREHFSCMVDLLARA 513
+L +++G+ ++EG W L T+ +F C A A
Sbjct: 566 LMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTL--------LLANFKCR----ALA 613
Query: 514 GCLYEAETFIRKTGFDPDITTWKTLLSSCKTHGNVDIAERAAENI 558
G A T +K G+ PD+ + ++LS + D AE E+I
Sbjct: 614 GS-ERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESI 657
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/310 (21%), Positives = 127/310 (40%), Gaps = 21/310 (6%)
Query: 295 EVALYNSLLTMYTKCSNLHDALSVFEAISK---NANLVSWNAILSACLQHKQAGETFR-- 349
+V Y ++L Y++ A+ +FE + + + LV++N IL + G ++R
Sbjct: 209 DVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDV---FGKMGRSWRKI 265
Query: 350 --LFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDM 407
+ +M K + T + +L CA L + G N L+ +
Sbjct: 266 LGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQV 325
Query: 408 YAKCGSVIHAQRVFDSTEN----PNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPN 463
+ K G A V E + ++++ L+ Y +G EA + M GV PN
Sbjct: 326 FGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPN 385
Query: 464 EVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLL---ARAGCLYEAE 520
+TY V+ A G +E L+ +M+E G P ++ ++ LL +R+ + +
Sbjct: 386 AITYTTVIDAYGKAGKEDEALKLFYSMKEA-GCVPNTCTYNAVLSLLGKKSRSNEMIKML 444
Query: 521 TFIRKTGFDPDITTWKTLLSSCKTHGNVDIAERAAENILK--LDPSNSAALVLLSSIHAS 578
++ G P+ TW T+L+ C G R + +P L+S+ +
Sbjct: 445 CDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISA-YGR 503
Query: 579 AGNWEDVAKL 588
G+ D +K+
Sbjct: 504 CGSEVDASKM 513
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 90/378 (23%), Positives = 176/378 (46%), Gaps = 19/378 (5%)
Query: 13 QVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTFGSIIKACCIAG 72
Q+F + N V++ ++I G + + +EAV + +M+ G PD T+G+++ C G
Sbjct: 175 QMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRG 234
Query: 73 DIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIK----DLISWS 128
DI L L + K +V +I N+ V A ++FT + K ++++++
Sbjct: 235 DIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYN 294
Query: 129 SMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSAC---SSLLEPEYGRQIHGI 185
S+IR G +A L DM+ + + PN ++ A L+E E +++
Sbjct: 295 SLIRCLCNYGRWSDASRLLSDMIERKI-NPNVVTFSALIDAFVKEGKLVEAE---KLYDE 350
Query: 186 CAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIES----PDLVSWNAIIAAFADSGD 241
K + ++F+ SL + + L AK F + S P++V++N +I F +
Sbjct: 351 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKR 410
Query: 242 ANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNS 301
E + +FR+M GL+ +++T+ +L+ + +I +V G ++ Y+
Sbjct: 411 VEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSI 470
Query: 302 LLTMYTKCSNLHDALSVFEAISKN---ANLVSWNAILSACLQHKQAGETFRLFKQMLFSE 358
LL K L AL VFE + K+ ++ ++N ++ + + + + LF +
Sbjct: 471 LLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG 530
Query: 359 NKPNMITITNLL-GTCAE 375
KPN+I T ++ G C +
Sbjct: 531 VKPNVIIYTTMISGFCRK 548
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 114/552 (20%), Positives = 247/552 (44%), Gaps = 28/552 (5%)
Query: 7 SMKDARQVFDAM----HLRNVVSWTSMISGYSQNGQGNEAVVM--YIQMLRSGFFPDQLT 60
+ DA +F M L ++V + ++S ++ + + + + +Q LR + D +
Sbjct: 60 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISY--DLYS 117
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHA----SDVF 116
+ +I C + L + ++K G+ +V + L++ Y + +++ A +F
Sbjct: 118 YNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMF 177
Query: 117 TMISIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEP 176
M + ++++++I G EA+ L M+ +G QP+ F G+V + +
Sbjct: 178 VMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGC-QPDLFTYGTVVNGLCKRGDI 236
Query: 177 EYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIES----PDLVSWNAI 232
+ + K + +V ++ D + A F ++++ P++V++N++
Sbjct: 237 DLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSL 296
Query: 233 IAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGF 292
I + G ++A + M+ + P+ +TF +L+ A L + +++ ++K
Sbjct: 297 IRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 356
Query: 293 NKEVALYNSLLTMYTKCSNLHDALSVFE-AISKN--ANLVSWNAILSACLQHKQAGETFR 349
+ ++ Y+SL+ + L +A +FE ISK+ N+V++N ++ + K+ E
Sbjct: 357 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGME 416
Query: 350 LFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYA 409
LF++M N +T L+ + ++ ++ V G+ D+ + L+D
Sbjct: 417 LFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLC 476
Query: 410 KCGSVIHAQRVFD----STENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEV 465
K G + A VF+ S P++ +++ +I G +G + +LF + GV+PN +
Sbjct: 477 KYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVI 536
Query: 466 TYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFI-- 523
Y ++S GL EE L+ M+E+ G P ++ ++ R G + I
Sbjct: 537 IYTTMISGFCRKGLKEEADALFREMKED-GTLPNSGTYNTLIRARLRDGDKAASAELIKE 595
Query: 524 -RKTGFDPDITT 534
R GF D +T
Sbjct: 596 MRSCGFVGDAST 607
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 113/520 (21%), Positives = 218/520 (41%), Gaps = 86/520 (16%)
Query: 25 SWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTFGSIIKACCIAGDIYLGRQLHAHV 84
++ ++I+ + + GQ A+ + MLR+ P + T+ ++I AC +G+ ++ +
Sbjct: 180 TYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKM 239
Query: 85 IKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMIS----IKDLISWSSMIRGFTQLGYE 140
+G G LV N ++S Y + Q + A F ++ D +++ +I ++LG
Sbjct: 240 TDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQS 299
Query: 141 IEALYLFRDML-RQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFSGC 199
+AL LF M ++ +P+ S+ S E E R + GL N+ S
Sbjct: 300 SQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYN 359
Query: 200 SLCDMYA----------------KCGFLP-------------------SAKTAFYQI--- 221
+L YA + G +P AK F +
Sbjct: 360 ALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKE 419
Query: 222 -ESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQG 280
P++V++NA+I A+ +G EA+ IFRQM G+ P+ ++ +LL AC+
Sbjct: 420 RRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNV 479
Query: 281 MQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISK---NANLVSWNAILSA 337
+ S G N A YNS + Y + L A+++++++ K A+ V++ ++S
Sbjct: 480 DTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISG 539
Query: 338 CLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLD 397
+ + E K+M E S+ + +V+
Sbjct: 540 SCRMSKYPEAISYLKEM--------------------EDLSIPLTKEVY----------- 568
Query: 398 VSVSNGLIDMYAKCGSVIHAQRVFDSTE----NPNVISWSSLIVGYAMSGLGHEALNLFR 453
+ ++ Y+K G V A+ +F+ + P+VI+++S++ Y S +A LF
Sbjct: 569 ----SSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFL 624
Query: 454 KMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEE 493
+M G+ P+ + ++ A + G + L + M E+
Sbjct: 625 EMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREK 664
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 99/441 (22%), Positives = 199/441 (45%), Gaps = 34/441 (7%)
Query: 123 DLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQI 182
D ++ ++I + G A+ L DMLR + P+ ++ +AC S R+
Sbjct: 177 DAETYDALINAHGRAGQWRWAMNLMDDMLRAAI-APSRSTYNNLINACGS---SGNWREA 232
Query: 183 HGICAKF---GLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIES-----PDLVSWNAIIA 234
+C K G+ ++ + + Y K G S +++++ PD ++N II
Sbjct: 233 LEVCKKMTDNGVGPDLVTHNIVLSAY-KSGRQYSKALSYFELMKGAKVRPDTTTFNIIIY 291
Query: 235 AFADSGDANEAISIFRQMM--HIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGF 292
+ G +++A+ +F M PD +TF S++ + + + +V G
Sbjct: 292 CLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGL 351
Query: 293 NKEVALYNSLLTMYTKCSNLHDALSVFEAISKNA---NLVSWNAILSACLQHKQAGETFR 349
+ YN+L+ Y ALSV I +N ++VS+ +L++ + +Q G+
Sbjct: 352 KPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKE 411
Query: 350 LFKQMLFSENKPNMITITNLL---GTCAELA-SLEVGNQVHCFSVKSGLVLDVSVSNGLI 405
+F M KPN++T L+ G+ LA ++E+ Q+ +K +V SV L+
Sbjct: 412 VFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVV---SVCT-LL 467
Query: 406 DMYAKCGSVIHAQRVFDSTE----NPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVR 461
++ ++ V + + N N +++S I Y + +A+ L++ MR V+
Sbjct: 468 AACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVK 527
Query: 462 PNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAET 521
+ VT+ ++S + E + ME+ L IP +E +S ++ ++ G + EAE+
Sbjct: 528 ADSVTFTILISGSCRMSKYPEAISYLKEMED-LSIPLTKEVYSSVLCAYSKQGQVTEAES 586
Query: 522 F---IRKTGFDPDITTWKTLL 539
++ G +PD+ + ++L
Sbjct: 587 IFNQMKMAGCEPDVIAYTSML 607
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 75/346 (21%), Positives = 159/346 (45%), Gaps = 20/346 (5%)
Query: 229 WNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIV 288
+N +I A ++A +F +M PD+ T+ +L+ A M + ++
Sbjct: 146 YNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDML 205
Query: 289 KVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNA---NLVSWNAILSACLQHKQAG 345
+ + YN+L+ N +AL V + ++ N +LV+ N +LSA +Q
Sbjct: 206 RAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYS 265
Query: 346 ETFRLFKQMLFSENKPNMITITNLLGTCAELA----SLEVGNQVHCFSVKSGLVLDVSVS 401
+ F+ M ++ +P+ T ++ ++L +L++ N + ++ DV
Sbjct: 266 KALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMR--EKRAECRPDVVTF 323
Query: 402 NGLIDMYAKCGSVIHAQRVFDSTE----NPNVISWSSLIVGYAMSGLGHEALNLFRKMRN 457
++ +Y+ G + + + VF++ PN++S+++L+ YA+ G+ AL++ ++
Sbjct: 324 TSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQ 383
Query: 458 LGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLY 517
G+ P+ V+Y +L++ + ++ M +E P ++ ++D G L
Sbjct: 384 NGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNV-VTYNALIDAYGSNGFLA 442
Query: 518 EAETFIR---KTGFDPDITTWKTLLSSC---KTHGNVDIAERAAEN 557
EA R + G P++ + TLL++C K NVD AA++
Sbjct: 443 EAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQS 488
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 73/329 (22%), Positives = 141/329 (42%), Gaps = 59/329 (17%)
Query: 2 YGKCGSMKDARQVFDAMHLR----NVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPD 57
YG+ A++VF M NVV++ ++I Y NG EAV ++ QM + G P+
Sbjct: 400 YGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPN 459
Query: 58 QLTFGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFT 117
++ +++ AC + + + G + A N I Y N ++ A ++
Sbjct: 460 VVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQ 519
Query: 118 MISIK----DLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSL 173
+ K D ++++ +I G ++ EA+ ++M L
Sbjct: 520 SMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEM--------------------EDL 559
Query: 174 LEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIE----SPDLVSW 229
P L + V+S LC Y+K G + A++ F Q++ PD++++
Sbjct: 560 SIP--------------LTKEVYSSV-LC-AYSKQGQVTEAESIFNQMKMAGCEPDVIAY 603
Query: 230 NAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPM-ALNQGMQIHSYIV 288
+++ A+ S +A +F +M G+ PDSI AC++ M A N+G Q + V
Sbjct: 604 TSMLHAYNASEKWGKACELFLEMEANGIEPDSI-------ACSALMRAFNKGGQPSNVFV 656
Query: 289 KVGF--NKEVALYNSL-LTMYTKCSNLHD 314
+ KE+ ++ +++ C+ L +
Sbjct: 657 LMDLMREKEIPFTGAVFFEIFSACNTLQE 685
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 112 bits (280), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 105/468 (22%), Positives = 207/468 (44%), Gaps = 45/468 (9%)
Query: 22 NVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTFGSIIKACCIAGDIYLGRQLH 81
+ V+++++I+G G+ +EA+ + +M+ G P +T +++ C+ G + L
Sbjct: 141 DTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLI 200
Query: 82 AHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIK----DLISWSSMIRGFTQL 137
++++GF + V ++ + GQ A A ++ + + D + +S +I G +
Sbjct: 201 DRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKD 260
Query: 138 GYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFS 197
G A LF +M +G ++ + + Y I G C ++
Sbjct: 261 GSLDNAFNLFNEMEIKG-FKADIII---------------YTTLIRGFC---------YA 295
Query: 198 GCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGL 257
G D AK + + +PD+V+++A+I F G EA + ++M+ G+
Sbjct: 296 G--RWDDGAKL-----LRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGI 348
Query: 258 IPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALS 317
PD++T+ SL+ L++ + +V G + +N L+ Y K + + D L
Sbjct: 349 SPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLE 408
Query: 318 VFEAISKN---ANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCA 374
+F +S A+ V++N ++ + + LF++M+ +P++++ LL
Sbjct: 409 LFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLC 468
Query: 375 ELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTE----NPNVI 430
+ E ++ KS + LD+ + N +I V A +F S P+V
Sbjct: 469 DNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVK 528
Query: 431 SWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIG 478
+++ +I G G EA LFRKM G PN TY ++ A H+G
Sbjct: 529 TYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRA--HLG 574
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/389 (20%), Positives = 177/389 (45%), Gaps = 16/389 (4%)
Query: 6 GSMKDARQVFDAM----HLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTF 61
G + +A ++ D M H +++ ++++G NG+ ++AV++ +M+ +GF P+++T+
Sbjct: 156 GRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTY 215
Query: 62 GSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISI 121
G ++K C +G L +L + + V + +I G + +A ++F + I
Sbjct: 216 GPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEI 275
Query: 122 K----DLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPE 177
K D+I ++++IRGF G + L RDM+++ + P+ ++ +
Sbjct: 276 KGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKI-TPDVVAFSALIDCFVKEGKLR 334
Query: 178 YGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIES----PDLVSWNAII 233
++H + G+ + + SL D + K L A + S P++ ++N +I
Sbjct: 335 EAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILI 394
Query: 234 AAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFN 293
+ + ++ + +FR+M G++ D++T+ +L+ L ++ +V
Sbjct: 395 NGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVR 454
Query: 294 KEVALYNSLLTMYTKCSNLHDALSVFEAISKNA---NLVSWNAILSACLQHKQAGETFRL 350
++ Y LL AL +FE I K+ ++ +N I+ + + + L
Sbjct: 455 PDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDL 514
Query: 351 FKQMLFSENKPNMITITNLLGTCAELASL 379
F + KP++ T ++G + SL
Sbjct: 515 FCSLPLKGVKPDVKTYNIMIGGLCKKGSL 543
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 95/436 (21%), Positives = 178/436 (40%), Gaps = 72/436 (16%)
Query: 123 DLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQI 182
D +++S++I G G EAL L M+ G ++P L ++ +
Sbjct: 141 DTVTFSTLINGLCLEGRVSEALELVDRMVEMG-HKPTLITLNAL---------------V 184
Query: 183 HGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDA 242
+G+C L V L D + GF P+ V++ ++ SG
Sbjct: 185 NGLC----LNGKVSDAVLLIDRMVETGFQPNE------------VTYGPVLKVMCKSGQT 228
Query: 243 NEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSL 302
A+ + R+M + D++ + ++ +L+ + + + GF ++ +Y +L
Sbjct: 229 ALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTL 288
Query: 303 LTMYTKCSNLHDALSVFEAISKNA---NLVSWNAILSACLQHKQAGETFRLFKQMLFSEN 359
+ + D + + K ++V+++A++ ++ + E L K+M+
Sbjct: 289 IRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGI 348
Query: 360 KPNMITITNLL-GTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQ 418
P+ +T T+L+ G C E NQ+ K+ +LD+ VS G CG
Sbjct: 349 SPDTVTYTSLIDGFCKE-------NQLD----KANHMLDLMVSKG-------CG------ 384
Query: 419 RVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIG 478
PN+ +++ LI GY + L + L LFRKM GV + VTY ++ +G
Sbjct: 385 --------PNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELG 436
Query: 479 LVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEA-ETF--IRKTGFDPDITTW 535
+E L+ M + P + ++D L G +A E F I K+ + DI +
Sbjct: 437 KLEVAKELFQEMVSR-RVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIY 495
Query: 536 KTLLSSCKTHGNVDIA 551
++ VD A
Sbjct: 496 NIIIHGMCNASKVDDA 511
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 126/287 (43%), Gaps = 48/287 (16%)
Query: 22 NVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTFGSIIKACCIAGDIYLGRQLH 81
+VV+++++I + + G+ EA ++ +M++ G PD +T+ S+I C + +
Sbjct: 316 DVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHML 375
Query: 82 AHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIK----DLISWSSMIRGFTQL 137
++ G G ++ N LI+ Y + ++F +S++ D ++++++I+GF +L
Sbjct: 376 DLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCEL 435
Query: 138 GYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPE-------------------- 177
G A LF++M+ + V +P+ + EPE
Sbjct: 436 GKLEVAKELFQEMVSRRV-RPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGI 494
Query: 178 YGRQIHGIC--AKFGLVRNVFSGCSL--------CDMY-------AKCGFLPSAKTAFYQ 220
Y IHG+C +K ++F CSL Y K G L A F +
Sbjct: 495 YNIIIHGMCNASKVDDAWDLF--CSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRK 552
Query: 221 IE----SPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSIT 263
+E SP+ ++N +I A GDA ++ + ++ G D+ T
Sbjct: 553 MEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDAST 599
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 107/257 (41%), Gaps = 11/257 (4%)
Query: 314 DALSVFEAISKN---ANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLL 370
DA+ +F+ ++++ L+ ++ + S + KQ L KQM N+ T++ ++
Sbjct: 55 DAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMI 114
Query: 371 GTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHA----QRVFDSTEN 426
C L + +K G D + LI+ G V A R+ +
Sbjct: 115 NCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHK 174
Query: 427 PNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNL 486
P +I+ ++L+ G ++G +A+ L +M G +PNEVTY VL G L
Sbjct: 175 PTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMEL 234
Query: 487 YNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRK---TGFDPDITTWKTLLSSCK 543
MEE I +S ++D L + G L A + GF DI + TL+
Sbjct: 235 LRKMEER-KIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFC 293
Query: 544 THGNVDIAERAAENILK 560
G D + +++K
Sbjct: 294 YAGRWDDGAKLLRDMIK 310
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/333 (18%), Positives = 144/333 (43%), Gaps = 12/333 (3%)
Query: 224 PDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQI 283
P L+ ++ + + A + + + + +QM G+ + T ++ C L+
Sbjct: 70 PRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSA 129
Query: 284 HSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISK---NANLVSWNAILSACLQ 340
I+K+G+ + +++L+ + +AL + + + + L++ NA+++
Sbjct: 130 MGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCL 189
Query: 341 HKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSV 400
+ + + L +M+ + +PN +T +L + + ++ + + LD
Sbjct: 190 NGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVK 249
Query: 401 SNGLIDMYAKCGSVIHAQRVFDSTE----NPNVISWSSLIVGYAMSGLGHEALNLFRKMR 456
+ +ID K GS+ +A +F+ E ++I +++LI G+ +G + L R M
Sbjct: 250 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMI 309
Query: 457 NLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCL 516
+ P+ V + ++ G + E L+ M + GI P ++ ++D + L
Sbjct: 310 KRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQR-GISPDTVTYTSLIDGFCKENQL 368
Query: 517 YEAE---TFIRKTGFDPDITTWKTLLSS-CKTH 545
+A + G P+I T+ L++ CK +
Sbjct: 369 DKANHMLDLMVSKGCGPNIRTFNILINGYCKAN 401
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 112 bits (280), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 108/510 (21%), Positives = 220/510 (43%), Gaps = 38/510 (7%)
Query: 20 LRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTFGSIIKACCIAGDIYLGRQ 79
L NVV++++++ G Q + M+ G +P F S++ A C +GD +
Sbjct: 334 LPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYK 393
Query: 80 LHAHVIKSGFGGHLVAQNGLI--------SMYTNFGQVAHA--SDVFTMISIKDLISWSS 129
L ++K G V N LI S+ + +A S++ + + I+ SS
Sbjct: 394 LLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSS 453
Query: 130 MIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKF 189
R G +A + R+M+ QG + P+ V + + + E + +
Sbjct: 454 FTRCLCSAGKYEKAFSVIREMIGQG-FIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRG 512
Query: 190 GLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIE----SPDLVSWNAIIAAFADSGDANEA 245
GLV +V++ + D + K G + A+ F ++ +P++V++ A+I A+ + + A
Sbjct: 513 GLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYA 572
Query: 246 ISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHS-------------YIVKVGF 292
+F M+ G +P+ +T+ +L+ + + QI Y +
Sbjct: 573 NELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDD 632
Query: 293 NKE---VALYNSLLTMYTKCSNLHDALSVFEAISKNA---NLVSWNAILSACLQHKQAGE 346
N E V Y +LL + K + +A + +A+S N + ++A++ + + E
Sbjct: 633 NSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDE 692
Query: 347 TFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLID 406
+ +M + T ++L+ ++ ++ ++V +++ +V + +ID
Sbjct: 693 AQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMID 752
Query: 407 MYAKCGSVIHAQRVFDSTE----NPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRP 462
K G A ++ E PNV++++++I G+ M G L L +M + GV P
Sbjct: 753 GLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAP 812
Query: 463 NEVTYVGVLSACSHIGLVEEGWNLYNTMEE 492
N VTY ++ C G ++ NL M++
Sbjct: 813 NYVTYRVLIDHCCKNGALDVAHNLLEEMKQ 842
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 75/374 (20%), Positives = 145/374 (38%), Gaps = 72/374 (19%)
Query: 224 PDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQI 283
PD V + +I+ ++ EA+ +M +P+ +T+ +LLC C + L + ++
Sbjct: 300 PDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRV 359
Query: 284 HSYIVKVGFNKEVALYNSLLTMY----------------TKCSNLH-------------- 313
+ ++ G ++NSL+ Y KC ++
Sbjct: 360 LNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICG 419
Query: 314 -------DALSVFE----------AISKNANLVSWNAILSACLQHKQAGETFRLFKQMLF 356
D L + E + N+ S+ L + ++++A F + ++M+
Sbjct: 420 DKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKA---FSVIREMIG 476
Query: 357 SENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIH 416
P+ T + +L + +E+ + + GLV DV ++D + K G +
Sbjct: 477 QGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQ 536
Query: 417 AQRVFDSTE----NPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLS 472
A++ F+ PNV+++++LI Y + A LF M + G PN VTY ++
Sbjct: 537 ARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALID 596
Query: 473 ACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDI 532
G VE+ ++ M +P +F D R P++
Sbjct: 597 GHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSER-----------------PNV 639
Query: 533 TTWKTLLSS-CKTH 545
T+ LL CK+H
Sbjct: 640 VTYGALLDGFCKSH 653
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 75/378 (19%), Positives = 149/378 (39%), Gaps = 63/378 (16%)
Query: 12 RQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTFGSIIKACCIA 71
+Q D NVV++ +++ G+ ++ + EA + M G P+Q+ + ++I C
Sbjct: 628 KQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKV 687
Query: 72 GDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMI----SIKDLISW 127
G + +++ + + GF L + LI Y + AS V + + +++ +
Sbjct: 688 GKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIY 747
Query: 128 SSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICA 187
+ MI G ++G EA L + M +G QPN Y I G
Sbjct: 748 TEMIDGLCKVGKTDEAYKLMQMMEEKGC-QPNVVT---------------YTAMIDG--- 788
Query: 188 KFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAIS 247
FG++ + + L + G +P+ V++ +I +G + A +
Sbjct: 789 -FGMIGKIETCLELLERMGSKGV------------APNYVTYRVLIDHCCKNGALDVAHN 835
Query: 248 IFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEV---------AL 298
+ +M + + ++ +G +I +G E+ ++
Sbjct: 836 LLEEMKQTHWPTHTAGYRKVI----------EGFN-KEFIESLGLLDEIGQDDTAPFLSV 884
Query: 299 YNSLLTMYTKCSNLHDALSVFEAISK-NANLVSWNA-----ILSACLQHKQAGETFRLFK 352
Y L+ K L AL + E ++ +A LV +++ I S CL +K F+LF
Sbjct: 885 YRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANK-VETAFQLFS 943
Query: 353 QMLFSENKPNMITITNLL 370
+M P M + +L+
Sbjct: 944 EMTKKGVIPEMQSFCSLI 961
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 112 bits (280), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 112/430 (26%), Positives = 194/430 (45%), Gaps = 60/430 (13%)
Query: 215 KTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITF---LSLLCAC 271
+ FY E P + S+NAI++ DSG ++A ++ +M G+ PD +F + C
Sbjct: 101 RMDFYDCE-PTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKT 159
Query: 272 TSPMA----LN----QG--MQIHSYIVKVG--------------FNKEVA--------LY 299
+ P A LN QG M + +Y VG F K +A +
Sbjct: 160 SRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTF 219
Query: 300 NSLLTMYTKCSNLHDALSVFEAISKNA---NLVSWNAILSACLQHKQAGETFRLFKQMLF 356
N LL + K ++ + + + + K NL ++N + Q + R+ ++
Sbjct: 220 NKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIE 279
Query: 357 SENKPNMITITNLL-GTCA----ELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKC 411
KP++IT NL+ G C + A + +G V+ GL D N LI Y K
Sbjct: 280 QGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVN-----EGLEPDSYTYNTLIAGYCKG 334
Query: 412 GSVIHAQRVF-DSTEN---PNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTY 467
G V A+R+ D+ N P+ ++ SLI G G + AL LF + G++PN + Y
Sbjct: 335 GMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILY 394
Query: 468 VGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIR--- 524
++ S+ G++ E L N M E+ G+ P + F+ +V+ L + GC+ +A+ ++
Sbjct: 395 NTLIKGLSNQGMILEAAQLANEMSEK-GLIPEVQTFNILVNGLCKMGCVSDADGLVKVMI 453
Query: 525 KTGFDPDITTWKTLLSSCKTHGNVDIAERAAENILK--LDPSNSAALVLLSSIHASAGNW 582
G+ PDI T+ L+ T ++ A + +L +DP LL+ + ++ +
Sbjct: 454 SKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTS-KF 512
Query: 583 EDVAKLRKVL 592
EDV + K +
Sbjct: 513 EDVMETYKTM 522
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 111/543 (20%), Positives = 209/543 (38%), Gaps = 94/543 (17%)
Query: 4 KCGSMKDARQVFDAMHLR----NVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQL 59
K G +K+ ++ D + R N+ ++ I G Q G+ + AV M ++ G PD +
Sbjct: 228 KKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVI 287
Query: 60 TFGSIIKACCI-----AGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHAS- 113
T+ ++I C ++YLG+ ++ G N LI+ Y G V A
Sbjct: 288 TYNNLIYGLCKNSKFQEAEVYLGK-----MVNEGLEPDSYTYNTLIAGYCKGGMVQLAER 342
Query: 114 ---DVFTMISIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSAC 170
D + D ++ S+I G G AL LF + L +G+ +PN + ++
Sbjct: 343 IVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGI-KPNVILYNTLIKGL 401
Query: 171 SSLLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWN 230
S+ G+ + L + ++ G +P +T +N
Sbjct: 402 SN----------QGM---------ILEAAQLANEMSEKGLIPEVQT------------FN 430
Query: 231 AIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKV 290
++ G ++A + + M+ G PD TF L+ ++ + + ++I ++
Sbjct: 431 ILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDN 490
Query: 291 GFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNA---NLVSWNAILSACLQHKQAGET 347
G + +V YNSLL K S D + ++ + + NL ++N +L + ++++ E
Sbjct: 491 GVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEA 550
Query: 348 FRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDM 407
L ++M P+ +T GT LID
Sbjct: 551 LGLLEEMKNKSVNPDAVT----FGT-------------------------------LIDG 575
Query: 408 YAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHE-----ALNLFRKMRNLGVRP 462
+ K G + A +F E +S S+ + + A LF++M + + P
Sbjct: 576 FCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGP 635
Query: 463 NEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETF 522
+ TY ++ G V G+ M E G P+ +++ L +YEA
Sbjct: 636 DGYTYRLMVDGFCKTGNVNLGYKFLLEMMEN-GFIPSLTTLGRVINCLCVEDRVYEAAGI 694
Query: 523 IRK 525
I +
Sbjct: 695 IHR 697
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 107/534 (20%), Positives = 219/534 (41%), Gaps = 48/534 (8%)
Query: 22 NVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTFGSIIKACCIAGDIYLGRQLH 81
NVV++ +++ G+ + E ++ +ML SG TF +++ C GD+ +L
Sbjct: 180 NVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLL 239
Query: 82 AHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMI----SIKDLISWSSMIRGFTQL 137
VIK G +L N I G++ A + + D+I+++++I G +
Sbjct: 240 DKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKN 299
Query: 138 GYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFS 197
EA M+ +G+ +P+ + ++ + + +I G G V + F+
Sbjct: 300 SKFQEAEVYLGKMVNEGL-EPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFT 358
Query: 198 GCSLCDMYAKCGFLPSAKTAFYQIE----SPDLVSWNAIIAAFADSGDANEAISIFRQMM 253
SL D G A F + P+++ +N +I ++ G EA + +M
Sbjct: 359 YRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMS 418
Query: 254 HIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLH 313
GLIP+ TF L+ ++ + ++ G+ ++ +N L+ Y+ +
Sbjct: 419 EKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKME 478
Query: 314 DALSVFEAISKNA---NLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLL 370
+AL + + + N ++ ++N++L+ + + + +K M+ PN+ T LL
Sbjct: 479 NALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILL 538
Query: 371 GTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVI 430
+ L+ + GL+ + + + + NP+ +
Sbjct: 539 ESLCRYRKLD-------------------EALGLL------------EEMKNKSVNPDAV 567
Query: 431 SWSSLIVGYAMSGLGHEALNLFRKMRN-LGVRPNEVTYVGVLSACSHIGLVEEGWNLYNT 489
++ +LI G+ +G A LFRKM V + TY ++ A + V L+
Sbjct: 568 TFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQE 627
Query: 490 MEEELGIPPAREHFSCMVDLLARAGCLYEAETFI---RKTGFDPDITTWKTLLS 540
M + + P + MVD + G + F+ + GF P +TT +++
Sbjct: 628 MVDRC-LGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVIN 680
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 112 bits (279), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 107/505 (21%), Positives = 213/505 (42%), Gaps = 87/505 (17%)
Query: 2 YGKCGSMKDARQVFDAMH----LRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPD 57
+ + G + A ++ + + + +V+++ MISGY + G+ N A+ + +M S PD
Sbjct: 147 FCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVS---PD 203
Query: 58 QLTFGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFT 117
+T+ +I+++ C +G + ++ +++ ++ LI V HA +
Sbjct: 204 VVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLD 263
Query: 118 MISIK----DLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVF-SACSS 172
+ + D+++++ ++ G + G EA+ DM G QPN + S CS+
Sbjct: 264 EMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGC-QPNVITHNIILRSMCST 322
Query: 173 LLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAI 232
GR + K L DM K GF SP +V++N +
Sbjct: 323 ------GRWMDA--EKL-----------LADMLRK-GF------------SPSVVTFNIL 350
Query: 233 IAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGF 292
I G AI I +M G P+S+++ LL +++ ++ +V G
Sbjct: 351 INFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGC 410
Query: 293 NKEVALYNSLLTMYTKCSNLHDALSVFEAISKNAN---LVSWNAILSACLQHKQAGETFR 349
++ YN++LT K + DA+ + +S L+++N ++ + + G+ +
Sbjct: 411 YPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIK 470
Query: 350 LFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYA 409
L +M + KP+ IT ++L+G GL +
Sbjct: 471 LLDEMRAKDLKPDTITYSSLVG-------------------------------GL----S 495
Query: 410 KCGSVIHAQRVFDSTEN----PNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEV 465
+ G V A + F E PN ++++S+++G S A++ M N G +PNE
Sbjct: 496 REGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNET 555
Query: 466 TYVGVLSACSHIGLVEEGWNLYNTM 490
+Y ++ ++ G+ +E L N +
Sbjct: 556 SYTILIEGLAYEGMAKEALELLNEL 580
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 107/477 (22%), Positives = 195/477 (40%), Gaps = 41/477 (8%)
Query: 82 AHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIKDLISWSSMIRGFTQLGYEI 141
+ V SG G L S Y+N H S V + +++D+ S ++ +R + G
Sbjct: 61 SKVESSGLNGRAQKFETLSSGYSNSNGNGHYSSVNSSFALEDVES-NNHLRQMVRTGELE 119
Query: 142 EALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFSGCSL 201
E +M+ G P+ ++ L + +I I G V +V + +
Sbjct: 120 EGFKFLENMVYHGNV-PDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVM 178
Query: 202 CDMYAKCGFLPSAKTAFYQIE-SPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPD 260
Y K G + +A + ++ SPD+V++N I+ + DSG +A+ + +M+ PD
Sbjct: 179 ISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPD 238
Query: 261 SITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFE 320
IT+ L+ A + M++ + G +V YN L+ K L +A+
Sbjct: 239 VITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLN 298
Query: 321 AISKNA---NLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELA 377
+ + N+++ N IL + + + +L ML P+++T L+
Sbjct: 299 DMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILIN------ 352
Query: 378 SLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIV 437
F + GL+ ID+ K H + PN +S++ L+
Sbjct: 353 ----------FLCRKGLL------GRAIDILEKMPQ--HGCQ-------PNSLSYNPLLH 387
Query: 438 GYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIP 497
G+ A+ +M + G P+ VTY +L+A G VE+ + N + + G
Sbjct: 388 GFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSK-GCS 446
Query: 498 PAREHFSCMVDLLARAGCLYEAETFI---RKTGFDPDITTWKTLLSSCKTHGNVDIA 551
P ++ ++D LA+AG +A + R PD T+ +L+ G VD A
Sbjct: 447 PVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEA 503
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 112 bits (279), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 113/520 (21%), Positives = 218/520 (41%), Gaps = 86/520 (16%)
Query: 25 SWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTFGSIIKACCIAGDIYLGRQLHAHV 84
++ ++I+ + + GQ A+ + MLR+ P + T+ ++I AC +G+ ++ +
Sbjct: 48 TYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKM 107
Query: 85 IKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMIS----IKDLISWSSMIRGFTQLGYE 140
+G G LV N ++S Y + Q + A F ++ D +++ +I ++LG
Sbjct: 108 TDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQS 167
Query: 141 IEALYLFRDML-RQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFSGC 199
+AL LF M ++ +P+ S+ S E E R + GL N+ S
Sbjct: 168 SQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYN 227
Query: 200 SLCDMYA----------------KCGFLP-------------------SAKTAFYQI--- 221
+L YA + G +P AK F +
Sbjct: 228 ALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKE 287
Query: 222 -ESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQG 280
P++V++NA+I A+ +G EA+ IFRQM G+ P+ ++ +LL AC+
Sbjct: 288 RRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNV 347
Query: 281 MQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISK---NANLVSWNAILSA 337
+ S G N A YNS + Y + L A+++++++ K A+ V++ ++S
Sbjct: 348 DTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISG 407
Query: 338 CLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLD 397
+ + E K+M E S+ + +V+
Sbjct: 408 SCRMSKYPEAISYLKEM--------------------EDLSIPLTKEVY----------- 436
Query: 398 VSVSNGLIDMYAKCGSVIHAQRVFDSTE----NPNVISWSSLIVGYAMSGLGHEALNLFR 453
+ ++ Y+K G V A+ +F+ + P+VI+++S++ Y S +A LF
Sbjct: 437 ----SSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFL 492
Query: 454 KMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEE 493
+M G+ P+ + ++ A + G + L + M E+
Sbjct: 493 EMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREK 532
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 99/441 (22%), Positives = 199/441 (45%), Gaps = 34/441 (7%)
Query: 123 DLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQI 182
D ++ ++I + G A+ L DMLR + P+ ++ +AC S R+
Sbjct: 45 DAETYDALINAHGRAGQWRWAMNLMDDMLRAAI-APSRSTYNNLINACGS---SGNWREA 100
Query: 183 HGICAKF---GLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIES-----PDLVSWNAIIA 234
+C K G+ ++ + + Y K G S +++++ PD ++N II
Sbjct: 101 LEVCKKMTDNGVGPDLVTHNIVLSAY-KSGRQYSKALSYFELMKGAKVRPDTTTFNIIIY 159
Query: 235 AFADSGDANEAISIFRQMM--HIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGF 292
+ G +++A+ +F M PD +TF S++ + + + +V G
Sbjct: 160 CLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGL 219
Query: 293 NKEVALYNSLLTMYTKCSNLHDALSVFEAISKNA---NLVSWNAILSACLQHKQAGETFR 349
+ YN+L+ Y ALSV I +N ++VS+ +L++ + +Q G+
Sbjct: 220 KPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKE 279
Query: 350 LFKQMLFSENKPNMITITNLL---GTCAELA-SLEVGNQVHCFSVKSGLVLDVSVSNGLI 405
+F M KPN++T L+ G+ LA ++E+ Q+ +K +V SV L+
Sbjct: 280 VFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVV---SVCT-LL 335
Query: 406 DMYAKCGSVIHAQRVFDSTE----NPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVR 461
++ ++ V + + N N +++S I Y + +A+ L++ MR V+
Sbjct: 336 AACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVK 395
Query: 462 PNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAET 521
+ VT+ ++S + E + ME+ L IP +E +S ++ ++ G + EAE+
Sbjct: 396 ADSVTFTILISGSCRMSKYPEAISYLKEMED-LSIPLTKEVYSSVLCAYSKQGQVTEAES 454
Query: 522 F---IRKTGFDPDITTWKTLL 539
++ G +PD+ + ++L
Sbjct: 455 IFNQMKMAGCEPDVIAYTSML 475
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 83/382 (21%), Positives = 175/382 (45%), Gaps = 30/382 (7%)
Query: 229 WNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIV 288
+N +I A ++A +F +M PD+ T+ +L+ A M + ++
Sbjct: 14 YNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDML 73
Query: 289 KVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNA---NLVSWNAILSACLQHKQAG 345
+ + YN+L+ N +AL V + ++ N +LV+ N +LSA +Q
Sbjct: 74 RAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYS 133
Query: 346 ETFRLFKQMLFSENKPNMITITNLLGTCAELA----SLEVGNQVHCFSVKSGLVLDVSVS 401
+ F+ M ++ +P+ T ++ ++L +L++ N + ++ DV
Sbjct: 134 KALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMR--EKRAECRPDVVTF 191
Query: 402 NGLIDMYAKCGSVIHAQRVFDSTE----NPNVISWSSLIVGYAMSGLGHEALNLFRKMRN 457
++ +Y+ G + + + VF++ PN++S+++L+ YA+ G+ AL++ ++
Sbjct: 192 TSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQ 251
Query: 458 LGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLY 517
G+ P+ V+Y +L++ + ++ M +E P ++ ++D G L
Sbjct: 252 NGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVT-YNALIDAYGSNGFLA 310
Query: 518 EAETFIR---KTGFDPDITTWKTLLSSC---KTHGNVDIAERAAENILKLDPSNSAALVL 571
EA R + G P++ + TLL++C K NVD AA+ S + L
Sbjct: 311 EAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQ---------SRGINL 361
Query: 572 LSSIHASA-GNWEDVAKLRKVL 592
++ + SA G++ + A+L K +
Sbjct: 362 NTAAYNSAIGSYINAAELEKAI 383
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 73/329 (22%), Positives = 141/329 (42%), Gaps = 59/329 (17%)
Query: 2 YGKCGSMKDARQVFDAMHLR----NVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPD 57
YG+ A++VF M NVV++ ++I Y NG EAV ++ QM + G P+
Sbjct: 268 YGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPN 327
Query: 58 QLTFGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFT 117
++ +++ AC + + + G + A N I Y N ++ A ++
Sbjct: 328 VVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQ 387
Query: 118 MISIK----DLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSL 173
+ K D ++++ +I G ++ EA+ ++M L
Sbjct: 388 SMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEM--------------------EDL 427
Query: 174 LEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIE----SPDLVSW 229
P L + V+S LC Y+K G + A++ F Q++ PD++++
Sbjct: 428 SIP--------------LTKEVYSSV-LC-AYSKQGQVTEAESIFNQMKMAGCEPDVIAY 471
Query: 230 NAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPM-ALNQGMQIHSYIV 288
+++ A+ S +A +F +M G+ PDSI AC++ M A N+G Q + V
Sbjct: 472 TSMLHAYNASEKWGKACELFLEMEANGIEPDSI-------ACSALMRAFNKGGQPSNVFV 524
Query: 289 KVGF--NKEVALYNSL-LTMYTKCSNLHD 314
+ KE+ ++ +++ C+ L +
Sbjct: 525 LMDLMREKEIPFTGAVFFEIFSACNTLQE 553
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 151/339 (44%), Gaps = 13/339 (3%)
Query: 190 GLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIES----PDLVSWNAIIAAFADSG-DANE 244
G V++ +L Y + G A + F ++ P+LV++NA+I A G + +
Sbjct: 263 GYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQ 322
Query: 245 AISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLT 304
F +M G+ PD ITF SLL C+ + + ++V YN+LL
Sbjct: 323 VAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLD 382
Query: 305 MYTKCSNLHDALSVFEAISKN---ANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKP 361
K + A + + N+VS++ ++ + + E LF +M +
Sbjct: 383 AICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIAL 442
Query: 362 NMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVF 421
+ ++ LL ++ E + G+ DV N L+ Y K G ++VF
Sbjct: 443 DRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVF 502
Query: 422 DSTEN----PNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHI 477
+ PN++++S+LI GY+ GL EA+ +FR+ ++ G+R + V Y ++ A
Sbjct: 503 TEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKN 562
Query: 478 GLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCL 516
GLV +L + M +E GI P ++ ++D R+ +
Sbjct: 563 GLVGSAVSLIDEMTKE-GISPNVVTYNSIIDAFGRSATM 600
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 102/452 (22%), Positives = 195/452 (43%), Gaps = 46/452 (10%)
Query: 72 GDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMIS----IKDLISW 127
G + + +++ G+G + A + LIS Y G A VF + +L+++
Sbjct: 247 GKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTY 306
Query: 128 SSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICA 187
+++I + G E + + F D +++ QP+ S+ + CS E R +
Sbjct: 307 NAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMT 366
Query: 188 KFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIE----SPDLVSWNAIIAAFADSGDAN 243
+ ++VFS +L D K G + A Q+ P++VS++ +I FA +G +
Sbjct: 367 NRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFD 426
Query: 244 EAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLL 303
EA+++F +M ++G+ D +++ +LL T + + I + VG K+V YN+LL
Sbjct: 427 EALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALL 486
Query: 304 TMYTKCSNLHDALSVFEAISKN---ANLVSWNAILSACLQ---HKQAGETFRLFKQMLFS 357
Y K + VF + + NL++++ ++ + +K+A E FR FK
Sbjct: 487 GGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGL- 545
Query: 358 ENKPNMITITNLLGTCAELASLEVGNQVHCFS--VKSGLVLDVSVSNGLIDMYAKCGSVI 415
+ +++ + L+ + VG+ V K G+ +V N +ID + + ++
Sbjct: 546 --RADVVLYSALIDALCKNGL--VGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMD 601
Query: 416 H---------------AQRVFDSTENPNVISWSSLIVGYAMSGLGHEA----------LN 450
A TE VI + + + + L
Sbjct: 602 RSADYSNGGSLPFSSSALSALTETEGNRVIQLFGQLTTESNNRTTKDCEEGMQELSCILE 661
Query: 451 LFRKMRNLGVRPNEVTYVGVLSACSHIGLVEE 482
+FRKM L ++PN VT+ +L+ACS E+
Sbjct: 662 VFRKMHQLEIKPNVVTFSAILNACSRCNSFED 693
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 129/263 (49%), Gaps = 18/263 (6%)
Query: 291 GFNKEVALYNSLLTMYTKCSNLHDALSVFEAISK---NANLVSWNAILSAC----LQHKQ 343
G+ V +++L++ Y + +A+SVF ++ + NLV++NA++ AC ++ KQ
Sbjct: 263 GYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQ 322
Query: 344 AGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNG 403
+ F +M + +P+ IT +LL C+ E + + DV N
Sbjct: 323 VA---KFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNT 379
Query: 404 LIDMYAKCGSVIHAQRVFDSTE----NPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLG 459
L+D K G + A + PNV+S+S++I G+A +G EALNLF +MR LG
Sbjct: 380 LLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLG 439
Query: 460 VRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEA 519
+ + V+Y +LS + +G EE ++ M +GI ++ ++ + G E
Sbjct: 440 IALDRVSYNTLLSIYTKVGRSEEALDILREM-ASVGIKKDVVTYNALLGGYGKQGKYDEV 498
Query: 520 E---TFIRKTGFDPDITTWKTLL 539
+ T +++ P++ T+ TL+
Sbjct: 499 KKVFTEMKREHVLPNLLTYSTLI 521
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 95/431 (22%), Positives = 179/431 (41%), Gaps = 73/431 (16%)
Query: 2 YGKCGSMKDARQVFDAMH---LR-NVVSWTSMISGYSQNGQGNEAVVMYI-QMLRSGFFP 56
YG+ G ++A VF++M LR N+V++ ++I + G + V + +M R+G P
Sbjct: 278 YGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQP 337
Query: 57 DQLTFGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVF 116
D++TF S++ C G R L + + + N L+ GQ+ A ++
Sbjct: 338 DRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEIL 397
Query: 117 TMISIK----DLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSS 172
+ +K +++S+S++I GF + G EAL LF +M G+ + ++ S +
Sbjct: 398 AQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIAL-DRVSYNTLLSIYTK 456
Query: 173 LLEPEYGRQI----------------------HGICAKFGLVRNVFSG------------ 198
+ E I +G K+ V+ VF+
Sbjct: 457 VGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLT 516
Query: 199 -CSLCDMYAKCGFLPSAKTAFYQIESP----DLVSWNAIIAAFADSGDANEAISIFRQMM 253
+L D Y+K G A F + +S D+V ++A+I A +G A+S+ +M
Sbjct: 517 YSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMT 576
Query: 254 HIGLIPDSITFLSLLCACTSPMALNQGMQIH------------SYIVKVGFNKEVALYNS 301
G+ P+ +T+ S++ A +++ S + + N+ + L+
Sbjct: 577 KEGISPNVVTYNSIIDAFGRSATMDRSADYSNGGSLPFSSSALSALTETEGNRVIQLFGQ 636
Query: 302 LLT-----MYTKCSNLHDALS-VFEAISK------NANLVSWNAILSACLQHKQAGETFR 349
L T C LS + E K N+V+++AIL+AC + +
Sbjct: 637 LTTESNNRTTKDCEEGMQELSCILEVFRKMHQLEIKPNVVTFSAILNACSRCNSFEDASM 696
Query: 350 LFKQMLFSENK 360
L +++ +NK
Sbjct: 697 LLEELRLFDNK 707
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 120/594 (20%), Positives = 246/594 (41%), Gaps = 69/594 (11%)
Query: 22 NVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTFGSIIKACCIAGDIYLGRQLH 81
N V++T+++ + A+ +Y QM+ G D + + ++ AGD+ +
Sbjct: 293 NHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTF 352
Query: 82 AHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMI----SIKDLISWSSMIRGFTQL 137
+++ ++V L+ G ++ A + T + I +++++SSMI G+ +
Sbjct: 353 KMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKK 412
Query: 138 GYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFS 197
G EA+ L R M Q V PN F G+V + E ++ G+ N +
Sbjct: 413 GMLEEAVSLLRKMEDQNVV-PNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYI 471
Query: 198 GCSLCDMYAKCGFLPSAKTAFYQIESP----DLVSWNAIIAAFADSGDANEAISIFRQMM 253
+L + + G + K + S D +++ ++I F GD A++ +M
Sbjct: 472 LDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQ 531
Query: 254 HIGLIPDSITFLSLLCACTSPMALN-----QGMQIHSYIVKVGFNKEVALYNSLLTMYTK 308
G+ D +++ L+ + +GM+ + G ++A +N ++ K
Sbjct: 532 ERGMPWDVVSYNVLISGMLKFGKVGADWAYKGMR------EKGIEPDIATFNIMMNSQRK 585
Query: 309 CSNLHDALSVFEAISK---NANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMIT 365
+ L +++ + +L+S N ++ ++ + E + QM+ E PN+ T
Sbjct: 586 QGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTT 645
Query: 366 ITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTE 425
L T ++ + + H + G+ L V N LI K G A V E
Sbjct: 646 YRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDME 705
Query: 426 ---------------------------------------NPNVISWSSLIVGYAMSGLGH 446
+PNV +++++I G + +GL
Sbjct: 706 ARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIK 765
Query: 447 EALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCM 506
E +M++ G+RP++ TY ++S + IG ++ +Y M + G+ P ++ +
Sbjct: 766 EVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIAD-GLVPKTSTYNVL 824
Query: 507 VDLLARAGCLYEAETFIR---KTGFDPDITTWKTLLSS-CK--THGNVDIAERA 554
+ A G + +A ++ K G P+ +T+ T++S CK TH +V+ ++A
Sbjct: 825 ISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMISGLCKLCTHPDVEWNKKA 878
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 113/557 (20%), Positives = 225/557 (40%), Gaps = 65/557 (11%)
Query: 22 NVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTFGSIIKACCIAGDIYLGRQLH 81
+ V++ ++ISG ++G +EA +M++ G PD +++ ++I C G+ + L
Sbjct: 160 DTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALV 219
Query: 82 AHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIK-DLISWSSMIRGFTQLGYE 140
+ + H + L+S Y N + A M D++++SS+I + G
Sbjct: 220 DEISELNLITHTI----LLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKV 275
Query: 141 IEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKF---GLVRNVFS 197
+E L R+M VY PN ++ SL + R + ++ G+ ++
Sbjct: 276 LEGGLLLREMEEMSVY-PNHVTYTTL---VDSLFKANIYRHALALYSQMVVRGIPVDLVV 331
Query: 198 GCSLCDMYAKCGFLPSAKTAFYQI----ESPDLVSWNAIIAAFADSGDANEAISIFRQMM 253
L D K G L A+ F + + P++V++ A++ +GD + A I QM+
Sbjct: 332 YTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQML 391
Query: 254 HIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLH 313
+IP+ +T Y+S++ Y K L
Sbjct: 392 EKSVIPNVVT-----------------------------------YSSMINGYVKKGMLE 416
Query: 314 DALSVFEAISKN---ANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLL 370
+A+S+ + N ++ ++ + + L K+M + N + L+
Sbjct: 417 EAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALV 476
Query: 371 GTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTENP--- 427
+ ++ + V G+ LD LID++ K G A + +
Sbjct: 477 NHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMP 536
Query: 428 -NVISWSSLIVGYAMSGLGHEALN-LFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWN 485
+V+S++ LI G M G + ++ MR G+ P+ T+ ++++ G E
Sbjct: 537 WDVVSYNVLISG--MLKFGKVGADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILK 594
Query: 486 LYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRK---TGFDPDITTWKTLLSSC 542
L++ M + GI P+ + +V +L G + EA + + P++TT++ L +
Sbjct: 595 LWDKM-KSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTS 653
Query: 543 KTHGNVDIAERAAENIL 559
H D + E +L
Sbjct: 654 SKHKRADAIFKTHETLL 670
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 81/371 (21%), Positives = 159/371 (42%), Gaps = 37/371 (9%)
Query: 190 GLVRNVFSGCSLCDMYAKCGFLPSAKTAFY-QIESPDLVSWNAIIAAFADSGDANEAISI 248
G+ +VF+ L + K G L A + ++ S D V++N +I+ + G A+EA
Sbjct: 124 GVSPDVFALNVLIHSFCKVGRLSFAISLLRNRVISIDTVTYNTVISGLCEHGLADEAYQF 183
Query: 249 FRQMMHIGLIPDSITF----------------------LSLLCACTSPMALNQGMQIHSY 286
+M+ +G++PD++++ +S L T + L+ +H+
Sbjct: 184 LSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTILLSSYYNLHAI 243
Query: 287 ------IVKVGFNKEVALYNSLLTMYTKCSNLHDA---LSVFEAISKNANLVSWNAILSA 337
+V GF+ +V ++S++ K + + L E +S N V++ ++ +
Sbjct: 244 EEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDS 303
Query: 338 CLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLD 397
+ L+ QM+ +++ T L+ + L + ++ V +
Sbjct: 304 LFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPN 363
Query: 398 VSVSNGLIDMYAKCGSVIHAQ----RVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFR 453
V L+D K G + A+ ++ + + PNV+++SS+I GY G+ EA++L R
Sbjct: 364 VVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLR 423
Query: 454 KMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARA 513
KM + V PN TY V+ G E L M +G+ +V+ L R
Sbjct: 424 KMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEM-RLIGVEENNYILDALVNHLKRI 482
Query: 514 GCLYEAETFIR 524
G + E + ++
Sbjct: 483 GRIKEVKGLVK 493
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 94/386 (24%), Positives = 166/386 (43%), Gaps = 55/386 (14%)
Query: 224 PDLVSWNAIIAAFADSGDANEAIS-IFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQ 282
PD WN++I F +G ++ +S I+ +M+ G+ PD ALN +
Sbjct: 91 PDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVF-------------ALN--VL 135
Query: 283 IHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHK 342
IHS + K L A+S+ + + V++N ++S +H
Sbjct: 136 IHS--------------------FCKVGRLSFAISLLRNRVISIDTVTYNTVISGLCEHG 175
Query: 343 QAGETFRLFKQMLFSENKPNMITITNLL-GTCAELASLEVGNQVHCFSVKSGLV-LDVSV 400
A E ++ +M+ P+ ++ L+ G C +VGN V ++ + L++
Sbjct: 176 LADEAYQFLSEMVKMGILPDTVSYNTLIDGFC------KVGNFVRAKALVDEISELNLIT 229
Query: 401 SNGLIDMYAKCGSVIHAQR-VFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLG 459
L+ Y ++ A R + S +P+V+++SS+I G E L R+M +
Sbjct: 230 HTILLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMS 289
Query: 460 VRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEA 519
V PN VTY ++ + + LY+ M GIP ++ ++D L +AG L EA
Sbjct: 290 VYPNHVTYTTLVDSLFKANIYRHALALYSQMVVR-GIPVDLVVYTVLMDGLFKAGDLREA 348
Query: 520 ETFIRKTGFD---PDITTWKTLLSSCKTHGNVDIAERAAENILKLDPSNSAALVLLSSI- 575
E + D P++ T+ L+ G++ AE + L+ S +V SS+
Sbjct: 349 EKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQM--LEKSVIPNVVTYSSMI 406
Query: 576 --HASAGNWED-VAKLRKVLDDGYDP 598
+ G E+ V+ LRK+ D P
Sbjct: 407 NGYVKKGMLEEAVSLLRKMEDQNVVP 432
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 122/548 (22%), Positives = 229/548 (41%), Gaps = 65/548 (11%)
Query: 2 YGKCGSMKDARQVFDAMHL----RNVVSWTSMISGYSQNGQGNEAVVMYIQMLRS-GFFP 56
Y S+ AR+VFD M NV ++ +++GY G+ +A+ M +M+ P
Sbjct: 179 YPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNP 238
Query: 57 DQLTFGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVF 116
D +T+ +I+KA G + ++L + K+G + V N L+ Y G + A +
Sbjct: 239 DNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIV 298
Query: 117 TMIS----IKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSAC-- 170
++ + DL +++ +I G G E L L D ++ QP+ ++ C
Sbjct: 299 ELMKQTNVLPDLCTYNILINGLCNAGSMREGLELM-DAMKSLKLQPDVVTYNTLIDGCFE 357
Query: 171 --SSLLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAF-YQIESPDLV 227
SL + Q+ K V + S LC + K SPD+V
Sbjct: 358 LGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIV 417
Query: 228 SWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYI 287
+++ +I A+ GD + A+ + R+M G+ ++IT ++L A L++ + +
Sbjct: 418 TYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSA 477
Query: 288 VKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISK---NANLVSWNAILSACLQHKQA 344
K GF + Y +L+ + + + AL +++ + K + ++N+++ H +
Sbjct: 478 HKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKT 537
Query: 345 GETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGL 404
F ++ +SGL+ D S N +
Sbjct: 538 ELAMEKFDEL-----------------------------------AESGLLPDDSTFNSI 562
Query: 405 IDMYAKCGSVIHAQRVFDSTE----NPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGV 460
I Y K G V A ++ + P+ + + L+ G G+ +ALN F N +
Sbjct: 563 ILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFF----NTLI 618
Query: 461 RPNE---VTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLY 517
E VTY ++SA ++E ++L + MEE+ G+ P R ++ + LL G L
Sbjct: 619 EEREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEK-GLEPDRFTYNSFISLLMEDGKLS 677
Query: 518 EAETFIRK 525
E + ++K
Sbjct: 678 ETDELLKK 685
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 86/363 (23%), Positives = 157/363 (43%), Gaps = 55/363 (15%)
Query: 192 VRNVFSGCSLCD--MYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIF 249
+R + SLC+ ++ P A + I ++A+ G + A+ IF
Sbjct: 105 IRTSDASLSLCNSLLHPNLHLSPPPSKALFDI----------ALSAYLHEGKPHVALQIF 154
Query: 250 RQMMHIGLIPDSITFLSLLCACT---SPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMY 306
++M+ + L P+ +T +LL S +++ ++ +VK+G + V +N L+ Y
Sbjct: 155 QKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGY 214
Query: 307 TKCSNLHDALSVFEAI----SKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPN 362
L DAL + E + N + V++N IL A + + + L M + PN
Sbjct: 215 CLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPN 274
Query: 363 MITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFD 422
+T NL+ +L SL+ Q+ ++ ++ D+ N LI+ GS+ + D
Sbjct: 275 RVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMD 334
Query: 423 STEN----PNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIG 478
+ ++ P+V+++++LI G GL EA L +M N GV+ N+VT+ +I
Sbjct: 335 AMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTH--------NIS 386
Query: 479 LVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDITTWKTL 538
L W +EE R + + + GF PDI T+ TL
Sbjct: 387 L---KW----LCKEE-----------------KREAVTRKVKELVDMHGFSPDIVTYHTL 422
Query: 539 LSS 541
+ +
Sbjct: 423 IKA 425
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 118/262 (45%), Gaps = 25/262 (9%)
Query: 301 SLLTMYTKCSN---------LHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLF 351
SLL Y + S+ LH L + SK ++ LSA L + ++F
Sbjct: 99 SLLVSYIRTSDASLSLCNSLLHPNLHLSPPPSK----ALFDIALSAYLHEGKPHVALQIF 154
Query: 352 KQMLFSENKPNMITITNLL-GTCAELASLEVGNQVHCFS--VKSGLVLDVSVSNGLIDMY 408
++M+ + KPN++T LL G +S + + F VK G+ L+V N L++ Y
Sbjct: 155 QKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGY 214
Query: 409 AKCGSVIHA-----QRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPN 463
G + A + V + NP+ +++++++ + G + L M+ G+ PN
Sbjct: 215 CLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPN 274
Query: 464 EVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETF- 522
VTY ++ +G ++E + + M ++ + P ++ +++ L AG + E
Sbjct: 275 RVTYNNLVYGYCKLGSLKEAFQIVELM-KQTNVLPDLCTYNILINGLCNAGSMREGLELM 333
Query: 523 --IRKTGFDPDITTWKTLLSSC 542
++ PD+ T+ TL+ C
Sbjct: 334 DAMKSLKLQPDVVTYNTLIDGC 355
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 107/458 (23%), Positives = 191/458 (41%), Gaps = 91/458 (19%)
Query: 22 NVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTFGSIIKACCIAGDIYLGRQLH 81
++V++TS+I+G+ + EA+ M QM+ G PD + + +II + C G + L
Sbjct: 141 DIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLF 200
Query: 82 AHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVF---TMISIK-DLISWSSMIRGFTQL 137
+ G +V L++ N G+ A + T IK D+I+++++I F +
Sbjct: 201 DQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKE 260
Query: 138 GYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFS 197
G ++A L+ +M+R + PN F Y I+G C +
Sbjct: 261 GKFLDAEELYNEMIRMSI-APNIFT---------------YTSLINGFCME--------- 295
Query: 198 GCSLCDMYAKCGFLPSAKTAFYQIES----PDLVSWNAIIAAFADSGDANEAISIFRQMM 253
GC + A+ FY +E+ PD+V++ ++I F ++A+ IF +M
Sbjct: 296 GC-----------VDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMS 344
Query: 254 HIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLH 313
GL ++IT+ +L+ N ++ S++V G + YN LL +
Sbjct: 345 QKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVK 404
Query: 314 DALSVFEAISKN------ANLVSWNAILSACLQHKQAGETFRLFKQMLFSE-NKPNMITI 366
AL +FE + K N+ ++N +L + + + +F+ M E + +
Sbjct: 405 KALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYT 464
Query: 367 TNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTEN 426
+ G C K G V +A +F S +
Sbjct: 465 IIIQGMC------------------------------------KAGKVKNAVNLFCSLPS 488
Query: 427 ----PNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGV 460
PNV++++++I G GL HEA LFRKM+ GV
Sbjct: 489 KGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGV 526
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 106/507 (20%), Positives = 203/507 (40%), Gaps = 49/507 (9%)
Query: 38 QGNEAVVMYIQMLRSGFFPDQLTFGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQN 97
Q NEA+ ++ M+ S P + F ++ + L H+ G L N
Sbjct: 52 QFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCN 111
Query: 98 GLISMYTNFGQVAHASDVF-TMISI---KDLISWSSMIRGFTQLGYEIEALYLFRDMLRQ 153
L++ + Q AS M+ + D+++++S+I GF EA+ + M+
Sbjct: 112 LLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEM 171
Query: 154 GVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPS 213
G+ +P+ + ++ + Y + +G+ +V SL + G
Sbjct: 172 GI-KPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRD 230
Query: 214 AKTAFYQIES----PDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLC 269
A + + PD++++NA+I AF G +A ++ +M+ + + P+ T+ SL+
Sbjct: 231 ADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLIN 290
Query: 270 ACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLV 329
+++ Q+ + G +V Y SL+ + KC + DA+ +F +S
Sbjct: 291 GFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMS------ 344
Query: 330 SWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFS 389
Q G T N IT T L+ ++ V +V
Sbjct: 345 -------------QKGLT-------------GNTITYTTLIQGFGQVGKPNVAQEVFSHM 378
Query: 390 VKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTEN-------PNVISWSSLIVGYAMS 442
V G+ ++ N L+ G V A +F+ + PN+ +++ L+ G +
Sbjct: 379 VSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYN 438
Query: 443 GLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREH 502
G +AL +F MR + +TY ++ G V+ NL+ ++ + G+ P
Sbjct: 439 GKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSK-GVKPNVVT 497
Query: 503 FSCMVDLLARAGCLYEAETFIRKTGFD 529
++ M+ L R G +EA RK D
Sbjct: 498 YTTMISGLFREGLKHEAHVLFRKMKED 524
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 127/303 (41%), Gaps = 53/303 (17%)
Query: 6 GSMKDARQVFDAMHLR----NVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTF 61
G +DA + M R +V+++ ++I + + G+ +A +Y +M+R P+ T+
Sbjct: 226 GRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTY 285
Query: 62 GSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISI 121
S+I C+ G + RQ+ + G +VA LI+ + +V A +F +S
Sbjct: 286 TSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQ 345
Query: 122 KDL----ISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSAC------- 170
K L I+++++I+GF Q+G A +F M+ +GV P +V C
Sbjct: 346 KGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGV--PPNIRTYNVLLHCLCYNGKV 403
Query: 171 -SSLLEPE----------------YGRQIHGIC--AKFGLVRNVFSGCSLCDM------- 204
+L+ E Y +HG+C K VF +M
Sbjct: 404 KKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITY 463
Query: 205 ------YAKCGFLPSAKTAFYQIES----PDLVSWNAIIAAFADSGDANEAISIFRQMMH 254
K G + +A F + S P++V++ +I+ G +EA +FR+M
Sbjct: 464 TIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKE 523
Query: 255 IGL 257
G+
Sbjct: 524 DGV 526
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 109 bits (273), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 112/546 (20%), Positives = 247/546 (45%), Gaps = 51/546 (9%)
Query: 7 SMKDARQVFDAM----HLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTFG 62
+ DA +F M L ++ + ++S ++ + + + + +M R G + T+
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYN 124
Query: 63 SIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHA----SDVFTM 118
+I C I L L ++K G+ +V + L++ Y + +++ A + M
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184
Query: 119 ISIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEY 178
D I+++++I G EA+ L M+++G QPN Y
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGC-QPNLVT---------------Y 228
Query: 179 GRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFAD 238
G ++G+C K G + F+ L + A +IE+ ++V ++ +I +
Sbjct: 229 GVVVNGLC-KRGDIDLAFN------------LLNKMEAA--KIEA-NVVIYSTVIDSLCK 272
Query: 239 SGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVAL 298
++A+++F +M + G+ P+ IT+ SL+ + + ++ S +++ N V
Sbjct: 273 YRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVT 332
Query: 299 YNSLLTMYTKCSNLHDALSVFEAISK---NANLVSWNAILSACLQHKQAGETFRLFKQML 355
+N+L+ + K L +A +++ + K + ++ +++++++ H + E +F+ M+
Sbjct: 333 FNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMI 392
Query: 356 FSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVI 415
+ PN++T L+ + ++ G ++ + GLV + LI + +
Sbjct: 393 SKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCD 452
Query: 416 HAQRVFDSTE----NPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVL 471
+AQ VF +PN++++++L+ G +G +A+ +F ++ + P TY ++
Sbjct: 453 NAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMI 512
Query: 472 SACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFD-- 529
G VE+GW+L+ ++ + G+ P ++ M+ R G EA+ RK D
Sbjct: 513 EGMCKAGKVEDGWDLFCSLSLK-GVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGP 571
Query: 530 -PDITT 534
PD T
Sbjct: 572 LPDSGT 577
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/374 (21%), Positives = 177/374 (47%), Gaps = 14/374 (3%)
Query: 223 SPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQ 282
P +V+ ++++ + ++A+++ QM+ +G PD+ITF +L+ ++ +
Sbjct: 152 EPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVA 211
Query: 283 IHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDA---LSVFEAISKNANLVSWNAILSACL 339
+ +V+ G + Y ++ K ++ A L+ EA AN+V ++ ++ +
Sbjct: 212 LVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLC 271
Query: 340 QHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVS 399
+++ + LF +M +PN+IT ++L+ +++ ++ + +V
Sbjct: 272 KYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVV 331
Query: 400 VSNGLIDMYAKCGSVIHAQRVFDS----TENPNVISWSSLIVGYAMSGLGHEALNLFRKM 455
N LID + K G ++ A++++D + +P++ ++SSLI G+ M EA ++F M
Sbjct: 332 TFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 391
Query: 456 RNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGC 515
+ PN VTY +++ ++EG L+ M + G+ ++ ++ +A
Sbjct: 392 ISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQR-GLVGNTVTYTTLIHGFFQARD 450
Query: 516 LYEAETFIRK---TGFDPDITTWKTLLSSCKTHGNVDIAERAAENIL--KLDPSNSAALV 570
A+ ++ G P+I T+ TLL +G ++ A E + K++P+ +
Sbjct: 451 CDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNI 510
Query: 571 LLSSIHASAGNWED 584
++ + AG ED
Sbjct: 511 MIEGM-CKAGKVED 523
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/346 (22%), Positives = 152/346 (43%), Gaps = 40/346 (11%)
Query: 224 PDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLL-CACTSPMALNQGMQ 282
P + +N +++A A + IS+ +M +G+ + T+ L+ C C ++ +
Sbjct: 83 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRS-QISLALA 141
Query: 283 IHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISK---NANLVSWNAILSACL 339
+ ++K+G+ + +SLL Y + DA+++ + + + + +++ ++
Sbjct: 142 LLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF 201
Query: 340 QHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVS 399
H +A E L +M+ +PN++T G+V++
Sbjct: 202 LHNKASEAVALVDRMVQRGCQPNLVTY--------------------------GVVVNGL 235
Query: 400 VSNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLG 459
G ID+ + + A ++ NV+ +S++I +ALNLF +M N G
Sbjct: 236 CKRGDIDLAFNLLNKMEAAKI-----EANVVIYSTVIDSLCKYRHEDDALNLFTEMENKG 290
Query: 460 VRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEA 519
VRPN +TY ++S + + L + M E I P F+ ++D + G L EA
Sbjct: 291 VRPNVITYSSLISCLCNYERWSDASRLLSDMIER-KINPNVVTFNALIDAFVKEGKLVEA 349
Query: 520 ETF---IRKTGFDPDITTWKTLLSSCKTHGNVDIAERAAENILKLD 562
E + K DPDI T+ +L++ H +D A+ E ++ D
Sbjct: 350 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 395
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 125/558 (22%), Positives = 250/558 (44%), Gaps = 34/558 (6%)
Query: 10 DARQVFDAM----HLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTFGSII 65
DA +F++M L + + + S ++ Q + + M +G D T +I
Sbjct: 53 DAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMI 112
Query: 66 KACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHA-SDVFTMISIK-- 122
C + + K G+ + + L++ + G+V+ A + V M+ +K
Sbjct: 113 NCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQR 172
Query: 123 -DLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFS----ACSSLLEPE 177
DL++ S++I G G EAL L M+ G +QP+E G V + + +S L +
Sbjct: 173 PDLVTVSTLINGLCLKGRVSEALVLIDRMVEYG-FQPDEVTYGPVLNRLCKSGNSALALD 231
Query: 178 YGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIE----SPDLVSWNAII 233
R++ K +V+ SLC K G A + F ++E D+V+++++I
Sbjct: 232 LFRKMEERNIKASVVQYSIVIDSLC----KDGSFDDALSLFNEMEMKGIKADVVTYSSLI 287
Query: 234 AAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFN 293
+ G ++ + R+M+ +IPD +TF +L+ L + ++++ ++ G
Sbjct: 288 GGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIA 347
Query: 294 KEVALYNSLLTMYTKCSNLHDALSVFE-AISK--NANLVSWNAILSACLQHKQAGETFRL 350
+ YNSL+ + K + LH+A +F+ +SK ++V+++ ++++ + K+ + RL
Sbjct: 348 PDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRL 407
Query: 351 FKQMLFSENKPNMITITNL-LGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYA 409
F+++ PN IT L LG C L ++ V G+ V L+D
Sbjct: 408 FREISSKGLIPNTITYNTLVLGFCQS-GKLNAAKELFQEMVSRGVPPSVVTYGILLDGLC 466
Query: 410 KCGSVIHAQRVFDSTENPNVI----SWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEV 465
G + A +F+ + + ++ +I G + +A +LF + + GV+P+ V
Sbjct: 467 DNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVV 526
Query: 466 TYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDL-LARAGCLYEAETF-- 522
TY ++ G + E L+ M+E+ G P ++ ++ L +G + E
Sbjct: 527 TYNVMIGGLCKKGSLSEADMLFRKMKED-GCTPDDFTYNILIRAHLGGSGLISSVELIEE 585
Query: 523 IRKTGFDPDITTWKTLLS 540
++ GF D +T K ++
Sbjct: 586 MKVCGFSADSSTIKMVID 603
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 125/290 (43%), Gaps = 51/290 (17%)
Query: 6 GSMKDARQVFDAMHLRN----VVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTF 61
G D ++ M RN VV+++++I + + G+ EA +Y +M+ G PD +T+
Sbjct: 294 GKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITY 353
Query: 62 GSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISI 121
S+I C ++ Q+ ++ G +V + LI+ Y +V +F IS
Sbjct: 354 NSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISS 413
Query: 122 KDLI----SWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVL-----------GSV 166
K LI ++++++ GF Q G A LF++M+ +GV P V G +
Sbjct: 414 KGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGV--PPSVVTYGILLDGLCDNGEL 471
Query: 167 FSACSSLLEPEYGRQ----------IHGIC--AKFGLVRNVFSGCSLCDMYAKCGFLPSA 214
A + + R IHG+C +K ++F CSL D K
Sbjct: 472 NKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLF--CSLSDKGVK------- 522
Query: 215 KTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITF 264
PD+V++N +I G +EA +FR+M G PD T+
Sbjct: 523 ---------PDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTY 563
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 112/547 (20%), Positives = 234/547 (42%), Gaps = 35/547 (6%)
Query: 2 YGKCGSMKDARQVFDAMHLRNVVS----WTSMISGYSQNGQGNEAVVMYIQMLRSGFFPD 57
YG+ G M AR+ F+ M R + +TS+I Y+ +EA+ +M G
Sbjct: 319 YGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMS 378
Query: 58 QLTFGSIIKACCIAG-----DIYL--GRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVA 110
+T+ I+ AG D + +++H + S +G + A +M V
Sbjct: 379 LVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVR 438
Query: 111 HASD--VFTMISIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFS 168
+ + I+I + +M+ G+T + E + L +F+ L++ + P G + +
Sbjct: 439 EMEEEGIDAPIAI-----YHTMMDGYTMVADEKKGLVVFK-RLKECGFTPTVVTYGCLIN 492
Query: 169 ACSSLLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQI----ESP 224
+ + + ++ + + G+ N+ + + + + K +A F + P
Sbjct: 493 LYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKP 552
Query: 225 DLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIH 284
D++ +N II+AF G+ + AI ++M + P + TF+ ++ + + +++
Sbjct: 553 DVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVF 612
Query: 285 SYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAIS---KNANLVSWNAILSACLQH 341
+ + G V +N L+ + + A+ + + ++ +AN ++ I+
Sbjct: 613 DMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASV 672
Query: 342 KQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVS 401
G+ F F ++ ++ T LL C + ++ V + + V
Sbjct: 673 GDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVY 732
Query: 402 NGLIDMYAKCGSVIHA----QRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRN 457
N LID +A+ G V A Q++ P++ +++S I + +G + A +M
Sbjct: 733 NILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEA 792
Query: 458 LGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMV-DLLARAGCL 516
LGV+PN TY ++ + L E+ + Y M + +GI P + + C++ LL+RA
Sbjct: 793 LGVKPNIKTYTTLIKGWARASLPEKALSCYEEM-KAMGIKPDKAVYHCLLTSLLSRASI- 850
Query: 517 YEAETFI 523
AE +I
Sbjct: 851 --AEAYI 855
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 102/540 (18%), Positives = 219/540 (40%), Gaps = 50/540 (9%)
Query: 36 NGQGNEAVVMYIQMLRSGFFPDQLTFGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVA 95
NG +AV+ + + P + FG ++K GD++ R+ + G
Sbjct: 290 NGDNWQAVISAFEKISK---PSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRI 346
Query: 96 QNGLISMYTNFGQVAHASDVFTMISIK----DLISWSSMIRGFTQLGYEIEALYLFRDML 151
LI Y + A + + L+++S ++ GF++ G+ A Y F +
Sbjct: 347 YTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDE-- 404
Query: 152 RQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFL 211
++IH + +++ C C+M +
Sbjct: 405 ---------------------------AKRIHKTLNASIYGKIIYAHCQTCNMERAEALV 437
Query: 212 PSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCAC 271
+ I++P + ++ ++ + D + + +F+++ G P +T+ L+
Sbjct: 438 REMEEE--GIDAP-IAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLY 494
Query: 272 TSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNA---NL 328
T +++ +++ + + G + Y+ ++ + K + +A +VFE + K ++
Sbjct: 495 TKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDV 554
Query: 329 VSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCF 388
+ +N I+SA + K+M ++P T ++ A+ + +V
Sbjct: 555 ILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDM 614
Query: 389 SVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTE----NPNVISWSSLIVGYAMSGL 444
+ G V V NGLI+ + + A + D + N +++ ++ GYA G
Sbjct: 615 MRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGD 674
Query: 445 GHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFS 504
+A F +++N G+ + TY +L AC G ++ + M IP ++
Sbjct: 675 TGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSAR-NIPRNSFVYN 733
Query: 505 CMVDLLARAGCLYEAETFI---RKTGFDPDITTWKTLLSSCKTHGNVDIAERAAENILKL 561
++D AR G ++EA I +K G PDI T+ + +S+C G+++ A + E + L
Sbjct: 734 ILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEAL 793
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 75/363 (20%), Positives = 153/363 (42%), Gaps = 16/363 (4%)
Query: 1 MYGKCGSMKDARQVFDAMHLR----NVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFP 56
+Y K G + A +V M N+ +++ MI+G+ + A ++ M++ G P
Sbjct: 493 LYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKP 552
Query: 57 DQLTFGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVF 116
D + + +II A C G++ Q + K +I Y G + + +VF
Sbjct: 553 DVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVF 612
Query: 117 TMIS----IKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSS 172
M+ + + +++ +I G + +A+ + +M GV NE + +S
Sbjct: 613 DMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGV-SANEHTYTKIMQGYAS 671
Query: 173 LLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVS---- 228
+ + + GL ++F+ +L K G + SA ++ + ++
Sbjct: 672 VGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFV 731
Query: 229 WNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIV 288
+N +I +A GD EA + +QM G+ PD T+ S + AC+ +N+ Q +
Sbjct: 732 YNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEME 791
Query: 289 KVGFNKEVALYNSLLTMYTKCSNLHDALSVFE---AISKNANLVSWNAILSACLQHKQAG 345
+G + Y +L+ + + S ALS +E A+ + ++ +L++ L
Sbjct: 792 ALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIA 851
Query: 346 ETF 348
E +
Sbjct: 852 EAY 854
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 103/475 (21%), Positives = 207/475 (43%), Gaps = 47/475 (9%)
Query: 7 SMKDARQVFDAM----HLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTFG 62
+ DA +F M ++V + ++S + + + + + +M G D TF
Sbjct: 65 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124
Query: 63 SIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHA-SDVFTMISI 121
+I C + L + ++K G+ V L++ + +V+ A S V M+ I
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184
Query: 122 ---KDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEY 178
D+++++++I + +A F+++ R+G+ +PN Y
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGI-RPNVVT---------------Y 228
Query: 179 GRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFAD 238
++G+C R + L DM K +I +P++++++A++ AF
Sbjct: 229 TALVNGLCNS---SRWSDAARLLSDMIKK------------KI-TPNVITYSALLDAFVK 272
Query: 239 SGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVAL 298
+G EA +F +M+ + + PD +T+ SL+ +++ Q+ +V G +V
Sbjct: 273 NGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVS 332
Query: 299 YNSLLTMYTKCSNLHDALSVFEAISKN---ANLVSWNAILSACLQHKQAGETFRLFKQML 355
YN+L+ + K + D + +F +S+ +N V++N ++ Q + F QM
Sbjct: 333 YNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMD 392
Query: 356 FSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVI 415
F P++ T LLG + LE + K + LD+ +I K G V
Sbjct: 393 FFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVE 452
Query: 416 HAQRVFDSTE----NPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVT 466
A +F S P+++++++++ G GL HE L+ KM+ G+ N+ T
Sbjct: 453 EAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCT 507
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/355 (20%), Positives = 160/355 (45%), Gaps = 27/355 (7%)
Query: 10 DARQVFDAM----HLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTFGSII 65
DA + D M + ++V++ ++I + + N+A + ++ R G P+ +T+ +++
Sbjct: 173 DAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALV 232
Query: 66 KACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVF---TMISIK 122
C + +L + +IK +++ + L+ + G+V A ++F +SI
Sbjct: 233 NGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSID 292
Query: 123 -DLISWSSMIRGFTQLGYEIEALYLFRDMLRQG----VYQPNEFVLGSVFSACSSLLEPE 177
D++++SS+I G EA +F M+ +G V N + G F + E
Sbjct: 293 PDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLING--FCKAKRV---E 347
Query: 178 YGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIE----SPDLVSWNAII 233
G ++ ++ GLV N + +L + + G + A+ F Q++ SPD+ ++N ++
Sbjct: 348 DGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILL 407
Query: 234 AAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFN 293
D+G+ +A+ IF M + D +T+ +++ + + + + G
Sbjct: 408 GGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLK 467
Query: 294 KEVALYNSLLTMYTKCSNLHDALSVF-----EAISKN-ANLVSWNAILSACLQHK 342
++ Y ++++ LH+ +++ E + KN L + LSA L K
Sbjct: 468 PDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSDGDITLSAELIKK 522
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 111/485 (22%), Positives = 207/485 (42%), Gaps = 22/485 (4%)
Query: 107 GQVAHASDVF-TMISIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGS 165
G +A D+F +S+ D ++ + + F G +L LF+ M RQ +PNE +
Sbjct: 90 GSIARCLDIFKNKLSLND---FALVFKEFAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTI 146
Query: 166 VFSACSSLLEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIE--- 222
+ S + ++ G+ R+VFS +L + Y + G ++ +++
Sbjct: 147 MISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEK 206
Query: 223 -SPDLVSWNAIIAAFADSG-DANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQG 280
SP ++++N +I A A G D + +F +M H G+ PD +T+ +LL AC ++
Sbjct: 207 ISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEA 266
Query: 281 MQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANL---VSWNAILSA 337
+ + G ++ Y+ L+ + K L + ++ +L S+N +L A
Sbjct: 267 EMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEA 326
Query: 338 CLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLD 397
+ E +F QM + PN T + LL + + Q+ S D
Sbjct: 327 YAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPD 386
Query: 398 VSVSNGLIDMYAKCGSVIHAQRVF-DSTEN---PNVISWSSLIVGYAMSGLGHEALNLFR 453
+ N LI+++ + G +F D E P++ ++ +I GL +A + +
Sbjct: 387 AATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQ 446
Query: 454 KMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARA 513
M + P+ Y GV+ A L EE +NTM E +G P+ E F ++ AR
Sbjct: 447 YMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHE-VGSNPSIETFHSLLYSFARG 505
Query: 514 GCLYEAETFIRK---TGFDPDITTWKTLLSSCKTHGNVDIAERAAENILK--LDPSNSAA 568
G + E+E + + +G + T+ + + K G + A + ++ K DP
Sbjct: 506 GLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTL 565
Query: 569 LVLLS 573
+LS
Sbjct: 566 EAVLS 570
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 128/600 (21%), Positives = 231/600 (38%), Gaps = 142/600 (23%)
Query: 1 MYGKCGSMKDARQVFDAMHL----RNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFP 56
+ G+ G + +VFD M R+V S+T++I+ Y +NG+ ++ + +M P
Sbjct: 150 LLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISP 209
Query: 57 DQLTFGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVF 116
LT+ ++I AC G + GL+ + F ++ H
Sbjct: 210 SILTYNTVINACARGG---------------------LDWEGLLGL---FAEMRHEGIQP 245
Query: 117 TMISIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEP 176
+++ L+S + IRG EA +FR M G+ P+ + S L+E
Sbjct: 246 DIVTYNTLLS-ACAIRGLGD-----EAEMVFRTMNDGGIV-PD-------LTTYSHLVE- 290
Query: 177 EYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAF 236
FG +R + C L A G LP D+ S+N ++ A+
Sbjct: 291 -----------TFGKLRRLEKVCDLLGEMASGGSLP------------DITSYNVLLEAY 327
Query: 237 ADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEV 296
A SG EA+ +F QM G P++ T
Sbjct: 328 AKSGSIKEAMGVFHQMQAAGCTPNANT--------------------------------- 354
Query: 297 ALYNSLLTMYTKCSNLHDALSVF---EAISKNANLVSWNAILSACLQHKQAGETFRLFKQ 353
Y+ LL ++ + D +F ++ + + + ++N ++ + E LF
Sbjct: 355 --YSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHD 412
Query: 354 MLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGS 413
M+ +P+M T ++ C K GL D I Y
Sbjct: 413 MVEENIEPDMETYEGIIFACG----------------KGGLHEDARK----ILQYMTAND 452
Query: 414 VIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSA 473
++ P+ +++ +I + + L EAL F M +G P+ T+ +L +
Sbjct: 453 IV-----------PSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYS 501
Query: 474 CSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEA-ETFI--RKTGFDP 530
+ GLV+E + + + + GIP R+ F+ ++ + G EA +T++ K+ DP
Sbjct: 502 FARGGLVKESEAILSRLVDS-GIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDP 560
Query: 531 DITTWKTLLSSCKTHGNVDIAERAAENILKLD--PSNSAALVLLSSIHASAGNWEDVAKL 588
D T + +LS VD E + D PS ++L +++ W+DV +L
Sbjct: 561 DERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCMML-AVYGKTERWDDVNEL 619
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/382 (19%), Positives = 166/382 (43%), Gaps = 15/382 (3%)
Query: 232 IIAAFADSGDANEAISIFRQMM-HIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKV 290
+ FA GD ++ +F+ M I P+ + ++ L++ +++ +
Sbjct: 111 VFKEFAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQ 170
Query: 291 GFNKEVALYNSLLTMYTKCSNLHDALSVFEAISK---NANLVSWNAILSACLQHKQAGE- 346
G ++ V Y +L+ Y + +L + + + + +++++N +++AC + E
Sbjct: 171 GVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEG 230
Query: 347 TFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLID 406
LF +M +P+++T LL CA + V G+V D++ + L++
Sbjct: 231 LLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVE 290
Query: 407 MYAKCGSVIHAQRVFDSTEN----PNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRP 462
+ K + + + P++ S++ L+ YA SG EA+ +F +M+ G P
Sbjct: 291 TFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTP 350
Query: 463 NEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETF 522
N TY +L+ G ++ L+ M+ P A ++ ++++ G E T
Sbjct: 351 NANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDA-ATYNILIEVFGEGGYFKEVVTL 409
Query: 523 IR---KTGFDPDITTWKTLLSSCKTHGNVDIAERAAENILKLD--PSNSAALVLLSSIHA 577
+ +PD+ T++ ++ +C G + A + + + D PS+ A ++ +
Sbjct: 410 FHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQ 469
Query: 578 SAGNWEDVAKLRKVLDDGYDPA 599
+A E + + + G +P+
Sbjct: 470 AALYEEALVAFNTMHEVGSNPS 491
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 109/482 (22%), Positives = 207/482 (42%), Gaps = 47/482 (9%)
Query: 20 LRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTFGSIIKACCIAGDIYLGRQ 79
L + +S + GY EAV ++ QM+ G P +TF ++I C+ G +
Sbjct: 188 LEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAA 247
Query: 80 LHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMIS---IK-DLISWSSMIRGFT 135
L ++ G +V +++ G A ++ + + IK D++ +S++I
Sbjct: 248 LVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLC 307
Query: 136 QLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNV 195
+ G+ +A YLF +ML +G+ PN F Y I G C+ FG R
Sbjct: 308 KDGHHSDAQYLFSEMLEKGI-APNVFT---------------YNCMIDGFCS-FG--RWS 348
Query: 196 FSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHI 255
+ L DM + +I +PD++++NA+I+A G EA + +M+H
Sbjct: 349 DAQRLLRDMIER------------EI-NPDVLTFNALISASVKEGKLFEAEKLCDEMLHR 395
Query: 256 GLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDA 315
+ PD++T+ S++ + + + + +V +N+++ +Y + + +
Sbjct: 396 CIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTIIDVYCRAKRVDEG 451
Query: 316 LSVFEAISKN---ANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGT 372
+ + IS+ AN ++N ++ + LF++M+ P+ IT LL
Sbjct: 452 MQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYG 511
Query: 373 CAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTE----NPN 428
E LE ++ S + LD N +I K V A +F S P+
Sbjct: 512 FCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPD 571
Query: 429 VISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYN 488
V +++ +I G+ +A LF KM++ G P+ TY ++ C G +++ L +
Sbjct: 572 VQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELIS 631
Query: 489 TM 490
M
Sbjct: 632 EM 633
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 106/557 (19%), Positives = 237/557 (42%), Gaps = 75/557 (13%)
Query: 11 ARQVFDAMHLR----NVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTFGSIIK 66
A ++ M +R N+ S+ +I + + + ++ + ++ + GF PD +TF +++
Sbjct: 125 AISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLH 184
Query: 67 ACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIKDLIS 126
C+ I L +++++GF L A ++++ ++ V I+
Sbjct: 185 GLCLEDRISEALALFGYMVETGF---LEA----VALFDQMVEIGLTPVV---------IT 228
Query: 127 WSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGIC 186
++++I G G +EA L M+ +G++ + YG ++G+C
Sbjct: 229 FNTLINGLCLEGRVLEAAALVNKMVGKGLH----------------IDVVTYGTIVNGMC 272
Query: 187 AKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIES----PDLVSWNAIIAAFADSGDA 242
K G SA ++E PD+V ++AII G
Sbjct: 273 --------------------KMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHH 312
Query: 243 NEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSL 302
++A +F +M+ G+ P+ T+ ++ S + ++ +++ N +V +N+L
Sbjct: 313 SDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNAL 372
Query: 303 LTMYTKCSNLHDALSVFEAISKN---ANLVSWNAILSACLQHKQAGETFRLFKQMLFSEN 359
++ K L +A + + + + V++N+++ +H + + +F M
Sbjct: 373 ISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA---- 428
Query: 360 KPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQR 419
P+++T ++ ++ G Q+ + GLV + + N LI + + ++ AQ
Sbjct: 429 SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQD 488
Query: 420 VFDSTEN----PNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACS 475
+F + P+ I+ + L+ G+ + EAL LF ++ + + V Y ++
Sbjct: 489 LFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMC 548
Query: 476 HIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRK---TGFDPDI 532
V+E W+L+ ++ G+ P + ++ M+ + +A K G +PD
Sbjct: 549 KGSKVDEAWDLFCSLPIH-GVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDN 607
Query: 533 TTWKTLLSSCKTHGNVD 549
+T+ TL+ C G +D
Sbjct: 608 STYNTLIRGCLKAGEID 624
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/364 (19%), Positives = 151/364 (41%), Gaps = 51/364 (14%)
Query: 4 KCGSMKDARQVFDAMHLR----NVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQL 59
K G DA+ +F M + NV ++ MI G+ G+ ++A + M+ PD L
Sbjct: 308 KDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVL 367
Query: 60 TFGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMI 119
TF ++I A G ++ +L ++ V N +I + + A +F ++
Sbjct: 368 TFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM 427
Query: 120 SIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYG 179
+ D+++++++I + + E + L R++ R+G+ Y
Sbjct: 428 ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANT----------------TTYN 471
Query: 180 RQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIES----PDLVSWNAIIAA 235
IHG C V N L +A+ F ++ S PD ++ N ++
Sbjct: 472 TLIHGFCE----VDN----------------LNAAQDLFQEMISHGVCPDTITCNILLYG 511
Query: 236 FADSGDANEAISIFR--QMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFN 293
F ++ EA+ +F QM I L D++ + ++ +++ + + G
Sbjct: 512 FCENEKLEEALELFEVIQMSKIDL--DTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVE 569
Query: 294 KEVALYNSLLTMYTKCSNLHDALSVFEAISKNA---NLVSWNAILSACLQHKQAGETFRL 350
+V YN +++ + S + DA +F + N + ++N ++ CL+ + ++ L
Sbjct: 570 PDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIEL 629
Query: 351 FKQM 354
+M
Sbjct: 630 ISEM 633
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 80/338 (23%), Positives = 137/338 (40%), Gaps = 56/338 (16%)
Query: 227 VSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCAC-TSPMALNQGMQIHS 285
V N +I F + AIS++R+M I IP +I ++L C L+ +
Sbjct: 107 VDCNKVIGVFVRMNRPDVAISLYRKM-EIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFG 165
Query: 286 YIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAG 345
+ K+GF +V +N+LL + +AL++F + + L
Sbjct: 166 KLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFL----------------- 208
Query: 346 ETFRLFKQMLFSENKPNMITITNLL-GTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGL 404
E LF QM+ P +IT L+ G C E LE V+ V GL +DV
Sbjct: 209 EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKM-VGKGLHIDV------ 261
Query: 405 IDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNE 464
+++ +++ G G ALNL KM ++P+
Sbjct: 262 -------------------------VTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDV 296
Query: 465 VTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIR 524
V Y ++ G + L++ M E+ GI P ++CM+D G +A+ +R
Sbjct: 297 VIYSAIIDRLCKDGHHSDAQYLFSEMLEK-GIAPNVFTYNCMIDGFCSFGRWSDAQRLLR 355
Query: 525 ---KTGFDPDITTWKTLLSSCKTHGNVDIAERAAENIL 559
+ +PD+ T+ L+S+ G + AE+ + +L
Sbjct: 356 DMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEML 393
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 134/300 (44%), Gaps = 48/300 (16%)
Query: 4 KCGSMKDARQVFDAMHLR----NVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQL 59
K G + +A ++ D M R + V++ SMI G+ ++ + ++A M+ M PD +
Sbjct: 378 KEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVV 433
Query: 60 TFGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFT-M 118
TF +II C A + G QL + + G + N LI + + A D+F M
Sbjct: 434 TFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEM 493
Query: 119 IS---IKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLE 175
IS D I+ + ++ GF + EAL LF V Q ++ L +V
Sbjct: 494 ISHGVCPDTITCNILLYGFCENEKLEEALELFE------VIQMSKIDLDTV--------- 538
Query: 176 PEYGRQIHGIC--AKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAII 233
Y IHG+C +K ++F CSL + +E PD+ ++N +I
Sbjct: 539 -AYNIIIHGMCKGSKVDEAWDLF--CSL---------------PIHGVE-PDVQTYNVMI 579
Query: 234 AAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFN 293
+ F ++A +F +M G PD+ T+ +L+ C +++ +++ S + GF+
Sbjct: 580 SGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFS 639
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 111/509 (21%), Positives = 216/509 (42%), Gaps = 53/509 (10%)
Query: 22 NVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTFGSIIKACCIAGDIYLGRQLH 81
NV ++T I + G+ NEA + +M G PD +T+ +I A C A + +++
Sbjct: 257 NVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVF 316
Query: 82 AHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMIS-------IKDLISWSSMIRGF 134
K G H + I++ F V S + D+++++ ++
Sbjct: 317 E---KMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDAL 373
Query: 135 TQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRN 194
+ G EA M QG+ PN ++ + + ++ G G+
Sbjct: 374 CKAGNFGEAFDTLDVMRDQGIL-PNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPT 432
Query: 195 VFSGCSLCDMYAKCGFLPSAKTAFYQIES----PDLVSWNAIIAAFADSGDANEAISIFR 250
++ D Y K G SA F ++++ P++V+ NA + + A +G EA IF
Sbjct: 433 AYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFY 492
Query: 251 QMMHIGLIPDSITFLSLLCACTSPMA-LNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKC 309
+ IGL+PDS+T+ +++ C S + +++ +++ S +++ G +V + NSL+ K
Sbjct: 493 GLKDIGLVPDSVTY-NMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKA 551
Query: 310 SNLHDALSVF---EAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITI 366
+ +A +F + + +V++N +L+ ++ + E LF+ M+ PN IT
Sbjct: 552 DRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITF 611
Query: 367 TNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTEN 426
L C + L + + ++DM G V
Sbjct: 612 NTLF---------------DCLCKNDEVTLALKMLFKMMDM----GCV------------ 640
Query: 427 PNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNL 486
P+V +++++I G +G EA+ F +M+ L V P+ VT +L L+E+ + +
Sbjct: 641 PDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL-VYPDFVTLCTLLPGVVKASLIEDAYKI 699
Query: 487 YNTMEEELGIPPAREHFSCMV-DLLARAG 514
PA + ++ +LA AG
Sbjct: 700 ITNFLYNCADQPANLFWEDLIGSILAEAG 728
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 111/550 (20%), Positives = 226/550 (41%), Gaps = 70/550 (12%)
Query: 18 MHLR-NVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTFGSIIKACCIAGDIYL 76
M L+ VV++ ++++G +NG+ EA+ ++ M++ G P+ +TF ++ C ++ L
Sbjct: 567 MKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTL 626
Query: 77 GRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMIS---IKDLISWSSMIRG 133
++ ++ G + N +I GQV A F + D ++ +++ G
Sbjct: 627 ALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPG 686
Query: 134 FTQLGYEIEALYLFRDMLRQGVYQPN----EFVLGSVFSACSSLLEPEYGRQI--HGICA 187
+ +A + + L QP E ++GS+ + + ++ +GIC
Sbjct: 687 VVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICR 746
Query: 188 KFG--LVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIES-----PDLVSWNAIIAAFADSG 240
LV + C K + A+T F + P L ++N +I ++
Sbjct: 747 DGDSILVPIIRYSC-------KHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEAD 799
Query: 241 DANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYN 300
A +F Q+ G IPD VA YN
Sbjct: 800 MIEIAQDVFLQVKSTGCIPD-----------------------------------VATYN 824
Query: 301 SLLTMYTKCSNLHDALSVFEAISKN---ANLVSWNAILSACLQHKQAGETFRLFKQMLFS 357
LL Y K + + +++ +S + AN ++ N ++S ++ + L+ ++
Sbjct: 825 FLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSD 884
Query: 358 EN-KPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIH 416
+ P T L+ ++ L Q+ + G + ++ N LI+ + K G
Sbjct: 885 RDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADA 944
Query: 417 A----QRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLS 472
A +R+ P++ ++S L+ M G E L+ F++++ G+ P+ V Y +++
Sbjct: 945 ACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIIN 1004
Query: 473 ACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETF---IRKTGFD 529
+EE L+N M+ GI P ++ ++ L AG + EA I++ G +
Sbjct: 1005 GLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLE 1064
Query: 530 PDITTWKTLL 539
P++ T+ L+
Sbjct: 1065 PNVFTFNALI 1074
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 120/611 (19%), Positives = 247/611 (40%), Gaps = 103/611 (16%)
Query: 4 KCGSMKDARQVFDAMH----LRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQL 59
K G+ +A D M L N+ ++ ++I G + + ++A+ ++ M G P
Sbjct: 375 KAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAY 434
Query: 60 TFGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMI 119
T+ I +GD + + G ++VA N + G+ A +F +
Sbjct: 435 TYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGL 494
Query: 120 S----IKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLE 175
+ D ++++ M++ ++++G EA+ L +M+ G +P+ V+ S
Sbjct: 495 KDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGC-EPDVIVVNS---------- 543
Query: 176 PEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIE----SPDLVSWNA 231
L + K + A F +++ P +V++N
Sbjct: 544 -------------------------LINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNT 578
Query: 232 IIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLL-CACTSPMALNQGMQIHSYIVKV 290
++A +G EAI +F M+ G P++ITF +L C C + + +++ ++ +
Sbjct: 579 LLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKND-EVTLALKMLFKMMDM 637
Query: 291 GFNKEVALYNSLLTMYTKCSNLHDALSVFEAISK--NANLVSWNAILSACLQHKQAGETF 348
G +V YN+++ K + +A+ F + K + V+ +L ++ + +
Sbjct: 638 GCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKASLIEDAY 697
Query: 349 RLFKQMLFS-ENKPNMITITNLLGTCAELASLEVGNQVHCFS---VKSGLVLD------- 397
++ L++ ++P + +L+G+ LA + N V FS V +G+ D
Sbjct: 698 KIITNFLYNCADQPANLFWEDLIGSI--LAEAGIDNAVS-FSERLVANGICRDGDSILVP 754
Query: 398 ----------VSVSNGLIDMYAK--------------CGSVIHA------QRVFDSTEN- 426
VS + L + + K G ++ A Q VF ++
Sbjct: 755 IIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKST 814
Query: 427 ---PNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEG 483
P+V +++ L+ Y SG E L+++M N +T+ V+S G V++
Sbjct: 815 GCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDA 874
Query: 484 WNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIR---KTGFDPDITTWKTLLS 540
+LY + + P + ++D L+++G LYEA+ G P+ + L++
Sbjct: 875 LDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILIN 934
Query: 541 SCKTHGNVDIA 551
G D A
Sbjct: 935 GFGKAGEADAA 945
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 96/474 (20%), Positives = 191/474 (40%), Gaps = 63/474 (13%)
Query: 142 EALYLFRDMLRQGVYQPNEFVLGSVFSACS---SLLEPEYG-RQIHGICAKFGLVRNVFS 197
E Y+F D++++ + + + ++F + S L + Y R++ +FG V N +S
Sbjct: 136 EMAYVF-DLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMR----EFGFVLNAYS 190
Query: 198 GCSLCDMYAKCGFLPSAKTAFYQIE----SPDLVSWNAIIAAFADSGDANEAISIFRQMM 253
L + K F A + ++ P L ++++++ D + + + ++M
Sbjct: 191 YNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEME 250
Query: 254 HIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLH 313
+GL P+ TF + +N+ +I + G +V Y L+ L
Sbjct: 251 TLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLD 310
Query: 314 DALSVFEAI-------------------SKNANL-------------------VSWNAIL 335
A VFE + S N +L V++ ++
Sbjct: 311 CAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILV 370
Query: 336 SACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLV 395
A + GE F M PN+ T L+ C L + + + F L
Sbjct: 371 DALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLI--CGLLRVHRLDDALELFGNMESLG 428
Query: 396 LDVSVSNGL--IDMYAKCGSVIHAQRVFDSTEN----PNVISWSSLIVGYAMSGLGHEAL 449
+ + + ID Y K G + A F+ + PN+++ ++ + A +G EA
Sbjct: 429 VKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAK 488
Query: 450 NLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDL 509
+F ++++G+ P+ VTY ++ S +G ++E L + M E G P + +++
Sbjct: 489 QIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMEN-GCEPDVIVVNSLINT 547
Query: 510 LARAGCLYEA-ETFIR--KTGFDPDITTWKTLLSSCKTHGNVDIAERAAENILK 560
L +A + EA + F+R + P + T+ TLL+ +G + A E +++
Sbjct: 548 LYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQ 601
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/189 (21%), Positives = 88/189 (46%), Gaps = 10/189 (5%)
Query: 4 KCGSMKDARQVFDAMH----LRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQL 59
K G + +A+Q+F+ M N + +I+G+ + G+ + A ++ +M++ G PD
Sbjct: 903 KSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLK 962
Query: 60 TFGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMI 119
T+ ++ C+ G + G + +SG +V N +I+ ++ A +F +
Sbjct: 963 TYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEM 1022
Query: 120 S-----IKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLL 174
DL +++S+I G EA ++ ++ R G+ +PN F ++ S
Sbjct: 1023 KTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGL-EPNVFTFNALIRGYSLSG 1081
Query: 175 EPEYGRQIH 183
+PE+ ++
Sbjct: 1082 KPEHAYAVY 1090
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 108/253 (42%), Gaps = 26/253 (10%)
Query: 315 ALSVFEAISKNANLV----SWNAILSACLQHKQAGE---TFRLFKQMLFSENKPNMITIT 367
+ S F++++ N NLV + N +L A + E F L ++ + + +TI
Sbjct: 101 SFSYFKSVAGNLNLVHTTETCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIF 160
Query: 368 NLLGTCAELASLEVGNQVHCFSVKS----GLVLDVSVSNGLIDMYAKCGSVIHAQRVFDS 423
L S++ G + ++++ G VL+ NGLI + K A V+
Sbjct: 161 KSL-------SVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRR 213
Query: 424 TE----NPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGL 479
P++ ++SSL+VG + L ++M LG++PN T+ + G
Sbjct: 214 MILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGK 273
Query: 480 VEEGWNLYNTMEEELGIPPAREHFSCMVDLLARA---GCLYEAETFIRKTGFDPDITTWK 536
+ E + + M++E G P ++ ++D L A C E ++ PD T+
Sbjct: 274 INEAYEILKRMDDE-GCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYI 332
Query: 537 TLLSSCKTHGNVD 549
TLL + ++D
Sbjct: 333 TLLDRFSDNRDLD 345
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 109/483 (22%), Positives = 207/483 (42%), Gaps = 47/483 (9%)
Query: 20 LRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTFGSIIKACCIAGDIYLGRQ 79
L + +S + GY EAV ++ QM+ G P +TF ++I C+ G +
Sbjct: 188 LEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAA 247
Query: 80 LHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMIS---IK-DLISWSSMIRGFT 135
L ++ G +V +++ G A ++ + + IK D++ +S++I
Sbjct: 248 LVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLC 307
Query: 136 QLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGICAKFGLVRNV 195
+ G+ +A YLF +ML +G+ PN F Y I G C+ FG R
Sbjct: 308 KDGHHSDAQYLFSEMLEKGI-APNVFT---------------YNCMIDGFCS-FG--RWS 348
Query: 196 FSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHI 255
+ L DM + +I +PD++++NA+I+A G EA + +M+H
Sbjct: 349 DAQRLLRDMIER------------EI-NPDVLTFNALISASVKEGKLFEAEKLCDEMLHR 395
Query: 256 GLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDA 315
+ PD++T+ S++ + + + + +V +N+++ +Y + + +
Sbjct: 396 CIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTIIDVYCRAKRVDEG 451
Query: 316 LSVFEAISKN---ANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITITNLLGT 372
+ + IS+ AN ++N ++ + LF++M+ P+ IT LL
Sbjct: 452 MQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYG 511
Query: 373 CAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTE----NPN 428
E LE ++ S + LD N +I K V A +F S P+
Sbjct: 512 FCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPD 571
Query: 429 VISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLYN 488
V +++ +I G+ +A LF KM++ G P+ TY ++ C G +++ L +
Sbjct: 572 VQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELIS 631
Query: 489 TME 491
M
Sbjct: 632 EMR 634
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 106/557 (19%), Positives = 237/557 (42%), Gaps = 75/557 (13%)
Query: 11 ARQVFDAMHLR----NVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTFGSIIK 66
A ++ M +R N+ S+ +I + + + ++ + ++ + GF PD +TF +++
Sbjct: 125 AISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLH 184
Query: 67 ACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMISIKDLIS 126
C+ I L +++++GF L A ++++ ++ V I+
Sbjct: 185 GLCLEDRISEALALFGYMVETGF---LEA----VALFDQMVEIGLTPVV---------IT 228
Query: 127 WSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQIHGIC 186
++++I G G +EA L M+ +G++ + YG ++G+C
Sbjct: 229 FNTLINGLCLEGRVLEAAALVNKMVGKGLH----------------IDVVTYGTIVNGMC 272
Query: 187 AKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIE----SPDLVSWNAIIAAFADSGDA 242
K G SA ++E PD+V ++AII G
Sbjct: 273 --------------------KMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHH 312
Query: 243 NEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSL 302
++A +F +M+ G+ P+ T+ ++ S + ++ +++ N +V +N+L
Sbjct: 313 SDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNAL 372
Query: 303 LTMYTKCSNLHDALSVFEAISKN---ANLVSWNAILSACLQHKQAGETFRLFKQMLFSEN 359
++ K L +A + + + + V++N+++ +H + + +F M
Sbjct: 373 ISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA---- 428
Query: 360 KPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQR 419
P+++T ++ ++ G Q+ + GLV + + N LI + + ++ AQ
Sbjct: 429 SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQD 488
Query: 420 VFDSTEN----PNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACS 475
+F + P+ I+ + L+ G+ + EAL LF ++ + + V Y ++
Sbjct: 489 LFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMC 548
Query: 476 HIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRK---TGFDPDI 532
V+E W+L+ ++ G+ P + ++ M+ + +A K G +PD
Sbjct: 549 KGSKVDEAWDLFCSLPIH-GVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDN 607
Query: 533 TTWKTLLSSCKTHGNVD 549
+T+ TL+ C G +D
Sbjct: 608 STYNTLIRGCLKAGEID 624
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/364 (19%), Positives = 151/364 (41%), Gaps = 51/364 (14%)
Query: 4 KCGSMKDARQVFDAMHLR----NVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQL 59
K G DA+ +F M + NV ++ MI G+ G+ ++A + M+ PD L
Sbjct: 308 KDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVL 367
Query: 60 TFGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMI 119
TF ++I A G ++ +L ++ V N +I + + A +F ++
Sbjct: 368 TFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM 427
Query: 120 SIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYG 179
+ D+++++++I + + E + L R++ R+G+ Y
Sbjct: 428 ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANT----------------TTYN 471
Query: 180 RQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIES----PDLVSWNAIIAA 235
IHG C V N L +A+ F ++ S PD ++ N ++
Sbjct: 472 TLIHGFCE----VDN----------------LNAAQDLFQEMISHGVCPDTITCNILLYG 511
Query: 236 FADSGDANEAISIFR--QMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFN 293
F ++ EA+ +F QM I L D++ + ++ +++ + + G
Sbjct: 512 FCENEKLEEALELFEVIQMSKIDL--DTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVE 569
Query: 294 KEVALYNSLLTMYTKCSNLHDALSVFEAISKNA---NLVSWNAILSACLQHKQAGETFRL 350
+V YN +++ + S + DA +F + N + ++N ++ CL+ + ++ L
Sbjct: 570 PDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIEL 629
Query: 351 FKQM 354
+M
Sbjct: 630 ISEM 633
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 80/338 (23%), Positives = 137/338 (40%), Gaps = 56/338 (16%)
Query: 227 VSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCAC-TSPMALNQGMQIHS 285
V N +I F + AIS++R+M I IP +I ++L C L+ +
Sbjct: 107 VDCNKVIGVFVRMNRPDVAISLYRKM-EIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFG 165
Query: 286 YIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAG 345
+ K+GF +V +N+LL + +AL++F + + L
Sbjct: 166 KLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFL----------------- 208
Query: 346 ETFRLFKQMLFSENKPNMITITNLL-GTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGL 404
E LF QM+ P +IT L+ G C E LE V+ V GL +DV
Sbjct: 209 EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKM-VGKGLHIDV------ 261
Query: 405 IDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNE 464
+++ +++ G G ALNL KM ++P+
Sbjct: 262 -------------------------VTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDV 296
Query: 465 VTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIR 524
V Y ++ G + L++ M E+ GI P ++CM+D G +A+ +R
Sbjct: 297 VIYSAIIDRLCKDGHHSDAQYLFSEMLEK-GIAPNVFTYNCMIDGFCSFGRWSDAQRLLR 355
Query: 525 ---KTGFDPDITTWKTLLSSCKTHGNVDIAERAAENIL 559
+ +PD+ T+ L+S+ G + AE+ + +L
Sbjct: 356 DMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEML 393
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 134/300 (44%), Gaps = 48/300 (16%)
Query: 4 KCGSMKDARQVFDAMHLR----NVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQL 59
K G + +A ++ D M R + V++ SMI G+ ++ + ++A M+ M PD +
Sbjct: 378 KEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVV 433
Query: 60 TFGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFT-M 118
TF +II C A + G QL + + G + N LI + + A D+F M
Sbjct: 434 TFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEM 493
Query: 119 IS---IKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLE 175
IS D I+ + ++ GF + EAL LF V Q ++ L +V
Sbjct: 494 ISHGVCPDTITCNILLYGFCENEKLEEALELFE------VIQMSKIDLDTV--------- 538
Query: 176 PEYGRQIHGIC--AKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAII 233
Y IHG+C +K ++F CSL + +E PD+ ++N +I
Sbjct: 539 -AYNIIIHGMCKGSKVDEAWDLF--CSL---------------PIHGVE-PDVQTYNVMI 579
Query: 234 AAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFN 293
+ F ++A +F +M G PD+ T+ +L+ C +++ +++ S + GF+
Sbjct: 580 SGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFS 639
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 126/637 (19%), Positives = 264/637 (41%), Gaps = 64/637 (10%)
Query: 2 YGKCGSMKDARQVFDAMHLR----NVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPD 57
+ K G + A + D M ++V + I + + G+ + A + ++ +G PD
Sbjct: 213 FAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPD 272
Query: 58 QLTFGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFT 117
++T+ S+I C A + ++ H+ K+ A N +I Y + G+ A +
Sbjct: 273 EVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLE 332
Query: 118 MI----SIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSL 173
SI +I+++ ++ ++G EAL +F +M + PN +
Sbjct: 333 RQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAA--PNLSTYNILIDMLCRA 390
Query: 174 LEPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAF----YQIESPDLVSW 229
+ + ++ K GL NV + + D K L A F Y++ +PD +++
Sbjct: 391 GKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITF 450
Query: 230 NAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVK 289
++I G ++A ++ +M+ +SI + SL+ + G +I+ ++
Sbjct: 451 CSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMIN 510
Query: 290 VGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKN---ANLVSWNAILSACLQHKQAGE 346
+ ++ L N+ + K ++FE I + S++ ++ ++ A E
Sbjct: 511 QNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANE 570
Query: 347 TFRLFKQM------------------------------LFSENK-----PNMITITNLLG 371
T+ LF M L E K P ++T +++
Sbjct: 571 TYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVID 630
Query: 372 TCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHA----QRVFDSTENP 427
A++ L+ + + + L+V + + LID + K G + A + + P
Sbjct: 631 GLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTP 690
Query: 428 NVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNLY 487
N+ +W+SL+ + +EAL F+ M+ L PN+VTY +++ + + + +
Sbjct: 691 NLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFW 750
Query: 488 NTMEEELGIPPAREHFSCMVDLLARAGCLYEAETF---IRKTGFDPDITTWKTLLSSCKT 544
M+++ G+ P+ ++ M+ LA+AG + EA + G PD + ++ +
Sbjct: 751 QEMQKQ-GMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGL-S 808
Query: 545 HGN--VDIAERAAENILKLDP-SNSAALVLLSSIHAS 578
+GN +D E + P N +VLL ++H +
Sbjct: 809 NGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKN 845
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 75/374 (20%), Positives = 150/374 (40%), Gaps = 40/374 (10%)
Query: 224 PDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQI 283
P ++ +I AF+ ++ +++F+QM +G P F +L+ ++ + +
Sbjct: 166 PAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSL 225
Query: 284 HSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNA---NLVSWNAILSACLQ 340
+ + ++ LYN + + K + A F I N + V++ +++ +
Sbjct: 226 LDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCK 285
Query: 341 HKQAGETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSV 400
+ E +F+ LE +V C + +++
Sbjct: 286 ANRLDEAVEMFEH-------------------------LEKNRRVPCTYAYNTMIMGYGS 320
Query: 401 SNGLIDMYAKCGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGV 460
+ + Y S++ QR S P+VI+++ ++ G EAL +F +M+
Sbjct: 321 AGKFDEAY----SLLERQRAKGSI--PSVIAYNCILTCLRKMGKVDEALKVFEEMKK-DA 373
Query: 461 RPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAE 520
PN TY ++ G ++ + L ++M++ G+ P + MVD L ++ L EA
Sbjct: 374 APNLSTYNILIDMLCRAGKLDTAFELRDSMQKA-GLFPNVRTVNIMVDRLCKSQKLDEAC 432
Query: 521 TFIRKTGFD---PDITTWKTLLSSCKTHGNVDIAERAAENILKLD-PSNSAALVLLSSIH 576
+ + PD T+ +L+ G VD A + E +L D +NS L
Sbjct: 433 AMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNF 492
Query: 577 ASAGNWEDVAKLRK 590
+ G ED K+ K
Sbjct: 493 FNHGRKEDGHKIYK 506
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/341 (21%), Positives = 132/341 (38%), Gaps = 48/341 (14%)
Query: 4 KCGSMKDARQVFDAMHLRNVV----SWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQL 59
K G + R +F+ + R V S++ +I G + G NE ++ M G D
Sbjct: 529 KAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTR 588
Query: 60 TFGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMI 119
+ +I C G + QL + GF +V +I ++ A +F
Sbjct: 589 AYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEA 648
Query: 120 SIK----DLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLE 175
K +++ +SS+I GF ++G EA + +++++G+ PN + S+ A E
Sbjct: 649 KSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGL-TPNLYTWNSLLDALVKAEE 707
Query: 176 -----------------PE---YGRQIHGICA---------------KFGLVRNVFSGCS 200
P YG I+G+C K G+ + S +
Sbjct: 708 INEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTT 767
Query: 201 LCDMYAKCGFLPSAKTAFYQIES----PDLVSWNAIIAAFADSGDANEAISIFRQMMHIG 256
+ AK G + A F + ++ PD +NA+I ++ A +A S+F + G
Sbjct: 768 MISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRG 827
Query: 257 LIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVA 297
L + T + LL L Q + + + + G + A
Sbjct: 828 LPIHNKTCVVLLDTLHKNDCLEQAAIVGAVLRETGKARHAA 868
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 114/527 (21%), Positives = 220/527 (41%), Gaps = 30/527 (5%)
Query: 66 KACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMIS----I 121
KA C D+ + +V GFG + L S+ + G + A F+ +
Sbjct: 172 KADCDVFDVLWSTR---NVCVPGFG----VFDALFSVLIDLGMLEEAIQCFSKMKRFRVF 224
Query: 122 KDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYGRQ 181
S + ++ F +LG + F+DM+ G +P F + + E R
Sbjct: 225 PKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGA-RPTVFTYNIMIDCMCKEGDVEAARG 283
Query: 182 IHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIES----PDLVSWNAIIAAFA 237
+ GLV + + S+ D + K G L F +++ PD++++NA+I F
Sbjct: 284 LFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFC 343
Query: 238 DSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVA 297
G + +R+M GL P+ +++ +L+ A + Q ++ + + +VG
Sbjct: 344 KFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEY 403
Query: 298 LYNSLLTMYTKCSNLHDALSV---FEAISKNANLVSWNAILSACLQHKQAGETFRLFKQM 354
Y SL+ K NL DA + + N+V++ A++ ++ E LF +M
Sbjct: 404 TYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKM 463
Query: 355 LFSENKPNMITITNLLGTCAELA----SLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAK 410
+ PN+ + L+ + +LE+ N++ +K L+L + GL +
Sbjct: 464 DTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKI 523
Query: 411 CGSVIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGV 470
+ + + + N + +++L+ Y SG E L+L +M+ L + VT+ +
Sbjct: 524 EAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVL 583
Query: 471 LSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIR---KTG 527
+ LV + + +N + + G+ F+ M+D L + + A T + G
Sbjct: 584 IDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKG 643
Query: 528 FDPDITTWKTLLSSCKTHGNV----DIAERAAENILKLDPSNSAALV 570
PD T + +L+ GNV + ++ AE +KLD +LV
Sbjct: 644 LVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLV 690
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 97/501 (19%), Positives = 215/501 (42%), Gaps = 52/501 (10%)
Query: 4 KCGSMKDARQVFDAMHLR----NVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQL 59
K G ++ AR +F+ M R + V++ SMI G+ + G+ ++ V + +M PD +
Sbjct: 274 KEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVI 333
Query: 60 TFGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMI 119
T+ ++I C G + +G + + + +G ++V
Sbjct: 334 TYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVV------------------------- 368
Query: 120 SIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYG 179
S+S+++ F + G +A+ + DM R G+ PNE+ S+ A +
Sbjct: 369 ------SYSTLVDAFCKEGMMQQAIKFYVDMRRVGLV-PNEYTYTSLIDANCKIGNLSDA 421
Query: 180 RQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIES----PDLVSWNAIIAA 235
++ + G+ NV + +L D + A+ F ++++ P+L S+NA+I
Sbjct: 422 FRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHG 481
Query: 236 FADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKE 295
F + + + A+ + ++ G+ PD + + + + S + + + + + G
Sbjct: 482 FVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKAN 541
Query: 296 VALYNSLLTMYTKCSNLHDALSVFEAISK---NANLVSWNAILSACLQHKQAGETFRLFK 352
+Y +L+ Y K N + L + + + + +V++ ++ ++K + F
Sbjct: 542 SLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFN 601
Query: 353 QMLFSEN---KPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYA 409
++ S + + N T ++ + +E + V+ GLV D + L+D
Sbjct: 602 RI--SNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNF 659
Query: 410 KCGSVIHAQRVFDSTE----NPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEV 465
K G+V+ A + D ++++++SL+ G + +A + +M G+ P+EV
Sbjct: 660 KQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEV 719
Query: 466 TYVGVLSACSHIGLVEEGWNL 486
+ VL +G ++E L
Sbjct: 720 LCISVLKKHYELGCIDEAVEL 740
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 113/544 (20%), Positives = 221/544 (40%), Gaps = 42/544 (7%)
Query: 6 GSMKDARQVFDAMHLRNVVSWTSMISG----YSQNGQGNEAVVMYIQMLRSGFFPDQLTF 61
G +++A Q F M V T +G +++ G+ ++ + M+ +G P T+
Sbjct: 206 GMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTY 265
Query: 62 GSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVF----- 116
+I C GD+ R L + G V N SM FG+V D
Sbjct: 266 NIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYN---SMIDGFGKVGRLDDTVCFFEE 322
Query: 117 --TMISIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLL 174
M D+I+++++I F + G L +R+M G+ +PN ++ A
Sbjct: 323 MKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGL-KPNVVSYSTLVDAFCKEG 381
Query: 175 EPEYGRQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSA---KTAFYQIESP-DLVSWN 230
+ + + + GLV N ++ SL D K G L A Q+ ++V++
Sbjct: 382 MMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYT 441
Query: 231 AIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKV 290
A+I D+ EA +F +M G+IP+ ++ +L+ +++ +++ + +
Sbjct: 442 ALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGR 501
Query: 291 GFNKEVALYNSLLTMYTKCSNLHDALSVFEAISK---NANLVSWNAILSACLQHKQAGET 347
G ++ LY + + + A V + + AN + + ++ A + E
Sbjct: 502 GIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEG 561
Query: 348 FRLFKQMLFSENKPNMITITNLL-GTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLID 406
L +M + + ++T L+ G C + + + S GL + ++ +ID
Sbjct: 562 LHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMID 621
Query: 407 MYAKCGSVIHAQRVFDSTEN----PNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRP 462
K V A +F+ P+ +++SL+ G G EAL L KM +G++
Sbjct: 622 GLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKL 681
Query: 463 NEVTYVGVLSACSHIGLVEEGWNLYNTM-------EEELGIPPAREHFSCMVDLLARAGC 515
+ + Y ++ SH +++ + M +E L I ++H+ GC
Sbjct: 682 DLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYE--------LGC 733
Query: 516 LYEA 519
+ EA
Sbjct: 734 IDEA 737
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 109/579 (18%), Positives = 257/579 (44%), Gaps = 66/579 (11%)
Query: 7 SMKDARQVFDAM----HLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLTFG 62
+ DA +F M +++ ++ ++S ++ + + + + QM G + T+
Sbjct: 61 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120
Query: 63 SIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHA----SDVFTM 118
+I C + L + ++K G+ ++V + L++ Y + +++ A +F
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 180
Query: 119 ISIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEY 178
+ ++++++I G EA+ L M+ +G QP+ Y
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGC-QPDLVT---------------Y 224
Query: 179 GRQIHGICAK------FGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAI 232
G ++G+C + F L+ + G ++E P ++ +N I
Sbjct: 225 GVVVNGLCKRGDTDLAFNLLNKMEQG---------------------KLE-PGVLIYNTI 262
Query: 233 IAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGF 292
I ++A+++F++M G+ P+ +T+ SL+ + + ++ S +++
Sbjct: 263 IDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKI 322
Query: 293 NKEVALYNSLLTMYTKCSNLHDALSVFEAISK---NANLVSWNAILSACLQHKQAGETFR 349
N +V +++L+ + K L +A +++ + K + ++V+++++++ H + E +
Sbjct: 323 NPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQ 382
Query: 350 LFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYA 409
+F+ M+ P+++T L+ + +E G +V + GLV + N LI
Sbjct: 383 MFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLF 442
Query: 410 KCGSVIHAQRVFDSTEN----PNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEV 465
+ G AQ +F + PN++++++L+ G +G +A+ +F ++ + P
Sbjct: 443 QAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIY 502
Query: 466 TYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRK 525
TY ++ G VE+GW+L+ + + G+ P ++ M+ R G EA+ ++
Sbjct: 503 TYNIMIEGMCKAGKVEDGWDLFCNLSLK-GVKPDVVAYNTMISGFCRKGSKEEADALFKE 561
Query: 526 TGFD---PDITTWKTLLSSCKTHGNVDIAERAAENILKL 561
D P+ + TL+ + G+ E +AE I ++
Sbjct: 562 MKEDGTLPNSGCYNTLIRARLRDGD---REASAELIKEM 597
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 91/380 (23%), Positives = 164/380 (43%), Gaps = 60/380 (15%)
Query: 191 LVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFR 250
L RN S L D A G + ++ P ++ ++ +++A A + IS+
Sbjct: 52 LSRNGLSELKLDDAVALFGEMVKSRPF------PSIIEFSKLLSAIAKMNKFDVVISLGE 105
Query: 251 QMMHIGLIPDSITFLSLL-CACTS---PMALNQGMQIHSYIVKVGFNKEVALYNSLLTMY 306
QM ++G+ + T+ L+ C C P+AL + ++K+G+ + +SLL Y
Sbjct: 106 QMQNLGIPHNHYTYSILINCFCRRSQLPLAL----AVLGKMMKLGYEPNIVTLSSLLNGY 161
Query: 307 TKCSNLHDALSVFEAI---SKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPNM 363
+ +A+++ + + N V++N ++ H +A E L +M+ +P++
Sbjct: 162 CHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDL 221
Query: 364 ITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVIHAQRVFDS 423
+T G+V+ NGL K G A + +
Sbjct: 222 VTY--------------------------GVVV-----NGL----CKRGDTDLAFNLLNK 246
Query: 424 TEN----PNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGL 479
E P V+ ++++I G +ALNLF++M G+RPN VTY ++S + G
Sbjct: 247 MEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGR 306
Query: 480 VEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETF---IRKTGFDPDITTWK 536
+ L + M E I P FS ++D + G L EAE + K DP I T+
Sbjct: 307 WSDASRLLSDMIER-KINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYS 365
Query: 537 TLLSSCKTHGNVDIAERAAE 556
+L++ H +D A++ E
Sbjct: 366 SLINGFCMHDRLDEAKQMFE 385
>AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14510482-14511891 FORWARD
LENGTH=469
Length = 469
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 126/254 (49%), Gaps = 17/254 (6%)
Query: 358 ENKPNMITITNLLGT---CAELASLEVGNQVH-CFSVKSGLVLDVSVSNGLIDMYAKCGS 413
E+K ++ LLG C E+ +LE VH C + LD + +I+MY+ C S
Sbjct: 104 EDKGYIVDFPRLLGLAKLCGEVEALEEARVVHDCITP-----LDARSYHTVIEMYSGCRS 158
Query: 414 VIHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSA 473
A VF+ N +W ++I A +G G A+++F + G +P++ + V A
Sbjct: 159 TDDALNVFNEMPKRNSETWGTMIRCLAKNGEGERAIDMFTRFIEEGNKPDKEIFKAVFFA 218
Query: 474 CSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRKTGFDPDIT 533
C IG + EG + +M + G+ + E + ++++LA G L EA F+ + +P +
Sbjct: 219 CVSIGDINEGLLHFESMYRDYGMVLSMEDYVNVIEMLAACGHLDEALDFVERMTVEPSVE 278
Query: 534 TWKTLLSSCKTHGNVDIAERAAENILKLDPS-----NSAALVLLSSIHASAGNWEDVAKL 588
W+TL++ C G +++ +R AE I KLD S ++A LV + AS E + +L
Sbjct: 279 MWETLMNLCWVQGYLELGDRFAELIKKLDASRMSKESNAGLV---AAKASDSAMEKLKEL 335
Query: 589 RKVLDDGYDPAQRL 602
R DP +R+
Sbjct: 336 RYCQMIRDDPKKRM 349
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 72/146 (49%), Gaps = 9/146 (6%)
Query: 1 MYGKCGSMKDARQVFDAMHLRNVVSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQLT 60
MY C S DA VF+ M RN +W +MI ++NG+G A+ M+ + + G PD+
Sbjct: 152 MYSGCRSTDDALNVFNEMPKRNSETWGTMIRCLAKNGEGERAIDMFTRFIEEGNKPDKEI 211
Query: 61 FGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQN--GLISMYTNFGQVAHASDVFTM 118
F ++ AC GDI G LH + +G L ++ +I M G + A D
Sbjct: 212 FKAVFFACVSIGDINEG-LLHFESMYRDYGMVLSMEDYVNVIEMLAACGHLDEALDFVER 270
Query: 119 ISIKDLIS-WSSM-----IRGFTQLG 138
++++ + W ++ ++G+ +LG
Sbjct: 271 MTVEPSVEMWETLMNLCWVQGYLELG 296
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 64/140 (45%), Gaps = 1/140 (0%)
Query: 200 SLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIP 259
++ +MY+ C A F ++ + +W +I A +G+ AI +F + + G P
Sbjct: 148 TVIEMYSGCRSTDDALNVFNEMPKRNSETWGTMIRCLAKNGEGERAIDMFTRFIEEGNKP 207
Query: 260 DSITFLSLLCACTSPMALNQG-MQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSV 318
D F ++ AC S +N+G + S G + Y +++ M C +L +AL
Sbjct: 208 DKEIFKAVFFACVSIGDINEGLLHFESMYRDYGMVLSMEDYVNVIEMLAACGHLDEALDF 267
Query: 319 FEAISKNANLVSWNAILSAC 338
E ++ ++ W +++ C
Sbjct: 268 VERMTVEPSVEMWETLMNLC 287
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 85/197 (43%), Gaps = 9/197 (4%)
Query: 243 NEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSL 302
EA+ + + G I D L L C AL + +H I + + Y+++
Sbjct: 94 REALEVIDILEDKGYIVDFPRLLGLAKLCGEVEALEEARVVHDCITPL----DARSYHTV 149
Query: 303 LTMYTKCSNLHDALSVFEAISKNANLVSWNAILSACLQHKQAGETFRLFKQMLFSENKPN 362
+ MY+ C + DAL+VF + K N +W ++ ++ + +F + + NKP+
Sbjct: 150 IEMYSGCRSTDDALNVFNEMPKR-NSETWGTMIRCLAKNGEGERAIDMFTRFIEEGNKPD 208
Query: 363 MITITNLLGTCAELASLEVGNQVHCFSV--KSGLVLDVSVSNGLIDMYAKCGSVIHAQRV 420
+ C + + G +H S+ G+VL + +I+M A CG + A
Sbjct: 209 KEIFKAVFFACVSIGDINEG-LLHFESMYRDYGMVLSMEDYVNVIEMLAACGHLDEALDF 267
Query: 421 FDS-TENPNVISWSSLI 436
+ T P+V W +L+
Sbjct: 268 VERMTVEPSVEMWETLM 284
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 105/501 (20%), Positives = 215/501 (42%), Gaps = 42/501 (8%)
Query: 33 YSQNGQGNEAVVMYIQMLRSGFFPDQLTFGSIIKACCIAGDIYLGRQLHAHVIKSGFGGH 92
Y++ + ++ + +M+R GF P ++K + + ++ +I+ G
Sbjct: 178 YTKKSMAEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPT 237
Query: 93 LVAQNGLISMYTNFGQVAHASDVFTMISIKDL----ISWSSMIRGFTQLGYEIEALYLFR 148
++ N ++ G + ++ + +++ ++++ +I GF++ G EA
Sbjct: 238 VITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHG 297
Query: 149 DMLRQGV----YQPNEFVLG----SVFSACSSLLEPEYGRQIHGICAKFGLVRNVFSGCS 200
DM R G Y N + G +F + + I+ + + N++ C+
Sbjct: 298 DMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTY----NIYI-CA 352
Query: 201 LCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPD 260
LCD G + A+ + +PD+VS+N ++ + G EA +F + + P
Sbjct: 353 LCDF----GRIDDARELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPS 408
Query: 261 SITFLSLLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFE 320
+T+ +L+ L ++ + +V Y +L+ + K NL A V++
Sbjct: 409 IVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYD 468
Query: 321 AISKNANLVSWNAILSACLQHKQAGET---FRLFKQMLFSENKPNMITITNLL--GTCAE 375
+ + A + + + G++ FRL ++M+ +++ +TI N+ G C
Sbjct: 469 EMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLC-- 526
Query: 376 LASLEVGNQVHCFSVKS-----GLVLDVSVSNGLIDMYAKCGSVIHAQRVFDSTEN---- 426
+VGN V + GLV D +I Y + G A+ ++D
Sbjct: 527 ----KVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLY 582
Query: 427 PNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACSHIGLVEEGWNL 486
P+VI++ LI G+A +G +A +M+ GVRPN +T+ +L G ++E +
Sbjct: 583 PSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRY 642
Query: 487 YNTMEEELGIPPAREHFSCMV 507
MEEE GIPP + ++ ++
Sbjct: 643 LCKMEEE-GIPPNKYSYTMLI 662
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 105/507 (20%), Positives = 205/507 (40%), Gaps = 71/507 (14%)
Query: 4 KCGSMKDARQVFDAMHLRNV----VSWTSMISGYSQNGQGNEAVVMYIQMLRSGFFPDQL 59
K G ++ +++ M RN+ V++ +I+G+S+NG+ EA + M RSGF
Sbjct: 250 KAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPY 309
Query: 60 TFGSIIKACCIAGDIYLGRQLHAHVIKSGFGGHLVAQNGLISMYTNFGQVAHASDVFTMI 119
+F +I+ C G + ++ +G N I +FG++ A ++ + +
Sbjct: 310 SFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSM 369
Query: 120 SIKDLISWSSMIRGFTQLGYEIEALYLFRDMLRQGVYQPNEFVLGSVFSACSSLLEPEYG 179
+ D++S+++++ G+ ++G +EA LF D LR G P S+ + Y
Sbjct: 370 AAPDVVSYNTLMHGYIKMGKFVEASLLFDD-LRAGDIHP------SIVT---------YN 413
Query: 180 RQIHGICAKFGLVRNVFSGCSLCDMYAKCGFLPSAKTAFYQIESPDLVSWNAIIAAFADS 239
I G+C L G + Q+ PD++++ ++ F +
Sbjct: 414 TLIDGLCESGNLE----------------GAQRLKEEMTTQLIFPDVITYTTLVKGFVKN 457
Query: 240 GDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYIVKVGFN-KEVAL 298
G+ + A ++ +M+ G+ PD + + ++ ++H +V + ++ +
Sbjct: 458 GNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTI 517
Query: 299 YNSLLTMYTKCSNLHDALSVFEAISKNA---NLVSWNAILSACLQHKQAGETFRLFKQML 355
YN + K NL A+ I + + V++ ++ L++ Q L+ +ML
Sbjct: 518 YNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEML 577
Query: 356 FSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGLIDMYAKCGSVI 415
P++IT L+ A+ LE Q K G+
Sbjct: 578 RKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGV--------------------- 616
Query: 416 HAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYVGVLSACS 475
PNV++ ++L+ G +G EA KM G+ PN+ +Y ++S
Sbjct: 617 ----------RPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNC 666
Query: 476 HIGLVEEGWNLYNTMEEELGIPPAREH 502
EE LY M ++ P H
Sbjct: 667 DFEKWEEVVKLYKEMLDKEIEPDGYTH 693
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 87/387 (22%), Positives = 171/387 (44%), Gaps = 24/387 (6%)
Query: 228 SWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLSLLCACTSPMALNQGMQIHSYI 287
S+N +I + G ++A + +M++ G+ P + T+ +CA ++ ++ S +
Sbjct: 310 SFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSM 369
Query: 288 VKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISK---NANLVSWNAILSACLQHKQA 344
+V YN+L+ Y K +A +F+ + + ++V++N ++ +
Sbjct: 370 AA----PDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNL 425
Query: 345 GETFRLFKQMLFSENKPNMITITNLLGTCAELASLEVGNQVHCFSVKSGLVLDVSVSNGL 404
RL ++M P++IT T L+ + +L + +V+ ++ G+ D
Sbjct: 426 EGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTR 485
Query: 405 IDMYAKCGSV-----IHAQRVFDSTENPNVISWSSLIVGYAMSGLGHEALNLFRKMRNLG 459
+ G +H + V P++ ++ I G G +A+ RK+ +G
Sbjct: 486 AVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVG 545
Query: 460 VRPNEVTYVGVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEA 519
+ P+ VTY V+ G + NLY+ M + P +F ++ A+AG L +A
Sbjct: 546 LVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYF-VLIYGHAKAGRLEQA 604
Query: 520 ---ETFIRKTGFDPDITTWKTLLSSCKTHGNVDIAERAAENILKLD----PSNSAALVLL 572
T ++K G P++ T LL GN+D A R + K++ P N + +L
Sbjct: 605 FQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRY---LCKMEEEGIPPNKYSYTML 661
Query: 573 SSIHASAGNWEDVAKL-RKVLDDGYDP 598
S + WE+V KL +++LD +P
Sbjct: 662 ISKNCDFEKWEEVVKLYKEMLDKEIEP 688
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 88/420 (20%), Positives = 169/420 (40%), Gaps = 56/420 (13%)
Query: 207 KCGFLPSAKTAFYQIESPDLVSWNAIIAAFADSGDANEAISIFRQMMHIGLIPDSITFLS 266
+ GFLPS + N ++ DS N+A +++ M+ G++P ITF +
Sbjct: 196 RKGFLPSVRNC------------NIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNT 243
Query: 267 LLCACTSPMALNQGMQIHSYIVKVGFNKEVALYNSLLTMYTKCSNLHDALSVFEAISKNA 326
+L +C L + +I + + YN L+ ++K + +A + ++
Sbjct: 244 MLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSG 303
Query: 327 NLV---SWNAILSACLQHKQAGETFRLFKQMLFSENKPNMITIT---------------- 367
V S+N ++ + + + + +ML + P T
Sbjct: 304 FAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDAR 363
Query: 368 NLLGTCAELASLEVGNQVHCF-----SVKSGLVLD----------VSVSNGLIDMYAKCG 412
LL + A + +H + V++ L+ D + N LID + G
Sbjct: 364 ELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESG 423
Query: 413 SVIHAQRVFDSTEN----PNVISWSSLIVGYAMSGLGHEALNLFRKMRNLGVRPNEVTYV 468
++ AQR+ + P+VI++++L+ G+ +G A ++ +M G++P+ Y
Sbjct: 424 NLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYT 483
Query: 469 GVLSACSHIGLVEEGWNLYNTMEEELGIPPAREHFSCMVDLLARAGCLYEAETFIRK--- 525
+G ++ + L+ M P ++ +D L + G L +A F RK
Sbjct: 484 TRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFR 543
Query: 526 TGFDPDITTWKTLLSSCKTHGNVDIAERAAENIL--KLDPSNSAALVLLSSIHASAGNWE 583
G PD T+ T++ +G +A + +L +L PS VL+ HA AG E
Sbjct: 544 VGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYG-HAKAGRLE 602