Miyakogusa Predicted Gene
- Lj1g3v4579080.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v4579080.1 tr|G7L1Q5|G7L1Q5_MEDTR DNA replication licensing
factor MCM6 OS=Medicago truncatula GN=MTR_7g100680
,79.79,0,MCM_2,Mini-chromosome maintenance, DNA-dependent ATPase;
Nucleic acid-binding proteins,Nucleic acid-,CUFF.32711.1
(792 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G09660.1 | Symbols: MCM8 | minichromosome maintenance 8 | chr... 1008 0.0
AT2G16440.1 | Symbols: MCM4 | Minichromosome maintenance (MCM2/3... 295 6e-80
AT5G44635.1 | Symbols: MCM6 | minichromosome maintenance (MCM2/3... 284 2e-76
AT5G46280.1 | Symbols: MCM3 | Minichromosome maintenance (MCM2/3... 277 2e-74
AT4G02060.2 | Symbols: PRL | Minichromosome maintenance (MCM2/3/... 275 6e-74
AT4G02060.1 | Symbols: PRL, MCM7 | Minichromosome maintenance (M... 275 6e-74
AT1G44900.1 | Symbols: MCM2, ATMCM2 | minichromosome maintenance... 273 4e-73
AT1G44900.2 | Symbols: MCM2 | minichromosome maintenance (MCM2/3... 273 4e-73
AT2G07690.1 | Symbols: MCM5 | Minichromosome maintenance (MCM2/3... 263 5e-70
AT2G07690.2 | Symbols: MCM5 | Minichromosome maintenance (MCM2/3... 258 1e-68
AT2G14050.1 | Symbols: MCM9 | minichromosome maintenance 9 | chr... 231 2e-60
>AT3G09660.1 | Symbols: MCM8 | minichromosome maintenance 8 |
chr3:2961314-2966166 REVERSE LENGTH=777
Length = 777
Score = 1008 bits (2605), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 500/758 (65%), Positives = 591/758 (77%), Gaps = 39/758 (5%)
Query: 40 FTVEETWLNLAADLHSFFSSPTGQNIASQVKNDFG-NYVLSLDFQQFKAMCHVEEFYEML 98
++E L L A+L FS+ G++I SQV D G ++ LSLD QQFK + +E F+ L
Sbjct: 38 LAIDEDKLQLTAELIRVFSASPGRDIVSQVNEDGGGSFSLSLDLQQFKKISDIENFFINL 97
Query: 99 MEKPKIALSCMGAAVHQVLLSNWENDKQELDGKVDIRLHNCPETMIALKNLKAAYIDKLV 158
+ PK + CM AAVH+VL WE ++ E K+++RLHN PE+ I+LKNL+AAYI KLV
Sbjct: 98 EDNPKGVIPCMNAAVHKVLFDQWETNEFENVMKINVRLHNYPESSISLKNLRAAYIGKLV 157
Query: 159 SVRGTAVKVSTVRPLVVEMSFECSKCKQVVTRIFPDGKFSPPSTCNLNGCKSKNFNPLRS 218
+V GT VKVSTV+PLV +M+F+C KCK +TR F DGKFSPP C+ +GCKSK F P+RS
Sbjct: 158 TVHGTVVKVSTVKPLVTQMAFDCGKCKTGITREFTDGKFSPPLKCDSHGCKSKTFTPIRS 217
Query: 219 TAKTIDFQKIRVQELLKHEDHEEGRVPRTVECELTQDLVDSCIPGDVVTVTGIIRGISTY 278
+A+TIDFQKIRVQEL K EDHEEGRVPRTVECEL +DLVD CIPGDVVTVTGII I+ Y
Sbjct: 218 SAQTIDFQKIRVQELQKPEDHEEGRVPRTVECELMEDLVDICIPGDVVTVTGIIGVINNY 277
Query: 279 MDIGGGKSKNKNQGFYYLYLEAISIKNSKSQSIPEDAQDSNPKARPTELFDLFSFSSKDL 338
MDIGGGKSK KNQGFYYL++EA+S+KN+K QS E+++DS+ A+ ++ DL+SFS +DL
Sbjct: 278 MDIGGGKSKTKNQGFYYLFIEAVSVKNTKRQSAFENSEDSSSSAQTADVGDLYSFSQRDL 337
Query: 339 EFVVKFADEHGSDLFRQILQSICPSIYGHELVKAGITLALFGGVRKNSMDQNKVPVRGDI 398
EF+VKF +E+GSD FR+IL S+CPSIYGHE+VKAGITL+LFGGVRK+SMD+NKVPVRGDI
Sbjct: 338 EFIVKFKEEYGSDTFRRILHSVCPSIYGHEIVKAGITLSLFGGVRKHSMDRNKVPVRGDI 397
Query: 399 HVIVVGDPGLGKSQLLQAAAAVSPRGIYVCGNATTKAGLTVAVVKDAMTNDYAFEAGAMV 458
HVI+VGDPGLGKSQLLQAAAA+SPRGIYVCGNATT+AGLTVAVVKD+MTNDYAFEAGAMV
Sbjct: 398 HVIIVGDPGLGKSQLLQAAAAISPRGIYVCGNATTRAGLTVAVVKDSMTNDYAFEAGAMV 457
Query: 459 LADSGLCCIDEFDKMSAEHQALLEAMEQQCVSIAKAGLVASLSSRTSVLAAANPVGGHYN 518
LAD GLCCIDEFDKM+ EHQALLEAMEQQCVS+AKAGLVASLS+RTSV+AAANPVGGHYN
Sbjct: 458 LADGGLCCIDEFDKMTTEHQALLEAMEQQCVSVAKAGLVASLSARTSVIAAANPVGGHYN 517
Query: 519 RAKTVNENLKMSAALLSRFDLIFILLDKPDELLDKRLSEHIMSLHSGHGQHSPALKKRRG 578
RAKTVNENLKMSAALLSRFDL+FILLDKPDELLDK++SEHIMS H G + K
Sbjct: 518 RAKTVNENLKMSAALLSRFDLVFILLDKPDELLDKQVSEHIMSHHRMLGMQTCMQK---- 573
Query: 579 DQPSDSRAAVSQNAEGVDFSVRPGSLISKLKLDPRRDRDFVPLPGQLLRKYIAYARSFVF 638
G+ + G + K+ +++A +F
Sbjct: 574 ---------------GILYFQDCGWTLRKMT---------------TFLRFLANCLGNIF 603
Query: 639 PR----MTKPAADILQKFYLKLRDHNTSADGTPITARQXXXXXXXXXXXXXXXXXXXITV 694
P M+K A +I+QKFYLKLRDHNTSAD TPITARQ ITV
Sbjct: 604 PMHGILMSKDAGEIIQKFYLKLRDHNTSADSTPITARQLESLVRLAQARARVDLREEITV 663
Query: 695 QDAMDVVEIMKESLYDKYVDENGVVDFGRSGGMSQQKEAKRFLNALNKQSELEQKDCFSV 754
QDAMDVVEIMKESLYDK +DE+GVVDFGRSGGMSQQKEAKRFL+AL+KQSEL+QKDCFSV
Sbjct: 664 QDAMDVVEIMKESLYDKLIDEHGVVDFGRSGGMSQQKEAKRFLSALDKQSELQQKDCFSV 723
Query: 755 SEIYSLADRISLKVPDIDTFIDNLNSVGFLLKKGPKTY 792
SE+YSLADRI L+VPDIDTF++NLN G+LLKKGPKTY
Sbjct: 724 SEMYSLADRIGLRVPDIDTFLENLNIAGYLLKKGPKTY 761
>AT2G16440.1 | Symbols: MCM4 | Minichromosome maintenance (MCM2/3/5)
family protein | chr2:7126536-7130665 REVERSE LENGTH=847
Length = 847
Score = 295 bits (756), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 200/585 (34%), Positives = 303/585 (51%), Gaps = 73/585 (12%)
Query: 80 LDFQQFKAMCHVEEFYEMLMEKPKIALSCMGAAVHQVLLSNWENDKQELDGKVDIRLHNC 139
+D F + + Y ++ P L+ VL+ + + V +R+ N
Sbjct: 175 IDVDAFDVFDYDPDLYNKMVRYPLEVLAIFDI----VLMDIVSTINRLFEKHVQVRIFNL 230
Query: 140 PETMIALKNLKAAYIDKLVSVRGTAVKVSTVRPLVVEMSFECSKCKQVVTRIFPD-GKFS 198
T +++NL + I+K++S++G ++ S++ P + E F C C I D GK S
Sbjct: 231 -RTSTSMRNLNPSDIEKMISLKGMIIRSSSIIPEIREAVFRCLVCGYFSDPIIVDRGKIS 289
Query: 199 PPSTCNLNGCKSKNFNPL-RSTAKTIDFQKIRVQELLKHEDHEEGRVPRTVECELTQDLV 257
P TC C +KN L + + D Q +R+QE ++ EG P TV L LV
Sbjct: 290 EPPTCLKQECMTKNSMTLVHNRCRFADKQIVRLQE--TPDEIPEGGTPHTVSLLLHDKLV 347
Query: 258 DSCIPGDVVTVTGIIRGISTYMDIGGGKSKNKNQGFYYLYLEAISIKN-SKSQSIPEDAQ 316
D+ PGD + VTGI R M + G + + + Y++ + IK SK + ED
Sbjct: 348 DNGKPGDRIEVTGIYRA----MTVRVGPAHRTVKSVFKTYIDCLHIKKASKLRMSAEDPM 403
Query: 317 D-SNPKARPTELFDLFSFSSKDLEFVVKFAD-EHGSDLFRQILQSICPSIYGHELVKAGI 374
D N R E +L D E + KF + D++ ++ +S+ P+I+ + VK G+
Sbjct: 404 DVDNSLRRVDEDVEL------DEEKLRKFQELSKQPDIYERLSRSLAPNIWELDDVKKGL 457
Query: 375 TLALFGGVRKNSMD-QNKVPVRGDIHVIVVGDPGLGKSQLLQAAAAVSPRGIYVCGNATT 433
LFGG N+++ + RGDI++++VGDPG KSQLLQ +SPRGIY G ++
Sbjct: 458 LCQLFGG---NALNLASGANFRGDINILLVGDPGTSKSQLLQYIHKLSPRGIYTSGRGSS 514
Query: 434 KAGLTVAVVKDAMTNDYAFEAGAMVLADSGLCCIDEFDKMSAEHQALL-EAMEQQCVSIA 492
GLT V KD T + E+GA+VL+D G+CCIDEFDKMS +++L E MEQQ VSIA
Sbjct: 515 AVGLTAYVAKDPETGETVLESGALVLSDRGICCIDEFDKMSDSARSMLHEVMEQQTVSIA 574
Query: 493 KAGLVASLSSRTSVLAAANPVGGHYNRAKTVNENLKMSAALLSRFDLIFILLDKPDELLD 552
KAG++ASL++RTSVLA ANP G YN +V EN+ + LLSRFDLI+++LDKPDE D
Sbjct: 575 KAGIIASLNARTSVLACANPSGSRYNPRLSVIENIHLPPTLLSRFDLIYLILDKPDEQTD 634
Query: 553 KRLSEHIMSLHSGHGQHSPALKKRRGDQPSDSRAAVSQNAEGVDFSVRPGSLISKLKLDP 612
+RL++HI++LH + + S E +D +
Sbjct: 635 RRLAKHIVALHFENAE--------------------SAQEEAIDITT------------- 661
Query: 613 RRDRDFVPLPGQLLRKYIAYARSFVFPRMTKPAADILQKFYLKLR 657
L Y++YAR + P+++ AA+ L + Y++LR
Sbjct: 662 -------------LTTYVSYARKNIHPKLSDEAAEELTRGYVELR 693
>AT5G44635.1 | Symbols: MCM6 | minichromosome maintenance (MCM2/3/5)
family protein | chr5:18006431-18010542 REVERSE
LENGTH=831
Length = 831
Score = 284 bits (726), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 179/564 (31%), Positives = 303/564 (53%), Gaps = 80/564 (14%)
Query: 132 VDIRLHNCPETMIALKNLKAAYIDKLVSVRGTAVKVSTVRPLVVEMSFECSKCKQVVTRI 191
+++ +N P T L+ L A I KLVSV G + S VRP ++ +F+C C V+ +
Sbjct: 107 INVSFYNLPFTK-RLRELTTAEIGKLVSVTGVVTRTSEVRPELLYGTFKCLDCGSVIKNV 165
Query: 192 FPDGKFSPPSTCNLNGCKSK-NFNPLRSTAKTIDFQKIRVQELLKHEDHEEGRVPRTVEC 250
K++ P+ C C ++ + LR +K D+Q++R+QE K + G +PR+++
Sbjct: 166 EQQFKYTQPTICVSPTCLNRARWALLRQESKFADWQRVRMQETSK--EIPAGSLPRSLDV 223
Query: 251 ELTQDLVDSCIPGDVVTVTG---IIRGISTYMDIG--------GGKSKNKNQGFYYLY-L 298
L ++V+ GD V TG +I IS G + K+ G + L
Sbjct: 224 ILRHEIVEQARAGDTVIFTGTVVVIPDISALAAPGERAECRRDSSQQKSSTAGHEGVQGL 283
Query: 299 EAISIKN--------SKSQSIPEDAQDSNPKARPTELF--DLFSFSSKDLEFVVKFADEH 348
+A+ +++ + S I + +++++ + R + D F++++L+ + + +
Sbjct: 284 KALGVRDLSYRLAFIANSVQIADGSRNTDMRNRQNDSNEDDQQQFTAEELDEIQQM--RN 341
Query: 349 GSDLFRQILQSICPSIYGHELVKAGITLALFGGVRKNSMDQNKVPVRGDIHVIVVGDPGL 408
D F +++ S+ P+++GH+ +K + L L GGV K + + +RGDI+V +VGDP
Sbjct: 342 TPDYFNKLVGSMAPTVFGHQDIKRAVLLMLLGGVHKTT--HEGINLRGDINVCIVGDPSC 399
Query: 409 GKSQLLQAAAAVSPRGIYVCGNATTKAGLTVAVVKDAMTNDYAFEAGAMVLADSGLCCID 468
KSQ L+ A + PR +Y G +++ AGLT V K+ T ++ EAGA++LAD+G+CCID
Sbjct: 400 AKSQFLKYTAGIVPRSVYTSGKSSSAAGLTATVAKEPETGEFCIEAGALMLADNGICCID 459
Query: 469 EFDKMSAEHQ-ALLEAMEQQCVSIAKAGLVASLSSRTSVLAAANPVGGHYNRAKTVNENL 527
EFDKM + Q A+ EAMEQQ +SI KAG+ A+L++RTS+LAAANPVGG Y+++K + N+
Sbjct: 460 EFDKMDIKDQVAIHEAMEQQTISITKAGIQATLNARTSILAAANPVGGRYDKSKPLKYNV 519
Query: 528 KMSAALLSRFDLIFILLDKPDELLDKRLSEHIMSLHSGHGQHSPALKKRRGDQPSDSRAA 587
+ A+LSRFDL+++++D PDE+ D ++ HI+ +H H AA
Sbjct: 520 NLPPAILSRFDLVYVMIDDPDEVTDYHIAHHIVRVHQKH------------------EAA 561
Query: 588 VSQNAEGVDFSVRPGSLISKLKLDPRRDRDFVPLPGQLLRKYIAYARSFVFPRMTKPAAD 647
+S V L++YIAYA++ P+++ A
Sbjct: 562 LSPEFTTVQ-----------------------------LKRYIAYAKTLK-PKLSPEARK 591
Query: 648 ILQKFYLKLRDHNTSADGTPITAR 671
+L + Y+ LR +T+ GT + R
Sbjct: 592 LLVESYVALRRGDTTP-GTRVAYR 614
>AT5G46280.1 | Symbols: MCM3 | Minichromosome maintenance (MCM2/3/5)
family protein | chr5:18769902-18773606 REVERSE
LENGTH=776
Length = 776
Score = 277 bits (709), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 198/585 (33%), Positives = 301/585 (51%), Gaps = 56/585 (9%)
Query: 143 MIALKNLKAAYIDKLVSVRGTAVKVSTVRPLVVEMSFECSKCKQVVTRIFPD-GKFSPPS 201
++ + L + +I +V V G K S VRP VV+ C + R + D +
Sbjct: 101 VVTPRELLSDFIGSMVCVEGIVTKCSLVRPKVVKSVHFCPSTGEFTNRDYRDITSHAGLP 160
Query: 202 TCNLNGCKSKNFNPLRST---AKTIDFQKIRVQELLKHEDHEEGRVPRTVECELTQDLVD 258
T ++ + N L + K D Q + +QE+ E+ G++PR+V+ DLVD
Sbjct: 161 TGSVYPTRDDKGNLLVTEYGLCKYKDHQTLSIQEV--PENAAPGQLPRSVDVIAEDDLVD 218
Query: 259 SCIPGDVVTVTGIIRGISTYMDIGGGKSKNKNQGFYYLYLEA--ISIKNSKSQSIPEDAQ 316
SC PGD V+V GI + + GKSK G + L A I++ N ++ +
Sbjct: 219 SCKPGDRVSVFGIYKALP-------GKSKGSVNGVFRTILIANNIALLNKEANA------ 265
Query: 317 DSNPKARPTELFDLFSFSSKDLEFVVKFADEHGSDLFRQILQSICPSIYGHELVKAGITL 376
P ++ +DL+ + A D F + +S+ PSIYGH +K + L
Sbjct: 266 -------PI-------YTKQDLDNIKNIARR--DDAFDLLARSLAPSIYGHAWIKKAVVL 309
Query: 377 ALFGGVRKNSMDQNKVPVRGDIHVIVVGDPGLGKSQLLQAAAAVSPRGIYVCGNATTKAG 436
+ GGV KN +N +RGDI++++VGDP + KSQLL+A ++P I G ++ G
Sbjct: 310 LMLGGVEKNL--KNGTHLRGDINMMMVGDPSVAKSQLLRAIMNIAPLAISTTGRGSSGVG 367
Query: 437 LTVAVVKDAMTNDYAFEAGAMVLADSGLCCIDEFDKMSAEHQ-ALLEAMEQQCVSIAKAG 495
LT AV D T + EAGAMVLAD G+ CIDEFDKM+ + + A+ E MEQQ V+IAKAG
Sbjct: 368 LTAAVTSDQETGERRLEAGAMVLADKGIVCIDEFDKMNDQDRVAIHEVMEQQTVTIAKAG 427
Query: 496 LVASLSSRTSVLAAANPVGGHYNRAKTVNENLKMSAALLSRFDLIFILLDKPDELLDKRL 555
+ ASL++R SV+AAANP+ G Y+R+ T +N+ + +LLSRFDL+FI+LD+ D +D +
Sbjct: 428 IHASLNARCSVVAAANPIYGTYDRSLTPTKNIGLPDSLLSRFDLLFIVLDQMDAGIDSMI 487
Query: 556 SEHIMSLHSGHGQHSPALKKRRGDQPSDSRA--AVSQNAEGVDFSVRPGSLISKLKLDPR 613
SEH++ +H K RG+ D A NAE F +L K K
Sbjct: 488 SEHVLRMHR--------YKNDRGEAGPDGSLPYAREDNAESEMFVKYNQTLHGKKKRGQT 539
Query: 614 RDRDFVPLPGQLLRKYIAYARSFVFPRMTKPAADILQKFYLKLRD--HNTSADGT-PITA 670
D+ L + L+KYI YA+ + P++T A++ + + Y LR+ +T GT PITA
Sbjct: 540 HDK---TLTIKFLKKYIHYAKHRITPKLTDEASERIAEAYADLRNAGSDTKTGGTLPITA 596
Query: 671 RQXXXXXXXXXXXXXXXXXXXITVQDAMDVVEIMKESLYDKYVDE 715
R +T DA +++M ++Y + + E
Sbjct: 597 RTLETIIRLATAHAKMKLSSEVTKADAEAALKLMNFAIYHQELTE 641
>AT4G02060.2 | Symbols: PRL | Minichromosome maintenance (MCM2/3/5)
family protein | chr4:901484-905297 FORWARD LENGTH=716
Length = 716
Score = 275 bits (704), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 160/437 (36%), Positives = 249/437 (56%), Gaps = 44/437 (10%)
Query: 146 LKNLKAAYIDKLVSVRGTAVKVSTVRPLVVEMSFECSKC-----KQVVTRIFPDGKFSPP 200
++ +KA++I +LV + G + S V+PL+ + C C ++V +R+F P
Sbjct: 143 IREVKASHIGQLVRISGIVTRCSDVKPLMAVAVYTCEDCGHEIYQEVTSRVFMPLFKCPS 202
Query: 201 STCNLNGCKSKNFNPLRS--TAKTIDFQKIRVQELLKHEDHEEGRVPRTVECELTQDLVD 258
S C LN SK NP+ +K + FQ+ ++QEL +H +G +PR++ L +L
Sbjct: 203 SRCRLN---SKAGNPILQLRASKFLKFQEAKMQELAEHV--PKGHIPRSMTVHLRGELTR 257
Query: 259 SCIPGDVVTVTGIIRGISTYMDIGGGKSKNKNQGFYY-LYLEAISIKNSKSQSIPEDAQD 317
PGDVV +GI ++ I K G YLEA S+ + K +
Sbjct: 258 KVSPGDVVEFSGI------FLPIPYTGFKALRAGLVADTYLEATSVTHFKKK-------- 303
Query: 318 SNPKARPTELFDLFSFSSKDLEFVVKFADEHGSDLFRQILQSICPSIYGHELVKAGITLA 377
++ + F + E + + A++ D++ ++ +S+ P IYGHE +K + L
Sbjct: 304 ----------YEEYEFQKDEEEQIARLAED--GDIYNKLSRSLAPEIYGHEDIKKALLLL 351
Query: 378 LFGGVRKNSMDQNKVPVRGDIHVIVVGDPGLGKSQLLQAAAAVSPRGIYVCGNATTKAGL 437
L G + D K+ RGD+H+ ++GDPG+ KSQLL+ V+PRG+Y G ++ GL
Sbjct: 352 LVGAPHRQLKDGMKI--RGDVHICLMGDPGVAKSQLLKHIINVAPRGVYTTGKGSSGVGL 409
Query: 438 TVAVVKDAMTNDYAFEAGAMVLADSGLCCIDEFDKM-SAEHQALLEAMEQQCVSIAKAGL 496
T AV++D +TN+ E GA+VLAD G+C IDEFDKM ++ A+ E MEQQ VSIAKAG+
Sbjct: 410 TAAVMRDQVTNEMVLEGGALVLADMGICAIDEFDKMDESDRTAIHEVMEQQTVSIAKAGI 469
Query: 497 VASLSSRTSVLAAANPVGGHYNRAKTVNENLKMSAALLSRFDLIFILLDKPDELLDKRLS 556
SL++RT+VLAAANP G Y+ +T EN+ + ALLSRFDL++++LD+ D D L+
Sbjct: 470 TTSLNARTAVLAAANPAWGRYDLRRTPAENINLPPALLSRFDLLWLILDRADMDSDLELA 529
Query: 557 EHIMSLHSGHGQHSPAL 573
+H++ +H + SPAL
Sbjct: 530 KHVLHVH--QTEESPAL 544
>AT4G02060.1 | Symbols: PRL, MCM7 | Minichromosome maintenance
(MCM2/3/5) family protein | chr4:901484-905297 FORWARD
LENGTH=716
Length = 716
Score = 275 bits (704), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 160/437 (36%), Positives = 249/437 (56%), Gaps = 44/437 (10%)
Query: 146 LKNLKAAYIDKLVSVRGTAVKVSTVRPLVVEMSFECSKC-----KQVVTRIFPDGKFSPP 200
++ +KA++I +LV + G + S V+PL+ + C C ++V +R+F P
Sbjct: 143 IREVKASHIGQLVRISGIVTRCSDVKPLMAVAVYTCEDCGHEIYQEVTSRVFMPLFKCPS 202
Query: 201 STCNLNGCKSKNFNPLRS--TAKTIDFQKIRVQELLKHEDHEEGRVPRTVECELTQDLVD 258
S C LN SK NP+ +K + FQ+ ++QEL +H +G +PR++ L +L
Sbjct: 203 SRCRLN---SKAGNPILQLRASKFLKFQEAKMQELAEHV--PKGHIPRSMTVHLRGELTR 257
Query: 259 SCIPGDVVTVTGIIRGISTYMDIGGGKSKNKNQGFYY-LYLEAISIKNSKSQSIPEDAQD 317
PGDVV +GI ++ I K G YLEA S+ + K +
Sbjct: 258 KVSPGDVVEFSGI------FLPIPYTGFKALRAGLVADTYLEATSVTHFKKK-------- 303
Query: 318 SNPKARPTELFDLFSFSSKDLEFVVKFADEHGSDLFRQILQSICPSIYGHELVKAGITLA 377
++ + F + E + + A++ D++ ++ +S+ P IYGHE +K + L
Sbjct: 304 ----------YEEYEFQKDEEEQIARLAED--GDIYNKLSRSLAPEIYGHEDIKKALLLL 351
Query: 378 LFGGVRKNSMDQNKVPVRGDIHVIVVGDPGLGKSQLLQAAAAVSPRGIYVCGNATTKAGL 437
L G + D K+ RGD+H+ ++GDPG+ KSQLL+ V+PRG+Y G ++ GL
Sbjct: 352 LVGAPHRQLKDGMKI--RGDVHICLMGDPGVAKSQLLKHIINVAPRGVYTTGKGSSGVGL 409
Query: 438 TVAVVKDAMTNDYAFEAGAMVLADSGLCCIDEFDKM-SAEHQALLEAMEQQCVSIAKAGL 496
T AV++D +TN+ E GA+VLAD G+C IDEFDKM ++ A+ E MEQQ VSIAKAG+
Sbjct: 410 TAAVMRDQVTNEMVLEGGALVLADMGICAIDEFDKMDESDRTAIHEVMEQQTVSIAKAGI 469
Query: 497 VASLSSRTSVLAAANPVGGHYNRAKTVNENLKMSAALLSRFDLIFILLDKPDELLDKRLS 556
SL++RT+VLAAANP G Y+ +T EN+ + ALLSRFDL++++LD+ D D L+
Sbjct: 470 TTSLNARTAVLAAANPAWGRYDLRRTPAENINLPPALLSRFDLLWLILDRADMDSDLELA 529
Query: 557 EHIMSLHSGHGQHSPAL 573
+H++ +H + SPAL
Sbjct: 530 KHVLHVH--QTEESPAL 544
>AT1G44900.1 | Symbols: MCM2, ATMCM2 | minichromosome maintenance
(MCM2/3/5) family protein | chr1:16970291-16974457
FORWARD LENGTH=936
Length = 936
Score = 273 bits (698), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 187/602 (31%), Positives = 312/602 (51%), Gaps = 73/602 (12%)
Query: 78 LSLDFQQFKAMCHVEEFYEM-LMEKPKIALSCMGAAVHQVLLSNWENDKQELDGKVDIRL 136
L +D+++F HV + L + P+ L M +V+ N K + K+ +R+
Sbjct: 256 LEIDYKEF---IHVHPNIAIWLADAPQPVLEVMEEVSEKVIFDLHPNYKN-IHTKIYVRV 311
Query: 137 HNCPETMIALKNLKAAYIDKLVSVRGTAVKVSTVRPLVVEMSFECSKCKQVVTRIFPDGK 196
N P ++N++ +++ ++ + G + S V P + ++ ++C+KC V+ F +
Sbjct: 312 TNLP-VNDQIRNIRQIHLNTMIRIGGVVTRRSGVFPQLQQVKYDCNKCGAVLGPFFQNS- 369
Query: 197 FSPPSTCNLNGCKSKNFNPLR-STAKTI--DFQKIRVQELLKHEDHEEGRVPRTVECELT 253
+S + + C+SK P + +TI ++QK+ +QE GR+PR E L
Sbjct: 370 YSEVKVGSCSECQSKG--PFTVNVEQTIYRNYQKLTIQE--SPGTVPAGRLPRHKEVILL 425
Query: 254 QDLVDSCIPGDVVTVTGIIRGISTYMDIGGGKSKNKNQGF--YYLYLEAISIKNSKSQSI 311
DL+D PG+ + VTGI + D+ S N GF + +EA
Sbjct: 426 NDLIDCARPGEEIEVTGIY---TNNFDL----SLNTKNGFPVFATVVEA----------- 467
Query: 312 PEDAQDSNPKARPTELFDLFSFSSKDLEFVVKFADEHGSDLFRQILQSICPSIYGHELVK 371
N + +LF + + +D + + + + + +I++SI PSIYGHE +K
Sbjct: 468 -------NYVTKKQDLFSAYKLTQEDKTQIEELSKD--PRIVERIIKSIAPSIYGHEDIK 518
Query: 372 AGITLALFGGVRKNSMDQNKVPVRGDIHVIVVGDPGLGKSQLLQAAAAVSPRGIYVCGNA 431
+ LA+FGG KN ++++ RGDI+V+++GDPG KSQ L+ R +Y G
Sbjct: 519 TALALAMFGGQEKNIKGKHRL--RGDINVLLLGDPGTAKSQFLKYVEKTGQRAVYTTGKG 576
Query: 432 TTKAGLTVAVVKDAMTNDYAFEAGAMVLADSGLCCIDEFDKMSAEHQ-ALLEAMEQQCVS 490
+ GLT AV KD +T ++ E GA+VLAD G+C IDEFDKM+ + + ++ EAMEQQ +S
Sbjct: 577 ASAVGLTAAVHKDPVTREWTLEGGALVLADRGICLIDEFDKMNDQDRVSIHEAMEQQSIS 636
Query: 491 IAKAGLVASLSSRTSVLAAANPVGGHYNRAKTVNENLKMSAALLSRFDLIFILLDKPDEL 550
I+KAG+V SL +R SV+AAANPVGG Y+ +K+ +N++++ +LSRFD++ ++ D D +
Sbjct: 637 ISKAGIVTSLQARCSVIAAANPVGGRYDSSKSFAQNVELTDPILSRFDILCVVKDVVDPV 696
Query: 551 LDKRLSEHIMSLHSGHGQHSPALKKRRGDQPSDSRAAVSQNAEGVDFSVRPGSLISKLKL 610
D+ L+E +++ H QP + S +G+ S GS
Sbjct: 697 TDEMLAEFVVNSHF-------------KSQPKGGKMEDSDPEDGIQGS--SGS------T 735
Query: 611 DPRRDRDFVPLPGQLLRKYIAYARSFVFPRMTKPAADILQKFYLKLRDHNTSADGTPITA 670
DP LP LL+KY+ Y++ +VFP++ + A L+ Y LR + + G I
Sbjct: 736 DPE------VLPQNLLKKYLTYSKLYVFPKLGELDAKKLETVYANLRRESMNGQGVSIAT 789
Query: 671 RQ 672
R
Sbjct: 790 RH 791
>AT1G44900.2 | Symbols: MCM2 | minichromosome maintenance (MCM2/3/5)
family protein | chr1:16970291-16974457 FORWARD
LENGTH=934
Length = 934
Score = 273 bits (697), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 187/602 (31%), Positives = 312/602 (51%), Gaps = 73/602 (12%)
Query: 78 LSLDFQQFKAMCHVEEFYEM-LMEKPKIALSCMGAAVHQVLLSNWENDKQELDGKVDIRL 136
L +D+++F HV + L + P+ L M +V+ N K + K+ +R+
Sbjct: 254 LEIDYKEF---IHVHPNIAIWLADAPQPVLEVMEEVSEKVIFDLHPNYKN-IHTKIYVRV 309
Query: 137 HNCPETMIALKNLKAAYIDKLVSVRGTAVKVSTVRPLVVEMSFECSKCKQVVTRIFPDGK 196
N P ++N++ +++ ++ + G + S V P + ++ ++C+KC V+ F +
Sbjct: 310 TNLP-VNDQIRNIRQIHLNTMIRIGGVVTRRSGVFPQLQQVKYDCNKCGAVLGPFFQNS- 367
Query: 197 FSPPSTCNLNGCKSKNFNPLR-STAKTI--DFQKIRVQELLKHEDHEEGRVPRTVECELT 253
+S + + C+SK P + +TI ++QK+ +QE GR+PR E L
Sbjct: 368 YSEVKVGSCSECQSKG--PFTVNVEQTIYRNYQKLTIQE--SPGTVPAGRLPRHKEVILL 423
Query: 254 QDLVDSCIPGDVVTVTGIIRGISTYMDIGGGKSKNKNQGF--YYLYLEAISIKNSKSQSI 311
DL+D PG+ + VTGI + D+ S N GF + +EA
Sbjct: 424 NDLIDCARPGEEIEVTGIY---TNNFDL----SLNTKNGFPVFATVVEA----------- 465
Query: 312 PEDAQDSNPKARPTELFDLFSFSSKDLEFVVKFADEHGSDLFRQILQSICPSIYGHELVK 371
N + +LF + + +D + + + + + +I++SI PSIYGHE +K
Sbjct: 466 -------NYVTKKQDLFSAYKLTQEDKTQIEELSKD--PRIVERIIKSIAPSIYGHEDIK 516
Query: 372 AGITLALFGGVRKNSMDQNKVPVRGDIHVIVVGDPGLGKSQLLQAAAAVSPRGIYVCGNA 431
+ LA+FGG KN ++++ RGDI+V+++GDPG KSQ L+ R +Y G
Sbjct: 517 TALALAMFGGQEKNIKGKHRL--RGDINVLLLGDPGTAKSQFLKYVEKTGQRAVYTTGKG 574
Query: 432 TTKAGLTVAVVKDAMTNDYAFEAGAMVLADSGLCCIDEFDKMSAEHQ-ALLEAMEQQCVS 490
+ GLT AV KD +T ++ E GA+VLAD G+C IDEFDKM+ + + ++ EAMEQQ +S
Sbjct: 575 ASAVGLTAAVHKDPVTREWTLEGGALVLADRGICLIDEFDKMNDQDRVSIHEAMEQQSIS 634
Query: 491 IAKAGLVASLSSRTSVLAAANPVGGHYNRAKTVNENLKMSAALLSRFDLIFILLDKPDEL 550
I+KAG+V SL +R SV+AAANPVGG Y+ +K+ +N++++ +LSRFD++ ++ D D +
Sbjct: 635 ISKAGIVTSLQARCSVIAAANPVGGRYDSSKSFAQNVELTDPILSRFDILCVVKDVVDPV 694
Query: 551 LDKRLSEHIMSLHSGHGQHSPALKKRRGDQPSDSRAAVSQNAEGVDFSVRPGSLISKLKL 610
D+ L+E +++ H QP + S +G+ S GS
Sbjct: 695 TDEMLAEFVVNSHF-------------KSQPKGGKMEDSDPEDGIQGS--SGS------T 733
Query: 611 DPRRDRDFVPLPGQLLRKYIAYARSFVFPRMTKPAADILQKFYLKLRDHNTSADGTPITA 670
DP LP LL+KY+ Y++ +VFP++ + A L+ Y LR + + G I
Sbjct: 734 DPE------VLPQNLLKKYLTYSKLYVFPKLGELDAKKLETVYANLRRESMNGQGVSIAT 787
Query: 671 RQ 672
R
Sbjct: 788 RH 789
>AT2G07690.1 | Symbols: MCM5 | Minichromosome maintenance (MCM2/3/5)
family protein | chr2:3523379-3527388 REVERSE LENGTH=727
Length = 727
Score = 263 bits (671), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 183/553 (33%), Positives = 272/553 (49%), Gaps = 95/553 (17%)
Query: 141 ETMIALKNLKAAYIDKLVSVRGTAVKVSTVRPLVVEMSFECSKCKQVVTRIFP-----DG 195
E ++++ L A YI KLV + G ++ S V+ + C CK+ TR P G
Sbjct: 129 EDPVSMRLLGAQYISKLVKISGISIAASRVKAKATYVFLVCKNCKK--TREVPCRPGLGG 186
Query: 196 KFSPPSTCNL-----NGCKSKNFNPLRSTAKTIDFQKIRVQELLKHEDHEEGRVPRTVEC 250
P S N+ C + + ++ +D Q +++QE ED G +PR +
Sbjct: 187 AIVPRSCDNIPQPGEEPCPLDPWMVVPDRSQYVDQQTLKLQE--NPEDVPTGELPRNMLL 244
Query: 251 ELTQDLVDSCIPGDVVTVTGIIRGISTYMDIGGGKSKNKNQGFYYL---YLEAISIKNSK 307
+ + LV + +PG +TV GI Y S N ++G + Y+ + ++++
Sbjct: 245 SVDRHLVQTIVPGTRLTVMGI------YSIFQASSSSNSHKGAVAIRQPYIRVVGLEDTN 298
Query: 308 SQSIPEDAQDSNPKARPTELFDLFSFSSKDLEFVVKFADEHGSDLFRQILQSICPSIYGH 367
+A P +F+ + E KFAD D+++ I I PSI+GH
Sbjct: 299 ------EASSRGPA----------NFTPDEEEEFKKFADSQ--DVYKNICTKIAPSIFGH 340
Query: 368 ELVKAGITLALFGGVRKNSMDQNKVPVRGDIHVIVVGDPGLGKSQLLQAAAAVSPRGIYV 427
E VK LFGG RK+ D V +RGDI+V+++GDP KSQ L+ +P +Y
Sbjct: 341 EDVKRAAACLLFGGSRKSLPD--GVKLRGDINVLLLGDPSTAKSQFLKFVEKTAPIAVYT 398
Query: 428 CGNATTKAGLTVAVVKDAMTNDYAFEAGAMVLADSGLCCIDEFDKMSAEHQ-ALLEAMEQ 486
G ++ AGLT +V++D+ T ++ E GAMVLAD G+ CIDEFDKM E + A+ EAMEQ
Sbjct: 399 SGKGSSAAGLTASVIRDSSTREFYLEGGAMVLADGGVVCIDEFDKMRPEDRVAIHEAMEQ 458
Query: 487 QCVSIAKAGLVASLSSRTSVLAAANPVGGHYNRAKTVNENLKMSAALLSRFDLIFILLDK 546
Q +SIAKAG+ L+SRTSVLAAANP G Y+ KT +N+ + +LSRFDLIFI+ D
Sbjct: 459 QTISIAKAGITTVLNSRTSVLAAANPPSGRYDDLKTAQDNIDLQTTILSRFDLIFIVKDI 518
Query: 547 PDELLDKRLSEHIMSLHSGHGQHSPALKKRRGDQPSDSRAAVSQNAEGVDFSVRPGSLIS 606
DK ++ HI+ +H+ + S D+ +DS+
Sbjct: 519 RKYSQDKEIASHIIRVHASANKFS--------DENTDSKE-------------------- 550
Query: 607 KLKLDPRRDRDFVPLPGQLLRKYIAYARSFVFPRMTKPAADILQKFY------LKLRDHN 660
L++YI Y R+ PR++K AA+ LQ+ Y +K R H
Sbjct: 551 ----------------DNWLKRYIQYCRARCHPRLSKDAAENLQRKYVTIRMDMKRRAHE 594
Query: 661 T-SADGTPITARQ 672
T A PIT RQ
Sbjct: 595 TGEAAPIPITVRQ 607
>AT2G07690.2 | Symbols: MCM5 | Minichromosome maintenance (MCM2/3/5)
family protein | chr2:3523379-3527388 REVERSE LENGTH=725
Length = 725
Score = 258 bits (659), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 180/542 (33%), Positives = 265/542 (48%), Gaps = 95/542 (17%)
Query: 152 AYIDKLVSVRGTAVKVSTVRPLVVEMSFECSKCKQVVTRIFP-----DGKFSPPSTCNL- 205
YI KLV + G ++ S V+ + C CK+ TR P G P S N+
Sbjct: 138 GYISKLVKISGISIAASRVKAKATYVFLVCKNCKK--TREVPCRPGLGGAIVPRSCDNIP 195
Query: 206 ----NGCKSKNFNPLRSTAKTIDFQKIRVQELLKHEDHEEGRVPRTVECELTQDLVDSCI 261
C + + ++ +D Q +++QE ED G +PR + + + LV + +
Sbjct: 196 QPGEEPCPLDPWMVVPDRSQYVDQQTLKLQE--NPEDVPTGELPRNMLLSVDRHLVQTIV 253
Query: 262 PGDVVTVTGIIRGISTYMDIGGGKSKNKNQGFYYL---YLEAISIKNSKSQSIPEDAQDS 318
PG +TV GI Y S N ++G + Y+ + ++++ +A
Sbjct: 254 PGTRLTVMGI------YSIFQASSSSNSHKGAVAIRQPYIRVVGLEDTN------EASSR 301
Query: 319 NPKARPTELFDLFSFSSKDLEFVVKFADEHGSDLFRQILQSICPSIYGHELVKAGITLAL 378
P +F+ + E KFAD D+++ I I PSI+GHE VK L
Sbjct: 302 GPA----------NFTPDEEEEFKKFADSQ--DVYKNICTKIAPSIFGHEDVKRAAACLL 349
Query: 379 FGGVRKNSMDQNKVPVRGDIHVIVVGDPGLGKSQLLQAAAAVSPRGIYVCGNATTKAGLT 438
FGG RK+ D V +RGDI+V+++GDP KSQ L+ +P +Y G ++ AGLT
Sbjct: 350 FGGSRKSLPD--GVKLRGDINVLLLGDPSTAKSQFLKFVEKTAPIAVYTSGKGSSAAGLT 407
Query: 439 VAVVKDAMTNDYAFEAGAMVLADSGLCCIDEFDKMSAEHQ-ALLEAMEQQCVSIAKAGLV 497
+V++D+ T ++ E GAMVLAD G+ CIDEFDKM E + A+ EAMEQQ +SIAKAG+
Sbjct: 408 ASVIRDSSTREFYLEGGAMVLADGGVVCIDEFDKMRPEDRVAIHEAMEQQTISIAKAGIT 467
Query: 498 ASLSSRTSVLAAANPVGGHYNRAKTVNENLKMSAALLSRFDLIFILLDKPDELLDKRLSE 557
L+SRTSVLAAANP G Y+ KT +N+ + +LSRFDLIFI+ D DK ++
Sbjct: 468 TVLNSRTSVLAAANPPSGRYDDLKTAQDNIDLQTTILSRFDLIFIVKDIRKYSQDKEIAS 527
Query: 558 HIMSLHSGHGQHSPALKKRRGDQPSDSRAAVSQNAEGVDFSVRPGSLISKLKLDPRRDRD 617
HI+ +H+ + S D+ +DS+
Sbjct: 528 HIIRVHASANKFS--------DENTDSKE------------------------------- 548
Query: 618 FVPLPGQLLRKYIAYARSFVFPRMTKPAADILQKFY------LKLRDHNT-SADGTPITA 670
L++YI Y R+ PR++K AA+ LQ+ Y +K R H T A PIT
Sbjct: 549 -----DNWLKRYIQYCRARCHPRLSKDAAENLQRKYVTIRMDMKRRAHETGEAAPIPITV 603
Query: 671 RQ 672
RQ
Sbjct: 604 RQ 605
>AT2G14050.1 | Symbols: MCM9 | minichromosome maintenance 9 |
chr2:5909240-5913817 FORWARD LENGTH=646
Length = 646
Score = 231 bits (588), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 167/547 (30%), Positives = 261/547 (47%), Gaps = 88/547 (16%)
Query: 136 LHNCPETMIALKNLKAAYIDKLVSVRGTAVKVSTVRPLVVEMSFECSKCKQVVTRIFPD- 194
L PET ++ ++ + L+ ++GT ++ V+ E + C KCK + IFP+
Sbjct: 110 LERSPETFPSIGRVRVKHRGILMMLKGTVIRSGAVKMYEGEKMYRCRKCKHMFP-IFPEL 168
Query: 195 ---GKFSPPSTC---NLNGCKSKNFNPLRSTAKTIDFQKIRVQELLKHEDHEEGRVPRTV 248
P C C+ NF+P+ T D+Q+I++QE + G +PR++
Sbjct: 169 ESINSIVKPPFCPSQRSKACEGTNFDPVDDTVTRHDYQEIKIQE--NTQVLGVGVIPRSI 226
Query: 249 ECELTQDLVDSCIPGDVVTVTGIIRGISTYMDIGGGKSKNKNQGFYYLYLEAISIKNSKS 308
L DLVD+ GD V V+GI+ ++ D+ + LE + I
Sbjct: 227 LVVLKDDLVDNVKAGDDVVVSGILTSKWSH-DLKDVRCD----------LEPMLI----- 270
Query: 309 QSIPEDAQDSNPKARPTELFDLFSFSSKDLEFVVKFADEHGSDLFR---QILQSICPSIY 365
+N R EL S +E F + IL+ ICP ++
Sbjct: 271 ---------ANHVRRTNELKSEIDISDDLIEKFKNFWSHFRDTPLKGRNAILRGICPQVF 321
Query: 366 GHELVKAGITLALFGGVRKNSMDQNKVPVRGDIHVIVVGDPGLGKSQLLQAAAAVSPRGI 425
G VK + L L GGV+ +D + VRG+ H++++GDPG GKSQ L+ AA +S R +
Sbjct: 322 GLFTVKLAVALTLIGGVQH--VDASGTKVRGESHLLLIGDPGTGKSQFLKFAAKLSNRAV 379
Query: 426 YVCGNATTKAGLTVAVVKDAMTNDYAFEAGAMVLADSGLCCIDEFDKMSAEHQALL-EAM 484
G +T AGLTV VKD ++ EAGA+VLAD GLCCIDEFD M +A + EAM
Sbjct: 380 ITTGLGSTSAGLTVTAVKDG--GEWMLEAGALVLADGGLCCIDEFDSMREHDRATIHEAM 437
Query: 485 EQQCVSIAKAGLVASLSSRTSVLAAANPVGGHYNRAKTVNENLKMSAALLSRFDLIFILL 544
EQQ +S+AKAGLV +LS++T V A NP G Y+ ++++ N +S LLSRFD++ +LL
Sbjct: 438 EQQSISVAKAGLVTTLSTKTIVFGATNP-KGQYDPDQSLSVNTALSGPLLSRFDIVLVLL 496
Query: 545 DKPDELLDKRLSEHIMSLHSGHGQHSPALKKRRGDQPSDSRAAVSQNAEGVDFSVRPGSL 604
D + D +S HI+ + + Q+ E D +
Sbjct: 497 DTKNPEWDAVVSSHIL-----------------------AEVQIEQDREVDDLTT----- 528
Query: 605 ISKLKLDPRRDRDFVPLPGQLLRKYIAYARSFVFPRMTKPAADILQKFYLKLRDHNTSAD 664
PLP +L++YI + + P ++K A +I+ +Y +L+ +++ +
Sbjct: 529 -------------IWPLP--MLQRYIQFVKKNFRPVLSKEAEEIISSYY-RLQRRSSTHN 572
Query: 665 GTPITAR 671
T R
Sbjct: 573 AARTTVR 579