Miyakogusa Predicted Gene
- Lj1g3v4578920.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v4578920.2 Non Chatacterized Hit- tr|C5Z4C1|C5Z4C1_SORBI
Putative uncharacterized protein Sb10g003720 OS=Sorghu,28.25,9e-19,no
description,Tetratricopeptide-like helical; SUBFAMILY NOT NAMED,NULL;
FAMILY NOT NAMED,NULL; PPR_,CUFF.32707.2
(354 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 482 e-136
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 122 4e-28
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 118 5e-27
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 118 5e-27
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 118 5e-27
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 118 8e-27
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 4e-26
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 115 6e-26
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 113 2e-25
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 112 4e-25
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 6e-25
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 111 9e-25
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 110 1e-24
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 110 2e-24
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 110 2e-24
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 2e-24
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 108 5e-24
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 6e-24
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 108 6e-24
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 108 7e-24
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 8e-24
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 107 1e-23
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 107 1e-23
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 107 2e-23
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 3e-23
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 104 7e-23
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 104 8e-23
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 8e-23
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 104 8e-23
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 1e-22
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 1e-22
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 102 4e-22
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 102 4e-22
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 6e-22
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 6e-22
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 1e-21
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 1e-21
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 1e-21
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 1e-21
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 1e-21
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 1e-21
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 2e-21
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 100 2e-21
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 100 2e-21
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 2e-21
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 99 3e-21
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 3e-21
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 5e-21
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 5e-21
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 6e-21
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 98 7e-21
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 98 8e-21
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 1e-20
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 97 1e-20
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 1e-20
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 97 2e-20
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 97 2e-20
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 97 2e-20
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 3e-20
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 96 3e-20
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 96 3e-20
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 4e-20
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 4e-20
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 4e-20
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 5e-20
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 6e-20
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 6e-20
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 95 6e-20
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 8e-20
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 1e-19
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 1e-19
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 2e-19
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 2e-19
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 2e-19
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 92 4e-19
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 4e-19
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 92 4e-19
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 4e-19
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 5e-19
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 6e-19
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 92 7e-19
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 8e-19
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 91 8e-19
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 91 8e-19
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 91 1e-18
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 1e-18
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 91 1e-18
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 91 1e-18
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 90 2e-18
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 3e-18
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 3e-18
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 4e-18
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 4e-18
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 7e-18
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 7e-18
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 1e-17
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 1e-17
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 88 1e-17
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 87 1e-17
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 87 1e-17
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 1e-17
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 2e-17
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 2e-17
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 87 2e-17
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 3e-17
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 3e-17
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 3e-17
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 8e-17
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 85 8e-17
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 1e-16
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 1e-16
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 1e-16
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 1e-16
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 2e-16
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 83 3e-16
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 4e-16
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 5e-16
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 7e-16
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 7e-16
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 7e-16
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 7e-16
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 8e-16
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 9e-16
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 9e-16
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 9e-16
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 2e-15
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 2e-15
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 80 2e-15
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 2e-15
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 2e-15
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 2e-15
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 4e-15
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 4e-15
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 5e-15
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 1e-14
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 77 2e-14
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 77 2e-14
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 3e-14
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 3e-14
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 3e-14
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 3e-14
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 4e-14
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 4e-14
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 5e-14
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 75 5e-14
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 9e-14
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 1e-13
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 74 1e-13
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 1e-13
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 74 2e-13
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 2e-13
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 2e-13
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 3e-13
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 3e-13
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 73 4e-13
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 72 4e-13
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 4e-13
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 6e-13
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 7e-13
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 72 8e-13
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 8e-13
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 71 9e-13
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 71 1e-12
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 1e-12
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 2e-12
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 2e-12
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 2e-12
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 3e-12
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 4e-12
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 4e-12
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 5e-12
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 69 5e-12
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 5e-12
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 6e-12
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 8e-12
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 8e-12
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 8e-12
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 1e-11
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 1e-11
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 1e-11
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 67 2e-11
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 3e-11
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 3e-11
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 66 3e-11
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 4e-11
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 4e-11
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 66 5e-11
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 65 5e-11
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 5e-11
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 5e-11
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 7e-11
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 65 1e-10
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 64 1e-10
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 64 1e-10
AT4G35850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 2e-10
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 3e-10
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 3e-10
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 63 3e-10
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 63 4e-10
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 4e-10
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 5e-10
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 5e-10
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 62 5e-10
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 5e-10
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 6e-10
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 6e-10
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 8e-10
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 1e-09
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 1e-09
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 61 1e-09
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 1e-09
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 1e-09
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 61 1e-09
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 1e-09
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 2e-09
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 2e-09
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 2e-09
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 2e-09
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 2e-09
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 2e-09
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 60 2e-09
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 2e-09
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 2e-09
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 2e-09
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 2e-09
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 2e-09
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 59 4e-09
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 4e-09
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 4e-09
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 5e-09
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 5e-09
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 5e-09
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 5e-09
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 5e-09
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 6e-09
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 6e-09
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 6e-09
AT1G76280.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 7e-09
AT1G76280.3 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 7e-09
AT1G76280.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 7e-09
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 7e-09
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 9e-09
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 58 9e-09
AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 58 1e-08
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 58 1e-08
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 57 1e-08
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 57 1e-08
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 1e-08
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 1e-08
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 57 2e-08
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 2e-08
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 57 3e-08
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 3e-08
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 3e-08
AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR) repeat-... 56 3e-08
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 3e-08
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 4e-08
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 4e-08
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 56 4e-08
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 4e-08
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 4e-08
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 56 4e-08
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 4e-08
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 4e-08
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 5e-08
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 5e-08
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 55 5e-08
AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 5e-08
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 5e-08
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 6e-08
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 6e-08
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 6e-08
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 6e-08
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 6e-08
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 7e-08
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 7e-08
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 55 1e-07
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 1e-07
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 1e-07
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 1e-07
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 54 2e-07
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 54 2e-07
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 54 2e-07
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 3e-07
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 53 3e-07
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 3e-07
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 3e-07
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 53 3e-07
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 4e-07
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 4e-07
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 4e-07
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 4e-07
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 52 5e-07
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 52 5e-07
AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 5e-07
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 5e-07
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 52 6e-07
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 6e-07
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 6e-07
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 52 7e-07
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 7e-07
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 7e-07
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 8e-07
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 8e-07
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 1e-06
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 51 1e-06
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 2e-06
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 50 2e-06
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 2e-06
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 50 2e-06
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 2e-06
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 2e-06
AT5G67570.1 | Symbols: EMB246, DG1, EMB1408 | Tetratricopeptide ... 50 2e-06
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 3e-06
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-06
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 4e-06
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 4e-06
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 49 4e-06
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 49 4e-06
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 6e-06
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 7e-06
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 7e-06
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 49 8e-06
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 48 8e-06
>AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:644458-648421 REVERSE
LENGTH=852
Length = 852
Score = 482 bits (1241), Expect = e-136, Method: Compositional matrix adjust.
Identities = 231/355 (65%), Positives = 278/355 (78%), Gaps = 6/355 (1%)
Query: 1 MNVNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVG 60
MNVNS DL YTL +Y+ MQ L + DMTSYNILLK CC+AGRVDLAQD+YKE K +ES G
Sbjct: 309 MNVNSHDLGYTLKVYKNMQILDVTADMTSYNILLKTCCLAGRVDLAQDIYKEAKRMESSG 368
Query: 61 RLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQA 120
LKLD FTY TIIKVFADAK+W+ ALKVK DM+S GV NT WSSLI+ACA+AGLVEQA
Sbjct: 369 LLKLDAFTYCTIIKVFADAKMWKWALKVKDDMKSVGVTPNTHTWSSLISACANAGLVEQA 428
Query: 121 IQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSF------GEG 174
LFEEML +GCEPN+QCFNI+LHACVEACQYDRAFR F SWKG+ + S +G
Sbjct: 429 NHLFEEMLASGCEPNSQCFNILLHACVEACQYDRAFRLFQSWKGSSVNESLYADDIVSKG 488
Query: 175 YNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKALIN 234
S+ + ++ N SNS + ++RF F PTT+TYN LLKACG+DYY K L++
Sbjct: 489 RTSSPNILKNNGPGSLVNRNSNSPYIQASKRFCFKPTTATYNILLKACGTDYYRGKELMD 548
Query: 235 EMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESK 294
EMK++GLSPNQITWS LID+CGG+ +VEGA+ IL++M AG +PDV+AYTTAIK+C E+K
Sbjct: 549 EMKSLGLSPNQITWSTLIDMCGGSGDVEGAVRILRTMHSAGTRPDVVAYTTAIKICAENK 608
Query: 295 NFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGY 349
K A +L+EEM+ +I PNWVTYNTLLKARSKYGS+LEV+QCLAIYQDM+ AGY
Sbjct: 609 CLKLAFSLFEEMRRYQIKPNWVTYNTLLKARSKYGSLLEVRQCLAIYQDMRNAGY 663
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 97/389 (24%), Positives = 179/389 (46%), Gaps = 64/389 (16%)
Query: 4 NSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLK 63
+ R++++ N+++ M + P++ +YNIL++ C AG +D+A ++ ++ E+ G L
Sbjct: 182 SKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKM---ETKGCLP 238
Query: 64 LDVFTYSTIIKVFADAK--------LWQMALK---------------------------V 88
+V TY+T+I + + L MALK V
Sbjct: 239 -NVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFV 297
Query: 89 KHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVE 148
+M G +L+ V +++LI G QA+ + EML G P+ + ++H+ +
Sbjct: 298 LTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCK 357
Query: 149 ACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNS-------QILS 201
A +RA F + G N + TT+ +GFS ++L
Sbjct: 358 AGNMNRAMEFLDQMRV--------RGLCPNER-----TYTTLVDGFSQKGYMNEAYRVLR 404
Query: 202 FTERFPFTPTTSTYNTLLKA--CGSDYYHAKALINEMKTVGLSPNQITWSILIDICGGTE 259
F+P+ TYN L+ A A++ +MK GLSP+ +++S ++ +
Sbjct: 405 EMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSY 464
Query: 260 NVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYN 319
+V+ A+ + + M + GIKPD I Y++ I+ E + K+A LYEEM + P+ TY
Sbjct: 465 DVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYT 524
Query: 320 TLLKARSKYGSVLEVQQCLAIYQDMQKAG 348
L+ A G ++++ L ++ +M + G
Sbjct: 525 ALINAYCMEG---DLEKALQLHNEMVEKG 550
Score = 115 bits (287), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 94/347 (27%), Positives = 172/347 (49%), Gaps = 30/347 (8%)
Query: 12 LNIYQIMQNLGLKPDMTSYNILLKACCVAGR-VDLAQDMYKELKHLESVGRLKLDVFTYS 70
L+I + Q G P + SYN +L A + R + A++++KE+ LES ++ +VFTY+
Sbjct: 154 LSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEM--LES--QVSPNVFTYN 209
Query: 71 TIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLA 130
+I+ F A +AL + M + G N V +++LI+ ++ +L M L
Sbjct: 210 ILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALK 269
Query: 131 GCEPNTQCFNIILHA-CVEACQYDRAFRFFHSWKGNKMLGSFGE-GYNSNL----KQGSI 184
G EPN +N++++ C E + +F + N+ S E YN+ + K+G+
Sbjct: 270 GLEPNLISYNVVINGLCREGRMKEVSFVL---TEMNRRGYSLDEVTYNTLIKGYCKEGNF 326
Query: 185 HNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKAC--GSDYYHAKALINEMKTVGLS 242
H A + ++++L R TP+ TY +L+ + + A +++M+ GL
Sbjct: 327 HQALVM-----HAEML----RHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLC 377
Query: 243 PNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIK-VCVESKNFKQALT 301
PN+ T++ L+D + A +L+ M D G P V+ Y I CV K + A+
Sbjct: 378 PNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGK-MEDAIA 436
Query: 302 LYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAG 348
+ E+MK + P+ V+Y+T+L S + +V + L + ++M + G
Sbjct: 437 VLEDMKEKGLSPDVVSYSTVL---SGFCRSYDVDEALRVKREMVEKG 480
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/322 (24%), Positives = 143/322 (44%), Gaps = 18/322 (5%)
Query: 22 GLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKL 81
GL+P++ SYN+++ C GR+ + E+ LD TY+T+IK +
Sbjct: 270 GLEPNLISYNVVINGLCREGRMKEVSFVLTEMNR----RGYSLDEVTYNTLIKGYCKEGN 325
Query: 82 WQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNI 141
+ AL + +M G+ + + ++SLI++ AG + +A++ ++M + G PN + +
Sbjct: 326 FHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTT 385
Query: 142 ILHACVEACQYDRAFRFFHSWKGNKMLGS---FGEGYNSNLKQGSIHNATTVPNGFSNSQ 198
++ + + A+R N S + N + G + +A V
Sbjct: 386 LVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAV-------- 437
Query: 199 ILSFTERFPFTPTTSTYNTLLKA-CGS-DYYHAKALINEMKTVGLSPNQITWSILIDICG 256
L + +P +Y+T+L C S D A + EM G+ P+ IT+S LI
Sbjct: 438 -LEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFC 496
Query: 257 GTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWV 316
+ A ++ + M G+ PD YT I + ++AL L+ EM + P+ V
Sbjct: 497 EQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVV 556
Query: 317 TYNTLLKARSKYGSVLEVQQCL 338
TY+ L+ +K E ++ L
Sbjct: 557 TYSVLINGLNKQSRTREAKRLL 578
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/332 (25%), Positives = 145/332 (43%), Gaps = 50/332 (15%)
Query: 18 MQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFA 77
M + G P + +YN L+ CV G+++ A + +++K L DV +YST++ F
Sbjct: 406 MNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKE----KGLSPDVVSYSTVLSGFC 461
Query: 78 DAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQ 137
+ AL+VK +M G+ +T+ +SSLI ++A L+EEML G P+
Sbjct: 462 RSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEF 521
Query: 138 CFNIILHA-CVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATT---VPNG 193
+ +++A C+E ++A + +N +++G + + T + NG
Sbjct: 522 TYTALINAYCMEG-DLEKALQL----------------HNEMVEKGVLPDVVTYSVLING 564
Query: 194 FSNSQILSFTERFPF-------TPTTSTYNTLLKACGSDYYHAKALINEMKTVGLSPNQI 246
+ +R P+ TY+TL++ C + E K+V
Sbjct: 565 LNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNI---------EFKSV------- 608
Query: 247 TWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEM 306
S++ C E A ++ +SM KPD AY I + + ++A TLY+EM
Sbjct: 609 -VSLIKGFCMKGMMTE-ADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEM 666
Query: 307 KSCEIHPNWVTYNTLLKARSKYGSVLEVQQCL 338
+ VT L+KA K G V E+ +
Sbjct: 667 VKSGFLLHTVTVIALVKALHKEGKVNELNSVI 698
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 69/146 (47%), Gaps = 8/146 (5%)
Query: 5 SRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKL 64
S D+ L + + M G+KPD +Y+ L++ C R A D+Y+E+ VG L
Sbjct: 463 SYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLR---VG-LPP 518
Query: 65 DVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLF 124
D FTY+ +I + + AL++ ++M GV + V +S LIN +A +L
Sbjct: 519 DEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLL 578
Query: 125 EEMLLAGCEPNTQCFNIILHACVEAC 150
++ P+ ++ H +E C
Sbjct: 579 LKLFYEESVPS----DVTYHTLIENC 600
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 118 bits (296), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 87/312 (27%), Positives = 146/312 (46%), Gaps = 33/312 (10%)
Query: 25 PDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQM 84
P+ +YN L+ C AG+++ A+++ +K E +K +V T +TI+ M
Sbjct: 404 PNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDE----IKPNVVTVNTIVGGMCRHHGLNM 459
Query: 85 ALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILH 144
A+ DM GV N V + +LI+AC VE+A+ +E+ML AGC P+ + + ++
Sbjct: 460 AVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALIS 519
Query: 145 ACVEACQYDRAFRFFHSWKG----------NKMLGSFGEGYNSNLKQGSIHNATTVPNGF 194
+ + A R K N ++G F + +NA V
Sbjct: 520 GLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDK----------NNAEKV---- 565
Query: 195 SNSQILSFTERFPFTPTTSTYNTLLKACGS--DYYHAKALINEMKTVGLSPNQITWSILI 252
++L+ E+ P + TYNTL+ G D+ + ++ +M+ GL P T+ +I
Sbjct: 566 --YEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVI 623
Query: 253 DICGGTENVEGAIEILKSMG-DAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEI 311
D ++ A+++ K MG + + P+ + Y I + NF QAL+L EEMK +
Sbjct: 624 DAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMV 683
Query: 312 HPNWVTYNTLLK 323
PN TYN L K
Sbjct: 684 RPNVETYNALFK 695
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/351 (23%), Positives = 155/351 (44%), Gaps = 30/351 (8%)
Query: 7 DLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKEL--KHLESVGRLKL 64
D++ ++ M + ++PD+ + IL+ C + RVD A ++++++ K + +K
Sbjct: 309 DISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKA 368
Query: 65 DVFTYSTII----KVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQA 120
D ++T+I KV + ++ +++K + R N V ++ LI+ AG +E A
Sbjct: 369 DSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVP---NAVTYNCLIDGYCRAGKLETA 425
Query: 121 IQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLK 180
++ M +PN N I+ + A FF + EG N+
Sbjct: 426 KEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEK--------EGVKGNVV 477
Query: 181 --QGSIHNATTVPNGFSNSQILSFTERF---PFTPTTSTYNTLLKA-CGSDYYH-AKALI 233
IH +V N + + + E+ +P Y L+ C H A ++
Sbjct: 478 TYMTLIHACCSVSNV---EKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVV 534
Query: 234 NEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVES 293
++K G S + + +++LI + N E E+L M G KPD I Y T I +
Sbjct: 535 EKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKH 594
Query: 294 KNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDM 344
K+F+ + E+M+ + P TY ++ A Y SV E+ + L +++DM
Sbjct: 595 KDFESVERMMEQMREDGLDPTVTTYGAVIDA---YCSVGELDEALKLFKDM 642
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 112/257 (43%), Gaps = 56/257 (21%)
Query: 12 LNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYST 71
+ + + ++ G D+ +YN+L+ C A+ +Y+ L +E G+ K D TY+T
Sbjct: 531 IRVVEKLKEGGFSLDLLAYNMLIGLFCDKNN---AEKVYEMLTDMEKEGK-KPDSITYNT 586
Query: 72 IIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEM-LLA 130
+I F K ++ ++ MR G++ + ++I+A G +++A++LF++M L +
Sbjct: 587 LISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHS 646
Query: 131 GCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTV 190
PNT +NI+++A + LG+FG
Sbjct: 647 KVNPNTVIYNILINAFSK-------------------LGNFG------------------ 669
Query: 191 PNGFSNSQILSFTERFPFT---PTTSTYNTLLKACGSDYYHAKALI---NEMKTVGLSPN 244
Q LS E P TYN L K C ++ + L+ +EM PN
Sbjct: 670 -------QALSLKEEMKMKMVRPNVETYNALFK-CLNEKTQGETLLKLMDEMVEQSCEPN 721
Query: 245 QITWSILIDICGGTENV 261
QIT IL++ G++ +
Sbjct: 722 QITMEILMERLSGSDEL 738
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 72/157 (45%), Gaps = 3/157 (1%)
Query: 6 RDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLD 65
+D + + M+ GL P +T+Y ++ A C G +D A ++K++ L S ++ +
Sbjct: 595 KDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDM-GLHS--KVNPN 651
Query: 66 VFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFE 125
Y+ +I F+ + AL +K +M+ V N +++L E ++L +
Sbjct: 652 TVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMD 711
Query: 126 EMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSW 162
EM+ CEPN I++ + + + +F +
Sbjct: 712 EMVEQSCEPNQITMEILMERLSGSDELVKLRKFMQGY 748
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 118 bits (296), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 93/357 (26%), Positives = 160/357 (44%), Gaps = 23/357 (6%)
Query: 3 VNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRL 62
V +D +++ M G+KPD+ YN ++ A C G +D A KE++ L R
Sbjct: 530 VKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKL----RH 585
Query: 63 KLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQ 122
+ T+ II +A + + +L+V MR G ++ LIN +E+A++
Sbjct: 586 RPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVE 645
Query: 123 LFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKM---LGSFGEGYNSNL 179
+ +EM LAG N + I+ +AF +F + + + ++ +
Sbjct: 646 ILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACC 705
Query: 180 KQGSIHNATTVPNGFSNSQILSFTERFPFTPTTS-TYNTLLK--ACGSDYYHAKALINEM 236
K G + +A V S I P S YN L+ A D + A LI +M
Sbjct: 706 KSGRMQSALAVTKEMSARNI----------PRNSFVYNILIDGWARRGDVWEAADLIQQM 755
Query: 237 KTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNF 296
K G+ P+ T++ I C ++ A + ++ M G+KP++ YTT IK +
Sbjct: 756 KKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLP 815
Query: 297 KQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEV---QQCLAIYQDMQKAGYV 350
++AL+ YEEMK+ I P+ Y+ LL + S+ E + I ++M +AG +
Sbjct: 816 EKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEAYIYSGVMTICKEMVEAGLI 872
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 93/378 (24%), Positives = 166/378 (43%), Gaps = 48/378 (12%)
Query: 7 DLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDV 66
D L +++ ++ G P + +Y L+ G++ A ++ + +K E V K ++
Sbjct: 464 DEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKE-EGV---KHNL 519
Query: 67 FTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEE 126
TYS +I F K W A V DM G+ + + ++++I+A G +++AIQ +E
Sbjct: 520 KTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKE 579
Query: 127 MLLAGCEPNTQCFNIILHACVEACQYDRAFRFF------------HSWKG---------- 164
M P T+ F I+H ++ R+ F H++ G
Sbjct: 580 MQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQ 639
Query: 165 -NKMLGSFGE----GYNSNLKQGSIHNATTVPNGFSN----SQILSFTERFP---FTPTT 212
K + E G ++N H T + G+++ + + R
Sbjct: 640 MEKAVEILDEMTLAGVSANE-----HTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDI 694
Query: 213 STYNTLLKAC--GSDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKS 270
TY LLKAC A A+ EM + N ++ILID +V A ++++
Sbjct: 695 FTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQ 754
Query: 271 MGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGS 330
M G+KPD+ YT+ I C ++ + +A EEM++ + PN TY TL+K ++ S
Sbjct: 755 MKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWAR-AS 813
Query: 331 VLEVQQCLAIYQDMQKAG 348
+ E + L+ Y++M+ G
Sbjct: 814 LPE--KALSCYEEMKAMG 829
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 71/333 (21%), Positives = 139/333 (41%), Gaps = 23/333 (6%)
Query: 24 KPDMTSYNILLKACCVAGRVDLAQDMYKELKH--LESVGRLKLDVFTYSTIIKVFADAKL 81
KP T + +++K G + A++ ++ ++ + R+ Y+++I +A +
Sbjct: 306 KPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRI------YTSLIHAYAVGRD 359
Query: 82 WQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNI 141
AL M+ G+ ++ V +S ++ + AG E A F+E N +
Sbjct: 360 MDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGK 419
Query: 142 ILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLK--QGSIHNATTVPNGFSNSQI 199
I++A + C +RA + EG ++ + + T V + +
Sbjct: 420 IIYAHCQTCNMERAEALVREME--------EEGIDAPIAIYHTMMDGYTMVADEKKGLVV 471
Query: 200 LSFTERFPFTPTTSTYNTLLKACGSDYYHAKAL--INEMKTVGLSPNQITWSILIDICGG 257
+ FTPT TY L+ +KAL MK G+ N T+S++I+
Sbjct: 472 FKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVK 531
Query: 258 TENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVT 317
++ A + + M G+KPDVI Y I N +A+ +EM+ P T
Sbjct: 532 LKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRT 591
Query: 318 YNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYV 350
+ ++ +K G ++++ L ++ M++ G V
Sbjct: 592 FMPIIHGYAKSG---DMRRSLEVFDMMRRCGCV 621
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 77/405 (19%), Positives = 154/405 (38%), Gaps = 65/405 (16%)
Query: 6 RDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHL--------- 56
RD+ L+ + M+ G++ + +Y++++ AG + A + E K +
Sbjct: 358 RDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIY 417
Query: 57 ----------------ESVGR------LKLDVFTYSTIIKVFADAKLWQMALKVKHDMRS 94
E++ R + + Y T++ + + L V ++
Sbjct: 418 GKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKE 477
Query: 95 AGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDR 154
G V + LIN G + +A+++ M G + N + ++++++ V+ +
Sbjct: 478 CGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWAN 537
Query: 155 AFRFFHSWKGNKM----------------LGSFGEGYNS-NLKQGSIHNATT-----VPN 192
AF F M +G+ + Q H TT + +
Sbjct: 538 AFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIH 597
Query: 193 GFSNS-------QILSFTERFPFTPTTSTYNTLLKACGSDYYHAKA--LINEMKTVGLSP 243
G++ S ++ R PT T+N L+ KA +++EM G+S
Sbjct: 598 GYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSA 657
Query: 244 NQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLY 303
N+ T++ ++ + A E + + G+ D+ Y +K C +S + AL +
Sbjct: 658 NEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVT 717
Query: 304 EEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAG 348
+EM + I N YN L+ ++ G V E + Q M+K G
Sbjct: 718 KEMSARNIPRNSFVYNILIDGWARRGDVWEAADLI---QQMKKEG 759
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 118 bits (296), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 87/312 (27%), Positives = 146/312 (46%), Gaps = 33/312 (10%)
Query: 25 PDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQM 84
P+ +YN L+ C AG+++ A+++ +K E +K +V T +TI+ M
Sbjct: 404 PNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDE----IKPNVVTVNTIVGGMCRHHGLNM 459
Query: 85 ALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILH 144
A+ DM GV N V + +LI+AC VE+A+ +E+ML AGC P+ + + ++
Sbjct: 460 AVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALIS 519
Query: 145 ACVEACQYDRAFRFFHSWKG----------NKMLGSFGEGYNSNLKQGSIHNATTVPNGF 194
+ + A R K N ++G F + +NA V
Sbjct: 520 GLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDK----------NNAEKV---- 565
Query: 195 SNSQILSFTERFPFTPTTSTYNTLLKACGS--DYYHAKALINEMKTVGLSPNQITWSILI 252
++L+ E+ P + TYNTL+ G D+ + ++ +M+ GL P T+ +I
Sbjct: 566 --YEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVI 623
Query: 253 DICGGTENVEGAIEILKSMG-DAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEI 311
D ++ A+++ K MG + + P+ + Y I + NF QAL+L EEMK +
Sbjct: 624 DAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMV 683
Query: 312 HPNWVTYNTLLK 323
PN TYN L K
Sbjct: 684 RPNVETYNALFK 695
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/351 (23%), Positives = 155/351 (44%), Gaps = 30/351 (8%)
Query: 7 DLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKEL--KHLESVGRLKL 64
D++ ++ M + ++PD+ + IL+ C + RVD A ++++++ K + +K
Sbjct: 309 DISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKA 368
Query: 65 DVFTYSTII----KVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQA 120
D ++T+I KV + ++ +++K + R N V ++ LI+ AG +E A
Sbjct: 369 DSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVP---NAVTYNCLIDGYCRAGKLETA 425
Query: 121 IQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLK 180
++ M +PN N I+ + A FF + EG N+
Sbjct: 426 KEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEK--------EGVKGNVV 477
Query: 181 --QGSIHNATTVPNGFSNSQILSFTERF---PFTPTTSTYNTLLKA-CGSDYYH-AKALI 233
IH +V N + + + E+ +P Y L+ C H A ++
Sbjct: 478 TYMTLIHACCSVSNV---EKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVV 534
Query: 234 NEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVES 293
++K G S + + +++LI + N E E+L M G KPD I Y T I +
Sbjct: 535 EKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKH 594
Query: 294 KNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDM 344
K+F+ + E+M+ + P TY ++ A Y SV E+ + L +++DM
Sbjct: 595 KDFESVERMMEQMREDGLDPTVTTYGAVIDA---YCSVGELDEALKLFKDM 642
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 61/135 (45%), Gaps = 5/135 (3%)
Query: 18 MQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFA 77
M+ G KPD +YN L+ + + M ++++ L V TY +I +
Sbjct: 572 MEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMRE----DGLDPTVTTYGAVIDAYC 627
Query: 78 DAKLWQMALKVKHDM-RSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNT 136
ALK+ DM + VN NTV ++ LINA + G QA+ L EEM + PN
Sbjct: 628 SVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNV 687
Query: 137 QCFNIILHACVEACQ 151
+ +N + E Q
Sbjct: 688 ETYNALFKCLNEKTQ 702
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 118 bits (295), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 85/312 (27%), Positives = 144/312 (46%), Gaps = 33/312 (10%)
Query: 25 PDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQM 84
P+ +YN L+ C AG+++ A+++ +K E +K +V T +TI+ M
Sbjct: 404 PNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDE----IKPNVVTVNTIVGGMCRHHGLNM 459
Query: 85 ALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILH 144
A+ DM GV N V + +LI+AC VE+A+ +E+ML AGC P+ + + ++
Sbjct: 460 AVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALIS 519
Query: 145 ACVEACQYDRAFRFFHSWKG----------NKMLGSFGEGYNSNLKQGSIHNATTVPNGF 194
+ + A R K N ++G F + N+
Sbjct: 520 GLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTE---------------- 563
Query: 195 SNSQILSFTERFPFTPTTSTYNTLLKACGS--DYYHAKALINEMKTVGLSPNQITWSILI 252
++L+ E+ P + TYNTL+ G D+ + ++ +M+ GL P T+ +I
Sbjct: 564 KVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVI 623
Query: 253 DICGGTENVEGAIEILKSMG-DAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEI 311
D ++ A+++ K MG + + P+ + Y I + NF QAL+L EEMK +
Sbjct: 624 DAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMV 683
Query: 312 HPNWVTYNTLLK 323
PN TYN L K
Sbjct: 684 RPNVETYNALFK 695
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 84/351 (23%), Positives = 156/351 (44%), Gaps = 30/351 (8%)
Query: 7 DLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKEL--KHLESVGRLKL 64
D++ ++ M + ++PD+ + IL+ C + RVD A ++++++ K + +K
Sbjct: 309 DISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKA 368
Query: 65 DVFTYSTII----KVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQA 120
D ++T+I KV + ++ +++K + R A N V ++ LI+ AG +E A
Sbjct: 369 DSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAP---NAVTYNCLIDGYCRAGKLETA 425
Query: 121 IQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLK 180
++ M +PN N I+ + A FF + EG N+
Sbjct: 426 KEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEK--------EGVKGNVV 477
Query: 181 --QGSIHNATTVPNGFSNSQILSFTERF---PFTPTTSTYNTLLKA-CGSDYYH-AKALI 233
IH +V N + + + E+ +P Y L+ C H A ++
Sbjct: 478 TYMTLIHACCSVSNV---EKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVV 534
Query: 234 NEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVES 293
++K G S + + +++LI + N E E+L M G KPD I Y T I +
Sbjct: 535 EKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKH 594
Query: 294 KNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDM 344
K+F+ + E+M+ + P TY ++ A Y SV E+ + L +++DM
Sbjct: 595 KDFESVERMMEQMREDGLDPTVTTYGAVIDA---YCSVGELDEALKLFKDM 642
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 111/257 (43%), Gaps = 56/257 (21%)
Query: 12 LNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYST 71
+ + + ++ G D+ +YN+L+ C + +Y+ L +E G+ K D TY+T
Sbjct: 531 IRVVEKLKEGGFSLDLLAYNMLIGLFCDKNN---TEKVYEMLTDMEKEGK-KPDSITYNT 586
Query: 72 IIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEM-LLA 130
+I F K ++ ++ MR G++ + ++I+A G +++A++LF++M L +
Sbjct: 587 LISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHS 646
Query: 131 GCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTV 190
PNT +NI+++A + LG+FG
Sbjct: 647 KVNPNTVIYNILINAFSK-------------------LGNFG------------------ 669
Query: 191 PNGFSNSQILSFTERFPFT---PTTSTYNTLLKACGSDYYHAKALI---NEMKTVGLSPN 244
Q LS E P TYN L K C ++ + L+ +EM PN
Sbjct: 670 -------QALSLKEEMKMKMVRPNVETYNALFK-CLNEKTQGETLLKLMDEMVEQSCEPN 721
Query: 245 QITWSILIDICGGTENV 261
QIT IL++ G++ +
Sbjct: 722 QITMEILMERLSGSDEL 738
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 68/149 (45%), Gaps = 8/149 (5%)
Query: 7 DLTYTLNIYQIMQNL---GLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLK 63
D T +Y+++ ++ G KPD +YN L+ + + M ++++ L
Sbjct: 558 DKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMRE----DGLD 613
Query: 64 LDVFTYSTIIKVFADAKLWQMALKVKHDM-RSAGVNLNTVAWSSLINACAHAGLVEQAIQ 122
V TY +I + ALK+ DM + VN NTV ++ LINA + G QA+
Sbjct: 614 PTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALS 673
Query: 123 LFEEMLLAGCEPNTQCFNIILHACVEACQ 151
L EEM + PN + +N + E Q
Sbjct: 674 LKEEMKMKMVRPNVETYNALFKCLNEKTQ 702
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 72/157 (45%), Gaps = 3/157 (1%)
Query: 6 RDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLD 65
+D + + M+ GL P +T+Y ++ A C G +D A ++K++ L S ++ +
Sbjct: 595 KDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDM-GLHS--KVNPN 651
Query: 66 VFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFE 125
Y+ +I F+ + AL +K +M+ V N +++L E ++L +
Sbjct: 652 TVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMD 711
Query: 126 EMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSW 162
EM+ CEPN I++ + + + +F +
Sbjct: 712 EMVEQSCEPNQITMEILMERLSGSDELVKLRKFMQGY 748
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 87/329 (26%), Positives = 148/329 (44%), Gaps = 20/329 (6%)
Query: 26 DMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFAD-AKLWQM 84
D+ +Y +L A G+ + A D+++ +K + L TY+ I+ VF + W+
Sbjct: 209 DVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTL----VTYNVILDVFGKMGRSWRK 264
Query: 85 ALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILH 144
L V +MRS G+ + S++++ACA GL+ +A + F E+ G EP T +N +L
Sbjct: 265 ILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQ 324
Query: 145 ACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSN--SQILSF 202
+A Y A + N YN + A V GFS + ++
Sbjct: 325 VFGKAGVYTEALSVLKEMEENSCPAD-SVTYNELV-------AAYVRAGFSKEAAGVIEM 376
Query: 203 TERFPFTPTTSTYNTLLKACGSDYYHAKAL--INEMKTVGLSPNQITWSILIDICGGTEN 260
+ P TY T++ A G +AL MK G PN T++ ++ + G
Sbjct: 377 MTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSR 436
Query: 261 VEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNT 320
I++L M G P+ + T + +C K ++ EMKSC P+ T+NT
Sbjct: 437 SNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNT 496
Query: 321 LLKARSKYGSVLEVQQCLAIYQDMQKAGY 349
L+ A + GS ++ + +Y +M +AG+
Sbjct: 497 LISAYGRCGSEVDASK---MYGEMTRAGF 522
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/338 (22%), Positives = 148/338 (43%), Gaps = 37/338 (10%)
Query: 18 MQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFA 77
M++ G P+ ++N +L C G +++E+K S G + D T++T+I +
Sbjct: 447 MKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMK---SCG-FEPDRDTFNTLISAYG 502
Query: 78 DAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQ 137
A K+ +M AG N +++L+NA A G + +M G +P
Sbjct: 503 RCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTET 562
Query: 138 CFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNA-----TTVPN 192
++++L KG LG E + +K+G I + T +
Sbjct: 563 SYSLMLQCYA---------------KGGNYLGI--ERIENRIKEGQIFPSWMLLRTLLLA 605
Query: 193 GF------SNSQILSFTERFPFTPTTSTYNTLLKACGSD--YYHAKALINEMKTVGLSPN 244
F + + + ++ + P +N++L + Y A+ ++ ++ GLSP+
Sbjct: 606 NFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPD 665
Query: 245 QITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYE 304
+T++ L+D+ A EILK++ + +KPD+++Y T IK ++A+ +
Sbjct: 666 LVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLS 725
Query: 305 EMKSCEIHPNWVTYNTLLKARSKYGSVLEVQ---QCLA 339
EM I P TYNT + + G E++ +C+A
Sbjct: 726 EMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMA 763
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 86/338 (25%), Positives = 147/338 (43%), Gaps = 33/338 (9%)
Query: 23 LKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLW 82
L+ D+ S L+K +G + A +++ L + G LKLD +++ +
Sbjct: 135 LRTDLVS---LVKGLDDSGHWERAVFLFEWLVLSSNSGALKLDHQVIEIFVRILGRESQY 191
Query: 83 QMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNII 142
+A K+ + L+ A++++++A + G E+AI LFE M G P +N+I
Sbjct: 192 SVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVI 251
Query: 143 LHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSF 202
L D + SW+ K+LG E + LK +TV + + +L
Sbjct: 252 L---------DVFGKMGRSWR--KILGVLDEMRSKGLKFDEF-TCSTVLSACAREGLLRE 299
Query: 203 TERF-------PFTPTTSTYNTLLKACGSD--YYHAKALINEMKTVGLSPNQITWSILID 253
+ F + P T TYN LL+ G Y A +++ EM+ + +T++ L+
Sbjct: 300 AKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVA 359
Query: 254 I---CGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCE 310
G ++ G IE+ M G+ P+ I YTT I ++ +AL L+ MK
Sbjct: 360 AYVRAGFSKEAAGVIEM---MTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAG 416
Query: 311 IHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAG 348
PN TYN +L S G + + + DM+ G
Sbjct: 417 CVPNTCTYNAVL---SLLGKKSRSNEMIKMLCDMKSNG 451
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 77/381 (20%), Positives = 165/381 (43%), Gaps = 57/381 (14%)
Query: 14 IYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTII 73
+ ++M G+ P+ +Y ++ A AG+ D A ++ +K V + TY+ ++
Sbjct: 373 VIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVP----NTCTYNAVL 428
Query: 74 KVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCE 133
+ +K+ DM+S G + N W++++ C + G+ + ++F EM G E
Sbjct: 429 SLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFE 488
Query: 134 PNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGE-GYNSNLKQ-GSIHNATTVP 191
P+ FN ++ A Y R +KM G G+N+ + ++ NA
Sbjct: 489 PDRDTFNTLISA------YGRCG---SEVDASKMYGEMTRAGFNACVTTYNALLNALARK 539
Query: 192 NGF-SNSQILSFTERFPFTPTTSTYNTLLK--ACGSDYYHAKALINEMKTV--------- 239
+ S ++S + F PT ++Y+ +L+ A G +Y + + N +K
Sbjct: 540 GDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLL 599
Query: 240 --------------------------GLSPNQITWSILIDICGGTENVEGAIEILKSMGD 273
G P+ + ++ ++ I + A IL+S+ +
Sbjct: 600 RTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIRE 659
Query: 274 AGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLE 333
G+ PD++ Y + + + V +A + + ++ ++ P+ V+YNT++K + G
Sbjct: 660 DGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGL--- 716
Query: 334 VQQCLAIYQDMQKAGYVRLCL 354
+Q+ + + +M + G +R C+
Sbjct: 717 MQEAVRMLSEMTERG-IRPCI 736
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/329 (21%), Positives = 133/329 (40%), Gaps = 24/329 (7%)
Query: 13 NIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTI 72
+++ M++ G +PD ++N L+ A G A MY E+ V TY+ +
Sbjct: 477 RVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTR----AGFNACVTTYNAL 532
Query: 73 IKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAG- 131
+ A W+ V DM+S G ++S ++ A G I+ E + G
Sbjct: 533 LNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNY-LGIERIENRIKEGQ 591
Query: 132 CEPNTQCFNIILHA---CVEACQYDRAFRFF--HSWKGNKMLGSFGEGYNSNLKQGSIHN 186
P+ +L A C +RAF F H +K + ++ +NS L + +N
Sbjct: 592 IFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVI------FNSMLSIFTRNN 645
Query: 187 ATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLK--ACGSDYYHAKALINEMKTVGLSPN 244
G IL +P TYN+L+ + + A+ ++ ++ L P+
Sbjct: 646 MYDQAEG-----ILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPD 700
Query: 245 QITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYE 304
++++ +I ++ A+ +L M + GI+P + Y T + F + + E
Sbjct: 701 LVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIE 760
Query: 305 EMKSCEIHPNWVTYNTLLKARSKYGSVLE 333
M + PN +T+ ++ + G E
Sbjct: 761 CMAKNDCRPNELTFKMVVDGYCRAGKYSE 789
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 69/150 (46%), Gaps = 4/150 (2%)
Query: 14 IYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTII 73
I + ++ GL PD+ +YN L+ G A+++ K L+ +LK D+ +Y+T+I
Sbjct: 653 ILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEK----SQLKPDLVSYNTVI 708
Query: 74 KVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCE 133
K F L Q A+++ +M G+ +++ ++ G+ + + E M C
Sbjct: 709 KGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCR 768
Query: 134 PNTQCFNIILHACVEACQYDRAFRFFHSWK 163
PN F +++ A +Y A F K
Sbjct: 769 PNELTFKMVVDGYCRAGKYSEAMDFVSKIK 798
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 115 bits (287), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 86/337 (25%), Positives = 153/337 (45%), Gaps = 24/337 (7%)
Query: 10 YTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTY 69
+ + + M++ G PD+ +YN+L+ C GR+D A K L + S G + +V T+
Sbjct: 257 HAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEA---IKFLNDMPSSG-CQPNVITH 312
Query: 70 STIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLL 129
+ I++ W A K+ DM G + + V ++ LIN GL+ +AI + E+M
Sbjct: 313 NIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQ 372
Query: 130 AGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGE--GYNSNL----KQGS 183
GC+PN+ +N +LH + + DRA + G + + YN+ L K G
Sbjct: 373 HGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSR---GCYPDIVTYNTMLTALCKDGK 429
Query: 184 IHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKA--LINEMKTVGL 241
+ +A + N S+ +P TYNT++ KA L++EM+ L
Sbjct: 430 VEDAVEILNQLSSKGC---------SPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDL 480
Query: 242 SPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALT 301
P+ IT+S L+ V+ AI+ GI+P+ + + + + +S+ +A+
Sbjct: 481 KPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAID 540
Query: 302 LYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCL 338
M + PN +Y L++ + G E + L
Sbjct: 541 FLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELL 577
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/341 (21%), Positives = 157/341 (46%), Gaps = 21/341 (6%)
Query: 13 NIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTI 72
N ++ + + PD+ +YN +L++ C +G++ A ++ + + DV TY+ +
Sbjct: 190 NALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYP----DVITYTIL 245
Query: 73 IKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGC 132
I+ A+K+ +MR G + V ++ L+N G +++AI+ +M +GC
Sbjct: 246 IEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGC 305
Query: 133 EPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPN 192
+PN NIIL + ++ A + +G++ ++ +I
Sbjct: 306 QPNVITHNIILRSMCSTGRWMDAEKLLADM--------LRKGFSPSVVTFNILINFLCRK 357
Query: 193 GFSNSQILSFTERFP---FTPTTSTYNTLLKACGSDYYHAKAL--INEMKTVGLSPNQIT 247
G I E+ P P + +YN LL + +A+ + M + G P+ +T
Sbjct: 358 GLLGRAI-DILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVT 416
Query: 248 WSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMK 307
++ ++ VE A+EIL + G P +I Y T I ++ +A+ L +EM+
Sbjct: 417 YNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMR 476
Query: 308 SCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAG 348
+ ++ P+ +TY++L+ S+ G +V + + + + ++ G
Sbjct: 477 AKDLKPDTITYSSLVGGLSREG---KVDEAIKFFHEFERMG 514
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/327 (23%), Positives = 144/327 (44%), Gaps = 50/327 (15%)
Query: 14 IYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTII 73
I +I++ G PD+ +YN+++ C AG ++ A + + + DV TY+TI+
Sbjct: 159 ILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMS-------VSPDVVTYNTIL 211
Query: 74 KVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCE 133
+ D+ + A++V M + + ++ LI A V A++L +EM GC
Sbjct: 212 RSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCT 271
Query: 134 PNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNG 193
P+ +N++++ + + D A +F +
Sbjct: 272 PDVVTYNVLVNGICKEGRLDEAIKFLNDMPS----------------------------- 302
Query: 194 FSNSQILSFTERFPFTPTTSTYNTLLKACGS--DYYHAKALINEMKTVGLSPNQITWSIL 251
S Q P T+N +L++ S + A+ L+ +M G SP+ +T++IL
Sbjct: 303 -SGCQ-----------PNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNIL 350
Query: 252 IDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEI 311
I+ + AI+IL+ M G +P+ ++Y + + K +A+ E M S
Sbjct: 351 INFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGC 410
Query: 312 HPNWVTYNTLLKARSKYGSVLEVQQCL 338
+P+ VTYNT+L A K G V + + L
Sbjct: 411 YPDIVTYNTMLTALCKDGKVEDAVEIL 437
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 111/259 (42%), Gaps = 26/259 (10%)
Query: 99 LNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRF 158
L V ++ + G +E+ + E M+ G P+ ++ + +A +
Sbjct: 100 LEDVESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKI 159
Query: 159 FHSWKGNKMLGSFGEGYNSNL------KQGSIHNATTVPNGFSNSQILSFTERFPFTPTT 212
+G+ G+ + N+ K G I+NA LS +R +P
Sbjct: 160 LEILEGS---GAVPDVITYNVMISGYCKAGEINNA------------LSVLDRMSVSPDV 204
Query: 213 STYNTLLKA-CGS-DYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKS 270
TYNT+L++ C S A +++ M P+ IT++ILI+ V A+++L
Sbjct: 205 VTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDE 264
Query: 271 MGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGS 330
M D G PDV+ Y + + +A+ +M S PN +T+N +L++ G
Sbjct: 265 MRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGR 324
Query: 331 VLEVQQCLAIYQDMQKAGY 349
++ ++ LA DM + G+
Sbjct: 325 WMDAEKLLA---DMLRKGF 340
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 113/271 (41%), Gaps = 47/271 (17%)
Query: 8 LTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVF 67
L ++I + M G +P+ SYN LL C ++D A + L+ + S G D+
Sbjct: 360 LGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRA---IEYLERMVSRGCYP-DIV 415
Query: 68 TYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEM 127
TY+T++ + A+++ + + S G + + ++++I+ A AG +AI+L +EM
Sbjct: 416 TYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEM 475
Query: 128 LLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNA 187
+P+T ++ ++ + D A +FFH +
Sbjct: 476 RAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEF------------------------- 510
Query: 188 TTVPNGFSNSQILSFTERFPFTPTTSTYNT-LLKACGSDYY-HAKALINEMKTVGLSPNQ 245
ER P T+N+ +L C S A + M G PN+
Sbjct: 511 ----------------ERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNE 554
Query: 246 ITWSILIDICGGTENVEGAIEILKSMGDAGI 276
+++ILI+ + A+E+L + + G+
Sbjct: 555 TSYTILIEGLAYEGMAKEALELLNELCNKGL 585
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/337 (24%), Positives = 163/337 (48%), Gaps = 17/337 (5%)
Query: 18 MQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFA 77
M +G KPD+ +YN ++ + C RV+ A D +KE+ E G ++ +V TY+ ++
Sbjct: 181 MVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEI---ERKG-IRPNVVTYTALVNGLC 236
Query: 78 DAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQ 137
++ W A ++ DM + N + +S+L++A G V +A +LFEEM+ +P+
Sbjct: 237 NSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIV 296
Query: 138 CFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNS 197
++ +++ + D A + F G + + N A V +G
Sbjct: 297 TYSSLINGLCLHDRIDEANQMFDLMVSK---GCLADVVSYNTLINGFCKAKRVEDGM--- 350
Query: 198 QILSFTERFPFTPTTSTYNTLLKAC--GSDYYHAKALINEMKTVGLSPNQITWSILID-I 254
++ + T TYNTL++ D A+ ++M G+SP+ T++IL+ +
Sbjct: 351 KLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGL 410
Query: 255 CGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPN 314
C E +E A+ I + M + D++ YTT I+ ++ ++A +L+ + + P+
Sbjct: 411 CDNGE-LEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPD 469
Query: 315 WVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYVR 351
VTY T++ G + EV+ A+Y M++ G ++
Sbjct: 470 IVTYTTMMSGLCTKGLLHEVE---ALYTKMKQEGLMK 503
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 143/321 (44%), Gaps = 26/321 (8%)
Query: 25 PDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQM 84
P + +N LL A + D+ + K+++ L ++ D++T++ +I F +
Sbjct: 83 PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLG----IRNDLYTFNIVINCFCCCFQVSL 138
Query: 85 ALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILH 144
AL + M G + V SL+N V A+ L ++M+ G +P+ +N I+
Sbjct: 139 ALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIID 198
Query: 145 ACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNS------- 197
+ + + + AF FF + +G N + T + NG NS
Sbjct: 199 SLCKTKRVNDAFDFFKEIER--------KGIRPN-----VVTYTALVNGLCNSSRWSDAA 245
Query: 198 QILSFTERFPFTPTTSTYNTLLKAC--GSDYYHAKALINEMKTVGLSPNQITWSILIDIC 255
++LS + TP TY+ LL A AK L EM + + P+ +T+S LI+
Sbjct: 246 RLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGL 305
Query: 256 GGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNW 315
+ ++ A ++ M G DV++Y T I ++K + + L+ EM + N
Sbjct: 306 CLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNT 365
Query: 316 VTYNTLLKARSKYGSVLEVQQ 336
VTYNTL++ + G V + Q+
Sbjct: 366 VTYNTLIQGFFQAGDVDKAQE 386
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 122/273 (44%), Gaps = 26/273 (9%)
Query: 14 IYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTII 73
+++ M + + PD+ +Y+ L+ C+ R+D A M+ + S G L DV +Y+T+I
Sbjct: 282 LFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFD---LMVSKGCLA-DVVSYNTLI 337
Query: 74 KVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCE 133
F AK + +K+ +M G+ NTV +++LI AG V++A + F +M G
Sbjct: 338 NGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGIS 397
Query: 134 PNTQCFNIILHACVEACQYDRAFRFFHSWKGNKM---LGSFGEGYNSNLKQGSIHNATTV 190
P+ +NI+L + + ++A F + +M + ++ K G + A ++
Sbjct: 398 PDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSL 457
Query: 191 PNGFSNSQILSFTERFPFTPTTSTYNTLLKA-CGSDYYH-AKALINEMKTVGLSPNQITW 248
S + P TY T++ C H +AL +MK GL N T
Sbjct: 458 FCSLSLKGL---------KPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTL 508
Query: 249 SILIDICGGTENVEGAIEILKSMGDAGIKPDVI 281
S ++ + E++K M G P ++
Sbjct: 509 S--------DGDITLSAELIKKMLSCGYAPSLL 533
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 107/234 (45%), Gaps = 15/234 (6%)
Query: 117 VEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKM--LGSFGEG 174
+ AI LF +M+ + P+ FN +L A V+ +YD G KM LG +
Sbjct: 66 LNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISL-----GKKMEVLGIRNDL 120
Query: 175 YNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKA-CGSDYY-HAKAL 232
Y N+ V S IL + + P T +L+ C + A +L
Sbjct: 121 YTFNIVINCFCCCFQVSLALS---ILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSL 177
Query: 233 INEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVE 292
+++M +G P+ + ++ +ID T+ V A + K + GI+P+V+ YT +
Sbjct: 178 VDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCN 237
Query: 293 SKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQK 346
S + A L +M +I PN +TY+ LL A K G VLE ++ ++++M +
Sbjct: 238 SSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKE---LFEEMVR 288
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 67/134 (50%), Gaps = 4/134 (2%)
Query: 12 LNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYST 71
+ +++ M GL + +YN L++ AG VD AQ+ + ++ + D++TY+
Sbjct: 350 MKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFG----ISPDIWTYNI 405
Query: 72 IIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAG 131
++ D + AL + DM+ ++L+ V ++++I G VE+A LF + L G
Sbjct: 406 LLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKG 465
Query: 132 CEPNTQCFNIILHA 145
+P+ + ++
Sbjct: 466 LKPDIVTYTTMMSG 479
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 147/309 (47%), Gaps = 20/309 (6%)
Query: 23 LKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLW 82
L P M+++N+L+ C + ++ A+ + L+ ++ G + D Y+T+I A +
Sbjct: 463 LNPTMSTFNMLMSVCASSQDIEGARGV---LRLVQESG-MTADCKLYTTLISSCAKSGKV 518
Query: 83 QMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNII 142
+V H M ++GV N + +LI+ CA AG V +A + + +P+ FN +
Sbjct: 519 DAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNAL 578
Query: 143 LHACVEACQYDRAFRFFHSWKG-----NKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNS 197
+ AC ++ DRAF K + S G + G + A
Sbjct: 579 ISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERA---------K 629
Query: 198 QILSFTERFPFTPTTSTYNTLLKACG--SDYYHAKALINEMKTVGLSPNQITWSILIDIC 255
++ ++ T Y + +C D+ A ++ +MK ++P+++ +S LID+
Sbjct: 630 EVYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVA 689
Query: 256 GGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNW 315
G + ++ A IL+ GI+ I+Y++ + C +K++K+AL LYE++KS ++ P
Sbjct: 690 GHAKMLDEAFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTI 749
Query: 316 VTYNTLLKA 324
T N L+ A
Sbjct: 750 STMNALITA 758
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 120/279 (43%), Gaps = 49/279 (17%)
Query: 23 LKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLW 82
+ PD S L+KACC AG+V+ A+++Y+ + G ++ Y+ + + + W
Sbjct: 605 IDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTPEV----YTIAVNSCSKSGDW 660
Query: 83 QMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNII 142
A + DM+ V + V +S+LI+ HA ++++A + ++ G T ++ +
Sbjct: 661 DFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSL 720
Query: 143 LHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSF 202
+ AC A + +A + K K+
Sbjct: 721 MGACCNAKDWKKALELYEKIKSIKL----------------------------------- 745
Query: 203 TERFPFTPTTSTYNTLLKAC--GSDYYHAKALINEMKTVGLSPNQITWSILIDICGGTEN 260
PT ST N L+ A G+ A ++E+KT+GL PN IT+S+L+ ++
Sbjct: 746 ------RPTISTMNALITALCEGNQLPKAMEYLDEIKTLGLKPNTITYSMLMLASERKDD 799
Query: 261 VEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQA 299
E + ++L G+ P++I +C + F++A
Sbjct: 800 FEVSFKLLSQAKGDGVSPNLIMCRCITSLC--KRRFEKA 836
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/347 (21%), Positives = 146/347 (42%), Gaps = 39/347 (11%)
Query: 4 NSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLK 63
+S+D+ + +++Q G+ D Y L+ +C +G+VD M++ + + G ++
Sbjct: 479 SSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDA---MFEVFHQMSNSG-VE 534
Query: 64 LDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQL 123
++ T+ +I A A A +RS V + V +++LI+AC +G V++A +
Sbjct: 535 ANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISACGQSGAVDRAFDV 594
Query: 124 FEEMLLA--GCEPNTQCFNIILHACVEACQYDRA---FRFFHSWKGNKMLGSFGEGYNSN 178
EM +P+ ++ AC A Q +RA ++ H + + NS
Sbjct: 595 LAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTPEVYTIAVNSC 654
Query: 179 LKQGS----------IHNATTVPNGFSNSQILS-------FTERFPFTPT---------T 212
K G + P+ S ++ E F T
Sbjct: 655 SKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQDAKSQGIRLGT 714
Query: 213 STYNTLLKAC--GSDYYHAKALINEMKTVGLSPNQITWSILID-ICGGTENVEGAIEILK 269
+Y++L+ AC D+ A L ++K++ L P T + LI +C G + + A+E L
Sbjct: 715 ISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALITALCEGNQ-LPKAMEYLD 773
Query: 270 SMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWV 316
+ G+KP+ I Y+ + +F+ + L + K + PN +
Sbjct: 774 EIKTLGLKPNTITYSMLMLASERKDDFEVSFKLLSQAKGDGVSPNLI 820
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/175 (20%), Positives = 74/175 (42%), Gaps = 10/175 (5%)
Query: 157 RFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYN 216
R F N + YN L+ G I + ++ +L + + +
Sbjct: 389 RNFELHNSNGRSPETSDAYNRLLRDGRIKDCISLLEDLDQRDLLDMDKIY--------HA 440
Query: 217 TLLKACGSDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGI 276
+ KAC +A + L+P T+++L+ +C ++++EGA +L+ + ++G+
Sbjct: 441 SFFKACKKQRAVKEAF--RFTKLILNPTMSTFNMLMSVCASSQDIEGARGVLRLVQESGM 498
Query: 277 KPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSV 331
D YTT I C +S ++ +M + + N T+ L+ ++ G V
Sbjct: 499 TADCKLYTTLISSCAKSGKVDAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQV 553
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 83/331 (25%), Positives = 144/331 (43%), Gaps = 46/331 (13%)
Query: 6 RDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLD 65
+DL ++ M G + + +Y L+ CVA R+D A D++ ++K E ++
Sbjct: 267 KDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVR-- 324
Query: 66 VFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFE 125
TY+ +IK ++ AL + +M G+ N ++ LI++ E+A +L
Sbjct: 325 --TYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLG 382
Query: 126 EMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIH 185
+ML G PN +N ++ N K+G I
Sbjct: 383 QMLEKGLMPNVITYNALI--------------------------------NGYCKRGMIE 410
Query: 186 NATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKA-CGSDYYHAKALINEMKTVGLSPN 244
+A V + E +P T TYN L+K C S+ + A ++N+M + P+
Sbjct: 411 DAVDV---------VELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPD 461
Query: 245 QITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYE 304
+T++ LID + N + A +L M D G+ PD YT+ I +SK ++A L++
Sbjct: 462 VVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFD 521
Query: 305 EMKSCEIHPNWVTYNTLLKARSKYGSVLEVQ 335
++ ++PN V Y L+ K G V E
Sbjct: 522 SLEQKGVNPNVVMYTALIDGYCKAGKVDEAH 552
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 78/331 (23%), Positives = 150/331 (45%), Gaps = 48/331 (14%)
Query: 5 SRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKL 64
+R + ++++ M++ P + +Y +L+K+ C + R A ++ KE +E G +K
Sbjct: 301 ARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKE---MEETG-IKP 356
Query: 65 DVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLF 124
++ TY+ +I ++ A ++ M G+ N + +++LIN G++E A+ +
Sbjct: 357 NIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVV 416
Query: 125 EEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSI 184
E M PNT+ +N ++ +GY + ++
Sbjct: 417 ELMESRKLSPNTRTYNELI-----------------------------KGYC----KSNV 443
Query: 185 HNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKA-CGS-DYYHAKALINEMKTVGLS 242
H A V N ++L P TYN+L+ C S ++ A L++ M GL
Sbjct: 444 HKAMGVLNKMLERKVL---------PDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLV 494
Query: 243 PNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTL 302
P+Q T++ +ID ++ VE A ++ S+ G+ P+V+ YT I ++ +A +
Sbjct: 495 PDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLM 554
Query: 303 YEEMKSCEIHPNWVTYNTLLKARSKYGSVLE 333
E+M S PN +T+N L+ G + E
Sbjct: 555 LEKMLSKNCLPNSLTFNALIHGLCADGKLKE 585
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 128/300 (42%), Gaps = 47/300 (15%)
Query: 30 YNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVK 89
YN LL + G VD + +Y E+ LE ++ +++TY+ ++ + + A +
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEM--LED--KVCPNIYTYNKMVNGYCKLGNVEEANQYV 241
Query: 90 HDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEA 149
+ AG++ + ++SLI ++ A ++F EM L GC N + ++H A
Sbjct: 242 SKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVA 301
Query: 150 CQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFT 209
+ D A F K ++
Sbjct: 302 RRIDEAMDLFVKMKDDECF----------------------------------------- 320
Query: 210 PTTSTYNTLLKA-CGSDYY-HAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEI 267
PT TY L+K+ CGS+ A L+ EM+ G+ PN T+++LID E A E+
Sbjct: 321 PTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKAREL 380
Query: 268 LKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSK 327
L M + G+ P+VI Y I + + A+ + E M+S ++ PN TYN L+K K
Sbjct: 381 LGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK 440
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 80/377 (21%), Positives = 151/377 (40%), Gaps = 57/377 (15%)
Query: 12 LNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYST 71
LN+ + M+ G+KP++ +Y +L+ + C + + A+++ ++ LE L +V TY+
Sbjct: 343 LNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQM--LEK--GLMPNVITYNA 398
Query: 72 IIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAG 131
+I + + + A+ V M S ++ NT ++ LI + V +A+ + +ML
Sbjct: 399 LINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERK 457
Query: 132 CEPNTQCFNIILHACVEACQYDRAFRFF----------HSWKGNKMLGSF---------- 171
P+ +N ++ + +D A+R W M+ S
Sbjct: 458 VLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEAC 517
Query: 172 -------GEGYNSNL-----------KQGSIHNATTVPNGFSNSQILSFTERFPFTPTTS 213
+G N N+ K G + A + + L P +
Sbjct: 518 DLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCL---------PNSL 568
Query: 214 TYNTLLKACGSD--YYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSM 271
T+N L+ +D A L +M +GL P T +ILI + + A + M
Sbjct: 569 TFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQM 628
Query: 272 GDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSV 331
+G KPD YTT I+ A + +M+ + P+ TY++L+K YG +
Sbjct: 629 LSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKG---YGDL 685
Query: 332 LEVQQCLAIYQDMQKAG 348
+ + + M+ G
Sbjct: 686 GQTNFAFDVLKRMRDTG 702
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/307 (20%), Positives = 118/307 (38%), Gaps = 39/307 (12%)
Query: 7 DLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDV 66
D + + +Q M + G KPD +Y ++ C GR+ A+DM +++ + D+
Sbjct: 617 DFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRE----NGVSPDL 672
Query: 67 FTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLI----------------NA 110
FTYS++IK + D A V MR G + + SLI
Sbjct: 673 FTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPEL 732
Query: 111 CAHAGLVE--QAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKML 168
CA + ++E ++L E+M+ PN + + ++ E A + F + N+ +
Sbjct: 733 CAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGI 792
Query: 169 GSFGEGYNSNLK---QGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACG-- 223
+N+ L + HN ++++ P + L+ CG
Sbjct: 793 SPSELVFNALLSCCCKLKKHNEA--------AKVVDDMICVGHLPQLESCKVLI--CGLY 842
Query: 224 --SDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVI 281
+ ++ + G +++ W I+ID G VE E+ M G K
Sbjct: 843 KKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQ 902
Query: 282 AYTTAIK 288
Y+ I+
Sbjct: 903 TYSLLIE 909
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 111 bits (277), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 89/349 (25%), Positives = 161/349 (46%), Gaps = 19/349 (5%)
Query: 12 LNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYST 71
++ + M G PD ++Y+ +L C A +++LA +++E+K G L DV+TY+
Sbjct: 468 FSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKR----GGLVADVYTYTI 523
Query: 72 IIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAG 131
++ F A L + A K ++MR G N V +++LI+A A V A +LFE ML G
Sbjct: 524 MVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEG 583
Query: 132 CEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGS---FGEGYNSNLKQGSIHNAT 188
C PN ++ ++ +A Q ++A + F G+K + + + Y+ N ++ ++
Sbjct: 584 CLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYG 643
Query: 189 TVPNGFSNS-------QILSFTERFPFTPTTSTYNTLLKA-CG-SDYYHAKALINEMKTV 239
+ +GF S ++L P Y+ L+ C A+ + EM
Sbjct: 644 ALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEH 703
Query: 240 GLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQA 299
G T+S LID + + A ++L M + P+V+ YT I + +A
Sbjct: 704 GFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEA 763
Query: 300 LTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAG 348
L + M+ PN VTY ++ +G + +++ CL + + M G
Sbjct: 764 YKLMQMMEEKGCQPNVVTYTAMIDG---FGMIGKIETCLELLERMGSKG 809
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 92/374 (24%), Positives = 146/374 (39%), Gaps = 43/374 (11%)
Query: 3 VNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRL 62
+N + L + +M G P +N L+ A C +G A YK LK + G +
Sbjct: 348 LNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYA---YKLLKKMVKCGHM 404
Query: 63 KLDVFTYSTIIKVFADAK------LWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGL 116
V Y+ +I K L +A K +M +AGV LN + SS AG
Sbjct: 405 PGYV-VYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGK 463
Query: 117 VEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLG---SFGE 173
E+A + EM+ G P+T ++ +L+ A + + AF F K ++ ++
Sbjct: 464 YEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTI 523
Query: 174 GYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKAC--GSDYYHAKA 231
+S K G I A N TP TY L+ A +A
Sbjct: 524 MVDSFCKAGLIEQARKWFNEMREVGC---------TPNVVTYTALIHAYLKAKKVSYANE 574
Query: 232 LINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSM----------------GDAG 275
L M + G PN +T+S LID VE A +I + M D
Sbjct: 575 LFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNS 634
Query: 276 IKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQ 335
+P+V+ Y + +S ++A L + M PN + Y+ L+ K G + E Q
Sbjct: 635 ERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQ 694
Query: 336 QCLAIYQDMQKAGY 349
+ + +M + G+
Sbjct: 695 E---VKTEMSEHGF 705
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 84/373 (22%), Positives = 146/373 (39%), Gaps = 77/373 (20%)
Query: 4 NSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLK 63
N+ + +++ M+ GL D+ +Y I++ + C AG ++ A+ + E++ +
Sbjct: 495 NASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTP--- 551
Query: 64 LDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQL 123
+V TY+ +I + AK A ++ M S G N V +S+LI+ AG VE+A Q+
Sbjct: 552 -NVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQI 610
Query: 124 FEEML---------------------------------------------------LAGC 132
FE M + GC
Sbjct: 611 FERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGC 670
Query: 133 EPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGE-GYNSNLKQGS--IHNATT 189
EPN ++ ++ + + D A ++ E G+ + L S I
Sbjct: 671 EPNQIVYDALIDGLCKVGKLDEA---------QEVKTEMSEHGFPATLYTYSSLIDRYFK 721
Query: 190 VPNGFSNSQILSFTERFPFTPTTSTYNTLL----KACGSDYYHAKALINEMKTVGLSPNQ 245
V S++LS P Y ++ K +D A L+ M+ G PN
Sbjct: 722 VKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTD--EAYKLMQMMEEKGCQPNV 779
Query: 246 ITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEE 305
+T++ +ID G +E +E+L+ MG G+ P+ + Y I C ++ A L EE
Sbjct: 780 VTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEE 839
Query: 306 MKSCEIHPNWVTY 318
MK +W T+
Sbjct: 840 MK----QTHWPTH 848
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/339 (21%), Positives = 139/339 (41%), Gaps = 24/339 (7%)
Query: 18 MQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFA 77
+++ +P ++YN L++A A R+D A +++E+ S+ L++D FT
Sbjct: 226 LKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREM----SLANLRMDGFTLRCFAYSLC 281
Query: 78 DAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQ 137
W+ AL + + + +TV ++ LI+ A L E+A+ M C PN
Sbjct: 282 KVGKWREALTL---VETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVV 338
Query: 138 CFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNS 197
++ +L C+ Q R R + M+ G + + +H T +
Sbjct: 339 TYSTLLCGCLNKKQLGRCKRVLN------MMMMEGCYPSPKIFNSLVHAYCTSGDHSYAY 392
Query: 198 QILSFTERFPFTPTTSTYNTLLKA-CGS-DYYH------AKALINEMKTVGLSPNQITWS 249
++L + P YN L+ + CG D + A+ +EM G+ N+I S
Sbjct: 393 KLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVS 452
Query: 250 ILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSC 309
E A +++ M G PD Y+ + + + A L+EEMK
Sbjct: 453 SFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRG 512
Query: 310 EIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAG 348
+ + TY ++ + K G ++Q + +M++ G
Sbjct: 513 GLVADVYTYTIMVDSFCKAGL---IEQARKWFNEMREVG 548
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 73/159 (45%), Gaps = 31/159 (19%)
Query: 12 LNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKH---------------- 55
L + + M + G+ P+ +Y +L+ CC G +D+A ++ +E+K
Sbjct: 799 LELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEG 858
Query: 56 -----LESVGRL----KLDVFTYSTIIKVFAD----AKLWQMALKVKHDMRSAGVNL--N 100
+ES+G L + D + ++ ++ D A+ +MAL++ ++ + L
Sbjct: 859 FNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDY 918
Query: 101 TVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCF 139
+ ++SLI + A VE A QLF EM G P Q F
Sbjct: 919 SSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSF 957
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/344 (24%), Positives = 157/344 (45%), Gaps = 29/344 (8%)
Query: 14 IYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTII 73
I + M + G PD+ +Y +L+ A C A ++D A+++++++K GR K D TY T++
Sbjct: 280 ILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMK----TGRHKPDRVTYITLL 335
Query: 74 KVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCE 133
F+D + + +M G + V ++ L++A AG +A + M G
Sbjct: 336 DRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGIL 395
Query: 134 PNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNG 193
PN +N ++ + + D A F GN + S G +K + +
Sbjct: 396 PNLHTYNTLICGLLRVHRLDDALELF----GN--MESLG------VKPTAYTYIVFIDYY 443
Query: 194 FSNSQILSFTERFPFTPTTSTYNTLLKACGSDYY---------HAKALINEMKTVGLSPN 244
+ +S E F T ++ AC + Y AK + +K +GL P+
Sbjct: 444 GKSGDSVSALETFEKMKTKGIAPNIV-ACNASLYSLAKAGRDREAKQIFYGLKDIGLVPD 502
Query: 245 QITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYE 304
+T+++++ ++ AI++L M + G +PDVI + I ++ +A ++
Sbjct: 503 SVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFM 562
Query: 305 EMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAG 348
MK ++ P VTYNTLL K G ++Q+ + +++ M + G
Sbjct: 563 RMKEMKLKPTVVTYNTLLAGLGKNG---KIQEAIELFEGMVQKG 603
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 137/288 (47%), Gaps = 19/288 (6%)
Query: 68 TYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEM 127
TY+ +I +A + ++A V ++S G + ++ L++A +G +++ +L++EM
Sbjct: 787 TYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEM 846
Query: 128 LLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLG----SFGEGYNSNLKQGS 183
CE NT NI++ V+A D A ++ ++ ++G + K G
Sbjct: 847 STHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGR 906
Query: 184 IHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACG--SDYYHAKALINEMKTVGL 241
++ A + G +L + R P + YN L+ G + A AL M G+
Sbjct: 907 LYEAKQLFEG-----MLDYGCR----PNCAIYNILINGFGKAGEADAACALFKRMVKEGV 957
Query: 242 SPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALT 301
P+ T+S+L+D V+ + K + ++G+ PDV+ Y I +S ++AL
Sbjct: 958 RPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALV 1017
Query: 302 LYEEMKSCE-IHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAG 348
L+ EMK+ I P+ TYN+L+ G V E + IY ++Q+AG
Sbjct: 1018 LFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGK---IYNEIQRAG 1062
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 143/315 (45%), Gaps = 18/315 (5%)
Query: 13 NIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTI 72
+++ +++ G PD+ +YN LL A +G++D ++YKE+ S + + T++ +
Sbjct: 806 DVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEM----STHECEANTITHNIV 861
Query: 73 IKVFADAKLWQMALKVKHD-MRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAG 131
I A AL + +D M + + LI+ + +G + +A QLFE ML G
Sbjct: 862 ISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYG 921
Query: 132 CEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVP 191
C PN +NI+++ +A + D A F EG +LK S+
Sbjct: 922 CRPNCAIYNILINGFGKAGEADAACALFKRM--------VKEGVRPDLKTYSVLVDCLCM 973
Query: 192 NGFSNSQILSFTE--RFPFTPTTSTYNTLLKACGSDYYHAKALI--NEMKTV-GLSPNQI 246
G + + F E P YN ++ G + +AL+ NEMKT G++P+
Sbjct: 974 VGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLY 1033
Query: 247 TWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEM 306
T++ LI G VE A +I + AG++P+V + I+ S + A +Y+ M
Sbjct: 1034 TYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTM 1093
Query: 307 KSCEIHPNWVTYNTL 321
+ PN TY L
Sbjct: 1094 VTGGFSPNTGTYEQL 1108
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/353 (23%), Positives = 163/353 (46%), Gaps = 25/353 (7%)
Query: 3 VNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRL 62
+ SR T + +Y+ M G +P + +Y+ L+ + R D+ M LK +E++G L
Sbjct: 199 LKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVG--LGKRRDIDSVM-GLLKEMETLG-L 254
Query: 63 KLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQ 122
K +V+T++ I+V A A ++ M G + V ++ LI+A A ++ A +
Sbjct: 255 KPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKE 314
Query: 123 LFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLG---SFGEGYNSNL 179
+FE+M +P+ + +L + D +F+ + + + +F ++
Sbjct: 315 VFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALC 374
Query: 180 KQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYH----AKALINE 235
K G+ A + + IL P TYNTL+ CG H A L
Sbjct: 375 KAGNFGEAFDTLDVMRDQGIL---------PNLHTYNTLI--CGLLRVHRLDDALELFGN 423
Query: 236 MKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKN 295
M+++G+ P T+ + ID G + + A+E + M GI P+++A ++ ++
Sbjct: 424 MESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGR 483
Query: 296 FKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAG 348
++A ++ +K + P+ VTYN ++K SK G E+ + + + +M + G
Sbjct: 484 DREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVG---EIDEAIKLLSEMMENG 533
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 76/145 (52%), Gaps = 5/145 (3%)
Query: 208 FTPTTSTYNTLLKACGS--DYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAI 265
F P+ TY++L+ G D L+ EM+T+GL PN T++I I + G + A
Sbjct: 219 FRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAY 278
Query: 266 EILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKAR 325
EILK M D G PDV+ YT I ++ A ++E+MK+ P+ VTY TLL
Sbjct: 279 EILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRF 338
Query: 326 SKYGSVLEVQQCLAIYQDMQKAGYV 350
S + V+Q + +M+K G+V
Sbjct: 339 SDNRDLDSVKQ---FWSEMEKDGHV 360
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 75/337 (22%), Positives = 134/337 (39%), Gaps = 15/337 (4%)
Query: 14 IYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTII 73
++ +MQ +K D +Y + K+ V G + A ++++ V L+ ++Y+ +I
Sbjct: 140 VFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFV----LNAYSYNGLI 195
Query: 74 KVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCE 133
+ ++ A++V M G + +SSL+ ++ + L +EM G +
Sbjct: 196 HLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLK 255
Query: 134 PNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNG 193
PN F I + A + + A+ K + G G + I T
Sbjct: 256 PNVYTFTICIRVLGRAGKINEAYEIL------KRMDDEGCGPDVVTYTVLIDALCTARKL 309
Query: 194 FSNSQILSFTERFPFTPTTSTYNTLLK--ACGSDYYHAKALINEMKTVGLSPNQITWSIL 251
++ + P TY TLL + D K +EM+ G P+ +T++IL
Sbjct: 310 DCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTIL 369
Query: 252 IDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEI 311
+D N A + L M D GI P++ Y T I + AL L+ M+S +
Sbjct: 370 VDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGV 429
Query: 312 HPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAG 348
P TY + K G + L ++ M+ G
Sbjct: 430 KPTAYTYIVFIDYYGKSGDSV---SALETFEKMKTKG 463
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/330 (19%), Positives = 126/330 (38%), Gaps = 47/330 (14%)
Query: 16 QIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKV 75
+ NL L + N +L+A V G+++ ++ ++ +K D TY TI K
Sbjct: 107 SVAGNLNLVHTTETCNYMLEALRVDGKLEEMAYVFDLMQKR----IIKRDTNTYLTIFKS 162
Query: 76 FADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPN 135
+ + A MR G LN +++ LI+ + +A++++ M+L G P+
Sbjct: 163 LSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPS 222
Query: 136 TQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFS 195
Q ++ ++ G G ++ S
Sbjct: 223 LQTYSSLM---------------------------VGLGKRRDID--------------S 241
Query: 196 NSQILSFTERFPFTPTTSTYNTLLKACG--SDYYHAKALINEMKTVGLSPNQITWSILID 253
+L E P T+ ++ G A ++ M G P+ +T+++LID
Sbjct: 242 VMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLID 301
Query: 254 ICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHP 313
++ A E+ + M KPD + Y T + ++++ + EM+ P
Sbjct: 302 ALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVP 361
Query: 314 NWVTYNTLLKARSKYGSVLEVQQCLAIYQD 343
+ VT+ L+ A K G+ E L + +D
Sbjct: 362 DVVTFTILVDALCKAGNFGEAFDTLDVMRD 391
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 93/375 (24%), Positives = 170/375 (45%), Gaps = 40/375 (10%)
Query: 3 VNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRV-DLAQDMYKELKHLESVGR 61
+ SRD + ++Y ++ G K D+ +YN+LL A + + +DM K +H
Sbjct: 214 LRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDALAKDEKACQVFEDMKK--RHC----- 266
Query: 62 LKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAI 121
+ D +TY+ +I+ A+ + ++M + G+ LN V +++L+ A +V++AI
Sbjct: 267 -RRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAI 325
Query: 122 QLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQ 181
Q+F M+ GC PN ++++L+ V Q R K G + + K
Sbjct: 326 QVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISKRYMTQGIYSYLVRTLSKL 385
Query: 182 GSIHNAT-------TVP-NGFSNS------------------QILSFTERFPFTPTTSTY 215
G + A + P G +S ++LS T Y
Sbjct: 386 GHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMY 445
Query: 216 NTLLKACG--SDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGD 273
NT+ A G H L +MK G SP+ T++ILI G V+ AI I + +
Sbjct: 446 NTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELER 505
Query: 274 AGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLE 333
+ KPD+I+Y + I ++ + +A ++EM+ ++P+ VTY+TL++ +G
Sbjct: 506 SDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMEC---FGKTER 562
Query: 334 VQQCLAIYQDMQKAG 348
V+ +++++M G
Sbjct: 563 VEMAYSLFEEMLVKG 577
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/320 (22%), Positives = 135/320 (42%), Gaps = 21/320 (6%)
Query: 12 LNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFT--- 68
+ ++ M G +P+ +Y++LL G +L L+ V + T
Sbjct: 325 IQVFSRMVETGCRPNEYTYSLLLNLLVAEG----------QLVRLDGVVEISKRYMTQGI 374
Query: 69 YSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEML 128
YS +++ + A ++ DM S V ++ S++ + AG +AI++ ++
Sbjct: 375 YSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIH 434
Query: 129 LAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNAT 188
G +T +N + A + Q F K + G + + N+ S
Sbjct: 435 EKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKD---GPSPDIFTYNILIASFGRVG 491
Query: 189 TVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGS--DYYHAKALINEMKTVGLSPNQI 246
V + I ER P +YN+L+ G D A EM+ GL+P+ +
Sbjct: 492 EVDEAIN---IFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVV 548
Query: 247 TWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEM 306
T+S L++ G TE VE A + + M G +P+++ Y + ++ +A+ LY +M
Sbjct: 549 TYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKM 608
Query: 307 KSCEIHPNWVTYNTLLKARS 326
K + P+ +TY L + +S
Sbjct: 609 KQQGLTPDSITYTVLERLQS 628
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/341 (25%), Positives = 154/341 (45%), Gaps = 23/341 (6%)
Query: 14 IYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTII 73
+++ ++ G+KP +YN LLK G + A+ M E+ E G + D TYS +I
Sbjct: 326 LFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEM---EKRG-VSPDEHTYSLLI 381
Query: 74 KVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCE 133
+ +A W+ A V +M + V N+ +S L+ G ++ Q+ +EM G +
Sbjct: 382 DAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVK 441
Query: 134 PNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEG----YNSNLKQGSIHNATT 189
P+ Q +N+++ + D A F ++ML E +N+ + H
Sbjct: 442 PDRQFYNVVIDTFGKFNCLDHAMTTF-----DRMLSEGIEPDRVTWNTLIDCHCKHGRHI 496
Query: 190 VPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSD--YYHAKALINEMKTVGLSPNQIT 247
V ++ ER P +TYN ++ + G + K L+ +MK+ G+ PN +T
Sbjct: 497 VAE-----EMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVT 551
Query: 248 WSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMK 307
+ L+D+ G + AIE L+ M G+KP Y I + +QA+ + M
Sbjct: 552 HTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMT 611
Query: 308 SCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAG 348
S + P+ + N+L+ A +G + A+ Q M++ G
Sbjct: 612 SDGLKPSLLALNSLINA---FGEDRRDAEAFAVLQYMKENG 649
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 156/343 (45%), Gaps = 35/343 (10%)
Query: 18 MQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFA 77
M+ G+ PD +Y++L+ A AGR + A+ + KE++ G ++ + F +S ++ F
Sbjct: 365 MEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEME----AGDVQPNSFVFSRLLAGFR 420
Query: 78 DAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQ 137
D WQ +V +M+S GV + ++ +I+ ++ A+ F+ ML G EP+
Sbjct: 421 DRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRV 480
Query: 138 CFNIILHACVEACQYDRAFRFFHSWKG----------NKMLGSFGEGYNSNLKQGSIHNA 187
+N ++ + ++ A F + + N M+ S+G+ Q +
Sbjct: 481 TWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGD-------QERWDDM 533
Query: 188 TTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKAL--INEMKTVGLSPNQ 245
+ + IL P T+ TL+ G A+ + EMK+VGL P+
Sbjct: 534 KRLLGKMKSQGIL---------PNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSS 584
Query: 246 ITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEE 305
++ LI+ E A+ + M G+KP ++A + I E + +A + +
Sbjct: 585 TMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQY 644
Query: 306 MKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAG 348
MK + P+ VTY TL+KA + V + Q+ +Y++M +G
Sbjct: 645 MKENGVKPDVVTYTTLMKALIR---VDKFQKVPVVYEEMIMSG 684
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/346 (23%), Positives = 158/346 (45%), Gaps = 52/346 (15%)
Query: 7 DLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVD--LAQDMYKELKHLESVGRLKL 64
D+ LN+ M+ G + D +Y++++++ + ++D + +YKE++ +L+L
Sbjct: 212 DIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIER----DKLEL 267
Query: 65 DVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLF 124
DV + II FA + AL++ ++ G++ T S+I+A A +G +A LF
Sbjct: 268 DVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALF 327
Query: 125 EEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSI 184
EE+ +G +P T+ +N +L +GY +K G +
Sbjct: 328 EELRQSGIKPRTRAYNALL-----------------------------KGY---VKTGPL 355
Query: 185 HNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKAC--GSDYYHAKALINEMKTVGLS 242
+A + ++S E+ +P TY+ L+ A + A+ ++ EM+ +
Sbjct: 356 KDAES---------MVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQ 406
Query: 243 PNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTL 302
PN +S L+ + ++LK M G+KPD Y I + A+T
Sbjct: 407 PNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTT 466
Query: 303 YEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAG 348
++ M S I P+ VT+NTL+ K+G + ++ +++ M++ G
Sbjct: 467 FDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEE---MFEAMERRG 509
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 69/138 (50%), Gaps = 4/138 (2%)
Query: 18 MQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFA 77
M+++GLKP T YN L+ A G L++ + + S G LK + +++I F
Sbjct: 575 MKSVGLKPSSTMYNALINAYAQRG---LSEQAVNAFRVMTSDG-LKPSLLALNSLINAFG 630
Query: 78 DAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQ 137
+ + A V M+ GV + V +++L+ A ++ ++EEM+++GC+P+ +
Sbjct: 631 EDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCKPDRK 690
Query: 138 CFNIILHACVEACQYDRA 155
+++ A Q RA
Sbjct: 691 ARSMLRSALRYMKQTLRA 708
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/353 (23%), Positives = 158/353 (44%), Gaps = 31/353 (8%)
Query: 3 VNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRL 62
NS +N+++ M+ G KP + +YN++L V G++ + L +
Sbjct: 219 ANSGRYREAVNVFKKMEEDGCKPTLITYNVILN---VFGKMGTPWNKITSLVEKMKSDGI 275
Query: 63 KLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQ 122
D +TY+T+I L Q A +V +M++AG + + V +++L++ + ++A++
Sbjct: 276 APDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMK 335
Query: 123 LFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFH--SWKGNK--------MLGSFG 172
+ EM+L G P+ +N ++ A D A + + KG K +L F
Sbjct: 336 VLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFE 395
Query: 173 EGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGS--DYYHAK 230
+ G + +A ++ N+ P T+N +K G+ +
Sbjct: 396 -------RAGKVESAMSIFEEMRNAGC---------KPNICTFNAFIKMYGNRGKFTEMM 439
Query: 231 ALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVC 290
+ +E+ GLSP+ +TW+ L+ + G + K M AG P+ + T I
Sbjct: 440 KIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAY 499
Query: 291 VESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQD 343
+F+QA+T+Y M + P+ TYNT+L A ++ G + ++ LA +D
Sbjct: 500 SRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMED 552
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/368 (22%), Positives = 168/368 (45%), Gaps = 38/368 (10%)
Query: 12 LNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYST 71
++I++ M+N G KP++ ++N +K G+ ++ E+ +V L D+ T++T
Sbjct: 404 MSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEI----NVCGLSPDIVTWNT 459
Query: 72 IIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAG 131
++ VF + V +M+ AG +++LI+A + G EQA+ ++ ML AG
Sbjct: 460 LLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAG 519
Query: 132 CEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNK----------MLGSFGEGYNSNLKQ 181
P+ +N +L A ++++ + + + +L ++ G L
Sbjct: 520 VTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMH 579
Query: 182 G---SIHNATTVPNGF---------SNSQILSFTERF-------PFTPTTSTYNTLLKAC 222
+++ P S +L ER F+P +T N+++
Sbjct: 580 SLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIY 639
Query: 223 GSDYYHAKA--LINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDV 280
G AKA +++ MK G +P+ T++ L+ + + + + EIL+ + GIKPD+
Sbjct: 640 GRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDI 699
Query: 281 IAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAI 340
I+Y T I + + A ++ EM++ I P+ +TYNT + + Y + ++ + +
Sbjct: 700 ISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGS---YAADSMFEEAIGV 756
Query: 341 YQDMQKAG 348
+ M K G
Sbjct: 757 VRYMIKHG 764
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 89/360 (24%), Positives = 167/360 (46%), Gaps = 33/360 (9%)
Query: 2 NVNSRDLTYTLNIYQIMQNLGLKPDMTSYNIL--LKACCVAGRVDLAQ---DMYKELKHL 56
N +S L L+ ++ + KP+ TS +L LK + DLA D + + K
Sbjct: 110 NFDSGQLDSVLS--ELFEPFKDKPESTSSELLAFLKGLGFHKKFDLALRAFDWFMKQKDY 167
Query: 57 ESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGL 116
+S+ LD + II + A + + ++ G +L+ +++SLI+A A++G
Sbjct: 168 QSM----LDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGR 223
Query: 117 VEQAIQLFEEMLLAGCEPNTQCFNIILHACVE-ACQYDRAFRFFHSWKGNKMLGSFGEGY 175
+A+ +F++M GC+P +N+IL+ + +++ K + G + Y
Sbjct: 224 YREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSD---GIAPDAY 280
Query: 176 NSNL-----KQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAK 230
N K+GS+H +Q+ + F+ TYN LL G + +
Sbjct: 281 TYNTLITCCKRGSLHQEA--------AQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKE 332
Query: 231 AL--INEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIK 288
A+ +NEM G SP+ +T++ LI ++ A+E+ M + G KPDV YTT +
Sbjct: 333 AMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLS 392
Query: 289 VCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAG 348
+ + A++++EEM++ PN T+N +K YG+ + + + I+ ++ G
Sbjct: 393 GFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKM---YGNRGKFTEMMKIFDEINVCG 449
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 80/354 (22%), Positives = 146/354 (41%), Gaps = 43/354 (12%)
Query: 4 NSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLK 63
N T + I+ + GL PD+ ++N LL G ++KE+K V +
Sbjct: 431 NRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERE 490
Query: 64 LDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQL 123
T++T+I ++ ++ A+ V M AGV + +++++ A A G+ EQ+ ++
Sbjct: 491 ----TFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKV 546
Query: 124 FEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSF------------ 171
EM C+PN + +LHA + HS G
Sbjct: 547 LAEMEDGRCKPNELTYCSLLHAYANG----KEIGLMHSLAEEVYSGVIEPRAVLLKTLVL 602
Query: 172 ----------GEGYNSNLKQGSIHNATTVPNGFSN-----------SQILSFTERFPFTP 210
E S LK+ T N + + +L + + FTP
Sbjct: 603 VCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTP 662
Query: 211 TTSTYNTLL--KACGSDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEIL 268
+ +TYN+L+ + +D+ ++ ++ E+ G+ P+ I+++ +I + A I
Sbjct: 663 SMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIF 722
Query: 269 KSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLL 322
M ++GI PDVI Y T I F++A+ + M PN TYN+++
Sbjct: 723 SEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIV 776
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/150 (21%), Positives = 71/150 (47%), Gaps = 4/150 (2%)
Query: 14 IYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTII 73
+ M+ G P M +YN L+ + ++++ +E+ +K D+ +Y+T+I
Sbjct: 651 VLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREIL----AKGIKPDIISYNTVI 706
Query: 74 KVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCE 133
+ + A ++ +MR++G+ + + +++ I + A + E+AI + M+ GC
Sbjct: 707 YAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCR 766
Query: 134 PNTQCFNIILHACVEACQYDRAFRFFHSWK 163
PN +N I+ + + D A F +
Sbjct: 767 PNQNTYNSIVDGYCKLNRKDEAKLFVEDLR 796
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 85/319 (26%), Positives = 143/319 (44%), Gaps = 20/319 (6%)
Query: 12 LNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYK--ELKHLESVGRLKLDVFTY 69
L + M + GLKPDM +YN +++ C G VD A +M + ELK E DV +Y
Sbjct: 248 LKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEP------DVISY 301
Query: 70 STIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLL 129
+ +++ + W+ K+ M S + N V +S LI G +E+A+ L + M
Sbjct: 302 NILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKE 361
Query: 130 AGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATT 189
G P+ ++ ++ A + D A F + + L YN+ L AT
Sbjct: 362 KGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDI-VNYNTVL-------ATL 413
Query: 190 VPNGFSNSQILSFTE--RFPFTPTTSTYNTLLKACGS--DYYHAKALINEMKTVGLSPNQ 245
NG ++ + F + +P +S+YNT+ A S D A +I EM + G+ P++
Sbjct: 414 CKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDE 473
Query: 246 ITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEE 305
IT++ +I V+ A E+L M P V+ Y + ++ + A+ + E
Sbjct: 474 ITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLES 533
Query: 306 MKSCEIHPNWVTYNTLLKA 324
M PN TY L++
Sbjct: 534 MVGNGCRPNETTYTVLIEG 552
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 148/323 (45%), Gaps = 17/323 (5%)
Query: 6 RDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLD 65
R++ + + +I++ G +PD+ +YN L+ C R+D A + ++ + D
Sbjct: 138 RNIPKAVRVMEILEKFG-QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKD----FSPD 192
Query: 66 VFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFE 125
TY+ +I +ALKV + + S + ++ LI A G V++A++L +
Sbjct: 193 TVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMD 252
Query: 126 EMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIH 185
EML G +P+ +N I+ + DRAF + + + G + + N+ ++
Sbjct: 253 EMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLE---LKGCEPDVISYNILLRALL 309
Query: 186 NATTVPNGFSNSQILS--FTERFPFTPTTSTYNTLLKACGSD--YYHAKALINEMKTVGL 241
N G ++++ F+E+ P TY+ L+ D A L+ MK GL
Sbjct: 310 NQGKWEEG---EKLMTKMFSEKC--DPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGL 364
Query: 242 SPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALT 301
+P+ ++ LI ++ AIE L++M G PD++ Y T + ++ QAL
Sbjct: 365 TPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALE 424
Query: 302 LYEEMKSCEIHPNWVTYNTLLKA 324
++ ++ PN +YNT+ A
Sbjct: 425 IFGKLGEVGCSPNSSSYNTMFSA 447
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 81/327 (24%), Positives = 149/327 (45%), Gaps = 18/327 (5%)
Query: 18 MQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFA 77
M++ PD +YNI++ + C G++DLA K L L S + V TY+ +I+
Sbjct: 184 MRSKDFSPDTVTYNIMIGSLCSRGKLDLA---LKVLNQLLS-DNCQPTVITYTILIEATM 239
Query: 78 DAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQ 137
ALK+ +M S G+ + ++++I G+V++A ++ + L GCEP+
Sbjct: 240 LEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVI 299
Query: 138 CFNIILHACVEACQYDRAFRFFHSWKGNKMLGS-FGEGYNSNLKQGSIHNATTVPNGFSN 196
+NI+L A + +++ +G K++ F E + N+ SI T +G
Sbjct: 300 SYNILLRALLNQGKWE---------EGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIE 350
Query: 197 S--QILSFTERFPFTPTTSTYNTLLKA-CGSDYYH-AKALINEMKTVGLSPNQITWSILI 252
+L + TP +Y+ L+ A C A + M + G P+ + ++ ++
Sbjct: 351 EAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVL 410
Query: 253 DICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIH 312
+ A+EI +G+ G P+ +Y T S + +AL + EM S I
Sbjct: 411 ATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGID 470
Query: 313 PNWVTYNTLLKARSKYGSVLEVQQCLA 339
P+ +TYN+++ + G V E + L
Sbjct: 471 PDEITYNSMISCLCREGMVDEAFELLV 497
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 108/240 (45%), Gaps = 24/240 (10%)
Query: 25 PDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQM 84
P++ +Y+IL+ C G+++ A ++ K +K L D ++Y +I F +
Sbjct: 331 PNVVTYSILITTLCRDGKIEEAMNLLKLMKE----KGLTPDAYSYDPLIAAFCREGRLDV 386
Query: 85 ALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILH 144
A++ M S G + V +++++ G +QA+++F ++ GC PN+ +N +
Sbjct: 387 AIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFS 446
Query: 145 ACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNL----KQGSIHNATTVPNGFSNSQIL 200
A + RA N + YNS + ++G + A ++L
Sbjct: 447 ALWSSGDKIRALHMILEMMSNG-IDPDEITYNSMISCLCREGMVDEAF---------ELL 496
Query: 201 SFTERFPFTPTTSTYN-TLLKACGSDYYHAKALINEMKTV---GLSPNQITWSILIDICG 256
F P+ TYN LL C + + + IN ++++ G PN+ T+++LI+ G
Sbjct: 497 VDMRSCEFHPSVVTYNIVLLGFCKA--HRIEDAINVLESMVGNGCRPNETTYTVLIEGIG 554
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 68/136 (50%), Gaps = 3/136 (2%)
Query: 198 QILSFTERFPFTPTTSTYNTLLKA-CGSDYYH-AKALINEMKTVGLSPNQITWSILIDIC 255
+++ E+F P YN L+ C + A +++ M++ SP+ +T++I+I
Sbjct: 145 RVMEILEKFG-QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSL 203
Query: 256 GGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNW 315
++ A+++L + +P VI YT I+ + +AL L +EM S + P+
Sbjct: 204 CSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDM 263
Query: 316 VTYNTLLKARSKYGSV 331
TYNT+++ K G V
Sbjct: 264 FTYNTIIRGMCKEGMV 279
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 83/325 (25%), Positives = 146/325 (44%), Gaps = 16/325 (4%)
Query: 7 DLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDV 66
D+ +++ M+ GL PD +YN ++ GR+D ++E+K + + DV
Sbjct: 277 DVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCC----EPDV 332
Query: 67 FTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEE 126
TY+ +I F + L+ +M+ G+ N V++S+L++A G+++QAI+ + +
Sbjct: 333 ITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVD 392
Query: 127 MLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHN 186
M G PN + ++ A + AFR GN+ML G +N I
Sbjct: 393 MRRVGLVPNEYTYTSLIDANCKIGNLSDAFRL-----GNEML-QVGVEWNVVTYTALIDG 446
Query: 187 ATTVPNGFSNSQILSFTERFPFTPTTSTYNTLL----KACGSDYYHAKALINEMKTVGLS 242
++ + P ++YN L+ KA D A L+NE+K G+
Sbjct: 447 LCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMD--RALELLNELKGRGIK 504
Query: 243 PNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTL 302
P+ + + I E +E A ++ M + GIK + + YTT + +S N + L L
Sbjct: 505 PDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHL 564
Query: 303 YEEMKSCEIHPNWVTYNTLLKARSK 327
+EMK +I VT+ L+ K
Sbjct: 565 LDEMKELDIEVTVVTFCVLIDGLCK 589
Score = 104 bits (260), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 93/352 (26%), Positives = 161/352 (45%), Gaps = 32/352 (9%)
Query: 8 LTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVF 67
L L Y+ M+ GLKP++ SY+ L+ A C G + A Y +++ + V + +
Sbjct: 348 LPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVP----NEY 403
Query: 68 TYSTIIKVFADAKLWQM--ALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFE 125
TY+++I A+ K+ + A ++ ++M GV N V +++LI+ A +++A +LF
Sbjct: 404 TYTSLID--ANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFG 461
Query: 126 EMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNK------MLGSFGEGYNSNL 179
+M AG PN +N ++H V+A DRA + KG + G+F G S
Sbjct: 462 KMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLE 521
Query: 180 KQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKAC--GSDYYHAKALINEMK 237
K I A V N I + Y TL+ A + L++EMK
Sbjct: 522 K---IEAAKVVMNEMKECGI---------KANSLIYTTLMDAYFKSGNPTEGLHLLDEMK 569
Query: 238 TVGLSPNQITWSILIDICGGTENVEGAIEILKSMG-DAGIKPDVIAYTTAIKVCVESKNF 296
+ + +T+ +LID + V A++ + D G++ + +T I +
Sbjct: 570 ELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQV 629
Query: 297 KQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAG 348
+ A TL+E+M + P+ Y +L+ K G+VLE LA+ M + G
Sbjct: 630 EAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEA---LALRDKMAEIG 678
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 101/250 (40%), Gaps = 46/250 (18%)
Query: 103 AWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSW 162
+ +L + G++E+AIQ F +M P T+ N +LH + + D RFF
Sbjct: 194 VFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKD- 252
Query: 163 KGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKAC 222
M+G+ PT TYN ++
Sbjct: 253 ----MIGAGAR------------------------------------PTVFTYNIMIDCM 272
Query: 223 --GSDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDV 280
D A+ L EMK GL P+ +T++ +ID G ++ + + M D +PDV
Sbjct: 273 CKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDV 332
Query: 281 IAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAI 340
I Y I + L Y EMK + PN V+Y+TL+ A K G +QQ +
Sbjct: 333 ITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGM---MQQAIKF 389
Query: 341 YQDMQKAGYV 350
Y DM++ G V
Sbjct: 390 YVDMRRVGLV 399
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/298 (21%), Positives = 126/298 (42%), Gaps = 25/298 (8%)
Query: 14 IYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGR-LKLDVFTYSTI 72
++ M G+ P++ SYN L+ A +D A ++ ELK GR +K D+ Y T
Sbjct: 459 LFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELK-----GRGIKPDLLLYGTF 513
Query: 73 IKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGC 132
I + + A V ++M+ G+ N++ +++L++A +G + + L +EM
Sbjct: 514 IWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDI 573
Query: 133 EPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPN 192
E F +++ + +A +F N++ FG N+ + I
Sbjct: 574 EVTVVTFCVLIDGLCKNKLVSKAVDYF-----NRISNDFGLQANAAIFTAMIDGLC---- 624
Query: 193 GFSNSQILSFTERFP------FTPTTSTYNTLLKAC--GSDYYHAKALINEMKTVGLSPN 244
++Q+ + T F P + Y +L+ + A AL ++M +G+ +
Sbjct: 625 --KDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLD 682
Query: 245 QITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTL 302
+ ++ L+ ++ A L+ M GI PD + + +K E +A+ L
Sbjct: 683 LLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVEL 740
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 92/377 (24%), Positives = 159/377 (42%), Gaps = 54/377 (14%)
Query: 11 TLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYS 70
+ + + M+ ++P + ++N LLK AG V+ A+++ KE+K L V D FT+S
Sbjct: 268 SFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVP----DAFTFS 323
Query: 71 TIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLA 130
+ ++ + + AL V +GV +N S L+NA G +E+A ++ +
Sbjct: 324 ILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAK 383
Query: 131 GCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQ----GSIHN 186
G PN +N ++ A + + M YN +++ G + N
Sbjct: 384 GLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDH-LAYNCLIRRFCELGEMEN 442
Query: 187 ATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKA--LINEMKTVGLSPN 244
A N + +P+ TYN L+ G Y K ++ EM+ G PN
Sbjct: 443 AEKEVNKMKLKGV---------SPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPN 493
Query: 245 QITWSILID-ICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLY 303
+++ LI+ +C G++ +E I + + M D G+ P V Y I C + A
Sbjct: 494 VVSYGTLINCLCKGSKLLEAQI-VKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFS 552
Query: 304 EEMKSCEIHPNWVTYNTLLKARSKYGSVLE------------------------------ 333
+EM I N VTYNTL+ S G + E
Sbjct: 553 KEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFA 612
Query: 334 --VQQCLAIYQDMQKAG 348
VQ+C+A+Y++M+++G
Sbjct: 613 GNVQRCIALYEEMKRSG 629
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/337 (24%), Positives = 151/337 (44%), Gaps = 40/337 (11%)
Query: 16 QIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKV 75
+ M+ G+KPD +YN L++ C G ++ A+ KE+ ++ G + V TY+ +I
Sbjct: 413 EAMEKQGMKPDHLAYNCLIRRFCELGEMENAE---KEVNKMKLKG-VSPSVETYNILIGG 468
Query: 76 FADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINA-CAHAGLVEQAIQLFEEMLLAGCEP 134
+ + + +M G N V++ +LIN C + L+E I + +M G P
Sbjct: 469 YGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQI-VKRDMEDRGVSP 527
Query: 135 NTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQG---SIHNATTVP 191
+ +N+++ C + + AFRF LK+G ++ T+
Sbjct: 528 KVRIYNMLIDGCCSKGKIEDAFRFSKEM----------------LKKGIELNLVTYNTLI 571
Query: 192 NGFSNSQILSFTE-------RFPFTPTTSTYNTLLKACG--SDYYHAKALINEMKTVGLS 242
+G S + LS E R P TYN+L+ G + AL EMK G+
Sbjct: 572 DGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIK 631
Query: 243 PNQITWSILIDICGGTENVEGAIEILKSM-GDAGIKPDVIAYTTAIKVCVESKNFKQALT 301
P T+ +LI +C + IE+ + + G+ +KPD++ Y + + ++A
Sbjct: 632 PTLKTYHLLISLC-----TKEGIELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFN 686
Query: 302 LYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCL 338
L ++M I + TYN+L+ + K G + EV+ +
Sbjct: 687 LQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLI 723
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 89/360 (24%), Positives = 152/360 (42%), Gaps = 38/360 (10%)
Query: 12 LNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYST 71
L +Y+ + G+K + + +ILL A C G+++ A+ E+ E L + Y+T
Sbjct: 339 LGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAE----EILGREMAKGLVPNEVIYNT 394
Query: 72 IIKVF-ADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLA 130
+I + L +K++ M G+ + +A++ LI G +E A + +M L
Sbjct: 395 MIDGYCRKGDLVGARMKIEA-MEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLK 453
Query: 131 GCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLG---SFGEGYNSNLKQGSIHNA 187
G P+ + +NI++ ++D+ F + N + S+G N K + A
Sbjct: 454 GVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEA 513
Query: 188 TTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSD--YYHAKALINEMKTVGLSPNQ 245
V + + +P YN L+ C S A EM G+ N
Sbjct: 514 QIVKRDMEDRGV---------SPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNL 564
Query: 246 ITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEE 305
+T++ LID T + A ++L + G+KPDV Y + I + N ++ + LYEE
Sbjct: 565 VTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEE 624
Query: 306 MKSCEIHPNWVTYNTLLKARSKYGSVLE------------------VQQCLAIYQDMQKA 347
MK I P TY+ L+ +K G L V C A++ DM+KA
Sbjct: 625 MKRSGIKPTLKTYHLLISLCTKEGIELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKA 684
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 86/359 (23%), Positives = 152/359 (42%), Gaps = 37/359 (10%)
Query: 3 VNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRL 62
V D+ L ++ M++ + P + YN+L+ C R++ A+ ++ E+ RL
Sbjct: 190 VKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEM----LARRL 245
Query: 63 KLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQ 122
+ TY+T+I + A + + KV+ M++ + + + +++L+ AG+VE A
Sbjct: 246 LPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAEN 305
Query: 123 LFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSW--KGNKMLGSFGEGY----- 175
+ +EM G P+ F+I+ + + A + + G KM Y
Sbjct: 306 VLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKM-----NAYTCSIL 360
Query: 176 -NSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKA-C-GSDYYHAKAL 232
N+ K+G I A +IL P YNT++ C D A+
Sbjct: 361 LNALCKEGKIEKA---------EEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMK 411
Query: 233 INEMKTVGLSPNQITWSILI-DIC--GGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKV 289
I M+ G+ P+ + ++ LI C G EN E + +K G+ P V Y I
Sbjct: 412 IEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKL---KGVSPSVETYNILIGG 468
Query: 290 CVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAG 348
F + + +EM+ PN V+Y TL+ K +LE Q + +DM+ G
Sbjct: 469 YGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQ---IVKRDMEDRG 524
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 75/349 (21%), Positives = 141/349 (40%), Gaps = 56/349 (16%)
Query: 5 SRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKL 64
S+ ++ +++ ++N G+ P S +LL + + +++ L LES +
Sbjct: 122 SKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVF--LNILES--DFRP 177
Query: 65 DVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLF 124
F Y I+ L++ + M+ + + ++ LI+ + A QLF
Sbjct: 178 SKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLF 237
Query: 125 EEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSI 184
+EML P+ +N ++ +A +++F+ K + +
Sbjct: 238 DEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHI----------------- 280
Query: 185 HNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKAC--GSDYYHAKALINEMKTVGLS 242
P+ T+NTLLK A+ ++ EMK +G
Sbjct: 281 ------------------------EPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFV 316
Query: 243 PNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAI---KVCVESKNFKQA 299
P+ T+SIL D E E A+ + ++ D+G+K + AYT +I +C E K K
Sbjct: 317 PDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMN--AYTCSILLNALCKEGKIEKAE 374
Query: 300 LTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAG 348
L EM + PN V YNT++ + G ++ + + + M+K G
Sbjct: 375 EILGREMAKGLV-PNEVIYNTMIDGYCRKGDLVGARMKI---EAMEKQG 419
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 73/146 (50%), Gaps = 7/146 (4%)
Query: 208 FTPTTSTYNTLLKACG--SDYYHAKALINEMKTVGLSPNQITWSILID-ICGGTENVEGA 264
F P+ Y ++A SD L N MK + P+ +++LID +C G + + A
Sbjct: 175 FRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKG-KRMNDA 233
Query: 265 IEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKA 324
++ M + P +I Y T I ++ N +++ + E MK+ I P+ +T+NTLLK
Sbjct: 234 EQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKG 293
Query: 325 RSKYGSVLEVQQCLAIYQDMQKAGYV 350
K G V + + L ++M+ G+V
Sbjct: 294 LFKAGMVEDAENVL---KEMKDLGFV 316
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/174 (21%), Positives = 78/174 (44%), Gaps = 18/174 (10%)
Query: 14 IYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTII 73
+Y+ M+ G+KP + +Y++L+ C G ++L + ++ E+ LK D+ Y+ ++
Sbjct: 621 LYEEMKRSGIKPTLKTYHLLISLCTKEG-IELTERLFGEMS-------LKPDLLVYNGVL 672
Query: 74 KVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCE 133
+A + A ++ M + L+ ++SLI G + + L +EM E
Sbjct: 673 HCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREME 732
Query: 134 PNTQCFNIILHACVEACQYDRAFRFFHSWK----------GNKMLGSFGEGYNS 177
P +NII+ E Y A+ ++ + GN+++ E + S
Sbjct: 733 PEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWRS 786
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 108 bits (269), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 148/325 (45%), Gaps = 32/325 (9%)
Query: 18 MQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFA 77
+ G P++ Y L+ CC G ++ A+D++ E+ L V + TY+ +I
Sbjct: 189 LTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANER----TYTVLINGLF 244
Query: 78 DAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQ 137
+ + ++ M+ GV N ++ ++N G + A Q+F+EM G N
Sbjct: 245 KNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIV 304
Query: 138 CFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSN- 196
+N ++ + + A + K +G N NL T+ +GF
Sbjct: 305 TYNTLIGGLCREMKLNEANKVVDQMKS--------DGINPNL-----ITYNTLIDGFCGV 351
Query: 197 ---SQILSFTERFP---FTPTTSTYNTLLKAC--GSDYYHAKALINEMKTVGLSPNQITW 248
+ LS +P+ TYN L+ D A ++ EM+ G+ P+++T+
Sbjct: 352 GKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTY 411
Query: 249 SILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIK-VCVESKNFKQALTLYEEM- 306
+ILID ++N+E AI++ SM + G+ PDV Y+ I C++ + +A L++ M
Sbjct: 412 TILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQ-MNEASRLFKSMV 470
Query: 307 -KSCEIHPNWVTYNTLLKARSKYGS 330
K+CE PN V YNT++ K GS
Sbjct: 471 EKNCE--PNEVIYNTMILGYCKEGS 493
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/354 (22%), Positives = 149/354 (42%), Gaps = 42/354 (11%)
Query: 3 VNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRL 62
V S+ L +++ + M + G P +N LL + + + E K ++
Sbjct: 105 VQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENK-----SKV 159
Query: 63 KLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQ 122
LDV+++ +IK +A + + + ++ G + N V +++LI+ C G +E+A
Sbjct: 160 VLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKD 219
Query: 123 LFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSN---- 178
LF EM G N + + ++++ + + F + + + G F Y N
Sbjct: 220 LFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQED---GVFPNLYTYNCVMN 276
Query: 179 --LKQGSIHNA-------------------TTVPNGFSNSQILSFTERF-------PFTP 210
K G +A T+ G L+ + P
Sbjct: 277 QLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINP 336
Query: 211 TTSTYNTLLKA-CG-SDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEIL 268
TYNTL+ CG A +L ++K+ GLSP+ +T++IL+ + GA +++
Sbjct: 337 NLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMV 396
Query: 269 KSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLL 322
K M + GIKP + YT I S N ++A+ L M+ + P+ TY+ L+
Sbjct: 397 KEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLI 450
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 103/223 (46%), Gaps = 13/223 (5%)
Query: 104 WSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWK 163
+ +IN+ + + +I F EM+ G P + CFN +L V + +++ + FF+ K
Sbjct: 97 YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENK 156
Query: 164 GNKMLG--SFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKA 221
+L SFG + G I + + ++ TE F F+P Y TL+
Sbjct: 157 SKVVLDVYSFGILIKGCCEAGEIEKSFDL--------LIELTE-FGFSPNVVIYTTLIDG 207
Query: 222 C--GSDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPD 279
C + AK L EM +GL N+ T+++LI+ + E+ + M + G+ P+
Sbjct: 208 CCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPN 267
Query: 280 VIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLL 322
+ Y + + K A +++EM+ + N VTYNTL+
Sbjct: 268 LYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLI 310
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 112/264 (42%), Gaps = 49/264 (18%)
Query: 18 MQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFA 77
M++ G+ P++ +YN L+ C G++ A + ++LK S G L + TY+ ++ F
Sbjct: 329 MKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLK---SRG-LSPSLVTYNILVSGFC 384
Query: 78 DAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQ 137
A K+ +M G+ + V ++ LI+ A + +E+AIQL M G P+
Sbjct: 385 RKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVH 444
Query: 138 CFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNS 197
+++++H Q + A R F S M+ E
Sbjct: 445 TYSVLIHGFCIKGQMNEASRLFKS-----MVEKNCE------------------------ 475
Query: 198 QILSFTERFPFTPTTSTYNTL-LKAC--GSDYYHAKALINEMKTVGLSPNQITWSILIDI 254
P YNT+ L C GS Y A L+ EM+ L+PN ++ +I++
Sbjct: 476 ------------PNEVIYNTMILGYCKEGSSY-RALKLLKEMEEKELAPNVASYRYMIEV 522
Query: 255 CGGTENVEGAIEILKSMGDAGIKP 278
+ A +++ M D+GI P
Sbjct: 523 LCKERKSKEAERLVEKMIDSGIDP 546
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 108 bits (269), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 98/338 (28%), Positives = 158/338 (46%), Gaps = 19/338 (5%)
Query: 15 YQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYST-II 73
YQ+M + GL PD+ Y +L + C G L K L + S+G +K +V+ Y+ I+
Sbjct: 187 YQLMISRGLVPDVHIYFVLFQCCFKQG---LYSKKEKLLDEMTSLG-IKPNVYIYTIYIL 242
Query: 74 KVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCE 133
+ D K+ + A K+ M+ GV N +S++I+ G V QA L++E+L+A
Sbjct: 243 DLCRDNKMEE-AEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELL 301
Query: 134 PNTQCFNIILHACVEACQYDRAFRFF-HSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPN 192
PN F ++ +A + A F H K FG N + IH N
Sbjct: 302 PNVVVFGTLVDGFCKARELVTARSLFVHMVK-------FGVDPNLYVYNCLIHGHCKSGN 354
Query: 193 GFSNSQILSFTERFPFTPTTSTYNTLLKA-CGSDYY-HAKALINEMKTVGLSPNQITWSI 250
+LS E +P TY L+ C D A L +MK + P+ T++
Sbjct: 355 MLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNS 414
Query: 251 LIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCE 310
LI N+E A+++ M +G++P++I ++T I ++ K A+ LY EM
Sbjct: 415 LIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKG 474
Query: 311 IHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAG 348
I P+ VTY L+ A K + +++ L +Y DM +AG
Sbjct: 475 IVPDVVTYTALIDAHFKEAN---MKEALRLYSDMLEAG 509
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/345 (23%), Positives = 153/345 (44%), Gaps = 31/345 (8%)
Query: 14 IYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTII 73
++++M+ G+ P++ +Y+ ++ C G V A +YKE+ V L +V + T++
Sbjct: 256 MFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEIL----VAELLPNVVVFGTLV 311
Query: 74 KVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCE 133
F A+ A + M GV+ N ++ LI+ +G + +A+ L EM
Sbjct: 312 DGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLS 371
Query: 134 PNTQCFNIILHA-CVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNL----KQGSIHNAT 188
P+ + I+++ C+E Q A R F K ++ S YNS + K+ ++ A
Sbjct: 372 PDVFTYTILINGLCIED-QVAEANRLFQKMKNERIFPS-SATYNSLIHGYCKEYNMEQAL 429
Query: 189 TVPNGFSNSQILSFTERFPFTPTTSTYNTLLKA-CG-SDYYHAKALINEMKTVGLSPNQI 246
+ + + S + P T++TL+ C D A L EM G+ P+ +
Sbjct: 430 DLCSEMTASGV---------EPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVV 480
Query: 247 TWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEE- 305
T++ LID N++ A+ + M +AGI P+ + + + A+ Y+E
Sbjct: 481 TYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQEN 540
Query: 306 --MKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAG 348
+SC N V + L++ + G +L + + DM+ G
Sbjct: 541 NQQRSCW---NHVGFTCLIEGLCQNGYILRASR---FFSDMRSCG 579
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/314 (21%), Positives = 129/314 (41%), Gaps = 43/314 (13%)
Query: 18 MQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFA 77
M++L L PD+ +Y IL+ C+ +V A +++++K+ R+ TY+++I +
Sbjct: 365 MESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKN----ERIFPSSATYNSLIHGYC 420
Query: 78 DAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQ 137
+ AL + +M ++GV N + +S+LI+ + ++ A+ L+ EM + G P+
Sbjct: 421 KEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVV 480
Query: 138 CFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNS 197
+ ++ A + A R + + ML + G + N H + +GF
Sbjct: 481 TYTALIDAHFKEANMKEALRLY-----SDMLEA---GIHPN-----DHTFACLVDGFWKE 527
Query: 198 QILSFTERFPFTPTTSTYNTLLKACGSDYYHAKALINEMKTVGLSPNQITWSILIDICGG 257
LS D+Y N+ ++ N + ++ LI+
Sbjct: 528 GRLSV--------------------AIDFYQEN---NQQRSCW---NHVGFTCLIEGLCQ 561
Query: 258 TENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVT 317
+ A M GI PD+ +Y + +K ++ K + L +M I PN +
Sbjct: 562 NGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGILPNLLV 621
Query: 318 YNTLLKARSKYGSV 331
L + G V
Sbjct: 622 NQLLARFYQANGYV 635
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 73/350 (20%), Positives = 137/350 (39%), Gaps = 58/350 (16%)
Query: 5 SRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKL 64
+R+L +++ M G+ P++ YN L+ C +G + A + E++ L L
Sbjct: 317 ARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLN----LSP 372
Query: 65 DVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLF 124
DVFTY+ +I A ++ M++ + ++ ++SLI+ +EQA+ L
Sbjct: 373 DVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLC 432
Query: 125 EEMLLAGCEPNTQCFNIIL--HACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQG 182
EM +G EPN F+ ++ + V + F + KG
Sbjct: 433 SEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKG------------------ 474
Query: 183 SIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKAC--GSDYYHAKALINEMKTVG 240
P TY L+ A ++ A L ++M G
Sbjct: 475 -------------------------IVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAG 509
Query: 241 LSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQAL 300
+ PN T++ L+D + AI+ + + + +T I+ ++ +A
Sbjct: 510 IHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRAS 569
Query: 301 TLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQ--QCLAIYQDMQKAG 348
+ +M+SC I P+ +Y ++LK + + + QC DM K G
Sbjct: 570 RFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQC-----DMIKTG 614
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/341 (25%), Positives = 155/341 (45%), Gaps = 17/341 (4%)
Query: 12 LNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYST 71
LN+++ M+ G++P++ +Y+ L+ C GR A + ++ ++ DVFT+S
Sbjct: 276 LNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIER----KINPDVFTFSA 331
Query: 72 IIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINA-CAHAGLVEQAIQLFEEMLLA 130
+I F A K+ +M ++ + V +SSLIN C H L ++A Q+FE M+
Sbjct: 332 LIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRL-DEAKQMFEFMVSK 390
Query: 131 GCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTV 190
C P+ +N ++ C+Y R ++ G G N+ + A
Sbjct: 391 HCFPDVVTYNTLIKG---FCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDC 447
Query: 191 PNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKALI--NEMKTVGLSPNQITW 248
+I P TYNTLL + KA++ ++ + P T+
Sbjct: 448 DMA---QEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTY 504
Query: 249 SILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKS 308
+I+I+ VE ++ ++ G+KPDV+AY T I + ++A L++EMK
Sbjct: 505 NIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKE 564
Query: 309 CEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGY 349
PN YNTL++AR + G + + + ++M+ G+
Sbjct: 565 DGTLPNSGCYNTLIRARLRDG---DREASAELIKEMRSCGF 602
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 141/319 (44%), Gaps = 26/319 (8%)
Query: 22 GLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKL 81
G +PD+ +Y +++ C G DLA ++ +++ G+L+ V Y+TII K
Sbjct: 216 GCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQ----GKLEPGVLIYNTIIDGLCKYKH 271
Query: 82 WQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNI 141
AL + +M + G+ N V +SSLI+ + G A +L +M+ P+ F+
Sbjct: 272 MDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSA 331
Query: 142 ILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGF------- 194
++ A V+ + A + + + SI +++ NGF
Sbjct: 332 LIDAFVKEGKLVEAEKLYDEMVKRSI-------------DPSIVTYSSLINGFCMHDRLD 378
Query: 195 SNSQILSFTERFPFTPTTSTYNTLLKA-CG-SDYYHAKALINEMKTVGLSPNQITWSILI 252
Q+ F P TYNTL+K C + EM GL N +T++ILI
Sbjct: 379 EAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILI 438
Query: 253 DICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIH 312
+ + A EI K M G+ P+++ Y T + ++ ++A+ ++E ++ ++
Sbjct: 439 QGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKME 498
Query: 313 PNWVTYNTLLKARSKYGSV 331
P TYN +++ K G V
Sbjct: 499 PTIYTYNIMIEGMCKAGKV 517
Score = 101 bits (251), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 137/318 (43%), Gaps = 20/318 (6%)
Query: 25 PDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQM 84
P + ++ LL A + D+ + +++++L + + +TYS +I F +
Sbjct: 79 PSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLG----IPHNHYTYSILINCFCRRSQLPL 134
Query: 85 ALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILH 144
AL V M G N V SSL+N H+ + +A+ L ++M + G +PNT FN ++H
Sbjct: 135 ALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIH 194
Query: 145 ACVEACQYDRAFRFFHSW--KG-NKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILS 201
+ A KG L ++G N K+G A + N ++
Sbjct: 195 GLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKL-- 252
Query: 202 FTERFPFTPTTSTYNTLLKACGSDYYH---AKALINEMKTVGLSPNQITWSILIDICGGT 258
P YNT++ Y H A L EM+T G+ PN +T+S LI
Sbjct: 253 -------EPGVLIYNTIIDGL-CKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNY 304
Query: 259 ENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTY 318
A +L M + I PDV ++ I V+ +A LY+EM I P+ VTY
Sbjct: 305 GRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTY 364
Query: 319 NTLLKARSKYGSVLEVQQ 336
++L+ + + E +Q
Sbjct: 365 SSLINGFCMHDRLDEAKQ 382
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 121/271 (44%), Gaps = 18/271 (6%)
Query: 14 IYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKEL--KHLESVGRLKLDVFTYST 71
+Y M + P + +Y+ L+ C+ R+D A+ M++ + KH DV TY+T
Sbjct: 348 LYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFP------DVVTYNT 401
Query: 72 IIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAG 131
+IK F K + ++V +M G+ NTV ++ LI AG + A ++F+EM+ G
Sbjct: 402 LIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDG 461
Query: 132 CEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVP 191
PN +N +L + + ++A F + +KM + Y N+ + A V
Sbjct: 462 VPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTI---YTYNIMIEGMCKAGKVE 518
Query: 192 NGFSNSQILSFTERFPFTPTTSTYNTLLKAC---GSDYYHAKALINEMKTVGLSPNQITW 248
+G+ LS P YNT++ GS A AL EMK G PN +
Sbjct: 519 DGWDLFCNLSLK---GVKPDVVAYNTMISGFCRKGSK-EEADALFKEMKEDGTLPNSGCY 574
Query: 249 SILIDICGGTENVEGAIEILKSMGDAGIKPD 279
+ LI + E + E++K M G D
Sbjct: 575 NTLIRARLRDGDREASAELIKEMRSCGFAGD 605
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 114/251 (45%), Gaps = 30/251 (11%)
Query: 102 VAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHS 161
+ +S L++A A + I L E+M G N ++I+++ Q A
Sbjct: 82 IEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLAL----- 136
Query: 162 WKGNKMLGSFGE-GYNSNLKQGSIHNATTVPNGFSNSQILS-----FTERF--PFTPTTS 213
+LG + GY N I +++ NG+ +S+ +S + F + P T
Sbjct: 137 ----AVLGKMMKLGYEPN-----IVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTV 187
Query: 214 TYNTLLKACGSDYYHAKA-----LINEMKTVGLSPNQITWSILIDICGGTENVEGAIEIL 268
T+NTL+ + H KA LI+ M G P+ +T+ ++++ + + A +L
Sbjct: 188 TFNTLIHGL---FLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLL 244
Query: 269 KSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKY 328
M ++P V+ Y T I + K+ AL L++EM++ I PN VTY++L+ Y
Sbjct: 245 NKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNY 304
Query: 329 GSVLEVQQCLA 339
G + + L+
Sbjct: 305 GRWSDASRLLS 315
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/338 (24%), Positives = 157/338 (46%), Gaps = 16/338 (4%)
Query: 17 IMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLE-SVGRLKLDVFTYSTIIKV 75
++ GLKPD YN +L + L E+ H + SV +K DV T++ +IK
Sbjct: 144 MIDEFGLKPDTHFYNRMLNLLVDGNSLKLV-----EISHAKMSVWGIKPDVSTFNVLIKA 198
Query: 76 FADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPN 135
A + A+ + DM S G+ + +++++ G ++ A+++ E+M+ GC +
Sbjct: 199 LCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWS 258
Query: 136 TQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFS 195
N+I+H + + + A F G F + Y N + A V +
Sbjct: 259 NVSVNVIVHGFCKEGRVEDALNFIQEMSNQD--GFFPDQYTFNTLVNGLCKAGHVKHAI- 315
Query: 196 NSQILSFTERFPFTPTTSTYNTLLKA-CG-SDYYHAKALINEMKTVGLSPNQITWSILID 253
+I+ + + P TYN+++ C + A ++++M T SPN +T++ LI
Sbjct: 316 --EIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLIS 373
Query: 254 ICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHP 313
VE A E+ + + GI PDV + + I+ ++N + A+ L+EEM+S P
Sbjct: 374 TLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEP 433
Query: 314 NWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYVR 351
+ TYN L+ + G ++ + L + + M+ +G R
Sbjct: 434 DEFTYNMLIDSLCSKG---KLDEALNMLKQMELSGCAR 468
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/338 (22%), Positives = 145/338 (42%), Gaps = 46/338 (13%)
Query: 3 VNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRL 62
+ DL L I + M G S N+++ C GRV+ A + +E+ + +
Sbjct: 235 IEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDG---F 291
Query: 63 KLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQ 122
D +T++T++ A + A+++ M G + + ++S+I+ G V++A++
Sbjct: 292 FPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVE 351
Query: 123 LFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQG 182
+ ++M+ C PNT +N ++ K+
Sbjct: 352 VLDQMITRDCSPNTVTYNTLISTLC--------------------------------KEN 379
Query: 183 SIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYH--AKALINEMKTVG 240
+ AT + ++ IL P T+N+L++ H A L EM++ G
Sbjct: 380 QVEEATELARVLTSKGIL---------PDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKG 430
Query: 241 LSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQAL 300
P++ T+++LID ++ A+ +LK M +G VI Y T I ++ ++A
Sbjct: 431 CEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAE 490
Query: 301 TLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCL 338
+++EM+ + N VTYNTL+ K V + Q +
Sbjct: 491 EIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLM 528
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 136/324 (41%), Gaps = 47/324 (14%)
Query: 10 YTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTY 69
+ + I +M G PD+ +YN ++ C G V A ++ ++ + + TY
Sbjct: 313 HAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDC----SPNTVTY 368
Query: 70 STIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLL 129
+T+I + A ++ + S G+ + ++SLI A++LFEEM
Sbjct: 369 NTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRS 428
Query: 130 AGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATT 189
GCEP+ +N+++ + + D A LKQ +
Sbjct: 429 KGCEPDEFTYNMLIDSLCSKGKLDEALNM--------------------LKQMEL----- 463
Query: 190 VPNGFSNSQILSFTERFPFTPTTSTYNTLLKA-CGSD-YYHAKALINEMKTVGLSPNQIT 247
+G + S I TYNTL+ C ++ A+ + +EM+ G+S N +T
Sbjct: 464 --SGCARSVI--------------TYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVT 507
Query: 248 WSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMK 307
++ LID + VE A +++ M G KPD Y + + + K+A + + M
Sbjct: 508 YNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMT 567
Query: 308 SCEIHPNWVTYNTLLKARSKYGSV 331
S P+ VTY TL+ K G V
Sbjct: 568 SNGCEPDIVTYGTLISGLCKAGRV 591
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 131/282 (46%), Gaps = 20/282 (7%)
Query: 5 SRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKL 64
+R+ + +++ M++ G +PD +YN+L+ + C G++D A +M K+++ L R
Sbjct: 413 TRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQME-LSGCAR--- 468
Query: 65 DVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLF 124
V TY+T+I F A + A ++ +M GV+ N+V +++LI+ + VE A QL
Sbjct: 469 SVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLM 528
Query: 125 EEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGN---KMLGSFGEGYNSNLKQ 181
++M++ G +P+ +N +L +A + N + ++G + K
Sbjct: 529 DQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKA 588
Query: 182 GSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKA--LINEM-KT 238
G + A S++L + T YN +++ +A L EM +
Sbjct: 589 GRVEVA---------SKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQ 639
Query: 239 VGLSPNQITWSILI-DICGGTENVEGAIEILKSMGDAGIKPD 279
P+ +++ I+ +C G + A++ L + + G P+
Sbjct: 640 NEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPE 681
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/334 (23%), Positives = 153/334 (45%), Gaps = 47/334 (14%)
Query: 12 LNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYST 71
L ++ M++ G++PD+ +YN LL AC + G D A+ +++ + G + D+ TYS
Sbjct: 232 LGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMND----GGIVPDLTTYSH 287
Query: 72 IIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAG 131
+++ F + + + +M S G + +++ L+ A A +G +++A+ +F +M AG
Sbjct: 288 LVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAG 347
Query: 132 CEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVP 191
C PN ++++L+ ++ +YD + F K
Sbjct: 348 CTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKS--------------------------- 380
Query: 192 NGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAK--ALINEMKTVGLSPNQITWS 249
SN+ P +TYN L++ G Y + L ++M + P+ T+
Sbjct: 381 ---SNTD-----------PDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYE 426
Query: 250 ILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSC 309
+I CG E A +IL+ M I P AYT I+ ++ +++AL + M
Sbjct: 427 GIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEV 486
Query: 310 EIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQD 343
+P+ T+++LL + ++ G V E + L+ D
Sbjct: 487 GSNPSIETFHSLLYSFARGGLVKESEAILSRLVD 520
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 130/299 (43%), Gaps = 43/299 (14%)
Query: 40 AGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNL 99
AGR D + + + K+++ K + Y+ +I + L L+V +M S GV+
Sbjct: 116 AGRGDWQRSL-RLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSR 174
Query: 100 NTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFF 159
+ ++++LINA G E +++L + M P+ +N +++AC R
Sbjct: 175 SVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACA---------RGG 225
Query: 160 HSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLL 219
W+G +LG F E + ++ P TYNTLL
Sbjct: 226 LDWEG--LLGLFAEMRHEGIQ-----------------------------PDIVTYNTLL 254
Query: 220 KACGSDYY--HAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIK 277
AC A+ + M G+ P+ T+S L++ G +E ++L M G
Sbjct: 255 SACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSL 314
Query: 278 PDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQ 336
PD+ +Y ++ +S + K+A+ ++ +M++ PN TY+ LL + G +V+Q
Sbjct: 315 PDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQ 373
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/290 (22%), Positives = 126/290 (43%), Gaps = 48/290 (16%)
Query: 63 KLDVFTYSTIIKVFADAKLWQMALKV-KHDMRSAGVNLNTVAWSSLINACAHAGLVEQAI 121
KL + ++ + K FA WQ +L++ K+ R N ++ +I+ GL+++ +
Sbjct: 102 KLSLNDFALVFKEFAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCL 161
Query: 122 QLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQ 181
++F+EM G + + +++A +Y+ + K K+
Sbjct: 162 EVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKI-------------- 207
Query: 182 GSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKAC---GSDYYHAKALINEMKT 238
+P+ TYNT++ AC G D+ L EM+
Sbjct: 208 ---------------------------SPSILTYNTVINACARGGLDWEGLLGLFAEMRH 240
Query: 239 VGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQ 298
G+ P+ +T++ L+ C + A + ++M D GI PD+ Y+ ++ + + ++
Sbjct: 241 EGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEK 300
Query: 299 ALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAG 348
L EM S P+ +YN LL+A +K GS +++ + ++ MQ AG
Sbjct: 301 VCDLLGEMASGGSLPDITSYNVLLEAYAKSGS---IKEAMGVFHQMQAAG 347
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/305 (20%), Positives = 128/305 (41%), Gaps = 18/305 (5%)
Query: 12 LNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYST 71
+ ++ MQ G P+ +Y++LL +GR D + ++ E+K + D TY+
Sbjct: 337 MGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNT----DPDAATYNI 392
Query: 72 IIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAG 131
+I+VF + ++ + + HDM + + + +I AC GL E A ++ + M
Sbjct: 393 LIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTAND 452
Query: 132 CEPNTQCFNIILHACVEACQYDR---AFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNAT 188
P+++ + ++ A +A Y+ AF H N + +F S + G + +
Sbjct: 453 IVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESE 512
Query: 189 TVPNGFSNSQILSFTERFPFTPTTSTYNTLLKAC--GSDYYHAKALINEMKTVGLSPNQI 246
+ + +S I T+N ++A G + A +M+ P++
Sbjct: 513 AILSRLVDSGI---------PRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDER 563
Query: 247 TWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEM 306
T ++ + V+ E + M + I P ++ Y + V +++ + L EEM
Sbjct: 564 TLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCMMLAVYGKTERWDDVNELLEEM 623
Query: 307 KSCEI 311
S +
Sbjct: 624 LSNRV 628
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 99/393 (25%), Positives = 168/393 (42%), Gaps = 72/393 (18%)
Query: 22 GLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESV------------GRLK------ 63
G PD +Y L+ C GRVD A+D++ + E V GRL
Sbjct: 317 GFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVL 376
Query: 64 ----------LDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAH 113
DV TY+++I + L +AL+V HDMR+ G N +++ L++
Sbjct: 377 SDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCK 436
Query: 114 AGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSW--KG------- 164
G +++A + EM G +PNT FN ++ A + + A F KG
Sbjct: 437 LGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYT 496
Query: 165 -NKMLGSFGEG---------YNSNLKQGSIHNATTVPNGFSNSQILSFTER--------- 205
N ++ E + +G + N T N+ I +F R
Sbjct: 497 FNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTY-----NTLINAFLRRGEIKEARKL 551
Query: 206 -----FPFTPTTS-TYNTLLKAC--GSDYYHAKALINEMKTVGLSPNQITWSILIDICGG 257
F +P TYN+L+K + A++L +M G +P+ I+ +ILI+
Sbjct: 552 VNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCR 611
Query: 258 TENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVT 317
+ VE A+E K M G PD++ + + I + + LT++ ++++ I P+ VT
Sbjct: 612 SGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVT 671
Query: 318 YNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYV 350
+NTL+ K G V + CL + + ++ G+V
Sbjct: 672 FNTLMSWLCKGGFVYDA--CLLLDEGIED-GFV 701
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 91/381 (23%), Positives = 154/381 (40%), Gaps = 77/381 (20%)
Query: 24 KPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQ 83
+P SYN++L+ +A +++ ++ ++ +FT+ ++K F
Sbjct: 179 EPTFKSYNVVLEILVSGNCHKVAANVFYDMLS----RKIPPTLFTFGVVMKAFCAVNEID 234
Query: 84 MALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIIL 143
AL + DM G N+V + +LI++ + V +A+QL EEM L GC P+ + FN ++
Sbjct: 235 SALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVI 294
Query: 144 HACVEACQYDRAFRFFHSWKGNKML--------GSFGEGYNSNLKQGSIHNA-------- 187
+ C++DR + N+ML ++G N K G + A
Sbjct: 295 ---LGLCKFDRINE--AAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIP 349
Query: 188 -------TTVPNGF--------SNSQILSFTERFPFTPTTSTYNTLL------------- 219
T+ +GF + + + + P TYN+L+
Sbjct: 350 KPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLAL 409
Query: 220 --------KACGSDYY----------------HAKALINEMKTVGLSPNQITWSILIDIC 255
K C + Y A ++NEM GL PN + ++ LI
Sbjct: 410 EVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAF 469
Query: 256 GGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNW 315
+ A+EI + M G KPDV + + I E K AL L +M S + N
Sbjct: 470 CKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANT 529
Query: 316 VTYNTLLKARSKYGSVLEVQQ 336
VTYNTL+ A + G + E ++
Sbjct: 530 VTYNTLINAFLRRGEIKEARK 550
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 118/278 (42%), Gaps = 49/278 (17%)
Query: 13 NIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTI 72
N+ M GLKP+ +N L+ A C R+ A ++++E+ K DV+T++++
Sbjct: 445 NVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPR----KGCKPDVYTFNSL 500
Query: 73 IKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGC 132
I + + AL + DM S GV NTV +++LINA G +++A +L EM+ G
Sbjct: 501 ISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGS 560
Query: 133 EPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKML--GSFGEGYNSNL------KQGSI 184
+ +N ++ A + D+A F KML G + N+ + G +
Sbjct: 561 PLDEITYNSLIKGLCRAGEVDKARSLFE-----KMLRDGHAPSNISCNILINGLCRSGMV 615
Query: 185 HNATTVPNGF----SNSQILSF------------------------TERFPFTPTTSTYN 216
A S I++F E P P T T+N
Sbjct: 616 EEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIP--PDTVTFN 673
Query: 217 TLLK-AC-GSDYYHAKALINEMKTVGLSPNQITWSILI 252
TL+ C G Y A L++E G PN TWSIL+
Sbjct: 674 TLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILL 711
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 74/149 (49%), Gaps = 5/149 (3%)
Query: 13 NIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTI 72
++++ M G P S NIL+ C +G V+ A + KE+ S D+ T++++
Sbjct: 585 SLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTP----DIVTFNSL 640
Query: 73 IKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGC 132
I A + L + +++ G+ +TV +++L++ G V A L +E + G
Sbjct: 641 INGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGF 700
Query: 133 EPNTQCFNIILHACVEACQYDRAFRFFHS 161
PN + ++I+L + + DR RF+++
Sbjct: 701 VPNHRTWSILLQSIIPQETLDRR-RFYNA 728
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 104 bits (260), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 138/313 (44%), Gaps = 47/313 (15%)
Query: 14 IYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTII 73
+ MQ G++PD ++N LL C G + A++++ E+ + R++ DVF+Y+T++
Sbjct: 326 FFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNR----RIEQDVFSYNTLL 381
Query: 74 KVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCE 133
+A ++ M + N V++S++I+ A AG ++A+ LF EM G
Sbjct: 382 DAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIA 441
Query: 134 PNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNG 193
+ +N +L + + + A + + S G +K+ +
Sbjct: 442 LDRVSYNTLLSIYTKVGRSEEALDIL------REMASVG------IKKDVV--------- 480
Query: 194 FSNSQILSFTERFPFTPTTSTYNTLLKACGSD--YYHAKALINEMKTVGLSPNQITWSIL 251
TYN LL G Y K + EMK + PN +T+S L
Sbjct: 481 --------------------TYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTL 520
Query: 252 IDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEI 311
ID + A+EI + AG++ DV+ Y+ I ++ A++L +EM I
Sbjct: 521 IDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGI 580
Query: 312 HPNWVTYNTLLKA 324
PN VTYN+++ A
Sbjct: 581 SPNVVTYNSIIDA 593
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 139/290 (47%), Gaps = 20/290 (6%)
Query: 66 VFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGL-VEQAIQLF 124
V+ +S +I + + L + A+ V + M+ G+ N V ++++I+AC G+ +Q + F
Sbjct: 268 VYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFF 327
Query: 125 EEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNL----K 180
+EM G +P+ FN +L C ++ A F N+ + YN+ L K
Sbjct: 328 DEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMT-NRRIEQDVFSYNTLLDAICK 386
Query: 181 QGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLK--ACGSDYYHAKALINEMKT 238
G + A + +I+ P +Y+T++ A + A L EM+
Sbjct: 387 GGQMDLAFEILAQMPVKRIM---------PNVVSYSTVIDGFAKAGRFDEALNLFGEMRY 437
Query: 239 VGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQ 298
+G++ ++++++ L+ I E A++IL+ M GIK DV+ Y + + + +
Sbjct: 438 LGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDE 497
Query: 299 ALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAG 348
++ EMK + PN +TY+TL+ SK G ++ + I+++ + AG
Sbjct: 498 VKKVFTEMKREHVLPNLLTYSTLIDGYSKGGL---YKEAMEIFREFKSAG 544
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 122/277 (44%), Gaps = 47/277 (16%)
Query: 13 NIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTI 72
N++ M N ++ D+ SYN LL A C G++DLA ++ ++ V R+ +V +YST+
Sbjct: 360 NLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMP----VKRIMPNVVSYSTV 415
Query: 73 IKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGC 132
I FA A + AL + +MR G+ L+ V++++L++ G E+A+ + EM G
Sbjct: 416 IDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGI 475
Query: 133 EPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPN 192
+ + +N +L + +YD + F K +L
Sbjct: 476 KKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVL------------------------ 511
Query: 193 GFSNSQILSFTERFPFTPTTSTYNTLLK--ACGSDYYHAKALINEMKTVGLSPNQITWSI 250
P TY+TL+ + G Y A + E K+ GL + + +S
Sbjct: 512 -----------------PNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSA 554
Query: 251 LIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAI 287
LID V A+ ++ M GI P+V+ Y + I
Sbjct: 555 LIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSII 591
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 132/296 (44%), Gaps = 57/296 (19%)
Query: 12 LNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYST 71
L+I + M ++G+K D+ +YN LL G+ D + ++ E+K + L TYST
Sbjct: 464 LDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNL----LTYST 519
Query: 72 IIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAG 131
+I ++ L++ A+++ + +SAG+ + V +S+LI+A GLV A+ L +EM G
Sbjct: 520 LIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEG 579
Query: 132 CEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVP 191
PN +N I+ A + DR+ + N ++P
Sbjct: 580 ISPNVVTYNSIIDAFGRSATMDRSADY--------------------------SNGGSLP 613
Query: 192 NGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKALINEMKTVGLSPNQITWSIL 251
FS+S + + TE + N +++ G L E S N+ T
Sbjct: 614 --FSSSALSALTE--------TEGNRVIQLFGQ-------LTTE------SNNRTT---- 646
Query: 252 IDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMK 307
D G + + +E+ + M IKP+V+ ++ + C +F+ A L EE++
Sbjct: 647 KDCEEGMQELSCILEVFRKMHQLEIKPNVVTFSAILNACSRCNSFEDASMLLEELR 702
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 112/250 (44%), Gaps = 18/250 (7%)
Query: 105 SSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKG 164
S++I+ G V A ++FE G F+ ++ A + ++ A F+S K
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMK- 295
Query: 165 NKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSF---TERFPFTPTTSTYNTLLKA 221
G NL + G Q+ F +R P T+N+LL
Sbjct: 296 -------EYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAV 348
Query: 222 C--GSDYYHAKALINEMKTVGLSPNQITWSILID-ICGGTENVEGAIEILKSMGDAGIKP 278
C G + A+ L +EM + + +++ L+D IC G + ++ A EIL M I P
Sbjct: 349 CSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQ-MDLAFEILAQMPVKRIMP 407
Query: 279 DVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCL 338
+V++Y+T I ++ F +AL L+ EM+ I + V+YNTLL +K G ++ L
Sbjct: 408 NVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVG---RSEEAL 464
Query: 339 AIYQDMQKAG 348
I ++M G
Sbjct: 465 DILREMASVG 474
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 104 bits (260), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 83/345 (24%), Positives = 156/345 (45%), Gaps = 21/345 (6%)
Query: 8 LTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVF 67
++ L + M +G KPD+ + N L+ C++G+ A+ M K +E + +
Sbjct: 174 VSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKE--AEAMLLIDKMVEY--GCQPNAV 229
Query: 68 TYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEM 127
TY ++ V + +A+++ M + L+ V +S +I+ G ++ A LF EM
Sbjct: 230 TYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEM 289
Query: 128 LLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSW---KGNKMLGSFGEGYNSNLKQGSI 184
+ G N +NI++ A ++D + K N + +F +S +K+G +
Sbjct: 290 EMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKL 349
Query: 185 HNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKA-CGSDYY-HAKALINEMKTVGLS 242
A + + I P T TY +L+ C ++ A +++ M + G
Sbjct: 350 REAEELHKEMIHRGI---------APDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCD 400
Query: 243 PNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTL 302
PN T++ILI+ ++ +E+ + M G+ D + Y T I+ E A L
Sbjct: 401 PNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKEL 460
Query: 303 YEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKA 347
++EM S ++ PN VTY LL G E ++ L I++ ++K+
Sbjct: 461 FQEMVSRKVPPNIVTYKILLDGLCDNG---ESEKALEIFEKIEKS 502
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/347 (23%), Positives = 160/347 (46%), Gaps = 29/347 (8%)
Query: 12 LNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYST 71
+ + + M+ +K D Y+I++ C G +D A +++ E++ + + ++ TY+
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEME----MKGITTNIITYNI 303
Query: 72 IIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAG 131
+I F +A W K+ DM +N N V +S LI++ G + +A +L +EM+ G
Sbjct: 304 LIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRG 363
Query: 132 CEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLG-SFGEGYNSNLKQGSIH----- 185
P+T + ++ + D+A N+M+ +G + N++ +I
Sbjct: 364 IAPDTITYTSLIDGFCKENHLDKA---------NQMVDLMVSKGCDPNIRTFNILINGYC 414
Query: 186 NATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKA-CGSDYYH-AKALINEMKTVGLSP 243
A + +G + +S T TYNTL++ C + AK L EM + + P
Sbjct: 415 KANRIDDGLELFRKMSLR---GVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPP 471
Query: 244 NQITWSILID-ICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTL 302
N +T+ IL+D +C E+ E A+EI + + + ++ D+ Y I + A L
Sbjct: 472 NIVTYKILLDGLCDNGES-EKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDL 530
Query: 303 YEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGY 349
+ + + P TYN ++ K G + E + +++ M++ G+
Sbjct: 531 FCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAE---LLFRKMEEDGH 574
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 78/338 (23%), Positives = 142/338 (42%), Gaps = 45/338 (13%)
Query: 8 LTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVD----LAQDMYKELKHLESVGRLK 63
L N++ M+ G+ ++ +YNIL+ C AGR D L +DM K ++
Sbjct: 279 LDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKR--------KIN 330
Query: 64 LDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQL 123
+V T+S +I F + A ++ +M G+ +T+ ++SLI+ +++A Q+
Sbjct: 331 PNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQM 390
Query: 124 FEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFH--SWKG--------NKMLGSFGE 173
+ M+ GC+PN + FNI+++ +A + D F S +G N ++ F E
Sbjct: 391 VDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCE 450
Query: 174 GYNSNLKQGSIHNATT--VP---------------NGFSNS--QILSFTERFPFTPTTST 214
N+ + + VP NG S +I E+
Sbjct: 451 LGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGI 510
Query: 215 YNTLLKAC--GSDYYHAKALINEMKTVGLSPNQITWSILID-ICGGTENVEGAIEILKSM 271
YN ++ S A L + G+ P T++I+I +C E + + + M
Sbjct: 511 YNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAEL-LFRKM 569
Query: 272 GDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSC 309
+ G PD Y I+ + + +++ L EE+K C
Sbjct: 570 EEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRC 607
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 117/245 (47%), Gaps = 16/245 (6%)
Query: 14 IYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTII 73
+ +M + G P++ ++NIL+ C A R+D ++++++ S+ + D TY+T+I
Sbjct: 390 MVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKM----SLRGVVADTVTYNTLI 445
Query: 74 KVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCE 133
+ F + +A ++ +M S V N V + L++ G E+A+++FE++ + E
Sbjct: 446 QGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKME 505
Query: 134 PNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNG 193
+ +NII+H A + D A+ F S +G +K +I G
Sbjct: 506 LDIGIYNIIIHGMCNASKVDDAWDLFCSLP--------LKGVKPGVKTYNIMIGGLCKKG 557
Query: 194 -FSNSQIL-SFTERFPFTPTTSTYNTLLKACGSDYYHAKA--LINEMKTVGLSPNQITWS 249
S +++L E P TYN L++A D K+ LI E+K G S + T
Sbjct: 558 PLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIK 617
Query: 250 ILIDI 254
++ID+
Sbjct: 618 MVIDM 622
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 121/291 (41%), Gaps = 17/291 (5%)
Query: 65 DVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLF 124
+ T+ST+I AL++ M G + + ++L+N +G +A+ L
Sbjct: 157 NTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLI 216
Query: 125 EEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKM---LGSFGEGYNSNLKQ 181
++M+ GC+PN + +L+ ++ Q A + + + + K
Sbjct: 217 DKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKH 276
Query: 182 GSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKA-CGSDYYHAKA-LINEMKTV 239
GS+ NA + N I T TYN L+ C + + A L+ +M
Sbjct: 277 GSLDNAFNLFNEMEMKGI---------TTNIITYNILIGGFCNAGRWDDGAKLLRDMIKR 327
Query: 240 GLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQA 299
++PN +T+S+LID + A E+ K M GI PD I YT+ I + + +A
Sbjct: 328 KINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKA 387
Query: 300 LTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYV 350
+ + M S PN T+N L+ Y + L +++ M G V
Sbjct: 388 NQMVDLMVSKGCDPNIRTFNILING---YCKANRIDDGLELFRKMSLRGVV 435
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 104 bits (260), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 151/333 (45%), Gaps = 17/333 (5%)
Query: 4 NSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLK 63
+SR + +Y+ M G+ P + ++N +L +C AG ++ ++ E+K ++
Sbjct: 215 DSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRN----IE 270
Query: 64 LDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQL 123
TY+ +I F+ + A + DMR +G + +++ LI GL + A +
Sbjct: 271 FSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGV 330
Query: 124 FEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGS 183
+EML AG P T +NI + A + + D A S ++ S+ + +K G
Sbjct: 331 TDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAAPDVV-SYNTLMHGYIKMGK 389
Query: 184 IHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKA-CGS-DYYHAKALINEMKTVGL 241
A+ + + I P+ TYNTL+ C S + A+ L EM T +
Sbjct: 390 FVEASLLFDDLRAGDI---------HPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLI 440
Query: 242 SPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALT 301
P+ IT++ L+ N+ A E+ M GIKPD AYTT + + +A
Sbjct: 441 FPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFR 500
Query: 302 LYEEMKSCEIH-PNWVTYNTLLKARSKYGSVLE 333
L+EEM + + H P+ YN + K G++++
Sbjct: 501 LHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVK 533
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 83/377 (22%), Positives = 151/377 (40%), Gaps = 59/377 (15%)
Query: 18 MQNLGLKPDMTSYNILLKACCVAGRVDLAQDM-----------YKELKH--------LES 58
M N G+ P ++YNI + A C GR+D A+++ Y L H +E+
Sbjct: 334 MLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAAPDVVSYNTLMHGYIKMGKFVEA 393
Query: 59 --------VGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINA 110
G + + TY+T+I ++ + A ++K +M + + + + +++L+
Sbjct: 394 SLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKG 453
Query: 111 CAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGS 170
G + A ++++EML G +P+ + + D+AFR
Sbjct: 454 FVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAP 513
Query: 171 FGEGYNSNLK--------------QGSIHNATTVPNGFSNSQIL-SFTERFPFTPTTSTY 215
YN + Q I VP+ + + ++ + E F + Y
Sbjct: 514 DLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLY 573
Query: 216 NTLLKACGSD---------YYHAKA--------LINEMKTVGLSPNQITWSILIDICGGT 258
+ +L+ Y HAKA EMK G+ PN +T + L+
Sbjct: 574 DEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKA 633
Query: 259 ENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTY 318
N++ A L M + GI P+ +YT I + + +++ + LY+EM EI P+ T+
Sbjct: 634 GNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTH 693
Query: 319 NTLLKARSKYGSVLEVQ 335
L K K EV+
Sbjct: 694 RALFKHLEKDHESREVE 710
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 112/252 (44%), Gaps = 35/252 (13%)
Query: 116 LVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLG---SFG 172
+ E+ + FE+M+ G P+ + NI+L ++ ++A + + + ++ +F
Sbjct: 183 MAEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFN 242
Query: 173 EGYNSNLKQGSIHNATTV-------------------PNGFSNSQILSFTERFP------ 207
+S K G + + NGFS + + RF
Sbjct: 243 TMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRS 302
Query: 208 -FTPTTSTYNTLLKA-CGSDYY-HAKALINEMKTVGLSPNQITWSILIDICGGTENVEGA 264
F T ++N L++ C + A + +EM G+ P T++I I ++ A
Sbjct: 303 GFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDA 362
Query: 265 IEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKA 324
E+L SM PDV++Y T + ++ F +A L++++++ +IHP+ VTYNTL+
Sbjct: 363 RELLSSMA----APDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDG 418
Query: 325 RSKYGSVLEVQQ 336
+ G++ Q+
Sbjct: 419 LCESGNLEGAQR 430
>AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15009605-15012319 FORWARD
LENGTH=904
Length = 904
Score = 104 bits (260), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 79/323 (24%), Positives = 157/323 (48%), Gaps = 14/323 (4%)
Query: 14 IYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTII 73
+Y +++ G+ D ++I+++ AG ++ A + L+ ++ + DV+ + ++
Sbjct: 580 LYLNLKSSGVVLDRIGFSIVVRMYVKAGSLEEACSV---LEIMDEQKDIVPDVYLFRDML 636
Query: 74 KVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCE 133
+++ L + + +R +G++ N ++ +IN CA A +++ FEEM+ G
Sbjct: 637 RIYQKCDLQDKLQHLYYRIRKSGIHWNQEMYNCVINCCARALPLDELSGTFEEMIRYGFT 696
Query: 134 PNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQ-GSIHNATTVPN 192
PNT FN++L +A + + F K + ++ YN+ + G + T + +
Sbjct: 697 PNTVTFNVLLDVYGKAKLFKKVNELFLLAKRHGVVDVIS--YNTIIAAYGKNKDYTNMSS 754
Query: 193 GFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAK--ALINEMKTVGLSPNQITWSI 250
N Q F+ + YNTLL A G D K +++ MK P+ T++I
Sbjct: 755 AIKNMQFDGFS------VSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNI 808
Query: 251 LIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCE 310
+I+I G ++ ++LK + ++G+ PD+ +Y T IK ++A+ L +EM+
Sbjct: 809 MINIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRN 868
Query: 311 IHPNWVTYNTLLKARSKYGSVLE 333
I P+ VTY L+ A + LE
Sbjct: 869 IIPDKVTYTNLVTALRRNDEFLE 891
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 120/279 (43%), Gaps = 22/279 (7%)
Query: 60 GRLKLDVFTYSTIIKVFADAKLWQMALKVK------HDMRSAGVNLNTVAWSSLINACAH 113
G+L + YS I++V + W A + H+ + + NTV I AC
Sbjct: 168 GKLVGNFVAYSLILRVLGRREEWDRAEDLIKELCGFHEFQKSYQVFNTV-----IYACTK 222
Query: 114 AGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRA-FRFFHSWKGNKMLGSFG 172
G V+ A + F ML G PN +++ + + A F F H K + S
Sbjct: 223 KGNVKLASKWFHMMLEFGVRPNVATIGMLMGLYQKNWNVEEAEFAFSHMRKFGIVCES-- 280
Query: 173 EGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSD--YYHAK 230
Y+S + +I+ + + +++ ++ + +L A A+
Sbjct: 281 -AYSSMI---TIYTRLRLYD--KAEEVIDLMKQDRVRLKLENWLVMLNAYSQQGKMELAE 334
Query: 231 ALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVC 290
+++ M+ G SPN I ++ LI G +E A + + + G++PD +Y + I+
Sbjct: 335 SILVSMEAAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGW 394
Query: 291 VESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYG 329
+ N+++A Y+E+K C PN TL+ ++KYG
Sbjct: 395 GRADNYEEAKHYYQELKRCGYKPNSFNLFTLINLQAKYG 433
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/258 (21%), Positives = 107/258 (41%), Gaps = 23/258 (8%)
Query: 100 NTVAWSSLINACAHAGLVEQAIQLFEEML-LAGCEPNTQCFNIILHACVEACQYDRAFRF 158
N VA+S ++ ++A L +E+ + + Q FN +++AC + A ++
Sbjct: 173 NFVAYSLILRVLGRREEWDRAEDLIKELCGFHEFQKSYQVFNTVIYACTKKGNVKLASKW 232
Query: 159 FHSWKGNKMLGSFGE-------GYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPT 211
FH M+ FG G L Q + N FS+ + ++
Sbjct: 233 FH------MMLEFGVRPNVATIGMLMGLYQKN-WNVEEAEFAFSHMRKFGIVCESAYSSM 285
Query: 212 TSTYNTLLKACGSDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSM 271
+ Y L Y A+ +I+ MK + W ++++ +E A IL SM
Sbjct: 286 ITIYTRL-----RLYDKAEEVIDLMKQDRVRLKLENWLVMLNAYSQQGKMELAESILVSM 340
Query: 272 GDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSV 331
AG P++IAY T I + + A L+ + + + P+ +Y ++++ +G
Sbjct: 341 EAAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEG---WGRA 397
Query: 332 LEVQQCLAIYQDMQKAGY 349
++ YQ++++ GY
Sbjct: 398 DNYEEAKHYYQELKRCGY 415
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/351 (24%), Positives = 149/351 (42%), Gaps = 84/351 (23%)
Query: 12 LNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGR-LKLDVFTYS 70
L+++ M+ G+K D+ +Y+ L+ C G+ D M +E+ +GR + DV T+S
Sbjct: 265 LSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREM-----IGRNIIPDVVTFS 319
Query: 71 TIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLA 130
+I VF A ++ ++M + G+ +T+ ++SLI+ + +A Q+F+ M+
Sbjct: 320 ALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSK 379
Query: 131 GCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTV 190
GCEP+ ++I++++ +A + D R F ++
Sbjct: 380 GCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLI---------------------- 417
Query: 191 PNGFSNSQILSFTERFPFTPTTSTYNTL-LKACGSDYYHA-KALINEMKTVGLSPNQITW 248
P T TYNTL L C S +A K L EM + G+ P+ +T+
Sbjct: 418 -------------------PNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTY 458
Query: 249 SILID-ICGGTE----------------------------------NVEGAIEILKSMGD 273
IL+D +C E V+ A + S+ D
Sbjct: 459 GILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSD 518
Query: 274 AGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKA 324
G+KPDV+ Y I + + +A L+ +MK P+ TYN L++A
Sbjct: 519 KGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRA 569
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/332 (24%), Positives = 141/332 (42%), Gaps = 50/332 (15%)
Query: 18 MQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFA 77
M G +PD +Y +L C +G LA D++++++ +K V YS +I
Sbjct: 201 MVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERN----IKASVVQYSIVIDSLC 256
Query: 78 DAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQ 137
+ AL + ++M G+ + V +SSLI + G + ++ EM+ P+
Sbjct: 257 KDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVV 316
Query: 138 CFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNS 197
F+ ++ V K K+L + E YN + +G
Sbjct: 317 TFSALIDVFV---------------KEGKLLEA-KELYNEMITRG--------------- 345
Query: 198 QILSFTERFPFTPTTSTYNTLLKA-CGSDYYH-AKALINEMKTVGLSPNQITWSILIDIC 255
P T TYN+L+ C + H A + + M + G P+ +T+SILI+
Sbjct: 346 ----------IAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSY 395
Query: 256 GGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNW 315
+ V+ + + + + G+ P+ I Y T + +S A L++EM S + P+
Sbjct: 396 CKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSV 455
Query: 316 VTYNTLLKARSKYGSVLEVQQCLAIYQDMQKA 347
VTY LL G E+ + L I++ MQK+
Sbjct: 456 VTYGILLDGLCDNG---ELNKALEIFEKMQKS 484
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 116/253 (45%), Gaps = 32/253 (12%)
Query: 14 IYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTII 73
++ +M + G +PD+ +Y+IL+ + C A RVD +++E+ S L + TY+T++
Sbjct: 372 MFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREI----SSKGLIPNTITYNTLV 427
Query: 74 KVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCE 133
F + A ++ +M S GV + V + L++ G + +A+++FE+M +
Sbjct: 428 LGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMT 487
Query: 134 PNTQCFNIILHACVEACQYDRAFRFFHSW--KG--------NKMLGSFGEGYNSNLKQGS 183
+NII+H A + D A+ F S KG N M+G K+GS
Sbjct: 488 LGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGL-------CKKGS 540
Query: 184 IHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKA--CGSDYYHAKALINEMKTVGL 241
+ A + TP TYN L++A GS + LI EMK G
Sbjct: 541 LSEADMLFRKMKEDGC---------TPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGF 591
Query: 242 SPNQITWSILIDI 254
S + T ++ID+
Sbjct: 592 SADSSTIKMVIDM 604
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 132/282 (46%), Gaps = 18/282 (6%)
Query: 14 IYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTII 73
+Y M G+ PD +YN L+ C + A M+ L + D+ TYS +I
Sbjct: 337 LYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMF----DLMVSKGCEPDIVTYSILI 392
Query: 74 KVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCE 133
+ AK +++ ++ S G+ NT+ +++L+ +G + A +LF+EM+ G
Sbjct: 393 NSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVP 452
Query: 134 PNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNG 193
P+ + I+L + + ++A F + ++M + G G + + G + NA+ V +
Sbjct: 453 PSVVTYGILLDGLCDNGELNKALEIFEKMQKSRM--TLGIGIYNIIIHG-MCNASKVDDA 509
Query: 194 FSNSQILSFTERFPFTPTTSTYNTLLKAC---GSDYYHAKALINEMKTVGLSPNQITWSI 250
+S S +++ P TYN ++ GS A L +MK G +P+ T++I
Sbjct: 510 WS--LFCSLSDK-GVKPDVVTYNVMIGGLCKKGS-LSEADMLFRKMKEDGCTPDDFTYNI 565
Query: 251 LIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVE 292
LI G + ++E+++ M G D ++ IK+ ++
Sbjct: 566 LIRAHLGGSGLISSVELIEEMKVCGFSAD----SSTIKMVID 603
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 99/238 (41%), Gaps = 33/238 (13%)
Query: 117 VEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGN----------- 165
V AI LFE M+ + P FN + A QYD F + N
Sbjct: 51 VNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTI 110
Query: 166 ---------KMLGSF---GEGYNSNLKQGSIHNATTVPNGF----SNSQILSFTERF--- 206
K+L +F G + + +I +T V NGF S+ ++ +R
Sbjct: 111 MINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLV-NGFCLEGRVSEAVALVDRMVEM 169
Query: 207 PFTPTTSTYNTLLKAC--GSDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGA 264
P T +TL+ A LI+ M G P+++T+ +++ + N A
Sbjct: 170 KQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALA 229
Query: 265 IEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLL 322
+++ + M + IK V+ Y+ I + +F AL+L+ EM+ I + VTY++L+
Sbjct: 230 LDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLI 287
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 91/351 (25%), Positives = 164/351 (46%), Gaps = 37/351 (10%)
Query: 12 LNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYST 71
LN+ M+ ++ D+ Y+ ++ + C VD A +++ E+ + ++ DVFTYS+
Sbjct: 225 LNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDN----KGIRPDVFTYSS 280
Query: 72 IIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAG 131
+I + W A ++ DM +N N V ++SLI+A A G + +A +LF+EM+
Sbjct: 281 LISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRS 340
Query: 132 CEPNTQCFNIILHACVEACQYDRAFRFFHSWKG----------NKMLGSF---------G 172
+PN +N +++ + D A + F N ++ F
Sbjct: 341 IDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGM 400
Query: 173 EGYNSNLKQGSIHNA---TTVPNGF------SNSQILSFTERFP--FTPTTSTYNTLLKA 221
E + ++G + N TT+ +GF N+Q++ F + P TYNTLL
Sbjct: 401 ELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMV-FKQMVSDGVHPNIMTYNTLLDG 459
Query: 222 CGSDYYHAKALI--NEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPD 279
+ KA++ ++ + P+ T++I+ + VE ++ S+ G+KPD
Sbjct: 460 LCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPD 519
Query: 280 VIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGS 330
VIAY T I + ++A TL+ +MK P+ TYNTL++A + G
Sbjct: 520 VIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGD 570
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 146/329 (44%), Gaps = 52/329 (15%)
Query: 22 GLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKL 81
G +PD+ +Y ++ C G DLA ++ +++ G+++ DV YST+I +
Sbjct: 200 GCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEK----GKIEADVVIYSTVIDSLCKYRH 255
Query: 82 WQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNI 141
AL + +M + G+ + +SSLI+ + G A +L +ML PN FN
Sbjct: 256 VDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNS 315
Query: 142 ILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILS 201
++ A + + A + F + Q SI
Sbjct: 316 LIDAFAKEGKLIEAEKLF-----------------DEMIQRSID---------------- 342
Query: 202 FTERFPFTPTTSTYNTLLKA-CGSDYY-HAKALINEMKTVGLSPNQITWSILID-ICGGT 258
P TYN+L+ C D A+ + M + P+ +T++ LI+ C
Sbjct: 343 --------PNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAK 394
Query: 259 ENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTY 318
+ V+G +E+ + M G+ + + YTT I ++ + A ++++M S +HPN +TY
Sbjct: 395 KVVDG-MELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTY 453
Query: 319 NTLLKARSKYGSVLEVQQCLAIYQDMQKA 347
NTLL K G ++++ + +++ +QK+
Sbjct: 454 NTLLDGLCKNG---KLEKAMVVFEYLQKS 479
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 73/322 (22%), Positives = 131/322 (40%), Gaps = 20/322 (6%)
Query: 25 PDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQM 84
P + ++ LL A + DL ++++ L + +++TY+ +I
Sbjct: 63 PSIVEFSKLLSAIAKMKKFDLVISFGEKMEILG----VSHNLYTYNIMINCLCRRSQLSF 118
Query: 85 ALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILH 144
AL + M G + V +SL+N H + +A+ L ++M+ G +P+T F ++H
Sbjct: 119 ALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVH 178
Query: 145 ACVEACQYDRAFRFFHSW--KG-NKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILS 201
+ + A KG L ++G N K+G A + N +I
Sbjct: 179 GLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKI-- 236
Query: 202 FTERFPFTPTTSTYNTLLKACGSDYYHAKALIN---EMKTVGLSPNQITWSILIDICGGT 258
Y+T++ + Y H +N EM G+ P+ T+S LI
Sbjct: 237 -------EADVVIYSTVIDSL-CKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNY 288
Query: 259 ENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTY 318
A +L M + I P+V+ + + I + +A L++EM I PN VTY
Sbjct: 289 GRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTY 348
Query: 319 NTLLKARSKYGSVLEVQQCLAI 340
N+L+ + + E QQ +
Sbjct: 349 NSLINGFCMHDRLDEAQQIFTL 370
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/339 (20%), Positives = 147/339 (43%), Gaps = 23/339 (6%)
Query: 18 MQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFA 77
M+ LG+ ++ +YNI++ C ++ A + ++ L + T ++++ F
Sbjct: 91 MEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLG----YGPSIVTLNSLLNGFC 146
Query: 78 DAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQ 137
A+ + M G +TV +++L++ +A+ L E M++ GC+P+
Sbjct: 147 HGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLV 206
Query: 138 CFNIILHACVEACQYDRAFRFFHSWKGNKMLGS---FGEGYNSNLKQGSIHNATTVPNGF 194
+ +++ + + D A + + K+ + +S K + +A +
Sbjct: 207 TYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEM 266
Query: 195 SNSQILSFTERFPFTPTTSTYNTLLKACGSDY---YHAKALINEMKTVGLSPNQITWSIL 251
N I P TY++L+ +C +Y A L+++M ++PN +T++ L
Sbjct: 267 DNKGI---------RPDVFTYSSLI-SCLCNYGRWSDASRLLSDMLERKINPNVVTFNSL 316
Query: 252 IDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEI 311
ID + A ++ M I P+++ Y + I +A ++ M S +
Sbjct: 317 IDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDC 376
Query: 312 HPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYV 350
P+ VTYNTL+ K V++ + +++DM + G V
Sbjct: 377 LPDVVTYNTLINGFCKAKKVVDGME---LFRDMSRRGLV 412
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 91/364 (25%), Positives = 150/364 (41%), Gaps = 42/364 (11%)
Query: 18 MQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFA 77
M G+ PD Y L+ C G + A + E+ + + DV TY+ II F
Sbjct: 342 MIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRD----ITPDVLTYTAIISGFC 397
Query: 78 DAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQ 137
A K+ H+M G+ ++V ++ LIN AG ++ A ++ M+ AGC PN
Sbjct: 398 QIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVV 457
Query: 138 CFNIILHACVEACQYDRAFRFFHS-WKGNKMLGSFGEGYNSNL----KQGSIHNATTVPN 192
+ ++ + D A H WK F YNS + K G+I A +
Sbjct: 458 TYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFT--YNSIVNGLCKSGNIEEAVKLVG 515
Query: 193 GFS----NSQILSFTERFP----------------------FTPTTSTYNTLLKA-CGSD 225
F N+ +++T PT T+N L+ C
Sbjct: 516 EFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHG 575
Query: 226 YYH-AKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYT 284
+ L+N M G++PN T++ L+ N++ A I K M G+ PD Y
Sbjct: 576 MLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYE 635
Query: 285 TAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDM 344
+K +++N K+A L++EMK + TY+ L+K K LE ++ ++ M
Sbjct: 636 NLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEARE---VFDQM 692
Query: 345 QKAG 348
++ G
Sbjct: 693 RREG 696
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/327 (23%), Positives = 146/327 (44%), Gaps = 18/327 (5%)
Query: 17 IMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVF 76
+M+ G PD+ SY+ ++ C G +D ++K ++ ++ G LK + + Y +II +
Sbjct: 271 LMELKGYTPDVISYSTVVNGYCRFGELD---KVWKLIEVMKRKG-LKPNSYIYGSIIGLL 326
Query: 77 ADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNT 136
A + +M G+ +TV +++LI+ G + A + F EM P+
Sbjct: 327 CRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDV 386
Query: 137 QCFNIILHACVEACQYDRAFRFFHSW--KGNKMLG-SFGEGYNSNLKQGSIHNATTVPNG 193
+ I+ + A + FH KG + +F E N K G + +A V N
Sbjct: 387 LTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNH 446
Query: 194 FSNSQILSFTERFPFTPTTSTYNTLLKAC--GSDYYHAKALINEMKTVGLSPNQITWSIL 251
+ +P TY TL+ D A L++EM +GL PN T++ +
Sbjct: 447 MIQAGC---------SPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSI 497
Query: 252 IDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEI 311
++ + N+E A++++ AG+ D + YTT + +S +A + +EM +
Sbjct: 498 VNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGL 557
Query: 312 HPNWVTYNTLLKARSKYGSVLEVQQCL 338
P VT+N L+ +G + + ++ L
Sbjct: 558 QPTIVTFNVLMNGFCLHGMLEDGEKLL 584
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/334 (22%), Positives = 136/334 (40%), Gaps = 53/334 (15%)
Query: 14 IYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLK---LDVFTYS 70
+++ +G+ ++ SYNI++ C GR+ KE HL + LK DV +YS
Sbjct: 233 VFREFPEVGVCWNVASYNIVIHFVCQLGRI-------KEAHHLLLLMELKGYTPDVISYS 285
Query: 71 TIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLA 130
T++ + K+ M+ G+ N+ + S+I + +A + F EM+
Sbjct: 286 TVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQ 345
Query: 131 GCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTV 190
G P+T + ++ +G+ K+G I A+
Sbjct: 346 GILPDTVVYTTLI-----------------------------DGF---CKRGDIRAASKF 373
Query: 191 PNGFSNSQILSFTERFPFTPTTSTYNTLLKA-CG-SDYYHAKALINEMKTVGLSPNQITW 248
+ I TP TY ++ C D A L +EM GL P+ +T+
Sbjct: 374 FYEMHSRDI---------TPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTF 424
Query: 249 SILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKS 308
+ LI+ +++ A + M AG P+V+ YTT I + + A L EM
Sbjct: 425 TELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWK 484
Query: 309 CEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQ 342
+ PN TYN+++ K G++ E + + ++
Sbjct: 485 IGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFE 518
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/302 (21%), Positives = 123/302 (40%), Gaps = 80/302 (26%)
Query: 7 DLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDV 66
DL + M +GL+P++ +YN ++ C +G ++ A + E +
Sbjct: 471 DLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFE------------ 518
Query: 67 FTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEE 126
+AG+N +TV +++L++A +G +++A ++ +E
Sbjct: 519 ---------------------------AAGLNADTVTYTTLMDAYCKSGEMDKAQEILKE 551
Query: 127 MLLAGCEPNTQCFNIILHA-CVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIH 185
ML G +P FN++++ C+ D G K+L N L +G
Sbjct: 552 MLGKGLQPTIVTFNVLMNGFCLHGMLED----------GEKLL-------NWMLAKGIAP 594
Query: 186 NATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKALINEMKTVGLSPNQ 245
NATT NS + + R LKA A A+ +M + G+ P+
Sbjct: 595 NATTF-----NSLVKQYCIR-----------NNLKA-------ATAIYKDMCSRGVGPDG 631
Query: 246 ITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEE 305
T+ L+ N++ A + + M G V Y+ IK ++ K F +A ++++
Sbjct: 632 KTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQ 691
Query: 306 MK 307
M+
Sbjct: 692 MR 693
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 91/226 (40%), Gaps = 17/226 (7%)
Query: 115 GLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRA-----FRFFHSWKGNKMLG 169
GL+ +A ++FE+ML G + N+ L + C Y A FR F
Sbjct: 189 GLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDC-YKTATAIIVFREFP--------- 238
Query: 170 SFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKA-CG-SDYY 227
G +N IH + +L E +TP +Y+T++ C +
Sbjct: 239 EVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELD 298
Query: 228 HAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAI 287
LI MK GL PN + +I + + A E M GI PD + YTT I
Sbjct: 299 KVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLI 358
Query: 288 KVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLE 333
+ + + A + EM S +I P+ +TY ++ + G ++E
Sbjct: 359 DGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVE 404
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 91/364 (25%), Positives = 150/364 (41%), Gaps = 42/364 (11%)
Query: 18 MQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFA 77
M G+ PD Y L+ C G + A + E+ + + DV TY+ II F
Sbjct: 342 MIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRD----ITPDVLTYTAIISGFC 397
Query: 78 DAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQ 137
A K+ H+M G+ ++V ++ LIN AG ++ A ++ M+ AGC PN
Sbjct: 398 QIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVV 457
Query: 138 CFNIILHACVEACQYDRAFRFFHS-WKGNKMLGSFGEGYNSNL----KQGSIHNATTVPN 192
+ ++ + D A H WK F YNS + K G+I A +
Sbjct: 458 TYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFT--YNSIVNGLCKSGNIEEAVKLVG 515
Query: 193 GFS----NSQILSFTERFP----------------------FTPTTSTYNTLLKA-CGSD 225
F N+ +++T PT T+N L+ C
Sbjct: 516 EFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHG 575
Query: 226 YYH-AKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYT 284
+ L+N M G++PN T++ L+ N++ A I K M G+ PD Y
Sbjct: 576 MLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYE 635
Query: 285 TAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDM 344
+K +++N K+A L++EMK + TY+ L+K K LE ++ ++ M
Sbjct: 636 NLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEARE---VFDQM 692
Query: 345 QKAG 348
++ G
Sbjct: 693 RREG 696
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/327 (23%), Positives = 146/327 (44%), Gaps = 18/327 (5%)
Query: 17 IMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVF 76
+M+ G PD+ SY+ ++ C G +D ++K ++ ++ G LK + + Y +II +
Sbjct: 271 LMELKGYTPDVISYSTVVNGYCRFGELD---KVWKLIEVMKRKG-LKPNSYIYGSIIGLL 326
Query: 77 ADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNT 136
A + +M G+ +TV +++LI+ G + A + F EM P+
Sbjct: 327 CRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDV 386
Query: 137 QCFNIILHACVEACQYDRAFRFFHSW--KGNKMLG-SFGEGYNSNLKQGSIHNATTVPNG 193
+ I+ + A + FH KG + +F E N K G + +A V N
Sbjct: 387 LTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNH 446
Query: 194 FSNSQILSFTERFPFTPTTSTYNTLLKAC--GSDYYHAKALINEMKTVGLSPNQITWSIL 251
+ +P TY TL+ D A L++EM +GL PN T++ +
Sbjct: 447 MIQAGC---------SPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSI 497
Query: 252 IDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEI 311
++ + N+E A++++ AG+ D + YTT + +S +A + +EM +
Sbjct: 498 VNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGL 557
Query: 312 HPNWVTYNTLLKARSKYGSVLEVQQCL 338
P VT+N L+ +G + + ++ L
Sbjct: 558 QPTIVTFNVLMNGFCLHGMLEDGEKLL 584
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/334 (22%), Positives = 136/334 (40%), Gaps = 53/334 (15%)
Query: 14 IYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLK---LDVFTYS 70
+++ +G+ ++ SYNI++ C GR+ KE HL + LK DV +YS
Sbjct: 233 VFREFPEVGVCWNVASYNIVIHFVCQLGRI-------KEAHHLLLLMELKGYTPDVISYS 285
Query: 71 TIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLA 130
T++ + K+ M+ G+ N+ + S+I + +A + F EM+
Sbjct: 286 TVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQ 345
Query: 131 GCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTV 190
G P+T + ++ +G+ K+G I A+
Sbjct: 346 GILPDTVVYTTLI-----------------------------DGF---CKRGDIRAASKF 373
Query: 191 PNGFSNSQILSFTERFPFTPTTSTYNTLLKA-CG-SDYYHAKALINEMKTVGLSPNQITW 248
+ I TP TY ++ C D A L +EM GL P+ +T+
Sbjct: 374 FYEMHSRDI---------TPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTF 424
Query: 249 SILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKS 308
+ LI+ +++ A + M AG P+V+ YTT I + + A L EM
Sbjct: 425 TELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWK 484
Query: 309 CEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQ 342
+ PN TYN+++ K G++ E + + ++
Sbjct: 485 IGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFE 518
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/302 (21%), Positives = 123/302 (40%), Gaps = 80/302 (26%)
Query: 7 DLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDV 66
DL + M +GL+P++ +YN ++ C +G ++ A + E +
Sbjct: 471 DLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFE------------ 518
Query: 67 FTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEE 126
+AG+N +TV +++L++A +G +++A ++ +E
Sbjct: 519 ---------------------------AAGLNADTVTYTTLMDAYCKSGEMDKAQEILKE 551
Query: 127 MLLAGCEPNTQCFNIILHA-CVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIH 185
ML G +P FN++++ C+ D G K+L N L +G
Sbjct: 552 MLGKGLQPTIVTFNVLMNGFCLHGMLED----------GEKLL-------NWMLAKGIAP 594
Query: 186 NATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKALINEMKTVGLSPNQ 245
NATT NS + + R LKA A A+ +M + G+ P+
Sbjct: 595 NATTF-----NSLVKQYCIR-----------NNLKA-------ATAIYKDMCSRGVGPDG 631
Query: 246 ITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEE 305
T+ L+ N++ A + + M G V Y+ IK ++ K F +A ++++
Sbjct: 632 KTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQ 691
Query: 306 MK 307
M+
Sbjct: 692 MR 693
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 91/226 (40%), Gaps = 17/226 (7%)
Query: 115 GLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRA-----FRFFHSWKGNKMLG 169
GL+ +A ++FE+ML G + N+ L + C Y A FR F
Sbjct: 189 GLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDC-YKTATAIIVFREFP--------- 238
Query: 170 SFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKA-CG-SDYY 227
G +N IH + +L E +TP +Y+T++ C +
Sbjct: 239 EVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELD 298
Query: 228 HAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAI 287
LI MK GL PN + +I + + A E M GI PD + YTT I
Sbjct: 299 KVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLI 358
Query: 288 KVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLE 333
+ + + A + EM S +I P+ +TY ++ + G ++E
Sbjct: 359 DGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVE 404
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 92/364 (25%), Positives = 150/364 (41%), Gaps = 42/364 (11%)
Query: 18 MQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFA 77
M G++P + +Y+IL+K A R+ D Y LK + G +V Y+ +I F
Sbjct: 321 MVERGMEPTLITYSILVKGLTRAKRIG---DAYFVLKEMTKKG-FPPNVIVYNNLIDSFI 376
Query: 78 DAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQ 137
+A A+++K M S G++L + +++LI G + A +L +EML G N
Sbjct: 377 EAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQG 436
Query: 138 CFNIILHACVEACQYDRAFRFFHSW------KGNKMLGSFGEGYNSNLKQGS-------- 183
F ++ +D A RF G +L + G + K
Sbjct: 437 SFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQF 496
Query: 184 IHNATTVPNGFSNSQILSFTERFPFTPTTS---------------TYNTLLKAC--GSDY 226
++ V SN+ + E +YNTL+ C
Sbjct: 497 LNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKL 556
Query: 227 YHAKALINEMKTVGLSPNQITWSILIDICG--GTENVEGAIEILKSMGDAGIKPDVIAYT 284
A ++EM GL P+ T+SILI CG VE AI+ G+ PDV Y+
Sbjct: 557 DEAFMFLDEMVKRGLKPDNYTYSILI--CGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYS 614
Query: 285 TAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDM 344
I C +++ ++ ++EM S + PN V YN L++A + G + L + +DM
Sbjct: 615 VMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSG---RLSMALELREDM 671
Query: 345 QKAG 348
+ G
Sbjct: 672 KHKG 675
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/350 (23%), Positives = 152/350 (43%), Gaps = 19/350 (5%)
Query: 3 VNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRL 62
+ + L + I +M + GL ++YN L+K C G+ D A+ + KE+ S+G
Sbjct: 376 IEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEML---SIG-F 431
Query: 63 KLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQ 122
++ +++++I + ++ AL+ +M ++ ++LI+ G +A++
Sbjct: 432 NVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALE 491
Query: 123 LFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQG 182
L+ + L G +T+ N +LH EA + D AFR G G + + N
Sbjct: 492 LWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGR---GCVMDRVSYNTLIS 548
Query: 183 SIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACG----SDYYHAKALINEMKT 238
+ F L + P TY+ L+ CG + A ++ K
Sbjct: 549 GCCGKKKLDEAF---MFLDEMVKRGLKPDNYTYSILI--CGLFNMNKVEEAIQFWDDCKR 603
Query: 239 VGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQ 298
G+ P+ T+S++ID C E E E M ++P+ + Y I+ S
Sbjct: 604 NGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSM 663
Query: 299 ALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAG 348
AL L E+MK I PN TY +L+K S + V++ ++++M+ G
Sbjct: 664 ALELREDMKHKGISPNSATYTSLIKGMS---IISRVEEAKLLFEEMRMEG 710
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 126/311 (40%), Gaps = 49/311 (15%)
Query: 26 DMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGR-LKLDVFTYSTIIKVFADAKLWQM 84
D SYN L+ CC ++D A E+ V R LK D +TYS +I + +
Sbjct: 539 DRVSYNTLISGCCGKKKLDEAFMFLDEM-----VKRGLKPDNYTYSILICGLFNMNKVEE 593
Query: 85 ALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILH 144
A++ D + G+ + +S +I+ C A E+ + F+EM+ +PNT +N ++
Sbjct: 594 AIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIR 653
Query: 145 ACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTE 204
A Y R+ R S ++K I
Sbjct: 654 A------YCRSGRL-----------SMALELREDMKHKGI-------------------- 676
Query: 205 RFPFTPTTSTYNTLLKACG--SDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVE 262
+P ++TY +L+K S AK L EM+ GL PN ++ LID G +
Sbjct: 677 ----SPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMV 732
Query: 263 GAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLL 322
+L+ M + P+ I YT I N +A L EM+ I P+ +TY +
Sbjct: 733 KVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFI 792
Query: 323 KARSKYGSVLE 333
K G VLE
Sbjct: 793 YGYLKQGGVLE 803
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 139/334 (41%), Gaps = 52/334 (15%)
Query: 20 NLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGR-LKLDVFTYSTIIKVFAD 78
N G D + N LL C AG++D A + KE+ +GR +D +Y+T+I
Sbjct: 498 NKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEI-----LGRGCVMDRVSYNTLISGCCG 552
Query: 79 AKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQC 138
K A +M G+ + +S LI + VE+AIQ +++ G P+
Sbjct: 553 KKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYT 612
Query: 139 FNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQ 198
+++++ C +A + + FF E + N++
Sbjct: 613 YSVMIDGCCKAERTEEGQEFFD------------EMMSKNVQ------------------ 642
Query: 199 ILSFTERFPFTPTTSTYNTLLKA-CGSDYYH-AKALINEMKTVGLSPNQITWSILIDICG 256
P T YN L++A C S A L +MK G+SPN T++ LI
Sbjct: 643 -----------PNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMS 691
Query: 257 GTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWV 316
VE A + + M G++P+V YT I + + L EM S +HPN +
Sbjct: 692 IISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKI 751
Query: 317 TYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYV 350
TY ++ ++ G+V E + L +M++ G V
Sbjct: 752 TYTVMIGGYARDGNVTEASRLL---NEMREKGIV 782
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 82/342 (23%), Positives = 152/342 (44%), Gaps = 36/342 (10%)
Query: 6 RDLTY-TLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGR-LK 63
RD Y L+++ ++ N G+ P T+ NILL + + A + K + + V + +
Sbjct: 204 RDGCYLALDVFPVLANKGMFPSKTTCNILLTS------LVRANEFQKCCEAFDVVCKGVS 257
Query: 64 LDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQL 123
DV+ ++T I F + A+K+ M AGV N V ++++I+ G ++A
Sbjct: 258 PDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMF 317
Query: 124 FEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSW--KG--------NKMLGSFGE 173
E+M+ G EP ++I++ A + A+ KG N ++ SF
Sbjct: 318 KEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSF-- 375
Query: 174 GYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKA-CGSDYY-HAKA 231
++ GS++ A + + S+ LS T+STYNTL+K C + +A+
Sbjct: 376 -----IEAGSLNKAIEIKD-LMVSKGLSL--------TSSTYNTLIKGYCKNGQADNAER 421
Query: 232 LINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCV 291
L+ EM ++G + NQ +++ +I + + A+ + M + P TT I
Sbjct: 422 LLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLC 481
Query: 292 ESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLE 333
+ +AL L+ + + + T N LL + G + E
Sbjct: 482 KHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDE 523
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 99/234 (42%), Gaps = 16/234 (6%)
Query: 120 AIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHS-WKG-NKMLGSFGEGYNS 177
A+ +F + G P+ NI+L + V A ++ + F KG + + F N+
Sbjct: 210 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCKGVSPDVYLFTTAINA 269
Query: 178 NLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACG--SDYYHAKALINE 235
K G + A ++ S E P T+NT++ G Y A +
Sbjct: 270 FCKGGKVEEAV---------KLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEK 320
Query: 236 MKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKN 295
M G+ P IT+SIL+ + + A +LK M G P+VI Y I +E+ +
Sbjct: 321 MVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGS 380
Query: 296 FKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGY 349
+A+ + + M S + TYNTL+K K G ++ L ++M G+
Sbjct: 381 LNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLL---KEMLSIGF 431
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 92/364 (25%), Positives = 150/364 (41%), Gaps = 42/364 (11%)
Query: 18 MQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFA 77
M G++P + +Y+IL+K A R+ D Y LK + G +V Y+ +I F
Sbjct: 321 MVERGMEPTLITYSILVKGLTRAKRIG---DAYFVLKEMTKKG-FPPNVIVYNNLIDSFI 376
Query: 78 DAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQ 137
+A A+++K M S G++L + +++LI G + A +L +EML G N
Sbjct: 377 EAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQG 436
Query: 138 CFNIILHACVEACQYDRAFRFFHSW------KGNKMLGSFGEGYNSNLKQGS-------- 183
F ++ +D A RF G +L + G + K
Sbjct: 437 SFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQF 496
Query: 184 IHNATTVPNGFSNSQILSFTERFPFTPTTS---------------TYNTLLKAC--GSDY 226
++ V SN+ + E +YNTL+ C
Sbjct: 497 LNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKL 556
Query: 227 YHAKALINEMKTVGLSPNQITWSILIDICG--GTENVEGAIEILKSMGDAGIKPDVIAYT 284
A ++EM GL P+ T+SILI CG VE AI+ G+ PDV Y+
Sbjct: 557 DEAFMFLDEMVKRGLKPDNYTYSILI--CGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYS 614
Query: 285 TAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDM 344
I C +++ ++ ++EM S + PN V YN L++A + G + L + +DM
Sbjct: 615 VMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSG---RLSMALELREDM 671
Query: 345 QKAG 348
+ G
Sbjct: 672 KHKG 675
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/350 (23%), Positives = 152/350 (43%), Gaps = 19/350 (5%)
Query: 3 VNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRL 62
+ + L + I +M + GL ++YN L+K C G+ D A+ + KE+ S+G
Sbjct: 376 IEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEML---SIG-F 431
Query: 63 KLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQ 122
++ +++++I + ++ AL+ +M ++ ++LI+ G +A++
Sbjct: 432 NVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALE 491
Query: 123 LFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQG 182
L+ + L G +T+ N +LH EA + D AFR G G + + N
Sbjct: 492 LWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGR---GCVMDRVSYNTLIS 548
Query: 183 SIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACG----SDYYHAKALINEMKT 238
+ F L + P TY+ L+ CG + A ++ K
Sbjct: 549 GCCGKKKLDEAF---MFLDEMVKRGLKPDNYTYSILI--CGLFNMNKVEEAIQFWDDCKR 603
Query: 239 VGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQ 298
G+ P+ T+S++ID C E E E M ++P+ + Y I+ S
Sbjct: 604 NGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSM 663
Query: 299 ALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAG 348
AL L E+MK I PN TY +L+K S + V++ ++++M+ G
Sbjct: 664 ALELREDMKHKGISPNSATYTSLIKGMS---IISRVEEAKLLFEEMRMEG 710
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 126/311 (40%), Gaps = 49/311 (15%)
Query: 26 DMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGR-LKLDVFTYSTIIKVFADAKLWQM 84
D SYN L+ CC ++D A E+ V R LK D +TYS +I + +
Sbjct: 539 DRVSYNTLISGCCGKKKLDEAFMFLDEM-----VKRGLKPDNYTYSILICGLFNMNKVEE 593
Query: 85 ALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILH 144
A++ D + G+ + +S +I+ C A E+ + F+EM+ +PNT +N ++
Sbjct: 594 AIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIR 653
Query: 145 ACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTE 204
A Y R+ R S ++K I
Sbjct: 654 A------YCRSGRL-----------SMALELREDMKHKGI-------------------- 676
Query: 205 RFPFTPTTSTYNTLLKACG--SDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVE 262
+P ++TY +L+K S AK L EM+ GL PN ++ LID G +
Sbjct: 677 ----SPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMV 732
Query: 263 GAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLL 322
+L+ M + P+ I YT I N +A L EM+ I P+ +TY +
Sbjct: 733 KVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFI 792
Query: 323 KARSKYGSVLE 333
K G VLE
Sbjct: 793 YGYLKQGGVLE 803
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 139/334 (41%), Gaps = 52/334 (15%)
Query: 20 NLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGR-LKLDVFTYSTIIKVFAD 78
N G D + N LL C AG++D A + KE+ +GR +D +Y+T+I
Sbjct: 498 NKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEI-----LGRGCVMDRVSYNTLISGCCG 552
Query: 79 AKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQC 138
K A +M G+ + +S LI + VE+AIQ +++ G P+
Sbjct: 553 KKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYT 612
Query: 139 FNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQ 198
+++++ C +A + + FF E + N++
Sbjct: 613 YSVMIDGCCKAERTEEGQEFFD------------EMMSKNVQ------------------ 642
Query: 199 ILSFTERFPFTPTTSTYNTLLKA-CGSDYYH-AKALINEMKTVGLSPNQITWSILIDICG 256
P T YN L++A C S A L +MK G+SPN T++ LI
Sbjct: 643 -----------PNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMS 691
Query: 257 GTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWV 316
VE A + + M G++P+V YT I + + L EM S +HPN +
Sbjct: 692 IISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKI 751
Query: 317 TYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYV 350
TY ++ ++ G+V E + L +M++ G V
Sbjct: 752 TYTVMIGGYARDGNVTEASRLL---NEMREKGIV 782
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 82/342 (23%), Positives = 152/342 (44%), Gaps = 36/342 (10%)
Query: 6 RDLTY-TLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGR-LK 63
RD Y L+++ ++ N G+ P T+ NILL + + A + K + + V + +
Sbjct: 204 RDGCYLALDVFPVLANKGMFPSKTTCNILLTS------LVRANEFQKCCEAFDVVCKGVS 257
Query: 64 LDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQL 123
DV+ ++T I F + A+K+ M AGV N V ++++I+ G ++A
Sbjct: 258 PDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMF 317
Query: 124 FEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSW--KG--------NKMLGSFGE 173
E+M+ G EP ++I++ A + A+ KG N ++ SF
Sbjct: 318 KEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSF-- 375
Query: 174 GYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKA-CGSDYY-HAKA 231
++ GS++ A + + S+ LS T+STYNTL+K C + +A+
Sbjct: 376 -----IEAGSLNKAIEIKD-LMVSKGLSL--------TSSTYNTLIKGYCKNGQADNAER 421
Query: 232 LINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCV 291
L+ EM ++G + NQ +++ +I + + A+ + M + P TT I
Sbjct: 422 LLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLC 481
Query: 292 ESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLE 333
+ +AL L+ + + + T N LL + G + E
Sbjct: 482 KHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDE 523
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 99/234 (42%), Gaps = 16/234 (6%)
Query: 120 AIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHS-WKG-NKMLGSFGEGYNS 177
A+ +F + G P+ NI+L + V A ++ + F KG + + F N+
Sbjct: 210 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCKGVSPDVYLFTTAINA 269
Query: 178 NLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACG--SDYYHAKALINE 235
K G + A ++ S E P T+NT++ G Y A +
Sbjct: 270 FCKGGKVEEAV---------KLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEK 320
Query: 236 MKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKN 295
M G+ P IT+SIL+ + + A +LK M G P+VI Y I +E+ +
Sbjct: 321 MVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGS 380
Query: 296 FKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGY 349
+A+ + + M S + TYNTL+K K G ++ L ++M G+
Sbjct: 381 LNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLL---KEMLSIGF 431
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/338 (25%), Positives = 155/338 (45%), Gaps = 30/338 (8%)
Query: 4 NSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLK 63
N +++ LN++ M N G++P++ +YN L++ C GR A + ++ +E ++
Sbjct: 268 NYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDM--IER--KIN 323
Query: 64 LDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINA-CAHAGLVEQAIQ 122
+V T+S +I F A K+ +M ++ + +SSLIN C H L ++A
Sbjct: 324 PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL-DEAKH 382
Query: 123 LFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQG 182
+FE M+ C PN +N ++ +A + D F ++G+
Sbjct: 383 MFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGN------------ 430
Query: 183 SIHNATTVPNGF------SNSQILSFTERFP--FTPTTSTYNTLLKA-CGSDYYHAKALI 233
TT+ +GF N+QI+ F + P TY+ LL C + ++
Sbjct: 431 -TVTYTTLIHGFFQARECDNAQIV-FKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVV 488
Query: 234 NE-MKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVE 292
E ++ + P+ T++I+I+ VE ++ S+ G+KP+V+ YTT +
Sbjct: 489 FEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCR 548
Query: 293 SKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGS 330
++A L+ EMK P+ TYNTL++A + G
Sbjct: 549 KGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGD 586
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 78/322 (24%), Positives = 142/322 (44%), Gaps = 32/322 (9%)
Query: 22 GLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKL 81
G +PD+ +Y I++ C G +DLA + K+++ G+++ V Y+TII + K
Sbjct: 216 GCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQ----GKIEPGVVIYNTIIDALCNYKN 271
Query: 82 WQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNI 141
AL + +M + G+ N V ++SLI + G A +L +M+ PN F+
Sbjct: 272 VNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSA 331
Query: 142 ILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQG---SIHNATTVPNGFS-NS 197
++ A V+ + A + Y+ +K+ I +++ NGF +
Sbjct: 332 LIDAFVKEGKLVEAEKL----------------YDEMIKRSIDPDIFTYSSLINGFCMHD 375
Query: 198 QILSFTERFPFT------PTTSTYNTLLKA-CGSDYY-HAKALINEMKTVGLSPNQITWS 249
++ F P TYNTL+K C + L EM GL N +T++
Sbjct: 376 RLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYT 435
Query: 250 ILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSC 309
LI + A + K M G+ PD++ Y+ + + + AL ++E ++
Sbjct: 436 TLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRS 495
Query: 310 EIHPNWVTYNTLLKARSKYGSV 331
++ P+ TYN +++ K G V
Sbjct: 496 KMEPDIYTYNIMIEGMCKAGKV 517
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/362 (22%), Positives = 156/362 (43%), Gaps = 41/362 (11%)
Query: 3 VNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRL 62
+N DL +L + MQNLG+ ++ +Y+IL+ C ++ LA + ++ L
Sbjct: 94 MNKFDLVISLG--EQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLG----Y 147
Query: 63 KLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQ 122
+ D+ T ++++ F A+ + M G ++ +++LI+ +A+
Sbjct: 148 EPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVA 207
Query: 123 LFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQG 182
L + M++ GC+P+ + I+++ + D A ++QG
Sbjct: 208 LVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLL-----------------KKMEQG 250
Query: 183 SIHNATTVPNGF---------SNSQILSFTE--RFPFTPTTSTYNTLLKACGSDY---YH 228
I + N N + FTE P TYN+L++ C +Y
Sbjct: 251 KIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIR-CLCNYGRWSD 309
Query: 229 AKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIK 288
A L+++M ++PN +T+S LID + A ++ M I PD+ Y++ I
Sbjct: 310 ASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLIN 369
Query: 289 VCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAG 348
+A ++E M S + PN VTYNTL+K K V + + ++++M + G
Sbjct: 370 GFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCK---AKRVDEGMELFREMSQRG 426
Query: 349 YV 350
V
Sbjct: 427 LV 428
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/346 (21%), Positives = 144/346 (41%), Gaps = 50/346 (14%)
Query: 3 VNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRL 62
+N L +N++ M P + ++ LL A + DL + +++++L +
Sbjct: 57 LNDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLG----I 112
Query: 63 KLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQ 122
+++TYS +I F +AL V M G + V +SL+N H + A+
Sbjct: 113 SHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVS 172
Query: 123 LFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQG 182
L +M+ G +P++ FN ++H FR
Sbjct: 173 LVGQMVEMGYQPDSFTFNTLIHGL---------FR------------------------- 198
Query: 183 SIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKAC--GSDYYHAKALINEMKTVG 240
HN + + ++ + P TY ++ D A +L+ +M+
Sbjct: 199 --HNRASEAVALVDRMVVKGCQ-----PDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGK 251
Query: 241 LSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQAL 300
+ P + ++ +ID +NV A+ + M + GI+P+V+ Y + I+ + A
Sbjct: 252 IEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDAS 311
Query: 301 TLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQK 346
L +M +I+PN VT++ L+ A K G ++E ++ +Y +M K
Sbjct: 312 RLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEK---LYDEMIK 354
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/358 (25%), Positives = 156/358 (43%), Gaps = 40/358 (11%)
Query: 25 PDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQM 84
P + +N LL A + DL + + +++L R+ D+++Y+ +I F +
Sbjct: 78 PSIVEFNKLLSAIAKMNKFDLVISLGERMQNL----RISYDLYSYNILINCFCRRSQLPL 133
Query: 85 ALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILH 144
AL V M G + V SSL+N H + +A+ L ++M + +PNT FN ++H
Sbjct: 134 ALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIH 193
Query: 145 ACVEACQYDRAFRFFHSW--KG-NKMLGSFGEGYNSNLKQGSIHNA-------------- 187
+ A +G L ++G N K+G I A
Sbjct: 194 GLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEA 253
Query: 188 -----TTVPNGFSNSQILS-----FTE--RFPFTPTTSTYNTLLKACGSDY---YHAKAL 232
TT+ + N + ++ FTE P TYN+L++ C +Y A L
Sbjct: 254 DVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIR-CLCNYGRWSDASRL 312
Query: 233 INEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVE 292
+++M ++PN +T+S LID + A ++ M I PD+ Y++ I
Sbjct: 313 LSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCM 372
Query: 293 SKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYV 350
+A ++E M S + PN VTYNTL+K K V++ + ++++M + G V
Sbjct: 373 HDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCK---AKRVEEGMELFREMSQRGLV 427
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/385 (23%), Positives = 158/385 (41%), Gaps = 87/385 (22%)
Query: 4 NSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLK 63
N +++ LN++ M N G++P++ +YN L++ C GR A + ++ ++
Sbjct: 267 NYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIE----RKIN 322
Query: 64 LDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINA-CAHAGLVEQAIQ 122
+V T+S +I F A K+ +M ++ + +SSLIN C H L ++A
Sbjct: 323 PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL-DEAKH 381
Query: 123 LFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQG 182
+FE M+ C PN +N ++ +A + + F ++G+
Sbjct: 382 MFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGN------------ 429
Query: 183 SIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKAC--GSDYYHAKALINEMKTVG 240
T TYNTL++ D A+ + +M + G
Sbjct: 430 -----------------------------TVTYNTLIQGLFQAGDCDMAQKIFKKMVSDG 460
Query: 241 LSPNQITWSILID-IC--GGTE--------------------------------NVEGAI 265
+ P+ IT+SIL+D +C G E VE
Sbjct: 461 VPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGW 520
Query: 266 EILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKAR 325
++ S+ G+KP+VI YTT I ++A L+ EMK PN TYNTL++AR
Sbjct: 521 DLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRAR 580
Query: 326 SKYGSVLEVQQCLAIYQDMQKAGYV 350
+ G + + ++M+ G+V
Sbjct: 581 LRDG---DKAASAELIKEMRSCGFV 602
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/328 (23%), Positives = 144/328 (43%), Gaps = 50/328 (15%)
Query: 22 GLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKL 81
G +PD+ +Y ++ C G +DLA + K+++ G+++ DV Y+TII + K
Sbjct: 215 GCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEK----GKIEADVVIYTTIIDALCNYKN 270
Query: 82 WQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNI 141
AL + +M + G+ N V ++SLI + G A +L +M+ PN F+
Sbjct: 271 VNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSA 330
Query: 142 ILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILS 201
++ A V K+G + A + + I
Sbjct: 331 LIDAFV--------------------------------KEGKLVEAEKLYDEMIKRSI-- 356
Query: 202 FTERFPFTPTTSTYNTLLKA-CGSDYY-HAKALINEMKTVGLSPNQITWSILIDICGGTE 259
P TY++L+ C D AK + M + PN +T++ LI +
Sbjct: 357 -------DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAK 409
Query: 260 NVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYN 319
VE +E+ + M G+ + + Y T I+ ++ + A ++++M S + P+ +TY+
Sbjct: 410 RVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYS 469
Query: 320 TLLKARSKYGSVLEVQQCLAIYQDMQKA 347
LL KYG ++++ L +++ +QK+
Sbjct: 470 ILLDGLCKYG---KLEKALVVFEYLQKS 494
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 123/276 (44%), Gaps = 12/276 (4%)
Query: 14 IYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTII 73
+Y M + PD+ +Y+ L+ C+ R+D A+ M++ + + +V TY+T+I
Sbjct: 347 LYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFP----NVVTYNTLI 402
Query: 74 KVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCE 133
K F AK + +++ +M G+ NTV +++LI AG + A ++F++M+ G
Sbjct: 403 KGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVP 462
Query: 134 PNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNG 193
P+ ++I+L + + ++A F + +KM Y N+ + A V +G
Sbjct: 463 PDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDI---YTYNIMIEGMCKAGKVEDG 519
Query: 194 FSNSQILSFTERFPFTPTTSTYNTLLKA-CGSDYY-HAKALINEMKTVGLSPNQITWSIL 251
+ LS P Y T++ C A AL EMK G PN T++ L
Sbjct: 520 WDLFCSLSLK---GVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTL 576
Query: 252 IDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAI 287
I + + E++K M G D + I
Sbjct: 577 IRARLRDGDKAASAELIKEMRSCGFVGDASTISMVI 612
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 144/343 (41%), Gaps = 27/343 (7%)
Query: 14 IYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTII 73
IY+ M N PD+ N + AG + + M++E+K R D +YS +I
Sbjct: 504 IYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIK----ARRFVPDARSYSILI 559
Query: 74 KVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCE 133
A ++ + M+ G L+T A++ +I+ G V +A QL EEM G E
Sbjct: 560 HGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFE 619
Query: 134 PNTQCFNIILHACVEACQYDRAFRFFHSWKGNKM------LGSFGEGYNSNLKQGSIHNA 187
P + ++ + + D A+ F K ++ S +G+ K G I A
Sbjct: 620 PTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFG---KVGRIDEA 676
Query: 188 TTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKAC--GSDYYHAKALINEMKTVGLSPNQ 245
IL + TP T+N+LL A + A MK + +PNQ
Sbjct: 677 YL---------ILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQ 727
Query: 246 ITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEE 305
+T+ ILI+ A + M G+KP I+YTT I ++ N +A L++
Sbjct: 728 VTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDR 787
Query: 306 MKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAG 348
K+ P+ YN +++ S ++ +++++ ++ G
Sbjct: 788 FKANGGVPDSACYNAMIEGLSNGNRAMDA---FSLFEETRRRG 827
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/349 (24%), Positives = 148/349 (42%), Gaps = 28/349 (8%)
Query: 3 VNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRL 62
VN D+ TL +Q MQ LG +P + + L++ GRVD A + E+K L
Sbjct: 181 VNHSDMMLTL--FQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKS----SSL 234
Query: 63 KLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQ 122
D+ Y+ I F MA K H++ + G+ + V ++S+I A +++A++
Sbjct: 235 DADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVE 294
Query: 123 LFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNL--- 179
+FE + P T +N ++ A ++D A+ + + S YN L
Sbjct: 295 MFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSV-IAYNCILTCL 353
Query: 180 -KQGSIHNATTVPNGFSNSQILSFTE-RFPFTPTTSTYNTLLKAC--GSDYYHAKALINE 235
K G + A V F E + P STYN L+ A L +
Sbjct: 354 RKMGKVDEALKV-----------FEEMKKDAAPNLSTYNILIDMLCRAGKLDTAFELRDS 402
Query: 236 MKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKN 295
M+ GL PN T +I++D ++ ++ A + + M PD I + + I +
Sbjct: 403 MQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGR 462
Query: 296 FKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDM 344
A +YE+M + N + Y +L+K +G + + IY+DM
Sbjct: 463 VDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHK---IYKDM 508
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 83/372 (22%), Positives = 154/372 (41%), Gaps = 38/372 (10%)
Query: 8 LTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVF 67
L + MQ GL P++ + NI++ C + ++D A M++E+ + D
Sbjct: 393 LDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTP----DEI 448
Query: 68 TYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEM 127
T+ ++I A KV M + N++ ++SLI + G E +++++M
Sbjct: 449 TFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDM 508
Query: 128 LLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKML----------------GSF 171
+ C P+ Q N + +A + ++ F K + + G
Sbjct: 509 INQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFA 568
Query: 172 GEGYN---SNLKQGSIHNATT---VPNGFSNS-------QILSFTERFPFTPTTSTYNTL 218
E Y S +QG + + V +GF Q+L + F PT TY ++
Sbjct: 569 NETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSV 628
Query: 219 LKACG--SDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGI 276
+ A L E K+ + N + +S LID G ++ A IL+ + G+
Sbjct: 629 IDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGL 688
Query: 277 KPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQ 336
P++ + + + V+++ +AL ++ MK + PN VTY L+ K V + +
Sbjct: 689 TPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCK---VRKFNK 745
Query: 337 CLAIYQDMQKAG 348
+Q+MQK G
Sbjct: 746 AFVFWQEMQKQG 757
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/333 (22%), Positives = 130/333 (39%), Gaps = 56/333 (16%)
Query: 11 TLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYS 70
T ++ M+ G D +YNI++ C G+V+ A Y+ L+ +++ G + V TY
Sbjct: 571 TYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKA---YQLLEEMKTKG-FEPTVVTYG 626
Query: 71 TIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLA 130
++I A A + + +S + LN V +SSLI+ G +++A + EE++
Sbjct: 627 SVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQK 686
Query: 131 GCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTV 190
G PN +N +L A V+A + + A F S K K
Sbjct: 687 GLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKC----------------------- 723
Query: 191 PNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKALI--NEMKTVGLSPNQITW 248
TP TY L+ KA + EM+ G+ P+ I++
Sbjct: 724 ------------------TPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISY 765
Query: 249 SILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEM-- 306
+ +I N+ A + G PD Y I+ A +L+EE
Sbjct: 766 TTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRR 825
Query: 307 -------KSCEIHPNWVTYNTLLKARSKYGSVL 332
K+C + + + N L+ + G+VL
Sbjct: 826 RGLPIHNKTCVVLLDTLHKNDCLEQAAIVGAVL 858
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/261 (21%), Positives = 118/261 (45%), Gaps = 33/261 (12%)
Query: 103 AWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQ-CFNIILHACVEACQ----YD---- 153
+++SL+ A + Q+ EM +AG P+ C ++L CV+A + YD
Sbjct: 100 SYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVL-GCVKANKLREGYDVVQM 158
Query: 154 -RAFRFFHSWKG-NKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPT 211
R F+F ++ ++G+F +++++ + F Q L + PT
Sbjct: 159 MRKFKFRPAFSAYTTLIGAFS----------AVNHSDMMLTLFQQMQELGYE------PT 202
Query: 212 TSTYNTLLKACGSD--YYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILK 269
+ TL++ + A +L++EMK+ L + + +++ ID G V+ A +
Sbjct: 203 VHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFH 262
Query: 270 SMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYG 329
+ G+KPD + YT+ I V ++ +A+ ++E ++ P YNT++ YG
Sbjct: 263 EIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMG---YG 319
Query: 330 SVLEVQQCLAIYQDMQKAGYV 350
S + + ++ + + G +
Sbjct: 320 SAGKFDEAYSLLERQRAKGSI 340
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/361 (24%), Positives = 142/361 (39%), Gaps = 76/361 (21%)
Query: 14 IYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTII 73
I++ MQ+ G +P +Y I+LK + A+++++ L E LK D Y +I
Sbjct: 196 IFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLD-EKKSPLKPDQKMYHMMI 254
Query: 74 KVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSL-------------------------- 107
++ A ++ A KV M GV +TV ++SL
Sbjct: 255 YMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQMQRSDIQPDV 314
Query: 108 ------INACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHS 161
I A A E+A+ +FEEML AG P + +NI+L A + ++A F S
Sbjct: 315 VSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKS 374
Query: 162 WKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKA 221
+ +++ P +Y T+L A
Sbjct: 375 MRRDRIF-----------------------------------------PDLWSYTTMLSA 393
Query: 222 C--GSDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPD 279
SD A+ +K G PN +T+ LI +VE +E+ + M +GIK +
Sbjct: 394 YVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKAN 453
Query: 280 VIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLA 339
TT + KNF AL Y+EM+SC + P+ N LL S + E ++
Sbjct: 454 QTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLLSLASTQDELEEAKELTG 513
Query: 340 I 340
I
Sbjct: 514 I 514
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 134/289 (46%), Gaps = 17/289 (5%)
Query: 65 DVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLF 124
+V +Y+ +++ + A + M+S+G + + + ++ ++A ++F
Sbjct: 173 NVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVF 232
Query: 125 EEML---LAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQ 181
E +L + +P+ + ++++++ +A Y++A + F S G + S YNS +
Sbjct: 233 ETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQS-TVTYNSLMSF 291
Query: 182 GSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKAL--INEMKTV 239
+ + S+I +R P +Y L+KA G +AL EM
Sbjct: 292 ETSYKEV--------SKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDA 343
Query: 240 GLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQA 299
G+ P ++IL+D + VE A + KSM I PD+ +YTT + V + + + A
Sbjct: 344 GVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGA 403
Query: 300 LTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAG 348
++ +K PN VTY TL+K Y +V++ + +Y+ M+ +G
Sbjct: 404 EKFFKRIKVDGFEPNIVTYGTLIKG---YAKANDVEKMMEVYEKMRLSG 449
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 78/143 (54%), Gaps = 4/143 (2%)
Query: 4 NSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLK 63
+R L++++ M + G++P +YNILL A ++G V+ A+ ++K ++ R+
Sbjct: 326 RARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRR----DRIF 381
Query: 64 LDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQL 123
D+++Y+T++ + +A + A K ++ G N V + +LI A A VE+ +++
Sbjct: 382 PDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEV 441
Query: 124 FEEMLLAGCEPNTQCFNIILHAC 146
+E+M L+G + N I+ A
Sbjct: 442 YEKMRLSGIKANQTILTTIMDAS 464
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 91/378 (24%), Positives = 175/378 (46%), Gaps = 46/378 (12%)
Query: 7 DLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDV 66
D+ L++ + M+ ++ D+ YN ++ C +D A +++ E+ + ++ DV
Sbjct: 238 DIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDN----KGIRPDV 293
Query: 67 FTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEE 126
FTYS++I + W A ++ DM +N N V +S+LI+A G + +A +L++E
Sbjct: 294 FTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDE 353
Query: 127 MLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSW-------------------KGNKM 167
M+ +P+ ++ +++ C +DR H + KG
Sbjct: 354 MIKRSIDPDIFTYSSLING---FCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCK 410
Query: 168 LGSFGEG---YNSNLKQGSIHNA---TTVPNGF------SNSQILSFTERFPFT--PTTS 213
EG + ++G + N TT+ +GF N+Q++ F + P
Sbjct: 411 AKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV-FKQMVSVGVHPNIL 469
Query: 214 TYNTLLKACGSDYYHAKALI--NEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSM 271
TYN LL + AKA++ ++ + P+ T++I+I+ VE E+ ++
Sbjct: 470 TYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNL 529
Query: 272 GDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSV 331
G+ P+VIAY T I + ++A +L ++MK PN TYNTL++AR + G
Sbjct: 530 SLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDG-- 587
Query: 332 LEVQQCLAIYQDMQKAGY 349
+ + + ++M+ G+
Sbjct: 588 -DREASAELIKEMRSCGF 604
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 78/332 (23%), Positives = 144/332 (43%), Gaps = 50/332 (15%)
Query: 18 MQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFA 77
M G +PD+ +Y ++ C G +DLA + K+++ G+++ DV Y+TII
Sbjct: 214 MVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEK----GKIEADVVIYNTIIDGLC 269
Query: 78 DAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQ 137
K AL + +M + G+ + +SSLI+ + G A +L +M+ PN
Sbjct: 270 KYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVV 329
Query: 138 CFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNS 197
F+ ++ A V K+G + A + +
Sbjct: 330 TFSALIDAFV--------------------------------KEGKLVEAEKLYDEMIKR 357
Query: 198 QILSFTERFPFTPTTSTYNTLLKA-CGSDYY-HAKALINEMKTVGLSPNQITWSILIDIC 255
I P TY++L+ C D AK + M + PN +T+S LI
Sbjct: 358 SI---------DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGF 408
Query: 256 GGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNW 315
+ VE +E+ + M G+ + + YTT I ++++ A ++++M S +HPN
Sbjct: 409 CKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNI 468
Query: 316 VTYNTLLKARSKYGSVLEVQQCLAIYQDMQKA 347
+TYN LL K G ++ + + +++ +Q++
Sbjct: 469 LTYNILLDGLCKNG---KLAKAMVVFEYLQRS 497
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 85/358 (23%), Positives = 151/358 (42%), Gaps = 40/358 (11%)
Query: 25 PDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQM 84
P + +N LL A + +L + ++++ L + D++TYS I F +
Sbjct: 81 PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLG----ISHDLYTYSIFINCFCRRSQLSL 136
Query: 85 ALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILH 144
AL V M G + V SSL+N H+ + A+ L ++M+ G +P+T F ++H
Sbjct: 137 ALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIH 196
Query: 145 ACVEACQYDRAFRFFHSW--KG-NKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILS 201
+ A +G L ++G N K+G I A ++ +I +
Sbjct: 197 GLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEA 256
Query: 202 ------------------------FTE--RFPFTPTTSTYNTLLKACGSDY---YHAKAL 232
FTE P TY++L+ +C +Y A L
Sbjct: 257 DVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLI-SCLCNYGRWSDASRL 315
Query: 233 INEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVE 292
+++M ++PN +T+S LID + A ++ M I PD+ Y++ I
Sbjct: 316 LSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCM 375
Query: 293 SKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYV 350
+A ++E M S + PN VTY+TL+K K V++ + ++++M + G V
Sbjct: 376 HDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCK---AKRVEEGMELFREMSQRGLV 430
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/344 (23%), Positives = 162/344 (47%), Gaps = 15/344 (4%)
Query: 7 DLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDV 66
D+ N+ M+ ++ D+ +N ++ + C VD A +++KE+ E+ G ++ +V
Sbjct: 165 DIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEM---ETKG-IRPNV 220
Query: 67 FTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEE 126
TYS++I W A ++ DM +N N V +++LI+A G +A +L ++
Sbjct: 221 VTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDD 280
Query: 127 MLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHN 186
M+ +P+ +N +++ + D+A + F + YN+ +K
Sbjct: 281 MIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDL-DTYNTLIK--GFCK 337
Query: 187 ATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKAC--GSDYYHAKALINEMKTVGLSPN 244
+ V +G +++ T TY TL++ D +A+ + +M + G+ P+
Sbjct: 338 SKRVEDG---TELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPD 394
Query: 245 QITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYE 304
+T+SIL+D +E A+E+ M + IK D+ YTT I+ ++ L+
Sbjct: 395 IMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFC 454
Query: 305 EMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAG 348
+ + PN VTYNT++ S S +Q+ A+ + M++ G
Sbjct: 455 SLSLKGVKPNVVTYNTMI---SGLCSKRLLQEAYALLKKMKEDG 495
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 131/304 (43%), Gaps = 20/304 (6%)
Query: 25 PDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQM 84
P + +N LL A + DL + ++++ L + +++TY+ +I F +
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLG----ISHNLYTYNILINCFCRRSQISL 63
Query: 85 ALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILH 144
AL + M G + V SSL+N H + A+ L ++M+ G P+T F ++H
Sbjct: 64 ALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIH 123
Query: 145 ACVEACQYDRAFRFFHSW--KG-NKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILS 201
+ A +G L ++G N K+G I A + N ++I
Sbjct: 124 GLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKI-- 181
Query: 202 FTERFPFTPTTSTYNTLLKACGSDYYHAKALIN---EMKTVGLSPNQITWSILIDICGGT 258
+NT++ + Y H +N EM+T G+ PN +T+S LI
Sbjct: 182 -------EADVVIFNTIIDSL-CKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSY 233
Query: 259 ENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTY 318
A ++L M + I P+++ + I V+ F +A L+++M I P+ TY
Sbjct: 234 GRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTY 293
Query: 319 NTLL 322
N+L+
Sbjct: 294 NSLI 297
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/349 (22%), Positives = 148/349 (42%), Gaps = 23/349 (6%)
Query: 7 DLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDV 66
DL +L + MQ LG+ ++ +YNIL+ C ++ LA + ++ L + +
Sbjct: 27 DLVISLG--EKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLG----YEPSI 80
Query: 67 FTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEE 126
T S+++ + K A+ + M G +T+ +++LI+ +A+ L +
Sbjct: 81 VTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDR 140
Query: 127 MLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGS---FGEGYNSNLKQGS 183
M+ GC+PN + ++++ + D AF + + K+ F +S K
Sbjct: 141 MVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRH 200
Query: 184 IHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGS--DYYHAKALINEMKTVGL 241
+ +A + I P TY++L+ S + A L+++M +
Sbjct: 201 VDDALNLFKEMETKGI---------RPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKI 251
Query: 242 SPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALT 301
+PN +T++ LID A ++ M I PD+ Y + I +A
Sbjct: 252 NPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQ 311
Query: 302 LYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYV 350
++E M S + P+ TYNTL+K K V+ ++++M G V
Sbjct: 312 MFEFMVSKDCFPDLDTYNTLIKGFCKSK---RVEDGTELFREMSHRGLV 357
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/297 (21%), Positives = 126/297 (42%), Gaps = 43/297 (14%)
Query: 14 IYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTII 73
++ M + PD+ +YN L+ C+ R+D A+ M++ + + D+ TY+T+I
Sbjct: 277 LHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFP----DLDTYNTLI 332
Query: 74 KVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCE 133
K F +K + ++ +M G+ +TV +++LI H G + A ++F++M+ G
Sbjct: 333 KGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVP 392
Query: 134 PNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNG 193
P+ ++I+L + ++A F + +++ + I+ TT+ G
Sbjct: 393 PDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI-------------KLDIYIYTTMIEG 439
Query: 194 FSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKALINEMKTVGLSPNQITWSILID 253
+ KA D L + G+ PN +T++ +I
Sbjct: 440 ------------------------MCKAGKVD--DGWDLFCSLSLKGVKPNVVTYNTMIS 473
Query: 254 ICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCE 310
++ A +LK M + G PD Y T I+ + + + L EM+SC
Sbjct: 474 GLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCR 530
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/279 (21%), Positives = 118/279 (42%), Gaps = 49/279 (17%)
Query: 66 VFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFE 125
+F ++ ++ A K + + + + M+ G++ N ++ LIN + A+ L
Sbjct: 10 IFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLG 69
Query: 126 EMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIH 185
+M+ G EP+ + +L+ C R I
Sbjct: 70 KMMKLGYEPSIVTLSSLLNG---YCHGKR-----------------------------IS 97
Query: 186 NATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKA-----LINEMKTVG 240
+A + + Q++ R P T T+ TL+ + H KA L++ M G
Sbjct: 98 DAVALVD-----QMVEMGYR----PDTITFTTLIHGL---FLHNKASEAVALVDRMVQRG 145
Query: 241 LSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQAL 300
PN +T+ ++++ +++ A +L M A I+ DV+ + T I + ++ AL
Sbjct: 146 CQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDAL 205
Query: 301 TLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLA 339
L++EM++ I PN VTY++L+ YG + Q L+
Sbjct: 206 NLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLS 244
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 60/124 (48%), Gaps = 4/124 (3%)
Query: 4 NSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLK 63
N+ L L ++ MQ +K D+ Y +++ C AG+VD D++ L S+ +K
Sbjct: 407 NNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSL----SLKGVK 462
Query: 64 LDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQL 123
+V TY+T+I +L Q A + M+ G ++ +++LI A G + +L
Sbjct: 463 PNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAEL 522
Query: 124 FEEM 127
EM
Sbjct: 523 IREM 526
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/361 (24%), Positives = 142/361 (39%), Gaps = 76/361 (21%)
Query: 14 IYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTII 73
I++ MQ+ G +P +Y I+LK + A+++++ L E LK D Y +I
Sbjct: 203 IFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLD-EKKSPLKPDQKMYHMMI 261
Query: 74 KVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSL-------------------------- 107
++ A ++ A KV M GV +TV ++SL
Sbjct: 262 YMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQMQRSDIQPDV 321
Query: 108 ------INACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHS 161
I A A E+A+ +FEEML AG P + +NI+L A + ++A F S
Sbjct: 322 VSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKS 381
Query: 162 WKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKA 221
+ +++ P +Y T+L A
Sbjct: 382 MRRDRIF-----------------------------------------PDLWSYTTMLSA 400
Query: 222 C--GSDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPD 279
SD A+ +K G PN +T+ LI +VE +E+ + M +GIK +
Sbjct: 401 YVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKAN 460
Query: 280 VIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLA 339
TT + KNF AL Y+EM+SC + P+ N LL S + E ++
Sbjct: 461 QTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLLSLASTQDELEEAKELTG 520
Query: 340 I 340
I
Sbjct: 521 I 521
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 134/289 (46%), Gaps = 17/289 (5%)
Query: 65 DVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLF 124
+V +Y+ +++ + A + M+S+G + + + ++ ++A ++F
Sbjct: 180 NVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVF 239
Query: 125 EEML---LAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQ 181
E +L + +P+ + ++++++ +A Y++A + F S G + S YNS +
Sbjct: 240 ETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQS-TVTYNSLMSF 298
Query: 182 GSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKAL--INEMKTV 239
+ + S+I +R P +Y L+KA G +AL EM
Sbjct: 299 ETSYKEV--------SKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDA 350
Query: 240 GLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQA 299
G+ P ++IL+D + VE A + KSM I PD+ +YTT + V + + + A
Sbjct: 351 GVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGA 410
Query: 300 LTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAG 348
++ +K PN VTY TL+K Y +V++ + +Y+ M+ +G
Sbjct: 411 EKFFKRIKVDGFEPNIVTYGTLIKG---YAKANDVEKMMEVYEKMRLSG 456
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 78/143 (54%), Gaps = 4/143 (2%)
Query: 4 NSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLK 63
+R L++++ M + G++P +YNILL A ++G V+ A+ ++K ++ R+
Sbjct: 333 RARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRR----DRIF 388
Query: 64 LDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQL 123
D+++Y+T++ + +A + A K ++ G N V + +LI A A VE+ +++
Sbjct: 389 PDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEV 448
Query: 124 FEEMLLAGCEPNTQCFNIILHAC 146
+E+M L+G + N I+ A
Sbjct: 449 YEKMRLSGIKANQTILTTIMDAS 471
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 145/304 (47%), Gaps = 15/304 (4%)
Query: 12 LNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYST 71
+ ++ M+ G++ D +YN L+ C +GR A + +++ + V +V T++
Sbjct: 194 VELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVP----NVITFTA 249
Query: 72 IIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAG 131
+I VF + A+K+ +M V+ + ++SLIN G V++A Q+ + M+ G
Sbjct: 250 VIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKG 309
Query: 132 CEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVP 191
C P+ +N +++ ++ + D + F ++G YN+ + QG P
Sbjct: 310 CLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGD-TITYNT-IIQGYFQAGR--P 365
Query: 192 NGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKALI--NEMKTVGLSPNQITWS 249
+ + +I S R P TY+ LL ++ KAL+ M+ + + T++
Sbjct: 366 D--AAQEIFS---RMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYN 420
Query: 250 ILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSC 309
I+I NVE A ++ +S+ G+KPDV++YTT I + + ++ LY +M+
Sbjct: 421 IVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQED 480
Query: 310 EIHP 313
+ P
Sbjct: 481 GLLP 484
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 77/322 (23%), Positives = 134/322 (41%), Gaps = 15/322 (4%)
Query: 12 LNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYST 71
L++ M G +PD+ + + L+ C RV A D+ + +E +G + DV Y+T
Sbjct: 124 LSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDL---VSKMEEMG-FRPDVVIYNT 179
Query: 72 IIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAG 131
II L A+++ M GV + V ++SL+ +G A +L +M++
Sbjct: 180 IIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRD 239
Query: 132 CEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVP 191
PN F ++ V+ ++ A + + + + YNS + +H
Sbjct: 240 IVPNVITFTAVIDVFVKEGKFSEAMKLYEEMT-RRCVDPDVFTYNSLINGLCMHGRVD-- 296
Query: 192 NGFSNSQILSFTERFPFTPTTSTYNTLLKA-CGSDYY-HAKALINEMKTVGLSPNQITWS 249
Q+L P TYNTL+ C S L EM GL + IT++
Sbjct: 297 ---EAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYN 353
Query: 250 ILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSC 309
+I + A EI M +P++ Y+ + + ++AL L+E M+
Sbjct: 354 TIIQGYFQAGRPDAAQEIFSRMDS---RPNIRTYSILLYGLCMNWRVEKALVLFENMQKS 410
Query: 310 EIHPNWVTYNTLLKARSKYGSV 331
EI + TYN ++ K G+V
Sbjct: 411 EIELDITTYNIVIHGMCKIGNV 432
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 110/248 (44%), Gaps = 22/248 (8%)
Query: 102 VAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHS 161
V +S +++ A + + I LF M + G + +NI+++ C+ C RF +
Sbjct: 70 VDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVIN-CLCRCS-----RFVIA 123
Query: 162 WKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNS-------QILSFTERFPFTPTTST 214
+ FG + + +++ NGF ++S E F P
Sbjct: 124 LSVVGKMMKFG-------YEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVI 176
Query: 215 YNTLLK-ACGSDYYH-AKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMG 272
YNT++ +C + A L + M+ G+ + +T++ L+ + A +++ M
Sbjct: 177 YNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMV 236
Query: 273 DAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVL 332
I P+VI +T I V V+ F +A+ LYEEM + P+ TYN+L+ +G V
Sbjct: 237 MRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVD 296
Query: 333 EVQQCLAI 340
E +Q L +
Sbjct: 297 EAKQMLDL 304
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 71/328 (21%), Positives = 127/328 (38%), Gaps = 50/328 (15%)
Query: 25 PDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQM 84
P + ++ +L + DL ++ H+E G + D+++Y+ +I + +
Sbjct: 67 PSIVDFSKVLSKIAKSKNYDLVISLFH---HMEVCG-IGHDLYSYNIVINCLCRCSRFVI 122
Query: 85 ALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILH 144
AL V M G + V SSLIN V AI L +M G P+ +N I+
Sbjct: 123 ALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTII- 181
Query: 145 ACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTE 204
+ + K G +++A ++ E
Sbjct: 182 -------------------------------DGSCKIGLVNDAV---------ELFDRME 201
Query: 205 RFPFTPTTSTYNTLLKA--CGSDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVE 262
R TYN+L+ C + A L+ +M + PN IT++ +ID+
Sbjct: 202 RDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFS 261
Query: 263 GAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLL 322
A+++ + M + PDV Y + I +A + + M + P+ VTYNTL+
Sbjct: 262 EAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLI 321
Query: 323 KARSKYGSVLEVQQCLAIYQDMQKAGYV 350
K V E + ++++M + G V
Sbjct: 322 NGFCKSKRVDEGTK---LFREMAQRGLV 346
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/344 (24%), Positives = 162/344 (47%), Gaps = 15/344 (4%)
Query: 7 DLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDV 66
D LN+ M+ ++ D+ +N ++ + C VD A +++KE+ E+ G ++ +V
Sbjct: 240 DTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEM---ETKG-IRPNV 295
Query: 67 FTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEE 126
TYS++I W A ++ DM +N N V +++LI+A G +A +L+++
Sbjct: 296 VTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDD 355
Query: 127 MLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHN 186
M+ +P+ +N +++ + D+A + F YN+ +K
Sbjct: 356 MIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVT-YNTLIK--GFCK 412
Query: 187 ATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKAC--GSDYYHAKALINEMKTVGLSPN 244
+ V +G +++ T TY TL++ D +A+ + +M + G+ P+
Sbjct: 413 SKRVEDG---TELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPD 469
Query: 245 QITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYE 304
+T+SIL+D +E A+E+ M + IK D+ YTT I+ ++ L+
Sbjct: 470 IMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFC 529
Query: 305 EMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAG 348
+ + PN VTYNT++ S S +Q+ A+ + M++ G
Sbjct: 530 SLSLKGVKPNVVTYNTMI---SGLCSKRLLQEAYALLKKMKEDG 570
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/306 (24%), Positives = 130/306 (42%), Gaps = 20/306 (6%)
Query: 25 PDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQM 84
P + +N LL A + D+ + ++++ LE V L +TY+ +I F +
Sbjct: 83 PSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGL----YTYNILINCFCRRSQISL 138
Query: 85 ALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILH 144
AL + M G + V SSL+N H + A+ L ++M+ G P+T F ++H
Sbjct: 139 ALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIH 198
Query: 145 ACVEACQYDRAFRFFHSW--KG-NKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILS 201
+ A +G L ++G N K+G A + N ++I
Sbjct: 199 GLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKI-- 256
Query: 202 FTERFPFTPTTSTYNTLLKACGSDYYHAKALIN---EMKTVGLSPNQITWSILIDICGGT 258
+NT++ + Y H +N EM+T G+ PN +T+S LI
Sbjct: 257 -------EADVVIFNTIIDSL-CKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSY 308
Query: 259 ENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTY 318
A ++L M + I P+++ + I V+ F +A LY++M I P+ TY
Sbjct: 309 GRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTY 368
Query: 319 NTLLKA 324
N+L+
Sbjct: 369 NSLVNG 374
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/297 (21%), Positives = 126/297 (42%), Gaps = 43/297 (14%)
Query: 14 IYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTII 73
+Y M + PD+ +YN L+ C+ R+D A+ M++ + + DV TY+T+I
Sbjct: 352 LYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFP----DVVTYNTLI 407
Query: 74 KVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCE 133
K F +K + ++ +M G+ +TV +++LI H G + A ++F++M+ G
Sbjct: 408 KGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVP 467
Query: 134 PNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNG 193
P+ ++I+L + ++A F + +++ + I+ TT+ G
Sbjct: 468 PDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI-------------KLDIYIYTTMIEG 514
Query: 194 FSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKALINEMKTVGLSPNQITWSILID 253
+ KA D L + G+ PN +T++ +I
Sbjct: 515 ------------------------MCKAGKVD--DGWDLFCSLSLKGVKPNVVTYNTMIS 548
Query: 254 ICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCE 310
++ A +LK M + G P+ Y T I+ + + + L EM+SC
Sbjct: 549 GLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCR 605
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 70/137 (51%), Gaps = 8/137 (5%)
Query: 208 FTPTTSTYNTLLKACGSDYYHAKA-----LINEMKTVGLSPNQITWSILIDICGGTENVE 262
+ P T T+ TL+ + H KA L++ M G PN +T+ ++++ + +
Sbjct: 186 YRPDTITFTTLIHGL---FLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTD 242
Query: 263 GAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLL 322
A+ +L M A I+ DV+ + T I + ++ AL L++EM++ I PN VTY++L+
Sbjct: 243 LALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLI 302
Query: 323 KARSKYGSVLEVQQCLA 339
YG + Q L+
Sbjct: 303 SCLCSYGRWSDASQLLS 319
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 60/124 (48%), Gaps = 4/124 (3%)
Query: 4 NSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLK 63
N+ L L ++ MQ +K D+ Y +++ C AG+VD D++ L S+ +K
Sbjct: 482 NNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSL----SLKGVK 537
Query: 64 LDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQL 123
+V TY+T+I +L Q A + M+ G N+ +++LI A G + +L
Sbjct: 538 PNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAEL 597
Query: 124 FEEM 127
EM
Sbjct: 598 IREM 601
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/346 (23%), Positives = 157/346 (45%), Gaps = 23/346 (6%)
Query: 10 YTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTY 69
Y L + +N+ + P +Y ++K C +G +D A ++ KE+ + +V Y
Sbjct: 402 YELLVEMKKRNIVISP--YTYGTVVKGMCSSGDLDGAYNIVKEM----IASGCRPNVVIY 455
Query: 70 STIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLL 129
+T+IK F + A++V +M+ G+ + ++SLI + A +++A EM+
Sbjct: 456 TTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVE 515
Query: 130 AGCEPNTQCFNIILHACVEACQYDRAFRFFHSWK-----GNKMLGSFGEGYNSNLKQGSI 184
G +PN + + +EA ++ A ++ + NK+L + N K+G +
Sbjct: 516 NGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCT--GLINEYCKKGKV 573
Query: 185 HNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKALINEMKTVGLSPN 244
A + + IL + + T N L K D A+ + EM+ G++P+
Sbjct: 574 IEACSAYRSMVDQGILGDAKTY-----TVLMNGLFKNDKVD--DAEEIFREMRGKGIAPD 626
Query: 245 QITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYE 304
++ +LI+ N++ A I M + G+ P+VI Y + S ++A L +
Sbjct: 627 VFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLD 686
Query: 305 EMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYV 350
EM +HPN VTY T++ K G + E ++ +M+ G V
Sbjct: 687 EMSVKGLHPNAVTYCTIIDGYCKSGDLAE---AFRLFDEMKLKGLV 729
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 85/332 (25%), Positives = 146/332 (43%), Gaps = 22/332 (6%)
Query: 4 NSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLK 63
NSR + + + M+ G+ PD+ YN L+ A R+D A+ E+ LK
Sbjct: 465 NSR-FGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVE----NGLK 519
Query: 64 LDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQL 123
+ FTY I + +A + A K +MR GV N V + LIN G V +A
Sbjct: 520 PNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSA 579
Query: 124 FEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKM---LGSFGEGYNSNLK 180
+ M+ G + + + ++++ + + D A F +G + + S+G N K
Sbjct: 580 YRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSK 639
Query: 181 QGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKA-CGS-DYYHAKALINEMKT 238
G++ A+++ + + TP YN LL C S + AK L++EM
Sbjct: 640 LGNMQKASSIFDEMVEEGL---------TPNVIIYNMLLGGFCRSGEIEKAKELLDEMSV 690
Query: 239 VGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQ 298
GL PN +T+ +ID + ++ A + M G+ PD YTT + C + ++
Sbjct: 691 KGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVER 750
Query: 299 ALTLY-EEMKSCEIHPNWVTYNTLLKARSKYG 329
A+T++ K C + +N L+ K+G
Sbjct: 751 AITIFGTNKKGC--ASSTAPFNALINWVFKFG 780
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 78/337 (23%), Positives = 144/337 (42%), Gaps = 49/337 (14%)
Query: 15 YQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGR-LKLDVFTYSTII 73
Y+ M + G+ D +Y +L+ +VD A+++++E++ G+ + DVF+Y +I
Sbjct: 580 YRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMR-----GKGIAPDVFSYGVLI 634
Query: 74 KVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCE 133
F+ Q A + +M G+ N + ++ L+ +G +E+A +L +EM + G
Sbjct: 635 NGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLH 694
Query: 134 PNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNG 193
PN + I+ ++ AFR F K + VP+
Sbjct: 695 PNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGL----------------------VPDS 732
Query: 194 FSNSQILSFTERF-PFTPTTSTYNTLLKACGSDYYHAKALIN--------EMKTVGLS-- 242
F + ++ R + + T K C S ALIN E+KT L+
Sbjct: 733 FVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRL 792
Query: 243 ----------PNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVE 292
PN +T++I+ID N+E A E+ M +A + P VI YT+ + +
Sbjct: 793 MDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDK 852
Query: 293 SKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYG 329
+ +++E + I P+ + Y+ ++ A K G
Sbjct: 853 MGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEG 889
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 80/332 (24%), Positives = 139/332 (41%), Gaps = 21/332 (6%)
Query: 22 GLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKL 81
GL P +Y++L+ C R++ A+ + L ++S+G + LD TYS +I +
Sbjct: 272 GLVPLKYTYDVLIDGLCKIKRLEDAKSL---LVEMDSLG-VSLDNHTYSLLIDGLLKGRN 327
Query: 82 WQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNI 141
A + H+M S G+N+ + I + G++E+A LF+ M+ +G P Q +
Sbjct: 328 ADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYAS 387
Query: 142 ILHACVEACQYDRAFRFFHSWKGNKMLGS---FGEGYNSNLKQGSIHNATTVPNGFSNSQ 198
++ + + K ++ S +G G + A + S
Sbjct: 388 LIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASG 447
Query: 199 ILSFTERFPFTPTTSTYNTLLKAC--GSDYYHAKALINEMKTVGLSPNQITWSILIDICG 256
P Y TL+K S + A ++ EMK G++P+ ++ LI
Sbjct: 448 C---------RPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLS 498
Query: 257 GTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWV 316
+ ++ A L M + G+KP+ Y I +E+ F A +EM+ C + PN V
Sbjct: 499 KAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKV 558
Query: 317 TYNTLLKARSKYGSVLEVQQCLAIYQDMQKAG 348
L+ K G V+E C A Y+ M G
Sbjct: 559 LCTGLINEYCKKGKVIEA--CSA-YRSMVDQG 587
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 132/300 (44%), Gaps = 19/300 (6%)
Query: 14 IYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTII 73
I++ M+ G+ PD+ SY +L+ G + A ++ E+ L +V Y+ ++
Sbjct: 614 IFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVE----EGLTPNVIIYNMLL 669
Query: 74 KVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCE 133
F + + A ++ +M G++ N V + ++I+ +G + +A +LF+EM L G
Sbjct: 670 GGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLV 729
Query: 134 PNTQCFNIILHACVEACQYDRAFRFFHSWKGN--KMLGSFGEGYNSNLKQGSIHNATTVP 191
P++ + ++ C +RA F + K F N K G T V
Sbjct: 730 PDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVL 789
Query: 192 NGFSNSQILSFTERFPFTPTTSTYNTLLK-ACGS-DYYHAKALINEMKTVGLSPNQITWS 249
N + F + P TYN ++ C + AK L ++M+ L P IT++
Sbjct: 790 NRLMDGSFDRFGK-----PNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYT 844
Query: 250 ILIDICGGTENVEGAIEILKSMGDA---GIKPDVIAYTTAIKVCVESKNFKQALTLYEEM 306
L++ G + + E+ +A GI+PD I Y+ I ++ +AL L ++M
Sbjct: 845 SLLN---GYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQM 901
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 82/357 (22%), Positives = 142/357 (39%), Gaps = 51/357 (14%)
Query: 14 IYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTII 73
++ L L P ++ +LL A R+DL D+YK + V DV TY +I
Sbjct: 173 VFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVV----FDVKTYHMLI 228
Query: 74 --------------------KVFADAKL-WQMALKVKHDMRSAGVNLNTVAWSSLINACA 112
K F A L ALK+K M G+ + LI+
Sbjct: 229 IAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLC 288
Query: 113 HAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFG 172
+E A L EM G + +++++ ++ D A H + S G
Sbjct: 289 KIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHE------MVSHG 342
Query: 173 EGYNSNL---------KQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKA-C 222
+ K+G + A + +G S ++ P Y +L++ C
Sbjct: 343 INIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLI---------PQAQAYASLIEGYC 393
Query: 223 GS-DYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVI 281
+ L+ EMK + + T+ ++ + +++GA I+K M +G +P+V+
Sbjct: 394 REKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVV 453
Query: 282 AYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCL 338
YTT IK +++ F A+ + +EMK I P+ YN+L+ SK + E + L
Sbjct: 454 IYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFL 510
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 143/318 (44%), Gaps = 24/318 (7%)
Query: 22 GLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKL 81
G +PD+ +YN ++ C +G LA D+ ++++ +K DVFTYSTII
Sbjct: 188 GCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERN----VKADVFTYSTIIDSLCRDGC 243
Query: 82 WQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNI 141
A+ + +M + G+ + V ++SL+ AG L ++M+ PN FN+
Sbjct: 244 IDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNV 303
Query: 142 ILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSN-LKQGSIHNATTVPNGFSNS-QI 199
+L V+ + A + G + N + ++ + + N S + +
Sbjct: 304 LLDVFVKEGKLQEANELYKEM--------ITRGISPNIITYNTLMDGYCMQNRLSEANNM 355
Query: 200 LSFTERFPFTPTTSTYNTLLKACGSDYYHAKALINEMKTV------GLSPNQITWSILID 253
L R +P T+ +L+K Y K + + MK GL N +T+SIL+
Sbjct: 356 LDLMVRNKCSPDIVTFTSLIKG----YCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQ 411
Query: 254 ICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHP 313
+ ++ A E+ + M G+ PDV+ Y + ++ ++AL ++E+++ ++
Sbjct: 412 GFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDL 471
Query: 314 NWVTYNTLLKARSKYGSV 331
V Y T+++ K G V
Sbjct: 472 GIVMYTTIIEGMCKGGKV 489
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/378 (23%), Positives = 170/378 (44%), Gaps = 42/378 (11%)
Query: 5 SRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKL 64
S D + L++ + M+ +K D+ +Y+ ++ + C G +D A ++KE+ E+ G +K
Sbjct: 206 SGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEM---ETKG-IKS 261
Query: 65 DVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLF 124
V TY+++++ A W + DM S + N + ++ L++ G +++A +L+
Sbjct: 262 SVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELY 321
Query: 125 EEMLLAGCEPNTQCFNIILHA-CVE----------------ACQYDRAFRFFHSWKGNKM 167
+EM+ G PN +N ++ C++ C D F KG M
Sbjct: 322 KEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPD-IVTFTSLIKGYCM 380
Query: 168 LGSFGEG---YNSNLKQGSIHNATT---VPNGFSNSQILSFTERF-------PFTPTTST 214
+ +G + + K+G + NA T + GF S + E P T
Sbjct: 381 VKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMT 440
Query: 215 YNTLLKACGSDYYHAKAL--INEMKTVGLSPNQITWSILID-ICGGTENVEGAIEILKSM 271
Y LL + KAL +++ + + ++ +I+ +C G + VE A + S+
Sbjct: 441 YGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGK-VEDAWNLFCSL 499
Query: 272 GDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSV 331
G+KP+V+ YT I + + +A L +M+ PN TYNTL++A + G
Sbjct: 500 PCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDG-- 557
Query: 332 LEVQQCLAIYQDMQKAGY 349
++ + ++M+ G+
Sbjct: 558 -DLTASAKLIEEMKSCGF 574
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/332 (21%), Positives = 152/332 (45%), Gaps = 21/332 (6%)
Query: 21 LGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAK 80
LG +PD T++N L+K + G+V A + + + DV TY++I+ +
Sbjct: 152 LGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVE----NGCQPDVVTYNSIVNGICRSG 207
Query: 81 LWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFN 140
+AL + M V + +S++I++ G ++ AI LF+EM G + + +N
Sbjct: 208 DTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYN 267
Query: 141 IILHACVEACQYDRAFRFFHSWKGNKMLG---SFGEGYNSNLKQGSIHNATTVPNGFSNS 197
++ +A +++ +++ +F + +K+G + A +
Sbjct: 268 SLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITR 327
Query: 198 QILSFTERFPFTPTTSTYNTLLKA-CGSDYY-HAKALINEMKTVGLSPNQITWSILIDIC 255
I +P TYNTL+ C + A +++ M SP+ +T++ LI
Sbjct: 328 GI---------SPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGY 378
Query: 256 GGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNW 315
+ V+ +++ +++ G+ + + Y+ ++ +S K A L++EM S + P+
Sbjct: 379 CMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDV 438
Query: 316 VTYNTLLKARSKYGSVLEVQQCLAIYQDMQKA 347
+TY LL G ++++ L I++D+QK+
Sbjct: 439 MTYGILLDGLCDNG---KLEKALEIFEDLQKS 467
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 121/275 (44%), Gaps = 41/275 (14%)
Query: 14 IYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTII 73
+Y+ M G+ P++ +YN L+ C+ R+ A +M L + D+ T++++I
Sbjct: 320 LYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNML----DLMVRNKCSPDIVTFTSLI 375
Query: 74 KVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCE 133
K + K +KV ++ G+ N V +S L+ +G ++ A +LF+EM+ G
Sbjct: 376 KGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVL 435
Query: 134 PNTQCFNIILHACVEACQYDRAFRFFHSWKGNKM-LG-----SFGEGYNSNLKQGSIHNA 187
P+ + I+L + + ++A F + +KM LG + EG K G + +A
Sbjct: 436 PDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGM---CKGGKVEDA 492
Query: 188 ----TTVPNGFSNSQILSFT----------------------ERFPFTPTTSTYNTLLKA 221
++P ++++T E P TYNTL++A
Sbjct: 493 WNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRA 552
Query: 222 --CGSDYYHAKALINEMKTVGLSPNQITWSILIDI 254
D + LI EMK+ G S + + ++ID+
Sbjct: 553 HLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDM 587
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 97/214 (45%), Gaps = 8/214 (3%)
Query: 118 EQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNS 177
+ AI LF+EM+ + P+ F+ A Q++ F + N + + Y
Sbjct: 70 DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNI---YTL 126
Query: 178 NLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKAC--GSDYYHAKALINE 235
N+ +S +L + + P T+T+NTL+K A L++
Sbjct: 127 NIMINCFCRCCKTCFAYS---VLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDR 183
Query: 236 MKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKN 295
M G P+ +T++ +++ + + A+++L+ M + +K DV Y+T I
Sbjct: 184 MVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGC 243
Query: 296 FKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYG 329
A++L++EM++ I + VTYN+L++ K G
Sbjct: 244 IDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAG 277
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 69/141 (48%), Gaps = 5/141 (3%)
Query: 210 PTTSTYNTLLKA-CGS-DYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEI 267
P TYN+++ C S D A L+ +M+ + + T+S +ID ++ AI +
Sbjct: 191 PDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISL 250
Query: 268 LKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSK 327
K M GIK V+ Y + ++ ++ + L ++M S EI PN +T+N LL K
Sbjct: 251 FKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVK 310
Query: 328 YGSVLEVQQCLAIYQDMQKAG 348
G + E + +Y++M G
Sbjct: 311 EGKLQEANE---LYKEMITRG 328
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 151/328 (46%), Gaps = 22/328 (6%)
Query: 23 LKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLW 82
L P++ +Y L+ A C G+VD +D+ ++ LE G + D YS I +
Sbjct: 203 LVPNLVTYTTLVSALCQLGKVDEVRDL---VRRLEDEG-FEFDCVFYSNWIHGYFKGGAL 258
Query: 83 QMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNII 142
AL +M G+N + V++S LI+ + G VE+A+ L +M+ G EPN + I
Sbjct: 259 VDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAI 318
Query: 143 LHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSF 202
+ + + + AF F N++L S G + L I N +L
Sbjct: 319 IRGLCKMGKLEEAFVLF-----NRIL-SVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGD 372
Query: 203 TERFPFTPTTSTYNTLLKA-CGSDYYHAKALINEMKTV--GLSPNQITWSILIDICGGTE 259
E+ P+ TYNT++ C ++E V G+ + IT+S L+D +
Sbjct: 373 MEQRGIQPSILTYNTVINGLC------MAGRVSEADEVSKGVVGDVITYSTLLDSYIKVQ 426
Query: 260 NVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYN 319
N++ +EI + +A I D++ +K + + +A LY M ++ P+ TY
Sbjct: 427 NIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYA 486
Query: 320 TLLKARSKYGSVLEVQQCLAIYQDMQKA 347
T++K K G ++++ L ++ +++K+
Sbjct: 487 TMIKGYCKTG---QIEEALEMFNELRKS 511
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/329 (22%), Positives = 140/329 (42%), Gaps = 42/329 (12%)
Query: 26 DMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMA 85
D+ NILLKA + G A +Y+ + ++ L D TY+T+IK + + A
Sbjct: 446 DLVMCNILLKAFLLMGAYGEADALYRAMPEMD----LTPDTATYATMIKGYCKTGQIEEA 501
Query: 86 LKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHA 145
L++ +++R + V+ V ++ +I+A G+++ A ++ E+ G + +LH+
Sbjct: 502 LEMFNELRKSSVS-AAVCYNRIIDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHS 560
Query: 146 CVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTER 205
H+ G+K G G Y L+Q + + V G N IL +R
Sbjct: 561 -------------IHANGGDK--GILGLVYG--LEQLN----SDVCLGMLNDAILLLCKR 599
Query: 206 FPFTPTTSTY-------------NTLLKACGSDYYHAKA---LINEMKTVGLSPNQITWS 249
F Y +T+LK + A ++N +T S + I ++
Sbjct: 600 GSFEAAIEVYMIMRRKGLTVTFPSTILKTLVDNLRSLDAYLLVVNAGETTLSSMDVIDYT 659
Query: 250 ILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSC 309
I+I+ + A+ + G+ + I Y + I + +AL L++ +++
Sbjct: 660 IIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFDSLENI 719
Query: 310 EIHPNWVTYNTLLKARSKYGSVLEVQQCL 338
+ P+ VTY L+ K G L+ ++ L
Sbjct: 720 GLVPSEVTYGILIDNLCKEGLFLDAEKLL 748
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 65/129 (50%), Gaps = 9/129 (6%)
Query: 226 YYHAKALIN------EMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPD 279
Y+ AL++ EM G++ + +++SILID NVE A+ +L M G++P+
Sbjct: 252 YFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPN 311
Query: 280 VIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLA 339
+I YT I+ + ++A L+ + S I + Y TL+ + G+ + + +
Sbjct: 312 LITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGN---LNRAFS 368
Query: 340 IYQDMQKAG 348
+ DM++ G
Sbjct: 369 MLGDMEQRG 377
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 60/286 (20%), Positives = 109/286 (38%), Gaps = 33/286 (11%)
Query: 67 FTYSTIIKVFADAKLWQMALKVKHDMRSAGVN--LNTVAWSSLINACAHAGLVEQAIQLF 124
T+ ++I F + A++V M + VN + S++I+ G E A+ F
Sbjct: 135 LTFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKIGKPELALGFF 194
Query: 125 EEMLLAGC-EPNTQCFNIILHACVEACQYDR-----------AFRFFHSWKGNKMLGSFG 172
E + +G PN + ++ A + + D F F + N + G F
Sbjct: 195 ESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFK 254
Query: 173 EGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSD--YYHAK 230
G L + + V G + + +Y+ L+ + A
Sbjct: 255 GG---ALVDALMQDREMVEKGMNRDVV--------------SYSILIDGLSKEGNVEEAL 297
Query: 231 ALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVC 290
L+ +M G+ PN IT++ +I +E A + + GI+ D Y T I
Sbjct: 298 GLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGI 357
Query: 291 VESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQ 336
N +A ++ +M+ I P+ +TYNT++ G V E +
Sbjct: 358 CRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADE 403
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 79/346 (22%), Positives = 140/346 (40%), Gaps = 68/346 (19%)
Query: 14 IYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKH------------------ 55
+Y+ M+ G +P++ +YN+LLKA C +VD A+ + E+ +
Sbjct: 168 VYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMC 227
Query: 56 --------LESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSL 107
E R + V Y+ +I ++ A ++ +M G++ N +++S+L
Sbjct: 228 EVGLVKEGRELAERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTL 287
Query: 108 INACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKM 167
IN ++G +E A +ML GC PN + ++ C F W N+M
Sbjct: 288 INVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCF---LRGTTFDALDLW--NQM 342
Query: 168 LGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGS--D 225
+ FG P YNTL++ S +
Sbjct: 343 IRGFG-----------------------------------LQPNVVAYNTLVQGFCSHGN 367
Query: 226 YYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTT 285
A ++ + M+ +G SPN T+ LI+ +++GA+ I M +G P+V+ YT
Sbjct: 368 IVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTN 427
Query: 286 AIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSV 331
++ FK+A +L E M P+ T+N +K G +
Sbjct: 428 MVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRL 473
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 140/311 (45%), Gaps = 13/311 (4%)
Query: 16 QIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKV 75
Q+++ GL+P++ +YN L++ C G + A ++ H+E +G ++ TY ++I
Sbjct: 341 QMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFS---HMEEIG-CSPNIRTYGSLING 396
Query: 76 FADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPN 135
FA A+ + + M ++G N V +++++ A ++A L E M C P+
Sbjct: 397 FAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPS 456
Query: 136 TQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFS 195
FN + +A + D A + F + YN L + N G +
Sbjct: 457 VPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLT 516
Query: 196 NSQILSFTERFPFTPTTSTYNTLLK-ACGSDYYH-AKALINEMKTVGLSPNQITWSILID 253
+ E ++STYNTLL +C + A L+ +M G SP++IT +++I
Sbjct: 517 REIFMRGVEW-----SSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIIL 571
Query: 254 ICGGTENVEGAIEILK--SMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEI 311
E A ++L S G +PDVI+YT I S + + L E M S I
Sbjct: 572 AYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGI 631
Query: 312 HPNWVTYNTLL 322
P+ T++ L+
Sbjct: 632 VPSIATWSVLI 642
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 74/323 (22%), Positives = 150/323 (46%), Gaps = 21/323 (6%)
Query: 29 SYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKV 88
++ ++++ + G+VD Q + +++K L+ D+F ++I V+ L + A+++
Sbjct: 78 TFEVMIRKLAMDGQVDSVQYLLQQMK-LQGF-HCSEDLFI--SVISVYRQVGLAERAVEM 133
Query: 89 KHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVE 148
+ ++ G + + ++ +++ ++ ++ +M G EPN +N++L A +
Sbjct: 134 FYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCK 193
Query: 149 ACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPF 208
+ D A + NK G + + S+ V G ER F
Sbjct: 194 NNKVDGAKKLLVEM-SNK--GCCPDAVSYTTVISSMCEVGLVKEG------RELAER--F 242
Query: 209 TPTTSTYNTLLKA-CGS-DYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIE 266
P S YN L+ C DY A L+ EM G+SPN I++S LI++ + +E A
Sbjct: 243 EPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFS 302
Query: 267 ILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEM-KSCEIHPNWVTYNTLLKAR 325
L M G P++ ++ +K C AL L+ +M + + PN V YNTL++
Sbjct: 303 FLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGF 362
Query: 326 SKYGSVLEVQQCLAIYQDMQKAG 348
+G+++ + ++++ M++ G
Sbjct: 363 CSHGNIV---KAVSVFSHMEEIG 382
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 76/143 (53%), Gaps = 3/143 (2%)
Query: 13 NIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTI 72
++ +IM P + ++N +K C AGR+D A+ +++++ E R ++ TY+ +
Sbjct: 443 SLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQM---EQQHRCPPNIVTYNEL 499
Query: 73 IKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGC 132
+ A A + A + ++ GV ++ +++L++ +AGL A+QL +M++ G
Sbjct: 500 LDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGK 559
Query: 133 EPNTQCFNIILHACVEACQYDRA 155
P+ N+I+ A + + +RA
Sbjct: 560 SPDEITMNMIILAYCKQGKAERA 582
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 75/345 (21%), Positives = 156/345 (45%), Gaps = 21/345 (6%)
Query: 8 LTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVF 67
++ L + M +G KP + + N L+ C+ G+V D + + G + +
Sbjct: 174 VSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKV---SDAVVLIDRMVETG-FQPNEV 229
Query: 68 TYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEM 127
TY ++ V + +A+++ M + L+ V +S +I+ G ++ A LF EM
Sbjct: 230 TYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEM 289
Query: 128 LLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKM---LGSFGEGYNSNLKQGSI 184
+ G + + +N ++ A ++D + K+ + +F +S +K+G +
Sbjct: 290 EIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKL 349
Query: 185 HNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKA-CGSDYYH-AKALINEMKTVGLS 242
A Q+L + P T TYN+L+ C + A +++ M + G
Sbjct: 350 REA---------DQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCD 400
Query: 243 PNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTL 302
P+ +T++ILI+ ++ +E+ + M G+ + + Y T ++ +S + A L
Sbjct: 401 PDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKL 460
Query: 303 YEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKA 347
++EM S + P+ V+Y LL G E+++ L I+ ++K+
Sbjct: 461 FQEMVSRRVRPDIVSYKILLDGLCDNG---ELEKALEIFGKIEKS 502
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 80/333 (24%), Positives = 139/333 (41%), Gaps = 40/333 (12%)
Query: 8 LTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVD----LAQDMYKELKHLESVGRLK 63
L N++ M+ G K D+ +YN L+ C AGR D L +DM K ++
Sbjct: 279 LDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKR--------KIS 330
Query: 64 LDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQL 123
+V T+S +I F + A ++ +M G+ NT+ ++SLI+ +E+AIQ+
Sbjct: 331 PNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQM 390
Query: 124 FEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGS 183
+ M+ GC+P+ FNI+++ +A + D F +G
Sbjct: 391 VDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMS----------------LRGV 434
Query: 184 IHNATT---VPNGFSNSQILSFTERF-------PFTPTTSTYNTLLKACGSDYYHAKAL- 232
I N T + GF S L ++ P +Y LL + KAL
Sbjct: 435 IANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALE 494
Query: 233 -INEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCV 291
+++ + + + I+I V+ A ++ S+ G+K D AY I
Sbjct: 495 IFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELC 554
Query: 292 ESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKA 324
+ +A L+ +M P+ +TYN L++A
Sbjct: 555 RKDSLSKADILFRKMTEEGHAPDELTYNILIRA 587
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/341 (23%), Positives = 147/341 (43%), Gaps = 15/341 (4%)
Query: 6 RDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLD 65
R L+Y + + LG +PD +N LL C+ RV A ++ + + K
Sbjct: 137 RKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGH----KPT 192
Query: 66 VFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFE 125
+ T +T++ A+ + M G N V + ++N +G A++L
Sbjct: 193 LITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLR 252
Query: 126 EMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIH 185
+M + + ++II+ + D AF F+ + + G + N G
Sbjct: 253 KMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEME---IKGFKADIITYNTLIGGFC 309
Query: 186 NATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSD--YYHAKALINEMKTVGLSP 243
NA +G +++L + +P T++ L+ + + A L+ EM G++P
Sbjct: 310 NAGRWDDG---AKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAP 366
Query: 244 NQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLY 303
N IT++ LID +E AI+++ M G PD++ + I ++ L L+
Sbjct: 367 NTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELF 426
Query: 304 EEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDM 344
EM + N VTYNTL++ + G LEV + ++Q+M
Sbjct: 427 REMSLRGVIANTVTYNTLVQGFCQSGK-LEVAK--KLFQEM 464
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/325 (22%), Positives = 130/325 (40%), Gaps = 21/325 (6%)
Query: 29 SYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKV 88
SY L + V + D A D+++++ R V ++ + A K +++ L +
Sbjct: 55 SYRDKLSSGLVGIKADDAVDLFRDMIQ----SRPLPTVIDFNRLFSAIAKTKQYELVLAL 110
Query: 89 KHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVE 148
M S G+ + S +IN + A +++ G EP+T FN +L+
Sbjct: 111 CKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCL 170
Query: 149 ACQYDRAFRFFHSW--KGNK-MLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTER 205
C+ A G+K L + N G + +A + + +
Sbjct: 171 ECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETG------- 223
Query: 206 FPFTPTTSTYNTLLKA-CGSDYYH-AKALINEMKTVGLSPNQITWSILIDICGGTENVEG 263
F P TY +L C S A L+ +M+ + + + +SI+ID +++
Sbjct: 224 --FQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDN 281
Query: 264 AIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLK 323
A + M G K D+I Y T I + + L +M +I PN VT++ L+
Sbjct: 282 AFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLID 341
Query: 324 ARSKYGSVLEVQQCLAIYQDMQKAG 348
+ K G + E Q L ++M + G
Sbjct: 342 SFVKEGKLREADQLL---KEMMQRG 363
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 81/352 (23%), Positives = 151/352 (42%), Gaps = 67/352 (19%)
Query: 25 PDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQM 84
P + +YN++L+ A + D+A ++ E++ L D +TYST+I F ++
Sbjct: 153 PSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRA----LAPDRYTYSTLITSFGKEGMFDS 208
Query: 85 AL----KVKHD-------------------------------MRSAGVNLNTVAWSSLIN 109
AL K++ D ++ +G+ + VA++S+IN
Sbjct: 209 ALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMIN 268
Query: 110 ACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKG----- 164
A L +A L +EM AG PNT ++ +L VE ++ A F K
Sbjct: 269 VYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCAL 328
Query: 165 -----NKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLL 219
N M+ +G+ +K+ ++ + P +YNT+L
Sbjct: 329 DLTTCNIMIDVYGQL--DMVKEA--------------DRLFWSLRKMDIEPNVVSYNTIL 372
Query: 220 KACGSDYYHAKA--LINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIK 277
+ G +A L M+ + N +T++ +I I G T E A +++ M GI+
Sbjct: 373 RVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIE 432
Query: 278 PDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYG 329
P+ I Y+T I + ++ +A TL+++++S + + V Y T++ A + G
Sbjct: 433 PNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVG 484
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 133/320 (41%), Gaps = 47/320 (14%)
Query: 7 DLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDV 66
D + ++I+ ++ G+ PD+ +YN ++ V G+ L ++ +K + G L +
Sbjct: 240 DYSKAISIFSRLKRSGITPDLVAYNSMIN---VYGKAKLFREARLLIKEMNEAGVLP-NT 295
Query: 67 FTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEE 126
+YST++ V+ + + AL V +M+ L+ + +I+ +V++A +LF
Sbjct: 296 VSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWS 355
Query: 127 MLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHN 186
+ EPN +N IL EA FGE +IH
Sbjct: 356 LRKMDIEPNVVSYNTILRVYGEA-------------------ELFGE---------AIH- 386
Query: 187 ATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKA--LINEMKTVGLSPN 244
+ +R TYNT++K G H KA L+ EM++ G+ PN
Sbjct: 387 ------------LFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPN 434
Query: 245 QITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYE 304
IT+S +I I G ++ A + + + +G++ D + Y T I A L
Sbjct: 435 AITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLH 494
Query: 305 EMKSCEIHPNWVTYNTLLKA 324
E+K + P L KA
Sbjct: 495 ELKLPDNIPRETAITILAKA 514
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 74/336 (22%), Positives = 149/336 (44%), Gaps = 19/336 (5%)
Query: 12 LNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYST 71
L+++ M+ + D+T+ NI++ V G++D+ ++ + L + ++ +V +Y+T
Sbjct: 315 LSVFAEMKEVNCALDLTTCNIMID---VYGQLDMVKEADRLFWSLRKMD-IEPNVVSYNT 370
Query: 72 IIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAG 131
I++V+ +A+L+ A+ + M+ + N V ++++I E+A L +EM G
Sbjct: 371 ILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRG 430
Query: 132 CEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVP 191
EPN ++ I+ +A + DRA F L S G + L Q I V
Sbjct: 431 IEPNAITYSTIISIWGKAGKLDRAATLFQK------LRSSGVEIDQVLYQTMIVAYERV- 483
Query: 192 NGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKALINEMKTVGLSPNQITWSIL 251
+++ L + P T T+L G A + + G + + +
Sbjct: 484 GLMGHAKRLLHELKLPDNIPRETAITILAKAGRTE-EATWVFRQAFESGEVKDISVFGCM 542
Query: 252 IDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKS--C 309
I++ + IE+ + M AG PD + + + F++A T+Y EM+ C
Sbjct: 543 INLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREFEKADTVYREMQEEGC 602
Query: 310 EIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQ 345
+ P+ V + L S Y S + + +++Q ++
Sbjct: 603 -VFPDEVHFQML----SLYSSKKDFEMVESLFQRLE 633
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/264 (20%), Positives = 111/264 (42%), Gaps = 66/264 (25%)
Query: 130 AGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKG----------NKMLGSFGEGYNSNL 179
A P+ +N++L + A Q+D A F + + ++ SFG
Sbjct: 149 AKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFG------- 201
Query: 180 KQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGS--DYYHAKALINEMK 237
K+G +A + ++ + Y+ L++ DY A ++ + +K
Sbjct: 202 KEGMFDSALSWLQKMEQDRV---------SGDLVLYSNLIELSRRLCDYSKAISIFSRLK 252
Query: 238 TVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFK 297
G++P+ + ++ +I++ G + A ++K M +AG+ P+ ++Y+T + V VE+ F
Sbjct: 253 RSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFL 312
Query: 298 QALTLYEEMKSC-----------------------------------EIHPNWVTYNTLL 322
+AL+++ EMK +I PN V+YNT+L
Sbjct: 313 EALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTIL 372
Query: 323 KARSKYGSVLEVQQCLAIYQDMQK 346
+ YG + + +++ MQ+
Sbjct: 373 RV---YGEAELFGEAIHLFRLMQR 393
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 83/333 (24%), Positives = 145/333 (43%), Gaps = 24/333 (7%)
Query: 25 PDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQM 84
P + ++ LL A + DL + +++++L + +++TYS I F +
Sbjct: 73 PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLG----ISHNLYTYSIFINYFCRRSQLSL 128
Query: 85 ALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILH 144
AL + M G + V +SL+N H + +A+ L ++M+ G +P+T F ++H
Sbjct: 129 ALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVH 188
Query: 145 ACVEACQYDRAFRFFHSW--KG-NKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILS 201
+ + A KG L ++G N K+G A + N +I
Sbjct: 189 GLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKI-- 246
Query: 202 FTERFPFTPTTSTYNTLLKACGSDYYH---AKALINEMKTVGLSPNQITWSILIDICGGT 258
YNT++ Y H A L N+M+T G+ P+ T++ LI
Sbjct: 247 -------EADVVIYNTIIDGL-CKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNY 298
Query: 259 ENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEM-KSCEIHPNWVT 317
A +L M + I PD++ + I V+ +A LY+EM KS P+ V
Sbjct: 299 GRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVA 358
Query: 318 YNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYV 350
YNTL+K KY V++ + ++++M + G V
Sbjct: 359 YNTLIKGFCKYK---RVEEGMEVFREMSQRGLV 388
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/330 (25%), Positives = 154/330 (46%), Gaps = 29/330 (8%)
Query: 12 LNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYST 71
LN+ M+ ++ D+ YN ++ C +D A D++ ++ E+ G +K DVFTY+
Sbjct: 235 LNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKM---ETKG-IKPDVFTYNP 290
Query: 72 IIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAG 131
+I + W A ++ DM +N + V +++LI+A G + +A +L++EM+ +
Sbjct: 291 LISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSK 350
Query: 132 -CEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTV 190
C P+ +N ++ C+Y R ++ G G + TT+
Sbjct: 351 HCFPDVVAYNTLIKG---FCKYKRVEEGMEVFREMSQRGLVG----------NTVTYTTL 397
Query: 191 PNGF------SNSQILSFTERFP--FTPTTSTYNTLLKA-CGSDYYHAKALINE-MKTVG 240
+GF N+Q++ F + P TYN LL C + ++ E M+
Sbjct: 398 IHGFFQARDCDNAQMV-FKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRD 456
Query: 241 LSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQAL 300
+ + +T++ +I+ VE ++ S+ G+KP+V+ YTT + ++A
Sbjct: 457 MKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEAD 516
Query: 301 TLYEEMKSCEIHPNWVTYNTLLKARSKYGS 330
L+ EMK PN TYNTL++AR + G
Sbjct: 517 ALFVEMKEDGPLPNSGTYNTLIRARLRDGD 546
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 76/329 (23%), Positives = 147/329 (44%), Gaps = 14/329 (4%)
Query: 22 GLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKL 81
G +PD+ +Y ++ C G DLA ++ +++ G+++ DV Y+TII K
Sbjct: 210 GCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEK----GKIEADVVIYNTIIDGLCKYKH 265
Query: 82 WQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNI 141
A + + M + G+ + ++ LI+ + G A +L +ML P+ FN
Sbjct: 266 MDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNA 325
Query: 142 ILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILS 201
++ A V+ + A + + +K YN+ +K V G ++
Sbjct: 326 LIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIK--GFCKYKRVEEGM---EVFR 380
Query: 202 FTERFPFTPTTSTYNTLLKAC--GSDYYHAKALINEMKTVGLSPNQITWSILIDICGGTE 259
+ T TY TL+ D +A+ + +M + G+ P+ +T++IL+D
Sbjct: 381 EMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNG 440
Query: 260 NVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYN 319
NVE A+ + + M +K D++ YTT I+ ++ + L+ + + PN VTY
Sbjct: 441 NVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYT 500
Query: 320 TLLKARSKYGSVLEVQQCLAIYQDMQKAG 348
T++ + G E A++ +M++ G
Sbjct: 501 TMMSGFCRKGLKEEAD---ALFVEMKEDG 526
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 74/141 (52%), Gaps = 4/141 (2%)
Query: 5 SRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKL 64
+RD +++ M + G+ PD+ +YNILL C G V+ A +++ ++ + +KL
Sbjct: 404 ARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRD----MKL 459
Query: 65 DVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLF 124
D+ TY+T+I+ A + + + GV N V ++++++ GL E+A LF
Sbjct: 460 DIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALF 519
Query: 125 EEMLLAGCEPNTQCFNIILHA 145
EM G PN+ +N ++ A
Sbjct: 520 VEMKEDGPLPNSGTYNTLIRA 540
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 78/153 (50%), Gaps = 5/153 (3%)
Query: 4 NSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLK 63
N+ ++ L +++ MQ +K D+ +Y +++A C AG+V+ D++ L S+ +K
Sbjct: 438 NNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSL----SLKGVK 493
Query: 64 LDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQL 123
+V TY+T++ F L + A + +M+ G N+ +++LI A G + +L
Sbjct: 494 PNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAEL 553
Query: 124 FEEMLLAGCEPNTQCFNIILHACVEACQYDRAF 156
+EM G + F ++ + + + D++F
Sbjct: 554 IKEMRSCGFAGDASTFGLVTNMLHDG-RLDKSF 585
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 90/376 (23%), Positives = 171/376 (45%), Gaps = 57/376 (15%)
Query: 5 SRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKL 64
S D+ Y +Y+ M ++P++ ++N+++ A C G+++ A+D+ +++K V
Sbjct: 204 SADVEY---VYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMK----VYGCSP 256
Query: 65 DVFTYSTIIKVF-----------ADAKLWQM---------------------------AL 86
+V +Y+T+I + ADA L +M ++
Sbjct: 257 NVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSM 316
Query: 87 KVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHAC 146
KV +M V N ++++SLIN + G + +AI + ++M+ AG +PN +N +++
Sbjct: 317 KVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGF 376
Query: 147 VEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERF 206
+ A F S KG G+ N+ + + +GF+ + + ER
Sbjct: 377 CKNDMLKEALDMFGSVKGQ---GAVPTTRMYNMLIDAYCKLGKIDDGFALKEEM---ERE 430
Query: 207 PFTPTTSTYNTLLKAC--GSDYYHAKALINEMKTVGLSPNQITWSILID-ICGGTENVEG 263
P TYN L+ + AK L +++ + GL P+ +T+ IL++ C E+ +
Sbjct: 431 GIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKA 489
Query: 264 AIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEM-KSCEIHPNWVTYNTLL 322
A+ +LK M G+KP + Y +K + N K A + +M K + N +YN LL
Sbjct: 490 AM-LLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLL 548
Query: 323 KARSKYGSVLEVQQCL 338
+ S+ G + + L
Sbjct: 549 QGYSQKGKLEDANMLL 564
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/284 (21%), Positives = 115/284 (40%), Gaps = 38/284 (13%)
Query: 4 NSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLK 63
N ++ +++ M + G++P++ +YN L+ C + A DM+ +K +V +
Sbjct: 343 NGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTR 402
Query: 64 LDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQL 123
+ Y+ +I + +K +M G+ + ++ LI G +E A +L
Sbjct: 403 M----YNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKL 458
Query: 124 FEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKM-LGSFGEGYNSNL--- 179
F+++ G P+ F+I++ + +A +KM L YN +
Sbjct: 459 FDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEM--SKMGLKPRHLTYNIVMKGY 515
Query: 180 -KQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACG--SDYYHAKALINEM 236
K+G++ AT + + L ++YN LL+ A L+NEM
Sbjct: 516 CKEGNLKAATNMRTQMEKERRLRM--------NVASYNVLLQGYSQKGKLEDANMLLNEM 567
Query: 237 KTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDV 280
GL PN+IT+ I + + M D G PD+
Sbjct: 568 LEKGLVPNRITYEI----------------VKEEMVDQGFVPDI 595
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 136/313 (43%), Gaps = 51/313 (16%)
Query: 22 GLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKL 81
G KP+ +YN L+ + GR + ++ ++ G + D TY T+I + A A
Sbjct: 389 GCKPNTVTYNRLIHSY---GRANYLKEAMNVFNQMQEAG-CEPDRVTYCTLIDIHAKAGF 444
Query: 82 WQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNI 141
+A+ + M+ AG++ +T +S +IN AG + A +LF EM+ GC PN FNI
Sbjct: 445 LDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNI 504
Query: 142 ILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILS 201
++ +A Y+ A + + + NA
Sbjct: 505 MIALHAKARNYETALKLYRD----------------------MQNAG------------- 529
Query: 202 FTERFPFTPTTSTYNTLLKACGSDYY--HAKALINEMKTVGLSPNQITWSILIDICGGTE 259
F P TY+ +++ G + A+ + EM+ P++ + +L+D+ G
Sbjct: 530 ------FQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAG 583
Query: 260 NVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYN 319
NV+ A + ++M AG++P+V + + + +A L + M + +HP+ TY
Sbjct: 584 NVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYT 643
Query: 320 TLLK----ARSKY 328
LL ARS +
Sbjct: 644 LLLSCCTDARSNF 656
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 142/335 (42%), Gaps = 52/335 (15%)
Query: 16 QIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKV 75
+ + N G + D N +LK ++D + L+ K D TY+T++
Sbjct: 315 EALHNFGFRMDAYQANQVLK------QMDNYANALGFFYWLKRQPGFKHDGHTYTTMVGN 368
Query: 76 FADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPN 135
AK + K+ +M G NTV ++ LI++ A +++A+ +F +M AGCEP+
Sbjct: 369 LGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPD 428
Query: 136 --TQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNG 193
T C I +HA +A D A + + A P+
Sbjct: 429 RVTYCTLIDIHA--KAGFLDIAMDMYQR----------------------MQEAGLSPDT 464
Query: 194 FSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKALINEMKTVGLSPNQITWSILID 253
F+ S I+ N L KA A L EM G +PN +T++I+I
Sbjct: 465 FTYSVII---------------NCLGKA--GHLPAAHRLFCEMVGQGCTPNLVTFNIMIA 507
Query: 254 ICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHP 313
+ N E A+++ + M +AG +PD + Y+ ++V ++A ++ EM+ P
Sbjct: 508 LHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVP 567
Query: 314 NWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAG 348
+ Y L+ K G+V + Q YQ M +AG
Sbjct: 568 DEPVYGLLVDLWGKAGNVDKAWQW---YQAMLQAG 599
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 74/142 (52%), Gaps = 5/142 (3%)
Query: 210 PTTSTYNTLLKACGSDYYHAKAL--INEMKTVGLSPNQITWSILIDICGGTENVEGAIEI 267
P T TYN L+ + G Y +A+ N+M+ G P+++T+ LIDI ++ A+++
Sbjct: 392 PNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDM 451
Query: 268 LKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSK 327
+ M +AG+ PD Y+ I ++ + A L+ EM PN VT+N ++ +K
Sbjct: 452 YQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAK 511
Query: 328 YGSVLEVQQCLAIYQDMQKAGY 349
+ L +Y+DMQ AG+
Sbjct: 512 ---ARNYETALKLYRDMQNAGF 530
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/266 (21%), Positives = 110/266 (41%), Gaps = 58/266 (21%)
Query: 93 RSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQY 152
R G + +++++ A + +L +EM+ GC+PNT +N ++H+ A
Sbjct: 351 RQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYL 410
Query: 153 DRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTT 212
A F N+M + E P
Sbjct: 411 KEAMNVF-----NQMQEAGCE------------------------------------PDR 429
Query: 213 STYNTLLKACGSDYYHAKA--------LINEMKTVGLSPNQITWSILIDICGGTENVEGA 264
TY TL+ HAKA + M+ GLSP+ T+S++I+ G ++ A
Sbjct: 430 VTYCTLID------IHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAA 483
Query: 265 IEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKA 324
+ M G P+++ + I + +++N++ AL LY +M++ P+ VTY+ +++
Sbjct: 484 HRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEV 543
Query: 325 RSKYGSVLEVQQCLAIYQDMQKAGYV 350
G + E + ++ +MQ+ +V
Sbjct: 544 LGHCGFLEEAE---GVFAEMQRKNWV 566
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 87/185 (47%), Gaps = 31/185 (16%)
Query: 8 LTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELK------------- 54
L +N++ MQ G +PD +Y L+ AG +D+A DMY+ ++
Sbjct: 410 LKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSV 469
Query: 55 ---------HLESVGRL---------KLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAG 96
HL + RL ++ T++ +I + A A+ ++ ALK+ DM++AG
Sbjct: 470 IINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAG 529
Query: 97 VNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAF 156
+ V +S ++ H G +E+A +F EM P+ + +++ +A D+A+
Sbjct: 530 FQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAW 589
Query: 157 RFFHS 161
+++ +
Sbjct: 590 QWYQA 594
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 74/157 (47%), Gaps = 5/157 (3%)
Query: 1 MNVNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVG 60
++ +R+ L +Y+ MQN G +PD +Y+I+++ G ++ A+ ++ E++ V
Sbjct: 508 LHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVP 567
Query: 61 RLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQA 120
D Y ++ ++ A A + M AG+ N +SL++ + +A
Sbjct: 568 ----DEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEA 623
Query: 121 IQLFEEMLLAGCEPNTQCFNIILHACVEA-CQYDRAF 156
L + ML G P+ Q + ++L C +A +D F
Sbjct: 624 YNLLQSMLALGLHPSLQTYTLLLSCCTDARSNFDMGF 660
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/346 (23%), Positives = 160/346 (46%), Gaps = 19/346 (5%)
Query: 8 LTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVF 67
++ L+++ + KP ++YN ++ G+ + ++Y E+ + G D
Sbjct: 178 VSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCN---EGDCFPDTI 234
Query: 68 TYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEM 127
TYS +I + A+++ +M+ + +++L+ G VE+A+ LFEEM
Sbjct: 235 TYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEM 294
Query: 128 LLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQ--GSIH 185
AGC P + ++ +A + D A+ F+ + + + +NL G +
Sbjct: 295 KRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVV--FLNNLMNILGKVG 352
Query: 186 NATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKAL---INEMKTVGLS 242
+ N FS + + TPT +YNT++KA H + ++MK +S
Sbjct: 353 RVEELTNVFSEMGM------WRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVS 406
Query: 243 PNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTL 302
P++ T+SILID T VE A+ +L+ M + G P AY + I ++K ++ A L
Sbjct: 407 PSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANEL 466
Query: 303 YEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAG 348
++E+K + + Y ++K +G ++ + + ++ +M+ G
Sbjct: 467 FKELKENFGNVSSRVYAVMIK---HFGKCGKLSEAVDLFNEMKNQG 509
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 85/357 (23%), Positives = 149/357 (41%), Gaps = 60/357 (16%)
Query: 12 LNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKH---------------- 55
L++++ M+ G P + +Y L+K AGRVD A YK++
Sbjct: 288 LDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNI 347
Query: 56 LESVGRLK--LDVFT-------------YSTIIKVFADAKLWQMALKVKHD-MRSAGVNL 99
L VGR++ +VF+ Y+T+IK ++K + D M++ V+
Sbjct: 348 LGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSP 407
Query: 100 NTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFF 159
+ +S LI+ VE+A+ L EEM G P + +++A +A +Y+ A F
Sbjct: 408 SEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELF 467
Query: 160 HSWKGN----------KMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFT 209
K N M+ FG K G + A + N N
Sbjct: 468 KELKENFGNVSSRVYAVMIKHFG-------KCGKLSEAVDLFNEMKNQGS---------G 511
Query: 210 PTTSTYNTLLKAC--GSDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEI 267
P YN L+ A +L+ +M+ G + + +I+++ T AIE+
Sbjct: 512 PDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEM 571
Query: 268 LKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKA 324
+++ +GIKPD + Y T + + F++A + EMK + +TY+++L A
Sbjct: 572 FETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILDA 628
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 77/333 (23%), Positives = 144/333 (43%), Gaps = 26/333 (7%)
Query: 26 DMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMA 85
D ++Y L++ C R L +MY+ ++ + + + S ++K AK+ A
Sbjct: 125 DCSTYMTLIR-CLEEAR--LYGEMYRTIQEVVRNTYVSVSPAVLSELVKALGRAKMVSKA 181
Query: 86 LKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAG-CEPNTQCFNIILH 144
L V + + + ++S+I G E+ +++ EM G C P+T ++ ++
Sbjct: 182 LSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALIS 241
Query: 145 ACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNL-----KQGSIHNATTVPNGFSNSQI 199
+ + + D A R F K N M + E + L K G + A +
Sbjct: 242 SYEKLGRNDSAIRLFDEMKDNCMQPT--EKIYTTLLGIYFKVGKVEKAL---------DL 290
Query: 200 LSFTERFPFTPTTSTYNTLLKACG--SDYYHAKALINEMKTVGLSPNQITWSILIDICGG 257
+R +PT TY L+K G A +M GL+P+ + + L++I G
Sbjct: 291 FEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGK 350
Query: 258 TENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESK-NFKQALTLYEEMKSCEIHPNWV 316
VE + MG P V++Y T IK ESK + + + +++MK+ + P+
Sbjct: 351 VGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEF 410
Query: 317 TYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGY 349
TY+ L+ Y V++ L + ++M + G+
Sbjct: 411 TYSILIDG---YCKTNRVEKALLLLEEMDEKGF 440
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 82/382 (21%), Positives = 149/382 (39%), Gaps = 63/382 (16%)
Query: 12 LNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYST 71
+ ++ M++ ++P Y LL G+V+ A D+++E+K V+TY+
Sbjct: 253 IRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKR----AGCSPTVYTYTE 308
Query: 72 IIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAG 131
+IK A A DM G+ + V ++L+N G VE+ +F EM +
Sbjct: 309 LIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWR 368
Query: 132 CEPNTQCFNIILHACVEA-CQYDRAFRFFHSWKGNKMLGS------FGEGYNSNLKQGSI 184
C P +N ++ A E+ +F K + + S +GY K +
Sbjct: 369 CTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGY---CKTNRV 425
Query: 185 HNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGS--DYYHAKALINEMKTVGLS 242
A +L + F P + Y +L+ A G Y A L E+K +
Sbjct: 426 EKALL---------LLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGN 476
Query: 243 PNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAI--------------- 287
+ ++++I G + A+++ M + G PDV AY +
Sbjct: 477 VSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSL 536
Query: 288 ---------KVCVESKNF-----------KQALTLYEEMKSCEIHPNWVTYNTLLKARSK 327
+ + S N ++A+ ++E +K I P+ VTYNTLL +
Sbjct: 537 LRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAH 596
Query: 328 YGSVLEVQQCLAIYQDMQKAGY 349
G E + + ++M+ G+
Sbjct: 597 AGMFEEAARMM---REMKDKGF 615
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 102/245 (41%), Gaps = 47/245 (19%)
Query: 18 MQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFA 77
M G P +Y L+ A A R + A +++KELK E+ G + V Y+ +IK F
Sbjct: 435 MDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELK--ENFGNVSSRV--YAVMIKHFG 490
Query: 78 DAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQ 137
A+ + ++M++ G + A+++L++ AG++ +A L +M GC +
Sbjct: 491 KCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADIN 550
Query: 138 CFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNS 197
NIIL+ RA F + K +S +K P+G
Sbjct: 551 SHNIILNGFARTGVPRRAIEMFETIK------------HSGIK----------PDGV--- 585
Query: 198 QILSFTERFPFTPTTSTYNTLLK--ACGSDYYHAKALINEMKTVGLSPNQITWSILIDIC 255
TYNTLL A + A ++ EMK G + IT+S ++D
Sbjct: 586 ----------------TYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILDAV 629
Query: 256 GGTEN 260
G ++
Sbjct: 630 GNVDH 634
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 77/138 (55%), Gaps = 4/138 (2%)
Query: 8 LTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVF 67
L+ ++++ M+N G PD+ +YN L+ AG ++ A + L+ +E G + D+
Sbjct: 495 LSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSL---LRKMEENG-CRADIN 550
Query: 68 TYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEM 127
+++ I+ FA + + A+++ ++ +G+ + V +++L+ AHAG+ E+A ++ EM
Sbjct: 551 SHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREM 610
Query: 128 LLAGCEPNTQCFNIILHA 145
G E + ++ IL A
Sbjct: 611 KDKGFEYDAITYSSILDA 628
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 136/317 (42%), Gaps = 49/317 (15%)
Query: 14 IYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTII 73
+ + M+ +GL PD SYNIL++ C G +++A E+ V +TY+T+I
Sbjct: 314 VLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTF----YTYNTLI 369
Query: 74 K-VFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGC 132
+F + K+ + ++ ++R G+ L++V ++ LIN G ++A L +EM+ G
Sbjct: 370 HGLFMENKIEAAEILIR-EIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGI 428
Query: 133 EPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPN 192
+P + +++ + A F G M
Sbjct: 429 QPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGM------------------------- 463
Query: 193 GFSNSQILSFTERFPFTPTTSTYNTLLKA-CG-SDYYHAKALINEMKTVGLSPNQITWSI 250
P NTL+ C + A +L+ EM + ++P+ +T++
Sbjct: 464 ----------------KPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNC 507
Query: 251 LIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCE 310
L+ G E A E++ M GIKPD I+Y T I + + K A + +EM S
Sbjct: 508 LMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLG 567
Query: 311 IHPNWVTYNTLLKARSK 327
+P +TYN LLK SK
Sbjct: 568 FNPTLLTYNALLKGLSK 584
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 153/339 (45%), Gaps = 26/339 (7%)
Query: 17 IMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVF 76
IM+ G+KP + +YN L++ + GR++ A+ + E+K S G + D+ TY+ I+
Sbjct: 250 IMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMK---SKG-FQPDMQTYNPILSWM 305
Query: 77 ADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNT 136
+ A +V +M+ G+ ++V+++ LI C++ G +E A +EM+ G P
Sbjct: 306 CNEG---RASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTF 362
Query: 137 QCFNIILHACVEACQYDRAFRFFHSWKGNKML---GSFGEGYNSNLKQGSIHNATTVPNG 193
+N ++H + + A + ++ ++ N + G A + +
Sbjct: 363 YTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDE 422
Query: 194 FSNSQILSFTERFPFTPTTSTYNTLLKAC--GSDYYHAKALINEMKTVGLSPNQITWSIL 251
I PT TY +L+ + A L ++ G+ P+ + + L
Sbjct: 423 MMTDGI---------QPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTL 473
Query: 252 IDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIK-VCVESKNFKQALTLYEEMKSCE 310
+D N++ A +LK M I PD + Y ++ +C E K F++A L EMK
Sbjct: 474 MDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGK-FEEARELMGEMKRRG 532
Query: 311 IHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGY 349
I P+ ++YNTL+ SK G + + + +M G+
Sbjct: 533 IKPDHISYNTLISGYSKKG---DTKHAFMVRDEMLSLGF 568
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/337 (23%), Positives = 155/337 (45%), Gaps = 20/337 (5%)
Query: 15 YQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIK 74
Y M + +K ++ ++NI++ C G++ A+ L +E G +K + TY+T+++
Sbjct: 213 YADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGF---LGIMEVFG-IKPTIVTYNTLVQ 268
Query: 75 VFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEP 134
F+ + A + +M+S G + ++ +++ + G +A ++ EM G P
Sbjct: 269 GFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEG---RASEVLREMKEIGLVP 325
Query: 135 NTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGF 194
++ +NI++ C + AF + M+ +F Y N ++ + + N
Sbjct: 326 DSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTF---YTYN----TLIHGLFMENKI 378
Query: 195 SNSQILSFTERFP-FTPTTSTYNTLLKA-CG-SDYYHAKALINEMKTVGLSPNQITWSIL 251
++IL R + TYN L+ C D A AL +EM T G+ P Q T++ L
Sbjct: 379 EAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSL 438
Query: 252 IDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEI 311
I + A E+ + + G+KPD++ T + N +A +L +EM I
Sbjct: 439 IYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSI 498
Query: 312 HPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAG 348
+P+ VTYN L++ G E ++ + +M++ G
Sbjct: 499 NPDDVTYNCLMRGLCGEGKFEEARELMG---EMKRRG 532
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 67/139 (48%), Gaps = 4/139 (2%)
Query: 7 DLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDV 66
++ ++ + M + + PD +YN L++ C G+ + A+++ E+K +K D
Sbjct: 482 NMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKR----RGIKPDH 537
Query: 67 FTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEE 126
+Y+T+I ++ + A V+ +M S G N + +++L+ + E A +L E
Sbjct: 538 ISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLRE 597
Query: 127 MLLAGCEPNTQCFNIILHA 145
M G PN F ++ A
Sbjct: 598 MKSEGIVPNDSSFCSVIEA 616
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/340 (25%), Positives = 159/340 (46%), Gaps = 18/340 (5%)
Query: 10 YTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTY 69
+ + + M G +PD+ SY IL+ AG+V A +++ + + D
Sbjct: 132 FAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIR----SGVSPDNKAC 187
Query: 70 STIIKVFADAKLWQMALK-VKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEML 128
+ ++ A+ +A + V +++SA V L+TV +++LI+ AG +E+A L M
Sbjct: 188 AALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMS 247
Query: 129 LAGCEPNTQCFNIILHACVEACQYDRAFRFFHSW-KGNKMLGSFGEGYNSNLKQGSIHNA 187
GCEP+ +N++L+ + RA + L ++ YN LK+ H
Sbjct: 248 KIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYS--YNQLLKR---HCR 302
Query: 188 TTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKAC--GSDYYHAKALINEMKTVGLSPNQ 245
+ P+ N + R F S Y+TL++ S+ A L EM+ G+ N
Sbjct: 303 VSHPDKCYNFMVKEMEPR-GFCDVVS-YSTLIETFCRASNTRKAYRLFEEMRQKGMVMNV 360
Query: 246 ITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEE 305
+T++ LI N A ++L M + G+ PD I YTT + +S N +A ++ +
Sbjct: 361 VTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFND 420
Query: 306 MKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQ 345
M EI P+ ++YN+L+ + G V E + +++DM+
Sbjct: 421 MIEHEITPDAISYNSLISGLCRSGRVTEA---IKLFEDMK 457
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 142/318 (44%), Gaps = 13/318 (4%)
Query: 8 LTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVF 67
+T + I+ M G+ PD + L+ C A +VDLA +M E ++S R+KL
Sbjct: 165 VTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAE--EIKS-ARVKLSTV 221
Query: 68 TYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEM 127
Y+ +I F A + A +K M G + V ++ L+N ++++A + EM
Sbjct: 222 VYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEM 281
Query: 128 LLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGS-IHN 186
+ +G + + +N +L D+ + F + G+ + + I
Sbjct: 282 VRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPR-------GFCDVVSYSTLIET 334
Query: 187 ATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKAC--GSDYYHAKALINEMKTVGLSPN 244
N ++ + TY +L+KA + AK L+++M +GLSP+
Sbjct: 335 FCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPD 394
Query: 245 QITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYE 304
+I ++ ++D + NV+ A + M + I PD I+Y + I S +A+ L+E
Sbjct: 395 RIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFE 454
Query: 305 EMKSCEIHPNWVTYNTLL 322
+MK E P+ +T+ ++
Sbjct: 455 DMKGKECCPDELTFKFII 472
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 107/274 (39%), Gaps = 49/274 (17%)
Query: 18 MQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFA 77
M G++ D SYN LLK C D + +K +E G DV +YST+I+ F
Sbjct: 281 MVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFM--VKEMEPRGFC--DVVSYSTLIETFC 336
Query: 78 DAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQ 137
A + A ++ +MR G+ +N V ++SLI A G A +L ++M G P+
Sbjct: 337 RASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRI 396
Query: 138 CFNIIL-HACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSN 196
+ IL H C K G++ A V N
Sbjct: 397 FYTTILDHLC---------------------------------KSGNVDKAYGVFNDMIE 423
Query: 197 SQILSFTERFPFTPTTSTYNTLLKA-CGSDYY-HAKALINEMKTVGLSPNQITWSILIDI 254
+I TP +YN+L+ C S A L +MK P+++T+ +I
Sbjct: 424 HEI---------TPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGG 474
Query: 255 CGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIK 288
+ + A ++ M D G D T IK
Sbjct: 475 LIRGKKLSAAYKVWDQMMDKGFTLDRDVSDTLIK 508
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 69/145 (47%), Gaps = 4/145 (2%)
Query: 13 NIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTI 72
+++ M+ G+ ++ +Y L+KA G +A+ + ++ L L D Y+TI
Sbjct: 346 RLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELG----LSPDRIFYTTI 401
Query: 73 IKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGC 132
+ + A V +DM + + ++++SLI+ +G V +AI+LFE+M C
Sbjct: 402 LDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKEC 461
Query: 133 EPNTQCFNIILHACVEACQYDRAFR 157
P+ F I+ + + A++
Sbjct: 462 CPDELTFKFIIGGLIRGKKLSAAYK 486
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/342 (25%), Positives = 155/342 (45%), Gaps = 29/342 (8%)
Query: 16 QIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKV 75
+I +N + D+ YN++++ VD A+ ++ E++ K D TY +I
Sbjct: 134 KIQKNYCARNDI--YNMMIRLHARHNWVDQARGLFFEMQKWSC----KPDAETYDALINA 187
Query: 76 FADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPN 135
A W+ A+ + DM A + + +++LINAC +G +A+++ ++M G P+
Sbjct: 188 HGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPD 247
Query: 136 TQCFNIILHACVEACQYDRAFRFFHSWKGNKM---LGSFGEGYNSNLKQGSIHNATTVPN 192
NI+L A QY +A +F KG K+ +F K G A + N
Sbjct: 248 LVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFN 307
Query: 193 GFSNSQILSFTERFPFTPTTSTYNTL--LKACGSDYYHAKALINEMKTVGLSPNQITWSI 250
+R P T+ ++ L + + + +A+ M GL PN ++++
Sbjct: 308 SMRE-------KRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNA 360
Query: 251 LIDICGGTENVEG----AIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEM 306
L+ G V G A+ +L + GI PDV++YT + S+ +A ++ M
Sbjct: 361 LM----GAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMM 416
Query: 307 KSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAG 348
+ PN VTYN L+ A YGS + + + I++ M++ G
Sbjct: 417 RKERRKPNVVTYNALIDA---YGSNGFLAEAVEIFRQMEQDG 455
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/343 (23%), Positives = 148/343 (43%), Gaps = 21/343 (6%)
Query: 10 YTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTY 69
+ +N+ M + P ++YN L+ AC +G A ++ K++ VG D+ T+
Sbjct: 196 WAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTD-NGVGP---DLVTH 251
Query: 70 STIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEML- 128
+ ++ + + + AL M+ A V +T ++ +I + G QA+ LF M
Sbjct: 252 NIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMRE 311
Query: 129 -LAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNA 187
A C P+ F I+H + + F + EG N+ +
Sbjct: 312 KRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAM--------VAEGLKPNIVSYNALMG 363
Query: 188 TTVPNGFSNS--QILSFTERFPFTPTTSTYNTLLKACGSDYYHAKA--LINEMKTVGLSP 243
+G S + +L ++ P +Y LL + G KA + M+ P
Sbjct: 364 AYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKP 423
Query: 244 NQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLY 303
N +T++ LID G + A+EI + M GIKP+V++ T + C SK T+
Sbjct: 424 NVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVL 483
Query: 304 EEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQK 346
+S I+ N YN+ + + Y + E+++ +A+YQ M+K
Sbjct: 484 SAAQSRGINLNTAAYNSAIGS---YINAAELEKAIALYQSMRK 523
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 147/318 (46%), Gaps = 12/318 (3%)
Query: 14 IYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTII 73
+++ M GLKP++ SYN L+ A V G A + ++K + DV +Y+ ++
Sbjct: 342 VFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQ----NGIIPDVVSYTCLL 397
Query: 74 KVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCE 133
+ ++ A +V MR N V +++LI+A G + +A+++F +M G +
Sbjct: 398 NSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIK 457
Query: 134 PNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNG 193
PN +L AC + + + + ++ + YNS + GS NA +
Sbjct: 458 PNVVSVCTLLAACSRSKKKVNVDTVLSAAQ-SRGINLNTAAYNSAI--GSYINAAELEKA 514
Query: 194 FSNSQILSFTERFPFTPTTSTYNTLLK-ACG-SDYYHAKALINEMKTVGLSPNQITWSIL 251
+ Q + + + T+ L+ +C S Y A + + EM+ + + + +S +
Sbjct: 515 IALYQSM---RKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSV 571
Query: 252 IDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEI 311
+ V A I M AG +PDVIAYT+ + S+ + +A L+ EM++ I
Sbjct: 572 LCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGI 631
Query: 312 HPNWVTYNTLLKARSKYG 329
P+ + + L++A +K G
Sbjct: 632 EPDSIACSALMRAFNKGG 649
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/343 (19%), Positives = 147/343 (42%), Gaps = 45/343 (13%)
Query: 4 NSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLK 63
+ R + L+ +++M+ ++PD T++NI++ G+ A D++ ++ E +
Sbjct: 260 SGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMR--EKRAECR 317
Query: 64 LDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQL 123
DV T+++I+ +++ + V M + G+ N V++++L+ A A G+ A+ +
Sbjct: 318 PDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSV 377
Query: 124 FEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGS 183
++ G P+ + +L++ + Q +A F
Sbjct: 378 LGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVF------------------------ 413
Query: 184 IHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKA--LINEMKTVGL 241
++ ER P TYN L+ A GS+ + A+A + +M+ G+
Sbjct: 414 ---------------LMMRKER--RKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGI 456
Query: 242 SPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALT 301
PN ++ L+ C ++ +L + GI + AY +AI + + ++A+
Sbjct: 457 KPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIA 516
Query: 302 LYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDM 344
LY+ M+ ++ + VT+ L+ + E L +D+
Sbjct: 517 LYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDL 559
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 96/205 (46%), Gaps = 15/205 (7%)
Query: 144 HACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFT 203
C+E C F K K + + YN ++ + HN G +
Sbjct: 120 RGCIELC-----VNVFKWMKIQKNYCARNDIYNMMIRLHARHNWVDQARG-----LFFEM 169
Query: 204 ERFPFTPTTSTYNTLLKACG--SDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENV 261
+++ P TY+ L+ A G + A L+++M ++P++ T++ LI+ CG + N
Sbjct: 170 QKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNW 229
Query: 262 EGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTL 321
A+E+ K M D G+ PD++ + + + + +AL+ +E MK ++ P+ T+N +
Sbjct: 230 REALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNII 289
Query: 322 LKARSKYGSVLEVQQCLAIYQDMQK 346
+ SK G + Q L ++ M++
Sbjct: 290 IYCLSKLG---QSSQALDLFNSMRE 311
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/318 (19%), Positives = 137/318 (43%), Gaps = 36/318 (11%)
Query: 19 QNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFAD 78
Q+ G+ + +YN + + A ++ A +Y+ ++ ++K D T++ +I
Sbjct: 487 QSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRK----KKVKADSVTFTILISGSCR 542
Query: 79 AKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQC 138
+ A+ +M + L +SS++ A + G V +A +F +M +AGCEP+
Sbjct: 543 MSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIA 602
Query: 139 FNIILHACVEACQYDRAFRFFHSWKGNKM------LGSFGEGYNSNLKQGSIHNATTVPN 192
+ +LHA + ++ +A F + N + + +N K G N + +
Sbjct: 603 YTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFN---KGGQPSNVFVLMD 659
Query: 193 GFSNSQILSFTERFPFTPTTSTYNTLLKACGS--DYYHAKALINEMK------TVGLSPN 244
+I PF T + + + AC + ++ A LI M ++GL+ N
Sbjct: 660 LMREKEI-------PF--TGAVFFEIFSACNTLQEWKRAIDLIQMMDPYLPSLSIGLT-N 709
Query: 245 QITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYE 304
Q ++ + G + VE +++ + +G+ ++ Y ++ + N+++ + + E
Sbjct: 710 Q-----MLHLFGKSGKVEAMMKLFYKIIASGVGINLKTYAILLEHLLAVGNWRKYIEVLE 764
Query: 305 EMKSCEIHPNWVTYNTLL 322
M I P+ Y ++
Sbjct: 765 WMSGAGIQPSNQMYRDII 782
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/342 (25%), Positives = 155/342 (45%), Gaps = 29/342 (8%)
Query: 16 QIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKV 75
+I +N + D+ YN++++ VD A+ ++ E++ K D TY +I
Sbjct: 2 KIQKNYCARNDI--YNMMIRLHARHNWVDQARGLFFEMQKWSC----KPDAETYDALINA 55
Query: 76 FADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPN 135
A W+ A+ + DM A + + +++LINAC +G +A+++ ++M G P+
Sbjct: 56 HGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPD 115
Query: 136 TQCFNIILHACVEACQYDRAFRFFHSWKGNKM---LGSFGEGYNSNLKQGSIHNATTVPN 192
NI+L A QY +A +F KG K+ +F K G A + N
Sbjct: 116 LVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFN 175
Query: 193 GFSNSQILSFTERFPFTPTTSTYNTL--LKACGSDYYHAKALINEMKTVGLSPNQITWSI 250
+R P T+ ++ L + + + +A+ M GL PN ++++
Sbjct: 176 SMRE-------KRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNA 228
Query: 251 LIDICGGTENVEG----AIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEM 306
L+ G V G A+ +L + GI PDV++YT + S+ +A ++ M
Sbjct: 229 LM----GAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMM 284
Query: 307 KSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAG 348
+ PN VTYN L+ A YGS + + + I++ M++ G
Sbjct: 285 RKERRKPNVVTYNALIDA---YGSNGFLAEAVEIFRQMEQDG 323
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 147/343 (42%), Gaps = 21/343 (6%)
Query: 10 YTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTY 69
+ +N+ M + P ++YN L+ AC +G A ++ K++ VG D+ T+
Sbjct: 64 WAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTD-NGVGP---DLVTH 119
Query: 70 STIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEML- 128
+ ++ + + + AL M+ A V +T ++ +I + G QA+ LF M
Sbjct: 120 NIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMRE 179
Query: 129 -LAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNA 187
A C P+ F I+H + + F + EG N+ +
Sbjct: 180 KRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAM--------VAEGLKPNIVSYNALMG 231
Query: 188 TTVPNGFSNS--QILSFTERFPFTPTTSTYNTLLKACGSDYYHAKA--LINEMKTVGLSP 243
+G S + +L ++ P +Y LL + G KA + M+ P
Sbjct: 232 AYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKP 291
Query: 244 NQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLY 303
N +T++ LID G + A+EI + M GIKP+V++ T + C SK T+
Sbjct: 292 NVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVL 351
Query: 304 EEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQK 346
+S I+ N YN+ A Y + E+++ +A+YQ M+K
Sbjct: 352 SAAQSRGINLNTAAYNS---AIGSYINAAELEKAIALYQSMRK 391
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/319 (22%), Positives = 138/319 (43%), Gaps = 14/319 (4%)
Query: 14 IYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTII 73
+++ M GLKP++ SYN L+ A V G A + ++K + DV +Y+ ++
Sbjct: 210 VFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQ----NGIIPDVVSYTCLL 265
Query: 74 KVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCE 133
+ ++ A +V MR N V +++LI+A G + +A+++F +M G +
Sbjct: 266 NSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIK 325
Query: 134 PNTQCFNIILHACVEA---CQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTV 190
PN +L AC + D S N ++ S + + A +
Sbjct: 326 PNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIAL 385
Query: 191 PNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKALINEMKTVGLSPNQITWSI 250
++ + + F + S S Y A + + EM+ + + + +S
Sbjct: 386 YQSMRKKKVKADSVTFTILISGSCRM-------SKYPEAISYLKEMEDLSIPLTKEVYSS 438
Query: 251 LIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCE 310
++ V A I M AG +PDVIAYT+ + S+ + +A L+ EM++
Sbjct: 439 VLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANG 498
Query: 311 IHPNWVTYNTLLKARSKYG 329
I P+ + + L++A +K G
Sbjct: 499 IEPDSIACSALMRAFNKGG 517
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/343 (19%), Positives = 147/343 (42%), Gaps = 45/343 (13%)
Query: 4 NSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLK 63
+ R + L+ +++M+ ++PD T++NI++ G+ A D++ ++ E +
Sbjct: 128 SGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMR--EKRAECR 185
Query: 64 LDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQL 123
DV T+++I+ +++ + V M + G+ N V++++L+ A A G+ A+ +
Sbjct: 186 PDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSV 245
Query: 124 FEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGS 183
++ G P+ + +L++ + Q +A F
Sbjct: 246 LGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVF------------------------ 281
Query: 184 IHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKA--LINEMKTVGL 241
++ ER P TYN L+ A GS+ + A+A + +M+ G+
Sbjct: 282 ---------------LMMRKER--RKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGI 324
Query: 242 SPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALT 301
PN ++ L+ C ++ +L + GI + AY +AI + + ++A+
Sbjct: 325 KPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIA 384
Query: 302 LYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDM 344
LY+ M+ ++ + VT+ L+ + E L +D+
Sbjct: 385 LYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDL 427
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/318 (19%), Positives = 137/318 (43%), Gaps = 36/318 (11%)
Query: 19 QNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFAD 78
Q+ G+ + +YN + + A ++ A +Y+ ++ ++K D T++ +I
Sbjct: 355 QSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRK----KKVKADSVTFTILISGSCR 410
Query: 79 AKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQC 138
+ A+ +M + L +SS++ A + G V +A +F +M +AGCEP+
Sbjct: 411 MSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIA 470
Query: 139 FNIILHACVEACQYDRAFRFFHSWKGNKM------LGSFGEGYNSNLKQGSIHNATTVPN 192
+ +LHA + ++ +A F + N + + +N K G N + +
Sbjct: 471 YTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFN---KGGQPSNVFVLMD 527
Query: 193 GFSNSQILSFTERFPFTPTTSTYNTLLKACGS--DYYHAKALINEMK------TVGLSPN 244
+I PF T + + + AC + ++ A LI M ++GL+ N
Sbjct: 528 LMREKEI-------PF--TGAVFFEIFSACNTLQEWKRAIDLIQMMDPYLPSLSIGLT-N 577
Query: 245 QITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYE 304
Q ++ + G + VE +++ + +G+ ++ Y ++ + N+++ + + E
Sbjct: 578 Q-----MLHLFGKSGKVEAMMKLFYKIIASGVGINLKTYAILLEHLLAVGNWRKYIEVLE 632
Query: 305 EMKSCEIHPNWVTYNTLL 322
M I P+ Y ++
Sbjct: 633 WMSGAGIQPSNQMYRDII 650
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/340 (25%), Positives = 140/340 (41%), Gaps = 54/340 (15%)
Query: 15 YQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIK 74
Y + + G ++ +NIL+ C G + AQ ++ E+ L+ V +++T+I
Sbjct: 228 YMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRS----LQPTVVSFNTLIN 283
Query: 75 VFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEP 134
+ ++KH M + + +S+LINA ++ A LF+EM G P
Sbjct: 284 GYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIP 343
Query: 135 NTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGF 194
N F ++H HS G + E Y L +G
Sbjct: 344 NDVIFTTLIHG--------------HSRNGE--IDLMKESYQKMLSKG------------ 375
Query: 195 SNSQILSFTERFPFTPTTSTYNTLLKAC--GSDYYHAKALINEMKTVGLSPNQITWSILI 252
P YNTL+ D A+ +++ M GL P++IT++ LI
Sbjct: 376 -------------LQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLI 422
Query: 253 D-ICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAI-KVCVESKNFKQALTLYEEMKSCE 310
D C G + VE A+EI K M GI+ D + ++ + +C E + L EM
Sbjct: 423 DGFCRGGD-VETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERAL-REMLRAG 480
Query: 311 IHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYV 350
I P+ VTY ++ A K G + Q + ++MQ G+V
Sbjct: 481 IKPDDVTYTMMMDAFCKKG---DAQTGFKLLKEMQSDGHV 517
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/322 (24%), Positives = 129/322 (40%), Gaps = 51/322 (15%)
Query: 14 IYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTII 73
++ + L+P + S+N L+ C G +D LKH R + DVFTYS +I
Sbjct: 262 VFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGF----RLKHQMEKSRTRPDVFTYSALI 317
Query: 74 KVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCE 133
A + +M G+ N V +++LI+ + G ++ + +++ML G +
Sbjct: 318 NALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQ 377
Query: 134 PNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNG 193
P+ +N ++ N K G + A + +G
Sbjct: 378 PDIVLYNTLV--------------------------------NGFCKNGDLVAARNIVDG 405
Query: 194 FSNSQILSFTERFPFTPTTSTYNTLLKAC--GSDYYHAKALINEMKTVGLSPNQITWSIL 251
R P TY TL+ G D A + EM G+ +++ +S L
Sbjct: 406 MI---------RRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSAL 456
Query: 252 IDICGGTE--NVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSC 309
+CG + V A L+ M AGIKPD + YT + + + + L +EM+S
Sbjct: 457 --VCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSD 514
Query: 310 EIHPNWVTYNTLLKARSKYGSV 331
P+ VTYN LL K G +
Sbjct: 515 GHVPSVVTYNVLLNGLCKLGQM 536
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 96/211 (45%), Gaps = 18/211 (8%)
Query: 15 YQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGR-LKLDVFTYSTII 73
YQ M + GL+PD+ YN L+ C G + A+++ + + R L+ D TY+T+I
Sbjct: 368 YQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGM-----IRRGLRPDKITYTTLI 422
Query: 74 KVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCE 133
F + AL+++ +M G+ L+ V +S+L+ G V A + EML AG +
Sbjct: 423 DGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIK 482
Query: 134 PNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGS---FGEGYNSNLKQGSIHNATTV 190
P+ + +++ A + F+ + + + S + N K G + NA +
Sbjct: 483 PDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADML 542
Query: 191 PNGFSNSQILSFTERFPFTPTTSTYNTLLKA 221
+ N ++ P TYNTLL+
Sbjct: 543 LDAMLNIGVV---------PDDITYNTLLEG 564
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 66/149 (44%), Gaps = 4/149 (2%)
Query: 7 DLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDV 66
DL NI M GL+PD +Y L+ C G V+ A ++ KE+ ++LD
Sbjct: 395 DLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQ----NGIELDR 450
Query: 67 FTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEE 126
+S ++ A + +M AG+ + V ++ +++A G + +L +E
Sbjct: 451 VGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKE 510
Query: 127 MLLAGCEPNTQCFNIILHACVEACQYDRA 155
M G P+ +N++L+ + Q A
Sbjct: 511 MQSDGHVPSVVTYNVLLNGLCKLGQMKNA 539
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 84/344 (24%), Positives = 145/344 (42%), Gaps = 38/344 (11%)
Query: 18 MQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFA 77
M LG +PD+ ++ L+ C+ R++ A M ++ + +K DV Y+TII
Sbjct: 133 MMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMG----IKPDVVMYTTIIDSLC 188
Query: 78 DAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQ 137
AL + M + G+ + V ++SL+N ++G A L M +P+
Sbjct: 189 KNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVI 248
Query: 138 CFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQG---SIHNATTVPNGF 194
FN ++ A V+ ++ A E YN ++ +I T++ NGF
Sbjct: 249 TFNALIDAFVKEGKFLDA----------------EELYNEMIRMSIAPNIFTYTSLINGF 292
Query: 195 -------SNSQILSFTERFPFTPTTSTYNTLLKA-CG-SDYYHAKALINEMKTVGLSPNQ 245
Q+ E P Y +L+ C A + EM GL+ N
Sbjct: 293 CMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNT 352
Query: 246 ITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEE 305
IT++ LI G A E+ M G+ P++ Y + + K+AL ++E+
Sbjct: 353 ITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFED 412
Query: 306 MKSCE---IHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQK 346
M+ E + PN TYN LL G ++++ L +++DM+K
Sbjct: 413 MQKREMDGVAPNIWTYNVLLHGLCYNG---KLEKALMVFEDMRK 453
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 79/353 (22%), Positives = 154/353 (43%), Gaps = 32/353 (9%)
Query: 8 LTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVF 67
+ Y L+++ M+N G++PD+ Y L+ C +GR A + + + + ++K DV
Sbjct: 193 VNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGM----TKRKIKPDVI 248
Query: 68 TYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEM 127
T++ +I F + A ++ ++M + N ++SLIN G V++A Q+F M
Sbjct: 249 TFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLM 308
Query: 128 LLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNA 187
GC P+ + +++ + + D A + F+ + G+
Sbjct: 309 ETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGL-------------TGNTITY 355
Query: 188 TTVPNGFSN-------SQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKAL-----INE 235
TT+ GF ++ S P TYN LL + KAL + +
Sbjct: 356 TTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQK 415
Query: 236 MKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKN 295
+ G++PN T+++L+ +E A+ + + M + +I YT I+ ++
Sbjct: 416 REMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGK 475
Query: 296 FKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAG 348
K A+ L+ + S + PN VTY T++ + G E +++ M++ G
Sbjct: 476 VKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAH---VLFRKMKEDG 525
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/314 (22%), Positives = 133/314 (42%), Gaps = 26/314 (8%)
Query: 25 PDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQM 84
P + + LL + D+ ++ HL+ +G + D++T + ++ F + +
Sbjct: 70 PSIIDFTKLLNVIAKMKKFDVVINL---CDHLQIMG-VSHDLYTCNLLMNCFCQSSQPYL 125
Query: 85 ALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILH 144
A M G + V ++SLIN +E+A+ + +M+ G +P+ + I+
Sbjct: 126 ASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIID 185
Query: 145 ACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNS------- 197
+ + + A F E Y + + T++ NG NS
Sbjct: 186 SLCKNGHVNYALSLFDQM----------ENYGI---RPDVVMYTSLVNGLCNSGRWRDAD 232
Query: 198 QILSFTERFPFTPTTSTYNTLLKACGSD--YYHAKALINEMKTVGLSPNQITWSILIDIC 255
+L + P T+N L+ A + + A+ L NEM + ++PN T++ LI+
Sbjct: 233 SLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGF 292
Query: 256 GGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNW 315
V+ A ++ M G PDV+AYT+ I + K A+ ++ EM + N
Sbjct: 293 CMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNT 352
Query: 316 VTYNTLLKARSKYG 329
+TY TL++ + G
Sbjct: 353 ITYTTLIQGFGQVG 366
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 110/243 (45%), Gaps = 11/243 (4%)
Query: 104 WSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWK 163
+ ++ H+ +A+ LF M+ + P+ F +L+ + ++D +
Sbjct: 40 YREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQ 99
Query: 164 GNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKA-- 221
++G + Y NL ++ + S L + F P T+ +L+
Sbjct: 100 ---IMGVSHDLYTCNLLMNCFCQSS---QPYLASSFLGKMMKLGFEPDIVTFTSLINGFC 153
Query: 222 CGSDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVI 281
G+ A +++N+M +G+ P+ + ++ +ID +V A+ + M + GI+PDV+
Sbjct: 154 LGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVV 213
Query: 282 AYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIY 341
YT+ + S ++ A +L M +I P+ +T+N L+ A K G L+ ++ +Y
Sbjct: 214 MYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEE---LY 270
Query: 342 QDM 344
+M
Sbjct: 271 NEM 273
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 130/307 (42%), Gaps = 48/307 (15%)
Query: 18 MQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFA 77
M G D+ S+N +L C + RV+ A ++++ L+ GR +D TY+ I+ +
Sbjct: 152 MHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALR-----GRFSVDTVTYNVILNGWC 206
Query: 78 DAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQ 137
K AL+V +M G+N N +++++ AG + A + F EM CE +
Sbjct: 207 LIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVV 266
Query: 138 CFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNS 197
+ ++H A + RA F + +++G +
Sbjct: 267 TYTTVVHGFGVAGEIKRARNVF----------------DEMIREGVL------------- 297
Query: 198 QILSFTERFPFTPTTSTYNTLLKA-CGSD-YYHAKALINEMKTVGLSPNQITWSILIDIC 255
P+ +TYN +++ C D +A + EM G PN T+++LI
Sbjct: 298 ------------PSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGL 345
Query: 256 GGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNW 315
E+++ M + G +P+ Y I+ E ++AL L+E+M S + PN
Sbjct: 346 FHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNL 405
Query: 316 VTYNTLL 322
TYN L+
Sbjct: 406 DTYNILI 412
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 68/327 (20%), Positives = 140/327 (42%), Gaps = 47/327 (14%)
Query: 18 MQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFA 77
M++L + P ++ I+ + AG+ D A ++ + H + D+ +++TI+ V
Sbjct: 117 MRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNM-HEHGCFQ---DLASFNTILDVLC 172
Query: 78 DAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQ 137
+K + A ++ +R +++TV ++ ++N +A+++ +EM+ G PN
Sbjct: 173 KSKRVEKAYELFRALRGR-FSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLT 231
Query: 138 CFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNS 197
+N +L A Q A+ FF K + + TTV +GF
Sbjct: 232 TYNTMLKGFFRAGQIRHAWEFFLEMKKRDC-------------EIDVVTYTTVVHGF--- 275
Query: 198 QILSFTERFPFTPTTSTYNTLLKACGSDYYHAKALINEMKTVGLSPNQITWSILIDICGG 257
+ A+ + +EM G+ P+ T++ +I +
Sbjct: 276 -----------------------GVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCK 312
Query: 258 TENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVT 317
+NVE A+ + + M G +P+V Y I+ + F + L + M++ PN+ T
Sbjct: 313 KDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQT 372
Query: 318 YNTLLKARSKYGSVLEVQQCLAIYQDM 344
YN +++ Y EV++ L +++ M
Sbjct: 373 YNMMIRY---YSECSEVEKALGLFEKM 396
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 118/286 (41%), Gaps = 12/286 (4%)
Query: 65 DVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLF 124
D ++ I + A L + H MRS + + ++ + A AG ++A++LF
Sbjct: 90 DASSFDLAIDIAARLHLHPTVWSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLF 149
Query: 125 EEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSI 184
M GC + FN IL ++ + ++A+ F + +G + + YN L +
Sbjct: 150 LNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGRFSVDTVT--YNVILNGWCL 207
Query: 185 HNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKAC--GSDYYHAKALINEMKTVGLS 242
T P ++L P +TYNT+LK HA EMK
Sbjct: 208 IKRT--PKAL---EVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCE 262
Query: 243 PNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTL 302
+ +T++ ++ G ++ A + M G+ P V Y I+V + N + A+ +
Sbjct: 263 IDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVM 322
Query: 303 YEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAG 348
+EEM PN TYN L++ G E + + Q M+ G
Sbjct: 323 FEEMVRRGYEPNVTTYNVLIRGLFHAG---EFSRGEELMQRMENEG 365
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 75/144 (52%), Gaps = 4/144 (2%)
Query: 12 LNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYST 71
L + + M G+ P++T+YN +LK AG++ A + + E+K + ++DV TY+T
Sbjct: 215 LEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDC----EIDVVTYTT 270
Query: 72 IIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAG 131
++ F A + A V +M GV + ++++I VE A+ +FEEM+ G
Sbjct: 271 VVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRG 330
Query: 132 CEPNTQCFNIILHACVEACQYDRA 155
EPN +N+++ A ++ R
Sbjct: 331 YEPNVTTYNVLIRGLFHAGEFSRG 354
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 83/347 (23%), Positives = 158/347 (45%), Gaps = 29/347 (8%)
Query: 12 LNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYST 71
+ + + M+ +K D Y+I++ C G +D A +++ E++ + K D+ Y+T
Sbjct: 232 MELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEME----IKGFKADIIIYTT 287
Query: 72 IIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAG 131
+I+ F A W K+ DM + + VA+S+LI+ G + +A +L +EM+ G
Sbjct: 288 LIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRG 347
Query: 132 CEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLG-SFGEGYNSNLKQGSIH----- 185
P+T + ++ + Q D+A N ML +G N++ +I
Sbjct: 348 ISPDTVTYTSLIDGFCKENQLDKA---------NHMLDLMVSKGCGPNIRTFNILINGYC 398
Query: 186 NATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKA-CGSDYYH-AKALINEMKTVGLSP 243
A + +G + +S T TYNTL++ C AK L EM + + P
Sbjct: 399 KANLIDDGLELFRKMSLR---GVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRP 455
Query: 244 NQITWSILID-ICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTL 302
+ +++ IL+D +C E E A+EI + + + ++ D+ Y I + A L
Sbjct: 456 DIVSYKILLDGLCDNGEP-EKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDL 514
Query: 303 YEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGY 349
+ + + P+ TYN ++ K GS+ E +++ M++ G+
Sbjct: 515 FCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEAD---LLFRKMEEDGH 558
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/345 (21%), Positives = 151/345 (43%), Gaps = 21/345 (6%)
Query: 8 LTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVF 67
++ L + M +G KP + + N L+ C+ G+V D + + G + +
Sbjct: 158 VSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKV---SDAVLLIDRMVETG-FQPNEV 213
Query: 68 TYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEM 127
TY ++KV + +A+++ M + L+ V +S +I+ G ++ A LF EM
Sbjct: 214 TYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEM 273
Query: 128 LLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKM---LGSFGEGYNSNLKQGSI 184
+ G + + + ++ A ++D + K+ + +F + +K+G +
Sbjct: 274 EIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKL 333
Query: 185 HNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKA--LINEMKTVGLS 242
A + I +P T TY +L+ + KA +++ M + G
Sbjct: 334 REAEELHKEMIQRGI---------SPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCG 384
Query: 243 PNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTL 302
PN T++ILI+ ++ +E+ + M G+ D + Y T I+ E + A L
Sbjct: 385 PNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKEL 444
Query: 303 YEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKA 347
++EM S + P+ V+Y LL G E ++ L I++ ++K+
Sbjct: 445 FQEMVSRRVRPDIVSYKILLDGLCDNG---EPEKALEIFEKIEKS 486
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 77/345 (22%), Positives = 143/345 (41%), Gaps = 21/345 (6%)
Query: 11 TLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYS 70
L++ + M+ G+ ++ + +I++ CC ++ LA + + + +G + D T+S
Sbjct: 91 VLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLA---FSAMGKIIKLG-YEPDTVTFS 146
Query: 71 TIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLA 130
T+I AL++ M G + ++L+N G V A+ L + M+
Sbjct: 147 TLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVET 206
Query: 131 GCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKM---LGSFGEGYNSNLKQGSIHNA 187
G +PN + +L ++ Q A + K+ + + K GS+ NA
Sbjct: 207 GFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNA 266
Query: 188 TTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKA-CGSDYYHAKA-LINEMKTVGLSPNQ 245
N F+ +I F Y TL++ C + + A L+ +M ++P+
Sbjct: 267 F---NLFNEMEIKG------FKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDV 317
Query: 246 ITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEE 305
+ +S LID + A E+ K M GI PD + YT+ I + +A + +
Sbjct: 318 VAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDL 377
Query: 306 MKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYV 350
M S PN T+N L+ Y + L +++ M G V
Sbjct: 378 MVSKGCGPNIRTFNILING---YCKANLIDDGLELFRKMSLRGVV 419
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 117/269 (43%), Gaps = 14/269 (5%)
Query: 14 IYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTII 73
+++ M G+ PD +Y L+ C ++D A M L + S G ++ T++ +I
Sbjct: 339 LHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHM---LDLMVSKG-CGPNIRTFNILI 394
Query: 74 KVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCE 133
+ A L L++ M GV +TV +++LI G +E A +LF+EM+
Sbjct: 395 NGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVR 454
Query: 134 PNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNG 193
P+ + I+L + + ++A F + +KM G N+ + NA+ V +
Sbjct: 455 PDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIG---IYNIIIHGMCNASKVDDA 511
Query: 194 FSNSQILSFTERFPFTPTTSTYNTLLKAC---GSDYYHAKALINEMKTVGLSPNQITWSI 250
+ L P TYN ++ GS A L +M+ G SPN T++I
Sbjct: 512 WDLFCSLPLK---GVKPDVKTYNIMIGGLCKKGS-LSEADLLFRKMEEDGHSPNGCTYNI 567
Query: 251 LIDICGGTENVEGAIEILKSMGDAGIKPD 279
LI G + + ++++ + G D
Sbjct: 568 LIRAHLGEGDATKSAKLIEEIKRCGFSVD 596
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/300 (20%), Positives = 112/300 (37%), Gaps = 49/300 (16%)
Query: 28 TSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALK 87
SY L++ V + D A D+++E+ RL +S + V A K + + L
Sbjct: 38 VSYRERLRSGIVDIKEDDAVDLFQEMTRSRPRPRL----IDFSRLFSVVARTKQYDLVLD 93
Query: 88 VKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHA-C 146
+ M G+ N S +IN C + A +++ G EP+T F+ +++ C
Sbjct: 94 LCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLC 153
Query: 147 VEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERF 206
+E G + A +++
Sbjct: 154 LE---------------------------------GRVSEAL---------ELVDRMVEM 171
Query: 207 PFTPTTSTYNTLLKAC--GSDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGA 264
PT T N L+ A LI+ M G PN++T+ ++ + + A
Sbjct: 172 GHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALA 231
Query: 265 IEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKA 324
+E+L+ M + IK D + Y+ I + + A L+ EM+ + + Y TL++
Sbjct: 232 MELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRG 291
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/234 (20%), Positives = 97/234 (41%), Gaps = 11/234 (4%)
Query: 118 EQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNS 177
+ A+ LF+EM + P F+ + QYD K ++ G Y
Sbjct: 54 DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDL---CKQMELKGIAHNLYTL 110
Query: 178 NLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKA--LINE 235
++ + FS + + + P T T++TL+ + ++A L++
Sbjct: 111 SIMINCCCRCRKLSLAFSA---MGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDR 167
Query: 236 MKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKN 295
M +G P IT + L++ V A+ ++ M + G +P+ + Y +KV +S
Sbjct: 168 MVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQ 227
Query: 296 FKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGY 349
A+ L +M+ +I + V Y+ ++ K GS + ++ +M+ G+
Sbjct: 228 TALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGS---LDNAFNLFNEMEIKGF 278
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 139/318 (43%), Gaps = 47/318 (14%)
Query: 22 GLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKL 81
G +P+ +YN L+ + A ++ A +++ +++ K D TY T+I + A A
Sbjct: 394 GCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQE----AGCKPDRVTYCTLIDIHAKAGF 449
Query: 82 WQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNI 141
+A+ + M++ G++ +T +S +IN AG + A +LF EM+ GC PN +NI
Sbjct: 450 LDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNI 509
Query: 142 ILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILS 201
++ +A Y A + + + NA
Sbjct: 510 MMDLHAKARNYQNALKLYRD----------------------MQNAG------------- 534
Query: 202 FTERFPFTPTTSTYNTLLKACGSDYY--HAKALINEMKTVGLSPNQITWSILIDICGGTE 259
F P TY+ +++ G Y A+A+ EM+ P++ + +L+D+ G
Sbjct: 535 ------FEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAG 588
Query: 260 NVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYN 319
NVE A + ++M AG++P+V + + + +A L + M + + P+ TY
Sbjct: 589 NVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYT 648
Query: 320 TLLKARSKYGSVLEVQQC 337
LL + S L++ C
Sbjct: 649 LLLSCCTDGRSKLDMGFC 666
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 87/353 (24%), Positives = 148/353 (41%), Gaps = 58/353 (16%)
Query: 2 NVNS--RDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESV 59
NV+S R + + +QNLGL+ D N +LK G A + LK
Sbjct: 304 NVSSVLRRFRWGPAAEEALQNLGLRIDAYQANQVLKQMNDYGN---ALGFFYWLKRQPG- 359
Query: 60 GRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQ 119
K D TY+T++ AK + K+ +M G NTV ++ LI++ A + +
Sbjct: 360 --FKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNE 417
Query: 120 AIQLFEEMLLAGCEPN--TQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNS 177
A+ +F +M AGC+P+ T C I +HA +A D A + + +
Sbjct: 418 AMNVFNQMQEAGCKPDRVTYCTLIDIHA--KAGFLDIAMDMYQRMQAGGL---------- 465
Query: 178 NLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYY--HAKALINE 235
+P T TY+ ++ G + A L E
Sbjct: 466 -------------------------------SPDTFTYSVIINCLGKAGHLPAAHKLFCE 494
Query: 236 MKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKN 295
M G +PN +T++I++D+ N + A+++ + M +AG +PD + Y+ ++V
Sbjct: 495 MVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGY 554
Query: 296 FKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAG 348
++A ++ EM+ P+ Y L+ K G+V + Q YQ M AG
Sbjct: 555 LEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQW---YQAMLHAG 604
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/304 (21%), Positives = 134/304 (44%), Gaps = 63/304 (20%)
Query: 56 LESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDM-RSAGVNLNTVAWSSLINACAHA 114
L+++G L++D + + ++K D + AL + + R G + +++++ A
Sbjct: 322 LQNLG-LRIDAYQANQVLKQMND---YGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRA 377
Query: 115 GLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEG 174
+L +EM+ GC+PNT +N ++H+ Y RA N+ + F +
Sbjct: 378 KQFGAINKLLDEMVRDGCQPNTVTYNRLIHS------YGRANYL------NEAMNVFNQM 425
Query: 175 YNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKA--- 231
+ K P TY TL+ HAKA
Sbjct: 426 QEAGCK-----------------------------PDRVTYCTLID------IHAKAGFL 450
Query: 232 -----LINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTA 286
+ M+ GLSP+ T+S++I+ G ++ A ++ M D G P+++ Y
Sbjct: 451 DIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIM 510
Query: 287 IKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQK 346
+ + +++N++ AL LY +M++ P+ VTY+ +++ G + E + A++ +MQ+
Sbjct: 511 MDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAE---AVFTEMQQ 567
Query: 347 AGYV 350
++
Sbjct: 568 KNWI 571
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 119/292 (40%), Gaps = 51/292 (17%)
Query: 8 LTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVF 67
L +N++ MQ G KPD +Y L+ AG +D+A DMY+ ++ G L D F
Sbjct: 415 LNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQ----AGGLSPDTF 470
Query: 68 TYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEM 127
TYS II A A K+ +M G N V ++ +++ A A + A++L+ +M
Sbjct: 471 TYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDM 530
Query: 128 LLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNA 187
AG EP+ ++I++ ++LG G + A
Sbjct: 531 QNAGFEPDKVTYSIVM----------------------EVLGHC----------GYLEEA 558
Query: 188 TTVPNGFSNSQILSFTE--RFPFTPTTSTYNTLLKACGSDYYHAKA--LINEMKTVGLSP 243
V FTE + + P Y L+ G KA M GL P
Sbjct: 559 EAV-----------FTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRP 607
Query: 244 NQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKN 295
N T + L+ + A E+L++M G++P + YT + C + ++
Sbjct: 608 NVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDGRS 659
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 72/149 (48%), Gaps = 4/149 (2%)
Query: 1 MNVNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVG 60
++ +R+ L +Y+ MQN G +PD +Y+I+++ G ++ A+ ++ E++ +
Sbjct: 513 LHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIP 572
Query: 61 RLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQA 120
D Y ++ ++ A + A + M AG+ N +SL++ + +A
Sbjct: 573 ----DEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEA 628
Query: 121 IQLFEEMLLAGCEPNTQCFNIILHACVEA 149
+L + ML G P+ Q + ++L C +
Sbjct: 629 YELLQNMLALGLRPSLQTYTLLLSCCTDG 657
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 139/318 (43%), Gaps = 47/318 (14%)
Query: 22 GLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKL 81
G +P+ +YN L+ + A ++ A +++ +++ K D TY T+I + A A
Sbjct: 394 GCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQE----AGCKPDRVTYCTLIDIHAKAGF 449
Query: 82 WQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNI 141
+A+ + M++ G++ +T +S +IN AG + A +LF EM+ GC PN +NI
Sbjct: 450 LDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNI 509
Query: 142 ILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILS 201
++ +A Y A + + + NA
Sbjct: 510 MMDLHAKARNYQNALKLYRD----------------------MQNAG------------- 534
Query: 202 FTERFPFTPTTSTYNTLLKACGSDYY--HAKALINEMKTVGLSPNQITWSILIDICGGTE 259
F P TY+ +++ G Y A+A+ EM+ P++ + +L+D+ G
Sbjct: 535 ------FEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAG 588
Query: 260 NVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYN 319
NVE A + ++M AG++P+V + + + +A L + M + + P+ TY
Sbjct: 589 NVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYT 648
Query: 320 TLLKARSKYGSVLEVQQC 337
LL + S L++ C
Sbjct: 649 LLLSCCTDGRSKLDMGFC 666
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 87/353 (24%), Positives = 148/353 (41%), Gaps = 58/353 (16%)
Query: 2 NVNS--RDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESV 59
NV+S R + + +QNLGL+ D N +LK G A + LK
Sbjct: 304 NVSSVLRRFRWGPAAEEALQNLGLRIDAYQANQVLKQMNDYGN---ALGFFYWLKRQPG- 359
Query: 60 GRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQ 119
K D TY+T++ AK + K+ +M G NTV ++ LI++ A + +
Sbjct: 360 --FKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNE 417
Query: 120 AIQLFEEMLLAGCEPN--TQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNS 177
A+ +F +M AGC+P+ T C I +HA +A D A + + +
Sbjct: 418 AMNVFNQMQEAGCKPDRVTYCTLIDIHA--KAGFLDIAMDMYQRMQAGGL---------- 465
Query: 178 NLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYY--HAKALINE 235
+P T TY+ ++ G + A L E
Sbjct: 466 -------------------------------SPDTFTYSVIINCLGKAGHLPAAHKLFCE 494
Query: 236 MKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKN 295
M G +PN +T++I++D+ N + A+++ + M +AG +PD + Y+ ++V
Sbjct: 495 MVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGY 554
Query: 296 FKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAG 348
++A ++ EM+ P+ Y L+ K G+V + Q YQ M AG
Sbjct: 555 LEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQW---YQAMLHAG 604
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/304 (21%), Positives = 134/304 (44%), Gaps = 63/304 (20%)
Query: 56 LESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDM-RSAGVNLNTVAWSSLINACAHA 114
L+++G L++D + + ++K D + AL + + R G + +++++ A
Sbjct: 322 LQNLG-LRIDAYQANQVLKQMND---YGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRA 377
Query: 115 GLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEG 174
+L +EM+ GC+PNT +N ++H+ Y RA N+ + F +
Sbjct: 378 KQFGAINKLLDEMVRDGCQPNTVTYNRLIHS------YGRANYL------NEAMNVFNQM 425
Query: 175 YNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKA--- 231
+ K P TY TL+ HAKA
Sbjct: 426 QEAGCK-----------------------------PDRVTYCTLID------IHAKAGFL 450
Query: 232 -----LINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTA 286
+ M+ GLSP+ T+S++I+ G ++ A ++ M D G P+++ Y
Sbjct: 451 DIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIM 510
Query: 287 IKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQK 346
+ + +++N++ AL LY +M++ P+ VTY+ +++ G + E + A++ +MQ+
Sbjct: 511 MDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAE---AVFTEMQQ 567
Query: 347 AGYV 350
++
Sbjct: 568 KNWI 571
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 119/292 (40%), Gaps = 51/292 (17%)
Query: 8 LTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVF 67
L +N++ MQ G KPD +Y L+ AG +D+A DMY+ ++ G L D F
Sbjct: 415 LNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQ----AGGLSPDTF 470
Query: 68 TYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEM 127
TYS II A A K+ +M G N V ++ +++ A A + A++L+ +M
Sbjct: 471 TYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDM 530
Query: 128 LLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNA 187
AG EP+ ++I++ ++LG G + A
Sbjct: 531 QNAGFEPDKVTYSIVM----------------------EVLGHC----------GYLEEA 558
Query: 188 TTVPNGFSNSQILSFTE--RFPFTPTTSTYNTLLKACGSDYYHAKA--LINEMKTVGLSP 243
V FTE + + P Y L+ G KA M GL P
Sbjct: 559 EAV-----------FTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRP 607
Query: 244 NQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKN 295
N T + L+ + A E+L++M G++P + YT + C + ++
Sbjct: 608 NVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDGRS 659
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 72/149 (48%), Gaps = 4/149 (2%)
Query: 1 MNVNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVG 60
++ +R+ L +Y+ MQN G +PD +Y+I+++ G ++ A+ ++ E++ +
Sbjct: 513 LHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIP 572
Query: 61 RLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQA 120
D Y ++ ++ A + A + M AG+ N +SL++ + +A
Sbjct: 573 ----DEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEA 628
Query: 121 IQLFEEMLLAGCEPNTQCFNIILHACVEA 149
+L + ML G P+ Q + ++L C +
Sbjct: 629 YELLQNMLALGLRPSLQTYTLLLSCCTDG 657
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 139/318 (43%), Gaps = 47/318 (14%)
Query: 22 GLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKL 81
G +P+ +YN L+ + A ++ A +++ +++ K D TY T+I + A A
Sbjct: 394 GCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQE----AGCKPDRVTYCTLIDIHAKAGF 449
Query: 82 WQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNI 141
+A+ + M++ G++ +T +S +IN AG + A +LF EM+ GC PN +NI
Sbjct: 450 LDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNI 509
Query: 142 ILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILS 201
++ +A Y A + + + NA
Sbjct: 510 MMDLHAKARNYQNALKLYRD----------------------MQNAG------------- 534
Query: 202 FTERFPFTPTTSTYNTLLKACGSDYY--HAKALINEMKTVGLSPNQITWSILIDICGGTE 259
F P TY+ +++ G Y A+A+ EM+ P++ + +L+D+ G
Sbjct: 535 ------FEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAG 588
Query: 260 NVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYN 319
NVE A + ++M AG++P+V + + + +A L + M + + P+ TY
Sbjct: 589 NVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYT 648
Query: 320 TLLKARSKYGSVLEVQQC 337
LL + S L++ C
Sbjct: 649 LLLSCCTDGRSKLDMGFC 666
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 87/353 (24%), Positives = 148/353 (41%), Gaps = 58/353 (16%)
Query: 2 NVNS--RDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESV 59
NV+S R + + +QNLGL+ D N +LK G A + LK
Sbjct: 304 NVSSVLRRFRWGPAAEEALQNLGLRIDAYQANQVLKQMNDYGN---ALGFFYWLKRQPG- 359
Query: 60 GRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQ 119
K D TY+T++ AK + K+ +M G NTV ++ LI++ A + +
Sbjct: 360 --FKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNE 417
Query: 120 AIQLFEEMLLAGCEPN--TQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNS 177
A+ +F +M AGC+P+ T C I +HA +A D A + + +
Sbjct: 418 AMNVFNQMQEAGCKPDRVTYCTLIDIHA--KAGFLDIAMDMYQRMQAGGL---------- 465
Query: 178 NLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYY--HAKALINE 235
+P T TY+ ++ G + A L E
Sbjct: 466 -------------------------------SPDTFTYSVIINCLGKAGHLPAAHKLFCE 494
Query: 236 MKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKN 295
M G +PN +T++I++D+ N + A+++ + M +AG +PD + Y+ ++V
Sbjct: 495 MVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGY 554
Query: 296 FKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAG 348
++A ++ EM+ P+ Y L+ K G+V + Q YQ M AG
Sbjct: 555 LEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQW---YQAMLHAG 604
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/304 (21%), Positives = 134/304 (44%), Gaps = 63/304 (20%)
Query: 56 LESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDM-RSAGVNLNTVAWSSLINACAHA 114
L+++G L++D + + ++K D + AL + + R G + +++++ A
Sbjct: 322 LQNLG-LRIDAYQANQVLKQMND---YGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRA 377
Query: 115 GLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEG 174
+L +EM+ GC+PNT +N ++H+ Y RA N+ + F +
Sbjct: 378 KQFGAINKLLDEMVRDGCQPNTVTYNRLIHS------YGRANYL------NEAMNVFNQM 425
Query: 175 YNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKA--- 231
+ K P TY TL+ HAKA
Sbjct: 426 QEAGCK-----------------------------PDRVTYCTLID------IHAKAGFL 450
Query: 232 -----LINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTA 286
+ M+ GLSP+ T+S++I+ G ++ A ++ M D G P+++ Y
Sbjct: 451 DIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIM 510
Query: 287 IKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQK 346
+ + +++N++ AL LY +M++ P+ VTY+ +++ G + E + A++ +MQ+
Sbjct: 511 MDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAE---AVFTEMQQ 567
Query: 347 AGYV 350
++
Sbjct: 568 KNWI 571
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 119/292 (40%), Gaps = 51/292 (17%)
Query: 8 LTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVF 67
L +N++ MQ G KPD +Y L+ AG +D+A DMY+ ++ G L D F
Sbjct: 415 LNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQ----AGGLSPDTF 470
Query: 68 TYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEM 127
TYS II A A K+ +M G N V ++ +++ A A + A++L+ +M
Sbjct: 471 TYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDM 530
Query: 128 LLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNA 187
AG EP+ ++I++ ++LG G + A
Sbjct: 531 QNAGFEPDKVTYSIVM----------------------EVLGHC----------GYLEEA 558
Query: 188 TTVPNGFSNSQILSFTE--RFPFTPTTSTYNTLLKACGSDYYHAKA--LINEMKTVGLSP 243
V FTE + + P Y L+ G KA M GL P
Sbjct: 559 EAV-----------FTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRP 607
Query: 244 NQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKN 295
N T + L+ + A E+L++M G++P + YT + C + ++
Sbjct: 608 NVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDGRS 659
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 72/149 (48%), Gaps = 4/149 (2%)
Query: 1 MNVNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVG 60
++ +R+ L +Y+ MQN G +PD +Y+I+++ G ++ A+ ++ E++ +
Sbjct: 513 LHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIP 572
Query: 61 RLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQA 120
D Y ++ ++ A + A + M AG+ N +SL++ + +A
Sbjct: 573 ----DEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEA 628
Query: 121 IQLFEEMLLAGCEPNTQCFNIILHACVEA 149
+L + ML G P+ Q + ++L C +
Sbjct: 629 YELLQNMLALGLRPSLQTYTLLLSCCTDG 657
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 78/338 (23%), Positives = 140/338 (41%), Gaps = 47/338 (13%)
Query: 3 VNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRL 62
V R + + +M G ++ ++NILLK C A + +E++ L
Sbjct: 118 VQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRR----NSL 173
Query: 63 KLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQ 122
DVF+Y+T+I+ F + K + AL++ ++M+ +G + + V W LI+A AG +++A+
Sbjct: 174 MPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMG 233
Query: 123 LFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQG 182
+EM G E + + ++ + + DR F + L++G
Sbjct: 234 FLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALF----------------DEVLERG 277
Query: 183 SIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKA-CG-SDYYHAKALINEMKTVG 240
+P TYNTL++ C A + M G
Sbjct: 278 D-------------------------SPCAITYNTLIRGFCKLGQLKEASEIFEFMIERG 312
Query: 241 LSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQAL 300
+ PN T++ LID G + A+++L M + +P+ + Y I + A+
Sbjct: 313 VRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAV 372
Query: 301 TLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCL 338
+ E MK P+ +TYN LL G + E + L
Sbjct: 373 EIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLL 410
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 80/367 (21%), Positives = 145/367 (39%), Gaps = 46/367 (12%)
Query: 18 MQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKE-LKHLESVGRLKLDVFTYSTIIKVF 76
M+ +GL+ D+ Y L++ C G +D + ++ E L+ +S TY+T+I+ F
Sbjct: 238 MKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPC-----AITYNTLIRGF 292
Query: 77 ADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNT 136
+ A ++ M GV N ++ LI+ G ++A+QL M+ EPN
Sbjct: 293 CKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNA 352
Query: 137 QCFNIILHACVEACQYDRAFRFFHSWKG----------NKMLGSFGEGYNSNLKQGSI-- 184
+NII++ + A K N +LG G +L + S
Sbjct: 353 VTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLG--GLCAKGDLDEASKLL 410
Query: 185 -----HNATTVPNGFS-NSQILSFTERFPFTPTTSTYNTLLKACGS-------------- 224
++ T P+ S N+ I + Y+ L++ G+
Sbjct: 411 YLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTL 470
Query: 225 ---DYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVI 281
D A L ++ + N T++ +ID T + A +L M + ++P V
Sbjct: 471 KAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVF 530
Query: 282 AYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIY 341
Y + + + QA L+EEM+ P+ V++N ++ K G + + L
Sbjct: 531 DYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLV-- 588
Query: 342 QDMQKAG 348
M +AG
Sbjct: 589 -GMSRAG 594
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/348 (18%), Positives = 147/348 (42%), Gaps = 33/348 (9%)
Query: 14 IYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTII 73
I++ M G++P++ +Y L+ C G+ A + + + + + TY+ II
Sbjct: 304 IFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDE----EPNAVTYNIII 359
Query: 74 KVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGC- 132
L A+++ M+ + + ++ L+ G +++A +L ML
Sbjct: 360 NKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSY 419
Query: 133 -EPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEG--------YNSNLKQGS 183
+P+ +N ++H + + +A + + ++ G G NS LK G
Sbjct: 420 TDPDVISYNALIHGLCKENRLHQALDIY-----DLLVEKLGAGDRVTTNILLNSTLKAGD 474
Query: 184 IHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKA-CGSDYYH-AKALINEMKTVGL 241
++ A + S+S+I+ + TY ++ C + + AK L+ +M+ L
Sbjct: 475 VNKAMELWKQISDSKIVR---------NSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSEL 525
Query: 242 SPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALT 301
P+ ++ L+ +++ A + + M PDV+++ I +++ + K A +
Sbjct: 526 QPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAES 585
Query: 302 LYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGY 349
L M + P+ TY+ L+ K G + + ++ + M +G+
Sbjct: 586 LLVGMSRAGLSPDLFTYSKLINRFLKLGY---LDEAISFFDKMVDSGF 630
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/286 (21%), Positives = 122/286 (42%), Gaps = 18/286 (6%)
Query: 12 LNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYST 71
+ I ++M+ +PD +YNILL C G +D A + + L+ DV +Y+
Sbjct: 372 VEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLM--LKDSSYTDPDVISYNA 429
Query: 72 IIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAG 131
+I AL + + + V + L+N+ AG V +A++L++++ +
Sbjct: 430 LIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSK 489
Query: 132 CEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNL----KQGSIHNA 187
N+ + ++ + + A + +++ S + YN L K+GS+ A
Sbjct: 490 IVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFD-YNCLLSSLCKEGSLDQA 548
Query: 188 TTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKAC--GSDYYHAKALINEMKTVGLSPNQ 245
++ +R P ++N ++ D A++L+ M GLSP+
Sbjct: 549 W---------RLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDL 599
Query: 246 ITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCV 291
T+S LI+ ++ AI M D+G +PD + +K C+
Sbjct: 600 FTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCI 645
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 67/132 (50%), Gaps = 4/132 (3%)
Query: 23 LKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLW 82
L+P + YN LL + C G +D A +++E++ + DV +++ +I A
Sbjct: 525 LQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFP----DVVSFNIMIDGSLKAGDI 580
Query: 83 QMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNII 142
+ A + M AG++ + +S LIN G +++AI F++M+ +G EP+ + +
Sbjct: 581 KSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSV 640
Query: 143 LHACVEACQYDR 154
L C+ + D+
Sbjct: 641 LKYCISQGETDK 652
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 124/274 (45%), Gaps = 23/274 (8%)
Query: 8 LTYTLNIYQIM-QNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDV 66
L L+IY ++ + LG D + NILL + AG V+ A +++K++ S ++ +
Sbjct: 440 LHQALDIYDLLVEKLG-AGDRVTTNILLNSTLKAGDVNKAMELWKQI----SDSKIVRNS 494
Query: 67 FTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEE 126
TY+ +I F + +A + MR + + + ++ L+++ G ++QA +LFEE
Sbjct: 495 DTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEE 554
Query: 127 MLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKM---LGSFGEGYNSNLKQGS 183
M P+ FNI++ ++A A + L ++ + N LK G
Sbjct: 555 MQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGY 614
Query: 184 IHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAK--ALINEM--KTV 239
+ A + + +S F P +++LK C S K L+ ++ K +
Sbjct: 615 LDEAISFFDKMVDS---------GFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDI 665
Query: 240 GLSPNQITWSILIDICGGTENVEGAIEILKSMGD 273
L ++T +++ +C + N++ A +L+ D
Sbjct: 666 VLDK-ELTCTVMDYMCNSSANMDLAKRLLRVTDD 698
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 84/329 (25%), Positives = 141/329 (42%), Gaps = 56/329 (17%)
Query: 22 GLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKL 81
G KPD+ +YN L+ C + A+ +Y L + + G L+ D +TY+T+I + +
Sbjct: 281 GPKPDVITYNNLIYGLCKNSKFQEAE-VY--LGKMVNEG-LEPDSYTYNTLIAGYCKGGM 336
Query: 82 WQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNI 141
Q+A ++ D G + + SLI+ H G +A+ LF E L G +PN +N
Sbjct: 337 VQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNT 396
Query: 142 ILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILS 201
++ SN QG I A + N S ++
Sbjct: 397 LIKGL------------------------------SN--QGMILEAAQLANEMSEKGLI- 423
Query: 202 FTERFPFTPTTSTYNTLLKA-----CGSDYYHAKALINEMKTVGLSPNQITWSILIDICG 256
P T+N L+ C SD A L+ M + G P+ T++ILI
Sbjct: 424 --------PEVQTFNILVNGLCKMGCVSD---ADGLVKVMISKGYFPDIFTFNILIHGYS 472
Query: 257 GTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWV 316
+E A+EIL M D G+ PDV Y + + ++ F+ + Y+ M PN
Sbjct: 473 TQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLF 532
Query: 317 TYNTLLKARSKYGSVLEVQQCLAIYQDMQ 345
T+N LL++ +Y ++ + L + ++M+
Sbjct: 533 TFNILLESLCRY---RKLDEALGLLEEMK 558
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 80/332 (24%), Positives = 141/332 (42%), Gaps = 50/332 (15%)
Query: 18 MQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFA 77
M N GL+PD +YN L+ C G V LA+ + + V D FTY ++I
Sbjct: 312 MVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVP----DQFTYRSLIDGLC 367
Query: 78 DAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQ 137
AL + ++ G+ N + +++LI ++ G++ +A QL EM G P Q
Sbjct: 368 HEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQ 427
Query: 138 CFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNS 197
FNI++ N K G + +A +G
Sbjct: 428 TFNILV--------------------------------NGLCKMGCVSDA----DGLVKV 451
Query: 198 QILS--FTERFPFTPTTSTYNTLLKACGSDYYHAKALINEMKTVGLSPNQITWSILIDIC 255
I F + F F Y+T LK +A +++ M G+ P+ T++ L++
Sbjct: 452 MISKGYFPDIFTFNILIHGYSTQLKM-----ENALEILDVMLDNGVDPDVYTYNSLLNGL 506
Query: 256 GGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNW 315
T E +E K+M + G P++ + ++ + +AL L EEMK+ ++P+
Sbjct: 507 CKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDA 566
Query: 316 VTYNTLLKARSKYGSVLEVQQCLAIYQDMQKA 347
VT+ TL+ K G ++ +++ M++A
Sbjct: 567 VTFGTLIDGFCKNG---DLDGAYTLFRKMEEA 595
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/338 (23%), Positives = 141/338 (41%), Gaps = 34/338 (10%)
Query: 12 LNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYST 71
+N+++ M +P + SYN ++ +G D A +Y ++ + DV++++
Sbjct: 96 VNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDR----GITPDVYSFTI 151
Query: 72 IIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAG 131
+K F AL++ ++M S G +N VA+ +++ + +LF +ML +G
Sbjct: 152 RMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASG 211
Query: 132 CEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNL------KQGSIH 185
FN +L + + +L + + NL ++G +
Sbjct: 212 VSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNL---FTYNLFIQGLCQRGELD 268
Query: 186 NATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKAC--GSDYYHAKALINEMKTVGLSP 243
A + + E+ P P TYN L+ S + A+ + +M GL P
Sbjct: 269 GAVRM--------VGCLIEQGP-KPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEP 319
Query: 244 NQITWSILI-DICGGTENVEGAIEILKSM-GDA---GIKPDVIAYTTAIKVCVESKNFKQ 298
+ T++ LI C G G +++ + + GDA G PD Y + I +
Sbjct: 320 DSYTYNTLIAGYCKG-----GMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNR 374
Query: 299 ALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQ 336
AL L+ E I PN + YNTL+K S G +LE Q
Sbjct: 375 ALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQ 412
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 125/288 (43%), Gaps = 18/288 (6%)
Query: 18 MQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFA 77
M GL P++ ++NIL+ C G V A + +K + S G D+FT++ +I ++
Sbjct: 417 MSEKGLIPEVQTFNILVNGLCKMGCVSDADGL---VKVMISKGYFP-DIFTFNILIHGYS 472
Query: 78 DAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQ 137
+ AL++ M GV+ + ++SL+N E ++ ++ M+ GC PN
Sbjct: 473 TQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLF 532
Query: 138 CFNIILHACVEACQYDRAFRFFHSWKG---NKMLGSFGEGYNSNLKQGSIHNATTVPNGF 194
FNI+L + + D A K N +FG + K G + A T+
Sbjct: 533 TFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTL---- 588
Query: 195 SNSQILSFTERFPFTPTTSTYNTLLKACGS--DYYHAKALINEMKTVGLSPNQITWSILI 252
E + + +T TYN ++ A + A+ L EM L P+ T+ +++
Sbjct: 589 ----FRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMV 644
Query: 253 DICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIK-VCVESKNFKQA 299
D T NV + L M + G P + I +CVE + ++ A
Sbjct: 645 DGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAA 692
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 104/245 (42%), Gaps = 13/245 (5%)
Query: 12 LNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYST 71
L I +M + G+ PD+ +YN LL C + + + YK + L FT++
Sbjct: 481 LEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNL----FTFNI 536
Query: 72 IIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLA- 130
+++ + AL + +M++ VN + V + +LI+ G ++ A LF +M A
Sbjct: 537 LLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAY 596
Query: 131 GCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTV 190
+T +NII+HA E A + F ++ LG +GY L V
Sbjct: 597 KVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMV-DRCLGP--DGYTYRLMVDGFCKTGNV 653
Query: 191 PNGFSNSQILSFTERFPFTPTTSTYNTLLKA-CGSD-YYHAKALINEMKTVGLSPNQITW 248
G+ +L E F P+ +T ++ C D Y A +I+ M GL P +
Sbjct: 654 NLGY--KFLLEMMEN-GFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAVNT 710
Query: 249 SILID 253
+D
Sbjct: 711 ICDVD 715
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 72/321 (22%), Positives = 138/321 (42%), Gaps = 26/321 (8%)
Query: 18 MQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFA 77
M G +PD+ +Y ++ C G DLA ++ +++ +++ +V YST+I
Sbjct: 209 MVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKME----AAKIEANVVIYSTVIDSLC 264
Query: 78 DAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQ 137
+ AL + +M + GV N + +SSLI+ + G A +L +M+ PN
Sbjct: 265 KYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLV 324
Query: 138 CFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGF--- 194
F+ ++ A V+ + +A + + + +I +++ NGF
Sbjct: 325 TFSALIDAFVKKGKLVKAEKLYEEMIKRSI-------------DPNIFTYSSLINGFCML 371
Query: 195 ----SNSQILSFTERFPFTPTTSTYNTLLKA-CGSDYY-HAKALINEMKTVGLSPNQITW 248
Q+L R P TYNTL+ C + L EM GL N +T+
Sbjct: 372 DRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTY 431
Query: 249 SILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKS 308
+ LI + + A + K M G+ P+++ Y + ++ +A+ ++E ++
Sbjct: 432 TTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQR 491
Query: 309 CEIHPNWVTYNTLLKARSKYG 329
+ P+ TYN +++ K G
Sbjct: 492 STMEPDIYTYNIMIEGMCKAG 512
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 78/340 (22%), Positives = 141/340 (41%), Gaps = 20/340 (5%)
Query: 7 DLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDV 66
+L + ++ +M P + ++ LL A + DL ++++ L + ++
Sbjct: 58 ELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILG----ISHNL 113
Query: 67 FTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEE 126
+TY+ +I F +AL + M G + V +SL+N H + A+ L ++
Sbjct: 114 YTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQ 173
Query: 127 MLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSW--KG-NKMLGSFGEGYNSNLKQGS 183
M+ G +P+T F ++H + A +G L ++G N K+G
Sbjct: 174 MVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGD 233
Query: 184 IHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYH---AKALINEMKTVG 240
A + N ++I Y+T++ + Y H A L EM+ G
Sbjct: 234 TDLALNLLNKMEAAKI---------EANVVIYSTVIDSL-CKYRHEDDALNLFTEMENKG 283
Query: 241 LSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQAL 300
+ PN IT+S LI A +L M + I P+++ ++ I V+ +A
Sbjct: 284 VRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAE 343
Query: 301 TLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAI 340
LYEEM I PN TY++L+ + E +Q L +
Sbjct: 344 KLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLEL 383
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 137/294 (46%), Gaps = 32/294 (10%)
Query: 7 DLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDV 66
D LN+ M+ ++ ++ Y+ ++ + C D A +++ E+ E+ G ++ +V
Sbjct: 233 DTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEM---ENKG-VRPNV 288
Query: 67 FTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEE 126
TYS++I + W A ++ DM +N N V +S+LI+A G + +A +L+EE
Sbjct: 289 ITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEE 348
Query: 127 MLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHN 186
M+ +PN ++ +++ C DR LG + +++ + N
Sbjct: 349 MIKRSIDPNIFTYSSLING---FCMLDR-------------LGEAKQMLELMIRKDCLPN 392
Query: 187 ATT---VPNGFSNSQILS-----FTE--RFPFTPTTSTYNTLLKAC--GSDYYHAKALIN 234
T + NGF ++ + F E + T TY TL+ D +A+ +
Sbjct: 393 VVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFK 452
Query: 235 EMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIK 288
+M +VG+ PN +T++IL+D + A+ + + + + ++PD+ Y I+
Sbjct: 453 QMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIE 506
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 69/135 (51%), Gaps = 4/135 (2%)
Query: 25 PDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQM 84
P++ +YN L+ C A RVD ++++E+ VG + TY+T+I F A+
Sbjct: 391 PNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVG----NTVTYTTLIHGFFQARDCDN 446
Query: 85 ALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILH 144
A V M S GV+ N + ++ L++ G + +A+ +FE + + EP+ +NI++
Sbjct: 447 AQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIE 506
Query: 145 ACVEACQYDRAFRFF 159
+A ++ +F
Sbjct: 507 GMCKAGKWKMGGIYF 521
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 145/325 (44%), Gaps = 26/325 (8%)
Query: 13 NIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTI 72
+ ++ + G P++ ++ L+ C G +D A D++K + E G ++ D+ YST+
Sbjct: 272 RLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVM---EQRG-IEPDLIAYSTL 327
Query: 73 IKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGC 132
I + A + M K+ GV L+ V +SS I+ +G + A +++ ML G
Sbjct: 328 IDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGI 387
Query: 133 EPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPN 192
PN + I++ CQ R + F G +G+ + + SI +++ +
Sbjct: 388 SPNVVTYTILIKGL---CQDGRIYEAF---------GMYGQILKRGM-EPSIVTYSSLID 434
Query: 193 GF-------SNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKALINEMKTVGLSP-- 243
GF S + + + P Y L+ A+ +K +G S
Sbjct: 435 GFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRL 494
Query: 244 NQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLY 303
N + ++ LID + A+++ + MG GIKPDV +TT ++V + ++AL L+
Sbjct: 495 NVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLF 554
Query: 304 EEMKSCEIHPNWVTYNTLLKARSKY 328
M + P+ + Y TL+ A K+
Sbjct: 555 FRMFKMGLEPDALAYCTLIDAFCKH 579
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 88/395 (22%), Positives = 158/395 (40%), Gaps = 66/395 (16%)
Query: 3 VNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKEL--KHLE--- 57
V S DL +Y+ M G+ P++ +Y IL+K C GR+ A MY ++ + +E
Sbjct: 367 VKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSI 426
Query: 58 -----------SVGRLK---------------LDVFTYSTIIKVFADAKLWQMALKVKHD 91
G L+ DV Y ++ + L A++
Sbjct: 427 VTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVK 486
Query: 92 MRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQ 151
M + LN V ++SLI+ ++A+++F M + G +P+ F ++ + +
Sbjct: 487 MLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGR 546
Query: 152 YDRA-FRFFHSWKGN-----------------KMLGSFGEGYNSNLKQGSIHNATTVPNG 193
+ A F FF +K M + G +++ I V N
Sbjct: 547 LEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNV 606
Query: 194 -----FSNSQILSFTERF------PFTPTTSTYNTLLKACG----SDYYHAKALINEMKT 238
F +I ++ F P TYNT++ CG A+ + +K
Sbjct: 607 VIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMI--CGYCSLRRLDEAERIFELLKV 664
Query: 239 VGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQ 298
PN +T +ILI + +++GAI + M + G KP+ + Y + +S + +
Sbjct: 665 TPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEG 724
Query: 299 ALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLE 333
+ L+EEM+ I P+ V+Y+ ++ K G V E
Sbjct: 725 SFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDE 759
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 75/366 (20%), Positives = 152/366 (41%), Gaps = 38/366 (10%)
Query: 14 IYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTII 73
+Y+ M +G PD+ Y +L+ G + M +K L ++L+V ++++I
Sbjct: 448 LYEDMIKMGYPPDVVIYGVLVDGLSKQGL--MLHAMRFSVKMLGQ--SIRLNVVVFNSLI 503
Query: 74 KVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCE 133
+ + ALKV M G+ + +++++ G +E+A+ LF M G E
Sbjct: 504 DGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLE 563
Query: 134 PNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFG------------------EGY 175
P+ + ++ A + + + F + NK+ +
Sbjct: 564 PDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKF 623
Query: 176 NSNLKQGSIHNATTVPN----GFSNSQILSFTERF-------PFTPTTSTYNTLLKAC-- 222
+NL +G + N G+ + + L ER PF P T T L+
Sbjct: 624 FNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCK 683
Query: 223 GSDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIA 282
+D A + + M G PN +T+ L+D + ++EG+ ++ + M + GI P +++
Sbjct: 684 NNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVS 743
Query: 283 YTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQ 342
Y+ I + +A ++ + ++ P+ V Y L++ K G ++E +Y+
Sbjct: 744 YSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAA---LLYE 800
Query: 343 DMQKAG 348
M + G
Sbjct: 801 HMLRNG 806
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/320 (21%), Positives = 134/320 (41%), Gaps = 16/320 (5%)
Query: 11 TLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYS 70
L ++++M G+KPD+ ++ +++ + GR++ A ++ + + L+ D Y
Sbjct: 515 ALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMG----LEPDALAYC 570
Query: 71 TIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLA 130
T+I F + L++ M+ ++ + + +I+ +E A + F ++
Sbjct: 571 TLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEG 630
Query: 131 GCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTV 190
EP+ +N ++ + D A R F K G N+ IH
Sbjct: 631 KMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPF------GPNTVTLTILIHVLCKN 684
Query: 191 PNGFSNSQILSFTERFPFTPTTSTYNTLLK--ACGSDYYHAKALINEMKTVGLSPNQITW 248
+ ++ S P TY L+ + D + L EM+ G+SP+ +++
Sbjct: 685 NDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSY 744
Query: 249 SILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKS 308
SI+ID V+ A I DA + PDV+AY I+ + +A LYE M
Sbjct: 745 SIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLR 804
Query: 309 CEIHPNWVTYNTLLKARSKY 328
+ P+ + L +A S+Y
Sbjct: 805 NGVKPD----DLLQRALSEY 820
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 92/223 (41%), Gaps = 10/223 (4%)
Query: 117 VEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKM---LGSFGE 173
+E A +L +L G PN F +++ + + DRAF F + + L ++
Sbjct: 267 IEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYST 326
Query: 174 GYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKALI 233
+ K G + + SQ L + +ST + +K+ D A +
Sbjct: 327 LIDGYFKAGMLGMGHKL-----FSQALHKGVKLDVVVFSSTIDVYVKS--GDLATASVVY 379
Query: 234 NEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVES 293
M G+SPN +T++ILI + A + + G++P ++ Y++ I +
Sbjct: 380 KRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKC 439
Query: 294 KNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQ 336
N + LYE+M P+ V Y L+ SK G +L +
Sbjct: 440 GNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMR 482
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 77/174 (44%), Gaps = 20/174 (11%)
Query: 189 TVPNGFSNS-------QILSFTERFPFTPTTSTYNTLLKACGSDYYHA------KALINE 235
T+ NGF + E+ P Y+TL+ Y+ A L ++
Sbjct: 291 TLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDG----YFKAGMLGMGHKLFSQ 346
Query: 236 MKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKN 295
G+ + + +S ID+ + ++ A + K M GI P+V+ YT IK +
Sbjct: 347 ALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGR 406
Query: 296 FKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGY 349
+A +Y ++ + P+ VTY++L+ K G+ ++ A+Y+DM K GY
Sbjct: 407 IYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGN---LRSGFALYEDMIKMGY 457
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/332 (21%), Positives = 147/332 (44%), Gaps = 50/332 (15%)
Query: 18 MQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFA 77
M G +P++ +Y +++ C G +DLA ++ +++ +++ +V YST+I
Sbjct: 216 MVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKME----AAKIEANVVIYSTVIDSLC 271
Query: 78 DAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQ 137
+ AL + +M + GV N + +SSLI+ + A +L +M+ PN
Sbjct: 272 KYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVV 331
Query: 138 CFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNS 197
FN ++ A V K+G + A + +
Sbjct: 332 TFNALIDAFV--------------------------------KEGKLVEAEKLYDEMIKR 359
Query: 198 QILSFTERFPFTPTTSTYNTLLKA-CGSDYY-HAKALINEMKTVGLSPNQITWSILIDIC 255
I P TY++L+ C D AK + M + PN +T++ LI+
Sbjct: 360 SI---------DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGF 410
Query: 256 GGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNW 315
+ ++ +E+ + M G+ + + YTT I ++++ A ++++M S +HPN
Sbjct: 411 CKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNI 470
Query: 316 VTYNTLLKARSKYGSVLEVQQCLAIYQDMQKA 347
+TYNTLL K G ++++ + +++ +Q++
Sbjct: 471 MTYNTLLDGLCKNG---KLEKAMVVFEYLQRS 499
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 76/347 (21%), Positives = 153/347 (44%), Gaps = 19/347 (5%)
Query: 7 DLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDV 66
DL +L + MQ LG+ ++ +YNIL+ C ++ LA + ++ L + +
Sbjct: 102 DLVISLG--EKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLG----YEPSI 155
Query: 67 FTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEE 126
T S+++ + K A+ + M G +T+ +++LI+ +A+ L +
Sbjct: 156 VTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDR 215
Query: 127 MLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHN 186
M+ GC+PN + ++++ + D AF + + K+ N + I +
Sbjct: 216 MVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEA------NVVIYSTVIDS 269
Query: 187 ATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYH---AKALINEMKTVGLSP 243
+ + + E P TY++L+ +C +Y A L+++M ++P
Sbjct: 270 LCKYRHEDDALNLFTEMENKGVRPNVITYSSLI-SCLCNYERWSDASRLLSDMIERKINP 328
Query: 244 NQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLY 303
N +T++ LID + A ++ M I PD+ Y++ I +A ++
Sbjct: 329 NVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF 388
Query: 304 EEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYV 350
E M S + PN VTYNTL+ K + + + ++++M + G V
Sbjct: 389 ELMISKDCFPNVVTYNTLINGFCK---AKRIDEGVELFREMSQRGLV 432
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 129/306 (42%), Gaps = 20/306 (6%)
Query: 25 PDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQM 84
P + +N LL A + DL + ++++ L + +++TY+ +I F +
Sbjct: 83 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLG----ISHNLYTYNILINCFCRRSQISL 138
Query: 85 ALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILH 144
AL + M G + V SSL+N H + A+ L ++M+ G P+T F ++H
Sbjct: 139 ALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIH 198
Query: 145 ACVEACQYDRAFRFFHSW--KG-NKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILS 201
+ A +G L ++G N K+G I A + N ++I
Sbjct: 199 GLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKI-- 256
Query: 202 FTERFPFTPTTSTYNTLLKACGSDYYH---AKALINEMKTVGLSPNQITWSILIDICGGT 258
Y+T++ + Y H A L EM+ G+ PN IT+S LI
Sbjct: 257 -------EANVVIYSTVIDSL-CKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNY 308
Query: 259 ENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTY 318
E A +L M + I P+V+ + I V+ +A LY+EM I P+ TY
Sbjct: 309 ERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTY 368
Query: 319 NTLLKA 324
++L+
Sbjct: 369 SSLING 374
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/344 (19%), Positives = 155/344 (45%), Gaps = 15/344 (4%)
Query: 7 DLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDV 66
D+ N+ M+ ++ ++ Y+ ++ + C D A +++ E+ E+ G ++ +V
Sbjct: 240 DIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEM---ENKG-VRPNV 295
Query: 67 FTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEE 126
TYS++I + + W A ++ DM +N N V +++LI+A G + +A +L++E
Sbjct: 296 ITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDE 355
Query: 127 MLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHN 186
M+ +P+ ++ +++ C +DR H ++ F N
Sbjct: 356 MIKRSIDPDIFTYSSLING---FCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCK 412
Query: 187 ATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKAC--GSDYYHAKALINEMKTVGLSPN 244
A + G ++ + T TY TL+ D +A+ + +M + G+ PN
Sbjct: 413 AKRIDEGV---ELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPN 469
Query: 245 QITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYE 304
+T++ L+D +E A+ + + + + ++P + Y I+ ++ + L+
Sbjct: 470 IMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFC 529
Query: 305 EMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAG 348
+ + P+ + YNT++ + G E A+++ M++ G
Sbjct: 530 SLSLKGVKPDVIIYNTMISGFCRKGLKEEAD---ALFRKMREDG 570
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 12/236 (5%)
Query: 14 IYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTII 73
+Y M + PD+ +Y+ L+ C+ R+D A+ M++ + + +V TY+T+I
Sbjct: 352 LYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFP----NVVTYNTLI 407
Query: 74 KVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCE 133
F AK +++ +M G+ NTV +++LI+ A + A +F++M+ G
Sbjct: 408 NGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVH 467
Query: 134 PNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNG 193
PN +N +L + + ++A F + +KM + Y N+ + A V +G
Sbjct: 468 PNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTI---YTYNIMIEGMCKAGKVEDG 524
Query: 194 FSNSQILSFTERFPFTPTTSTYNTLLKA-CGSDYY-HAKALINEMKTVGLSPNQIT 247
+ LS P YNT++ C A AL +M+ G P+ T
Sbjct: 525 WDLFCSLSLK---GVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 150/319 (47%), Gaps = 26/319 (8%)
Query: 24 KPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQ 83
KPD+ +YNIL+ C G+ ++A E S L + +Y+ +I+ + +K +
Sbjct: 342 KPDVATYNILINRLCKEGKKEVAVGFLDE----ASKKGLIPNNLSYAPLIQAYCKSKEYD 397
Query: 84 MALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIIL 143
+A K+ M G + V + LI+ +G ++ A+ + +++ G P+ +N+++
Sbjct: 398 IASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLM 457
Query: 144 HACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNS------ 197
+ ++ A K+L F E + N+ + AT + +GF S
Sbjct: 458 SGLCKTGRFLPA----------KLL--FSEMLDRNILPDAYVYATLI-DGFIRSGDFDEA 504
Query: 198 -QILSFTERFPFTPTTSTYNTLLKA-CGSDYY-HAKALINEMKTVGLSPNQITWSILIDI 254
++ S + +N ++K C S A A +N M L P++ T+S +ID
Sbjct: 505 RKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDG 564
Query: 255 CGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPN 314
+++ AI+I + M KP+V+ YT+ I +FK A ++EM+ ++ PN
Sbjct: 565 YVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPN 624
Query: 315 WVTYNTLLKARSKYGSVLE 333
VTY TL+++ +K S LE
Sbjct: 625 VVTYTTLIRSLAKESSTLE 643
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 76/351 (21%), Positives = 139/351 (39%), Gaps = 38/351 (10%)
Query: 18 MQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHL-ESVGRLKLDVFTYSTIIKVF 76
++N +K + + +L A +G + A ++Y + L +SV DV ++++ +
Sbjct: 125 LRNENVKLTHEALSHVLHAYAESGSLSKAVEIYDYVVELYDSVP----DVIACNSLLSLL 180
Query: 77 ADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNT 136
++ A KV +M G +++ + L+ + G VE +L E GC PN
Sbjct: 181 VKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNI 240
Query: 137 QCFNIILHACVEACQYDRAFRFFHSWKGNKM---LGSFGEGYNSNLKQGSI--------- 184
+N I+ + + A+ F K L +FG N K+G
Sbjct: 241 VFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSE 300
Query: 185 --HNATTVPNGFSNSQILSFTERFPF----------------TPTTSTYNTLL-KACGSD 225
V F N+ I+ R + P +TYN L+ + C
Sbjct: 301 VKERGLRVSVWFLNN-IIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEG 359
Query: 226 YYH-AKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYT 284
A ++E GL PN ++++ LI ++ + A ++L M + G KPD++ Y
Sbjct: 360 KKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYG 419
Query: 285 TAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQ 335
I V S + A+ + ++ + P+ YN L+ K G L +
Sbjct: 420 ILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAK 470
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/321 (19%), Positives = 133/321 (41%), Gaps = 16/321 (4%)
Query: 22 GLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKL 81
G P++ YN ++ C G ++ A ++KELK + L+ T+ T+I F
Sbjct: 235 GCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLE----TFGTMINGFCKEGD 290
Query: 82 WQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNI 141
+ + ++ +++ G+ ++ +++I+A G + ++ C+P+ +NI
Sbjct: 291 FVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNI 350
Query: 142 ILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGF--SNSQI 199
+++ + + + A F ++ + NL + A + ++ +
Sbjct: 351 LINRLCKEGKKEVAVGFLDEASKKGLIPN-------NLSYAPLIQAYCKSKEYDIASKLL 403
Query: 200 LSFTERFPFTPTTSTYNTLLKACGSDYYHAKALINEMKTV--GLSPNQITWSILIDICGG 257
L ER P TY L+ + A+ ++K + G+SP+ +++L+
Sbjct: 404 LQMAER-GCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCK 462
Query: 258 TENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVT 317
T A + M D I PD Y T I + S +F +A ++ + + V
Sbjct: 463 TGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVH 522
Query: 318 YNTLLKARSKYGSVLEVQQCL 338
+N ++K + G + E C+
Sbjct: 523 HNAMIKGFCRSGMLDEALACM 543
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 129/287 (44%), Gaps = 15/287 (5%)
Query: 66 VFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFE 125
V +Y ++K+FA+ ++ ++ +M G ++ LI +C AGL +QA+ F
Sbjct: 149 VNSYHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLLICSCGEAGLAKQAVVQFM 208
Query: 126 EMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIH 185
+ P +N IL++ + QY W +ML +G++ ++ +I
Sbjct: 209 KSKTFNYRPFKHSYNAILNSLLGVKQYK-----LIEWVYKQMLE---DGFSPDVLTYNIL 260
Query: 186 NATTVPNGFSNSQILSFTE--RFPFTPTTSTYNTLLKACGSDYYHAKAL--INEMKTVGL 241
T G + F E R F+P + TYN LL G AL +N MK VG+
Sbjct: 261 LWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGI 320
Query: 242 SPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALT 301
P+ + ++ LID N+E L M AG +PDV+ YT I V S +A
Sbjct: 321 DPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKE 380
Query: 302 LYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAG 348
++ EM PN TYN++++ G E ++ + ++M+ G
Sbjct: 381 MFREMTVKGQLPNVFTYNSMIRGLCMAG---EFREACWLLKEMESRG 424
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/276 (20%), Positives = 114/276 (41%), Gaps = 51/276 (18%)
Query: 14 IYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTII 73
+Y+ M G PD+ +YNILL G++D ++ E+ D +TY+ ++
Sbjct: 241 VYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMAR----DGFSPDSYTYNILL 296
Query: 74 KVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCE 133
+ AL + M+ G++ + + +++LI+ + AG +E +EM+ AGC
Sbjct: 297 HILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCR 356
Query: 134 PNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNG 193
P+ C+ +++ V + + D+A F L PN
Sbjct: 357 PDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQL----------------------PNV 394
Query: 194 FSNSQILSFTERFPFTPTTSTYNTLLKAC--GSDYYHAKALINEMKTVGLSPNQITWSIL 251
F TYN++++ ++ A L+ EM++ G +PN + +S L
Sbjct: 395 F-------------------TYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTL 435
Query: 252 IDICGGTENVEGAIEILKSMGDAG----IKPDVIAY 283
+ + A ++++ M G + P ++ Y
Sbjct: 436 VSYLRKAGKLSEARKVIREMVKKGHYVHLVPKMMKY 471
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/364 (24%), Positives = 158/364 (43%), Gaps = 59/364 (16%)
Query: 18 MQNLGLKPDMTSYNILLKACCVAGRVD----LAQDMYKELKHLESVGRLKLDVFTYSTII 73
M++ G+ D+ +YN+L+ C + R+ L +DM K + H V TY+T+I
Sbjct: 294 MKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEV--------TYNTLI 345
Query: 74 KVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCE 133
F++ +A ++ ++M S G++ N V +++LI+ G ++A+++F M G
Sbjct: 346 NGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLT 405
Query: 134 PNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNG 193
P+ + ++L + ++D A F+ K N + G + + G NG
Sbjct: 406 PSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGV--CVGRITYTGMIDG------LCKNG 457
Query: 194 FSNSQILSFTE--RFPFTPTTSTYNTLLKA-CGSDYYH-AKALINEMKTVGLSPNQITWS 249
F + ++ E + P TY+ L+ C + AK ++ + VGLSPN I +S
Sbjct: 458 FLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYS 517
Query: 250 ILIDIC-------------------GGTEN----------------VEGAIEILKSMGDA 274
LI C G T + V A E ++ M
Sbjct: 518 TLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSD 577
Query: 275 GIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEV 334
GI P+ +++ I S +A ++++EM HP + TY +LLK K G + E
Sbjct: 578 GILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREA 637
Query: 335 QQCL 338
++ L
Sbjct: 638 EKFL 641
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 81/338 (23%), Positives = 147/338 (43%), Gaps = 22/338 (6%)
Query: 2 NVNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELK-HLESVG 60
+++ + L ++ +M+ GL P SY +LL C DLA+ Y +K + VG
Sbjct: 383 HISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVG 442
Query: 61 RLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQA 120
R+ TY+ +I A+ + ++M G++ + V +S+LIN G + A
Sbjct: 443 RI-----TYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTA 497
Query: 121 IQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSW--KGN-KMLGSFGEGYNS 177
++ + G PN ++ +++ C A R + + +G+ + +F S
Sbjct: 498 KEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTS 557
Query: 178 NLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKA--LINE 235
K G + A ++ IL P T +++ L+ G+ KA + +E
Sbjct: 558 LCKAGKVAEAEEFMRCMTSDGIL---------PNTVSFDCLINGYGNSGEGLKAFSVFDE 608
Query: 236 MKTVGLSPNQITW-SILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESK 294
M VG P T+ S+L +C G E A + LKS+ D + Y T + +S
Sbjct: 609 MTKVGHHPTFFTYGSLLKGLCKGGHLRE-AEKFLKSLHAVPAAVDTVMYNTLLTAMCKSG 667
Query: 295 NFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVL 332
N +A++L+ EM I P+ TY +L+ + G +
Sbjct: 668 NLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTV 705
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/329 (21%), Positives = 143/329 (43%), Gaps = 15/329 (4%)
Query: 25 PDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQM 84
PD+ ++NIL+ C G + + + ++ +E G + TY+T++ + ++
Sbjct: 231 PDVATFNILINVLCAEGSFEKSSYL---MQKMEKSGYAP-TIVTYNTVLHWYCKKGRFKA 286
Query: 85 ALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILH 144
A+++ M+S GV+ + ++ LI+ + + + L +M PN +N +++
Sbjct: 287 AIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLIN 346
Query: 145 ACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTE 204
+ A + N+ML SFG N I + N ++ E
Sbjct: 347 GFSNEGKVLIASQLL-----NEML-SFGLSPNHVTFNALIDGHISEGNFKEALKMFYMME 400
Query: 205 RFPFTPTTSTYNTLLKAC--GSDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVE 262
TP+ +Y LL +++ A+ MK G+ +IT++ +ID ++
Sbjct: 401 AKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLD 460
Query: 263 GAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLL 322
A+ +L M GI PD++ Y+ I + FK A + + + PN + Y+TL+
Sbjct: 461 EAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLI 520
Query: 323 KARSKYGSVLEVQQCLAIYQDMQKAGYVR 351
+ G +++ + IY+ M G+ R
Sbjct: 521 YNCCRMGC---LKEAIRIYEAMILEGHTR 546
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/340 (20%), Positives = 141/340 (41%), Gaps = 50/340 (14%)
Query: 11 TLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYS 70
+L I+++M G P + + N +L + +G KE+ ++ DV T++
Sbjct: 182 SLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKR----KICPDVATFN 237
Query: 71 TIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLA 130
+I V ++ + + M +G V ++++++ G + AI+L + M
Sbjct: 238 ILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSK 297
Query: 131 GCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTV 190
G + + +N+++H + C+ +R KG +L ++++ IH
Sbjct: 298 GVDADVCTYNMLIH---DLCRSNRI------AKGYLLL--------RDMRKRMIH----- 335
Query: 191 PNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSD--YYHAKALINEMKTVGLSPNQITW 248
P TYNTL+ ++ A L+NEM + GLSPN +T+
Sbjct: 336 -------------------PNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTF 376
Query: 249 SILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKS 308
+ LID N + A+++ M G+ P ++Y + ++ F A Y MK
Sbjct: 377 NALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKR 436
Query: 309 CEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAG 348
+ +TY ++ K G + + + + +M K G
Sbjct: 437 NGVCVGRITYTGMIDGLCKNGF---LDEAVVLLNEMSKDG 473
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 91/243 (37%), Gaps = 43/243 (17%)
Query: 98 NLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFR 157
N N + LI G+++ ++++F M L G P+ N IL + V++ + +
Sbjct: 160 NSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWS 219
Query: 158 FFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNT 217
F K+ P +T+N
Sbjct: 220 FLKEMLKRKI-----------------------------------------CPDVATFNI 238
Query: 218 LLKA-CGSDYYHAKA-LINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAG 275
L+ C + + L+ +M+ G +P +T++ ++ + AIE+L M G
Sbjct: 239 LINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKG 298
Query: 276 IKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQ 335
+ DV Y I S + L +M+ IHPN VTYNTL+ S G VL
Sbjct: 299 VDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIAS 358
Query: 336 QCL 338
Q L
Sbjct: 359 QLL 361
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/339 (19%), Positives = 143/339 (42%), Gaps = 23/339 (6%)
Query: 18 MQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFA 77
M NLG PD+ + N ++ G+++ D+ E+ + L TY+ ++ ++
Sbjct: 750 MDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLT----TYNILLHGYS 805
Query: 78 DAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQ 137
K + + + G+ + + SL+ + ++E +++ + + G E +
Sbjct: 806 KRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRY 865
Query: 138 CFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPN---GF 194
FN+++ C + + AF K++ S G +L + + +V N F
Sbjct: 866 TFNMLISKCCANGEINWAFDLV------KVMTSLG----ISLDKDTCDAMVSVLNRNHRF 915
Query: 195 SNSQ-ILSFTERFPFTPTTSTYNTLLKA-CG-SDYYHAKALINEMKTVGLSPNQITWSIL 251
S+ +L + +P + Y L+ C D A + EM + P + S +
Sbjct: 916 QESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAM 975
Query: 252 IDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEI 311
+ + A +L+ M + P + ++TT + +C ++ N +AL L M +C +
Sbjct: 976 VRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGL 1035
Query: 312 HPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYV 350
+ V+YN L+ G ++ +Y++M+ G++
Sbjct: 1036 KLDLVSYNVLITGLCAKG---DMALAFELYEEMKGDGFL 1071
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 68/313 (21%), Positives = 124/313 (39%), Gaps = 24/313 (7%)
Query: 19 QNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFAD 78
QN G P++T+YNILL V + +Y+ + + + D T +++ +
Sbjct: 788 QNGG--PNLTTYNILLHGYSKRKDVSTSFLLYRSI----ILNGILPDKLTCHSLVLGICE 841
Query: 79 AKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQC 138
+ + ++ LK+ GV ++ ++ LI+ C G + A L + M G +
Sbjct: 842 SNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDT 901
Query: 139 FNIILHACVEACQYDRAFRFFH-------SWKGNKMLGSFGEGYNSNLKQGSIHNATTVP 191
+ ++ ++ + H S + K +G N + G I A V
Sbjct: 902 CDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLI----NGLCRVGDIKTAFVVK 957
Query: 192 NGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKALINEMKTVGLSPNQITWSIL 251
+I P ++ L K +D A L+ M + L P +++ L
Sbjct: 958 EEMIAHKICP-----PNVAESAMVRALAKCGKAD--EATLLLRFMLKMKLVPTIASFTTL 1010
Query: 252 IDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEI 311
+ +C NV A+E+ M + G+K D+++Y I + A LYEEMK
Sbjct: 1011 MHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGF 1070
Query: 312 HPNWVTYNTLLKA 324
N TY L++
Sbjct: 1071 LANATTYKALIRG 1083
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 141/328 (42%), Gaps = 29/328 (8%)
Query: 14 IYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTII 73
++ M GL PD T+Y LL C G V + ++ +++ + V D+ +S+++
Sbjct: 327 VFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVP----DLVCFSSMM 382
Query: 74 KVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCE 133
+F + AL + ++ AG+ + V ++ LI G++ A+ L EML GC
Sbjct: 383 SLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCA 442
Query: 134 PNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGY------NSNLKQGSIHNA 187
+ +N ILH + A + F+ + F + Y + + K G++ NA
Sbjct: 443 MDVVTYNTILHGLCKRKMLGEADKLFNEMTERAL---FPDSYTLTILIDGHCKLGNLQNA 499
Query: 188 TTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACG--SDYYHAKALINEMKTVGLSPNQ 245
+ +I TYNTLL G D AK + +M + + P
Sbjct: 500 MELFQKMKEKRI---------RLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTP 550
Query: 246 ITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEE 305
I++SIL++ ++ A + M IKP V+ + IK S N + E+
Sbjct: 551 ISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEK 610
Query: 306 MKSCEIHPNWVTYNTLLKARSKYGSVLE 333
M S P+ ++YNTL+ YG V E
Sbjct: 611 MISEGFVPDCISYNTLI-----YGFVRE 633
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 143/324 (44%), Gaps = 24/324 (7%)
Query: 18 MQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFA 77
+Q G+ PD+ +YN L+ A G L ++ ++ + + G V+TY+T+I
Sbjct: 261 VQEKGVYPDIVTYNTLISAYSSKG---LMEEAFELMNAMPGKG-FSPGVYTYNTVINGLC 316
Query: 78 DAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQ 137
++ A +V +M +G++ ++ + SL+ G V + ++F +M P+
Sbjct: 317 KHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLV 376
Query: 138 CFNIILHACVEACQYDRAFRFFHSWK------GNKMLGSFGEGYNSNLKQGSIHNATTVP 191
CF+ ++ + D+A +F+S K N + +GY ++G I A +
Sbjct: 377 CFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGY---CRKGMISVAMNLR 433
Query: 192 NGFSNSQILSFTERFPFTPTTSTYNTLLKA-CGSDYY-HAKALINEMKTVGLSPNQITWS 249
N TYNT+L C A L NEM L P+ T +
Sbjct: 434 NEMLQQGC---------AMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLT 484
Query: 250 ILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSC 309
ILID N++ A+E+ + M + I+ DV+ Y T + + + A ++ +M S
Sbjct: 485 ILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSK 544
Query: 310 EIHPNWVTYNTLLKARSKYGSVLE 333
EI P ++Y+ L+ A G + E
Sbjct: 545 EILPTPISYSILVNALCSKGHLAE 568
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/352 (21%), Positives = 151/352 (42%), Gaps = 23/352 (6%)
Query: 5 SRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKL 64
S +L L + ++ GL PD Y IL++ C G + +A ++ E+ +
Sbjct: 388 SGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCA----M 443
Query: 65 DVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLF 124
DV TY+TI+ K+ A K+ ++M + ++ + LI+ G ++ A++LF
Sbjct: 444 DVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELF 503
Query: 125 EEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLG---SFGEGYNSNLKQ 181
++M + +N +L + D A + ++L S+ N+ +
Sbjct: 504 QKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSK 563
Query: 182 GSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKA-CGS-DYYHAKALINEMKTV 239
G + A V + + I PT N+++K C S + ++ + +M +
Sbjct: 564 GHLAEAFRVWDEMISKNI---------KPTVMICNSMIKGYCRSGNASDGESFLEKMISE 614
Query: 240 GLSPNQITWSILIDICGGTENVEGAIEILKSMGD--AGIKPDVIAYTTAIKVCVESKNFK 297
G P+ I+++ LI EN+ A ++K M + G+ PDV Y + + K
Sbjct: 615 GFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMK 674
Query: 298 QALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGY 349
+A + +M ++P+ TY ++ + S + + I+ +M + G+
Sbjct: 675 EAEVVLRKMIERGVNPDRSTYTCMING---FVSQDNLTEAFRIHDEMLQRGF 723
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/254 (21%), Positives = 110/254 (43%), Gaps = 22/254 (8%)
Query: 83 QMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNII 142
++A V ++ +GV +N + ++NA G +E+ ++ G P+ +N +
Sbjct: 217 ELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTL 276
Query: 143 LHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSN------ 196
+ A + AF ++ G F G ++ TV NG
Sbjct: 277 ISAYSSKGLMEEAFELMNAMPGK----GFSPG---------VYTYNTVINGLCKHGKYER 323
Query: 197 -SQILSFTERFPFTPTTSTYNTLL-KAC-GSDYYHAKALINEMKTVGLSPNQITWSILID 253
++ + R +P ++TY +LL +AC D + + ++M++ + P+ + +S ++
Sbjct: 324 AKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMS 383
Query: 254 ICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHP 313
+ + N++ A+ S+ +AG+ PD + YT I+ A+ L EM
Sbjct: 384 LFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAM 443
Query: 314 NWVTYNTLLKARSK 327
+ VTYNT+L K
Sbjct: 444 DVVTYNTILHGLCK 457
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 66/139 (47%), Gaps = 5/139 (3%)
Query: 214 TYNTLLKACGSDYYHAKA--LINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSM 271
T N ++ A D K +++++ G+ P+ +T++ LI +E A E++ +M
Sbjct: 237 TLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAM 296
Query: 272 GDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSV 331
G P V Y T I + +++A ++ EM + P+ TY +LL K G V
Sbjct: 297 PGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDV 356
Query: 332 LEVQQCLAIYQDMQKAGYV 350
+E ++ ++ DM+ V
Sbjct: 357 VETEK---VFSDMRSRDVV 372
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 82/344 (23%), Positives = 147/344 (42%), Gaps = 28/344 (8%)
Query: 6 RDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLD 65
R + L I++ M + G+K + S I+++ C G V+ ++ + KE SV +K +
Sbjct: 203 RRIDLCLEIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEF----SVKGIKPE 258
Query: 66 VFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFE 125
+TY+TII + + + V M+ GV N V ++ L+ G + A +LF+
Sbjct: 259 AYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFD 318
Query: 126 EMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGS---FGEGYNSNLKQG 182
EM G E + + ++ RAF F + S +G + K G
Sbjct: 319 EMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVG 378
Query: 183 SIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKALINE------- 235
+ A + N + + T +NTL+ D Y K +++E
Sbjct: 379 EMGAAEILMNEMQSKGV---------NITQVVFNTLI-----DGYCRKGMVDEASMIYDV 424
Query: 236 MKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKN 295
M+ G + T + + + + A + L M + G+K ++YT I V + N
Sbjct: 425 MEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGN 484
Query: 296 FKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLA 339
++A L+ EM S + PN +TYN ++ A K G + E ++ A
Sbjct: 485 VEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRA 528
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 111/273 (40%), Gaps = 49/273 (17%)
Query: 18 MQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFA 77
MQ+ G+ +N L+ C G VD A +Y +E G + DVFT +TI F
Sbjct: 390 MQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYD---VMEQKG-FQADVFTCNTIASCFN 445
Query: 78 DAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQ 137
K + A + M GV L+TV++++LI+ G VE+A +LF EM G +PN
Sbjct: 446 RLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAI 505
Query: 138 CFNIILHA-CVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSN 196
+N++++A C KQG I A
Sbjct: 506 TYNVMIYAYC---------------------------------KQGKIKEA--------- 523
Query: 197 SQILSFTERFPFTPTTSTYNTLLKA-CGSDYY-HAKALINEMKTVGLSPNQITWSILIDI 254
++ + E P + TY +L+ C +D A L +EM GL N +T++++I
Sbjct: 524 RKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISG 583
Query: 255 CGGTENVEGAIEILKSMGDAGIKPDVIAYTTAI 287
+ A + M G D YT I
Sbjct: 584 LSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALI 616
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 104/242 (42%), Gaps = 23/242 (9%)
Query: 115 GLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSW--KGNKM----L 168
G+ E+ +++F+ M+ G + + + L A + + D F G K+ L
Sbjct: 168 GMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYSL 227
Query: 169 GSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKAC--GSDY 226
EG ++G + + + FS I P TYNT++ A D+
Sbjct: 228 TIVVEGL---CRRGEVEKSKKLIKEFSVKGI---------KPEAYTYNTIINAYVKQRDF 275
Query: 227 YHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTA 286
+ ++ MK G+ N++T+++L+++ + A ++ M + GI+ DV YT+
Sbjct: 276 SGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSL 335
Query: 287 IKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQK 346
I N K+A L++E+ + P+ TY L+ K G E+ + +MQ
Sbjct: 336 ISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVG---EMGAAEILMNEMQS 392
Query: 347 AG 348
G
Sbjct: 393 KG 394
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 136/318 (42%), Gaps = 20/318 (6%)
Query: 25 PDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQM 84
P + +N LL A + +L + ++++ L + D++TYS I F +
Sbjct: 81 PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLG----ISHDLYTYSIFINCFCRRSQLSL 136
Query: 85 ALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILH 144
AL V M G + V SSL+N H+ + A+ L ++M+ G +P+T F ++H
Sbjct: 137 ALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIH 196
Query: 145 ACVEACQYDRAFRFFHSW--KG-NKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILS 201
+ A +G L ++G N K+G I A + N ++I
Sbjct: 197 GLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARI-- 254
Query: 202 FTERFPFTPTTSTYNTLLKACGSDYYHAKA---LINEMKTVGLSPNQITWSILIDICGGT 258
+NT++ + Y H + L EM+T G+ PN +T++ LI+
Sbjct: 255 -------KANVVIFNTIIDSL-CKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNY 306
Query: 259 ENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTY 318
A +L +M + I P+V+ + I + +A L+EEM I P+ +TY
Sbjct: 307 GRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITY 366
Query: 319 NTLLKARSKYGSVLEVQQ 336
N L+ + + E +Q
Sbjct: 367 NLLINGFCMHNRLDEAKQ 384
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/332 (24%), Positives = 146/332 (43%), Gaps = 50/332 (15%)
Query: 18 MQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFA 77
M G +PD+ +Y ++ C G +DLA ++ +++ R+K +V ++TII
Sbjct: 214 MVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKME----AARIKANVVIFNTIIDSLC 269
Query: 78 DAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQ 137
+ ++A+ + +M + G+ N V ++SLIN + G A +L ML PN
Sbjct: 270 KYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVV 329
Query: 138 CFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNS 197
FN ++ A FF K K++ + E + + Q SI
Sbjct: 330 TFNALIDA------------FF---KEGKLVEA--EKLHEEMIQRSID------------ 360
Query: 198 QILSFTERFPFTPTTSTYNTLLKA-CGSDYY-HAKALINEMKTVGLSPNQITWSILIDIC 255
P T TYN L+ C + AK + M + PN T++ LI+
Sbjct: 361 ------------PDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGF 408
Query: 256 GGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNW 315
+ VE +E+ + M G+ + + YTT I+ ++ + A ++++M S + +
Sbjct: 409 CKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDI 468
Query: 316 VTYNTLLKARSKYGSVLEVQQCLAIYQDMQKA 347
+TY+ LL YG ++ L I++ +QK+
Sbjct: 469 MTYSILLHGLCSYG---KLDTALVIFKYLQKS 497
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/359 (22%), Positives = 154/359 (42%), Gaps = 58/359 (16%)
Query: 7 DLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDV 66
D+ LN+ M+ +K ++ +N ++ + C V++A D++ E+ E+ G ++ +V
Sbjct: 238 DIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEM---ETKG-IRPNV 293
Query: 67 FTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEE 126
TY+++I + W A ++ +M +N N V +++LI+A G + +A +L EE
Sbjct: 294 VTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEE 353
Query: 127 MLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHN 186
M+ +P+T +N++++ + D A + F L +I
Sbjct: 354 MIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCL-------------PNIQT 400
Query: 187 ATTVPNGF-------SNSQILSFTERFPFTPTTSTYNTLLKAC--GSDYYHAKALINEMK 237
T+ NGF ++ + T TY T+++ D A+ + +M
Sbjct: 401 YNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMV 460
Query: 238 TVGLSPNQITWSILIDICGGTENVEGAIEILK-------------------------SMG 272
+ + + +T+SIL+ ++ A+ I K +G
Sbjct: 461 SNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVG 520
Query: 273 DA-------GIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKA 324
+A IKPDV+ Y T I + ++A L+ +MK PN TYNTL++A
Sbjct: 521 EAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRA 579
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 138/324 (42%), Gaps = 46/324 (14%)
Query: 18 MQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFA 77
+Q +G P + S+ L + C A Y+E+ RL S IIKV
Sbjct: 18 LQGIGNPPTVPSFFNLCGSGCWERSFASASGDYREILR----NRL-------SDIIKV-- 64
Query: 78 DAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQ 137
A+ + DM + + V ++ L++A A E I L E+M G +
Sbjct: 65 -----DDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLY 119
Query: 138 CFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNS 197
++I ++ Q A KM+ GY + I +++ NG+ +S
Sbjct: 120 TYSIFINCFCRRSQLSLALAVLA-----KMMKL---GY-----EPDIVTLSSLLNGYCHS 166
Query: 198 QILSFTE-------RFPFTPTTSTYNTLLKACGSDYYHAKA-----LINEMKTVGLSPNQ 245
+ +S + P T T+ TL+ + H KA L+++M G P+
Sbjct: 167 KRISDAVALVDQMVEMGYKPDTFTFTTLIHGL---FLHNKASEAVALVDQMVQRGCQPDL 223
Query: 246 ITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEE 305
+T+ +++ +++ A+ +L M A IK +V+ + T I + ++ + A+ L+ E
Sbjct: 224 VTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTE 283
Query: 306 MKSCEIHPNWVTYNTLLKARSKYG 329
M++ I PN VTYN+L+ YG
Sbjct: 284 METKGIRPNVVTYNSLINCLCNYG 307
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE LENGTH=711
Length = 711
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 77/322 (23%), Positives = 140/322 (43%), Gaps = 51/322 (15%)
Query: 30 YNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVK 89
YN+ +K+ + L ++M E+ ++LD TYSTII L+ A++
Sbjct: 189 YNVTMKSLRFGRQFQLIEEMALEMVK----DGVELDNITYSTIITCAKRCNLYNKAIEWF 244
Query: 90 HDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEA 149
M G+ + V +S++++ + +G VE+ + L+E + G +P+ F+++ EA
Sbjct: 245 ERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEA 304
Query: 150 CQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFT 209
YD R+ +L +
Sbjct: 305 GDYD-GIRY----------------------------------------VLQEMKSMDVK 323
Query: 210 PTTSTYNTLLKACGSDYYH--AKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEI 267
P YNTLL+A G A++L NEM GL+PN+ T + L+ I G A+++
Sbjct: 324 PNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQL 383
Query: 268 LKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMK-SCEIHPNWVTYNTLLKARS 326
+ M D I Y T + +C + ++A L+ +MK S + P+ +Y +L
Sbjct: 384 WEEMKAKKWPMDFILYNTLLNMCADIGLEEEAERLFNDMKESVQCRPDNFSYTAMLNI-- 441
Query: 327 KYGSVLEVQQCLAIYQDMQKAG 348
YGS + ++ + ++++M KAG
Sbjct: 442 -YGSGGKAEKAMELFEEMLKAG 462
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 121/293 (41%), Gaps = 48/293 (16%)
Query: 15 YQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIK 74
++ M GL PD +Y+ +L +G+V+ +Y+ + G K D +S + K
Sbjct: 244 FERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYE---RAVATG-WKPDAIAFSVLGK 299
Query: 75 VFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEP 134
+F +A + V +M+S V N V +++L+ A AG A LF EML AG P
Sbjct: 300 MFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTP 359
Query: 135 NTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGF 194
N + ++ +A A + + K K F
Sbjct: 360 NEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDF----------------------- 396
Query: 195 SNSQILSFTERFPFTPTTSTYNTLLKACGSD--YYHAKALINEMK-TVGLSPNQITWSIL 251
IL YNTLL C A+ L N+MK +V P+ +++ +
Sbjct: 397 ----IL--------------YNTLLNMCADIGLEEEAERLFNDMKESVQCRPDNFSYTAM 438
Query: 252 IDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYE 304
++I G E A+E+ + M AG++ +V+ T ++ ++K + +++
Sbjct: 439 LNIYGSGGKAEKAMELFEEMLKAGVQVNVMGCTCLVQCLGKAKRIDDVVYVFD 491
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 84/148 (56%), Gaps = 5/148 (3%)
Query: 14 IYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTII 73
+ Q M+++ +KP++ YN LL+A AG+ LA+ ++ E+ LE+ L + T + ++
Sbjct: 313 VLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEM--LEA--GLTPNEKTLTALV 368
Query: 74 KVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLA-GC 132
K++ A+ + AL++ +M++ ++ + +++L+N CA GL E+A +LF +M + C
Sbjct: 369 KIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLNMCADIGLEEEAERLFNDMKESVQC 428
Query: 133 EPNTQCFNIILHACVEACQYDRAFRFFH 160
P+ + +L+ + ++A F
Sbjct: 429 RPDNFSYTAMLNIYGSGGKAEKAMELFE 456
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/268 (20%), Positives = 107/268 (39%), Gaps = 42/268 (15%)
Query: 12 LNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYST 71
L++Y+ G KPD ++++L K AG D + + +E+K ++ +K +V Y+T
Sbjct: 276 LSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMD----VKPNVVVYNT 331
Query: 72 IIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAG 131
+++ A +A + ++M AG+ N ++L+ A A+QL+EEM
Sbjct: 332 LLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKK 391
Query: 132 CEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVP 191
+ +N +L+ C + + A R F+ K + P
Sbjct: 392 WPMDFILYNTLLNMCADIGLEEEAERLFNDMK---------------------ESVQCRP 430
Query: 192 NGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKALINEMKTVGLSPNQITWSIL 251
+ FS + +L+ + G A L EM G+ N + + L
Sbjct: 431 DNFSYTAMLN-----------------IYGSGGKAEKAMELFEEMLKAGVQVNVMGCTCL 473
Query: 252 IDICGGTENVEGAIEILKSMGDAGIKPD 279
+ G + ++ + + G+KPD
Sbjct: 474 VQCLGKAKRIDDVVYVFDLSIKRGVKPD 501
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 85/414 (20%), Positives = 165/414 (39%), Gaps = 71/414 (17%)
Query: 3 VNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKEL--KHLES-- 58
V S DL +Y+ M G+ P++ +Y IL+K C GR+ A MY ++ + +E
Sbjct: 367 VKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSI 426
Query: 59 ------------VGRLK---------------LDVFTYSTIIKVFADAKLWQMALKVKHD 91
G L+ DV Y ++ + L A++
Sbjct: 427 VTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVK 486
Query: 92 MRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACV---E 148
M + LN V ++SLI+ ++A+++F M + G +P+ F ++ +
Sbjct: 487 MLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDA 546
Query: 149 ACQYDR---AFRFFHSWKGNKMLGSFG------------------EGYNSNLKQGSIHNA 187
C++ + + F + NK+ + +NL +G +
Sbjct: 547 FCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPD 606
Query: 188 TTVPN----GFSNSQILSFTERF-------PFTPTTSTYNTLLKAC--GSDYYHAKALIN 234
N G+ + + L ER PF P T T L+ +D A + +
Sbjct: 607 IVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFS 666
Query: 235 EMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESK 294
M G PN +T+ L+D + ++EG+ ++ + M + GI P +++Y+ I +
Sbjct: 667 IMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRG 726
Query: 295 NFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAG 348
+A ++ + ++ P+ V Y L++ K G ++E +Y+ M + G
Sbjct: 727 RVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAA---LLYEHMLRNG 777
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/325 (22%), Positives = 141/325 (43%), Gaps = 32/325 (9%)
Query: 13 NIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTI 72
+ ++ + G P++ ++ L+ C G +D A D++K + E G ++ D+ YST+
Sbjct: 272 RLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVM---EQRG-IEPDLIAYSTL 327
Query: 73 IKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGC 132
I + A + M K+ GV L+ V +SS I+ +G + A +++ ML G
Sbjct: 328 IDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGI 387
Query: 133 EPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPN 192
PN + I++ CQ R + F G +G+ + + SI +++ +
Sbjct: 388 SPNVVTYTILIKGL---CQDGRIYEAF---------GMYGQILKRGM-EPSIVTYSSLID 434
Query: 193 GF-------SNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKALINEMKTVGLSP-- 243
GF S + + + P Y L+ A+ +K +G S
Sbjct: 435 GFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRL 494
Query: 244 NQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQ----- 298
N + ++ LID + A+++ + MG GIKPDV +TT ++V + F +
Sbjct: 495 NVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPT 554
Query: 299 -ALTLYEEMKSCEIHPNWVTYNTLL 322
L L++ M+ +I + N ++
Sbjct: 555 IGLQLFDLMQRNKISADIAVCNVVI 579
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/329 (20%), Positives = 138/329 (41%), Gaps = 23/329 (6%)
Query: 22 GLKPD-MTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAK 80
G++P ++++ +L A G V A D ++ + ++ + + + ++K + +
Sbjct: 211 GIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERG----FRVGIVSCNKVLKGLSVDQ 266
Query: 81 LWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFN 140
+ ++A ++ + G N V + +LIN G +++A LF+ M G EP+ ++
Sbjct: 267 I-EVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYS 325
Query: 141 IILHACVEACQYDRAFRFFHS--WKGNKM-LGSFGEGYNSNLKQGSIHNATTVPNGFSNS 197
++ +A + F KG K+ + F + +K G + A+ V
Sbjct: 326 TLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQ 385
Query: 198 QILSFTERFPFTPTTSTYNTLLKACGSD--YYHAKALINEMKTVGLSPNQITWSILIDIC 255
I +P TY L+K D Y A + ++ G+ P+ +T+S LID
Sbjct: 386 GI---------SPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGF 436
Query: 256 GGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNW 315
N+ + + M G PDV+ Y + + A+ +M I N
Sbjct: 437 CKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNV 496
Query: 316 VTYNTLLKA---RSKYGSVLEVQQCLAIY 341
V +N+L+ +++ L+V + + IY
Sbjct: 497 VVFNSLIDGWCRLNRFDEALKVFRLMGIY 525
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 77/174 (44%), Gaps = 20/174 (11%)
Query: 189 TVPNGFSNS-------QILSFTERFPFTPTTSTYNTLLKACGSDYYHA------KALINE 235
T+ NGF + E+ P Y+TL+ Y+ A L ++
Sbjct: 291 TLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDG----YFKAGMLGMGHKLFSQ 346
Query: 236 MKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKN 295
G+ + + +S ID+ + ++ A + K M GI P+V+ YT IK +
Sbjct: 347 ALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGR 406
Query: 296 FKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGY 349
+A +Y ++ + P+ VTY++L+ K G+ ++ A+Y+DM K GY
Sbjct: 407 IYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGN---LRSGFALYEDMIKMGY 457
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 81/326 (24%), Positives = 138/326 (42%), Gaps = 32/326 (9%)
Query: 5 SRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVD----LAQDMYKELKHLESVG 60
+R L + + ++ M G +P++ +YN L+ C GR L +DM K
Sbjct: 201 NRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKR-------- 252
Query: 61 RLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQA 120
R++ +V T++ +I F A ++ + M V + + SLIN GL+++A
Sbjct: 253 RIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEA 312
Query: 121 IQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGS------FGEG 174
Q+F M GC PN + ++H ++ + + + F+ ++ + +G
Sbjct: 313 RQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQG 372
Query: 175 YNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKA--CGSDYYHAKAL 232
Y G A V N S + R P P TYN LL C A +
Sbjct: 373 Y---CLVGRPDVAQEVFNQMS-------SRRAP--PDIRTYNVLLDGLCCNGKVEKALMI 420
Query: 233 INEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVE 292
M+ + N +T++I+I VE A ++ S+ G+KP+VI YTT I
Sbjct: 421 FEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCR 480
Query: 293 SKNFKQALTLYEEMKSCEIHPNWVTY 318
+A +L+++MK PN Y
Sbjct: 481 RGLIHEADSLFKKMKEDGFLPNESVY 506
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 109/256 (42%), Gaps = 25/256 (9%)
Query: 102 VAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHS 161
+ ++ L++ A + I LFE+M + G P NI++H + Q RA F
Sbjct: 84 IDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFL-- 141
Query: 162 WKGNKM-------LGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTST 214
G M L +F N I +A + + QIL F P T
Sbjct: 142 --GKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFD-----QILGMG----FKPNVVT 190
Query: 215 YNTLLKACGSDYY--HAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMG 272
Y TL++ + + HA L N+M T G PN +T++ L+ A +L+ M
Sbjct: 191 YTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMM 250
Query: 273 DAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVL 332
I+P+VI +T I V+ +A LY M ++P+ TY +L+ YG +
Sbjct: 251 KRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLD 310
Query: 333 EVQQCLAIYQDMQKAG 348
E +Q ++ M++ G
Sbjct: 311 EARQ---MFYLMERNG 323
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/343 (20%), Positives = 145/343 (42%), Gaps = 25/343 (7%)
Query: 11 TLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYS 70
+++++ MQ LG+ P + + NI++ C++ + A ++ L + D+ T++
Sbjct: 102 VISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLG----FEPDLVTFT 157
Query: 71 TIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLA 130
+++ + + A+ + + G N V +++LI + A++LF +M
Sbjct: 158 SLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTN 217
Query: 131 GCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKM---LGSFGEGYNSNLKQGSIHNA 187
G PN +N ++ E ++ A ++ + +F ++ +K G + A
Sbjct: 218 GSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEA 277
Query: 188 TTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYY----HAKALINEMKTVGLSP 243
+ N + P TY +L+ G Y A+ + M+ G P
Sbjct: 278 KELYNVMIQMSVY---------PDVFTYGSLIN--GLCMYGLLDEARQMFYLMERNGCYP 326
Query: 244 NQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLY 303
N++ ++ LI ++ VE ++I M G+ + I YT I+ A ++
Sbjct: 327 NEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVF 386
Query: 304 EEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQK 346
+M S P+ TYN LL G +V++ L I++ M+K
Sbjct: 387 NQMSSRRAPPDIRTYNVLLDGLCCNG---KVEKALMIFEYMRK 426
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 74/327 (22%), Positives = 147/327 (44%), Gaps = 28/327 (8%)
Query: 15 YQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIK 74
+ M++ G PD +++I++ R AQ + LK R + DV Y+ +++
Sbjct: 209 FNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLK-----DRFEPDVIVYTNLVR 263
Query: 75 VFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEP 134
+ A A KV +M+ AG+ N +S +I+A G + +A +F +ML +GC P
Sbjct: 264 GWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAP 323
Query: 135 NTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNL------KQGSIHNAT 188
N FN ++ V+A + ++ + ++ K LG + N + ++ NA
Sbjct: 324 NAITFNNLMRVHVKAGRTEKVLQVYNQMKK---LGCEPDTITYNFLIEAHCRDENLENAV 380
Query: 189 TVPNGFSNSQILSFTERFPFTPTTSTYNTLLKAC--GSDYYHAKALINEMKTVGLSPNQI 246
V N + ST+NT+ + D A + ++M PN +
Sbjct: 381 KVLNTMIKKKC---------EVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTV 431
Query: 247 TWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEM 306
T++IL+ + G+++ + +++ K M D ++P+V Y + + ++ A L++EM
Sbjct: 432 TYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEM 491
Query: 307 --KSCEIHPNWVTYNTLLKARSKYGSV 331
+ C + P+ Y +L + G +
Sbjct: 492 VEEKC-LTPSLSLYEMVLAQLRRAGQL 517
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 104/258 (40%), Gaps = 44/258 (17%)
Query: 69 YSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEML 128
Y+ +I + + + +A + M+S V ++ ++ LI AGL +A+ F M
Sbjct: 154 YNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRME 213
Query: 129 LAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNAT 188
GC P+ F+I++ + A FF S K
Sbjct: 214 DYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDR----------------------- 250
Query: 189 TVPNGFSNSQILSFTERFPFTPTTSTYNTLLKA-C-GSDYYHAKALINEMKTVGLSPNQI 246
F P Y L++ C + A+ + EMK G+ PN
Sbjct: 251 -------------------FEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVY 291
Query: 247 TWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEM 306
T+SI+ID + A ++ M D+G P+ I + ++V V++ ++ L +Y +M
Sbjct: 292 TYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQM 351
Query: 307 KSCEIHPNWVTYNTLLKA 324
K P+ +TYN L++A
Sbjct: 352 KKLGCEPDTITYNFLIEA 369
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 55/115 (47%), Gaps = 4/115 (3%)
Query: 234 NEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVES 293
N M+ G P++I +SI+I A S+ D +PDVI YT ++ +
Sbjct: 210 NRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDR-FEPDVIVYTNLVRGWCRA 268
Query: 294 KNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAG 348
+A +++EMK I PN TY+ ++ A + G ++ + ++ DM +G
Sbjct: 269 GEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCG---QISRAHDVFADMLDSG 320
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 80/339 (23%), Positives = 148/339 (43%), Gaps = 53/339 (15%)
Query: 12 LNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYST 71
+ + +++N GL+PD +YN LL AC +D A ++++++ R + D++TY+
Sbjct: 282 VELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDME----AHRCQPDLWTYNA 337
Query: 72 IIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAG 131
+I V+ L A ++ ++ G + V ++SL+ A A E+ +++++M G
Sbjct: 338 MISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMG 397
Query: 132 CEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVP 191
+ +N I+H + Q D A + + KG G N
Sbjct: 398 FGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLS-------GRN--------------- 435
Query: 192 NGFSNSQILSFTERFPFTPTTSTYNTLLKACG--SDYYHAKALINEMKTVGLSPNQITWS 249
P TY L+ + G + A AL++EM VG+ P T+S
Sbjct: 436 ------------------PDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYS 477
Query: 250 ILIDICGGTE--NVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMK 307
L ICG + E A + M +G KPD +AY+ + V + ++A LY +M
Sbjct: 478 AL--ICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMI 535
Query: 308 SCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQK 346
S P++ Y ++ K ++Q+ + +DM++
Sbjct: 536 SDGHTPSYTLYELMILGLMKENRSDDIQKTI---RDMEE 571
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/283 (21%), Positives = 127/283 (44%), Gaps = 13/283 (4%)
Query: 69 YSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEML 128
Y+ II+ + KLWQ A V ++R +G + W+SL++A A G E+A +F M+
Sbjct: 755 YTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMM 814
Query: 129 LAGCEPNTQCFNIILHA-CVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNA 187
G P + NI+LHA CV+ R + + L G + + +
Sbjct: 815 RDGPSPTVESINILLHALCVDG-------RLEELYVVVEELQDMGFKISKSSILLMLDAF 867
Query: 188 TTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKAC--GSDYYHAKALINEMKTVGLSPNQ 245
N F +I S + + PT Y +++ G A+ +++EM+
Sbjct: 868 ARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVEL 927
Query: 246 ITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEE 305
W+ ++ + E+ + +++ + + + G++PD Y T I + + ++ L ++
Sbjct: 928 AIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQ 987
Query: 306 MKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAG 348
M++ + P TY +L+ A +G ++Q +++++ G
Sbjct: 988 MRNLGLDPKLDTYKSLISA---FGKQKCLEQAEQLFEELLSKG 1027
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/334 (21%), Positives = 131/334 (39%), Gaps = 47/334 (14%)
Query: 14 IYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTII 73
I+ M G P + S NILL A CV GR+ +++Y ++ L+ +G K+ + ++
Sbjct: 809 IFNTMMRDGPSPTVESINILLHALCVDGRL---EELYVVVEELQDMG-FKISKSSILLML 864
Query: 74 KVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCE 133
FA A K+ M++AG + +I V A + EM A +
Sbjct: 865 DAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFK 924
Query: 134 PNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNG 193
+N +L Y + + + K +
Sbjct: 925 VELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGL-------------------------- 958
Query: 194 FSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKA--LINEMKTVGLSPNQITWSIL 251
P +TYNTL+ D + L+ +M+ +GL P T+ L
Sbjct: 959 ---------------EPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSL 1003
Query: 252 IDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEI 311
I G + +E A ++ + + G+K D Y T +K+ +S + +A L + MK+ I
Sbjct: 1004 ISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGI 1063
Query: 312 HPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQ 345
P T + L+ + S G+ E ++ L+ +D +
Sbjct: 1064 EPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTE 1097
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 76/144 (52%), Gaps = 7/144 (4%)
Query: 210 PTTSTYNTL----LKACGSDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAI 265
P ++NTL LK+ G A L++ ++ GL P+ IT++ L+ C N++GA+
Sbjct: 258 PDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAV 317
Query: 266 EILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKAR 325
++ + M +PD+ Y I V +A L+ E++ P+ VTYN+LL A
Sbjct: 318 KVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAF 377
Query: 326 SKYGSVLEVQQCLAIYQDMQKAGY 349
++ + +V++ +YQ MQK G+
Sbjct: 378 ARERNTEKVKE---VYQQMQKMGF 398
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 113/271 (41%), Gaps = 45/271 (16%)
Query: 7 DLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVG-RLKLD 65
D T+ +YQ ++ GL+PD T+YN L+ C R ++ Y ++ + ++G KLD
Sbjct: 942 DYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRR---PEEGYLLMQQMRNLGLDPKLD 998
Query: 66 VFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFE 125
TY ++I F K + A ++ ++ S G+ L+ + +++ +G +A +L +
Sbjct: 999 --TYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQ 1056
Query: 126 EMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIH 185
M AG EP ++++ + +S GN E SNLK +
Sbjct: 1057 MMKNAGIEPTLATMHLLMVS--------------YSSSGNP---QEAEKVLSNLKDTEVE 1099
Query: 186 NATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKALINEMKTVGLSPNQ 245
T P +S + L++ DY + EMK GL P+
Sbjct: 1100 LTTL--------------------PYSSVIDAYLRS--KDYNSGIERLLEMKKEGLEPDH 1137
Query: 246 ITWSILIDICGGTENVEGAIEILKSMGDAGI 276
W+ + ++ + +LK++ D G
Sbjct: 1138 RIWTCFVRAASFSKEKIEVMLLLKALEDIGF 1168
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/305 (20%), Positives = 136/305 (44%), Gaps = 30/305 (9%)
Query: 14 IYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTII 73
IY M+ G P + Y ++++ C RV A+ M E++ K+++ +++++
Sbjct: 879 IYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEE----ANFKVELAIWNSML 934
Query: 74 KVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCE 133
K++ + ++ ++V ++ G+ + +++LI E+ L ++M G +
Sbjct: 935 KMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLD 994
Query: 134 PNTQCFNIILHA-----CVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLK----QGSI 184
P + ++ A C+E Q ++ F S KG K+ SF Y++ +K GS
Sbjct: 995 PKLDTYKSLISAFGKQKCLE--QAEQLFEELLS-KGLKLDRSF---YHTMMKISRDSGSD 1048
Query: 185 HNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGS--DYYHAKALINEMKTVGLS 242
A + N+ I PT +T + L+ + S + A+ +++ +K +
Sbjct: 1049 SKAEKLLQMMKNAGI---------EPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVE 1099
Query: 243 PNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTL 302
+ +S +ID +++ IE L M G++PD +T ++ SK + + L
Sbjct: 1100 LTTLPYSSVIDAYLRSKDYNSGIERLLEMKKEGLEPDHRIWTCFVRAASFSKEKIEVMLL 1159
Query: 303 YEEMK 307
+ ++
Sbjct: 1160 LKALE 1164
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 80/350 (22%), Positives = 155/350 (44%), Gaps = 35/350 (10%)
Query: 11 TLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYS 70
L ++ M +G KP++ YN ++ C + +VD A D+ L +E G + DV TY+
Sbjct: 170 ALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDL---LNRMEKDG-IGPDVVTYN 225
Query: 71 TIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLA 130
++I + W A ++ M + + +++LI+AC G V +A + +EEM+
Sbjct: 226 SLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRR 285
Query: 131 GCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATT- 189
+P+ ++++++ C Y R L E + + +G + T
Sbjct: 286 SLDPDIVTYSLLIYG---LCMYSR-------------LDEAEEMFGFMVSKGCFPDVVTY 329
Query: 190 --VPNGFSNSQILS-----FTE--RFPFTPTTSTYNTLLKA-CGSDYYH-AKALINEMKT 238
+ NG+ S+ + F E + T TY L++ C + + A+ + M
Sbjct: 330 SILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVF 389
Query: 239 VGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQ 298
G+ PN IT+++L+ +E A+ IL M G+ D++ Y I+ ++
Sbjct: 390 CGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVAD 449
Query: 299 ALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAG 348
A +Y + + P+ TY T++ K G E A+++ M++ G
Sbjct: 450 AWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREAD---ALFRKMKEDG 496
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/340 (22%), Positives = 146/340 (42%), Gaps = 21/340 (6%)
Query: 14 IYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTII 73
+++ MQ LG+ ++ + NILL C ++ LA ++ L + + T+ +++
Sbjct: 103 LWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGH----EPSIVTFGSLL 158
Query: 74 KVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCE 133
F AL + M G N V ++++I+ + V+ A+ L M G
Sbjct: 159 NGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIG 218
Query: 134 PNTQCFNIILHACVEACQYDRAFRFFHSWKGNKM---LGSFGEGYNSNLKQGSIHNATTV 190
P+ +N ++ + ++ A R ++ + +F ++ +K+G + A
Sbjct: 219 PDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEE- 277
Query: 191 PNGFSNSQILSFTERFPFTPTTSTYNTLLKACG--SDYYHAKALINEMKTVGLSPNQITW 248
F I R P TY+ L+ S A+ + M + G P+ +T+
Sbjct: 278 ---FYEEMI-----RRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTY 329
Query: 249 SILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKS 308
SILI+ ++ VE +++ M G+ + + YT I+ + A ++ M
Sbjct: 330 SILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVF 389
Query: 309 CEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAG 348
C +HPN +TYN LL G ++++ L I DMQK G
Sbjct: 390 CGVHPNIITYNVLLHGLCDNG---KIEKALVILADMQKNG 426
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 18/236 (7%)
Query: 15 YQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIK 74
Y+ M L PD+ +Y++L+ C+ R+D A++M+ + S G DV TYS +I
Sbjct: 279 YEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFG---FMVSKGCFP-DVVTYSILIN 334
Query: 75 VFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEP 134
+ +K + +K+ +M GV NTV ++ LI AG + A ++F M+ G P
Sbjct: 335 GYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHP 394
Query: 135 NTQCFNIILHACVEACQYDRAFRFFHSWKGNKM---LGSFGEGYNSNLKQGSIHNATTVP 191
N +N++LH + + ++A + N M + ++ K G + +A +
Sbjct: 395 NIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIY 454
Query: 192 NGFSNSQILSFTERFPFTPTTSTYNTLLKACGSD--YYHAKALINEMKTVGLSPNQ 245
+ ++ P TY T++ A AL +MK G+ PN+
Sbjct: 455 CSLNCQGLM---------PDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPNE 501
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 106/242 (43%), Gaps = 31/242 (12%)
Query: 117 VEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYN 176
++ ++ LF M+ P+ F+ +L A + +YD + W+ +MLG
Sbjct: 62 LDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVI---YLWEQMQMLGI------ 112
Query: 177 SNLKQGSIHNATT---VPNGFSNSQILSFTERF-------PFTPTTSTYNTLLKA-C-GS 224
HN T + N F LS F P+ T+ +LL C G
Sbjct: 113 -------PHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGD 165
Query: 225 DYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYT 284
Y A + ++M +G PN + ++ +ID ++ V+ A+++L M GI PDV+ Y
Sbjct: 166 RVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYN 225
Query: 285 TAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDM 344
+ I S + A + M EI+P+ T+N L+ A K G V E ++ Y++M
Sbjct: 226 SLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEE---FYEEM 282
Query: 345 QK 346
+
Sbjct: 283 IR 284
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 133/293 (45%), Gaps = 27/293 (9%)
Query: 69 YSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEML 128
+S ++ + K + + + + M+ G+ N + L+N + A+ +M+
Sbjct: 84 FSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMI 143
Query: 129 LAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNAT 188
G EP+ F +L+ C+ DR + + + ++M+G GY N+ I+N
Sbjct: 144 KLGHEPSIVTFGSLLNG---FCRGDRVYDALYMF--DQMVGM---GYKPNV---VIYN-- 190
Query: 189 TVPNGFSNSQ-------ILSFTERFPFTPTTSTYNTLLKA-CGSDYY-HAKALINEMKTV 239
T+ +G S+ +L+ E+ P TYN+L+ C S + A +++ M
Sbjct: 191 TIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKR 250
Query: 240 GLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAI-KVCVESKNFKQ 298
+ P+ T++ LID C V A E + M + PD++ Y+ I +C+ S+ +
Sbjct: 251 EIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSR-LDE 309
Query: 299 ALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYVR 351
A ++ M S P+ VTY+ L+ Y +V+ + ++ +M + G VR
Sbjct: 310 AEEMFGFMVSKGCFPDVVTYSILING---YCKSKKVEHGMKLFCEMSQRGVVR 359
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 81/342 (23%), Positives = 144/342 (42%), Gaps = 45/342 (13%)
Query: 8 LTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVF 67
+ Y N++ M G+ PD +SY +++ C G++ Q+ + L + G + D
Sbjct: 198 IEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKI---QEADRWLTGMIQRGFIP-DNA 253
Query: 68 TYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEM 127
T + I+ + L A+ M G N + ++SLI+ G ++QA ++ EEM
Sbjct: 254 TCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEM 313
Query: 128 LLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNA 187
+ G +PN ++ + ++AFR F K++ S + Y N +H
Sbjct: 314 VRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFL-----KLVRS--DTYKPN-----VHTY 361
Query: 188 TTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKALINEMKTVGLSPNQIT 247
T++ G+ L+ A+ L + MK GL PN T
Sbjct: 362 TSMIGGYCKEDKLN--------------------------RAEMLFSRMKEQGLFPNVNT 395
Query: 248 WSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMK 307
++ LI+ + A E++ MGD G P++ Y AI + +A L +
Sbjct: 396 YTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAF 455
Query: 308 SCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGY 349
SC + + VTY L++ + K ++ Q LA + M K G+
Sbjct: 456 SCGLEADGVTYTILIQEQCKQN---DINQALAFFCRMNKTGF 494
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 84/321 (26%), Positives = 137/321 (42%), Gaps = 50/321 (15%)
Query: 7 DLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDV 66
DLT + M G P+ +YN L+ C+ G++D A + L+ + S + DV
Sbjct: 272 DLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSL---LERMVSSKCIPNDV 328
Query: 67 FTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEE 126
TY T+I + A+++ M G +LN +S LI+ G E+A+ L+ +
Sbjct: 329 -TYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRK 387
Query: 127 MLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHN 186
M GC+PN +++++ + + A N+M+ S
Sbjct: 388 MAEKGCKPNIVVYSVLVDGLCREGKPNEAKEIL-----NRMIAS---------------- 426
Query: 187 ATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKALI--NEMKTVGLSPN 244
+PN + TY++L+K +A+ EM G S N
Sbjct: 427 -GCLPNAY-------------------TYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRN 466
Query: 245 QITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYE 304
+ +S+LID G V+ A+ + M GIKPD +AY++ IK + AL LY
Sbjct: 467 KFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYH 526
Query: 305 EM---KSCEIHPNWVTYNTLL 322
EM + + P+ VTYN LL
Sbjct: 527 EMLCQEEPKSQPDVVTYNILL 547
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/356 (21%), Positives = 147/356 (41%), Gaps = 38/356 (10%)
Query: 20 NLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADA 79
N+ + P+ S+N+++KA C VD A ++++ + + + D +TY T++
Sbjct: 180 NMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLP----DGYTYCTLMDGLCKE 235
Query: 80 KLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCF 139
+ A+ + +M+S G + + V ++ LI+ G + + +L + M L GC PN +
Sbjct: 236 ERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTY 295
Query: 140 NIILHACVEACQYDRAFRFFHSWKGNKMLG---SFGEGYNSNLKQGSIHNATTVPNGFS- 195
N ++H + D+A +K + ++G N +KQ +A + +
Sbjct: 296 NTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEE 355
Query: 196 -----NSQILSFTERFPFT--------------------PTTSTYNTLLKACGSD--YYH 228
N I S F P Y+ L+ +
Sbjct: 356 RGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNE 415
Query: 229 AKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIK 288
AK ++N M G PN T+S L+ T E A+++ K M G + Y+ I
Sbjct: 416 AKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLID 475
Query: 289 VCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDM 344
K+A+ ++ +M + I P+ V Y++++K GS + L +Y +M
Sbjct: 476 GLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGS---MDAALKLYHEM 528
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 137/319 (42%), Gaps = 42/319 (13%)
Query: 51 KELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINA 110
K K +G KL T S++I+ +A++ + K+ +R + ++ + A
Sbjct: 62 KMFKSAPKMGSFKLGDSTLSSMIESYANSGDFDSVEKLLSRIRLENRVIIERSFIVVFRA 121
Query: 111 CAHAGLVEQAIQLFEEMLLA-GCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLG 169
A L ++A+ LF M+ C+ + + FN +L+ + Y R F+
Sbjct: 122 YGKAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYV------- 174
Query: 170 SFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFT----------------PTTS 213
NSN+ N PNG S + ++ + F P
Sbjct: 175 -----VNSNM------NMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGY 223
Query: 214 TYNTLLKA-CGSDYY-HAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSM 271
TY TL+ C + A L++EM++ G SP+ + +++LID ++ +++ +M
Sbjct: 224 TYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNM 283
Query: 272 GDAGIKPDVIAYTTAIK-VCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGS 330
G P+ + Y T I +C++ K +A++L E M S + PN VTY TL+ K
Sbjct: 284 FLKGCVPNEVTYNTLIHGLCLKGK-LDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRR 342
Query: 331 VLEVQQCLAIYQDMQKAGY 349
+ + L+ M++ GY
Sbjct: 343 ATDAVRLLS---SMEERGY 358
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/297 (20%), Positives = 123/297 (41%), Gaps = 31/297 (10%)
Query: 67 FTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEE 126
+++ +IK + A++V M + + +L++ +++A+ L +E
Sbjct: 188 LSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDE 247
Query: 127 MLLAGCEPNTQCFNIILHACVEACQYDRAFR-----FFHSWKGNKMLGSFGEGYNSNLK- 180
M GC P+ +N+++ + R + F N++ YN+ +
Sbjct: 248 MQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVT------YNTLIHG 301
Query: 181 ---QGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKA--LINE 235
+G + A ++ +S+ + P TY TL+ A L++
Sbjct: 302 LCLKGKLDKAVSLLERMVSSKCI---------PNDVTYGTLINGLVKQRRATDAVRLLSS 352
Query: 236 MKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIK-VCVESK 294
M+ G NQ +S+LI E A+ + + M + G KP+++ Y+ + +C E K
Sbjct: 353 MEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGK 412
Query: 295 NFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYVR 351
+A + M + PN TY++L+K K G E Q ++++M K G R
Sbjct: 413 P-NEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQ---VWKEMDKTGCSR 465
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 146/320 (45%), Gaps = 16/320 (5%)
Query: 7 DLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDV 66
D LN+ M+ +KPD+ Y+ ++ C G AQ ++ E+ LE + +V
Sbjct: 276 DTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEM--LEK--GIAPNV 331
Query: 67 FTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEE 126
FTY+ +I F W A ++ DM +N + + +++LI+A G + +A +L +E
Sbjct: 332 FTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDE 391
Query: 127 MLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHN 186
ML P+T +N +++ + ++D A F ++ +N+ +
Sbjct: 392 MLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVV-----TFNTIIDVYC--R 444
Query: 187 ATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKA-CGSDYYH-AKALINEMKTVGLSPN 244
A V G Q+L R T+TYNTL+ C D + A+ L EM + G+ P+
Sbjct: 445 AKRVDEGM---QLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPD 501
Query: 245 QITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYE 304
IT +IL+ E +E A+E+ + + + I D +AY I + +A L+
Sbjct: 502 TITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFC 561
Query: 305 EMKSCEIHPNWVTYNTLLKA 324
+ + P+ TYN ++
Sbjct: 562 SLPIHGVEPDVQTYNVMISG 581
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/352 (23%), Positives = 150/352 (42%), Gaps = 41/352 (11%)
Query: 14 IYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGR-LKLDVFTYSTI 72
++ M +GL P + ++N L+ C+ GRV A + ++ VG+ L +DV TY TI
Sbjct: 213 LFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKM-----VGKGLHIDVVTYGTI 267
Query: 73 IKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGC 132
+ + AL + M + + V +S++I+ G A LF EML G
Sbjct: 268 VNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGI 327
Query: 133 EPNTQCFNIILHACVEACQYDRAFRFFHSW---KGNKMLGSFGEGYNSNLKQGSIHNATT 189
PN +N ++ ++ A R + N + +F ++++K+G + A
Sbjct: 328 APNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEK 387
Query: 190 V----------PNGFS-NSQILSFTERFPF-----------TPTTSTYNTLLKACGSDYY 227
+ P+ + NS I F + F +P T+NT++ Y
Sbjct: 388 LCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDV----YC 443
Query: 228 HAK------ALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVI 281
AK L+ E+ GL N T++ LI +N+ A ++ + M G+ PD I
Sbjct: 444 RAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTI 503
Query: 282 AYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLE 333
+ E++ ++AL L+E ++ +I + V YN ++ K V E
Sbjct: 504 TCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDE 555
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 136/313 (43%), Gaps = 45/313 (14%)
Query: 42 RVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNT 101
R D+A +Y++++ + R+ L++++++ +IK F D +L + G +
Sbjct: 121 RPDVAISLYRKME----IRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDV 176
Query: 102 VAWSSLINA-CAHAGLVE--------------QAIQLFEEMLLAGCEPNTQCFNIILHA- 145
V +++L++ C + E +A+ LF++M+ G P FN +++
Sbjct: 177 VTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGL 236
Query: 146 CVEACQYDRAFRFFHSWKGNKMLG--------SFGEGYNSNLKQGSIHNATTVPNGFSNS 197
C+E + A NKM+G ++G N K G +A
Sbjct: 237 CLEGRVLEAAALV------NKMVGKGLHIDVVTYGTIVNGMCKMGDTKSAL--------- 281
Query: 198 QILSFTERFPFTPTTSTYNTLLKACGSDYYHAKA--LINEMKTVGLSPNQITWSILIDIC 255
+LS E P Y+ ++ D +H+ A L +EM G++PN T++ +ID
Sbjct: 282 NLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGF 341
Query: 256 GGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNW 315
A +L+ M + I PDV+ + I V+ +A L +EM I P+
Sbjct: 342 CSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDT 401
Query: 316 VTYNTLLKARSKY 328
VTYN+++ K+
Sbjct: 402 VTYNSMIYGFCKH 414
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 109/271 (40%), Gaps = 32/271 (11%)
Query: 72 IIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAG 131
+I VF +A+ + M + LN +++ LI + ++ F ++ G
Sbjct: 112 VIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLG 171
Query: 132 CEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVP 191
+P+ FN +LH C DR ++ L FG V
Sbjct: 172 FQPDVVTFNTLLHG---LCLEDRI---------SEALALFG---------------YMVE 204
Query: 192 NGFSNSQILSFTE--RFPFTPTTSTYNTLLKAC--GSDYYHAKALINEMKTVGLSPNQIT 247
GF + L F + TP T+NTL+ A AL+N+M GL + +T
Sbjct: 205 TGFLEAVAL-FDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVT 263
Query: 248 WSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMK 307
+ +++ + + A+ +L M + IKPDV+ Y+ I + + A L+ EM
Sbjct: 264 YGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEML 323
Query: 308 SCEIHPNWVTYNTLLKARSKYGSVLEVQQCL 338
I PN TYN ++ +G + Q+ L
Sbjct: 324 EKGIAPNVFTYNCMIDGFCSFGRWSDAQRLL 354
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 98/228 (42%), Gaps = 47/228 (20%)
Query: 22 GLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKL 81
GL + T+YN L+ C ++ AQD+++E+ S G D T + ++ F + +
Sbjct: 462 GLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMI---SHGVCP-DTITCNILLYGFCENEK 517
Query: 82 WQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNI 141
+ AL++ ++ + ++L+TVA++ +I+ V++A LF + + G EP+ Q +N+
Sbjct: 518 LEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNV 577
Query: 142 ILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILS 201
++ A FH K N G+
Sbjct: 578 MISGFCGKSAISDANVLFHKMKDN--------GHE------------------------- 604
Query: 202 FTERFPFTPTTSTYNTLLKAC--GSDYYHAKALINEMKTVGLSPNQIT 247
P STYNTL++ C + + LI+EM++ G S + T
Sbjct: 605 --------PDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFT 644
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 61/124 (49%), Gaps = 4/124 (3%)
Query: 8 LTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVF 67
L L +++++Q + D +YNI++ C +VD A D++ L + ++ DV
Sbjct: 518 LEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSL----PIHGVEPDVQ 573
Query: 68 TYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEM 127
TY+ +I F A + H M+ G + +++LI C AG ++++I+L EM
Sbjct: 574 TYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEM 633
Query: 128 LLAG 131
G
Sbjct: 634 RSNG 637
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/164 (20%), Positives = 73/164 (44%), Gaps = 4/164 (2%)
Query: 7 DLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDV 66
+L +++Q M + G+ PD + NILL C +++ A ++++ ++ + ++ LD
Sbjct: 482 NLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQ----MSKIDLDT 537
Query: 67 FTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEE 126
Y+ II A + + GV + ++ +I+ + A LF +
Sbjct: 538 VAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHK 597
Query: 127 MLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGS 170
M G EP+ +N ++ C++A + D++ + N G
Sbjct: 598 MKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGD 641
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/328 (23%), Positives = 149/328 (45%), Gaps = 15/328 (4%)
Query: 21 LGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAK 80
LG +P++ YN ++ + C G+V+ A D+ LKH++ +G ++ DV TY+++I +
Sbjct: 178 LGYEPNVVIYNTIIDSLCEKGQVNTALDV---LKHMKKMG-IRPDVVTYNSLITRLFHSG 233
Query: 81 LWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFN 140
W ++ ++ DM G++ + + +S+LI+ G + +A + + EM+ PN +N
Sbjct: 234 TWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYN 293
Query: 141 IILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQIL 200
+++ D A + + G F N A V +G +IL
Sbjct: 294 SLINGLCIHGLLDEAKKVLNVLVSK---GFFPNAVTYNTLINGYCKAKRVDDGM---KIL 347
Query: 201 SFTERFPFTPTTSTYNTLLKA-C-GSDYYHAKALINEMKTVGLSPNQITWSILIDICGGT 258
R T TYNTL + C + A+ ++ M + G+ P+ T++IL+D
Sbjct: 348 CVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDH 407
Query: 259 ENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTY 318
+ A+ L+ + + +I Y IK ++ + A L+ + + P+ +TY
Sbjct: 408 GKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITY 467
Query: 319 NTLLKARSKYGSVLEVQQCLAIYQDMQK 346
T++ + E + +Y+ MQK
Sbjct: 468 ITMMIGLRRKRLWREAHE---LYRKMQK 492
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/357 (22%), Positives = 146/357 (40%), Gaps = 38/357 (10%)
Query: 25 PDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQM 84
P + ++ LL A + + +++ HLE +G + D+++++T+I F +
Sbjct: 77 PSIVDFSRLLIAIAKLNKYEAVISLFR---HLEMLG-ISHDLYSFTTLIDCFCRCARLSL 132
Query: 85 ALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILH 144
AL M G + V + SL+N H +A+ L ++++ G EPN +N I+
Sbjct: 133 ALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIID 192
Query: 145 ACVEACQYDRAF-----------------------RFFHSWKGNKMLGSFGEGYNSNLKQ 181
+ E Q + A R FHS + +
Sbjct: 193 SLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISP 252
Query: 182 GSIHNATTVPNGFSNSQILSFTERF------PFTPTTSTYNTLLKA-CGSDYY-HAKALI 233
I + + Q+L +++ P TYN+L+ C AK ++
Sbjct: 253 DVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVL 312
Query: 234 NEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVES 293
N + + G PN +T++ LI+ + V+ ++IL M G+ D Y T + ++
Sbjct: 313 NVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQA 372
Query: 294 KNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYV 350
F A + M SC +HP+ T+N LL +G ++ + L +D+QK+ V
Sbjct: 373 GKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHG---KIGKALVRLEDLQKSKTV 426
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 105/233 (45%), Gaps = 22/233 (9%)
Query: 113 HAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFG 172
H+ A+ LF +M + P+ F+ +L A + +Y+ F + MLG
Sbjct: 56 HSIKFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLE---MLGI-- 110
Query: 173 EGYNSNLKQGSIHNATTVPNGFSNSQILSFT-------ERFPFTPTTSTYNTLLKA-CGS 224
+++ TT+ + F LS + F P+ T+ +L+ C
Sbjct: 111 --------SHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHV 162
Query: 225 D-YYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAY 283
+ +Y A +L++++ +G PN + ++ +ID V A+++LK M GI+PDV+ Y
Sbjct: 163 NRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTY 222
Query: 284 TTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQ 336
+ I S + + + +M I P+ +T++ L+ K G +LE ++
Sbjct: 223 NSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKK 275
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 92/380 (24%), Positives = 161/380 (42%), Gaps = 54/380 (14%)
Query: 7 DLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDV 66
D LN+ M+ +KPD+ Y+ ++ C G AQ ++ E+ LE + +V
Sbjct: 276 DTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEM--LEK--GIAPNV 331
Query: 67 FTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEE 126
FTY+ +I F W A ++ DM +N + + +++LI+A G + +A +L +E
Sbjct: 332 FTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDE 391
Query: 127 MLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHN 186
ML P+T +N +++ + ++D A F ++ +N+ +
Sbjct: 392 MLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVV-----TFNTIIDVYC--R 444
Query: 187 ATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKA-CGSDYYH-AKALINEMKTVGLSPN 244
A V G Q+L R T+TYNTL+ C D + A+ L EM + G+ P+
Sbjct: 445 AKRVDEGM---QLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPD 501
Query: 245 QITWSILIDICGGTENVEGAIEILK----------------------------------- 269
IT +IL+ E +E A+E+ +
Sbjct: 502 TITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFC 561
Query: 270 SMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYG 329
S+ G++PDV Y I A L+ +MK P+ TYNTL++ K G
Sbjct: 562 SLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAG 621
Query: 330 SVLEVQQCLAIYQDMQKAGY 349
E+ + + + +M+ G+
Sbjct: 622 ---EIDKSIELISEMRSNGF 638
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 84/352 (23%), Positives = 150/352 (42%), Gaps = 41/352 (11%)
Query: 14 IYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGR-LKLDVFTYSTI 72
++ M +GL P + ++N L+ C+ GRV A + ++ VG+ L +DV TY TI
Sbjct: 213 LFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKM-----VGKGLHIDVVTYGTI 267
Query: 73 IKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGC 132
+ + AL + M + + V +S++I+ G A LF EML G
Sbjct: 268 VNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGI 327
Query: 133 EPNTQCFNIILHACVEACQYDRAFRFFHSW---KGNKMLGSFGEGYNSNLKQGSIHNATT 189
PN +N ++ ++ A R + N + +F ++++K+G + A
Sbjct: 328 APNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEK 387
Query: 190 V----------PNGFS-NSQILSFTERFPF-----------TPTTSTYNTLLKACGSDYY 227
+ P+ + NS I F + F +P T+NT++ Y
Sbjct: 388 LCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDV----YC 443
Query: 228 HAK------ALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVI 281
AK L+ E+ GL N T++ LI +N+ A ++ + M G+ PD I
Sbjct: 444 RAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTI 503
Query: 282 AYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLE 333
+ E++ ++AL L+E ++ +I + V YN ++ K V E
Sbjct: 504 TCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDE 555
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 136/313 (43%), Gaps = 45/313 (14%)
Query: 42 RVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNT 101
R D+A +Y++++ + R+ L++++++ +IK F D +L + G +
Sbjct: 121 RPDVAISLYRKME----IRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDV 176
Query: 102 VAWSSLINA-CAHAGLVE--------------QAIQLFEEMLLAGCEPNTQCFNIILHA- 145
V +++L++ C + E +A+ LF++M+ G P FN +++
Sbjct: 177 VTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGL 236
Query: 146 CVEACQYDRAFRFFHSWKGNKMLG--------SFGEGYNSNLKQGSIHNATTVPNGFSNS 197
C+E + A NKM+G ++G N K G +A
Sbjct: 237 CLEGRVLEAAALV------NKMVGKGLHIDVVTYGTIVNGMCKMGDTKSAL--------- 281
Query: 198 QILSFTERFPFTPTTSTYNTLLKACGSDYYHAKA--LINEMKTVGLSPNQITWSILIDIC 255
+LS E P Y+ ++ D +H+ A L +EM G++PN T++ +ID
Sbjct: 282 NLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGF 341
Query: 256 GGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNW 315
A +L+ M + I PDV+ + I V+ +A L +EM I P+
Sbjct: 342 CSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDT 401
Query: 316 VTYNTLLKARSKY 328
VTYN+++ K+
Sbjct: 402 VTYNSMIYGFCKH 414
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 109/271 (40%), Gaps = 32/271 (11%)
Query: 72 IIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAG 131
+I VF +A+ + M + LN +++ LI + ++ F ++ G
Sbjct: 112 VIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLG 171
Query: 132 CEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVP 191
+P+ FN +LH C DR ++ L FG V
Sbjct: 172 FQPDVVTFNTLLHG---LCLEDRI---------SEALALFG---------------YMVE 204
Query: 192 NGFSNSQILSFTE--RFPFTPTTSTYNTLLKAC--GSDYYHAKALINEMKTVGLSPNQIT 247
GF + L F + TP T+NTL+ A AL+N+M GL + +T
Sbjct: 205 TGFLEAVAL-FDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVT 263
Query: 248 WSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMK 307
+ +++ + + A+ +L M + IKPDV+ Y+ I + + A L+ EM
Sbjct: 264 YGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEML 323
Query: 308 SCEIHPNWVTYNTLLKARSKYGSVLEVQQCL 338
I PN TYN ++ +G + Q+ L
Sbjct: 324 EKGIAPNVFTYNCMIDGFCSFGRWSDAQRLL 354
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/158 (20%), Positives = 71/158 (44%), Gaps = 4/158 (2%)
Query: 13 NIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTI 72
+++Q M + G+ PD + NILL C +++ A ++++ ++ + ++ LD Y+ I
Sbjct: 488 DLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQ----MSKIDLDTVAYNII 543
Query: 73 IKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGC 132
I A + + GV + ++ +I+ + A LF +M G
Sbjct: 544 IHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGH 603
Query: 133 EPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGS 170
EP+ +N ++ C++A + D++ + N G
Sbjct: 604 EPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGD 641
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 138/311 (44%), Gaps = 48/311 (15%)
Query: 14 IYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTII 73
++ M++ GLKP +YNIL+ A + D+ + + L+ +E +G L+ +V +Y+ +I
Sbjct: 401 LFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETL---LREMEDLG-LEPNVKSYTCLI 456
Query: 74 KVFADAK-LWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGC 132
+ K + MA M+ G+ ++ ++++LI+A + +G E+A FEEM G
Sbjct: 457 SAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGI 516
Query: 133 EPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPN 192
+P+ + + +L A F S K++
Sbjct: 517 KPSVETYTSVLDA------------FRRSGDTGKLM------------------------ 540
Query: 193 GFSNSQILSFTERFPFTPTTSTYNTLLKACGSD--YYHAKALINEMKTVGLSPNQITWSI 250
+I R T TYNTLL Y A+ +++E +GL P+ +T+++
Sbjct: 541 -----EIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNM 595
Query: 251 LIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCE 310
L++ ++LK M +KPD I Y+T I V ++FK+A ++ M
Sbjct: 596 LMNAYARGGQDAKLPQLLKEMAALNLKPDSITYSTMIYAFVRVRDFKRAFFYHKMMVKSG 655
Query: 311 IHPNWVTYNTL 321
P+ +Y L
Sbjct: 656 QVPDPRSYEKL 666
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/338 (23%), Positives = 141/338 (41%), Gaps = 53/338 (15%)
Query: 13 NIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVG-RLKLDVFTYST 71
+Y+ M + + PD + IL+ AGR A+++++ + + G + DVF
Sbjct: 294 EVYEAMDKINVYPDNVTCAILITTLRKAGRS--AKEVWEIFEKMSEKGVKWSQDVF--GG 349
Query: 72 IIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAG 131
++K F D L + AL ++ +M G+ NT+ +++L++A + +E+ LF EM G
Sbjct: 350 LVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKG 409
Query: 132 CEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVP 191
+P+ +NI++ A Q D
Sbjct: 410 LKPSAATYNILMDAYARRMQPDIV------------------------------------ 433
Query: 192 NGFSNSQILSFTERFPFTPTTSTYNTLLKACG-----SDYYHAKALINEMKTVGLSPNQI 246
+L E P +Y L+ A G SD A A + MK VGL P+
Sbjct: 434 -----ETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDM-AADAFLR-MKKVGLKPSSH 486
Query: 247 TWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEM 306
+++ LI + E A + M GIKP V YT+ + S + + + +++ M
Sbjct: 487 SYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLM 546
Query: 307 KSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDM 344
+I +TYNTLL +K G +E + ++ + M
Sbjct: 547 LREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKM 584
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 150/319 (47%), Gaps = 34/319 (10%)
Query: 14 IYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTII 73
I+ + LGL+ +++ N L+ G+++L++ ++ +K ++ ++++I+
Sbjct: 111 IHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMK--------DRNLSSWNSIL 162
Query: 74 KVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCE 133
+ A+ + +M G+ + V W+SL++ A GL + AI + + M +AG +
Sbjct: 163 SSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLK 222
Query: 134 PNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYN-SNLKQGSIHNATTVPN 192
P+T + +L A E G+ LG GY N ++ TT+ +
Sbjct: 223 PSTSSISSLLQAVAEP--------------GHLKLGKAIHGYILRNQLWYDVYVETTLID 268
Query: 193 GFSNSQILSFTERFPF----TPTTSTYNTLLKACGSDYY----HAKALINEMKTVGLSPN 244
+ + L + R F +N+L+ G Y A+AL+ M+ G+ P+
Sbjct: 269 MYIKTGYLPYA-RMVFDMMDAKNIVAWNSLVS--GLSYACLLKDAEALMIRMEKEGIKPD 325
Query: 245 QITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYE 304
ITW+ L E A++++ M + G+ P+V+++T C ++ NF+ AL ++
Sbjct: 326 AITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFI 385
Query: 305 EMKSCEIHPNWVTYNTLLK 323
+M+ + PN T +TLLK
Sbjct: 386 KMQEEGVGPNAATMSTLLK 404
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 80/373 (21%), Positives = 151/373 (40%), Gaps = 71/373 (19%)
Query: 14 IYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTII 73
+ + MQ GLKP +S + LL+A G + L + ++ + +L DV+ +T+I
Sbjct: 212 VLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILR----NQLWYDVYVETTLI 267
Query: 74 KVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCE 133
++ A ++ DM A N VAW+SL++ ++A L++ A L M G +
Sbjct: 268 DMYIKTGYLPYA-RMVFDMMDAK---NIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIK 323
Query: 134 PNTQCFNIILHACVEACQYDRAFRFFHSWKGNKM---LGSFGEGYNSNLKQGSIHNATTV 190
P+ +N + + ++A K + + S+ ++ K G+ NA V
Sbjct: 324 PDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKV 383
Query: 191 PNGFSNSQILSFTERFPFTPTTSTYNTLLK--ACGSDYYHAKALINEMKTVGLSPNQITW 248
+ E P +T +TLLK C S + K + L +
Sbjct: 384 --------FIKMQEE-GVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVA 434
Query: 249 SILIDICGGTENVEGAIEIL-----KSMG--------------------------DAGIK 277
+ L+D+ G + +++ AIEI KS+ +AG++
Sbjct: 435 TALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGME 494
Query: 278 PDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQC 337
PD I +T+ + VC S ++ ++ M RS+YG + ++ C
Sbjct: 495 PDAITFTSVLSVCKNSGLVQEGWKYFDLM------------------RSRYGIIPTIEHC 536
Query: 338 LAIYQDMQKAGYV 350
+ + ++GY+
Sbjct: 537 SCMVDLLGRSGYL 549
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 94/207 (45%), Gaps = 26/207 (12%)
Query: 100 NTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFF 159
+ +AW+ ++ +G E+A++LF EM +G + ++ + ++ C F
Sbjct: 53 DDLAWNEIVMVNLRSGNWEKAVELFREMQFSG----AKAYDSTMVKLLQVCSNKEGFA-- 106
Query: 160 HSWKGNKMLG-SFGEGYNSNLKQGSIHNATTV---PNG---FSNSQILSFTERFPFTPTT 212
+G ++ G G SN+ S+ N+ V NG S S +R
Sbjct: 107 ---EGRQIHGYVLRLGLESNV---SMCNSLIVMYSRNGKLELSRKVFNSMKDR-----NL 155
Query: 213 STYNTLLKACGSDYY--HAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKS 270
S++N++L + Y A L++EM+ GL P+ +TW+ L+ + AI +LK
Sbjct: 156 SSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKR 215
Query: 271 MGDAGIKPDVIAYTTAIKVCVESKNFK 297
M AG+KP + ++ ++ E + K
Sbjct: 216 MQIAGLKPSTSSISSLLQAVAEPGHLK 242
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/335 (23%), Positives = 143/335 (42%), Gaps = 61/335 (18%)
Query: 12 LNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYST 71
L+++ M+ GL PD+ +Y+I++ C G+ D+A +Y E+ R+ + T+
Sbjct: 383 LSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEM----CDKRILPNSRTHGA 438
Query: 72 IIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAG 131
++ + A + + S+G L+ V ++ +I+ A +G +E+A++LF+ ++ G
Sbjct: 439 LLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETG 498
Query: 132 CEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVP 191
P+ FN +++ GY K +I A
Sbjct: 499 ITPSVATFNSLIY-----------------------------GY---CKTQNIAEA---- 522
Query: 192 NGFSNSQILSFTERFPFTPTTSTYNTLLKA---CGSDYYHAKALINEMKTVGLSPNQITW 248
+IL + + P+ +Y TL+ A CG + L EMK G+ P +T+
Sbjct: 523 -----RKILDVIKLYGLAPSVVSYTTLMDAYANCG-NTKSIDELRREMKAEGIPPTNVTY 576
Query: 249 SILID-ICGGTEN-----------VEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNF 296
S++ +C G ++ E + L+ M GI PD I Y T I+ K+
Sbjct: 577 SVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHL 636
Query: 297 KQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSV 331
A E MKS + + TYN L+ + YG +
Sbjct: 637 SGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYI 671
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 79/359 (22%), Positives = 162/359 (45%), Gaps = 54/359 (15%)
Query: 12 LNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYST 71
L + M G++PD +YNIL K + G + A ++ +++ L DV TY+
Sbjct: 277 LELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLD----KGLSPDVITYTI 332
Query: 72 IIKVFADAKLWQMALKVKHDMRSAGVNLNT-VAWSSLINACAHAGLVEQAIQLFEEMLLA 130
++ M L + DM S G LN+ + S +++ G +++A+ LF +M
Sbjct: 333 LLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKAD 392
Query: 131 GCEPNTQCFNIILHACVEACQYDRAFRFFHSW-----------KGNKMLGSFGEG----- 174
G P+ ++I++H + ++D A + G +LG +G
Sbjct: 393 GLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEA 452
Query: 175 ---YNSNLKQGSIHNAT---TVPNGFSNS-------QILSFTERFPFTPTTSTYNTLLKA 221
+S + G + V +G++ S ++ TP+ +T+N+L+
Sbjct: 453 RSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYG 512
Query: 222 -CGS-DYYHAKALINEMKTVGLSPNQITWSILIDI---CGGTENVEGAIEILKSMGDAGI 276
C + + A+ +++ +K GL+P+ ++++ L+D CG T++++ E+ + M GI
Sbjct: 513 YCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSID---ELRREMKAEGI 569
Query: 277 KPDVIAYTTAIK-VC-----------VESKNFKQALTLYEEMKSCEIHPNWVTYNTLLK 323
P + Y+ K +C + + F++ +M+S I P+ +TYNT+++
Sbjct: 570 PPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQ 628
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/338 (22%), Positives = 156/338 (46%), Gaps = 32/338 (9%)
Query: 22 GLKPDMTSYNILLKACCVAGRV----DLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFA 77
GL P + S+NIL+ C+ G + +LA DM K +SV TY+ + K F
Sbjct: 252 GLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSV--------TYNILAKGFH 303
Query: 78 DAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNT- 136
+ A +V DM G++ + + ++ L+ G ++ + L ++ML G E N+
Sbjct: 304 LLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSI 363
Query: 137 -QCFNIILHACVEACQYDRAFRFFHSWKGNKM---LGSFGEGYNSNLKQGSIHNATTVPN 192
C +++L + + D A F+ K + + L ++ + K G A + +
Sbjct: 364 IPC-SVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYD 422
Query: 193 GFSNSQILSFTERFPFTPTTSTYNTLLKACGSD--YYHAKALINEMKTVGLSPNQITWSI 250
+ +IL P + T+ LL A++L++ + + G + + + ++I
Sbjct: 423 EMCDKRIL---------PNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNI 473
Query: 251 LIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCE 310
+ID + +E A+E+ K + + GI P V + + I +++N +A + + +K
Sbjct: 474 VIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYG 533
Query: 311 IHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAG 348
+ P+ V+Y TL+ A + G+ + + + ++M+ G
Sbjct: 534 LAPSVVSYTTLMDAYANCGNTKSIDE---LRREMKAEG 568
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/257 (20%), Positives = 105/257 (40%), Gaps = 32/257 (12%)
Query: 102 VAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHS 161
+ W L+ + +V+ ++ + ++M +TQ +N +L +H
Sbjct: 125 LVWDMLLFLSSRLRMVDDSLYILKKMKDQNLNVSTQSYNSVL---------------YHF 169
Query: 162 WKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFT-------PTTST 214
+ +KM + E +K + H +TV +G Q L F T P+ +
Sbjct: 170 RETDKMWDVYKE-----IKDKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVS 224
Query: 215 YNTLLKA-CGSDYYH-AKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMG 272
+N+++ C + AK+ + GL P+ + +ILI+ ++ A+E+ M
Sbjct: 225 FNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMN 284
Query: 273 DAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVL 332
G++PD + Y K A + +M + P+ +TY LL + + G+
Sbjct: 285 KHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGN-- 342
Query: 333 EVQQCLAIYQDMQKAGY 349
+ L + +DM G+
Sbjct: 343 -IDMGLVLLKDMLSRGF 358
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/335 (23%), Positives = 143/335 (42%), Gaps = 61/335 (18%)
Query: 12 LNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYST 71
L+++ M+ GL PD+ +Y+I++ C G+ D+A +Y E+ R+ + T+
Sbjct: 383 LSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEM----CDKRILPNSRTHGA 438
Query: 72 IIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAG 131
++ + A + + S+G L+ V ++ +I+ A +G +E+A++LF+ ++ G
Sbjct: 439 LLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETG 498
Query: 132 CEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVP 191
P+ FN +++ GY K +I A
Sbjct: 499 ITPSVATFNSLIY-----------------------------GY---CKTQNIAEA---- 522
Query: 192 NGFSNSQILSFTERFPFTPTTSTYNTLLKA---CGSDYYHAKALINEMKTVGLSPNQITW 248
+IL + + P+ +Y TL+ A CG + L EMK G+ P +T+
Sbjct: 523 -----RKILDVIKLYGLAPSVVSYTTLMDAYANCG-NTKSIDELRREMKAEGIPPTNVTY 576
Query: 249 SILID-ICGGTEN-----------VEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNF 296
S++ +C G ++ E + L+ M GI PD I Y T I+ K+
Sbjct: 577 SVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHL 636
Query: 297 KQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSV 331
A E MKS + + TYN L+ + YG +
Sbjct: 637 SGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYI 671
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 78/353 (22%), Positives = 160/353 (45%), Gaps = 54/353 (15%)
Query: 18 MQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFA 77
M G++PD +YNIL K + G + A ++ +++ L DV TY+ ++
Sbjct: 283 MNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLD----KGLSPDVITYTILLCGQC 338
Query: 78 DAKLWQMALKVKHDMRSAGVNLNT-VAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNT 136
M L + DM S G LN+ + S +++ G +++A+ LF +M G P+
Sbjct: 339 QLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDL 398
Query: 137 QCFNIILHACVEACQYDRAFRFFHSW-----------KGNKMLGSFGEG--------YNS 177
++I++H + ++D A + G +LG +G +S
Sbjct: 399 VAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDS 458
Query: 178 NLKQGSIHNAT---TVPNGFSNS-------QILSFTERFPFTPTTSTYNTLLKA-CGS-D 225
+ G + V +G++ S ++ TP+ +T+N+L+ C + +
Sbjct: 459 LISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQN 518
Query: 226 YYHAKALINEMKTVGLSPNQITWSILIDI---CGGTENVEGAIEILKSMGDAGIKPDVIA 282
A+ +++ +K GL+P+ ++++ L+D CG T++++ E+ + M GI P +
Sbjct: 519 IAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSID---ELRREMKAEGIPPTNVT 575
Query: 283 YTTAIK-VC-----------VESKNFKQALTLYEEMKSCEIHPNWVTYNTLLK 323
Y+ K +C + + F++ +M+S I P+ +TYNT+++
Sbjct: 576 YSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQ 628
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/338 (22%), Positives = 156/338 (46%), Gaps = 32/338 (9%)
Query: 22 GLKPDMTSYNILLKACCVAGRV----DLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFA 77
GL P + S+NIL+ C+ G + +LA DM K +SV TY+ + K F
Sbjct: 252 GLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSV--------TYNILAKGFH 303
Query: 78 DAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNT- 136
+ A +V DM G++ + + ++ L+ G ++ + L ++ML G E N+
Sbjct: 304 LLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSI 363
Query: 137 -QCFNIILHACVEACQYDRAFRFFHSWKGNKM---LGSFGEGYNSNLKQGSIHNATTVPN 192
C +++L + + D A F+ K + + L ++ + K G A + +
Sbjct: 364 IPC-SVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYD 422
Query: 193 GFSNSQILSFTERFPFTPTTSTYNTLLKACGSD--YYHAKALINEMKTVGLSPNQITWSI 250
+ +IL P + T+ LL A++L++ + + G + + + ++I
Sbjct: 423 EMCDKRIL---------PNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNI 473
Query: 251 LIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCE 310
+ID + +E A+E+ K + + GI P V + + I +++N +A + + +K
Sbjct: 474 VIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYG 533
Query: 311 IHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAG 348
+ P+ V+Y TL+ A + G+ + + + ++M+ G
Sbjct: 534 LAPSVVSYTTLMDAYANCGNTKSIDE---LRREMKAEG 568
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/257 (20%), Positives = 105/257 (40%), Gaps = 32/257 (12%)
Query: 102 VAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHS 161
+ W L+ + +V+ ++ + ++M +TQ +N +L +H
Sbjct: 125 LVWDMLLFLSSRLRMVDDSLYILKKMKDQNLNVSTQSYNSVL---------------YHF 169
Query: 162 WKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFT-------PTTST 214
+ +KM + E +K + H +TV +G Q L F T P+ +
Sbjct: 170 RETDKMWDVYKE-----IKDKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVS 224
Query: 215 YNTLLKA-CGSDYYH-AKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMG 272
+N+++ C + AK+ + GL P+ + +ILI+ ++ A+E+ M
Sbjct: 225 FNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMN 284
Query: 273 DAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVL 332
G++PD + Y K A + +M + P+ +TY LL + + G+
Sbjct: 285 KHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGN-- 342
Query: 333 EVQQCLAIYQDMQKAGY 349
+ L + +DM G+
Sbjct: 343 -IDMGLVLLKDMLSRGF 358
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 137/320 (42%), Gaps = 30/320 (9%)
Query: 13 NIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGR-LKLDVFTYST 71
++++ + + D YN+ A G+V+ A ++++E+ G+ + DV Y+T
Sbjct: 382 DLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREM-----TGKGIAPDVINYTT 436
Query: 72 IIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAG 131
+I A + +M G + V ++ L A GL ++A + + M G
Sbjct: 437 LIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRG 496
Query: 132 CEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVP 191
+P N+++ ++A + D+A F+ S L+ S N ++
Sbjct: 497 VKPTYVTHNMVIEGLIDAGELDKAEAFYES-----------------LEHKSRENDASMV 539
Query: 192 NGFSNSQILSFT-ERF---PFTPTTSTYNTLLKA-CGSDYYHAKA--LINEMKTVGLSPN 244
GF + L ERF F S Y TL + C Y +KA L++ M +G+ P
Sbjct: 540 KGFCAAGCLDHAFERFIRLEFPLPKSVYFTLFTSLCAEKDYISKAQDLLDRMWKLGVEPE 599
Query: 245 QITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYE 304
+ + LI NV A E + + I PD+ YT I KQA L+E
Sbjct: 600 KSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFE 659
Query: 305 EMKSCEIHPNWVTYNTLLKA 324
+MK ++ P+ VTY+ LL +
Sbjct: 660 DMKRRDVKPDVVTYSVLLNS 679
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/312 (21%), Positives = 126/312 (40%), Gaps = 26/312 (8%)
Query: 18 MQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFA 77
M LG++P+ + Y L+ A C V A++ ++ L ++ D+FTY+ +I +
Sbjct: 591 MWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEIL----VTKKIVPDLFTYTIMINTYC 646
Query: 78 DAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQ 137
+ A + DM+ V + V +S L+N+ + + + EM P+
Sbjct: 647 RLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNS-------DPELDMKREMEAFDVIPDVV 699
Query: 138 CFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNS 197
+ I+++ + + F K +++ Y LK N + F
Sbjct: 700 YYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVT-YTVLLKNKPERNLSREMKAFD-- 756
Query: 198 QILSFTERFPFTPTTSTYNTLLK-ACG-SDYYHAKALINEMKTVGLSPNQITWSILIDIC 255
P Y L+ C D AK + ++M G+ P+ ++ LI C
Sbjct: 757 ----------VKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACC 806
Query: 256 GGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNW 315
++ A I M ++G+KPDV+ YT I C + +A+ L +EM I P
Sbjct: 807 CKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIKPTK 866
Query: 316 VTYNTLLKARSK 327
+ + + A+ K
Sbjct: 867 ASLSAVHYAKLK 878
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 53/119 (44%)
Query: 225 DYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYT 284
++ A L E + +S +++ +++ D G VE AIE+ + M GI PDVI YT
Sbjct: 376 NFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYT 435
Query: 285 TAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQD 343
T I C A L EM P+ V YN L + G E + L + ++
Sbjct: 436 TLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMEN 494
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 79/358 (22%), Positives = 158/358 (44%), Gaps = 34/358 (9%)
Query: 3 VNSRDLTYTLNIYQIM-QNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGR 61
V SR + + ++++M + L P++ + + LL LA +++ ++ SVG
Sbjct: 167 VRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMV---SVG- 222
Query: 62 LKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAI 121
++ DV+ Y+ +I+ + K A ++ M + G ++N V ++ LI+ V +A+
Sbjct: 223 IRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAV 282
Query: 122 QLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSW------KGNKMLGSFGEGY 175
+ +++ +P+ + +++ + +++ + S EG
Sbjct: 283 GIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGL 342
Query: 176 NSNLKQGSIHNATTVPNGFSNSQILSFTER---FPFTPTTSTYNTLLKAC--GSDYYHAK 230
K+G I A L+ +R F +P YN L+ + G ++ A+
Sbjct: 343 R---KRGKIEEA------------LNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAE 387
Query: 231 ALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVC 290
L + M +GL PN +T+SILID+ ++ A+ L M D G+K V Y + I
Sbjct: 388 LLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGH 447
Query: 291 VESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAG 348
+ + A EM + ++ P VTY +L+ Y S ++ + L +Y +M G
Sbjct: 448 CKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGG---YCSKGKINKALRLYHEMTGKG 502
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 142/330 (43%), Gaps = 12/330 (3%)
Query: 8 LTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVF 67
L L+ M + GLK + YN L+ C G + A+ E+ + +L+ V
Sbjct: 418 LDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMIN----KKLEPTVV 473
Query: 68 TYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEM 127
TY++++ + AL++ H+M G+ + +++L++ AGL+ A++LF EM
Sbjct: 474 TYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEM 533
Query: 128 LLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNA 187
+PN +N+++ E +AF F K + G ++ + IH
Sbjct: 534 AEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFL------KEMTEKGIVPDTYSYRPLIHGL 587
Query: 188 TTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKAL--INEMKTVGLSPNQ 245
+ + Y LL + +AL EM G+ +
Sbjct: 588 CLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDL 647
Query: 246 ITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEE 305
+ + +LID ++ + +LK M D G+KPD + YT+ I ++ +FK+A +++
Sbjct: 648 VCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDL 707
Query: 306 MKSCEIHPNWVTYNTLLKARSKYGSVLEVQ 335
M + PN VTY ++ K G V E +
Sbjct: 708 MINEGCVPNEVTYTAVINGLCKAGFVNEAE 737
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 131/329 (39%), Gaps = 34/329 (10%)
Query: 7 DLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDV 66
D++ + M G+ PD SY L+ C+ G+ A+ L G +L+
Sbjct: 557 DMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHK----GNCELNE 612
Query: 67 FTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEE 126
Y+ ++ F + AL V +M GV+L+ V + LI+ + L +E
Sbjct: 613 ICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKE 672
Query: 127 MLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHN 186
M G +P+ + ++ A + + AF ++ + +G + N
Sbjct: 673 MHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGI----------------WDLMINEGCVPN 716
Query: 187 ATT---VPNGFSNSQILSFTERF--PFTPTTSTYNTLLKACGSDYYHAKALINEMKTV-- 239
T V NG + ++ E P +S N + C D K ++ K V
Sbjct: 717 EVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDIL-TKGEVDMQKAVEL 775
Query: 240 ------GLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVES 293
GL N T+++LI +E A E++ M G+ PD I YTT I
Sbjct: 776 HNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRR 835
Query: 294 KNFKQALTLYEEMKSCEIHPNWVTYNTLL 322
+ K+A+ L+ M I P+ V YNTL+
Sbjct: 836 NDVKKAIELWNSMTEKGIRPDRVAYNTLI 864
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 75/343 (21%), Positives = 142/343 (41%), Gaps = 58/343 (16%)
Query: 12 LNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYST 71
LN+ + + + G+ P++ YN L+ + C + A+ ++ + + L+ + TYS
Sbjct: 352 LNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIG----LRPNDVTYSI 407
Query: 72 IIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAG 131
+I +F AL +M G+ L+ ++SLIN G + A EM+
Sbjct: 408 LIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKK 467
Query: 132 CEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVP 191
EP + ++ + ++A R +H G + SI+ TT+
Sbjct: 468 LEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGI-------------APSIYTFTTLL 514
Query: 192 NGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKALINEMKTVGLSPNQITWSIL 251
+G + ++ A L NEM + PN++T++++
Sbjct: 515 SGLFRAGLIR--------------------------DAVKLFNEMAEWNVKPNRVTYNVM 548
Query: 252 IDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIK-VCV-----ESKNFKQALTLYEE 305
I+ ++ A E LK M + GI PD +Y I +C+ E+K F L
Sbjct: 549 IEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGL----H 604
Query: 306 MKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAG 348
+CE+ N + Y LL + G ++++ L++ Q+M + G
Sbjct: 605 KGNCEL--NEICYTGLLHGFCREG---KLEEALSVCQEMVQRG 642
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 62/117 (52%), Gaps = 6/117 (5%)
Query: 22 GLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGR-LKLDVFTYSTIIKVFADAK 80
GL + +YN+L++ C GR++ A ++ + +G + D TY+T+I
Sbjct: 782 GLLANTATYNMLIRGFCRQGRIEEASELITRM-----IGDGVSPDCITYTTMINELCRRN 836
Query: 81 LWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQ 137
+ A+++ + M G+ + VA+++LI+ C AG + +A +L EML G PN +
Sbjct: 837 DVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNK 893
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 148/336 (44%), Gaps = 27/336 (8%)
Query: 18 MQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVF-TYSTIIKVF 76
M G +PD+ ++ L+ C GRV L+ L V R+ + Y TII
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRV---------LQALALVDRMVEEGHQPYGTIINGL 51
Query: 77 ADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNT 136
+ AL + M + + V ++++I+ G A LF EM G P+
Sbjct: 52 CKMGDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDV 111
Query: 137 QCFNIILHACVEACQYDRA---FRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNG 193
++ ++ + + ++ A R + N + +F N+ +K+G + A
Sbjct: 112 ITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEA------ 165
Query: 194 FSNSQILSFTERFPFTPTTSTYNTLLKA-CGSDYYH-AKALINEMKTVGLSPNQITWSIL 251
+I R PTT TYN+++ C D + AK +++ M + SP+ +T+S L
Sbjct: 166 ---EEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTL 222
Query: 252 IDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEI 311
I+ + V+ +EI M GI + + YTT I + + A L M S +
Sbjct: 223 INGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGV 282
Query: 312 HPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKA 347
PN++T+ ++L + S E+++ AI +D+QK+
Sbjct: 283 APNYITFQSML---ASLCSKKELRKAFAILEDLQKS 315
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 73/312 (23%), Positives = 128/312 (41%), Gaps = 55/312 (17%)
Query: 7 DLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDV 66
D LN+ M+ +K + YN ++ C G AQ+++ E+ H + + DV
Sbjct: 56 DTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEM-HDKGIFP---DV 111
Query: 67 FTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEE 126
TYS +I F + W A ++ DM +N + V +S+LINA G V +A +++ +
Sbjct: 112 ITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGD 171
Query: 127 MLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHN 186
ML G P T +N ++ C+ DR +ML S S
Sbjct: 172 MLRRGIFPTTITYNSMIDG---FCKQDRL------NDAKRMLDSMASKSCS--------- 213
Query: 187 ATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKALIN------EMKTVG 240
P T++TL+ Y AK + N EM G
Sbjct: 214 -----------------------PDVVTFSTLING----YCKAKRVDNGMEIFCEMHRRG 246
Query: 241 LSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQAL 300
+ N +T++ LI +++ A ++L M +G+ P+ I + + + K ++A
Sbjct: 247 IVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAF 306
Query: 301 TLYEEMKSCEIH 312
+ E+++ E H
Sbjct: 307 AILEDLQKSEGH 318
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 79/333 (23%), Positives = 149/333 (44%), Gaps = 16/333 (4%)
Query: 18 MQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFA 77
MQ G+ D+ SYN+L+ G+V A YK ++ ++ D+ T++ ++
Sbjct: 530 MQERGMPWDVVSYNVLISGMLKFGKVG-ADWAYKGMRE----KGIEPDIATFNIMMNSQR 584
Query: 78 DAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQ 137
+ LK+ M+S G+ + ++ + ++ G +E+AI + +M+L PN
Sbjct: 585 KQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLT 644
Query: 138 CFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNS 197
+ I L + ++ RA F K ++ L S+G + + I + +
Sbjct: 645 TYRIFLDT---SSKHKRADAIF---KTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAA 698
Query: 198 QILSFTERFPFTPTTSTYNTLLKA--CGSDYYHAKALINEMKTVGLSPNQITWSILIDIC 255
++ E F P T T+N+L+ GS A + + M G+SPN T++ +I
Sbjct: 699 MVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGL 758
Query: 256 GGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNW 315
++ + L M G++PD Y I + N K ++T+Y EM + + P
Sbjct: 759 SDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKT 818
Query: 316 VTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAG 348
TYN L+ + G +L+ ++ L ++M K G
Sbjct: 819 STYNVLISEFANVGKMLQARELL---KEMGKRG 848
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 73/332 (21%), Positives = 140/332 (42%), Gaps = 22/332 (6%)
Query: 14 IYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTII 73
IY M G+ PD+ + N+L+ + C GR+ A + + + +D TY+T+I
Sbjct: 116 IYSKMIACGVSPDVFALNVLIHSFCKVGRLSFAISLLRNRV-------ISIDTVTYNTVI 168
Query: 74 KVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCE 133
+ L A + +M G+ +TV++++LI+ G +A L +E+ E
Sbjct: 169 SGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEI----SE 224
Query: 134 PNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNG 193
N I+L + + A+R + + +F N K G +
Sbjct: 225 LNLITHTILLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKV--------- 275
Query: 194 FSNSQILSFTERFPFTPTTSTYNTLLKAC--GSDYYHAKALINEMKTVGLSPNQITWSIL 251
+L E P TY TL+ + + Y HA AL ++M G+ + + +++L
Sbjct: 276 LEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVL 335
Query: 252 IDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEI 311
+D ++ A + K + + P+V+ YT + ++ + A + +M +
Sbjct: 336 MDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSV 395
Query: 312 HPNWVTYNTLLKARSKYGSVLEVQQCLAIYQD 343
PN VTY++++ K G + E L +D
Sbjct: 396 IPNVVTYSSMINGYVKKGMLEEAVSLLRKMED 427
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/314 (22%), Positives = 138/314 (43%), Gaps = 46/314 (14%)
Query: 61 RLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQA 120
+ ++ V + T+ +++ + A + M + GV ++ W+SLI+ GLV
Sbjct: 53 KTRVYVSLFHTLFRLYLSCERLYGAARTLSAMCTFGVVPDSRLWNSLIHQFNVNGLVHDQ 112
Query: 121 IQL-FEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNL 179
+ L + +M+ G P+ N+++H+ C+ R F S N+++ YN+ +
Sbjct: 113 VSLIYSKMIACGVSPDVFALNVLIHSF---CKVGR-LSFAISLLRNRVISIDTVTYNTVI 168
Query: 180 KQGSIHNATTVPNGFSNS--QILSFTERFPFTPTTSTYNTLLKA-CG-SDYYHAKALINE 235
H G ++ Q LS + P T +YNTL+ C ++ AKAL++E
Sbjct: 169 SGLCEH-------GLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDE 221
Query: 236 MKTV----------------------------GLSPNQITWSILID-ICGGTENVEGAIE 266
+ + G P+ +T+S +I+ +C G + +EG +
Sbjct: 222 ISELNLITHTILLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGL- 280
Query: 267 ILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARS 326
+L+ M + + P+ + YTT + ++ ++ AL LY +M I + V Y L+
Sbjct: 281 LLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLF 340
Query: 327 KYGSVLEVQQCLAI 340
K G + E ++ +
Sbjct: 341 KAGDLREAEKTFKM 354
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/319 (21%), Positives = 128/319 (40%), Gaps = 49/319 (15%)
Query: 12 LNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYST 71
L ++ M++ G+KP + S NI++ C G+++ A + ++ +E + ++ TY
Sbjct: 593 LKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLME----IHPNLTTYRI 648
Query: 72 IIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAG 131
+ + K K + S G+ L+ +++LI G+ ++A + +M G
Sbjct: 649 FLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARG 708
Query: 132 CEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVP 191
P+T FN ++H +A Y+ ++ G
Sbjct: 709 FIPDTVTFNSLMHGYFVGSHVRKAL----------------STYSVMMEAG--------- 743
Query: 192 NGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKAL---INEMKTVGLSPNQITW 248
+P +TYNT+++ SD K + ++EMK+ G+ P+ T+
Sbjct: 744 ----------------ISPNVATYNTIIRGL-SDAGLIKEVDKWLSEMKSRGMRPDDFTY 786
Query: 249 SILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKS 308
+ LI N++G++ I M G+ P Y I QA L +EM
Sbjct: 787 NALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGK 846
Query: 309 CEIHPNWVTYNTLLKARSK 327
+ PN TY T++ K
Sbjct: 847 RGVSPNTSTYCTMISGLCK 865
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 87/411 (21%), Positives = 170/411 (41%), Gaps = 78/411 (18%)
Query: 8 LTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELK------------- 54
L +++ + M++ + P+ +Y ++ AG+ ++A ++ KE++
Sbjct: 415 LEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDA 474
Query: 55 ---HLESVGRLK---------------LDVFTYSTIIKVFADAKLWQMALKVKHDMRSAG 96
HL+ +GR+K LD Y+++I VF + AL +M+ G
Sbjct: 475 LVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERG 534
Query: 97 VNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAF 156
+ + V+++ LI+ G V A ++ M G EP+ FNI++++ + +
Sbjct: 535 MPWDVVSYNVLISGMLKFGKV-GADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGIL 593
Query: 157 RFFHSWKG----------NKMLGSFGEGYNSNLKQG----------SIHNATTVPNGF-- 194
+ + K N ++G E N +++ IH T F
Sbjct: 594 KLWDKMKSCGIKPSLMSCNIVVGMLCE--NGKMEEAIHILNQMMLMEIHPNLTTYRIFLD 651
Query: 195 -------------SNSQILSFTERFPFTPTTSTYNTLLKA-CGSDYYHAKALI-NEMKTV 239
++ +LS+ + + YNTL+ C A++ +M+
Sbjct: 652 TSSKHKRADAIFKTHETLLSYGIKL----SRQVYNTLIATLCKLGMTKKAAMVMGDMEAR 707
Query: 240 GLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQA 299
G P+ +T++ L+ +V A+ M +AGI P+V Y T I+ ++ K+
Sbjct: 708 GFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEV 767
Query: 300 LTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYV 350
EMKS + P+ TYN L+ ++K G+ ++ + IY +M G V
Sbjct: 768 DKWLSEMKSRGMRPDDFTYNALISGQAKIGN---MKGSMTIYCEMIADGLV 815
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 68/330 (20%), Positives = 139/330 (42%), Gaps = 34/330 (10%)
Query: 15 YQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIK 74
Y+ M G PD+ +++ ++ C G+V + +E++ + + + TY+T++
Sbjct: 247 YRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMS----VYPNHVTYTTLVD 302
Query: 75 VFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEP 134
A +++ AL + M G+ ++ V ++ L++ AG + +A + F+ +L P
Sbjct: 303 SLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVP 362
Query: 135 NTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLG---SFGEGYNSNLKQGSIHNATT-- 189
N + ++ +A A ++ ++ N +K+G + A +
Sbjct: 363 NVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLL 422
Query: 190 --------VPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKALINEMKTVGL 241
VPNGF+ ++ + L KA + A L EM+ +G+
Sbjct: 423 RKMEDQNVVPNGFTYGTVI---------------DGLFKAGKEEM--AIELSKEMRLIGV 465
Query: 242 SPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALT 301
N L++ ++ ++K M G+ D I YT+ I V + + + AL
Sbjct: 466 EENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALA 525
Query: 302 LYEEMKSCEIHPNWVTYNTLLKARSKYGSV 331
EEM+ + + V+YN L+ K+G V
Sbjct: 526 WAEEMQERGMPWDVVSYNVLISGMLKFGKV 555
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 76/143 (53%), Gaps = 8/143 (5%)
Query: 12 LNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYST 71
L+ Y +M G+ P++ +YN +++ AG L +++ K L ++S G ++ D FTY+
Sbjct: 733 LSTYSVMMEAGISPNVATYNTIIRGLSDAG---LIKEVDKWLSEMKSRG-MRPDDFTYNA 788
Query: 72 IIKVFADAKLWQM--ALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLL 129
+I AK+ M ++ + +M + G+ T ++ LI+ A+ G + QA +L +EM
Sbjct: 789 LIS--GQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGK 846
Query: 130 AGCEPNTQCFNIILHACVEACQY 152
G PNT + ++ + C +
Sbjct: 847 RGVSPNTSTYCTMISGLCKLCTH 869
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 135/299 (45%), Gaps = 47/299 (15%)
Query: 29 SYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKV 88
+YN ++ DL ++ E+ E + LD T S +++ A + + A+
Sbjct: 168 TYNAMVDVLGKCRNFDLMWELVNEMNKNEESKLVTLD--TMSKVMRRLAKSGKYNKAVDA 225
Query: 89 KHDM-RSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACV 147
+M +S GV +T+A +SL++A +E A ++F + L +P+ + FNI++H
Sbjct: 226 FLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLK-LFDTIKPDARTFNILIHGFC 284
Query: 148 EACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFP 207
+A ++D A ++ TE
Sbjct: 285 KARKFDDARAMM--------------------------------------DLMKVTE--- 303
Query: 208 FTPTTSTYNTLLKA-CGS-DYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAI 265
FTP TY + ++A C D+ ++ EM+ G +PN +T++I++ G ++ V A+
Sbjct: 304 FTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEAL 363
Query: 266 EILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKA 324
+ + M + G PD Y++ I + ++ FK A ++E+M + + + + YNT++ A
Sbjct: 364 GVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISA 422
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/295 (22%), Positives = 125/295 (42%), Gaps = 56/295 (18%)
Query: 68 TYSTIIKVFADAK----LWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQL 123
TY+ ++ V + +W++ ++ + S V L+T+ S ++ A +G +A+
Sbjct: 168 TYNAMVDVLGKCRNFDLMWELVNEMNKNEESKLVTLDTM--SKVMRRLAKSGKYNKAVDA 225
Query: 124 FEEMLLA-GCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQG 182
F EM + G + +T N ++ A V K+
Sbjct: 226 FLEMEKSYGVKTDTIAMNSLMDALV--------------------------------KEN 253
Query: 183 SIHNATTVPNGFSNSQILSFTERFP-FTPTTSTYNTLLKA-CGSDYYH-AKALINEMKTV 239
SI +A V F + F P T+N L+ C + + A+A+++ MK
Sbjct: 254 SIEHAHEV-----------FLKLFDTIKPDARTFNILIHGFCKARKFDDARAMMDLMKVT 302
Query: 240 GLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQA 299
+P+ +T++ ++ + E+L+ M + G P+V+ YT + +SK +A
Sbjct: 303 EFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEA 362
Query: 300 LTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYVRLCL 354
L +YE+MK P+ Y++L+ SK G + + I++DM G R L
Sbjct: 363 LGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAE---IFEDMTNQGVRRDVL 414
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 71/139 (51%), Gaps = 4/139 (2%)
Query: 23 LKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLW 82
+KPD ++NIL+ C A + D A+ M +K V DV TY++ ++ + +
Sbjct: 269 IKPDARTFNILIHGFCKARKFDDARAMMDLMK----VTEFTPDVVTYTSFVEAYCKEGDF 324
Query: 83 QMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNII 142
+ ++ +MR G N N V ++ ++++ + V +A+ ++E+M GC P+ + ++ +
Sbjct: 325 RRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSL 384
Query: 143 LHACVEACQYDRAFRFFHS 161
+H + ++ A F
Sbjct: 385 IHILSKTGRFKDAAEIFED 403
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 70/150 (46%), Gaps = 5/150 (3%)
Query: 16 QIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKV 75
++ ++ G+K D + N L+ A ++ A +++ LK +++ K D T++ +I
Sbjct: 228 EMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVF--LKLFDTI---KPDARTFNILIHG 282
Query: 76 FADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPN 135
F A+ + A + M+ + V ++S + A G + ++ EEM GC PN
Sbjct: 283 FCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPN 342
Query: 136 TQCFNIILHACVEACQYDRAFRFFHSWKGN 165
+ I++H+ ++ Q A + K +
Sbjct: 343 VVTYTIVMHSLGKSKQVAEALGVYEKMKED 372
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 83/326 (25%), Positives = 136/326 (41%), Gaps = 55/326 (16%)
Query: 69 YSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEML 128
Y ++K+FA+ ++ ++ +M G ++ LI C AGL ++ F +
Sbjct: 155 YHLLMKIFAECGEYKAMCRLIDEMIKDGYPTTACTFNLLICTCGEAGLARDVVEQFIKSK 214
Query: 129 LAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNAT 188
P +N ILH+ + QY W +ML +G+ ++ +I
Sbjct: 215 TFNYRPYKHSYNAILHSLLGVKQYK-----LIDWVYEQML---EDGFTPDVLTYNIVMFA 266
Query: 189 TVPNGFSNS--QILSFTERFPFTPTTSTYNTLLK--ACGSDYYHAKALINEMKTVGLSPN 244
G ++ ++L + F+P TYN LL A G+ A L+N M+ VG+ P
Sbjct: 267 NFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPG 326
Query: 245 QITWSILID-------------------------------------ICGGTENVEGAIEI 267
I ++ LID I GG +E A E+
Sbjct: 327 VIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGG--ELEKAEEM 384
Query: 268 LKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSK 327
K M + G P+V Y + I+ + FK+A L +EM+S +PN+V Y+TL+
Sbjct: 385 FKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKN 444
Query: 328 YGSVLEVQQCLAIYQDM-QKAGYVRL 352
G VLE + + +DM +K YV L
Sbjct: 445 AGKVLEAHE---VVKDMVEKGHYVHL 467
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 114/264 (43%), Gaps = 47/264 (17%)
Query: 14 IYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTII 73
+Y+ M G PD+ +YNI++ A G+ D +Y+ L + G D++TY+ ++
Sbjct: 244 VYEQMLEDGFTPDVLTYNIVMFANFRLGKTD---RLYRLLDEMVKDG-FSPDLYTYNILL 299
Query: 74 KVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCE 133
A AL + + MR GV + +++LI+ + AG +E +E + GC
Sbjct: 300 HHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCT 359
Query: 134 PNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNG 193
P+ C+ +++ + + ++A F K + G+ +PN
Sbjct: 360 PDVVCYTVMITGYISGGELEKAEEMF------KEMTEKGQ----------------LPNV 397
Query: 194 FSNSQILSFTERFPFTPTTSTYNTLLKA--CGSDYYHAKALINEMKTVGLSPNQITWSIL 251
F TYN++++ + A AL+ EM++ G +PN + +S L
Sbjct: 398 F-------------------TYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTL 438
Query: 252 IDICGGTENVEGAIEILKSMGDAG 275
++ V A E++K M + G
Sbjct: 439 VNNLKNAGKVLEAHEVVKDMVEKG 462
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/352 (23%), Positives = 154/352 (43%), Gaps = 20/352 (5%)
Query: 5 SRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKL 64
S +L + I++ M+ G KP +++N L+K G+++ + + + E L+
Sbjct: 402 SGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDE---MLQP 458
Query: 65 DVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQL- 123
+ T + +++ + + + + A + + M+S GV + V +++L A A G A +
Sbjct: 459 NDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMI 518
Query: 124 FEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGS 183
ML +PN + I++ E + + A RFF+ K G N +
Sbjct: 519 IPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMK------ELGVHPNLFVFNSL 572
Query: 184 IHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGS--DYYHAKALINEMKTVGL 241
I + + +++ E F P T++TL+ A S D + + +M G+
Sbjct: 573 IKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGI 632
Query: 242 SPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALT 301
P+ +SIL E A +IL M G++P+V+ YT I + K+A+
Sbjct: 633 DPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQ 692
Query: 302 LYEEMKSCEI---HPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYV 350
+Y++M C I PN TY TL+ +G + + + +DM+ V
Sbjct: 693 VYKKM--CGIVGLSPNLTTYETLIWG---FGEAKQPWKAEELLKDMEGKNVV 739
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 72/326 (22%), Positives = 147/326 (45%), Gaps = 15/326 (4%)
Query: 26 DMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMA 85
D+ S L+ GR A ++ L +E + L TY+T++ K +
Sbjct: 318 DVRSRTKLMNGLIERGRPQEAHSIFNTL--IEEGHKPSL--ITYTTLVTALTRQKHFHSL 373
Query: 86 LKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHA 145
L + + G+ +T+ ++++INA + +G ++QA+++FE+M +GC+P FN ++
Sbjct: 374 LSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKG 433
Query: 146 CVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTER 205
+ + + + R ++ML N+ + N + ++ I+ +
Sbjct: 434 YGKIGKLEESSRLLDMMLRDEMLQP--NDRTCNILVQAWCNQRKIEEAWN---IVYKMQS 488
Query: 206 FPFTPTTSTYNTLLKA---CGSDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVE 262
+ P T+NTL KA GS +I M + PN T +++ +E
Sbjct: 489 YGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKME 548
Query: 263 GAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLL 322
A+ M + G+ P++ + + IK + + + + M+ + P+ VT++TL+
Sbjct: 549 EALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLM 608
Query: 323 KARSKYGSVLEVQQCLAIYQDMQKAG 348
A + SV ++++C IY DM + G
Sbjct: 609 NA---WSSVGDMKRCEEIYTDMLEGG 631
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 121/289 (41%), Gaps = 34/289 (11%)
Query: 4 NSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDM-YKELKHLESVGRL 62
N R + NI MQ+ G+KPD+ ++N L KA G A+DM + H ++
Sbjct: 472 NQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLH----NKV 527
Query: 63 KLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQ 122
K +V T TI+ + + + AL+ + M+ GV+ N ++SLI + ++ +
Sbjct: 528 KPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGE 587
Query: 123 LFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQG 182
+ + M G +P+ F+ +++A W + E Y L+ G
Sbjct: 588 VVDLMEEFGVKPDVVTFSTLMNA----------------WSSVGDMKRCEEIYTDMLEGG 631
Query: 183 ---SIHNATTVPNGFSNS-------QILSFTERFPFTPTTSTYNTLLKACGSDYYHAKAL 232
IH + + G++ + QIL+ +F P Y ++ S KA+
Sbjct: 632 IDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAM 691
Query: 233 INEMK---TVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKP 278
K VGLSPN T+ LI G + A E+LK M + P
Sbjct: 692 QVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNVVP 740
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 105/209 (50%), Gaps = 14/209 (6%)
Query: 1 MNVNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVG 60
+N+N D+ + +M+ G+KPD+ +++ L+ A G + +++Y ++ LE G
Sbjct: 577 LNIN--DMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDM--LE--G 630
Query: 61 RLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQA 120
+ D+ +S + K +A A + A ++ + MR GV N V ++ +I+ AG +++A
Sbjct: 631 GIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKA 690
Query: 121 IQLFEEML-LAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKG------NKMLGSFGE 173
+Q++++M + G PN + ++ EA Q +A +G K + +
Sbjct: 691 MQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNVVPTRKTMQLIAD 750
Query: 174 GYNSNLKQGSIHNATTVPNGFSNSQILSF 202
G+ S + + ++A T+ + FS S L+
Sbjct: 751 GWKS-IGVSNSNDANTLGSSFSTSSKLNI 778
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 84/342 (24%), Positives = 148/342 (43%), Gaps = 32/342 (9%)
Query: 16 QIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKV 75
++M+ G++P++ YN ++ A C +DLA+ ++ E+ LE L+ + FTYS +I
Sbjct: 473 KMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEM--LEK--GLEPNNFTYSILIDG 528
Query: 76 FADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPN 135
F K Q A V + M ++ N V ++++IN G +A ++ + L+ +
Sbjct: 529 FFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQN-LIKEKRYS 587
Query: 136 TQC--FNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNG 193
C +N I+ V+ D A + N K ++ T++ NG
Sbjct: 588 MSCTSYNSIIDGFVKVGDTDSAVETYREMSENG-------------KSPNVVTFTSLING 634
Query: 194 FSNSQILSFTERFPFTPTTSTYNTLLKACGS---------DYYHAKALINEMKTVGLSPN 244
F S + + L A G+ D A L +E+ +GL PN
Sbjct: 635 FCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPN 694
Query: 245 QITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYE 304
++ LI ++ AI++ K M + GI D+ YTT I ++ N A LY
Sbjct: 695 VSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYS 754
Query: 305 EMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQK 346
E+ I P+ + + L+ SK G L+ + L ++M+K
Sbjct: 755 ELLDLGIVPDEILHMVLVNGLSKKGQFLKASKML---EEMKK 793
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/389 (20%), Positives = 164/389 (42%), Gaps = 59/389 (15%)
Query: 2 NVNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGR 61
++ R + I++ + + G +PD +++ ++A C + +A D+ +E++ G+
Sbjct: 249 SLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMR-----GK 303
Query: 62 LKLDVF--TYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQ 119
L + TY+++I F + A++V +M G+ ++ +A +SL+N + +
Sbjct: 304 LGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGK 363
Query: 120 AIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGS--------- 170
A+ LF M G P+ F++++ + + ++A F+ K ++ S
Sbjct: 364 ALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQ 423
Query: 171 --------------FGEGYNSNL--------------KQGSIHNATTVPNGFSNSQILSF 202
F + + S + KQG + AT+ L
Sbjct: 424 GCLKAESPEAALEIFNDSFESWIAHGFMCNKIFLLFCKQGKVDAATS---------FLKM 474
Query: 203 TERFPFTPTTSTYNTLLKA-CG-SDYYHAKALINEMKTVGLSPNQITWSILIDICGGTEN 260
E+ P YN ++ A C + A+++ +EM GL PN T+SILID ++
Sbjct: 475 MEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKD 534
Query: 261 VEGAIEILKSMGDAGIKPDVIAYTTAIK-VCVESKNFKQALTLYEEMKSCEIHPNWVTYN 319
+ A +++ M + + + + Y T I +C + K L +K + +YN
Sbjct: 535 EQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYN 594
Query: 320 TLLKARSKYGSVLEVQQCLAIYQDMQKAG 348
+++ K G + + Y++M + G
Sbjct: 595 SIIDGFVKVG---DTDSAVETYREMSENG 620
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/299 (22%), Positives = 130/299 (43%), Gaps = 19/299 (6%)
Query: 13 NIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTY-ST 71
N+ + G + ++N LL A R+D A D + + V R + Y +
Sbjct: 155 NLVDSSKRFGFELTPRAFNYLLNAYIRNKRMDYAVDCFGLM-----VDRKVVPFVPYVNN 209
Query: 72 IIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAG 131
++ + L A ++ + M GV + V L+ A E+A+++F ++ G
Sbjct: 210 VLSSLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRG 269
Query: 132 CEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNL----KQGSIHNA 187
EP+ F++ + A + A +G + + E Y S + K+G++ A
Sbjct: 270 AEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEA 329
Query: 188 TTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKALINEMKTVGLSPNQIT 247
V + +++ F TS N K G++ A L N M+ GL+P+++
Sbjct: 330 VRVMD-----EMVGFGIPMSVIAATSLVNGYCK--GNELGKALDLFNRMEEEGLAPDKVM 382
Query: 248 WSILID-ICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEE 305
+S++++ C E +E AIE M I P + T I+ C+++++ + AL ++ +
Sbjct: 383 FSVMVEWFCKNME-MEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFND 440
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 66/137 (48%), Gaps = 4/137 (2%)
Query: 12 LNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYST 71
+++Y+ M N G+ D+ +Y ++ G ++LA D+Y EL L V D +
Sbjct: 715 IDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVP----DEILHMV 770
Query: 72 IIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAG 131
++ + + A K+ +M+ V N + +S++I G + +A +L +EML G
Sbjct: 771 LVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKG 830
Query: 132 CEPNTQCFNIILHACVE 148
+ FN+++ VE
Sbjct: 831 IVHDDTVFNLLVSGRVE 847
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 135/288 (46%), Gaps = 12/288 (4%)
Query: 65 DVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLF 124
+V Y+ +KVF +K + + K+ +M G+ + ++++I+ G+ ++A++ F
Sbjct: 174 EVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWF 233
Query: 125 EEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSI 184
E+M GCEP+ ++ A A D A + + K S L + I
Sbjct: 234 EKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKW--RIDAVTFSTLIR--I 289
Query: 185 HNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACG--SDYYHAKALINEMKTVGLS 242
+ + +G N I + P YN L+ + G + AK + ++ T G +
Sbjct: 290 YGVSGNYDGCLN--IYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFT 347
Query: 243 PNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTL 302
PN T++ L+ G + A+ I + M + G+ VI Y T + +C +++ +A +
Sbjct: 348 PNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEI 407
Query: 303 YEEMKSCEI-HPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGY 349
+++MK+CE P+ T+++L+ + G V E + L M++AG+
Sbjct: 408 FQDMKNCETCDPDSWTFSSLITVYACSGRVSEAEAALL---QMREAGF 452
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 134/303 (44%), Gaps = 48/303 (15%)
Query: 15 YQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIK 74
++ M + G +PD + ++ A AG VD+A +Y + + ++D T+ST+I+
Sbjct: 233 FEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRAR----TEKWRIDAVTFSTLIR 288
Query: 75 VFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEP 134
++ + + L + +M++ GV N V ++ LI++ A QA ++++++ G P
Sbjct: 289 IYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTP 348
Query: 135 NTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGF 194
N + ++ A Y RA R+ G+ L + E +K+ G
Sbjct: 349 NWSTYAALVRA------YGRA-RY-----GDDALAIYRE-----MKE----------KGL 381
Query: 195 SNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKA--LINEMKTVGL-SPNQITWSIL 251
S + IL YNTLL C + Y +A + +MK P+ T+S L
Sbjct: 382 SLTVIL--------------YNTLLSMCADNRYVDEAFEIFQDMKNCETCDPDSWTFSSL 427
Query: 252 IDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEI 311
I + + V A L M +AG +P + T+ I+ ++K + ++++ I
Sbjct: 428 ITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVVRTFDQVLELGI 487
Query: 312 HPN 314
P+
Sbjct: 488 TPD 490
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 79/138 (57%), Gaps = 7/138 (5%)
Query: 12 LNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYST 71
LNIY+ M+ LG+KP++ YN L+ + A R A+ +YK+L + TY+
Sbjct: 300 LNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDL----ITNGFTPNWSTYAA 355
Query: 72 IIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEML-LA 130
+++ + A+ AL + +M+ G++L + +++L++ CA V++A ++F++M
Sbjct: 356 LVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMKNCE 415
Query: 131 GCEPNTQCFN--IILHAC 146
C+P++ F+ I ++AC
Sbjct: 416 TCDPDSWTFSSLITVYAC 433
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 132/310 (42%), Gaps = 31/310 (10%)
Query: 54 KHLESVGRLK-----LDVFTYSTIIKVFADAKLWQM-ALKVKHDMRSAGVNLNTVAWSSL 107
K +ES GR+K DVFTY+ I++V +++ M A V ++M + N + L
Sbjct: 145 KAVESFGRMKEFDCRPDVFTYNVILRVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGIL 204
Query: 108 INACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKM 167
++ G A ++F++M G PN + I++ + D A + F+ + +
Sbjct: 205 MDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTS-- 262
Query: 168 LGSFGEGYNSNLKQGSIHNATTVPNGFSN-------SQILSFTERFPFTPTTSTYNTLLK 220
N HNA + +GF ++L E+ F Y++L+
Sbjct: 263 ---------GNYPDSVAHNA--LLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLID 311
Query: 221 AC--GSDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKP 278
Y A L M + P+ I ++ILI +E A+++L SM GI P
Sbjct: 312 GLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISP 371
Query: 279 DVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCL 338
D Y IK ++ +L EM E P+ T+ L+ + + G V E ++
Sbjct: 372 DTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEE-- 429
Query: 339 AIYQDMQKAG 348
I+ +++K+G
Sbjct: 430 -IFTEIEKSG 438
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 78/348 (22%), Positives = 147/348 (42%), Gaps = 26/348 (7%)
Query: 14 IYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTII 73
++ MQ G PD ++N LL C GR+ + ++ L+ E G L + YS++I
Sbjct: 255 LFYEMQTSGNYPDSVAHNALLDGFCKLGRM---VEAFELLRLFEKDG-FVLGLRGYSSLI 310
Query: 74 KVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCE 133
A+ + A ++ +M + + + ++ LI + AG +E A++L M G
Sbjct: 311 DGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGIS 370
Query: 134 PNTQCFNIILHA-CVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPN 192
P+T C+N ++ A C + ++ S E + +I + N
Sbjct: 371 PDTYCYNAVIKALCGRG--------LLEEGRSLQLEMSETESFPDACTH-TILICSMCRN 421
Query: 193 GFSN--SQILSFTERFPFTPTTSTYNTLLKA-CGS-DYYHAKALINEMKTVGLSPNQITW 248
G +I + E+ +P+ +T+N L+ C S + A+ L+++M+ VG P +
Sbjct: 422 GLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKME-VG-RPASLFL 479
Query: 249 SI------LIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTL 302
+ D + ++ A L D G PD+++Y I + + AL L
Sbjct: 480 RLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKL 539
Query: 303 YEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYV 350
++ + P+ VTYNTL+ + G E + D + + V
Sbjct: 540 LNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLFYAKDDFRHSPAV 587
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 119/274 (43%), Gaps = 36/274 (13%)
Query: 90 HDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACV-E 148
+++S GV++++ + LI+A A G+ E+A++ F M C P+ +N+IL + E
Sbjct: 116 EELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMRE 175
Query: 149 ACQYDRAFRFFHSWKGNKMLG--------SFGEGYNSNLKQGSIHNATTVPNGFSNSQIL 200
+ AF + N+ML +FG + K+G +A + + + I
Sbjct: 176 EVFFMLAFAVY-----NEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGI- 229
Query: 201 SFTERFPFTPTTSTYNTLL-----KACGSDYYHAKALINEMKTVGLSPNQITWSILID-I 254
+P TY L+ + D A+ L EM+T G P+ + + L+D
Sbjct: 230 --------SPNRVTYTILISGLCQRGSADD---ARKLFYEMQTSGNYPDSVAHNALLDGF 278
Query: 255 CGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPN 314
C VE A E+L+ G + Y++ I ++ + QA LY M I P+
Sbjct: 279 CKLGRMVE-AFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPD 337
Query: 315 WVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAG 348
+ Y L++ SK G +++ L + M G
Sbjct: 338 IILYTILIQGLSKAG---KIEDALKLLSSMPSKG 368
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 120/286 (41%), Gaps = 22/286 (7%)
Query: 4 NSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLK 63
+R T +Y M +KPD+ Y IL++ AG++ +D K L + S G +
Sbjct: 315 RARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKI---EDALKLLSSMPSKG-IS 370
Query: 64 LDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQL 123
D + Y+ +IK L + ++ +M + + LI + GLV +A ++
Sbjct: 371 PDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEI 430
Query: 124 FEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSF-------GEGYN 176
F E+ +GC P+ FN ++ ++ + A H + + F ++
Sbjct: 431 FTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGNRSFD 490
Query: 177 SNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKAC--GSDYYHAKALIN 234
+ ++ GSI A F+++ +P +YN L+ D A L+N
Sbjct: 491 TMVESGSILKAYRDLAHFADTGS---------SPDIVSYNVLINGFCRAGDIDGALKLLN 541
Query: 235 EMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDV 280
++ GLSP+ +T++ LI+ E A ++ + D P V
Sbjct: 542 VLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLFYAKDDFRHSPAV 587
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 74/163 (45%), Gaps = 8/163 (4%)
Query: 193 GFSNSQILSF--TERFPFTPTTSTYNTLLKACGSD---YYHAKALINEMKTVGLSPNQIT 247
G + + SF + F P TYN +L+ + + A A+ NEM SPN T
Sbjct: 141 GMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMREEVFFMLAFAVYNEMLKCNCSPNLYT 200
Query: 248 WSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMK 307
+ IL+D A ++ M GI P+ + YT I + + A L+ EM+
Sbjct: 201 FGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQ 260
Query: 308 SCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYV 350
+ +P+ V +N LL K G ++E + L ++ +K G+V
Sbjct: 261 TSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLF---EKDGFV 300
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 67/329 (20%), Positives = 136/329 (41%), Gaps = 23/329 (6%)
Query: 18 MQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLD----VFTYSTII 73
M+ +PD+ +YN++L RV + ++++ L LK + ++T+ ++
Sbjct: 153 MKEFDCRPDVFTYNVIL-------RVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILM 205
Query: 74 KVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCE 133
A K+ DM G++ N V ++ LI+ G + A +LF EM +G
Sbjct: 206 DGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNY 265
Query: 134 PNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNG 193
P++ N +L + + AF ++ + + GY+S + + A
Sbjct: 266 PDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGL-RGYSSLID--GLFRARRYTQA 322
Query: 194 FSNSQILSFTERFPFTPTTSTYNTLLKAC--GSDYYHAKALINEMKTVGLSPNQITWSIL 251
F ++ + + P Y L++ A L++ M + G+SP+ ++ +
Sbjct: 323 F---ELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAV 379
Query: 252 IDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKN--FKQALTLYEEMKSC 309
I G +E + M + PD +T I +C +N ++A ++ E++
Sbjct: 380 IKALCGRGLLEEGRSLQLEMSETESFPDACTHT--ILICSMCRNGLVREAEEIFTEIEKS 437
Query: 310 EIHPNWVTYNTLLKARSKYGSVLEVQQCL 338
P+ T+N L+ K G + E + L
Sbjct: 438 GCSPSVATFNALIDGLCKSGELKEARLLL 466
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/336 (24%), Positives = 155/336 (46%), Gaps = 24/336 (7%)
Query: 18 MQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFA 77
M++ G++PD+ ++ + + C AG + A + +LK + + D + S++I F
Sbjct: 297 MKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLK----LFGISQDSVSVSSVIDGFC 352
Query: 78 DAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQ 137
+ A+K+ H R + N +SS ++ G + +A +F+E+ G P+
Sbjct: 353 KVGKPEEAIKLIHSFR---LRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCV 409
Query: 138 CFNIILHACVEACQYDRAFRFFHSW--KGNK-MLGSFGEGYNSNLKQGSIHNATTVPNGF 194
C+ ++ + D+AF++F + GN L + + + GSI +A +V F
Sbjct: 410 CYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESV---F 466
Query: 195 SNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKA--LINEMKTVGLSPNQITWSILI 252
N + TE T YN L+ G + K LI+EM++ G+SP+ T++ILI
Sbjct: 467 RNMK----TEGLKLDVVT--YNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILI 520
Query: 253 DICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIH 312
++ A EI+ + G P +A+T I + +F++A L+ M +
Sbjct: 521 HSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMK 580
Query: 313 PNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAG 348
P+ VT + LL Y +++ + ++ + AG
Sbjct: 581 PDVVTCSALLHG---YCKAQRMEKAIVLFNKLLDAG 613
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 133/320 (41%), Gaps = 51/320 (15%)
Query: 7 DLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDV 66
D+ I+Q + LGL PD Y ++ C GR D A + L L+S L
Sbjct: 388 DMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGAL--LKSGNPPSL-- 443
Query: 67 FTYSTIIKVFADAKLWQM--ALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLF 124
T STI+ + A ++ + A V +M++ G+ L+ V +++L++ + + +L
Sbjct: 444 -TTSTIL-IGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELI 501
Query: 125 EEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSI 184
+EM AG P+ +NI++H+ V D A
Sbjct: 502 DEMRSAGISPDVATYNILIHSMVVRGYIDEA----------------------------- 532
Query: 185 HNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACG--SDYYHAKALINEMKTVGLS 242
++I+S R F P+T + ++ D+ A L M + +
Sbjct: 533 ------------NEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMK 580
Query: 243 PNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTL 302
P+ +T S L+ + +E AI + + DAG+KPDV+ Y T I + ++A L
Sbjct: 581 PDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACEL 640
Query: 303 YEEMKSCEIHPNWVTYNTLL 322
M + PN T++ L+
Sbjct: 641 IGLMVQRGMLPNESTHHALV 660
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 72/356 (20%), Positives = 148/356 (41%), Gaps = 30/356 (8%)
Query: 3 VNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRL 62
+ R + L + + G+ P LLK ++LA++ ++H+ S GR
Sbjct: 212 IRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREF---VEHMLSRGR- 267
Query: 63 KLDVFTYSTIIKVFADA----KLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVE 118
L+ S I+ + K W++ + +KH G+ + VA++ I+ AG ++
Sbjct: 268 HLNAAVLSLFIRKYCSDGYFDKGWELLMGMKH----YGIRPDIVAFTVFIDKLCKAGFLK 323
Query: 119 QAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSN 178
+A + ++ L G ++ + ++ + + + A + HS++ + + ++
Sbjct: 324 EATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLRPNIFVYSSFLSNI 383
Query: 179 LKQGSIHNATTVPNGFSNSQILSFTERFPF--TPTTSTYNTLLKACGSDYYHAKAL--IN 234
G + A+T+ F E F P Y T++ + KA
Sbjct: 384 CSTGDMLRASTI-----------FQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFG 432
Query: 235 EMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESK 294
+ G P+ T +ILI C ++ A + ++M G+K DV+ Y + ++
Sbjct: 433 ALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTH 492
Query: 295 NFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYV 350
+ L +EM+S I P+ TYN L+ + G + E + I ++ + G+V
Sbjct: 493 QLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANE---IISELIRRGFV 545
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/336 (24%), Positives = 155/336 (46%), Gaps = 24/336 (7%)
Query: 18 MQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFA 77
M++ G++PD+ ++ + + C AG + A + +LK + + D + S++I F
Sbjct: 297 MKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLK----LFGISQDSVSVSSVIDGFC 352
Query: 78 DAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQ 137
+ A+K+ H R + N +SS ++ G + +A +F+E+ G P+
Sbjct: 353 KVGKPEEAIKLIHSFR---LRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCV 409
Query: 138 CFNIILHACVEACQYDRAFRFFHSW--KGNK-MLGSFGEGYNSNLKQGSIHNATTVPNGF 194
C+ ++ + D+AF++F + GN L + + + GSI +A +V F
Sbjct: 410 CYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESV---F 466
Query: 195 SNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKA--LINEMKTVGLSPNQITWSILI 252
N + TE T YN L+ G + K LI+EM++ G+SP+ T++ILI
Sbjct: 467 RNMK----TEGLKLDVVT--YNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILI 520
Query: 253 DICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIH 312
++ A EI+ + G P +A+T I + +F++A L+ M +
Sbjct: 521 HSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMK 580
Query: 313 PNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAG 348
P+ VT + LL Y +++ + ++ + AG
Sbjct: 581 PDVVTCSALLHG---YCKAQRMEKAIVLFNKLLDAG 613
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 133/320 (41%), Gaps = 51/320 (15%)
Query: 7 DLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDV 66
D+ I+Q + LGL PD Y ++ C GR D A + L L+S L
Sbjct: 388 DMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGAL--LKSGNPPSL-- 443
Query: 67 FTYSTIIKVFADAKLWQM--ALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLF 124
T STI+ + A ++ + A V +M++ G+ L+ V +++L++ + + +L
Sbjct: 444 -TTSTIL-IGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELI 501
Query: 125 EEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSI 184
+EM AG P+ +NI++H+ V D A
Sbjct: 502 DEMRSAGISPDVATYNILIHSMVVRGYIDEA----------------------------- 532
Query: 185 HNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACG--SDYYHAKALINEMKTVGLS 242
++I+S R F P+T + ++ D+ A L M + +
Sbjct: 533 ------------NEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMK 580
Query: 243 PNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTL 302
P+ +T S L+ + +E AI + + DAG+KPDV+ Y T I + ++A L
Sbjct: 581 PDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACEL 640
Query: 303 YEEMKSCEIHPNWVTYNTLL 322
M + PN T++ L+
Sbjct: 641 IGLMVQRGMLPNESTHHALV 660
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 72/356 (20%), Positives = 148/356 (41%), Gaps = 30/356 (8%)
Query: 3 VNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRL 62
+ R + L + + G+ P LLK ++LA++ ++H+ S GR
Sbjct: 212 IRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREF---VEHMLSRGR- 267
Query: 63 KLDVFTYSTIIKVFADA----KLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVE 118
L+ S I+ + K W++ + +KH G+ + VA++ I+ AG ++
Sbjct: 268 HLNAAVLSLFIRKYCSDGYFDKGWELLMGMKH----YGIRPDIVAFTVFIDKLCKAGFLK 323
Query: 119 QAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSN 178
+A + ++ L G ++ + ++ + + + A + HS++ + + ++
Sbjct: 324 EATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLRPNIFVYSSFLSNI 383
Query: 179 LKQGSIHNATTVPNGFSNSQILSFTERFPF--TPTTSTYNTLLKACGSDYYHAKAL--IN 234
G + A+T+ F E F P Y T++ + KA
Sbjct: 384 CSTGDMLRASTI-----------FQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFG 432
Query: 235 EMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESK 294
+ G P+ T +ILI C ++ A + ++M G+K DV+ Y + ++
Sbjct: 433 ALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTH 492
Query: 295 NFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYV 350
+ L +EM+S I P+ TYN L+ + G + E + I ++ + G+V
Sbjct: 493 QLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANE---IISELIRRGFV 545
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/340 (25%), Positives = 140/340 (41%), Gaps = 30/340 (8%)
Query: 10 YTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTY 69
Y +++ + LG+KP YN ++ A + +DLA Y + + + S G K D FTY
Sbjct: 163 YCNDVFAQISFLGMKPSTRLYNAVIDALVKSNSLDLA---YLKFQQMRSDG-CKPDRFTY 218
Query: 70 STIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLL 129
+ +I + A+++ M G N ++ LI+ AG V++A++ E M +
Sbjct: 219 NILIHGVCKKGVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRV 278
Query: 130 AGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATT 189
PN +H FR K ++L F E +SNL++
Sbjct: 279 RKLNPNEATIRTFVHGI---------FRCLPPCKAFEVLVGFMEK-DSNLQRVGYD---A 325
Query: 190 VPNGFSNSQILSFTERF-------PFTPTTSTYNT----LLKACGSDYYHAKALINEMKT 238
V SN+ + T +F + P +ST+N LLK G D + + +
Sbjct: 326 VLYCLSNNSMAKETGQFLRKIGERGYIPDSSTFNAAMSCLLK--GHDLVETCRIFDGFVS 383
Query: 239 VGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQ 298
G+ P + +L+ + LK MG G+ V +Y I +++ +
Sbjct: 384 RGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIEN 443
Query: 299 ALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCL 338
A EM+ I PN VT+NT L S G V +V L
Sbjct: 444 AAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVL 483
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 95/410 (23%), Positives = 171/410 (41%), Gaps = 83/410 (20%)
Query: 12 LNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLD-----V 66
+ + + M+ G +P++ +Y IL+ +AGRVD A LK LE + KL+ +
Sbjct: 235 IRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEA------LKQLEMMRVRKLNPNEATI 288
Query: 67 FTY------------------------STIIKVFADAKLW-----QMALKVKHDMRSAGV 97
T+ S + +V DA L+ MA + +R G
Sbjct: 289 RTFVHGIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIG- 347
Query: 98 NLNTVAWSSLINA---CAHAG--LVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQY 152
+ SS NA C G LVE ++F+ + G +P + +++ A + A ++
Sbjct: 348 ERGYIPDSSTFNAAMSCLLKGHDLVETC-RIFDGFVSRGVKPGFNGYLVLVQALLNAQRF 406
Query: 153 DRAFRFFHSWKGNKMLGSFGEGYNSNL----KQGSIHNATTV----------PNGFSNSQ 198
R+ + +L S YN+ + K I NA PN + +
Sbjct: 407 SEGDRYLKQMGVDGLLSSV-YSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNT 465
Query: 199 ILS-FTER---------------FPFTPTTSTYNTLLKAC--GSDYYHAKALINEMKTVG 240
LS ++ R F P T++ ++ + A EM G
Sbjct: 466 FLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWG 525
Query: 241 LSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQAL 300
+ PN+IT++ILI C T + + ++++ M + G+ PD+ AY I+ + + K+A
Sbjct: 526 IEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAE 585
Query: 301 TLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYV 350
L + M + P+ TY+TL+KA S+ G E ++ ++ +++ G V
Sbjct: 586 ELLKTMLRIGLKPDNFTYSTLIKALSESGRESEARE---MFSSIERHGCV 632
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/295 (22%), Positives = 129/295 (43%), Gaps = 17/295 (5%)
Query: 7 DLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDV 66
DL T I+ + G+KP Y +L++A A R K++ V L V
Sbjct: 370 DLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQM----GVDGLLSSV 425
Query: 67 FTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEE 126
++Y+ +I A+ + A +M+ G++ N V +++ ++ + G V++ + E+
Sbjct: 426 YSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEK 485
Query: 127 MLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHN 186
+L+ G +P+ F++I++ A + AF F K + +G N I +
Sbjct: 486 LLVHGFKPDVITFSLIINCLCRAKEIKDAFDCF------KEMLEWGIEPNEITYNILIRS 539
Query: 187 ATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKA-CG-SDYYHAKALINEMKTVGLSPN 244
+ + + ++ + + +P YN +++ C A+ L+ M +GL P+
Sbjct: 540 CCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPD 599
Query: 245 QITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQA 299
T+S LI + A E+ S+ G PD +YT K VE + +++
Sbjct: 600 NFTYSTLIKALSESGRESEAREMFSSIERHGCVPD--SYT---KRLVEELDLRKS 649
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 69/132 (52%), Gaps = 4/132 (3%)
Query: 5 SRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKL 64
++++ + ++ M G++P+ +YNIL+++CC G D + ++ ++K L
Sbjct: 508 AKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKE----NGLSP 563
Query: 65 DVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLF 124
D++ Y+ I+ F + + A ++ M G+ + +S+LI A + +G +A ++F
Sbjct: 564 DLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREMF 623
Query: 125 EEMLLAGCEPNT 136
+ GC P++
Sbjct: 624 SSIERHGCVPDS 635
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/338 (21%), Positives = 154/338 (45%), Gaps = 21/338 (6%)
Query: 18 MQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFA 77
M G P++ YN ++ C ++ A +++ +E G ++ D TY+T+I +
Sbjct: 175 MDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFY---CMEKKG-IRADAVTYNTLISGLS 230
Query: 78 DAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQ 137
++ W A ++ DM ++ N + +++LI+ G + +A L++EM+ PN
Sbjct: 231 NSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVF 290
Query: 138 CFNIILHA-CVEACQYDRAFRFFHSWKGNKML--GSFGEGYNSNLKQGSIHNATTVPNGF 194
+N +++ C+ C D + F + M+ G F + N + V +G
Sbjct: 291 TYNSLINGFCIHGCLGDAKYMF------DLMVSKGCFPDVVTYNTLITGFCKSKRVEDGM 344
Query: 195 SNSQILSFTERFPFTPTTSTYNTLLKA-CGSDYYH-AKALINEMKTVGLSPNQITWSILI 252
+++ TYNTL+ C + + A+ + N M G+SP+ +T++IL+
Sbjct: 345 KLFCEMTYQ---GLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILL 401
Query: 253 DICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIH 312
D +E A+ +++ + + + D+I Y I+ + K+A L+ + +
Sbjct: 402 DCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVK 461
Query: 313 PNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYV 350
P+ + Y T++ + G E + + + M++ G++
Sbjct: 462 PDAIAYITMISGLCRKGLQREADK---LCRRMKEDGFM 496
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/329 (22%), Positives = 141/329 (42%), Gaps = 28/329 (8%)
Query: 5 SRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGR----VDLAQDMYKELKHLESVG 60
+RDL L ++ M+ G++ D +YN L+ +GR L +DM K
Sbjct: 197 NRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKR-------- 248
Query: 61 RLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQA 120
++ +V ++ +I F A + +M V N ++SLIN G + A
Sbjct: 249 KIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDA 308
Query: 121 IQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNL- 179
+F+ M+ GC P+ +N ++ ++ + + + F ++G YN+ +
Sbjct: 309 KYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGD-AFTYNTLIH 367
Query: 180 ---KQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKALI--N 234
+ G ++ A V N + + +P TYN LL ++ KAL+
Sbjct: 368 GYCQAGKLNVAQKVFNRMVDCGV---------SPDIVTYNILLDCLCNNGKIEKALVMVE 418
Query: 235 EMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESK 294
+++ + + IT++I+I T+ ++ A + +S+ G+KPD IAY T I
Sbjct: 419 DLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKG 478
Query: 295 NFKQALTLYEEMKSCEIHPNWVTYNTLLK 323
++A L MK P+ Y+ L+
Sbjct: 479 LQREADKLCRRMKEDGFMPSERIYDETLR 507
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/342 (21%), Positives = 144/342 (42%), Gaps = 27/342 (7%)
Query: 14 IYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTII 73
+Y M+NLG+ D+ S+ IL+ C R L + +G + + T +++
Sbjct: 101 LYHKMENLGISHDLYSFTILIHCFC---RCSRLSLALALLGKMMKLG-FRPSIVTLGSLL 156
Query: 74 KVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCE 133
F +Q A+ + M G N V ++++IN + A+++F M G
Sbjct: 157 NGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIR 216
Query: 134 PNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGS---FGEGYNSNLKQGSIHNATTV 190
+ +N ++ + ++ A R K+ + F ++ +K+G++ A +
Sbjct: 217 ADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNL 276
Query: 191 PNGFSNSQILSFTERFPFTPTTSTYNTLLKA-----CGSDYYHAKALINEMKTVGLSPNQ 245
++ P TYN+L+ C D AK + + M + G P+
Sbjct: 277 YKEMIRRSVV---------PNVFTYNSLINGFCIHGCLGD---AKYMFDLMVSKGCFPDV 324
Query: 246 ITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEE 305
+T++ LI ++ VE +++ M G+ D Y T I ++ A ++
Sbjct: 325 VTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNR 384
Query: 306 MKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKA 347
M C + P+ VTYN LL G ++++ L + +D+QK+
Sbjct: 385 MVDCGVSPDIVTYNILLDCLCNNG---KIEKALVMVEDLQKS 423
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 101/240 (42%), Gaps = 11/240 (4%)
Query: 113 HAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFG 172
H + A LF EML + P+ F +L + ++D +H + LG
Sbjct: 56 HCIKFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMEN---LGISH 112
Query: 173 EGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKA-C-GSDYYHAK 230
+ Y+ + IH +L + F P+ T +LL C G+ + A
Sbjct: 113 DLYSFTI---LIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAV 169
Query: 231 ALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVC 290
+L++ M G PN + ++ +I+ ++ A+E+ M GI+ D + Y T I
Sbjct: 170 SLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGL 229
Query: 291 VESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYV 350
S + A L +M +I PN + + L+ K G++LE + +Y++M + V
Sbjct: 230 SNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARN---LYKEMIRRSVV 286
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 95/231 (41%), Gaps = 10/231 (4%)
Query: 102 VAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHS 161
V ++ ++ A + I L+ +M G + F I++H C C +
Sbjct: 80 VDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIH-CFCRCSRLSLA---LA 135
Query: 162 WKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNS-QILSFTERFPFTPTTSTYNTLLK 220
G M F S + GS+ N N F + ++ + F F P YNT++
Sbjct: 136 LLGKMMKLGFRP---SIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVIN 192
Query: 221 AC--GSDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKP 278
D +A + M+ G+ + +T++ LI + A +L+ M I P
Sbjct: 193 GLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDP 252
Query: 279 DVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYG 329
+VI +T I V+ N +A LY+EM + PN TYN+L+ +G
Sbjct: 253 NVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHG 303
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 71/141 (50%), Gaps = 4/141 (2%)
Query: 3 VNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRL 62
V +L N+Y+ M + P++ +YN L+ C+ G + A+ M+ + S G
Sbjct: 265 VKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDL---MVSKGCF 321
Query: 63 KLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQ 122
DV TY+T+I F +K + +K+ +M G+ + +++LI+ AG + A +
Sbjct: 322 P-DVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQK 380
Query: 123 LFEEMLLAGCEPNTQCFNIIL 143
+F M+ G P+ +NI+L
Sbjct: 381 VFNRMVDCGVSPDIVTYNILL 401
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/349 (22%), Positives = 147/349 (42%), Gaps = 78/349 (22%)
Query: 25 PDMTSYNILLKACCVAGRVDLAQDMYKELK----------------HLESVGRLK----- 63
P +Y +L+KA C+AG ++ A+ + E++ ++E + + K
Sbjct: 210 PTEDTYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEE 269
Query: 64 -LDVF-------------TYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLIN 109
+DVF TY+ +I ++ A M+ K+ +MRS N +++L+N
Sbjct: 270 AIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVN 329
Query: 110 ACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLG 169
A A GL E+A ++FE++ G EP+ +N ++ + Y RA
Sbjct: 330 AFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMES------YSRA-------------- 369
Query: 170 SFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYH- 228
GY P G ++I S + P ++YN ++ A G H
Sbjct: 370 ----GY---------------PYG--AAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHS 408
Query: 229 -AKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAI 287
A+A+ EMK +G++P + +L+ +V I+K M + G++PD + +
Sbjct: 409 DAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSML 468
Query: 288 KVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQ 336
+ F + + EM++ + TYN L+ K G + +++
Sbjct: 469 NLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEE 517
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/338 (22%), Positives = 150/338 (44%), Gaps = 15/338 (4%)
Query: 12 LNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYST 71
++++Q M+ KP +YN+++ A + ++ +Y E++ + K ++ TY+
Sbjct: 271 IDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQC----KPNICTYTA 326
Query: 72 IIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAG 131
++ FA L + A ++ ++ G+ + +++L+ + + AG A ++F M G
Sbjct: 327 LVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMG 386
Query: 132 CEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVP 191
CEP+ +NI++ A A + A F K LG + L + A V
Sbjct: 387 CEPDRASYNIMVDAYGRAGLHSDAEAVFEEMK---RLGIAPTMKSHMLLLSAYSKARDVT 443
Query: 192 NGFSNSQILSFTERFPFTPTTSTYNTLLKACG--SDYYHAKALINEMKTVGLSPNQITWS 249
I+ P T N++L G + + ++ EM+ + + T++
Sbjct: 444 KC---EAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYN 500
Query: 250 ILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSC 309
ILI+I G +E E+ + + +PDV+ +T+ I K + + L ++EEM
Sbjct: 501 ILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDS 560
Query: 310 EIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKA 347
P+ T LL A S S +V+Q ++ + M K
Sbjct: 561 GCAPDGGTAKVLLSACS---SEEQVEQVTSVLRTMHKG 595
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 71/142 (50%), Gaps = 4/142 (2%)
Query: 5 SRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKL 64
+RD+T I + M G++PD N +L + GR+ M K L +E+ G
Sbjct: 439 ARDVTKCEAIVKEMSENGVEPDTFVLNSMLN---LYGRLGQFTKMEKILAEMEN-GPCTA 494
Query: 65 DVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLF 124
D+ TY+ +I ++ A + ++ +++ + V W+S I A + L + +++F
Sbjct: 495 DISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVF 554
Query: 125 EEMLLAGCEPNTQCFNIILHAC 146
EEM+ +GC P+ ++L AC
Sbjct: 555 EEMIDSGCAPDGGTAKVLLSAC 576
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/349 (22%), Positives = 147/349 (42%), Gaps = 78/349 (22%)
Query: 25 PDMTSYNILLKACCVAGRVDLAQDMYKELK----------------HLESVGRLK----- 63
P +Y +L+KA C+AG ++ A+ + E++ ++E + + K
Sbjct: 188 PTEDTYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEE 247
Query: 64 -LDVF-------------TYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLIN 109
+DVF TY+ +I ++ A M+ K+ +MRS N +++L+N
Sbjct: 248 AIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVN 307
Query: 110 ACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLG 169
A A GL E+A ++FE++ G EP+ +N ++ + Y RA
Sbjct: 308 AFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMES------YSRA-------------- 347
Query: 170 SFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYH- 228
GY P G ++I S + P ++YN ++ A G H
Sbjct: 348 ----GY---------------PYG--AAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHS 386
Query: 229 -AKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAI 287
A+A+ EMK +G++P + +L+ +V I+K M + G++PD + +
Sbjct: 387 DAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSML 446
Query: 288 KVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQ 336
+ F + + EM++ + TYN L+ K G + +++
Sbjct: 447 NLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEE 495
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 71/142 (50%), Gaps = 4/142 (2%)
Query: 5 SRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKL 64
+RD+T I + M G++PD N +L + GR+ M K L +E+ G
Sbjct: 417 ARDVTKCEAIVKEMSENGVEPDTFVLNSMLN---LYGRLGQFTKMEKILAEMEN-GPCTA 472
Query: 65 DVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLF 124
D+ TY+ +I ++ A + ++ +++ + V W+S I A + L + +++F
Sbjct: 473 DISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVF 532
Query: 125 EEMLLAGCEPNTQCFNIILHAC 146
EEM+ +GC P+ ++L AC
Sbjct: 533 EEMIDSGCAPDGGTAKVLLSAC 554
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 80/356 (22%), Positives = 157/356 (44%), Gaps = 25/356 (7%)
Query: 3 VNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRL 62
+ R + + +Y+ M G+ P ++N+L++A C + VD A++++ E+
Sbjct: 123 IKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPE----KGC 178
Query: 63 KLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQ 122
K + FT+ +++ + A L L++ + M S GV N V +++++++ G + + +
Sbjct: 179 KPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEK 238
Query: 123 LFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEG---YNSNL 179
+ E+M G P+ FN + A + + A R F + ++ LG YN L
Sbjct: 239 MVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLML 298
Query: 180 KQ----GSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKAC--GSDYYHAKALI 233
K G + +A T+ + L+ + +YN L+ + A+ ++
Sbjct: 299 KGFCKVGLLEDAKTLFESIRENDDLA---------SLQSYNIWLQGLVRHGKFIEAETVL 349
Query: 234 NEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVES 293
+M G+ P+ +++IL+D + A I+ M G+ PD + Y +
Sbjct: 350 KQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSV 409
Query: 294 KNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGY 349
A +L +EM PN T N LL + K G + E ++ L + M + GY
Sbjct: 410 GKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELL---RKMNEKGY 462
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 141/326 (43%), Gaps = 55/326 (16%)
Query: 14 IYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTII 73
I +M+ G+ PD +Y LL C G+VD A+ + +E+ + + +T + ++
Sbjct: 383 IVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLP----NAYTCNILL 438
Query: 74 KVFADAKLWQM-----ALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEML 128
LW+M A ++ M G L+TV + +++ +G +++AI++ + M
Sbjct: 439 H-----SLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMR 493
Query: 129 LAG-----------------------CEPNTQCFNIILHACVEACQYDRAFRFFHSWKGN 165
+ G C P+ ++ +L+ +A ++ A F G
Sbjct: 494 VHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGE 553
Query: 166 KMLGSFGEGYNSNL----KQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKA 221
K L YN + KQG I +A ++L E+ + TYN+L+
Sbjct: 554 K-LQPDSVAYNIFIHHFCKQGKISSAF---------RVLKDMEKKGCHKSLETYNSLILG 603
Query: 222 CG--SDYYHAKALINEMKTVGLSPNQITWSILID-ICGGTENVEGAIEILKSMGDAGIKP 278
G + + L++EMK G+SPN T++ I +C G E VE A +L M I P
Sbjct: 604 LGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEG-EKVEDATNLLDEMMQKNIAP 662
Query: 279 DVIAYTTAIKVCVESKNFKQALTLYE 304
+V ++ I+ + +F A ++E
Sbjct: 663 NVFSFKYLIEAFCKVPDFDMAQEVFE 688
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/362 (21%), Positives = 147/362 (40%), Gaps = 46/362 (12%)
Query: 18 MQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFA 77
M+ GL PD+ ++N + A C G+V A ++ +++ E +G + + TY+ ++K F
Sbjct: 243 MREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFC 302
Query: 78 DAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQ 137
L + A + +R + +++ + G +A + ++M G P+
Sbjct: 303 KVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIY 362
Query: 138 CFNIILHACVEACQYDRAFRFFHSWKGNKM------LGSFGEGYNSNLKQGSIHNATTVP 191
+NI++ + A K N + G GY S G + A +
Sbjct: 363 SYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCS---VGKVDAAKS-- 417
Query: 192 NGFSNSQILSFTERFPFTPTTSTYNTLLKAC--GSDYYHAKALINEMKTVGLSPNQITWS 249
+L R P T N LL + A+ L+ +M G + +T +
Sbjct: 418 -------LLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCN 470
Query: 250 ILIDICGGTENVEGAIEILKSM---GDAGIK--------------------PDVIAYTTA 286
I++D G+ ++ AIEI+K M G A + PD+I Y+T
Sbjct: 471 IIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTL 530
Query: 287 IKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQK 346
+ ++ F +A L+ EM ++ P+ V YN + K G ++ + +DM+K
Sbjct: 531 LNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQG---KISSAFRVLKDMEK 587
Query: 347 AG 348
G
Sbjct: 588 KG 589
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 73/350 (20%), Positives = 125/350 (35%), Gaps = 63/350 (18%)
Query: 14 IYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTII 73
+ + M + G+ P + SYNIL+ C G + A+ + +K + D TY ++
Sbjct: 348 VLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKR----NGVCPDAVTYGCLL 403
Query: 74 KVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCE 133
+ A + +M N + L+++ G + +A +L +M G
Sbjct: 404 HGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYG 463
Query: 134 PNTQCFNIILHACVEACQYDRAFRFFHSWK--GNKMLGSFGEGYNSNLKQGSIHNATTVP 191
+T NII+ + + D+A + G+ LG+ G Y + I N
Sbjct: 464 LDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCL-- 521
Query: 192 NGFSNSQILSFTERFPFTPTTSTYNTLLKAC--GSDYYHAKALINEMKTVGLSPNQITWS 249
P TY+TLL + AK L EM L P+ + ++
Sbjct: 522 ------------------PDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYN 563
Query: 250 ILIDICGGTENVEGAIEILKSM-----------------------------------GDA 274
I I + A +LK M +
Sbjct: 564 IFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEK 623
Query: 275 GIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKA 324
GI P++ Y TAI+ E + + A L +EM I PN ++ L++A
Sbjct: 624 GISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEA 673
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 65/149 (43%), Gaps = 4/149 (2%)
Query: 13 NIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTI 72
N++ M L+PD +YNI + C G++ A ++ LK +E G K + TY+++
Sbjct: 545 NLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSA---FRVLKDMEKKGCHK-SLETYNSL 600
Query: 73 IKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGC 132
I + +M+ G++ N +++ I VE A L +EM+
Sbjct: 601 ILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNI 660
Query: 133 EPNTQCFNIILHACVEACQYDRAFRFFHS 161
PN F ++ A + +D A F +
Sbjct: 661 APNVFSFKYLIEAFCKVPDFDMAQEVFET 689
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 76/326 (23%), Positives = 145/326 (44%), Gaps = 37/326 (11%)
Query: 12 LNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYST 71
L +++ M+ G++P + +YN L+ A VD A+ +++ ++ GR+K D+ TY+T
Sbjct: 207 LWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMES----GRIKPDIVTYNT 262
Query: 72 IIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAG 131
+IK + A Q A++ DM + G + + + ++I AC + L++EM G
Sbjct: 263 MIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKG 322
Query: 132 CEPNTQCFNIILHACVEACQYDRAFRFFHSW--KGNK----MLGSFGEGYNSNLKQGSIH 185
+ F++++ + + + + F + KG+K + +GY K GS+
Sbjct: 323 IQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGY---AKSGSVE 379
Query: 186 NATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKA-CGS-------DYYHAKALINEMK 237
+A + + + F P TY+ ++ C + DY+H +
Sbjct: 380 DAIRLLHRMIDEG---------FKPDVVTYSVVVNGLCKNGRVEEALDYFHT------CR 424
Query: 238 TVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFK 297
GL+ N + +S LID G V+ A + + M + G D Y I + +
Sbjct: 425 FDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVD 484
Query: 298 QALTLYEEMKSCEIHPNWV-TYNTLL 322
+A+ L++ M+ E V TY LL
Sbjct: 485 EAIALFKRMEEEEGCDQTVYTYTILL 510
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 70/323 (21%), Positives = 129/323 (39%), Gaps = 52/323 (16%)
Query: 69 YSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEML 128
Y +++ V A AK V +++ + A ++LI + G+VE+ + ++ +M
Sbjct: 155 YVSLVDVLALAKDVDRIRFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMK 214
Query: 129 LAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKM---LGSFGEGYNSNLKQGSIH 185
G EP +N +++ V A D A R F + ++ + ++ K G
Sbjct: 215 ENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQ 274
Query: 186 NATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKAC--GSDYYHAKALINEMKTVGL-- 241
A + L E TY T+++AC SD+ AL EM G+
Sbjct: 275 KAM---------EKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQV 325
Query: 242 ---------------------------------SPNQITWSILIDICGGTENVEGAIEIL 268
PN +++LID + +VE AI +L
Sbjct: 326 PPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLL 385
Query: 269 KSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKY 328
M D G KPDV+ Y+ + ++ ++AL + + + N + Y++L+ K
Sbjct: 386 HRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKA 445
Query: 329 GSVLEVQQCLAIYQDMQKAGYVR 351
G V E ++ ++++M + G R
Sbjct: 446 GRVDEAER---LFEEMSEKGCTR 465
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/317 (20%), Positives = 137/317 (43%), Gaps = 45/317 (14%)
Query: 18 MQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFA 77
M GL+PD + LL A C G V A ++++++ + ++ +++++ +
Sbjct: 193 MPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMRE-----KFPPNLRYFTSLLYGWC 247
Query: 78 DAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQ 137
A +V M+ AG+ + V +++L++ AHAG + A L +M G EPN
Sbjct: 248 REGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVN 307
Query: 138 CFNIILHA-CVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSN 196
C+ +++ A C + D A R F E Y + I T + +GF
Sbjct: 308 CYTVLIQALCRTEKRMDEAMRVFVEM----------ERYGC---EADIVTYTALISGFCK 354
Query: 197 SQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKALINEMKTVGLSPNQITWSILIDICG 256
++ +++++M+ G+ P+Q+T+ ++
Sbjct: 355 WGMID--------------------------KGYSVLDDMRKKGVMPSQVTYMQIMVAHE 388
Query: 257 GTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWV 316
E E +E+++ M G PD++ Y I++ + K+A+ L+ EM++ + P
Sbjct: 389 KKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVD 448
Query: 317 TYNTLLKARSKYGSVLE 333
T+ ++ + G ++E
Sbjct: 449 TFVIMINGFTSQGFLIE 465
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/283 (21%), Positives = 127/283 (44%), Gaps = 13/283 (4%)
Query: 69 YSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEML 128
+ +++ FA A + + A++V +M G+ + + L++A G V++A ++FE+M
Sbjct: 170 FVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMR 229
Query: 129 LAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNAT 188
PN + F +L+ + A K + +NL G H A
Sbjct: 230 -EKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIV--VFTNLLSGYAH-AG 285
Query: 189 TVPNGFSNSQILSFTERFPFTPTTSTYNTLLKA-CGSDYYHAKAL--INEMKTVGLSPNQ 245
+ + + +++ + F P + Y L++A C ++ +A+ EM+ G +
Sbjct: 286 KMADAYD---LMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADI 342
Query: 246 ITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEE 305
+T++ LI ++ +L M G+ P + Y + + + F++ L L E+
Sbjct: 343 VTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEK 402
Query: 306 MKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAG 348
MK HP+ + YN +++ K G EV++ + ++ +M+ G
Sbjct: 403 MKRRGCHPDLLIYNVVIRLACKLG---EVKEAVRLWNEMEANG 442
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/342 (23%), Positives = 145/342 (42%), Gaps = 44/342 (12%)
Query: 12 LNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYST 71
L + +M G +PD+ +YN L++ C + ++ A +M+K++K S DV TY++
Sbjct: 226 LELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVK---SGSVCSPDVVTYTS 282
Query: 72 IIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAG 131
+I + A + A + DM G+ V ++ L++ A AG + A ++ +M+ G
Sbjct: 283 MISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFG 342
Query: 132 CEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVP 191
C P+ F ++ Q + FR W+ G F P
Sbjct: 343 CFPDVVTFTSLIDGYCRVGQVSQGFRL---WEEMNARGMF-------------------P 380
Query: 192 NGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKALINEMKTVGLSPNQITWSIL 251
N F+ S +++ N LLK A+ L+ ++ + + P ++ +
Sbjct: 381 NAFTYSILIN---------ALCNENRLLK--------ARELLGQLASKDIIPQPFMYNPV 423
Query: 252 IDICGGTENVEGAIEILKSMGDAGIKPDVIAYTT-AIKVCVESKNFKQALTLYEEMKSCE 310
ID V A I++ M KPD I +T I C++ + F +A++++ +M +
Sbjct: 424 IDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMF-EAVSIFHKMVAIG 482
Query: 311 IHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYVRL 352
P+ +T ++LL K G E I + Q V L
Sbjct: 483 CSPDKITVSSLLSCLLKAGMAKEAYHLNQIARKGQSNNVVPL 524
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/329 (24%), Positives = 141/329 (42%), Gaps = 29/329 (8%)
Query: 21 LGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAK 80
L ++ +YN+L ++ C AG DLA M++ +K +L F S+ FA+
Sbjct: 97 LNIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSS----FAEKG 152
Query: 81 LWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFN 140
A + ++S V + +SL+N VE A++LF+E L +T+ FN
Sbjct: 153 KLHFATALL--LQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFN 210
Query: 141 IILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQIL 200
I++ + ++A G FG + I T+ GF S L
Sbjct: 211 ILIRGLCGVGKAEKALELLGVMSG------FG-------CEPDIVTYNTLIQGFCKSNEL 257
Query: 201 S-FTERFP-------FTPTTSTYNTLLKA-C-GSDYYHAKALINEMKTVGLSPNQITWSI 250
+ +E F +P TY +++ C A +L+++M +G+ P +T+++
Sbjct: 258 NKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNV 317
Query: 251 LIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCE 310
L+D + A EI M G PDV+ +T+ I Q L+EEM +
Sbjct: 318 LVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARG 377
Query: 311 IHPNWVTYNTLLKARSKYGSVLEVQQCLA 339
+ PN TY+ L+ A +L+ ++ L
Sbjct: 378 MFPNAFTYSILINALCNENRLLKARELLG 406
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/342 (23%), Positives = 145/342 (42%), Gaps = 44/342 (12%)
Query: 12 LNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYST 71
L + +M G +PD+ +YN L++ C + ++ A +M+K++K S DV TY++
Sbjct: 226 LELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVK---SGSVCSPDVVTYTS 282
Query: 72 IIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAG 131
+I + A + A + DM G+ V ++ L++ A AG + A ++ +M+ G
Sbjct: 283 MISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFG 342
Query: 132 CEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVP 191
C P+ F ++ Q + FR W+ G F P
Sbjct: 343 CFPDVVTFTSLIDGYCRVGQVSQGFRL---WEEMNARGMF-------------------P 380
Query: 192 NGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKALINEMKTVGLSPNQITWSIL 251
N F+ S +++ N LLK A+ L+ ++ + + P ++ +
Sbjct: 381 NAFTYSILIN---------ALCNENRLLK--------ARELLGQLASKDIIPQPFMYNPV 423
Query: 252 IDICGGTENVEGAIEILKSMGDAGIKPDVIAYTT-AIKVCVESKNFKQALTLYEEMKSCE 310
ID V A I++ M KPD I +T I C++ + F +A++++ +M +
Sbjct: 424 IDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMF-EAVSIFHKMVAIG 482
Query: 311 IHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYVRL 352
P+ +T ++LL K G E I + Q V L
Sbjct: 483 CSPDKITVSSLLSCLLKAGMAKEAYHLNQIARKGQSNNVVPL 524
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/329 (24%), Positives = 141/329 (42%), Gaps = 29/329 (8%)
Query: 21 LGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAK 80
L ++ +YN+L ++ C AG DLA M++ +K +L F S+ FA+
Sbjct: 97 LNIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSS----FAEKG 152
Query: 81 LWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFN 140
A + ++S V + +SL+N VE A++LF+E L +T+ FN
Sbjct: 153 KLHFATALL--LQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFN 210
Query: 141 IILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQIL 200
I++ + ++A G FG + I T+ GF S L
Sbjct: 211 ILIRGLCGVGKAEKALELLGVMSG------FG-------CEPDIVTYNTLIQGFCKSNEL 257
Query: 201 S-FTERFP-------FTPTTSTYNTLLKA-C-GSDYYHAKALINEMKTVGLSPNQITWSI 250
+ +E F +P TY +++ C A +L+++M +G+ P +T+++
Sbjct: 258 NKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNV 317
Query: 251 LIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCE 310
L+D + A EI M G PDV+ +T+ I Q L+EEM +
Sbjct: 318 LVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARG 377
Query: 311 IHPNWVTYNTLLKARSKYGSVLEVQQCLA 339
+ PN TY+ L+ A +L+ ++ L
Sbjct: 378 MFPNAFTYSILINALCNENRLLKARELLG 406
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/345 (21%), Positives = 150/345 (43%), Gaps = 18/345 (5%)
Query: 7 DLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDV 66
DL +++Y+ M+ + + ++ +Y L+ C G + A++MY + R++ +
Sbjct: 213 DLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVE----DRVEPNS 268
Query: 67 FTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEE 126
Y+TII F A+K M + G+ L+ A+ +I+ G +++A ++ E+
Sbjct: 269 LVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVED 328
Query: 127 MLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHN 186
M + P+ F +++A ++ + A +H G+ ++ S
Sbjct: 329 MEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKL--------IERGFEPDVVALSTMI 380
Query: 187 ATTVPNGFSNSQILSF-TERFPFTPTTSTYNTLLKACGSDYYHAKALINEMKTVGLSPNQ 245
NG + I+ F E+ T + L K D+ + L +++ GL P++
Sbjct: 381 DGIAKNGQLHEAIVYFCIEKANDVMYTVLIDALCKE--GDFIEVERLFSKISEAGLVPDK 438
Query: 246 ITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEE 305
++ I N+ A ++ M G+ D++AYTT I +A +++E
Sbjct: 439 FMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDE 498
Query: 306 MKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYV 350
M + I P+ ++ L++A K G++ L DMQ+ G V
Sbjct: 499 MLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLL---DMQRRGLV 540
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/360 (20%), Positives = 138/360 (38%), Gaps = 74/360 (20%)
Query: 8 LTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKH------------ 55
+ + +I M G +PD+ SYN L+ C G + A + + L+
Sbjct: 72 VKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASHGFICKPDIVS 131
Query: 56 ----LESVGRLKL-----------------DVFTYSTIIKVFADAKLWQMALKVKHDMRS 94
++K+ +V TYST I F + Q+ALK H M+
Sbjct: 132 FNSLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQLALKSFHSMKR 191
Query: 95 AGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDR 154
++ N V ++ LI+ AG +E A+ L++EM N + ++ + + R
Sbjct: 192 DALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQR 251
Query: 155 AFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILS-FTERFPFTPTTS 213
A E S + + + PN + I+ F +R
Sbjct: 252 A-----------------EEMYSRMVEDRVE-----PNSLVYTTIIDGFFQR-------- 281
Query: 214 TYNTLLKACGSDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGD 273
D +A + +M G+ + + ++I G ++ A EI++ M
Sbjct: 282 ----------GDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEK 331
Query: 274 AGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLE 333
+ + PD++ +TT + +S K A+ +Y ++ P+ V +T++ +K G + E
Sbjct: 332 SDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHE 391
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/355 (18%), Positives = 153/355 (43%), Gaps = 25/355 (7%)
Query: 3 VNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRL 62
+NS +L + + G P +S+N ++ C G+V A+D+ +
Sbjct: 32 INSNCGILSLKFLAYLVSRGYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGC---- 87
Query: 63 KLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAG---VNLNTVAWSSLINACAHAGLVEQ 119
+ DV +Y+++I + A V +R++ + V+++SL N + ++++
Sbjct: 88 EPDVISYNSLIDGHCRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDE 147
Query: 120 AIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKM---LGSFGEGYN 176
++ ++L C PN ++ + ++ + A + FHS K + + + +F +
Sbjct: 148 VF-VYMGVMLKCCSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLID 206
Query: 177 SNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKA-CG-SDYYHAKALIN 234
K G + A + + R + TY L+ C + A+ + +
Sbjct: 207 GYCKAGDLEVAVS---------LYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYS 257
Query: 235 EMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESK 294
M + PN + ++ +ID + + A++ L M + G++ D+ AY I +
Sbjct: 258 RMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNG 317
Query: 295 NFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGY 349
K+A + E+M+ ++ P+ V + T++ A K G ++ + +Y + + G+
Sbjct: 318 KLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSG---RMKAAVNMYHKLIERGF 369
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 119/285 (41%), Gaps = 22/285 (7%)
Query: 65 DVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLF 124
D FT + I ++ ++LK + S G + +++S+++ G V+ A +
Sbjct: 20 DPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFNSVVSFVCKLGQVKFAEDIV 79
Query: 125 EEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSI 184
M GCEP+ +N ++ A S + + G+ + + I
Sbjct: 80 HSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRAS-------HGF---ICKPDI 129
Query: 185 HNATTVPNGFSNSQILSFTERFPF--------TPTTSTYNTLLKA-CGS-DYYHAKALIN 234
+ ++ NGFS ++L E F + +P TY+T + C S + A +
Sbjct: 130 VSFNSLFNGFSKMKMLD--EVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQLALKSFH 187
Query: 235 EMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESK 294
MK LSPN +T++ LID ++E A+ + K M + +V+ YT I +
Sbjct: 188 SMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKG 247
Query: 295 NFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLA 339
++A +Y M + PN + Y T++ + G + LA
Sbjct: 248 EMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLA 292
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 145/337 (43%), Gaps = 22/337 (6%)
Query: 1 MNVNSRDLTYTLNI-YQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESV 59
M++ DL + + Y+ M+ G M Y ++ A C G + A+ ++ + V
Sbjct: 168 MSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFV 227
Query: 60 GRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNL--NTVAWSSLINACAHAGLV 117
LD ++++ F + ALKV D+ S V N+V++S LI+ G +
Sbjct: 228 ----LDSHIGTSLLLGFCRGLNLRDALKV-FDVMSKEVTCAPNSVSYSILIHGLCEVGRL 282
Query: 118 EQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSW--KGNKM-LGSFGEG 174
E+A L ++M GC+P+T+ + +++ A + D+AF F +G K + ++
Sbjct: 283 EEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVL 342
Query: 175 YNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSD--YYHAKAL 232
+ + G I A V +I P+ TYN L+ D A L
Sbjct: 343 IDGLCRDGKIEEANGVCRKMVKDRIF---------PSVITYNALINGYCKDGRVVPAFEL 393
Query: 233 INEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVE 292
+ M+ PN T++ L++ A+ +LK M D G+ PD+++Y I
Sbjct: 394 LTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCR 453
Query: 293 SKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYG 329
+ A L M +I P+ +T+ ++ A K G
Sbjct: 454 EGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQG 490
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 115/264 (43%), Gaps = 8/264 (3%)
Query: 68 TYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEM 127
+YS +I + + A +K M G +T ++ LI A GL+++A LF+EM
Sbjct: 268 SYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEM 327
Query: 128 LLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNA 187
+ GC+PN + +++ + + A +++ S YN+ L G +
Sbjct: 328 IPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVIT-YNA-LINGYCKDG 385
Query: 188 TTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKA-CG-SDYYHAKALINEMKTVGLSPNQ 245
VP ++L+ E+ P T+N L++ C Y A L+ M GLSP+
Sbjct: 386 RVVP----AFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDI 441
Query: 246 ITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEE 305
+++++LID ++ A ++L SM I+PD + +T I + A
Sbjct: 442 VSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGL 501
Query: 306 MKSCEIHPNWVTYNTLLKARSKYG 329
M I + VT TL+ K G
Sbjct: 502 MLRKGISLDEVTGTTLIDGVCKVG 525
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 75/369 (20%), Positives = 147/369 (39%), Gaps = 38/369 (10%)
Query: 12 LNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYST 71
N++ M G KP++ +Y +L+ C G+++ A + +++ R+ V TY+
Sbjct: 321 FNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVK----DRIFPSVITYNA 376
Query: 72 IIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAG 131
+I + A ++ M N ++ L+ G +A+ L + ML G
Sbjct: 377 LINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNG 436
Query: 132 CEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLG---SFGEGYNSNLKQGSIHNA- 187
P+ +N+++ + A++ S + +F N+ KQG A
Sbjct: 437 LSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVAS 496
Query: 188 ------------------TTVPNGFSNSQ-------ILSFTERFPFTPTTSTYNTLLK-- 220
TT+ +G IL + T + N +L
Sbjct: 497 AFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDML 556
Query: 221 ACGSDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDV 280
+ G A++ ++ +GL P+ +T++ L+D + ++ G+ IL+ M +G P+V
Sbjct: 557 SKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNV 616
Query: 281 IAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAI 340
YT I + ++A L M+ + PN VTY ++K G ++ + L
Sbjct: 617 YPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNG---KLDRALET 673
Query: 341 YQDMQKAGY 349
+ M + GY
Sbjct: 674 VRAMVERGY 682
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/278 (21%), Positives = 121/278 (43%), Gaps = 10/278 (3%)
Query: 12 LNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYST 71
+++ + M + GL PD+ SYN+L+ C G ++ A YK L + ++ D T++
Sbjct: 426 VHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTA---YKLLSSMNCFD-IEPDCLTFTA 481
Query: 72 IIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAG 131
II F +A M G++L+ V ++LI+ G A+ + E ++
Sbjct: 482 IINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMR 541
Query: 132 CEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVP 191
N+IL + C+ K NK+ + L G I + +
Sbjct: 542 ILTTPHSLNVILDMLSKGCKVKEELAML--GKINKLGLVPSVVTYTTLVDGLIRSGD-IT 598
Query: 192 NGFSNSQILSFTERFP-FTPTTSTYNTLLKACGSDYYHAKALINEMKTVGLSPNQITWSI 250
F +++ + P P T N L + A+ L++ M+ G+SPN +T+++
Sbjct: 599 GSFRILELMKLSGCLPNVYPYTIIINGLCQF--GRVEEAEKLLSAMQDSGVSPNHVTYTV 656
Query: 251 LIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIK 288
++ ++ A+E +++M + G + + Y++ ++
Sbjct: 657 MVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQ 694
>AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19704600-19706417 REVERSE
LENGTH=499
Length = 499
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/326 (22%), Positives = 148/326 (45%), Gaps = 12/326 (3%)
Query: 14 IYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTII 73
++++M + GLKP + Y L+ V G+ +L + L++++SV K DVFT++ +I
Sbjct: 166 LFEVMLSEGLKPTIDVYTSLIS---VYGKSELLDKAFSTLEYMKSVSDCKPDVFTFTVLI 222
Query: 74 KVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCE 133
+ + + +M GV +TV ++++I+ AG+ E+ + +M+ G
Sbjct: 223 SCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGDS 282
Query: 134 PNTQCFNIILHACVEACQYDRAFRFFHSWKGN-KMLGSFGEGYNSNLKQGSIHNATTVPN 192
C L++ + + R R SW +++G + N+ S A
Sbjct: 283 LPDVC---TLNSIIGSYGNGRNMRKMESWYSRFQLMGVQPDITTFNILILSFGKAGMYKK 339
Query: 193 GFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKA--LINEMKTVGLSPNQITWSI 250
S ++ F E+ F+ TT TYN +++ G K + +MK G+ PN IT+
Sbjct: 340 MCS---VMDFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCS 396
Query: 251 LIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCE 310
L++ V +L+ + ++ + D + I ++ + LY +M+ +
Sbjct: 397 LVNAYSKAGLVVKIDSVLRQIVNSDVVLDTPFFNCIINAYGQAGDLATMKELYIQMEERK 456
Query: 311 IHPNWVTYNTLLKARSKYGSVLEVQQ 336
P+ +T+ T++K + +G VQ+
Sbjct: 457 CKPDKITFATMIKTYTAHGIFDAVQE 482
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 73/145 (50%), Gaps = 10/145 (6%)
Query: 4 NSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGR-- 61
N R++ + Y Q +G++PD+T++NIL+ + AG MYK++ +
Sbjct: 298 NGRNMRKMESWYSRFQLMGVQPDITTFNILILSFGKAG-------MYKKMCSVMDFMEKR 350
Query: 62 -LKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQA 120
L TY+ +I+ F A + V M+ GV N++ + SL+NA + AGLV +
Sbjct: 351 FFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKI 410
Query: 121 IQLFEEMLLAGCEPNTQCFNIILHA 145
+ +++ + +T FN I++A
Sbjct: 411 DSVLRQIVNSDVVLDTPFFNCIINA 435
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 67/146 (45%), Gaps = 10/146 (6%)
Query: 208 FTPTTSTYNTLLKACGS--DYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGA- 264
+ P TY L K G+ A L M + GL P ++ LI + G +E ++ A
Sbjct: 140 YEPRCKTYTKLFKVLGNCKQPDQASLLFEVMLSEGLKPTIDVYTSLISVYGKSELLDKAF 199
Query: 265 --IEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLL 322
+E +KS+ D KPDV +T I C + F ++ EM + + VTYNT++
Sbjct: 200 STLEYMKSVSDC--KPDVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTII 257
Query: 323 KARSKYGSVLEVQQCLAIYQDMQKAG 348
K G E++ LA DM + G
Sbjct: 258 DGYGKAGMFEEMESVLA---DMIEDG 280
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 129/278 (46%), Gaps = 11/278 (3%)
Query: 65 DVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLF 124
DV TY+T+IK + A V MR AG+ + ++SLI+ A ++ + +QLF
Sbjct: 47 DVITYNTLIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLF 106
Query: 125 EEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSI 184
+EML +G P+ +N ++ + ++ AF+ H + L G ++ +I
Sbjct: 107 DEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHE---DIHLAGLVPGIDTY----NI 159
Query: 185 HNATTVPNGFSNSQILSFTE-RFPFTPTTSTYNTLLKA-CGSDYYHAKA-LINEMKTVGL 241
+G +++ I F + P TYN L+ C S + ++ E+K G
Sbjct: 160 LLDALCKSGHTDNAIELFKHLKSRVKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGY 219
Query: 242 SPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALT 301
+PN +T++ ++ + T+ +E +++ M G D A + +++ ++A
Sbjct: 220 TPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYE 279
Query: 302 -LYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCL 338
++E ++S + V+YNTLL K G++ V L
Sbjct: 280 CMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLL 317
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/288 (21%), Positives = 121/288 (42%), Gaps = 47/288 (16%)
Query: 22 GLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKL 81
GL P + +YNILL A C +G D A +++K LK R+K ++ TY+ +I ++
Sbjct: 149 GLVPGIDTYNILLDALCKSGHTDNAIELFKHLK-----SRVKPELMTYNILINGLCKSRR 203
Query: 82 WQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNI 141
+ +++ +G N V +++++ +E+ +QLF +M G +
Sbjct: 204 VGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCA 263
Query: 142 ILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILS 201
++ A ++ + + A+ H V +G + I+S
Sbjct: 264 VVSALIKTGRAEEAYECMHEL---------------------------VRSGTRSQDIVS 296
Query: 202 FTERFPFTPTTSTYNTLLKACGSD--YYHAKALINEMKTVGLSPNQITWSILIDICGGTE 259
YNTLL D L+ E++ GL P+ T +I+++
Sbjct: 297 -------------YNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIG 343
Query: 260 NVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMK 307
N GA + L +G+ G++P V+ I ++ + +A+ L+ M+
Sbjct: 344 NTGGAEKHLACIGEMGMQPSVVTCNCLIDGLCKAGHVDRAMRLFASME 391
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 129/311 (41%), Gaps = 32/311 (10%)
Query: 27 MTSYNILLKACCVAGRVDLAQD---MYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQ 83
+ S +ILL C GRV D ++ ++K + K Y T++ + +
Sbjct: 83 VVSEDILLSICRGYGRVHRPFDSLRVFHKMKDFDCDPSQK----AYVTVLAILVEENQLN 138
Query: 84 MALKVKHDMRSAGVNLNTVAWSSLINA-CAHAGLVEQAIQLFEEMLLAGCEPNTQCFNII 142
+A K +MR G+ + + LI A C + G V+ +++F EM GC+P++ + +
Sbjct: 139 LAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTL 198
Query: 143 LHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSF 202
+ + D A + F ++ T++ NG S+ +
Sbjct: 199 ISGLCRFGRIDEAKKLFTEMVEKDC-------------APTVVTYTSLINGLCGSKNVDE 245
Query: 203 TERF-------PFTPTTSTYNTLLKACGSD--YYHAKALINEMKTVGLSPNQITWSILID 253
R+ P TY++L+ D A L M G PN +T++ LI
Sbjct: 246 AMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLIT 305
Query: 254 ICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIK-VCVESKNFKQALTLYEEMKSCEIH 312
+ ++ A+E+L M G+KPD Y I C SK F++A +EM I
Sbjct: 306 GLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISK-FREAANFLDEMILGGIT 364
Query: 313 PNWVTYNTLLK 323
PN +T+N +K
Sbjct: 365 PNRLTWNIHVK 375
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 117/244 (47%), Gaps = 14/244 (5%)
Query: 102 VAWSSLINACAHAGLVEQ---AIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRF 158
V+ L++ C G V + ++++F +M C+P+ + + +L VE Q + AF+F
Sbjct: 84 VSEDILLSICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKF 143
Query: 159 FHSWKGNKMLGSFGEGYNSN-LKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNT 217
+K + +G + N L + N TV G +I + P + TY T
Sbjct: 144 ---YKNMREIGLPPTVASLNVLIKALCRNDGTVDAGL---KIFLEMPKRGCDPDSYTYGT 197
Query: 218 LLKA-CG-SDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAG 275
L+ C AK L EM +P +T++ LI+ G++NV+ A+ L+ M G
Sbjct: 198 LISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKG 257
Query: 276 IKPDVIAYTTAIK-VCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEV 334
I+P+V Y++ + +C + ++ QA+ L+E M + PN VTY TL+ K + E
Sbjct: 258 IEPNVFTYSSLMDGLCKDGRSL-QAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEA 316
Query: 335 QQCL 338
+ L
Sbjct: 317 VELL 320
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 78/338 (23%), Positives = 133/338 (39%), Gaps = 37/338 (10%)
Query: 3 VNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCV-AGRVDLAQDMYKELKHLESVGR 61
V L Y+ M+ +GL P + S N+L+KA C G VD ++ E+
Sbjct: 132 VEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGC--- 188
Query: 62 LKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAI 121
D +TY T+I A K+ +M V ++SLIN + V++A+
Sbjct: 189 -DPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAM 247
Query: 122 QLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQ 181
+ EEM G EPN ++ ++ + + +A F G N+
Sbjct: 248 RYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMM--------MARGCRPNM-- 297
Query: 182 GSIHNATTVPNGFSNSQ-------ILSFTERFPFTPTTSTYNTLLKA-CG-SDYYHAKAL 232
TT+ G Q +L P Y ++ C S + A
Sbjct: 298 ---VTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANF 354
Query: 233 INEMKTVGLSPNQITWSILIDICGGTENVEG--------AIEILKSMGDAGIKPDVIAYT 284
++EM G++PN++TW+I + E V G A + SM GI +V
Sbjct: 355 LDEMILGGITPNRLTWNIHVKT--SNEVVRGLCANYPSRAFTLYLSMRSRGISVEVETLE 412
Query: 285 TAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLL 322
+ +K + F++A+ L +E+ + P+ T+ L+
Sbjct: 413 SLVKCLCKKGEFQKAVQLVDEIVTDGCIPSKGTWKLLI 450
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/283 (21%), Positives = 121/283 (42%), Gaps = 48/283 (16%)
Query: 68 TYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEM 127
Y I++ ++ ++ ++ +RS + S+I + +QA+ +F+ M
Sbjct: 45 VYHHILRRLSETRMVNHVSRIVELIRSQECKCDEDVALSVIKTYGKNSMPDQALDVFKRM 104
Query: 128 L-LAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHN 186
+ GCEP + +N +L+A VEA Q+ + F
Sbjct: 105 REIFGCEPAIRSYNTLLNAFVEAKQWVKVESLF--------------------------- 137
Query: 187 ATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLK-ACGS-DYYHAKALINEMKTVGLSPN 244
++ E P TYN L+K +C ++ A+ ++ M G P+
Sbjct: 138 --------------AYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPD 183
Query: 245 QITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYE 304
++S +I+ ++ A+E+ M + G+ PDV Y I ++ K+ K A+ L++
Sbjct: 184 VFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWD 243
Query: 305 E-MKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQK 346
++ ++PN T+N ++ SK G V CL I++ M++
Sbjct: 244 RLLEDSSVYPNVKTHNIMISGLSKCG---RVDDCLKIWERMKQ 283
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 85/344 (24%), Positives = 140/344 (40%), Gaps = 59/344 (17%)
Query: 11 TLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYS 70
+L +++IM++ ++ SYNIL+K G++D A +++ L D TY
Sbjct: 344 SLELWRIMEHKN-SVNIVSYNILIKGLLENGKIDEATMIWR----LMPAKGYAADKTTYG 398
Query: 71 TIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLA 130
I AL V ++ S+G +L+ A++S+I+ +E+A L +EM
Sbjct: 399 IFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKH 458
Query: 131 GCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTV 190
G E N+ H C N ++G G +S L + S
Sbjct: 459 GVELNS-------HVC------------------NALIG--GLIRDSRLGEASFFLREMG 491
Query: 191 PNGFSNSQILSFTERFPFTPTTSTYNTLLKACG----SDYYHAKALINEMKTVGLSPNQI 246
NG PT +YN L+ CG + A A + EM G P+
Sbjct: 492 KNGCR--------------PTVVSYNILI--CGLCKAGKFGEASAFVKEMLENGWKPDLK 535
Query: 247 TWSILIDICG--GTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYE 304
T+SIL+ CG ++ A+E+ +G++ DV+ + I A+T+
Sbjct: 536 TYSILL--CGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMA 593
Query: 305 EMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAG 348
M+ N VTYNTL++ K G + + I+ M K G
Sbjct: 594 NMEHRNCTANLVTYNTLMEGFFKVG---DSNRATVIWGYMYKMG 634
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 71/313 (22%), Positives = 125/313 (39%), Gaps = 47/313 (15%)
Query: 14 IYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTII 73
I+++M G D T+Y I + CV G V+ A + +E+ ES G LDV+ Y++II
Sbjct: 381 IWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEV---ESSGG-HLDVYAYASII 436
Query: 74 KVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCE 133
K + A + +M GV LN+ ++LI + +A EM GC
Sbjct: 437 DCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCR 496
Query: 134 PNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNG 193
P +NI++ +A G FGE S + NG
Sbjct: 497 PTVVSYNILICGLCKA-------------------GKFGEA--------SAFVKEMLENG 529
Query: 194 FSNSQILSFTERFPFTPTTSTYNTLLKACGSDYY--HAKALINEMKTVGLSPNQITWSIL 251
+ P TY+ LL D A L ++ GL + + +IL
Sbjct: 530 WK--------------PDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNIL 575
Query: 252 IDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEI 311
I ++ A+ ++ +M +++ Y T ++ + + +A ++ M +
Sbjct: 576 IHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGL 635
Query: 312 HPNWVTYNTLLKA 324
P+ ++YNT++K
Sbjct: 636 QPDIISYNTIMKG 648
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 73/340 (21%), Positives = 139/340 (40%), Gaps = 47/340 (13%)
Query: 11 TLNIYQIMQNL-GLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTY 69
L++++ M+ + G +P + SYN LL A A + + ++ + E+ G + ++ TY
Sbjct: 97 ALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFA---YFETAG-VAPNLQTY 152
Query: 70 STIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLL 129
+ +IK+ K ++ A M G + ++S++IN A AG ++ A++LF+EM
Sbjct: 153 NVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSE 212
Query: 130 AGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATT 189
G P+ C+NI++ ++ + A +
Sbjct: 213 RGVAPDVTCYNILIDGFLKEKDHKTAMELW------------------------------ 242
Query: 190 VPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKALINEMKTVGLSPNQITWS 249
++L + +P T + + L CG + MK + T+S
Sbjct: 243 -------DRLLEDSSVYPNVKTHNIMISGLSKCGR-VDDCLKIWERMKQNEREKDLYTYS 294
Query: 250 ILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSC 309
LI NV+ A + + + DV+ Y T + K++L L+ M+
Sbjct: 295 SLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEH- 353
Query: 310 EIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGY 349
+ N V+YN L+K + G + E I++ M GY
Sbjct: 354 KNSVNIVSYNILIKGLLENGKIDEATM---IWRLMPAKGY 390
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/290 (21%), Positives = 126/290 (43%), Gaps = 21/290 (7%)
Query: 71 TIIKVFADAKLWQMALKVKHDMRSA-GVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLL 129
++IK + + AL V MR G ++++L+NA A + LF
Sbjct: 83 SVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFET 142
Query: 130 AGCEPNTQCFNIILHACVEACQYDRAFRFFHSW---KGNKM-LGSFGEGYNSNLKQGSIH 185
AG PN Q +N+++ + ++++A R F W +G K + S+ N K G +
Sbjct: 143 AGVAPNLQTYNVLIKMSCKKKEFEKA-RGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLD 201
Query: 186 NATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKAL---INEMKTVGLS 242
+A + + S + P + YN L+ + H A+ ++ +
Sbjct: 202 DALELFDEMSERGV---------APDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVY 252
Query: 243 PNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTL 302
PN T +I+I V+ ++I + M + D+ Y++ I ++ N +A ++
Sbjct: 253 PNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESV 312
Query: 303 YEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYVRL 352
+ E+ + + VTYNT+L + G ++++ L +++ M+ V +
Sbjct: 313 FNELDERKASIDVVTYNTMLGGFCRCG---KIKESLELWRIMEHKNSVNI 359
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 68/308 (22%), Positives = 143/308 (46%), Gaps = 12/308 (3%)
Query: 15 YQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIK 74
+ +M+ L P++ ++N LL A C + V AQ++++ ++ R D TYS +++
Sbjct: 191 FNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMR-----DRFTPDSKTYSILLE 245
Query: 75 VFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEP 134
+ A +V +M AG + + V +S +++ AG V++A+ + M + C+P
Sbjct: 246 GWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKP 305
Query: 135 NTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGF 194
T +++++H + + A F + + M +NS + G+ A + N +
Sbjct: 306 TTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVA-VFNSLI--GAFCKANRMKNVY 362
Query: 195 SNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKALINEMKTVGL-SPNQITWSILID 253
++L + TP + + N +L+ +A K + + P+ T++++I
Sbjct: 363 ---RVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIKVCEPDADTYTMVIK 419
Query: 254 ICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHP 313
+ + +E A ++ K M G+ P + ++ I E + ++A L EEM I P
Sbjct: 420 MFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRP 479
Query: 314 NWVTYNTL 321
+ VT+ L
Sbjct: 480 SGVTFGRL 487
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 108/247 (43%), Gaps = 13/247 (5%)
Query: 7 DLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDV 66
+L +++ M + G PD+ +Y+I++ C AGRVD A + + + K
Sbjct: 252 NLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSM----DPSICKPTT 307
Query: 67 FTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEE 126
F YS ++ + + A+ +M +G+ + ++SLI A A ++ ++ +E
Sbjct: 308 FIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKE 367
Query: 127 MLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHN 186
M G PN++ NIIL +E + D AF F K K+ + Y +K
Sbjct: 368 MKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFR--KMIKVCEPDADTYTMVIKMFCEKK 425
Query: 187 ATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKA--LINEMKTVGLSPN 244
+ ++ + + P+ T++ L+ + KA L+ EM +G+ P+
Sbjct: 426 EMETAD-----KVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPS 480
Query: 245 QITWSIL 251
+T+ L
Sbjct: 481 GVTFGRL 487
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/285 (21%), Positives = 113/285 (39%), Gaps = 48/285 (16%)
Query: 66 VFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFE 125
V Y +I+ A + +++ + + MR + LN + ++ A A V++AI F
Sbjct: 134 VRAYHMMIESTAKIRQYKLMWDLINAMRKKKM-LNVETFCIVMRKYARAQKVDEAIYAFN 192
Query: 126 EMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIH 185
M PN FN +L A ++ +A F + +
Sbjct: 193 VMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDR-------------------- 232
Query: 186 NATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSD--YYHAKALINEMKTVGLSP 243
FTP + TY+ LL+ G + A+ + EM G P
Sbjct: 233 ----------------------FTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHP 270
Query: 244 NQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLY 303
+ +T+SI++DI V+ A+ I++SM + KP Y+ + ++A+ +
Sbjct: 271 DIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTF 330
Query: 304 EEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAG 348
EM+ + + +N+L+ A K + V + L ++M+ G
Sbjct: 331 LEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVL---KEMKSKG 372
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 82/339 (24%), Positives = 153/339 (45%), Gaps = 30/339 (8%)
Query: 18 MQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFA 77
M++ G+ P++ SYN ++ C +DLA+ ++ + LE LK + +TYS +I
Sbjct: 469 MESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNI--LEK--GLKPNNYTYSILIDGCF 524
Query: 78 DAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQ 137
Q AL+V + M S+ + +N V + ++IN G +A +L M+ E
Sbjct: 525 RNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMI----EEKRL 580
Query: 138 C-----FNIILHACVEACQYDRAFRFFHSWKGNKM---LGSFGEGYNSNLKQGSIHNATT 189
C +N I+ + + D A + GN + + ++ N K + A
Sbjct: 581 CVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALE 640
Query: 190 VPNGFSNSQILSFTERFPFTPTTSTYNTLLKA-CG-SDYYHAKALINEMKTVGLSPNQIT 247
+ + N + Y L+ C S+ A AL +E+ GL+P+Q
Sbjct: 641 MRDEMKNKGV---------KLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPI 691
Query: 248 WSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMK 307
++ LI N+ A+++ K M G++ D+ YTT I ++ N A LY EM+
Sbjct: 692 YNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQ 751
Query: 308 SCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQK 346
+ + P+ + Y ++ SK G ++V + ++++M+K
Sbjct: 752 AVGLVPDEIIYTVIVNGLSKKGQFVKV---VKMFEEMKK 787
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 75/329 (22%), Positives = 142/329 (43%), Gaps = 24/329 (7%)
Query: 19 QNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFAD 78
++ G + + ++N LL A + D A D+ ++ L+LDV + +
Sbjct: 155 KSFGFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQM--------LELDVIPFFPYVNRTLS 206
Query: 79 AKLWQMAL----KVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEP 134
A + + +L ++ M + GV+ + V L+ A +A+++ + G EP
Sbjct: 207 ALVQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEP 266
Query: 135 NTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNS----NLKQGSIHNATTV 190
++ +++ + AC + A K K+ E Y S ++KQG++ +A +
Sbjct: 267 DSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRL 326
Query: 191 PNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKALINEMKTVGLSPNQITWSI 250
+ ++LS TS K +D A L ++M+ G SPN +T+S+
Sbjct: 327 KD-----EMLSDGISMNVVAATSLITGHCK--NNDLVSALVLFDKMEKEGPSPNSVTFSV 379
Query: 251 LIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCE 310
LI+ +E A+E K M G+ P V T I+ ++ + ++AL L++E
Sbjct: 380 LIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETG 439
Query: 311 IHPNWVTYNTLLKARSKYGSVLEVQQCLA 339
+ N NT+L K G E + L+
Sbjct: 440 L-ANVFVCNTILSWLCKQGKTDEATELLS 467
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 83/379 (21%), Positives = 157/379 (41%), Gaps = 50/379 (13%)
Query: 7 DLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDV 66
DL L ++ M+ G P+ ++++L++ G ++ A + YK+++ L L V
Sbjct: 354 DLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVL----GLTPSV 409
Query: 67 FTYSTIIKVFADAKLWQMALKV--------------------------KHD--------M 92
F TII+ + + + ALK+ K D M
Sbjct: 410 FHVHTIIQGWLKGQKHEEALKLFDESFETGLANVFVCNTILSWLCKQGKTDEATELLSKM 469
Query: 93 RSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQY 152
S G+ N V++++++ ++ A +F +L G +PN ++I++ C
Sbjct: 470 ESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDE 529
Query: 153 DRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILS-FTERFPFTPT 211
A N M S E N + Q I+ V ++L+ E +
Sbjct: 530 QNALEVV-----NHMTSSNIE-VNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVS 583
Query: 212 TSTYNTLLKAC--GSDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILK 269
+YN+++ + A A EM G+SPN IT++ L++ ++ A+E+
Sbjct: 584 CMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRD 643
Query: 270 SMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYG 329
M + G+K D+ AY I + N + A L+ E+ ++P+ YN+L+ G
Sbjct: 644 EMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLG 703
Query: 330 SVLEVQQCLAIYQDMQKAG 348
+++ L +Y+ M K G
Sbjct: 704 NMV---AALDLYKKMLKDG 719
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 117/266 (43%), Gaps = 14/266 (5%)
Query: 87 KVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHAC 146
K+ +S G +N+ A++ L+NA + + A+ + +ML P N L A
Sbjct: 149 KLVDSAKSFGFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSAL 208
Query: 147 VEACQYDRAFRFFHSWKGNKMLGSFGEGYNSN-LKQGSIHNATTVPNGFSNSQILSFTER 205
V+ A + +G G+ + L + S+ ++LS
Sbjct: 209 VQRNSLTEAKELYSRMVA---IGVDGDNVTTQLLMRASLREEKPA----EALEVLSRAIE 261
Query: 206 FPFTPTTSTYNTLLKACGS--DYYHAKALINEMKTVGL-SPNQITWSILIDICGGTENVE 262
P + Y+ ++AC D A +L+ EMK L P+Q T++ +I N++
Sbjct: 262 RGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMD 321
Query: 263 GAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLL 322
AI + M GI +V+A T+ I ++ + AL L+++M+ PN VT++ L+
Sbjct: 322 DAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLI 381
Query: 323 KARSKYGSVLEVQQCLAIYQDMQKAG 348
+ K G E+++ L Y+ M+ G
Sbjct: 382 EWFRKNG---EMEKALEFYKKMEVLG 404
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 76/152 (50%), Gaps = 4/152 (2%)
Query: 4 NSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLK 63
N ++ L++Y+ M GL+ D+ +Y L+ G + LA ++Y E+ ++VG L
Sbjct: 701 NLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEM---QAVG-LV 756
Query: 64 LDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQL 123
D Y+ I+ + + +K+ +M+ V N + ++++I G +++A +L
Sbjct: 757 PDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRL 816
Query: 124 FEEMLLAGCEPNTQCFNIILHACVEACQYDRA 155
+EML G P+ F+I++ V Q RA
Sbjct: 817 HDEMLDKGILPDGATFDILVSGQVGNLQPVRA 848
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 66/138 (47%), Gaps = 6/138 (4%)
Query: 22 GLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIK-VFADAK 80
GL P YN L+ G + A D+YK++ L+ D+ TY+T+I + D
Sbjct: 684 GLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLK----DGLRCDLGTYTTLIDGLLKDGN 739
Query: 81 LWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFN 140
L +A ++ +M++ G+ + + ++ ++N + G + +++FEEM PN +N
Sbjct: 740 LI-LASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYN 798
Query: 141 IILHACVEACQYDRAFRF 158
++ D AFR
Sbjct: 799 AVIAGHYREGNLDEAFRL 816
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 122/261 (46%), Gaps = 17/261 (6%)
Query: 92 MRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQ 151
M + + + V +++++ G A LF EM G PN +N ++ + + +
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60
Query: 152 Y---DRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPF 208
+ D+ R + N + +F N+ +K+ + A +I R+
Sbjct: 61 WSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEA---------EEIYKEMLRWSI 111
Query: 209 TPTTSTYNTLLKA-CGSDYYH-AKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIE 266
PTT TYN+++ C D AK +++ M + G SP+ +T+S LI+ + V+ +E
Sbjct: 112 FPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGME 171
Query: 267 ILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARS 326
I M GI + + YTT I + + A L EM SC + P+++T++ +L +
Sbjct: 172 IFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCML---A 228
Query: 327 KYGSVLEVQQCLAIYQDMQKA 347
S E+++ AI +D+QK+
Sbjct: 229 GLCSKKELRKAFAILEDLQKS 249
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 72/154 (46%), Gaps = 4/154 (2%)
Query: 3 VNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRL 62
V R ++ IY+ M + P +YN ++ C RVD A+ M L + S G
Sbjct: 91 VKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRM---LDSMASKG-C 146
Query: 63 KLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQ 122
DV T+ST+I + AK +++ +M G+ NTV +++LI+ G ++ A
Sbjct: 147 SPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQD 206
Query: 123 LFEEMLLAGCEPNTQCFNIILHACVEACQYDRAF 156
L EM+ G P+ F+ +L + +AF
Sbjct: 207 LLNEMISCGVAPDYITFHCMLAGLCSKKELRKAF 240
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 115/255 (45%), Gaps = 20/255 (7%)
Query: 23 LKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLW 82
+K D+ ++ C G AQ+++ E+ H + + +V TY+ +I F + W
Sbjct: 6 IKADVVISTAIVDRLCKDGNHINAQNLFTEM-HEKGIFP---NVLTYNCMIDSFCHSGRW 61
Query: 83 QMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNII 142
A ++ M +N + V +S+LINA V +A ++++EML P T +N +
Sbjct: 62 SDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSM 121
Query: 143 LHACVEACQYDRAFRFFHSW--KG-NKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQI 199
+ + + D A R S KG + + +F N K A V NG +I
Sbjct: 122 IDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCK------AKRVDNGM---EI 172
Query: 200 LSFTERFPFTPTTSTYNTLLKA-CG-SDYYHAKALINEMKTVGLSPNQITWS-ILIDICG 256
R T TY TL+ C D A+ L+NEM + G++P+ IT+ +L +C
Sbjct: 173 FCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCS 232
Query: 257 GTENVEGAIEILKSM 271
E + A IL+ +
Sbjct: 233 KKE-LRKAFAILEDL 246
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 134/314 (42%), Gaps = 54/314 (17%)
Query: 14 IYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTII 73
I++ M LG+ ++ YN+L+ AC +G + A+ K L +E G D+FTY+T+I
Sbjct: 190 IFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAE---KLLSEMEEKGVFP-DIFTYNTLI 245
Query: 74 KVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCE 133
V+ + AL V+ M +GV N V ++S I+ + G + +A +LF E +
Sbjct: 246 SVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFRE-IKDDVT 304
Query: 134 PNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNG 193
N + ++ D A R +++ S G
Sbjct: 305 ANHVTYTTLIDGYCRMNDIDEALRL------REVMESRG--------------------- 337
Query: 194 FSNSQILSFTERFPFTPTTSTYNTLLKACGSD--YYHAKALINEMKTVGLSPNQITWSIL 251
F+P TYN++L+ D A L+ EM + P+ IT + L
Sbjct: 338 --------------FSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTL 383
Query: 252 IDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIK---VCVESKNFKQALTLYEEMKS 308
I+ E++ A+++ K M ++G+K D+ +Y I +E +N K+ L M
Sbjct: 384 INAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELF---SMIE 440
Query: 309 CEIHPNWVTYNTLL 322
P + TY+ L+
Sbjct: 441 KGFSPGYATYSWLV 454
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 131/288 (45%), Gaps = 22/288 (7%)
Query: 68 TYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEM 127
+S ++ +A A + ++ V +RS G+ + A + L+N+ L + ++F++M
Sbjct: 135 VFSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKM 194
Query: 128 LLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGE--GYNSNLK---QG 182
+ G N +N+++HAC ++ ++A + + G F + YN+ + +
Sbjct: 195 VKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEK---GVFPDIFTYNTLISVYCKK 251
Query: 183 SIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSD--YYHAKALINEMKTVG 240
S+H F + ER P TYN+ + + A L E+K
Sbjct: 252 SMH--------FEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKD-D 302
Query: 241 LSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQAL 300
++ N +T++ LID +++ A+ + + M G P V+ Y + ++ E ++A
Sbjct: 303 VTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREAN 362
Query: 301 TLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAG 348
L EM +I P+ +T NTL+ A Y + ++ + + + M ++G
Sbjct: 363 RLLTEMSGKKIEPDNITCNTLINA---YCKIEDMVSAVKVKKKMIESG 407
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 64/120 (53%), Gaps = 2/120 (1%)
Query: 232 LINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKV-C 290
+ +M +G+ N +++L+ C + + E A ++L M + G+ PD+ Y T I V C
Sbjct: 190 IFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYC 249
Query: 291 VESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYV 350
+S +F +AL++ + M+ + PN VTYN+ + S+ G + E + +D A +V
Sbjct: 250 KKSMHF-EALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKDDVTANHV 308
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/317 (20%), Positives = 132/317 (41%), Gaps = 23/317 (7%)
Query: 12 LNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYST 71
L++ M+ G+ P++ +YN + GR+ A +++E+K + + TY+T
Sbjct: 258 LSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKDDVTANHV-----TYTT 312
Query: 72 IIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAG 131
+I + AL+++ M S G + V ++S++ G + +A +L EM
Sbjct: 313 LIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKK 372
Query: 132 CEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVP 191
EP+ N +++A Y + + K K + G + + IH V
Sbjct: 373 IEPDNITCNTLINA------YCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVL 426
Query: 192 N-GFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAK------ALINEMKTVGLSPN 244
+ ++ S E+ F+P +TY+ L+ +Y+ L+ E + GL +
Sbjct: 427 ELENAKEELFSMIEK-GFSPGYATYSWLVDG----FYNQNKQDEITKLLEEFEKRGLCAD 481
Query: 245 QITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYE 304
+ LI E V+ A + +SM G+ D + +TT + +A L++
Sbjct: 482 VALYRGLIRRICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGKVTEASALFD 541
Query: 305 EMKSCEIHPNWVTYNTL 321
M + + N Y ++
Sbjct: 542 VMYNRRLMVNLKLYKSI 558
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 63/128 (49%), Gaps = 4/128 (3%)
Query: 7 DLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDV 66
D+ L + ++M++ G P + +YN +L+ C GR+ A + E+ S +++ D
Sbjct: 322 DIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEM----SGKKIEPDN 377
Query: 67 FTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEE 126
T +T+I + + A+KVK M +G+ L+ ++ +LI+ +E A +
Sbjct: 378 ITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFS 437
Query: 127 MLLAGCEP 134
M+ G P
Sbjct: 438 MIEKGFSP 445
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 80/338 (23%), Positives = 137/338 (40%), Gaps = 47/338 (13%)
Query: 8 LTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVF 67
L+ ++ + M+ G+ PD +YNILL AG ++ A + Y++++ VG L D
Sbjct: 356 LSEAESLLKKMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIR---KVG-LFPDTV 411
Query: 68 TYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEM 127
T+ ++ + K+ V +M + ++ + ++ + GLV QA LFE
Sbjct: 412 THRAVLHILCQRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERF 471
Query: 128 LLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNA 187
L C ++ ++ E + A F+ G + +
Sbjct: 472 QL-DCVLSSTTLAAVIDVYAEKGLWVEAETVFY---GKRNM------------------- 508
Query: 188 TTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKA--LINEMKTVGLSPNQ 245
+G N + YN ++KA G H KA L MK G P++
Sbjct: 509 ----SGQRNDVL--------------EYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDE 550
Query: 246 ITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEE 305
T++ L + G + V+ A IL M D+G KP Y I V A+ LYE
Sbjct: 551 CTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEA 610
Query: 306 MKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQD 343
M+ + PN V Y +L+ ++ G V E Q + ++
Sbjct: 611 MEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEE 648
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 122/293 (41%), Gaps = 20/293 (6%)
Query: 65 DVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLF 124
+V Y+ +++ A W +M GV + L++ AGLV++A+
Sbjct: 144 NVIHYNIVLRALGRAGKWDELRLCWIEMAHNGVLPTNNTYGMLVDVYGKAGLVKEALLWI 203
Query: 125 EEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSI 184
+ M P+ ++ + ++DRA RFF W K+ + + K GS
Sbjct: 204 KHMGQRMHFPDEVTMATVVRVFKNSGEFDRADRFFKGWCAGKVDLDL-DSIDDFPKNGSA 262
Query: 185 HNATTVPNGFSNSQILSFTERFPFTPT----------------TSTYNTLLKACG--SDY 226
+ + F + ++ R P + TST+NTL+ G
Sbjct: 263 QSPVNLKQ-FLSMELFKVGARNPIEKSLHFASGSDSSPRKPRLTSTFNTLIDLYGKAGRL 321
Query: 227 YHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTA 286
A L +EM G+ + +T++ +I CG ++ A +LK M + GI PD Y
Sbjct: 322 NDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEEKGISPDTKTYNIL 381
Query: 287 IKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLA 339
+ + ++ + + AL Y +++ + P+ VT+ +L + V EV+ +A
Sbjct: 382 LSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVAEVEAVIA 434
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 82/380 (21%), Positives = 151/380 (39%), Gaps = 75/380 (19%)
Query: 1 MNVNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKEL------- 53
++ ++ D+ L Y+ ++ +GL PD ++ +L C V + + E+
Sbjct: 384 LHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVAEVEAVIAEMDRNSIRI 443
Query: 54 -KHLESV------------------GRLKLDVFTYST----IIKVFADAKLWQMALKVKH 90
+H V R +LD ST +I V+A+ LW A V +
Sbjct: 444 DEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSSTTLAAVIDVYAEKGLWVEAETVFY 503
Query: 91 DMRS-AGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEA 149
R+ +G + + ++ +I A A L E+A+ LF+ M G P+ +N +
Sbjct: 504 GKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGV 563
Query: 150 CQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFT 209
D A R E +S K G A +
Sbjct: 564 DLVDEAQRI------------LAEMLDSGCKPGCKTYAAMI------------------- 592
Query: 210 PTTSTYNTL-LKACGSDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEIL 268
++Y L L + D Y A M+ G+ PN++ + LI+ + VE AI+
Sbjct: 593 ---ASYVRLGLLSDAVDLYEA------MEKTGVKPNEVVYGSLINGFAESGMVEEAIQYF 643
Query: 269 KSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKY 328
+ M + G++ + I T+ IK + ++A +Y++MK E P+ N++L +
Sbjct: 644 RMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADL 703
Query: 329 GSVLEVQQCLAIYQDMQKAG 348
G V E + +I+ +++ G
Sbjct: 704 GIVSEAE---SIFNALREKG 720
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/287 (20%), Positives = 122/287 (42%), Gaps = 22/287 (7%)
Query: 65 DVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLF 124
DV Y+ +IK + AKL + AL + M++ G + ++SL A LV++A ++
Sbjct: 514 DVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRIL 573
Query: 125 EEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSW-----KGNKMLGSFGEGYNSNL 179
EML +GC+P + + ++ + V A + + K N+++ +G N
Sbjct: 574 AEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVV--YGSLINGFA 631
Query: 180 KQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSD--YYHAKALINEMK 237
+ G + A Q E +L+KA A+ + ++MK
Sbjct: 632 ESGMVEEAI---------QYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMK 682
Query: 238 TVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFK 297
P+ + ++ +C V A I ++ + G DVI++ T + +
Sbjct: 683 DSEGGPDVAASNSMLSLCADLGIVSEAESIFNALREKGT-CDVISFATMMYLYKGMGMLD 741
Query: 298 QALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDM 344
+A+ + EEM+ + + ++N ++ Y + ++ +C ++ +M
Sbjct: 742 EAIEVAEEMRESGLLSDCTSFNQVMAC---YAADGQLSECCELFHEM 785
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 134/316 (42%), Gaps = 23/316 (7%)
Query: 11 TLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYS 70
L ++ +++ + D YN+ A GRV+ A ++ +E+K V DV Y+
Sbjct: 372 ALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVP----DVINYT 427
Query: 71 TIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLA 130
T+I + AL + +M G++ + + ++ L++ A G E+ ++++E M
Sbjct: 428 TLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAE 487
Query: 131 GCEPNTQCFNIILHACVEACQYDRAFRFFHSW--KGNKMLGSFGEGYNSNLKQGSIHNAT 188
G +PN ++I+ A + A FF S K + SF +GY
Sbjct: 488 GPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQKCPENKASFVKGY------------- 534
Query: 189 TVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKA--LINEMKTVGLSPNQI 246
G S +F R + S Y L + + Y KA ++ +M + P +
Sbjct: 535 -CEAGLSKKAYKAFV-RLEYPLRKSVYIKLFFSLCIEGYLEKAHDVLKKMSAYRVEPGRS 592
Query: 247 TWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEM 306
+I NV A + +M + G+ PD+ YT I ++A +L+E+M
Sbjct: 593 MCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDM 652
Query: 307 KSCEIHPNWVTYNTLL 322
K I P+ VTY LL
Sbjct: 653 KQRGIKPDVVTYTVLL 668
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 88/368 (23%), Positives = 153/368 (41%), Gaps = 61/368 (16%)
Query: 11 TLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGR-LKLDVFTY 69
+ Q M++ G+ PD+ +Y L+ C+ G+V A D+ E+ +G + D+ TY
Sbjct: 407 AFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEM-----IGNGMSPDLITY 461
Query: 70 STIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLL 129
+ ++ A + L++ M++ G N V S +I A V++A F L
Sbjct: 462 NVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSS-LE 520
Query: 130 AGCEPNTQCFNIILHACVEACQYDRAFRFF----HSWKGNKMLGSFG----EGY----NS 177
C N F + EA +A++ F + + + + F EGY +
Sbjct: 521 QKCPENKASF---VKGYCEAGLSKKAYKAFVRLEYPLRKSVYIKLFFSLCIEGYLEKAHD 577
Query: 178 NLKQ-------------GSIHNATTVPNGFSNSQIL--SFTER------FPFTPTTSTYN 216
LK+ G + A N +Q+L + ER F +T TY
Sbjct: 578 VLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYC 637
Query: 217 TLLKACGSDYYHAKALINEMKTVGLSPNQITWSILID-----------ICG--GTENVEG 263
L ++ A++L +MK G+ P+ +T+++L+D C G
Sbjct: 638 RL-----NELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHETCSVQGEVGKRK 692
Query: 264 AIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLK 323
A E+L+ AGI DV+ YT I + N +QA L++ M + P+ V Y TL+
Sbjct: 693 ASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEPDMVAYTTLIS 752
Query: 324 ARSKYGSV 331
+ + G +
Sbjct: 753 SYFRKGYI 760
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 61/115 (53%), Gaps = 5/115 (4%)
Query: 235 EMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIK-VCVES 293
E + + + +++ +++ D VE A E+L+ M D GI PDVI YTT I C++
Sbjct: 378 EFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQG 437
Query: 294 KNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAG 348
K AL L +EM + P+ +TYN L+ ++ G EV L IY+ M+ G
Sbjct: 438 K-VVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEV---LEIYERMKAEG 488
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 129/274 (47%), Gaps = 20/274 (7%)
Query: 12 LNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYST 71
L Y+ M+ + P+ + N+++ C +G++D ++ L+ +E +G DV +Y+T
Sbjct: 223 LRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIEL---LQDMERLGFRATDV-SYNT 278
Query: 72 IIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAG 131
+I + L ALK+K+ M +G+ N V +++LI+ A +++A ++F EM
Sbjct: 279 LIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVN 338
Query: 132 CEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNL----KQGSIHNA 187
PNT +N +++ + ++ AFRF+ N + YN+ + KQ A
Sbjct: 339 VAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDI-LTYNALIFGLCKQAKTRKA 397
Query: 188 TTVPNGFSNSQILSFTERFPFTPTTSTYNTLL--KACGSDYYHAKALINEMKTVGLSPNQ 245
+Q + ++ P +ST++ L+ + + L M G PN+
Sbjct: 398 ---------AQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNE 448
Query: 246 ITWSILIDICGGTENVEGAIEILKSMGDAGIKPD 279
T+++L+ E+ +GA ++L+ M I D
Sbjct: 449 QTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLD 482
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/327 (20%), Positives = 138/327 (42%), Gaps = 36/327 (11%)
Query: 9 TYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKEL----KHLESVGRLKL 64
T+ + ++ + +N K S +L+ V G VDL ++ L + +S R+
Sbjct: 117 THAIVLHTLTKNRKFK----SAESILRDVLVNGGVDLPAKVFDALLYSYRECDSTPRV-- 170
Query: 65 DVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLF 124
+ ++ K FA K ++ A M+ G + ++ +++ G V+ A++ +
Sbjct: 171 ----FDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFY 226
Query: 125 EEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLG------SFGEGYNSN 178
EM PN N+++ + + D+ + LG S+ +
Sbjct: 227 REMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDME---RLGFRATDVSYNTLIAGH 283
Query: 179 LKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKA-CGS-DYYHAKALINEM 236
++G + +A + N S + P T+NTL+ C + A + EM
Sbjct: 284 CEKGLLSSALKLKNMMGKSGL---------QPNVVTFNTLIHGFCRAMKLQEASKVFGEM 334
Query: 237 KTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAI-KVCVESKN 295
K V ++PN +T++ LI+ + E A + M GI+ D++ Y I +C ++K
Sbjct: 335 KAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKT 394
Query: 296 FKQALTLYEEMKSCEIHPNWVTYNTLL 322
++A +E+ + PN T++ L+
Sbjct: 395 -RKAAQFVKELDKENLVPNSSTFSALI 420
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 94/243 (38%), Gaps = 46/243 (18%)
Query: 104 WSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWK 163
+ SL AH A F +M G P + N + + + + D A RF+ +
Sbjct: 171 FDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMR 230
Query: 164 GNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACG 223
K+ + Y N+ + + G ++L ER F T +YNTL
Sbjct: 231 RCKISPN---PYTLNMVMSGYCRSGKLDKGI---ELLQDMERLGFRATDVSYNTL----- 279
Query: 224 SDYYHAKALINEMKTVGLSPNQITWSILIDICGGTEN--VEGAIEILKSMGDAGIKPDVI 281
I G E + A+++ MG +G++P+V+
Sbjct: 280 ------------------------------IAGHCEKGLLSSALKLKNMMGKSGLQPNVV 309
Query: 282 AYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIY 341
+ T I + ++A ++ EMK+ + PN VTYNTL+ S+ G + + Y
Sbjct: 310 TFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQG---DHEMAFRFY 366
Query: 342 QDM 344
+DM
Sbjct: 367 EDM 369
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 74/155 (47%), Gaps = 6/155 (3%)
Query: 8 LTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVF 67
L+ L + +M GL+P++ ++N L+ C A ++ A ++ E+K + + +
Sbjct: 289 LSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVN----VAPNTV 344
Query: 68 TYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEM 127
TY+T+I ++ +MA + DM G+ + + +++LI +A Q +E+
Sbjct: 345 TYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKEL 404
Query: 128 LLAGCEPNTQCFN-IILHACVEACQYDRAFRFFHS 161
PN+ F+ +I+ CV DR F + S
Sbjct: 405 DKENLVPNSSTFSALIMGQCVRK-NADRGFELYKS 438
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 129/274 (47%), Gaps = 20/274 (7%)
Query: 12 LNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYST 71
L Y+ M+ + P+ + N+++ C +G++D ++ L+ +E +G DV +Y+T
Sbjct: 223 LRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIEL---LQDMERLGFRATDV-SYNT 278
Query: 72 IIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAG 131
+I + L ALK+K+ M +G+ N V +++LI+ A +++A ++F EM
Sbjct: 279 LIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVN 338
Query: 132 CEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNL----KQGSIHNA 187
PNT +N +++ + ++ AFRF+ N + YN+ + KQ A
Sbjct: 339 VAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDI-LTYNALIFGLCKQAKTRKA 397
Query: 188 TTVPNGFSNSQILSFTERFPFTPTTSTYNTLL--KACGSDYYHAKALINEMKTVGLSPNQ 245
+Q + ++ P +ST++ L+ + + L M G PN+
Sbjct: 398 ---------AQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNE 448
Query: 246 ITWSILIDICGGTENVEGAIEILKSMGDAGIKPD 279
T+++L+ E+ +GA ++L+ M I D
Sbjct: 449 QTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLD 482
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/327 (20%), Positives = 138/327 (42%), Gaps = 36/327 (11%)
Query: 9 TYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKEL----KHLESVGRLKL 64
T+ + ++ + +N K S +L+ V G VDL ++ L + +S R+
Sbjct: 117 THAIVLHTLTKNRKFK----SAESILRDVLVNGGVDLPAKVFDALLYSYRECDSTPRV-- 170
Query: 65 DVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLF 124
+ ++ K FA K ++ A M+ G + ++ +++ G V+ A++ +
Sbjct: 171 ----FDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFY 226
Query: 125 EEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLG------SFGEGYNSN 178
EM PN N+++ + + D+ + LG S+ +
Sbjct: 227 REMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDME---RLGFRATDVSYNTLIAGH 283
Query: 179 LKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKA-CGS-DYYHAKALINEM 236
++G + +A + N S + P T+NTL+ C + A + EM
Sbjct: 284 CEKGLLSSALKLKNMMGKSGL---------QPNVVTFNTLIHGFCRAMKLQEASKVFGEM 334
Query: 237 KTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAI-KVCVESKN 295
K V ++PN +T++ LI+ + E A + M GI+ D++ Y I +C ++K
Sbjct: 335 KAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKT 394
Query: 296 FKQALTLYEEMKSCEIHPNWVTYNTLL 322
++A +E+ + PN T++ L+
Sbjct: 395 -RKAAQFVKELDKENLVPNSSTFSALI 420
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 94/243 (38%), Gaps = 46/243 (18%)
Query: 104 WSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWK 163
+ SL AH A F +M G P + N + + + + D A RF+ +
Sbjct: 171 FDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMR 230
Query: 164 GNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACG 223
K+ + Y N+ + + G ++L ER F T +YNTL
Sbjct: 231 RCKISPN---PYTLNMVMSGYCRSGKLDKGI---ELLQDMERLGFRATDVSYNTL----- 279
Query: 224 SDYYHAKALINEMKTVGLSPNQITWSILIDICGGTEN--VEGAIEILKSMGDAGIKPDVI 281
I G E + A+++ MG +G++P+V+
Sbjct: 280 ------------------------------IAGHCEKGLLSSALKLKNMMGKSGLQPNVV 309
Query: 282 AYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIY 341
+ T I + ++A ++ EMK+ + PN VTYNTL+ S+ G + + Y
Sbjct: 310 TFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQG---DHEMAFRFY 366
Query: 342 QDM 344
+DM
Sbjct: 367 EDM 369
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 74/155 (47%), Gaps = 6/155 (3%)
Query: 8 LTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVF 67
L+ L + +M GL+P++ ++N L+ C A ++ A ++ E+K + + +
Sbjct: 289 LSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVN----VAPNTV 344
Query: 68 TYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEM 127
TY+T+I ++ +MA + DM G+ + + +++LI +A Q +E+
Sbjct: 345 TYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKEL 404
Query: 128 LLAGCEPNTQCFN-IILHACVEACQYDRAFRFFHS 161
PN+ F+ +I+ CV DR F + S
Sbjct: 405 DKENLVPNSSTFSALIMGQCVRK-NADRGFELYKS 438
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 144/328 (43%), Gaps = 52/328 (15%)
Query: 14 IYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTII 73
+ +M N GL+PD + +I +++ C GRVD A+D+ KEL S D +TY+ ++
Sbjct: 146 VLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPP----DTYTYNFLL 201
Query: 74 KVFADAKLWQMALKVKHDMRSA-GVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGC 132
K K + + +MR V + V+++ LI+ ++ + +A+ L ++ AG
Sbjct: 202 KHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGF 261
Query: 133 EPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPN 192
+P+ +N I+ F KG++ +G + + +K+ +
Sbjct: 262 KPDCFLYNTIMKG------------FCTLSKGSEAVGVYKK-----MKEEGVE------- 297
Query: 193 GFSNSQILSFTERFPFTPTTSTYNTL---LKACGSDYYHAKALINEMKTVGLSPNQITWS 249
P TYNTL L G A+ + M G P+ T++
Sbjct: 298 -----------------PDQITYNTLIFGLSKAGR-VEEARMYLKTMVDAGYEPDTATYT 339
Query: 250 ILID-ICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKS 308
L++ +C E++ GA+ +L+ M G P+ Y T + +++ + + LYE MKS
Sbjct: 340 SLMNGMCRKGESL-GALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKS 398
Query: 309 CEIHPNWVTYNTLLKARSKYGSVLEVQQ 336
+ Y TL+++ K G V E +
Sbjct: 399 SGVKLESNGYATLVRSLVKSGKVAEAYE 426
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 81/145 (55%), Gaps = 10/145 (6%)
Query: 210 PTTSTYNTLLK---ACGSDYYHAKALINEMKT-VGLSPNQITWSILIDICGGTENVEGAI 265
P T TYN LLK C D + ++EM+ + P+ ++++ILID ++N+ A+
Sbjct: 192 PDTYTYNFLLKHLCKC-KDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAM 250
Query: 266 EILKSMGDAGIKPDVIAYTTAIK-VCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKA 324
++ +G+AG KPD Y T +K C SK +A+ +Y++MK + P+ +TYNTL+
Sbjct: 251 YLVSKLGNAGFKPDCFLYNTIMKGFCTLSKG-SEAVGVYKKMKEEGVEPDQITYNTLIFG 309
Query: 325 RSKYGSVLEVQQCLAIYQDMQKAGY 349
SK G V E + L + M AGY
Sbjct: 310 LSKAGRVEEARMYL---KTMVDAGY 331
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 75/162 (46%), Gaps = 4/162 (2%)
Query: 4 NSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLK 63
NS++L + + + N G KPD YN ++K C + A +YK++K E V +
Sbjct: 242 NSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKE-EGV---E 297
Query: 64 LDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQL 123
D TY+T+I + A + A M AG +T ++SL+N G A+ L
Sbjct: 298 PDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSL 357
Query: 124 FEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGN 165
EEM GC PN +N +LH +A D+ + K +
Sbjct: 358 LEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSS 399
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 112/263 (42%), Gaps = 18/263 (6%)
Query: 92 MRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQ 151
M + G+ + V + + G V++A L +E+ P+T +N +L +
Sbjct: 150 MVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKD 209
Query: 152 YDRAFRFFHSWKGN----KMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFP 207
+ F + + L SF ++ ++ A + + N+
Sbjct: 210 LHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAG--------- 260
Query: 208 FTPTTSTYNTLLKA-CG-SDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAI 265
F P YNT++K C S A + +MK G+ P+QIT++ LI VE A
Sbjct: 261 FKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEAR 320
Query: 266 EILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKAR 325
LK+M DAG +PD YT+ + AL+L EEM++ PN TYNTLL
Sbjct: 321 MYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGL 380
Query: 326 SKYGSVLEVQQCLAIYQDMQKAG 348
K + + + +Y+ M+ +G
Sbjct: 381 CK---ARLMDKGMELYEMMKSSG 400
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 136/322 (42%), Gaps = 49/322 (15%)
Query: 15 YQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIK 74
+ M G+KP + + LL + C V+ AQ+ + + K V K TYS +++
Sbjct: 161 FNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAK----TYSILVR 216
Query: 75 VFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEP 134
+A + A KV +M ++ +A+++L++A +G V+ ++F+EM G +P
Sbjct: 217 GWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKP 276
Query: 135 NTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGF 194
+ F I +HA +A G +H+A
Sbjct: 277 DAYSFAIFIHAYCDA--------------------------------GDVHSAY------ 298
Query: 195 SNSQILSFTERFPFTPTTSTYNTLLKA-CGSDYY-HAKALINEMKTVGLSPNQITW-SIL 251
++L +R+ P T+N ++K C ++ A L++EM G +P+ T+ SI+
Sbjct: 299 ---KVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIM 355
Query: 252 IDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEI 311
C E V A ++L M PD Y +K+ + F +A ++E M +
Sbjct: 356 AYHCDHCE-VNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKF 414
Query: 312 HPNWVTYNTLLKARSKYGSVLE 333
+P TY ++ + LE
Sbjct: 415 YPTVATYTVMIHGLVRKKGKLE 436
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 92/218 (42%), Gaps = 18/218 (8%)
Query: 6 RDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLD 65
RD + ++ M D+ +YN LL A C +G VD M++E+ +L LK D
Sbjct: 222 RDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLG----LKPD 277
Query: 66 VFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFE 125
++++ I + DA A KV M+ + N ++ +I V+ A L +
Sbjct: 278 AYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLD 337
Query: 126 EMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQ---- 181
EM+ G P+T +N I+ + C+ +RA + K L YN LK
Sbjct: 338 EMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPD-RHTYNMVLKLLIRI 396
Query: 182 GSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLL 219
G AT + G S + F PT +TY ++
Sbjct: 397 GRFDRATEIWEGMSERK---------FYPTVATYTVMI 425
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 77/161 (47%), Gaps = 9/161 (5%)
Query: 5 SRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKL 64
S D+ ++Q M NLGLKPD S+ I + A C AG V A + +K + V
Sbjct: 256 SGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVP---- 311
Query: 65 DVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLIN-ACAHAGLVEQAIQL 123
+V+T++ IIK + A + +M G N +T ++S++ C H V +A +L
Sbjct: 312 NVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCE-VNRATKL 370
Query: 124 FEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKG 164
M C P+ +N++L + ++DRA W+G
Sbjct: 371 LSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEI---WEG 408
>AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:11238421-11240125 FORWARD
LENGTH=540
Length = 540
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 138/324 (42%), Gaps = 24/324 (7%)
Query: 11 TLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYS 70
T I+++M+ G +Y++L+ GR +LA D+Y E+ + ++ L
Sbjct: 233 TERIWRVMKGDGHIGTEITYSLLVSIFVRCGRSELALDVYDEMVN----NKISLREDAMY 288
Query: 71 TIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLA 130
+I + W +ALK+ M G+ N VA ++LIN+ AG V +++ +
Sbjct: 289 AMISACTKEEKWDLALKIFQSMLKKGMKPNLVACNTLINSLGKAGKVGLVFKVYSVLKSL 348
Query: 131 GCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNL----KQGSIHN 186
G +P+ +N +L A +A +Y+ + F + + YN+ + K G
Sbjct: 349 GHKPDEYTWNALLTALYKANRYEDVLQLFDMIRSENLCCLNEYLYNTAMVSCQKLGYWEK 408
Query: 187 ATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKALI--NEMKTVGLSPN 244
A ++L E T +TS+YN ++ AC AL+ M PN
Sbjct: 409 AV---------KLLYEMEGSGLTVSTSSYNLVISACEKSRKSKVALLVYEHMAQRDCKPN 459
Query: 245 QITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYE 304
T+ L+ C + +ILK ++PDV Y AI + FK A LY
Sbjct: 460 TFTYLSLVRSCIWGSLWDEVEDILKK-----VEPDVSLYNAAIHGMCLRREFKFAKELYV 514
Query: 305 EMKSCEIHPNWVTYNTLLKARSKY 328
+M+ + P+ T +L+ K+
Sbjct: 515 KMREMGLEPDGKTRAMMLQNLKKH 538
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 90/220 (40%), Gaps = 12/220 (5%)
Query: 117 VEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYN 176
V A++LF+ M G +PN N L + +AF F + + + G Y+
Sbjct: 123 VRSALELFDSMRFLGLQPNAHACNSFLSCLLRNGDIQKAFTVFEFMRKKENVT--GHTYS 180
Query: 177 SNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPT---TSTYNTLLKACG--SDYYHAKA 231
LK V S ++ ER P + YNT + CG ++ Y +
Sbjct: 181 LMLKA-----VAEVKGCESALRMFRELEREPKRRSCFDVVLYNTAISLCGRINNVYETER 235
Query: 232 LINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCV 291
+ MK G +IT+S+L+ I E A+++ M + I A I C
Sbjct: 236 IWRVMKGDGHIGTEITYSLLVSIFVRCGRSELALDVYDEMVNNKISLREDAMYAMISACT 295
Query: 292 ESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSV 331
+ + + AL +++ M + PN V NTL+ + K G V
Sbjct: 296 KEEKWDLALKIFQSMLKKGMKPNLVACNTLINSLGKAGKV 335
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/338 (22%), Positives = 142/338 (42%), Gaps = 52/338 (15%)
Query: 14 IYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTII 73
I ++M G PD +YN+++ C G + A + +++ S+ DV TY+T+I
Sbjct: 161 ILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDM----SLSGSPPDVITYNTVI 216
Query: 74 KVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLIN-ACAHAGLVEQAIQLFEEMLLAGC 132
+ D + A++ D G + ++ L+ C + G +AI++ E+M + GC
Sbjct: 217 RCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCG-SARAIEVLEDMAVEGC 275
Query: 133 EPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPN 192
P+ +N ++ N N ++G++ +V
Sbjct: 276 YPDIVTYNSLV--------------------------------NYNCRRGNLEEVASVI- 302
Query: 193 GFSNSQILSFTERFPFTPTTSTYNTLLKA-CGSDYY-HAKALINEMKTVGLSPNQITWSI 250
ILS T TYNTLL + C +Y+ + ++N M P IT++I
Sbjct: 303 ----QHILSHGLEL----NTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNI 354
Query: 251 LIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCE 310
LI+ + AI+ M + PD++ Y T + + A+ L +K+
Sbjct: 355 LINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTC 414
Query: 311 IHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAG 348
P +TYN+++ +K G +++ L +Y M AG
Sbjct: 415 CPPGLITYNSVIDGLAKKGL---MKKALELYHQMLDAG 449
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/282 (22%), Positives = 119/282 (42%), Gaps = 18/282 (6%)
Query: 12 LNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYST 71
+ + + M G PD+ +YN L+ C G + +++ ++H+ S G L+L+ TY+T
Sbjct: 264 IEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNL---EEVASVIQHILSHG-LELNTVTYNT 319
Query: 72 IIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAG 131
++ + W ++ + M + ++ LIN A L+ +AI F +ML
Sbjct: 320 LLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQK 379
Query: 132 CEPNTQCFNIILHACVEACQYDRAFRFFHSWKGN---KMLGSFGEGYNSNLKQGSIHNAT 188
C P+ +N +L A + D A K L ++ + K+G + A
Sbjct: 380 CLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKAL 439
Query: 189 TVPNGFSNSQILSFTERFPFTPTTSTYNTLLKA-CGSDYY-HAKALINEMKTVGLSPNQI 246
+ + ++ I P T +L+ C ++ A ++ E G
Sbjct: 440 ELYHQMLDAGIF---------PDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGS 490
Query: 247 TWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIK 288
T+ ++I + +E AIE+++ M G KPD YT +K
Sbjct: 491 TYRLVIQGLCKKKEIEMAIEVVEIMLTGGCKPDETIYTAIVK 532
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/348 (21%), Positives = 146/348 (41%), Gaps = 35/348 (10%)
Query: 14 IYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTII 73
++ M +G+ ++ ++N+L+ C+ G+++ A M L+ + S ++ D TY+TI+
Sbjct: 191 VFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGM---LERMVSEFKVNPDNVTYNTIL 247
Query: 74 KVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCE 133
K + ++ DM+ G+ N V +++L+ G +++A Q+ E M
Sbjct: 248 KAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVL 307
Query: 134 PNTQCFNIILHACVEACQYDRAFRFFHSWKGNKML-----------GSFGEGY------- 175
P+ +NI+++ A + K K+ G F G
Sbjct: 308 PDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKL 367
Query: 176 -----NSNLKQGSI-HNAT------TVPNGFSNSQILSFTERFPFTPTTSTYNTLLKAC- 222
N +K + HN + ++ + F+P TY+TL+KA
Sbjct: 368 MEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYL 427
Query: 223 -GSDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVI 281
D A ++ EM G+ N IT + ++D ++ A +L S G D +
Sbjct: 428 KVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEV 487
Query: 282 AYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYG 329
Y T I + ++AL +++EMK +I P T+N+L+ +G
Sbjct: 488 TYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHG 535
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 84/304 (27%), Positives = 137/304 (45%), Gaps = 39/304 (12%)
Query: 7 DLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDV 66
DL+ L + + M G+K + + N +L A C ++D A ++ L G + +D
Sbjct: 431 DLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNL---LNSAHKRGFI-VDE 486
Query: 67 FTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEE 126
TY T+I F + + AL++ +M+ + ++SLI H G E A++ F+E
Sbjct: 487 VTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDE 546
Query: 127 MLLAGCEPNTQCFN-IILHACVEACQYDRAFRFF-----HSWKGNKMLGSFGEGYNSNL- 179
+ +G P+ FN IIL C E + ++AF F+ HS+K + Y N+
Sbjct: 547 LAESGLLPDDSTFNSIILGYCKEG-RVEKAFEFYNESIKHSFKPD--------NYTCNIL 597
Query: 180 -----KQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKA--L 232
K+G A F N+ I ER T TYNT++ A D +A L
Sbjct: 598 LNGLCKEGMTEKAL----NFFNTLI---EER---EVDTVTYNTMISAFCKDKKLKEAYDL 647
Query: 233 INEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSM-GDAG-IKPDVIAYTTAIKVC 290
++EM+ GL P++ T++ I + + E+LK G G +K D+ T
Sbjct: 648 LSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKKFSGKFGSMKRDLQVETEKNPAT 707
Query: 291 VESK 294
ESK
Sbjct: 708 SESK 711
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 87/385 (22%), Positives = 155/385 (40%), Gaps = 67/385 (17%)
Query: 4 NSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLK 63
N+ + L + M++L L+PD+ +YN L+ C G L+ + K ++ +E+ G +K
Sbjct: 322 NAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELG---LSLEARKLMEQMENDG-VK 377
Query: 64 LDVFTYSTIIK-VFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQ 122
+ T++ +K + + K + KVK + G + + V + +LI A G + A++
Sbjct: 378 ANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALE 437
Query: 123 LFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKML------GSFGEGYN 176
+ EM G + NT N IL A + + D A +S + G+ G+
Sbjct: 438 MMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGF- 496
Query: 177 SNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKALI--- 233
++ + A + + +I TPT ST+N+L+ G +H K +
Sbjct: 497 --FREEKVEKALEMWDEMKKVKI---------TPTVSTFNSLI---GGLCHHGKTELAME 542
Query: 234 --NEMKTVGLSPNQITW-SILIDICGGTENVEGAIEILKSMGDAGIKPD----------- 279
+E+ GL P+ T+ SI++ C VE A E KPD
Sbjct: 543 KFDELAESGLLPDDSTFNSIILGYCKEG-RVEKAFEFYNESIKHSFKPDNYTCNILLNGL 601
Query: 280 -----------------------VIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWV 316
+ Y T I + K K+A L EM+ + P+
Sbjct: 602 CKEGMTEKALNFFNTLIEEREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRF 661
Query: 317 TYNTLLKARSKYGSVLEVQQCLAIY 341
TYN+ + + G + E + L +
Sbjct: 662 TYNSFISLLMEDGKLSETDELLKKF 686
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 112/244 (45%), Gaps = 26/244 (10%)
Query: 108 INACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKM 167
++A H G A+Q+F++M+ +PN N +L V +Y +F
Sbjct: 138 LSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLV---RYPSSFS---------- 184
Query: 168 LGSFGEGYNSNLKQGSIHNATT---VPNGF----SNSQILSFTER----FPFTPTTSTYN 216
+ S E ++ +K G N T + NG+ L ER F P TYN
Sbjct: 185 ISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYN 244
Query: 217 TLLKACGSD--YYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDA 274
T+LKA K L+ +MK GL PN++T++ L+ +++ A +I++ M
Sbjct: 245 TILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQT 304
Query: 275 GIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEV 334
+ PD+ Y I + + ++ L L + MKS ++ P+ VTYNTL+ + G LE
Sbjct: 305 NVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEA 364
Query: 335 QQCL 338
++ +
Sbjct: 365 RKLM 368
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 89/386 (23%), Positives = 158/386 (40%), Gaps = 45/386 (11%)
Query: 3 VNSRDLTYTLNIYQIMQNLGLKPDMTS--YNILLKACCVAGRVDLAQDMYKELKHLESVG 60
+ + D + +L + NL L P + ++I L A G+ +A +++++ L
Sbjct: 105 IRTSDASLSLCNSLLHPNLHLSPPPSKALFDIALSAYLHEGKPHVALQIFQKMIRL---- 160
Query: 61 RLKLDVFTYSTII---KVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLV 117
+LK ++ T +T++ + + A +V DM GV+LN ++ L+N G +
Sbjct: 161 KLKPNLLTCNTLLIGLVRYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKL 220
Query: 118 EQAIQLFEEMLLA-GCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKM--------- 167
E A+ + E M+ P+ +N IL A + + K N +
Sbjct: 221 EDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNN 280
Query: 168 -------LGSFGEGYN--SNLKQGSIH----NATTVPNGFSNS-------QILSFTERFP 207
LGS E + +KQ ++ + NG N+ +++ +
Sbjct: 281 LVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLK 340
Query: 208 FTPTTSTYNTLLKACGS--DYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAI 265
P TYNTL+ C A+ L+ +M+ G+ NQ+T +I + E E
Sbjct: 341 LQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVT 400
Query: 266 EILKSMGDA-GIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKA 324
+K + D G PD++ Y T IK ++ + AL + EM I N +T NT+L A
Sbjct: 401 RKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDA 460
Query: 325 RSKYGSVLEVQQCLAIYQDMQKAGYV 350
K + E L K G++
Sbjct: 461 LCKERKLDEAHNLL---NSAHKRGFI 483
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/356 (19%), Positives = 141/356 (39%), Gaps = 70/356 (19%)
Query: 11 TLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYS 70
++ ++Q M+ +G+ P + ++N LL GR +A D++ E++ V D +T++
Sbjct: 157 SVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYGVTP---DSYTFN 213
Query: 71 TIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLA 130
T+I F + A ++ DM N + V ++++I+ AG V+ A + ML
Sbjct: 214 TLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKK 273
Query: 131 GCE--PNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNAT 188
+ PN + ++ + D A FH L +G
Sbjct: 274 ATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDM----------------LSRG------ 311
Query: 189 TVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKALINEMKTV--------- 239
P TYNTL+K + + +E+K +
Sbjct: 312 -------------------LKPNAVTYNTLIKGLSEAHRY-----DEIKDILIGGNDAFT 347
Query: 240 GLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQA 299
+P+ T++ILI +++ A+++ + M + + PD +Y+ I+ F +A
Sbjct: 348 TFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRA 407
Query: 300 LTLYEEMKSCEI-------HPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAG 348
TL+ E+ E+ P YN + + G + +Q +++ + K G
Sbjct: 408 ETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANG---KTKQAEKVFRQLMKRG 460
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 112/253 (44%), Gaps = 45/253 (17%)
Query: 91 DMRSAG-VNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEA 149
+ RS G V L ++SLI + +AGL +++++LF+ M G P+ FN +L ++
Sbjct: 127 ERRSNGCVKLQDRYFNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKR 186
Query: 150 CQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFT 209
+ A F ++M ++G T
Sbjct: 187 GRTGMAHDLF-----DEMRRTYG-----------------------------------VT 206
Query: 210 PTTSTYNTLLKA-CGSDYY-HAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEI 267
P + T+NTL+ C + A + +M+ +P+ +T++ +ID V+ A +
Sbjct: 207 PDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNV 266
Query: 268 LKSM--GDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKAR 325
L M + P+V++YTT ++ + +A+ ++ +M S + PN VTYNTL+K
Sbjct: 267 LSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGL 326
Query: 326 SKYGSVLEVQQCL 338
S+ E++ L
Sbjct: 327 SEAHRYDEIKDIL 339
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 77/334 (23%), Positives = 144/334 (43%), Gaps = 53/334 (15%)
Query: 18 MQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFA 77
+Q L + N++L+ ++GR QD+ + + ++ G K+ V TYS+ IK F
Sbjct: 89 LQRLATVLKVQDLNVILRDFGISGR---WQDLIQLFEWMQQHG--KISVSTYSSCIK-FV 142
Query: 78 DAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQ 137
AK AL++ + +N +S+++ G ++ I+LF++M G +P+
Sbjct: 143 GAKNVSKALEIYQSIPDESTKINVYICNSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVV 202
Query: 138 CFNIILHACVEACQ-YDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSN 196
+N +L C++ Y +A GE ++ ++ S+
Sbjct: 203 TYNTLLAGCIKVKNGYPKAIELI------------GELPHNGIQMDSV------------ 238
Query: 197 SQILSFTERFPFTPTTSTYNTLLKACGSD--YYHAKALINEMKTVGLSPNQITWSILIDI 254
Y T+L C S+ A+ I +MK G SPN +S L++
Sbjct: 239 -----------------MYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNS 281
Query: 255 CGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPN 314
+ + A E++ M G+ P+ + TT +KV ++ F ++ L E++S N
Sbjct: 282 YSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAEN 341
Query: 315 WVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAG 348
+ Y L+ SK G + E + +I+ DM+ G
Sbjct: 342 EMPYCMLMDGLSKAGKLEEAR---SIFDDMKGKG 372
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 65/322 (20%), Positives = 130/322 (40%), Gaps = 44/322 (13%)
Query: 3 VNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACC-VAGRVDLAQDMYKELKHLESVGR 61
V + L + ++ M+ GLKPD+ +YN LL C V A ++ EL H
Sbjct: 177 VKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYPKAIELIGELPH----NG 232
Query: 62 LKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAI 121
+++D Y T++ + A + A M+ G + N +SSL+N+ + G ++A
Sbjct: 233 IQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKAD 292
Query: 122 QLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQ 181
+L EM G PN +L ++ +DR+ S L+
Sbjct: 293 ELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELL-----------------SELES 335
Query: 182 GSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKALINEMKTVGL 241
G++ +++ P + L KA A+++ ++MK G+
Sbjct: 336 A----------GYAENEM----------PYCMLMDGLSKA--GKLEEARSIFDDMKGKGV 373
Query: 242 SPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALT 301
+ SI+I ++ + A E+ + K D++ T + + + +
Sbjct: 374 RSDGYANSIMISALCRSKRFKEAKELSRDSETTYEKCDLVMLNTMLCAYCRAGEMESVMR 433
Query: 302 LYEEMKSCEIHPNWVTYNTLLK 323
+ ++M + P++ T++ L+K
Sbjct: 434 MMKKMDEQAVSPDYNTFHILIK 455
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 80/349 (22%), Positives = 153/349 (43%), Gaps = 58/349 (16%)
Query: 1 MNVNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVG 60
++ + D+ ++ M++ GLKPD SY LL A + V+ A+ + E+
Sbjct: 376 LHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDD----D 431
Query: 61 RLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQA 120
+++D +T S + +++ +A++ + + AG N+++ +S+ I+A G + +A
Sbjct: 432 NVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAG-NMSSEGYSANIDAYGERGYLSEA 490
Query: 121 IQLFEEMLLAGCEPNTQC---FNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNS 177
++F + E N + +N+++ A + ++A F S + S+G
Sbjct: 491 ERVF----ICCQEVNKRTVIEYNVMIKAYGISKSCEKACELFES------MMSYG----- 535
Query: 178 NLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGS-DYYH-AKALINE 235
TP TYNTL++ S D H + + +
Sbjct: 536 ------------------------------VTPDKCTYNTLVQILASADMPHKGRCYLEK 565
Query: 236 MKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKN 295
M+ G + I + +I + A E+ K M + I+PDV+ Y I ++ N
Sbjct: 566 MRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGN 625
Query: 296 FKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDM 344
+QA++ E MK I N V YN+L+K +K G + E + AIY+ +
Sbjct: 626 VQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAE---AIYRKL 671
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/309 (23%), Positives = 129/309 (41%), Gaps = 43/309 (13%)
Query: 14 IYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTII 73
+++ M + G+ PD +YN L++ + D+ L+ + G + D Y +I
Sbjct: 527 LFESMMSYGVTPDKCTYNTLVQ---ILASADMPHKGRCYLEKMRETGYVS-DCIPYCAVI 582
Query: 74 KVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCE 133
F MA +V +M + + V + LINA A G V+QA+ E M AG
Sbjct: 583 SSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIP 642
Query: 134 PNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNG 193
N+ +N ++ + D A + K+L S N T P+
Sbjct: 643 GNSVIYNSLIKLYTKVGYLDEAEAIYR-----KLLQSC--------------NKTQYPDV 683
Query: 194 F-SNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKALINEMKTVGLSPNQITWSILI 252
+ SN I ++ER S A+A+ + MK G N+ T+++++
Sbjct: 684 YTSNCMINLYSER------------------SMVRKAEAIFDSMKQRG-EANEFTFAMML 724
Query: 253 DICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIH 312
+ E A +I K M + I D ++Y + + + FK+A+ ++EM S I
Sbjct: 725 CMYKKNGRFEEATQIAKQMREMKILTDPLSYNSVLGLFALDGRFKEAVETFKEMVSSGIQ 784
Query: 313 PNWVTYNTL 321
P+ T+ +L
Sbjct: 785 PDDSTFKSL 793
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 122/276 (44%), Gaps = 15/276 (5%)
Query: 56 LESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAG 115
+S G +L+V Y+ ++++ A W+ + +M G+ + +LI+ + G
Sbjct: 177 FKSKGCYELNVIHYNIMLRILGKACKWRYVQSLWDEMIRKGIKPINSTYGTLIDVYSKGG 236
Query: 116 LVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGY 175
L A+ +M G +P+ I+L +A ++ +A FF W ++
Sbjct: 237 LKVHALCWLGKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSCDE------NKA 290
Query: 176 NSNLKQGSIHNATTVPNGFSNSQILSFTERFP------FTPTTSTYNTLLKACGSDYYHA 229
+S++ S T + + QI +E F PTT T+NT++ G++
Sbjct: 291 DSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNN-GQL 349
Query: 230 KALINEMKTVGL--SPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAI 287
+ + MKT+ L +P+ T++ILI + ++E A K M D G+KPD ++Y T +
Sbjct: 350 GEVTSLMKTMKLHCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLL 409
Query: 288 KVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLK 323
++A L EM + + T + L +
Sbjct: 410 YAFSIRHMVEEAEGLIAEMDDDNVEIDEYTQSALTR 445
>AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19763152-19765136 FORWARD
LENGTH=508
Length = 508
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 76/343 (22%), Positives = 149/343 (43%), Gaps = 18/343 (5%)
Query: 14 IYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTII 73
++Q M N G + Y L+ A +GR D A + L+ ++S + DV TYS +I
Sbjct: 172 LFQEMINEGCVVNHEVYTALVSAYSRSGRFDAA---FTLLERMKSSHNCQPDVHTYSILI 228
Query: 74 KVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGL-VEQAIQLFEEMLLAGC 132
K F + + DMR G+ NT+ +++LI+A A + VE L + + C
Sbjct: 229 KSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLIDAYGKAKMFVEMESTLIQMLGEDDC 288
Query: 133 EPNTQCFNIILHACVEACQ---YDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATT 189
+P++ N L A Q + + F S + +F +S K G+
Sbjct: 289 KPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKM-- 346
Query: 190 VPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGS--DYYHAKALINEMKTVGLSPNQIT 247
S ++ + +++ ++ T TYN ++ A G D + L M++ + P+ +T
Sbjct: 347 -------SAVMEYMQKYHYSWTIVTYNVVIDAFGRAGDLKQMEYLFRLMQSERIFPSCVT 399
Query: 248 WSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMK 307
L+ G + +L+ + ++ I+ D++ + + + F + + E M+
Sbjct: 400 LCSLVRAYGRASKADKIGGVLRFIENSDIRLDLVFFNCLVDAYGRMEKFAEMKGVLELME 459
Query: 308 SCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYV 350
P+ +TY T++KA G V++ + + + +A V
Sbjct: 460 KKGFKPDKITYRTMVKAYRISGMTTHVKELHGVVESVGEAQVV 502
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 110/272 (40%), Gaps = 47/272 (17%)
Query: 82 WQMALKVKHDMRSA-GVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFN 140
W+ A++V +R N + LI E+A +LF+EM+ GC N + +
Sbjct: 130 WESAIQVFELLREQLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYT 189
Query: 141 IILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQIL 200
++ A + ++D AF K S HN
Sbjct: 190 ALVSAYSRSGRFDAAFTLLERMK-------------------SSHNC------------- 217
Query: 201 SFTERFPFTPTTSTYNTLLKACGSDYYHAKA--LINEMKTVGLSPNQITWSILIDICGGT 258
P TY+ L+K+ + K L+++M+ G+ PN IT++ LID G
Sbjct: 218 --------QPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLIDAYGKA 269
Query: 259 EN-VEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVT 317
+ VE +++ +G+ KPD + ++ + + YE+ +S I PN T
Sbjct: 270 KMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGIEPNIRT 329
Query: 318 YNTLLKARSKYGSVLEVQQCLAIYQDMQKAGY 349
+N LL + YG ++ A+ + MQK Y
Sbjct: 330 FNILLDS---YGKSGNYKKMSAVMEYMQKYHY 358
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 67/160 (41%), Gaps = 4/160 (2%)
Query: 183 SIHNATTVPNGFSNSQILSF-TERFPFTPTTSTYNTLLKACGSDYYHAKA--LINEMKTV 239
S+H T S Q+ E+ + P Y L+ G KA L EM
Sbjct: 120 SLHERITALRWESAIQVFELLREQLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINE 179
Query: 240 GLSPNQITWSILIDICGGTENVEGAIEILKSMGDA-GIKPDVIAYTTAIKVCVESKNFKQ 298
G N ++ L+ + + A +L+ M + +PDV Y+ IK ++ F +
Sbjct: 180 GCVVNHEVYTALVSAYSRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDK 239
Query: 299 ALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCL 338
L +M+ I PN +TYNTL+ A K +E++ L
Sbjct: 240 VQDLLSDMRRQGIRPNTITYNTLIDAYGKAKMFVEMESTL 279
>AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17618948-17620588 FORWARD
LENGTH=546
Length = 546
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 114/286 (39%), Gaps = 47/286 (16%)
Query: 65 DVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLF 124
DV +YS I++ KL+ + V M GVN + + +++ V +AI+LF
Sbjct: 150 DVGSYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVHYVRRAIELF 209
Query: 125 EEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSI 184
EE G + +T+ FN +L E A F++ KGN
Sbjct: 210 EESESFGVKCSTESFNALLRCLCERSHVSAAKSVFNAKKGN------------------- 250
Query: 185 HNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACG--SDYYHAKALINEMKTVGLS 242
PF + +YN ++ + + ++ EM G
Sbjct: 251 ---------------------IPF--DSCSYNIMISGWSKLGEVEEMEKVLKEMVESGFG 287
Query: 243 PNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTL 302
P+ +++S LI+ G T + ++EI ++ G PD Y I + +++F +++
Sbjct: 288 PDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAMICNFISARDFDESMRY 347
Query: 303 YEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAG 348
Y M E PN TY+ L+ K +V L I+++M G
Sbjct: 348 YRRMLDEECEPNLETYSKLVSGLIKG---RKVSDALEIFEEMLSRG 390
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/315 (19%), Positives = 126/315 (40%), Gaps = 17/315 (5%)
Query: 11 TLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYS 70
+ +++ ++ G+K S+N LL+ C V A+ ++ K G + D +Y+
Sbjct: 205 AIELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVFNAKK-----GNIPFDSCSYN 259
Query: 71 TIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLA 130
+I ++ + KV +M +G + +++S LI G + ++++F+ +
Sbjct: 260 IMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHK 319
Query: 131 GCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTV 190
G P+ +N ++ + A +D + R++ +ML E NL+ S + +
Sbjct: 320 GNVPDANVYNAMICNFISARDFDESMRYYR-----RML---DEECEPNLETYSKLVSGLI 371
Query: 191 PNGFSNSQILSFTERFP--FTPTTSTYNTLLKA-CGSDYYHAKALI-NEMKTVGLSPNQI 246
+ + F E PTT + LK C HA +I + + G ++
Sbjct: 372 KGRKVSDALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISES 431
Query: 247 TWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEM 306
+ +L+ + + M ++G DV Y + + + A+ + EE
Sbjct: 432 AYKLLLKRLSRFGKCGMLLNVWDEMQESGYPSDVEVYEYIVDGLCIIGHLENAVLVMEEA 491
Query: 307 KSCEIHPNWVTYNTL 321
PN Y+ L
Sbjct: 492 MRKGFCPNRFVYSRL 506
>AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:1956658-1958240
REVERSE LENGTH=486
Length = 486
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/319 (21%), Positives = 136/319 (42%), Gaps = 12/319 (3%)
Query: 14 IYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTII 73
++ M GL+P + Y LL A R +L D + L ++S + + DVFTYST++
Sbjct: 146 LFDEMLEEGLEPTVELYTALLAAYT---RSNLIDDAFSILDKMKSFPQCQPDVFTYSTLL 202
Query: 74 KVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLA-GC 132
K DA + + + +M + NTV + +++ G +Q ++ +ML++ C
Sbjct: 203 KACVDASQFDLVDSLYKEMDERLITPNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVSTAC 262
Query: 133 EPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPN 192
+P+ NIIL + D ++ ++ G E N+ GS
Sbjct: 263 KPDVWTMNIILSVFGNMGKIDMMESWYEKFRN---FGIEPETRTFNILIGSYGKKRMYDK 319
Query: 193 GFSNSQILSFTERFPFTPTTSTYNTLLKACGS--DYYHAKALINEMKTVGLSPNQITWSI 250
S ++ + + F TTSTYN +++A D + + ++M++ G+ + T+
Sbjct: 320 ---MSSVMEYMRKLEFPWTTSTYNNIIEAFADVGDAKNMELTFDQMRSEGMKADTKTFCC 376
Query: 251 LIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCE 310
LI+ I ++ I + Y I C ++ + + +Y MK +
Sbjct: 377 LINGYANAGLFHKVISSVQLAAKFEIPENTAFYNAVISACAKADDLIEMERVYIRMKERQ 436
Query: 311 IHPNWVTYNTLLKARSKYG 329
+ T+ +++A K G
Sbjct: 437 CVCDSRTFEIMVEAYEKEG 455
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 63/140 (45%), Gaps = 6/140 (4%)
Query: 208 FTPTTSTYNTLLKACGSDYY--HAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAI 265
+ P TY LL G A+ L +EM GL P ++ L+ + ++ A
Sbjct: 120 YQPKEGTYMKLLVLLGKSGQPNRAQKLFDEMLEEGLEPTVELYTALLAAYTRSNLIDDAF 179
Query: 266 EILKSMGD-AGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKA 324
IL M +PDV Y+T +K CV++ F +LY+EM I PN VT N +L
Sbjct: 180 SILDKMKSFPQCQPDVFTYSTLLKACVDASQFDLVDSLYKEMDERLITPNTVTQNIVL-- 237
Query: 325 RSKYGSVLEVQQCLAIYQDM 344
S YG V Q + DM
Sbjct: 238 -SGYGRVGRFDQMEKVLSDM 256
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 105/283 (37%), Gaps = 55/283 (19%)
Query: 70 STIIKVFAD---AKLWQMALKVKHDMRSAGV-NLNTVAWSSLINACAHAGLVEQAIQLFE 125
+T+ + +D K W AL+V +R + L+ +G +A +LF+
Sbjct: 89 NTVTETLSDLIAKKQWLQALEVFDMLREQTFYQPKEGTYMKLLVLLGKSGQPNRAQKLFD 148
Query: 126 EMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIH 185
EML G EP + + +L A + D AF
Sbjct: 149 EMLEEGLEPTVELYTALLAAYTRSNLIDDAF----------------------------- 179
Query: 186 NATTVPNGFSNSQILSFTERFPF-TPTTSTYNTLLKAC--GSDYYHAKALINEMKTVGLS 242
IL + FP P TY+TLLKAC S + +L EM ++
Sbjct: 180 ------------SILDKMKSFPQCQPDVFTYSTLLKACVDASQFDLVDSLYKEMDERLIT 227
Query: 243 PNQITWSILIDICGGTENVEGAIEILKSM-GDAGIKPDVIAYTTAIKVCVESKNFKQALT 301
PN +T +I++ G + ++L M KPDV + V +
Sbjct: 228 PNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVSTACKPDVWTMNIILSVFGNMGKIDMMES 287
Query: 302 LYEEMKSCEIHPNWVTYNTLL----KAR--SKYGSVLEVQQCL 338
YE+ ++ I P T+N L+ K R K SV+E + L
Sbjct: 288 WYEKFRNFGIEPETRTFNILIGSYGKKRMYDKMSSVMEYMRKL 330
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/365 (22%), Positives = 150/365 (41%), Gaps = 45/365 (12%)
Query: 4 NSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLK 63
N R+L + ++ LGL P+ Y +++AC + V + + L L G +
Sbjct: 144 NGRELD-AIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGR---VTLGFLMKTGHFE 199
Query: 64 LDVFTYSTIIKVFADAK-LWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQ 122
DV ++I +F + ++ A KV M LN V W+ +I C G +AI+
Sbjct: 200 SDVCVGCSLIDMFVKGENSFENAYKVFDKMS----ELNVVTWTLMITRCMQMGFPREAIR 255
Query: 123 LFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKML-----GSFGEGYNS 177
F +M+L+G E + + + AC E + HSW L S + Y
Sbjct: 256 FFLDMVLSGFESDKFTLSSVFSACAELENLSLG-KQLHSWAIRSGLVDDVECSLVDMYAK 314
Query: 178 NLKQGSIHNATTVPNGFSNSQILSFTERFP------------------------FTPTTS 213
GS+ + V + + ++S+T P
Sbjct: 315 CSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHF 374
Query: 214 TYNTLLKACG--SDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSM 271
T+++ KACG SD K ++ + GL+ N + +I + ++ +E A +S+
Sbjct: 375 TFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESL 434
Query: 272 GDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSV 331
+ ++++Y T + + NF+QA L E+ E+ + T+ +LL + GS+
Sbjct: 435 SE----KNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSI 490
Query: 332 LEVQQ 336
+ +Q
Sbjct: 491 RKGEQ 495
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 76/358 (21%), Positives = 153/358 (42%), Gaps = 46/358 (12%)
Query: 2 NVNSRDLTYTLNIYQIMQNLGLKP-DMTSYNILLKACCVAGRVDLAQDMYKELKHLESVG 60
++N+ DL ++ +M G++P D +++ LLK+C A L + ++ L +
Sbjct: 36 HLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFD--- 92
Query: 61 RLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQA 120
++ D Y+++I +++ + A V MR G + V+WS+++ + G A
Sbjct: 93 -IEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFG-KRDVVSWSAMMACYGNNGRELDA 150
Query: 121 IQLFEEMLLAGCEPNTQCFNIILHAC-----VEACQYDRAFRF----FHS--WKGNKMLG 169
I++F E L G PN C+ ++ AC V + F F S G ++
Sbjct: 151 IKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLID 210
Query: 170 SFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFT--------ERFPFTPTTSTYNTLLKA 221
F +G N S NA V + S ++++T FP + +L
Sbjct: 211 MFVKGEN------SFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSG 264
Query: 222 CGSDYYHAKALIN---EMKTVGLSPNQITWSILIDICGGTE----------NVEGAIEIL 268
SD + ++ + E++ + L +W+I + E + +G+++
Sbjct: 265 FESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDVECSLVDMYAKCSADGSVDDC 324
Query: 269 KSMGDAGIKPDVIAYTTAIKVCVESKNFK-QALTLYEEM-KSCEIHPNWVTYNTLLKA 324
+ + D V+++T I +++ N +A+ L+ EM + PN T+++ KA
Sbjct: 325 RKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKA 382
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1955959-1959051 FORWARD
LENGTH=1030
Length = 1030
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/304 (21%), Positives = 134/304 (44%), Gaps = 17/304 (5%)
Query: 12 LNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYST 71
L +++ M+ G + D T+YNI++++ C+AGR DLA + YKE+ + + TY
Sbjct: 244 LLVFEKMRKSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMME----KGITFGLRTYKM 299
Query: 72 IIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAG 131
++ A ++ + + DM A+ L+ + +G +++A++L E+
Sbjct: 300 LLDCIAKSEKVDVVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIKEALELIRELKNKE 359
Query: 132 CEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGS--FGEGYNSNLKQGSIHNATT 189
+ + F I++ A + A K K+ S +G + L+Q + A
Sbjct: 360 MCLDAKYFEILVKGLCRANRMVDALEIVDIMKRRKLDDSNVYGIIISGYLRQNDVSKA-- 417
Query: 190 VPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKA--LINEMKTVGLSPNQIT 247
+++ + R P STY +++ K L NEM G+ P+ +
Sbjct: 418 ----LEQFEVIKKSGR---PPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVA 470
Query: 248 WSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMK 307
+ ++ G V A ++ SM + GIKP +Y+ +K S + + + ++ +M
Sbjct: 471 ITAVVAGHLGQNRVAEAWKVFSSMEEKGIKPTWKSYSIFVKELCRSSRYDEIIKIFNQMH 530
Query: 308 SCEI 311
+ +I
Sbjct: 531 ASKI 534
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 67/149 (44%), Gaps = 12/149 (8%)
Query: 208 FTPTTSTYNTLLKACGS--DYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAI 265
F+ YNT+L G + L++EM+ G + TW+ILI + G + + +
Sbjct: 185 FSHRVGIYNTMLSIAGEARNLDMVDELVSEMEKNGCDKDIRTWTILISVYGKAKKIGKGL 244
Query: 266 EILKSMGDAGIKPDVIAYTTAIK-VCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKA 324
+ + M +G + D AY I+ +C+ + AL Y+EM I TY LL
Sbjct: 245 LVFEKMRKSGFELDATAYNIMIRSLCIAGRG-DLALEFYKEMMEKGITFGLRTYKMLLDC 303
Query: 325 RSKYGSVLEVQQCLAIYQDMQKAGYVRLC 353
+K V VQ +I DM VR+C
Sbjct: 304 IAKSEKVDVVQ---SIADDM-----VRIC 324
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 58/139 (41%), Gaps = 4/139 (2%)
Query: 204 ERFPFTPTTSTYNTLLK--ACGSDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENV 261
+R + + YN +K CG D+ ++L EM+ G Q TW+I+I G T
Sbjct: 670 KRNGYKHNSEAYNMSIKVAGCGKDFKQMRSLFYEMRRQGCLITQDTWAIMIMQYGRTGLT 729
Query: 262 EGAIEILKSMGDAGIKPDVIAYTTAIKVCVESK--NFKQALTLYEEMKSCEIHPNWVTYN 319
AI K M D G+ P + I V E K N ++A + EM P+
Sbjct: 730 NIAIRTFKEMKDMGLIPSSSTFKCLITVLCEKKGRNVEEATRTFREMIRSGFVPDRELVQ 789
Query: 320 TLLKARSKYGSVLEVQQCL 338
L + G+ + + CL
Sbjct: 790 DYLGCLCEVGNTKDAKSCL 808
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/340 (22%), Positives = 142/340 (41%), Gaps = 25/340 (7%)
Query: 18 MQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKEL-KHLESVGRLKLDVFTYSTIIKVF 76
M+ +G P+ SYN L+K C VD A ++ + K+ R+ ++ ++ K
Sbjct: 182 MREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGV 241
Query: 77 A---DAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCE 133
+ KL + L D A L+ V + L+++C G V QA+++++EM
Sbjct: 242 IGNNNKKLLEEIL----DSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVP 297
Query: 134 PNTQCFNIILHACVEACQYDRAFRFFHSW--KG-NKMLGSFGEGYNSNLKQGSIHNATTV 190
++ +N+I+ + A+ F +G N + ++ ++ K+G A +
Sbjct: 298 ADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDL 357
Query: 191 PNGFSNSQILSFTERFPFTPTTSTYNTLLKA--CGSDYYHAKALINEMKTVGLSPNQITW 248
N + P +Y +++ D A + M L P + W
Sbjct: 358 HGTMQNGGV---------APDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLW 408
Query: 249 SILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKS 308
+++ID G + A+ +L M G+KP+V I V+ A + EM+S
Sbjct: 409 NVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRS 468
Query: 309 CEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAG 348
+IHP+ TYN LL A G ++ +Y +M + G
Sbjct: 469 TKIHPDTTTYNLLLGAACTLG---HLRLAFQLYDEMLRRG 505
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/316 (21%), Positives = 126/316 (39%), Gaps = 36/316 (11%)
Query: 26 DMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMA 85
D+ IL+ +C G V A +++KE+ S + D Y+ II+ + A
Sbjct: 264 DIVICTILMDSCFKNGNVVQALEVWKEM----SQKNVPADSVVYNVIIRGLCSSGNMVAA 319
Query: 86 LKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHA 145
DM GVN + +++LI+A G ++A L M G P+ + +I+
Sbjct: 320 YGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQG 379
Query: 146 CVEACQYDRAFRFFHS------------WKGNKMLGSFGEGYNSNLKQGSIHNATTVPNG 193
+RA F S W N ++ +G + G +A +V
Sbjct: 380 LCIHGDVNRANEFLLSMLKSSLLPEVLLW--NVVIDGYG-------RYGDTSSALSV--- 427
Query: 194 FSNSQILSFTERFPFTPTTSTYNTLLKAC--GSDYYHAKALINEMKTVGLSPNQITWSIL 251
L+ + P T N L+ G A + NEM++ + P+ T+++L
Sbjct: 428 ------LNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLL 481
Query: 252 IDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEI 311
+ ++ A ++ M G +PD+I YT ++ K+A +L +++ I
Sbjct: 482 LGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSRIQATGI 541
Query: 312 HPNWVTYNTLLKARSK 327
+ V + L K ++
Sbjct: 542 TIDHVPFLILAKKYTR 557
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/307 (20%), Positives = 127/307 (41%), Gaps = 43/307 (14%)
Query: 27 MTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMAL 86
++ ++ +++ C+ G++D A + K++ + + L T++ ++ A + A
Sbjct: 121 LSIHSSIMRDLCLQGKLDAALWLRKKMIYSGVIPGL----ITHNHLLNGLCKAGYIEKAD 176
Query: 87 KVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHAC 146
+ +MR G + N V++++LI V++A+ LF M G PN NII+HA
Sbjct: 177 GLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHA- 235
Query: 147 VEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERF 206
CQ KG ++G+ + + S NA
Sbjct: 236 --LCQ-----------KG--VIGNNNKKLLEEILDSSQANA------------------- 261
Query: 207 PFTPTTSTYNTLLKAC--GSDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGA 264
P T L+ +C + A + EM + + + ++++I + N+ A
Sbjct: 262 PLDIVICT--ILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAA 319
Query: 265 IEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKA 324
+ M G+ PDV Y T I + F +A L+ M++ + P+ ++Y +++
Sbjct: 320 YGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQG 379
Query: 325 RSKYGSV 331
+G V
Sbjct: 380 LCIHGDV 386
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 70/154 (45%), Gaps = 31/154 (20%)
Query: 13 NIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKH-------------LESV 59
+++ MQN G+ PD SY ++++ C+ G V+ A + + ++
Sbjct: 356 DLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGY 415
Query: 60 GR------------------LKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNT 101
GR +K +V+T + +I + A VK++MRS ++ +T
Sbjct: 416 GRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDT 475
Query: 102 VAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPN 135
++ L+ A G + A QL++EML GC+P+
Sbjct: 476 TTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPD 509
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 124/305 (40%), Gaps = 16/305 (5%)
Query: 7 DLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDV 66
+L L + M+ GL D+ +YN LL C +GR A M +++ + DV
Sbjct: 191 ELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRS----INPDV 246
Query: 67 FTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEE 126
T++ +I VF A ++ +M + V+ N V ++S+IN G + A + F+
Sbjct: 247 VTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDL 306
Query: 127 MLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNL--KQGSI 184
M GC PN +N ++ + D + F EG+N+++ I
Sbjct: 307 MASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMS--------CEGFNADIFTYNTLI 358
Query: 185 HNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKALI--NEMKTVGLS 242
H V I + TP T+ LL + AL+ ++M+
Sbjct: 359 HGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKY 418
Query: 243 PNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTL 302
+ ++I+I + VE A E+ + G+KPD YT I ++ ++A L
Sbjct: 419 IGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADEL 478
Query: 303 YEEMK 307
MK
Sbjct: 479 IRRMK 483
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 76/337 (22%), Positives = 146/337 (43%), Gaps = 17/337 (5%)
Query: 17 IMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVF 76
+M G +P++ YN L+ C G +++A ++ E+ E G L DV TY+T++
Sbjct: 166 LMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEM---EKKG-LGADVVTYNTLLTGL 221
Query: 77 ADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNT 136
+ W A ++ DM +N + V +++LI+ G +++A +L++EM+ + +PN
Sbjct: 222 CYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNN 281
Query: 137 QCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSN 196
+N I++ C + R + ++ G F N V G
Sbjct: 282 VTYNSIING---LCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKL 338
Query: 197 SQILSFTERFPFTPTTSTYNTLLKA-CGSDYYH-AKALINEMKTVGLSPNQITWSILI-D 253
Q +S F TYNTL+ C A + M + ++P+ IT IL+
Sbjct: 339 FQRMSCE---GFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHG 395
Query: 254 ICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHP 313
+C E +E A+ M ++ ++AY I ++ ++A L+ + + P
Sbjct: 396 LCVNGE-IESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKP 454
Query: 314 NWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYV 350
+ TY ++ K G E + + + M++ G +
Sbjct: 455 DARTYTIMILGLCKNGPRREADE---LIRRMKEEGII 488
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 108/239 (45%), Gaps = 12/239 (5%)
Query: 102 VAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHS 161
V ++ L+ A A+ E I ++M L G + F I++H C+ R F S
Sbjct: 72 VDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHC---FCRCSR-LSFALS 127
Query: 162 WKGNKMLGSFGEGYNSNLKQ-GSIHNATTVPNGFSNS-QILSFTERFPFTPTTSTYNTLL 219
G M GY ++ GS+ + + N ++ ++ + + P YNTL+
Sbjct: 128 VLGKMM----KLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLI 183
Query: 220 KAC--GSDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIK 277
+ A L+NEM+ GL + +T++ L+ + A +L+ M I
Sbjct: 184 DGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSIN 243
Query: 278 PDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQ 336
PDV+ +T I V V+ N +A LY+EM + PN VTYN+++ +G + + ++
Sbjct: 244 PDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKK 302
>AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675575 FORWARD
LENGTH=349
Length = 349
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 81/145 (55%), Gaps = 10/145 (6%)
Query: 210 PTTSTYNTLLK---ACGSDYYHAKALINEMKT-VGLSPNQITWSILIDICGGTENVEGAI 265
P T TYN LLK C D + ++EM+ + P+ ++++ILID ++N+ A+
Sbjct: 192 PDTYTYNFLLKHLCKC-KDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAM 250
Query: 266 EILKSMGDAGIKPDVIAYTTAIK-VCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKA 324
++ +G+AG KPD Y T +K C SK +A+ +Y++MK + P+ +TYNTL+
Sbjct: 251 YLVSKLGNAGFKPDCFLYNTIMKGFCTLSKG-SEAVGVYKKMKEEGVEPDQITYNTLIFG 309
Query: 325 RSKYGSVLEVQQCLAIYQDMQKAGY 349
SK G V E + L + M AGY
Sbjct: 310 LSKAGRVEEARMYL---KTMVDAGY 331
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 69/132 (52%), Gaps = 4/132 (3%)
Query: 14 IYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTII 73
+ ++ + +KPD+ S+ IL+ C + +L + MY + L + G K D F Y+TI+
Sbjct: 217 VDEMRDDFDVKPDLVSFTILIDNVCNSK--NLREAMYL-VSKLGNAG-FKPDCFLYNTIM 272
Query: 74 KVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCE 133
K F A+ V M+ GV + + +++LI + AG VE+A + M+ AG E
Sbjct: 273 KGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYE 332
Query: 134 PNTQCFNIILHA 145
P+T + +++
Sbjct: 333 PDTATYTSLMNG 344
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 69/131 (52%), Gaps = 5/131 (3%)
Query: 14 IYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTII 73
+ +M N GL+PD + +I +++ C GRVD A+D+ KEL S D +TY+ ++
Sbjct: 146 VLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPP----DTYTYNFLL 201
Query: 74 KVFADAKLWQMALKVKHDMRSA-GVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGC 132
K K + + +MR V + V+++ LI+ ++ + +A+ L ++ AG
Sbjct: 202 KHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGF 261
Query: 133 EPNTQCFNIIL 143
+P+ +N I+
Sbjct: 262 KPDCFLYNTIM 272
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 83/200 (41%), Gaps = 15/200 (7%)
Query: 92 MRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQ 151
M + G+ + V + + G V++A L +E+ P+T +N +L +
Sbjct: 150 MVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKD 209
Query: 152 YDRAFRFFHSWKGN----KMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFP 207
+ F + + L SF ++ ++ A + + N+
Sbjct: 210 LHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAG--------- 260
Query: 208 FTPTTSTYNTLLKA-CG-SDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAI 265
F P YNT++K C S A + +MK G+ P+QIT++ LI VE A
Sbjct: 261 FKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEAR 320
Query: 266 EILKSMGDAGIKPDVIAYTT 285
LK+M DAG +PD YT+
Sbjct: 321 MYLKTMVDAGYEPDTATYTS 340
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/324 (22%), Positives = 135/324 (41%), Gaps = 24/324 (7%)
Query: 7 DLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDV 66
D L+++ Q +G + D SY+ L+ + D + + +++ R L
Sbjct: 61 DPEEALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESL-- 118
Query: 67 FTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEE 126
+ +I+ + A A+ V H + S + ++LIN G +E+A F+
Sbjct: 119 --FMGLIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDG 176
Query: 127 MLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNL----KQG 182
PN+ FNI++ ++ C ++ A + F ++ S YNS + +
Sbjct: 177 AKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVT-YNSLIGFLCRND 235
Query: 183 SIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKA--CGSDYYHAKALINEMKTVG 240
+ A ++ +I P T+ L+K C +Y AK L+ +M+ G
Sbjct: 236 DMGKAKSLLEDMIKKRI---------RPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRG 286
Query: 241 LSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIK-VCVESKNFKQA 299
P + + IL+ G ++ A +L M IKPDV+ Y + +C E + +
Sbjct: 287 CKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAY 346
Query: 300 LTLYE-EMKSCEIHPNWVTYNTLL 322
L E +MK C+ PN TY ++
Sbjct: 347 RVLTEMQMKGCK--PNAATYRMMI 368
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 119/285 (41%), Gaps = 18/285 (6%)
Query: 27 MTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMAL 86
+ S N L+ G ++ A+ + K + RL+ + +++ +IK F D W+ A
Sbjct: 151 IQSLNTLINVLVDNGELEKAKSFFDGAKDM----RLRPNSVSFNILIKGFLDKCDWEAAC 206
Query: 87 KVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHAC 146
KV +M V + V ++SLI + +A L E+M+ PN F +++
Sbjct: 207 KVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGL 266
Query: 147 VEACQYDRAFR--FFHSWKGNKM-LGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFT 203
+Y+ A + F ++G K L ++G + K+G I A + +I
Sbjct: 267 CCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRI---- 322
Query: 204 ERFPFTPTTSTYNTLLKACGSDYYHAKA--LINEMKTVGLSPNQITWSILIDICGGTENV 261
P YN L+ ++ +A ++ EM+ G PN T+ ++ID E+
Sbjct: 323 -----KPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDF 377
Query: 262 EGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEM 306
+ + +L +M + P + + ++ N A + E M
Sbjct: 378 DSGLNVLNAMLASRHCPTPATFVCMVAGLIKGGNLDHACFVLEVM 422
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 66/147 (44%), Gaps = 11/147 (7%)
Query: 180 KQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKAC--GSDYYHAKALINEMK 237
K GS+ A V + ++ F T + NTL+ + AK+ + K
Sbjct: 128 KAGSVDKAIDVFHKITS---------FDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAK 178
Query: 238 TVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFK 297
+ L PN ++++ILI + E A ++ M + ++P V+ Y + I + +
Sbjct: 179 DMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMG 238
Query: 298 QALTLYEEMKSCEIHPNWVTYNTLLKA 324
+A +L E+M I PN VT+ L+K
Sbjct: 239 KAKSLLEDMIKKRIRPNAVTFGLLMKG 265
>AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4229994-4231178 REVERSE
LENGTH=394
Length = 394
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 112/247 (45%), Gaps = 47/247 (19%)
Query: 105 SSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKG 164
+ +IN G+ E A ++F+EM C+ FN +L+ACV + ++D F G
Sbjct: 110 ARIINLYGRVGMFENAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPG 169
Query: 165 NKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKA-CG 223
+ P ++YNTL+K CG
Sbjct: 170 ----------------------------------------KLSIEPDVASYNTLIKGLCG 189
Query: 224 S-DYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIA 282
+ A ALI+E++ GL P+ IT++IL+ E +I M + +K D+ +
Sbjct: 190 KGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKNVKRDIRS 249
Query: 283 YTTA-IKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIY 341
Y + + +E+K+ ++ ++L++++K E+ P+ T+ ++K + S ++ + + Y
Sbjct: 250 YNARLLGLAMENKS-EEMVSLFDKLKGNELKPDVFTFTAMIKG---FVSEGKLDEAITWY 305
Query: 342 QDMQKAG 348
++++K G
Sbjct: 306 KEIEKNG 312
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 74/331 (22%), Positives = 137/331 (41%), Gaps = 50/331 (15%)
Query: 18 MQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFA 77
M LG++PD+ + + L+ C++ + +D +E +G +K DV + +I
Sbjct: 4 MMKLGIEPDIVTASSLVNGFCLSNSI---KDAVYVAGQMEKMG-IKRDVVVDTILIDTLC 59
Query: 78 DAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQ 137
+L AL+V M+ G++ N V +SSLI +G + A + EM PN
Sbjct: 60 KNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVI 119
Query: 138 CFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNS 197
F+ ++ A K+G + +V
Sbjct: 120 TFSALIDAYA--------------------------------KRGKLSKVDSV------- 140
Query: 198 QILSFTERFPFTPTTSTYNTLLKA-CGSDYY-HAKALINEMKTVGLSPNQITWSILIDIC 255
+ P TY++L+ C + A +++ M + G +PN +T+S L +
Sbjct: 141 --YKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGF 198
Query: 256 GGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNW 315
+ V+ I++L M G+ + ++ T IK ++ AL ++ M S + PN
Sbjct: 199 FKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNI 258
Query: 316 VTYNTLLKARSKYGSVLEVQQCLAIYQDMQK 346
+YN +L G EV++ L+ ++ MQK
Sbjct: 259 RSYNIVLAGLFANG---EVEKALSRFEHMQK 286
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/338 (21%), Positives = 140/338 (41%), Gaps = 34/338 (10%)
Query: 18 MQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFA 77
M+ +G+K D+ IL+ C V A ++ K +K + +V TYS++I
Sbjct: 39 MEKMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRG----ISPNVVTYSSLITGLC 94
Query: 78 DAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQ 137
+ A + H+M S +N N + +S+LI+A A G + + +++ M+ +PN
Sbjct: 95 KSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVF 154
Query: 138 CFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNS 197
++ +++ + D A + +G N + +T+ NGF S
Sbjct: 155 TYSSLIYGLCMHNRVDEAIKMLDLM--------ISKGCTPN-----VVTYSTLANGFFKS 201
Query: 198 -------QILSFTERFPFTPTTSTYNTLLKACGSDYYHAK------ALINEMKTVGLSPN 244
++L + T + NTL+K Y+ A + M + GL PN
Sbjct: 202 SRVDDGIKLLDDMPQRGVAANTVSCNTLIKG----YFQAGKIDLALGVFGYMTSNGLIPN 257
Query: 245 QITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYE 304
+++I++ VE A+ + M D+I YT I ++ K+A L+
Sbjct: 258 IRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFY 317
Query: 305 EMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQ 342
++K + P++ Y ++ ++ G E YQ
Sbjct: 318 KLKFKRVEPDFKAYTIMIAELNRAGMRTEADALNRFYQ 355
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 77/152 (50%), Gaps = 5/152 (3%)
Query: 13 NIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTI 72
++Y++M + + P++ +Y+ L+ C+ RVD A M L + S G +V TYST+
Sbjct: 139 SVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKM---LDLMISKG-CTPNVVTYSTL 194
Query: 73 IKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGC 132
F + +K+ DM GV NTV+ ++LI AG ++ A+ +F M G
Sbjct: 195 ANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGL 254
Query: 133 EPNTQCFNIILHACVEACQYDRAF-RFFHSWK 163
PN + +NI+L + ++A RF H K
Sbjct: 255 IPNIRSYNIVLAGLFANGEVEKALSRFEHMQK 286
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 55/104 (52%)
Query: 235 EMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESK 294
+M +G+ P+ +T S L++ + +++ A+ + M GIK DV+ T I +++
Sbjct: 3 KMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNR 62
Query: 295 NFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCL 338
AL + + MK I PN VTY++L+ K G + + ++ L
Sbjct: 63 LVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRL 106
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 79/338 (23%), Positives = 148/338 (43%), Gaps = 42/338 (12%)
Query: 7 DLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDV 66
D L++Y+ M+ GLKPD +YN + AC + + + ++ L VG L+ DV
Sbjct: 112 DHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLF---KVG-LERDV 167
Query: 67 FTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEE 126
++I ++A A K+ ++ +TV+W+S+I+ + AG + A+ LF +
Sbjct: 168 HINHSLIMMYAKCGQVGYARKLFDEI----TERDTVSWNSMISGYSEAGYAKDAMDLFRK 223
Query: 127 MLLAGCEPNTQCFNIILHACVEACQYDRAFRFFH-----------SWKGNKMLGSFGEGY 175
M G EP+ + +L AC R R ++ G+K++ +G
Sbjct: 224 MEEEGFEPDERTLVSMLGACSHLGDL-RTGRLLEEMAITKKIGLSTFLGSKLISMYG--- 279
Query: 176 NSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKALINE 235
K G + +A V N Q++ +R +T + Y+ K+ A L E
Sbjct: 280 ----KCGDLDSARRVFN-----QMIK-KDRVAWTAMITVYSQNGKSS-----EAFKLFFE 324
Query: 236 MKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKN 295
M+ G+SP+ T S ++ CG +E +I + ++ ++ T + + +
Sbjct: 325 MEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGR 384
Query: 296 FKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLE 333
++AL ++E M N T+N ++ A + G E
Sbjct: 385 VEEALRVFEAMPV----KNEATWNAMITAYAHQGHAKE 418
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 90/209 (43%), Gaps = 27/209 (12%)
Query: 18 MQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFA 77
M+ G+ PD + + +L AC G ++L + + L L+ +++ + ++ ++
Sbjct: 325 MEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASELS----LQHNIYVATGLVDMYG 380
Query: 78 DAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQ 137
+ AL+V M N W+++I A AH G ++A+ LF+ M P+
Sbjct: 381 KCGRVEEALRVFEAMPVK----NEATWNAMITAYAHQGHAKEALLLFDRM---SVPPSDI 433
Query: 138 CFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNS 197
F +L ACV A + R+FH +M FG I + T + + S +
Sbjct: 434 TFIGVLSACVHAGLVHQGCRYFH-----EMSSMFG-------LVPKIEHYTNIIDLLSRA 481
Query: 198 QIL----SFTERFPFTPTTSTYNTLLKAC 222
+L F ERFP P +L AC
Sbjct: 482 GMLDEAWEFMERFPGKPDEIMLAAILGAC 510
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 70/376 (18%), Positives = 154/376 (40%), Gaps = 51/376 (13%)
Query: 3 VNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRV----DLAQDMYKE------ 52
V + L L + MQ +G+ P++ +YN +++ C RV +L +DM+ +
Sbjct: 288 VRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDK 347
Query: 53 ----------------------LKHLESVGRLKLDVFTYSTIIKVF-----ADAKLWQMA 85
+K + L D TY+T+I + AD LW +
Sbjct: 348 VSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLK 407
Query: 86 LKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAG-CEPNTQCFNIILH 144
D + G ++ + +S++++A G + +A L EML G C P+ + +++
Sbjct: 408 -----DAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVN 462
Query: 145 ACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTE 204
+ D+A + +++ + G N+ ++ ++++ +E
Sbjct: 463 GFCRLGEVDKAKKLL------QVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSE 516
Query: 205 RFPFTPTTSTYNTLLKACGSDYYHAKA--LINEMKTVGLSPNQITWSILIDICGGTENVE 262
++P + TY+ ++ + ++A ++ EM G P + ++L+
Sbjct: 517 EHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTH 576
Query: 263 GAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLL 322
A + ++ + G +V+ +TT I ++ AL++ ++M H + TY TL+
Sbjct: 577 EARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLV 636
Query: 323 KARSKYGSVLEVQQCL 338
K G + E + +
Sbjct: 637 DTLGKKGRIAEATELM 652
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 81/379 (21%), Positives = 147/379 (38%), Gaps = 59/379 (15%)
Query: 12 LNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYST 71
+ + + M + G PD SY ++ C R+ +D+ K++ L D TY+T
Sbjct: 332 IELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHG---LVPDQVTYNT 388
Query: 72 IIKVF-----ADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEE 126
+I + AD LW + D + G ++ + +S++++A G + +A L E
Sbjct: 389 LIHMLTKHDHADEALWFLK-----DAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINE 443
Query: 127 MLLAG-CEPNTQCFNIILHACVEACQYDRAFRFF-----HSWKGNKMLGSFGEGYNSNLK 180
ML G C P+ + +++ + D+A + H K N + S+ N +
Sbjct: 444 MLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTV--SYTALLNGMCR 501
Query: 181 QGSIHNATTV----------PNGFSNSQILSFTER----------------FPFTPTTST 214
G A + PN + S I+ R F P
Sbjct: 502 TGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVE 561
Query: 215 YNTLLKACGSD--YYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMG 272
N LL++ D + A+ + E G + N + ++ +I + ++ A+ +L M
Sbjct: 562 INLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMY 621
Query: 273 DAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVL 332
DV YTT + + +A L ++M I P VTY T++ + G V
Sbjct: 622 LINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVD 681
Query: 333 EV----------QQCLAIY 341
++ Q+C IY
Sbjct: 682 DLVAILEKMISRQKCRTIY 700
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 73/155 (47%), Gaps = 6/155 (3%)
Query: 198 QILSFTERFPFTPTTSTYNTLLKACGSDYYHAKAL--INEMKTVGLSPNQITWSILIDIC 255
++L+ +R P NT + KAL + M+ VG+ PN +T++ +I
Sbjct: 263 KVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGY 322
Query: 256 GGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEM-KSCEIHPN 314
VE AIE+L+ M G PD ++Y T + + K + L ++M K + P+
Sbjct: 323 CDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPD 382
Query: 315 WVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGY 349
VTYNTL+ +K+ + L +D Q+ G+
Sbjct: 383 QVTYNTLIHMLTKHD---HADEALWFLKDAQEKGF 414
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/333 (22%), Positives = 146/333 (43%), Gaps = 21/333 (6%)
Query: 18 MQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFA 77
M+ LGL P ++YN L+K +AG+ + + ++ +L E + ++ T++ +++ +
Sbjct: 141 MKELGLNPTTSTYNTLIKGYGIAGKPERSSELL-DLMLEEGNVDVGPNIRTFNVLVQAWC 199
Query: 78 DAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAG-LVEQAIQLFEEMLLA-GCEPN 135
K + A +V M GV +TV ++++ G V ++ E+M++ +PN
Sbjct: 200 KKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPN 259
Query: 136 TQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFS 195
+ I++ + RF K ++ +NL + N ++ NGF
Sbjct: 260 GRTCGIVVGGYCREGRVRDGLRFVRRMKEMRV--------EANL---VVFN--SLINGFV 306
Query: 196 NSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKALINEMKTVGLSPNQITWSILIDIC 255
+ T ++N ++ G+ + L MK + + IT+S +++
Sbjct: 307 EVMDRDGIDEVTLTLLLMSFNEEVELVGNQKMKVQVL-TLMKECNVKADVITYSTVMNAW 365
Query: 256 GGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNW 315
+E A ++ K M AG+KPD AY+ K V +K K+A L E + E PN
Sbjct: 366 SSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETL-IVESRPNV 424
Query: 316 VTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAG 348
V + T++ GS + + ++ M K G
Sbjct: 425 VIFTTVISGWCSNGS---MDDAMRVFNKMCKFG 454
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 119/277 (42%), Gaps = 43/277 (15%)
Query: 24 KPDMTSYNILLKACCVAGRVDLAQDMYKELKHL-----------------ESVGRLKLDV 66
KP+ + I++ C GRV + +K + E + R +D
Sbjct: 257 KPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDE 316
Query: 67 FTYSTIIKVF-ADAKL---WQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQ 122
T + ++ F + +L +M ++V M+ V + + +S+++NA + AG +E+A Q
Sbjct: 317 VTLTLLLMSFNEEVELVGNQKMKVQVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQ 376
Query: 123 LFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFF-----HSWKGNKMLGSFGEGYNS 177
+F+EM+ AG +P+ ++I+ V A + +A S + + G+ S
Sbjct: 377 VFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVESRPNVVIFTTVISGWCS 436
Query: 178 NLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKAC--GSDYYHAKALINE 235
N GS+ +A V N +F +P T+ TL+ + A+ ++
Sbjct: 437 N---GSMDDAMRVFNKMC---------KFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQM 484
Query: 236 MKTVGLSPNQITWSILID---ICGGTENVEGAIEILK 269
M+ G+ P T+ +L + + G T+ AI LK
Sbjct: 485 MRGCGVKPENSTFLLLAEAWRVAGLTDESNKAINALK 521
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 72/347 (20%), Positives = 140/347 (40%), Gaps = 59/347 (17%)
Query: 41 GRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLN 100
GR AQ ++K L E+ R L +Y+T++ K + + ++ +G L+
Sbjct: 59 GRPHEAQTVFKTLA--ETGHRPSL--ISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLD 114
Query: 101 TVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFH 160
++ ++++INA + +G +E A+Q +M G P T +N ++ A + +R+
Sbjct: 115 SIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLD 174
Query: 161 SW--KGNKMLGSFGEGYNSNL----KQGSIHNATTVPNGFSNSQILSFTERFPFTPTTST 214
+GN +G +N + K+ + A +++ E P T T
Sbjct: 175 LMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAW---------EVVKKMEECGVRPDTVT 225
Query: 215 YNTLLKAC----GSDYYHAKALINEM-KTVGLSPNQITWSILIDICGGTENVEGAIEILK 269
YNT + C G ++ +M PN T I++ V + ++
Sbjct: 226 YNT-IATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVR 284
Query: 270 SMGDAGIKPDVIAYTTAIKVCVE----------------------------SKNFKQALT 301
M + ++ +++ + + I VE K Q LT
Sbjct: 285 RMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVTLTLLLMSFNEEVELVGNQKMKVQVLT 344
Query: 302 LYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAG 348
L MK C + + +TY+T++ A S G + + Q ++++M KAG
Sbjct: 345 L---MKECNVKADVITYSTVMNAWSSAGYMEKAAQ---VFKEMVKAG 385
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 129/309 (41%), Gaps = 29/309 (9%)
Query: 22 GLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKL 81
G K ++Y LL++C +G + L + ++ + DVF + ++ ++A
Sbjct: 76 GSKVKRSTYLKLLESCIDSGSIHLGRILHARFGLFT-----EPDVFVETKLLSMYAKCGC 130
Query: 82 WQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNI 141
A KV MR N WS++I A + + +LF M+ G P+ F
Sbjct: 131 IADARKVFDSMRER----NLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPK 186
Query: 142 ILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNL----KQGSIHNATTVPNGFSNS 197
IL C C A + HS + S NS L K G + AT
Sbjct: 187 ILQGCAN-CGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRER 245
Query: 198 QILSFTERFPFTPTTSTYNTLLKACGSDYYHAKA--LINEMKTVGLSPNQITWSILIDIC 255
+++ +N++L A + H +A L+ EM+ G+SP +TW+ILI
Sbjct: 246 DVIA-------------WNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGY 292
Query: 256 GGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNW 315
+ A+++++ M GI DV +T I + + QAL ++ +M + PN
Sbjct: 293 NQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNA 352
Query: 316 VTYNTLLKA 324
VT + + A
Sbjct: 353 VTIMSAVSA 361
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 70/310 (22%), Positives = 129/310 (41%), Gaps = 40/310 (12%)
Query: 26 DMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMA 85
D+ ++N ++ C AG A +++ ++ L+ ++ T++T+I + A
Sbjct: 417 DVYTWNSMITGYCQAGYCGKAYELFTRMQD----ANLRPNIITWNTMISGYIKNGDEGEA 472
Query: 86 LKVKHDMRSAG-VNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILH 144
+ + M G V NT W+ +I G ++A++LF +M + PN+ +L
Sbjct: 473 MDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLP 532
Query: 145 AC-----------VEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNG 193
AC + C R H+ K N + ++ K G I + T+ G
Sbjct: 533 ACANLLGAKMVREIHGCVLRRNLDAIHAVK-NALTDTYA-------KSGDIEYSRTIFLG 584
Query: 194 FSNSQILSFTERFPFTPTTSTYNTLLKA--CGSDYYHAKALINEMKTVGLSPNQITWSIL 251
I+ T+N+L+ Y A AL N+MKT G++PN+ T S +
Sbjct: 585 METKDII-------------TWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSI 631
Query: 252 IDICGGTENVEGAIEILKSMG-DAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCE 310
I G NV+ ++ S+ D I P + + + + + ++AL +EM
Sbjct: 632 ILAHGLMGNVDEGKKVFYSIANDYHIIPALEHCSAMVYLYGRANRLEEALQFIQEMNIQS 691
Query: 311 IHPNWVTYNT 320
P W ++ T
Sbjct: 692 ETPIWESFLT 701
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 75/352 (21%), Positives = 149/352 (42%), Gaps = 47/352 (13%)
Query: 14 IYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTII 73
++++M G+ PD + +L+ C G V+ + ++ + L L++ ++I+
Sbjct: 168 LFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVS----NSIL 223
Query: 74 KVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCE 133
V+A A K MR V +AW+S++ A G E+A++L +EM G
Sbjct: 224 AVYAKCGELDFATKFFRRMRERDV----IAWNSVLLAYCQNGKHEEAVELVKEMEKEGIS 279
Query: 134 PNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYN----SNLKQGSIHNATT 189
P +NI++ + + D A + +FG + + + G IHN
Sbjct: 280 PGLVTWNILIGGYNQLGKCDAAMDLMQK------METFGITADVFTWTAMISGLIHN--- 330
Query: 190 VPNGFSNSQILSFTERF--PFTPTTSTYNTLLKAC--------GSDYYHAKALINEMKTV 239
G + F + F P T + + AC GS+ H+ A+ +
Sbjct: 331 ---GMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEV-HSIAV-----KM 381
Query: 240 GLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQA 299
G + + + L+D+ +E A ++ S+ + DV + + I ++ +A
Sbjct: 382 GFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNK----DVYTWNSMITGYCQAGYCGKA 437
Query: 300 LTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYVR 351
L+ M+ + PN +T+NT++ K G + + + ++Q M+K G V+
Sbjct: 438 YELFTRMQDANLRPNIITWNTMISGYIKNG---DEGEAMDLFQRMEKDGKVQ 486
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/321 (20%), Positives = 131/321 (40%), Gaps = 52/321 (16%)
Query: 14 IYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTII 73
++ I +G D+ N L+ G+++ A+ ++ +K+ DV+T++++I
Sbjct: 374 VHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNK--------DVYTWNSMI 425
Query: 74 KVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAG-C 132
+ A A ++ M+ A + N + W+++I+ G +A+ LF+ M G
Sbjct: 426 TGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKV 485
Query: 133 EPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPN 192
+ NT +N+I+ ++ + D A F + ++
Sbjct: 486 QRNTATWNLIIAGYIQNGKKDEALELFRKMQFSR-------------------------- 519
Query: 193 GFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKALINEMKTVGLSPNQITWSILI 252
F P + T +LL AC ++ AK ++ E+ L N +
Sbjct: 520 ---------------FMPNSVTILSLLPAC-ANLLGAK-MVREIHGCVLRRNLDAIHAVK 562
Query: 253 DICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIH 312
+ T G IE +++ D+I + + I V ++ AL L+ +MK+ I
Sbjct: 563 NALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGIT 622
Query: 313 PNWVTYNTLLKARSKYGSVLE 333
PN T ++++ A G+V E
Sbjct: 623 PNRGTLSSIILAHGLMGNVDE 643
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 124/269 (46%), Gaps = 27/269 (10%)
Query: 18 MQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFA 77
M GLKP ++Y++LL + +D + ++ + ++ D+ ++++ ++A
Sbjct: 457 MVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIA--KTTACYDPDLILQNSLVSMYA 514
Query: 78 DAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQ 137
A++ +++ + V +TV+W+S+I +H GL ++A+ LF+EML +G +PN+
Sbjct: 515 KCG----AIEDAYEIFAKMVQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSV 570
Query: 138 CFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNS 197
F +L AC + R F + K E Y+ Q I + ++ + +
Sbjct: 571 TFLGVLSACSHSGLITRGLELFKAMK---------ETYSI---QPGIDHYISMIDLLGRA 618
Query: 198 QILSFTERF----PFTPTTSTYNTLLKACGSDYYHAKAL-INE---MKTVGLSP-NQITW 248
L E F PFTP + Y LL CG ++ A I E M+ + L P N
Sbjct: 619 GKLKEAEEFISALPFTPDHTVYGALLGLCGLNWRDKDAEGIAERAAMRLLELDPVNAPGH 678
Query: 249 SILIDICGGTENVEGAIEILKSMGDAGIK 277
L ++ G + E+ K MG G+K
Sbjct: 679 VALCNVYAGLGRHDMEKEMRKEMGIKGVK 707
>AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587613-23588220 FORWARD
LENGTH=152
Length = 152
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 78/145 (53%), Gaps = 5/145 (3%)
Query: 205 RFPFTPTTSTYNTLLKA-CGSDYYH-AKALINEMKTVGLSPNQITWSILIDICGGTENVE 262
R+ PTT TYN+++ C D AK +++ M + G SP+ +T+S LI+ + V+
Sbjct: 3 RWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVD 62
Query: 263 GAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLL 322
+EI M GI + + YTT I + + A L EM SC + P+++T++ +L
Sbjct: 63 NGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCML 122
Query: 323 KARSKYGSVLEVQQCLAIYQDMQKA 347
+ S E+++ AI +D+QK+
Sbjct: 123 ---AGLCSKKELRKAFAILEDLQKS 144
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 63/132 (47%), Gaps = 4/132 (3%)
Query: 25 PDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQM 84
P +YN ++ C RVD A+ M L + S G DV T+ST+I + AK
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRM---LDSMASKG-CSPDVVTFSTLINGYCKAKRVDN 63
Query: 85 ALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILH 144
+++ +M G+ NTV +++LI+ G ++ A L EM+ G P+ F+ +L
Sbjct: 64 GMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLA 123
Query: 145 ACVEACQYDRAF 156
+ +AF
Sbjct: 124 GLCSKKELRKAF 135
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/340 (22%), Positives = 143/340 (42%), Gaps = 19/340 (5%)
Query: 8 LTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVF 67
L L+++ M G+ P++ S+N+++ C G + A + ++ + S + +
Sbjct: 234 LFEALSVFYRMLKCGVWPNVVSFNMMIDGACKTGDMRFALQLLGKMGMM-SGNFVSPNAV 292
Query: 68 TYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEM 127
TY+++I F A +A +++ DM +GV+ N + +L++A AG ++A++L +EM
Sbjct: 293 TYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEM 352
Query: 128 LLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKM-LGSFGEG--YNSNLKQGSI 184
G NT +N I++ + A M + F + + G +
Sbjct: 353 TSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYV 412
Query: 185 HNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKA--LINEMKTVGLS 242
A S +++ +NTL+ D A A ++ M GLS
Sbjct: 413 KEAVEFQRQISEKKLVE---------DIVCHNTLMHHFVRDKKLACADQILGSMLVQGLS 463
Query: 243 PNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTL 302
+ I++ LID +E A+EI M +++ Y + + + A +
Sbjct: 464 LDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAEAV 523
Query: 303 YEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQ 342
M+ +I VTYNTLL K G+V E L+ Q
Sbjct: 524 VNAMEIKDI----VTYNTLLNESLKTGNVEEADDILSKMQ 559
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 74/317 (23%), Positives = 132/317 (41%), Gaps = 33/317 (10%)
Query: 19 QNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFAD 78
Q G PD+ ++ L++AC G AQ Y+ ++ + G + V + + +
Sbjct: 142 QACGSSPDV--FDSLVRACTQNGD---AQGAYEVIEQTRAEG-FCVSVHALNNFMGCLLN 195
Query: 79 AKLWQMALKVKHDMRSAGVNLNTVAWSSLINA-CAHAGLVEQAIQLFEEMLLAGCEPNTQ 137
KV +M S G N ++ +I + C + L E A+ +F ML G PN
Sbjct: 196 VNEIDRFWKVYKEMDSLGYVENVNTFNLVIYSFCKESKLFE-ALSVFYRMLKCGVWPNVV 254
Query: 138 CFNIILHACVEACQY-DRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSN 196
FN+++ AC+ D F ++LG G + N + +V NGF
Sbjct: 255 SFNMMIDG---ACKTGDMRFAL-------QLLGKMGM-MSGNFVSPNAVTYNSVINGFCK 303
Query: 197 SQILSFTERFPFTPTTS-------TYNTLLKACG----SDYYHAKALINEMKTVGLSPNQ 245
+ L ER S TY L+ A G SD A L +EM + GL N
Sbjct: 304 AGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSD--EALRLCDEMTSKGLVVNT 361
Query: 246 ITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEE 305
+ ++ ++ ++EGA+ +L+ M ++ D ++ + K+A+ +
Sbjct: 362 VIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQ 421
Query: 306 MKSCEIHPNWVTYNTLL 322
+ ++ + V +NTL+
Sbjct: 422 ISEKKLVEDIVCHNTLM 438
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 72/369 (19%), Positives = 155/369 (42%), Gaps = 62/369 (16%)
Query: 7 DLTYTLNIYQIMQNLGL------KPDMTSYNILLKACCVAGRVDLAQDMYKELKH----- 55
D+ + L Q++ +G+ P+ +YN ++ C AGR+DLA+ + ++
Sbjct: 268 DMRFAL---QLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDC 324
Query: 56 --------LESVGR------------------LKLDVFTYSTIIK-VFADAKLWQMALKV 88
+++ GR L ++ Y++I+ +F + + + A+ V
Sbjct: 325 NERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDI-EGAMSV 383
Query: 89 KHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVE 148
DM S + ++ + ++ G V++A++ ++ + C N ++H V
Sbjct: 384 LRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVR 443
Query: 149 ACQYDRAFRFFHSW--KGNKMLG-SFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTER 205
+ A + S +G + SFG + LK+G + A + +G +
Sbjct: 444 DKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMI---------K 494
Query: 206 FPFTPTTSTYNTLLKACGSDYY--HAKALINEMKTVGLSPNQITWSILIDICGGTENVEG 263
T YN+++ A+A++N M+ + +T++ L++ T NVE
Sbjct: 495 MNKTSNLVIYNSIVNGLSKRGMAGAAEAVVNAMEI----KDIVTYNTLLNESLKTGNVEE 550
Query: 264 AIEILKSM--GDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTL 321
A +IL M D ++ + I + ++++A + + M + P+ +TY TL
Sbjct: 551 ADDILSKMQKQDGEKSVSLVTFNIMINHLCKFGSYEKAKEVLKFMVERGVVPDSITYGTL 610
Query: 322 LKARSKYGS 330
+ + SK+ S
Sbjct: 611 ITSFSKHRS 619
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/317 (21%), Positives = 147/317 (46%), Gaps = 21/317 (6%)
Query: 12 LNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYST 71
IY+ M+ D ++Y +++ + +GR+D A +++++K +L+ +S+
Sbjct: 298 FEIYESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKE----RKLRPSFSVFSS 353
Query: 72 IIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAG 131
++ A ++KV +M+ G + + SLI++ A AG ++ A++L++EM +G
Sbjct: 354 LVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSG 413
Query: 132 CEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLK----QGSIHNA 187
PN + +I+ + ++ + + A F + L + Y+ L+ G + +A
Sbjct: 414 FRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFLPT-PSTYSCLLEMHAGSGQVDSA 472
Query: 188 TTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYY--HAKALINEMKTVGLSPNQ 245
+ N +N+ + P S+Y +LL + A ++ EMK +G S +
Sbjct: 473 MKIYNSMTNAGL---------RPGLSSYISLLTLLANKRLVDVAGKILLEMKAMGYSVDV 523
Query: 246 ITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEE 305
+L+ I +V+ A++ L+ MG +GIK + + C+++ + A L E
Sbjct: 524 CASDVLM-IYIKDASVDLALKWLRFMGSSGIKTNNFIIRQLFESCMKNGLYDSARPLLET 582
Query: 306 MKSCEIHPNWVTYNTLL 322
+ + V Y ++L
Sbjct: 583 LVHSAGKVDLVLYTSIL 599
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/297 (21%), Positives = 123/297 (41%), Gaps = 49/297 (16%)
Query: 15 YQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIK 74
++ Q G K D +YN L+ G A ++Y+ ++ +S+ LD TY II
Sbjct: 266 FKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESMEKTDSL----LDGSTYELIIP 321
Query: 75 VFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEP 134
A + A K+ M+ + + +SSL+++ AG ++ +++++ EM G P
Sbjct: 322 SLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRP 381
Query: 135 NTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFG---EGYNSNLKQGSIHNATTVP 191
+ F ++ + +A + D A R + K + +FG S+ K G + A TV
Sbjct: 382 SATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTV- 440
Query: 192 NGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKALINEMKTVGLSPNQITWSIL 251
+M+ G P T+S L
Sbjct: 441 -----------------------------------------FKDMEKAGFLPTPSTYSCL 459
Query: 252 IDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKS 308
+++ G+ V+ A++I SM +AG++P + +Y + + + + A + EMK+
Sbjct: 460 LEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYISLLTLLANKRLVDVAGKILLEMKA 516
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 123/279 (44%), Gaps = 11/279 (3%)
Query: 47 QDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSS 106
Q +++E+ +S L Y+ +I+ A A+ ++A + +G ++T +++
Sbjct: 225 QSLFEEMVQ-DSSSHGDLSFNAYNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNN 283
Query: 107 LINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNK 166
L+ + GL +A +++E M + + +I+ + ++ + D AF+ F K K
Sbjct: 284 LMMLFLNKGLPYKAFEIYESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERK 343
Query: 167 MLGSFG---EGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACG 223
+ SF +S K G + + V ++ F R T S ++ KA
Sbjct: 344 LRPSFSVFSSLVDSMGKAGRLDTSMKV-----YMEMQGFGHRPSATMFVSLIDSYAKAGK 398
Query: 224 SDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAY 283
D A L +EMK G PN ++++I+ + +E A+ + K M AG P Y
Sbjct: 399 LD--TALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTY 456
Query: 284 TTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLL 322
+ +++ S A+ +Y M + + P +Y +LL
Sbjct: 457 SCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYISLL 495
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 63/122 (51%), Gaps = 3/122 (2%)
Query: 229 AKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIK 288
A L +MK L P+ +S L+D G ++ ++++ M G +P + + I
Sbjct: 332 AFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLID 391
Query: 289 VCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAG 348
++ AL L++EMK PN+ Y ++++ +K G LEV + +++DM+KAG
Sbjct: 392 SYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGK-LEV--AMTVFKDMEKAG 448
Query: 349 YV 350
++
Sbjct: 449 FL 450
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 63/132 (47%), Gaps = 4/132 (3%)
Query: 8 LTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVF 67
L ++ +Y MQ G +P T + L+ + AG++D A ++ E+K + +
Sbjct: 364 LDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKK----SGFRPNFG 419
Query: 68 TYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEM 127
Y+ II+ A + ++A+ V DM AG +S L+ A +G V+ A++++ M
Sbjct: 420 LYTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSM 479
Query: 128 LLAGCEPNTQCF 139
AG P +
Sbjct: 480 TNAGLRPGLSSY 491
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 115/257 (44%), Gaps = 22/257 (8%)
Query: 22 GLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKL 81
G+ PD ++N+++ C AG V+ A+ + +K +V+ YS ++ F
Sbjct: 263 GISPDPVTFNVMINGFCRAGEVERAKKILDFMKK----NGCNPNVYNYSALMNGFCKVGK 318
Query: 82 WQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNI 141
Q A + +++ G+ L+TV +++L+N G ++A++L EM + C +T +N+
Sbjct: 319 IQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNV 378
Query: 142 ILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGS---IHNATTVPNGFSNS- 197
IL + + A + W GS G +L +GS I NA +
Sbjct: 379 ILRGLSSEGRSEEALQMLDQW------GSEG----VHLNKGSYRIILNALCCNGELEKAV 428
Query: 198 QILSFTERFPFTPTTSTYNTL-LKACGSDYYH--AKALINEMKTVGLSPNQITWSILIDI 254
+ LS P +T+N L ++ C S Y + LI ++ +GL P +W +++
Sbjct: 429 KFLSVMSERGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLR-IGLIPGPKSWGAVVES 487
Query: 255 CGGTENVEGAIEILKSM 271
+ E+L S+
Sbjct: 488 ICKERKLVHVFELLDSL 504
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 82/349 (23%), Positives = 145/349 (41%), Gaps = 35/349 (10%)
Query: 6 RDLTYTLNIY-QIMQNLGLKPDMTSYNILLKACC-----VAGRVDLAQDMYKELKHLESV 59
RD L+I+ + Q G + +Y++LL +A L Q Y+ + ES+
Sbjct: 67 RDPQGVLDIFNKASQQKGFNHNNATYSVLLDNLVRHKKFLAVDAILHQMKYETCRFQESL 126
Query: 60 GRLKLDVFTYSTI-IKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVE 118
+ F+ S + KV L Q+ +VK + + LN + S +N +
Sbjct: 127 FLNLMRHFSRSDLHDKVMEMFNLIQVIARVKPSLNAISTCLNLLIDSGEVN-------LS 179
Query: 119 QAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSN 178
+ + L+ + L G +PNT FNI++ + + AF K + G Y
Sbjct: 180 RKLLLYAKHNL-GLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRS------GISY--- 229
Query: 179 LKQGSIHNATTVPNGFSNSQILSFTERFP-------FTPTTSTYNTLLKA-C-GSDYYHA 229
SI +T + F++S+ E F +P T+N ++ C + A
Sbjct: 230 --PNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERA 287
Query: 230 KALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKV 289
K +++ MK G +PN +S L++ ++ A + + G+K D + YTT +
Sbjct: 288 KKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNC 347
Query: 290 CVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCL 338
+ +A+ L EMK+ + +TYN +L+ S G E Q L
Sbjct: 348 FCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQML 396
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/325 (23%), Positives = 136/325 (41%), Gaps = 55/325 (16%)
Query: 30 YNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVK 89
YN LL + G V+ + +Y E+ LE + + D++T++T++ + A +
Sbjct: 123 YNNLLSSLARFGLVEEMKRLYTEM--LEDL--VSPDIYTFNTLVNGYCKLGYVVEAKQYV 178
Query: 90 HDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEA 149
+ AG + + ++S I V+ A ++F+EM GC N + +++ EA
Sbjct: 179 TWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEA 238
Query: 150 CQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFT 209
+ D A K +
Sbjct: 239 KKIDEALSLLVKMKDDNC-----------------------------------------C 257
Query: 210 PTTSTYNTLLKA-CGS-DYYHAKALINEMKTVGLSPNQITWSILI-DICGGTENVEGAIE 266
P TY L+ A CGS A L +M G+ P+ +++LI C G + ++ A
Sbjct: 258 PNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSG-DTLDEASG 316
Query: 267 ILKSMGDAGIKPDVIAYTTAIK-VCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKAR 325
+L+ M + G+ P+VI Y IK C KN +A+ L +M + P+ +TYNTL+ +
Sbjct: 317 LLEHMLENGLMPNVITYNALIKGFC--KKNVHKAMGLLSKMLEQNLVPDLITYNTLIAGQ 374
Query: 326 SKYGSVLEVQQCLAIYQDMQKAGYV 350
G++ + L++ M+++G V
Sbjct: 375 CSSGNLDSAYRLLSL---MEESGLV 396
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 119/275 (43%), Gaps = 32/275 (11%)
Query: 16 QIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKV 75
+++++L + PD+ ++N L+ C G V A+ L D FTY++ I
Sbjct: 145 EMLEDL-VSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQ----AGCDPDYFTYTSFITG 199
Query: 76 FADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPN 135
K A KV +M G + N V+++ LI A +++A+ L +M C PN
Sbjct: 200 HCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPN 259
Query: 136 TQCFNIILHACVEACQYDRAFRFFH--SWKGNK--------MLGSFGEGYNSNLKQGSIH 185
+ + +++ A + Q A F S G K ++ SF G + G +
Sbjct: 260 VRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLE 319
Query: 186 NATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKA-CGSDYYHAKALINEMKTVGLSPN 244
+ + NG P TYN L+K C + + A L+++M L P+
Sbjct: 320 HM--LENG--------------LMPNVITYNALIKGFCKKNVHKAMGLLSKMLEQNLVPD 363
Query: 245 QITWSILIDICGGTENVEGAIEILKSMGDAGIKPD 279
IT++ LI + N++ A +L M ++G+ P+
Sbjct: 364 LITYNTLIAGQCSSGNLDSAYRLLSLMEESGLVPN 398
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 122/298 (40%), Gaps = 42/298 (14%)
Query: 32 ILLKACCVAGRVDLAQDMYKELKHLESVG-RLKLDVFTYSTIIKVFADAKLWQMALKVKH 90
+++K+C D + ++ +S + KL Y+ ++ A L + ++
Sbjct: 85 LMIKSCNSVRDALFVVDFCRTMRKGDSFEIKYKLTPKCYNNLLSSLARFGLVEEMKRLYT 144
Query: 91 DMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEAC 150
+M V+ + +++L+N G V +A Q ++ AGC+P+ + +
Sbjct: 145 EMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRK 204
Query: 151 QYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTP 210
+ D AF+ F + Q H N S +Q++
Sbjct: 205 EVDAAFKVFKE-----------------MTQNGCHR-----NEVSYTQLIY--------- 233
Query: 211 TTSTYNTLLKACGSDYYHAKALINEMKTVGLSPNQITWSILID-ICGGTENVEGAIEILK 269
L +A D A +L+ +MK PN T+++LID +CG + E A+ + K
Sbjct: 234 ------GLFEAKKID--EALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSE-AMNLFK 284
Query: 270 SMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSK 327
M ++GIKPD YT I+ +A L E M + PN +TYN L+K K
Sbjct: 285 QMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCK 342
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 122/272 (44%), Gaps = 36/272 (13%)
Query: 59 VGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVE 118
VG LD++T ++ DA+L AL+ ++D V+W++LI A E
Sbjct: 198 VGSALLDLYTRYGLMD---DAQLVFDALESRND----------VSWNALIAGHARRSGTE 244
Query: 119 QAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSW---KGNKMLGSFGEGY 175
+A++LF+ ML G P+ + + AC ++ ++ H++ G K++ G
Sbjct: 245 KALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQG-KWVHAYMIKSGEKLVAFAGNTL 303
Query: 176 -NSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKAL-- 232
+ K GSIH+A + + + ++S +N+LL A + +A+
Sbjct: 304 LDMYAKSGSIHDARKIFDRLAKRDVVS-------------WNSLLTAYAQHGFGKEAVWW 350
Query: 233 INEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVE 292
EM+ VG+ PN+I++ ++ C + ++ + M GI P+ Y T + +
Sbjct: 351 FEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGR 410
Query: 293 SKNFKQALTLYEEMKSCEIHPNWVTYNTLLKA 324
+ + +AL EEM I P + LL A
Sbjct: 411 AGDLNRALRFIEEMP---IEPTAAIWKALLNA 439
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 115/277 (41%), Gaps = 32/277 (11%)
Query: 11 TLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYS 70
L ++Q M G +P SY L AC G ++ + ++ ++ G KL F +
Sbjct: 246 ALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHA---YMIKSGE-KLVAFAGN 301
Query: 71 TIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLA 130
T++ ++A + A K+ + + V+W+SL+ A A G ++A+ FEEM
Sbjct: 302 TLLDMYAKSGSIHDARKIFDRL----AKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRV 357
Query: 131 GCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTV 190
G PN F +L AC + D + ++ K + G E + H T V
Sbjct: 358 GIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKD---GIVPEAW---------HYVTVV 405
Query: 191 P---NGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDY-----YHAKALINEMKTVGLS 242
++ L F E P PT + + LL AC +A + E+
Sbjct: 406 DLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPG 465
Query: 243 PNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPD 279
P+ I ++I GG N A + K M ++G+K +
Sbjct: 466 PHVILYNIY--ASGGRWN--DAARVRKKMKESGVKKE 498
>AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29087145-29088521 FORWARD
LENGTH=458
Length = 458
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 126/307 (41%), Gaps = 50/307 (16%)
Query: 36 ACCVAGRVDLAQ--DMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMR 93
AC +A D D +++ E+ G+ + + + ++K + + AL + M+
Sbjct: 134 ACLLAKGNDFKGLWDFLRQVSRREN-GKNVVTTASITCLMKCLGEEGFVKEALATFYRMK 192
Query: 94 SAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCE--PNTQCFNIILHACVEACQ 151
+ A++++INA G ++A L ++M L G P+T + I++ + C+
Sbjct: 193 EYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTILISS---YCR 249
Query: 152 Y------DRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTER 205
Y +A R W+ N+M + L +G
Sbjct: 250 YGMQTGCRKAIRR-RMWEANRM-------FREMLFRG----------------------- 278
Query: 206 FPFTPTTSTYNTLLKACGSDYYHAKAL--INEMKTVGLSPNQITWSILIDICGGTENVEG 263
F P TYN L+ C +AL +MKT G PNQ+T++ I T +EG
Sbjct: 279 --FVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEG 336
Query: 264 AIEILKSMGDAGIK-PDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLL 322
AIE++++M G P YT I VE++ +A L EM + P TY +
Sbjct: 337 AIEMMRTMKKLGHGVPGSSTYTPLIHALVETRRAAEARDLVVEMVEAGLVPREYTYKLVC 396
Query: 323 KARSKYG 329
A S G
Sbjct: 397 DALSSEG 403
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 82/174 (47%), Gaps = 20/174 (11%)
Query: 193 GFSNSQILSF--TERFPFTPTTSTYNTLLKA-CG-SDYYHAKALINEMKTVGL--SPNQI 246
GF + +F + + P YNT++ A C ++ A+ L+++M+ G P+
Sbjct: 179 GFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTY 238
Query: 247 TWSILID-IC--GGTENVEGAIE--------ILKSMGDAGIKPDVIAYTTAIKVCVESKN 295
T++ILI C G AI + + M G PDV+ Y I C ++
Sbjct: 239 TYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNR 298
Query: 296 FKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGY 349
+AL L+E+MK+ PN VTYN+ ++ Y E++ + + + M+K G+
Sbjct: 299 IGRALELFEDMKTKGCVPNQVTYNSFIRY---YSVTNEIEGAIEMMRTMKKLGH 349
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/257 (21%), Positives = 98/257 (38%), Gaps = 59/257 (22%)
Query: 12 LNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVG-RLKLDVFTYS 70
L + M+ KPD+ +YN ++ A C G A+ + L ++ G R D +TY+
Sbjct: 185 LATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFL---LDQMQLPGFRYPPDTYTYT 241
Query: 71 TIIKVFAD------------AKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVE 118
+I + ++W+ A ++ +M G + V ++ LI+ C +
Sbjct: 242 ILISSYCRYGMQTGCRKAIRRRMWE-ANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIG 300
Query: 119 QAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSN 178
+A++LFE+M GC PN +N + + + A + K G G
Sbjct: 301 RALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMK------KLGHG---- 350
Query: 179 LKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKA--LINEM 236
P +STY L+ A A+A L+ EM
Sbjct: 351 ------------------------------VPGSSTYTPLIHALVETRRAAEARDLVVEM 380
Query: 237 KTVGLSPNQITWSILID 253
GL P + T+ ++ D
Sbjct: 381 VEAGLVPREYTYKLVCD 397
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/323 (22%), Positives = 134/323 (41%), Gaps = 53/323 (16%)
Query: 11 TLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYS 70
L +Y MQ + PD ++ LLKAC + + + ++ ++ L DVF +
Sbjct: 103 ALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLG----FDADVFVQN 158
Query: 71 TIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLA 130
+I ++A + A V + V+W+++++A A G +A+++F +M
Sbjct: 159 GLIALYAKCRRLGSARTVFEGLPLP--ERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKM 216
Query: 131 GCEPNTQCFNIILHA--CVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNAT 188
+P+ +L+A C++ +LKQG +A+
Sbjct: 217 DVKPDWVALVSVLNAFTCLQ-----------------------------DLKQGRSIHAS 247
Query: 189 TVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKALINEMKTVGLSPNQITW 248
V G L + NT+ CG AK L ++MK SPN I W
Sbjct: 248 VVKMGLEIEPDLLIS-----------LNTMYAKCGQ-VATAKILFDKMK----SPNLILW 291
Query: 249 SILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKS 308
+ +I AI++ M + ++PD I+ T+AI C + + +QA ++YE +
Sbjct: 292 NAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGR 351
Query: 309 CEIHPNWVTYNTLLKARSKYGSV 331
+ + + L+ +K GSV
Sbjct: 352 SDYRDDVFISSALIDMFAKCGSV 374
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 70/159 (44%), Gaps = 12/159 (7%)
Query: 11 TLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGR--LKLDVFT 68
++++ M N ++PD S + AC G ++ A+ MY E VGR + DVF
Sbjct: 307 AIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMY------EYVGRSDYRDDVFI 360
Query: 69 YSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEML 128
S +I +FA + A V ++ + V WS++I G +AI L+ M
Sbjct: 361 SSALIDMFAKCGSVEGARLVF----DRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAME 416
Query: 129 LAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKM 167
G PN F +L AC + + FF+ +K+
Sbjct: 417 RGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKI 455
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 122/286 (42%), Gaps = 17/286 (5%)
Query: 54 KHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINA-CA 112
KH S L ++FTY +IKV+A+AKL + L + M + +++ +
Sbjct: 109 KHRSSGYPLTGEIFTY--LIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVS 166
Query: 113 HAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKML---G 169
H G +++A +LF+ L G PNT+ +N+++ A A++ F ++
Sbjct: 167 HRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVD 226
Query: 170 SFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKAC--GSDYY 227
S+ ++G ++ A + + N F P +Y TLL + +
Sbjct: 227 SYKILIQGFCRKGQVNGAMELLDDMLNKG---------FVPDRLSYTTLLNSLCRKTQLR 277
Query: 228 HAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAI 287
A L+ MK G +P+ + ++ +I + A ++L M G P+ ++Y T I
Sbjct: 278 EAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLI 337
Query: 288 KVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLE 333
+ F + EEM S P++ N L+K +G V E
Sbjct: 338 GGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEE 383
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 95/249 (38%), Gaps = 44/249 (17%)
Query: 93 RSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQY 152
RS+G L ++ LI A A L E+ + F +ML P + N IL V Y
Sbjct: 111 RSSGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGY 170
Query: 153 -DRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPT 211
+AF F S + +H P
Sbjct: 171 LQKAFELFKSSR--------------------LHGVM---------------------PN 189
Query: 212 TSTYNTLLKA--CGSDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILK 269
T +YN L++A D A L +M + P+ ++ ILI V GA+E+L
Sbjct: 190 TRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLD 249
Query: 270 SMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYG 329
M + G PD ++YTT + ++A L MK +P+ V YNT++ +
Sbjct: 250 DMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCRED 309
Query: 330 SVLEVQQCL 338
++ ++ L
Sbjct: 310 RAMDARKVL 318
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 70/134 (52%), Gaps = 7/134 (5%)
Query: 22 GLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKL 81
G+ P+ SYN+L++A C+ + +A ++ ++ + V DV +Y +I+ F
Sbjct: 185 GVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVP----DVDSYKILIQGFCRKGQ 240
Query: 82 WQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNI 141
A+++ DM + G + +++++L+N+ + +A +L M L GC P+ +N
Sbjct: 241 VNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNT 300
Query: 142 ILHACVEACQYDRA 155
++ + C+ DRA
Sbjct: 301 MI---LGFCREDRA 311
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 59/126 (46%), Gaps = 4/126 (3%)
Query: 18 MQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFA 77
M N G PD SY LL + C R ++ YK L ++ G D+ Y+T+I F
Sbjct: 251 MLNKGFVPDRLSYTTLLNSLC---RKTQLREAYKLLCRMKLKG-CNPDLVHYNTMILGFC 306
Query: 78 DAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQ 137
A KV DM S G + N+V++ +LI G+ ++ + EEM+ G P+
Sbjct: 307 REDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFS 366
Query: 138 CFNIIL 143
N ++
Sbjct: 367 VSNCLV 372
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/153 (20%), Positives = 70/153 (45%), Gaps = 4/153 (2%)
Query: 7 DLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDV 66
DL+ ++ M + PD+ SY IL++ C G+V+ A ++ ++ + V D
Sbjct: 205 DLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVP----DR 260
Query: 67 FTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEE 126
+Y+T++ + A K+ M+ G N + V ++++I A ++ ++
Sbjct: 261 LSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDD 320
Query: 127 MLLAGCEPNTQCFNIILHACVEACQYDRAFRFF 159
ML GC PN+ + ++ + +D ++
Sbjct: 321 MLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYL 353
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/306 (23%), Positives = 137/306 (44%), Gaps = 26/306 (8%)
Query: 57 ESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGL 116
E G ++ D T+ +IK+ + A + DM GV + + LI + AG+
Sbjct: 141 ERSGLIRHDRDTHMKMIKMLGEVSKLNHARCILLDMPEKGVPWDEDMFVVLIESYGKAGI 200
Query: 117 VEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYN 176
V++++++F++M G E + +N + + +Y A R+F NKM+ EG
Sbjct: 201 VQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYF-----NKMVS---EGV- 251
Query: 177 SNLKQGSIHNATTVPNGFSNSQILSFTERF-------PFTPTTSTYNTLLKA-CG-SDYY 227
+ + H + GF S L RF +P +T+NT++ C
Sbjct: 252 ----EPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMD 307
Query: 228 HAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAI 287
A+ L EMK + P+ ++++ +I + V+ + I + M +GI+P+ Y+T +
Sbjct: 308 EAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLL 367
Query: 288 KVCVESKNFKQALTLYEEMKSCEIHP-NWVTYNTLLKARSKYG---SVLEVQQCLAIYQD 343
++ +A + + M + I P + + LL ++SK G + EV + +A
Sbjct: 368 PGLCDAGKMVEAKNILKNMMAKHIAPKDNSIFLKLLVSQSKAGDMAAATEVLKAMATLNV 427
Query: 344 MQKAGY 349
+AG+
Sbjct: 428 PAEAGH 433
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/343 (20%), Positives = 144/343 (41%), Gaps = 14/343 (4%)
Query: 8 LTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVF 67
L L ++ M+ G+ PD ++N ++ C ++D A+ ++ E+K ++ V
Sbjct: 271 LETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKG----NKIGPSVV 326
Query: 68 TYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEM 127
+Y+T+IK + L++ +MRS+G+ N +S+L+ AG + +A + + M
Sbjct: 327 SYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNM 386
Query: 128 LLAGCEP-NTQCFNIILHACVEACQYDRA---FRFFHSWKGNKMLGSFGEGYNSNLKQGS 183
+ P + F +L + +A A + + G +G + K +
Sbjct: 387 MAKHIAPKDNSIFLKLLVSQSKAGDMAAATEVLKAMATLNVPAEAGHYGVLIENQCKASA 446
Query: 184 IHNATTVPNGFSNSQ-ILSFTERFPFTPTTSTYNTLLKACGSDYYHAKA--LINEMKTVG 240
+ A + + + IL + P S YN +++ ++ AKA L ++ G
Sbjct: 447 YNRAIKLLDTLIEKEIILRHQDTLEMEP--SAYNPIIEYLCNNGQTAKAEVLFRQLMKRG 504
Query: 241 LSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQAL 300
+ +Q + LI N + + EILK M G+ + AY IK + A
Sbjct: 505 VQ-DQDALNNLIRGHAKEGNPDSSYEILKIMSRRGVPRESNAYELLIKSYMSKGEPGDAK 563
Query: 301 TLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQD 343
T + M P+ + +++++ + G V + + I D
Sbjct: 564 TALDSMVEDGHVPDSSLFRSVIESLFEDGRVQTASRVMMIMID 606
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 78/172 (45%), Gaps = 31/172 (18%)
Query: 11 TLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKEL--------KH------- 55
++ I+Q M++LG++ + SYN L K GR +A+ + ++ +H
Sbjct: 204 SVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLW 263
Query: 56 -------LESVGR---------LKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNL 99
LE+ R + D T++T+I F K A K+ +M+ +
Sbjct: 264 GFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGP 323
Query: 100 NTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQ 151
+ V+++++I V+ +++FEEM +G EPN ++ +L +A +
Sbjct: 324 SVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGK 375
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 114/261 (43%), Gaps = 28/261 (10%)
Query: 100 NTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFF 159
+ ++ LI+ C+ +G + A++LF+EM+ +P F ++H + + A +
Sbjct: 151 DACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKMK 210
Query: 160 HSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERF-------PFTPTT 212
H ML +G + ++H ++ LSF +
Sbjct: 211 HD-----MLKVYG-------VRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDA 258
Query: 213 STYNT----LLKACGSDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEIL 268
+ Y+T L+KA S+ ++ EM G P+ +T+++LI+ + E A +L
Sbjct: 259 AIYSTLISSLIKAGRSN--EVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVL 316
Query: 269 KSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKY 328
M + G+KPDVI+Y + V K +++A L+E+M P+ ++Y + +
Sbjct: 317 DEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEG 376
Query: 329 GSVLEVQQCLAIYQDMQKAGY 349
L+ ++ I +M GY
Sbjct: 377 ---LQFEEAAVILDEMLFKGY 394
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 108/269 (40%), Gaps = 46/269 (17%)
Query: 12 LNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYST 71
L ++ M +KP ++ L+ C RV A M ++ + V + V Y++
Sbjct: 172 LKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKMKHDMLKVYGV---RPTVHIYAS 228
Query: 72 IIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAG 131
+IK A K+K + + ++ +S+LI++ AG + + EEM G
Sbjct: 229 LIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKG 288
Query: 132 CEPNTQCFNIILHA-CVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTV 190
C+P+T +N++++ CVE S N++L E LK
Sbjct: 289 CKPDTVTYNVLINGFCVEN----------DSESANRVLDEMVE---KGLK---------- 325
Query: 191 PNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKALINEMKTVGLSPNQITWSI 250
P+ S + IL R + A L +M G SP+ +++ I
Sbjct: 326 PDVISYNMILGVFFRI-----------------KKWEEATYLFEDMPRRGCSPDTLSYRI 368
Query: 251 LID-ICGGTENVEGAIEILKSMGDAGIKP 278
+ D +C G + E A+ IL M G KP
Sbjct: 369 VFDGLCEGLQFEEAAV-ILDEMLFKGYKP 396
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 61/136 (44%), Gaps = 4/136 (2%)
Query: 14 IYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTII 73
I + M G KPD +YN+L+ CV + A + E+ LK DV +Y+ I+
Sbjct: 280 ILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVE----KGLKPDVISYNMIL 335
Query: 74 KVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCE 133
VF K W+ A + DM G + +T+++ + + E+A + +EML G +
Sbjct: 336 GVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEMLFKGYK 395
Query: 134 PNTQCFNIILHACVEA 149
P L E+
Sbjct: 396 PRRDRLEGFLQKLCES 411
>AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein / CBS domain-containing protein |
chr5:3374443-3377332 REVERSE LENGTH=580
Length = 580
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 136/287 (47%), Gaps = 24/287 (8%)
Query: 61 RLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQA 120
R+ L T S I+ + +L Q+ +V+ + G LNT+ +S++ AC H G ++ A
Sbjct: 39 RINLKPLT-SRIVLLTRRRQLGQIVEEVEAAKKRYG-RLNTIVMNSVLEACVHCGNIDLA 96
Query: 121 IQLFEEML-LAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNL 179
+++F EM G ++ + IL +A + D AF+ + + G+ +S+L
Sbjct: 97 LRMFHEMAEPGGIGVDSISYATILKGLGKARRIDEAFQMLETIEYGTAAGT--PKLSSSL 154
Query: 180 KQG---SIHNATTV--PNG-FSNSQILSFTERFPFTPTTSTYNTLLKA-CGSDYYHAKA- 231
G ++ NA + NG + IL TP+ YN L+K S+ A
Sbjct: 155 IYGLLDALINAGDLRRANGLLARYDILLLDHG---TPSVLIYNLLMKGYVNSESPQAAIN 211
Query: 232 LINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMG-------DAGIKPDVIAYT 284
L++EM + L P+++T++ LI C +++ A++ M D ++PDV+ YT
Sbjct: 212 LLDEMLRLRLEPDRLTYNTLIHACIKCGDLDAAMKFFNDMKEKAEEYYDDFLQPDVVTYT 271
Query: 285 TAIKVCVESKNFKQALTLYEEMKSCE-IHPNWVTYNTLLKARSKYGS 330
T +K ++ + ++ EMK CE + + + ++ A K GS
Sbjct: 272 TLVKGFGDATDLLSLQEIFLEMKLCENVFIDRTAFTAVVDAMLKCGS 318
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 90/219 (41%), Gaps = 52/219 (23%)
Query: 31 NILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAK----LWQMAL 86
N +L+AC G +DLA M+ E+ +G +D +Y+TI+K A+ +QM
Sbjct: 81 NSVLEACVHCGNIDLALRMFHEMAEPGGIG---VDSISYATILKGLGKARRIDEAFQMLE 137
Query: 87 KVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQA-------------------------- 120
+++ + L++ L++A +AG + +A
Sbjct: 138 TIEYGTAAGTPKLSSSLIYGLLDALINAGDLRRANGLLARYDILLLDHGTPSVLIYNLLM 197
Query: 121 ------------IQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKML 168
I L +EML EP+ +N ++HAC++ D A +FF+ K
Sbjct: 198 KGYVNSESPQAAINLLDEMLRLRLEPDRLTYNTLIHACIKCGDLDAAMKFFNDMKEK--- 254
Query: 169 GSFGEGYNSNLKQGSIHNATTVPNGFSN-SQILSFTERF 206
E Y + Q + TT+ GF + + +LS E F
Sbjct: 255 ---AEEYYDDFLQPDVVTYTTLVKGFGDATDLLSLQEIF 290
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 96/225 (42%), Gaps = 20/225 (8%)
Query: 135 NTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGF 194
NT N +L ACV D A R FH +G Y + LK + A + F
Sbjct: 76 NTIVMNSVLEACVHCGNIDLALRMFHEMAEPGGIGVDSISYATILK--GLGKARRIDEAF 133
Query: 195 SNSQILSFTERFPFTP--TTSTYNTLLKAC--GSDYYHAKALINEMKTVGL---SPNQIT 247
+ + + TP ++S LL A D A L+ + L +P+ +
Sbjct: 134 QMLETIEYGTA-AGTPKLSSSLIYGLLDALINAGDLRRANGLLARYDILLLDHGTPSVLI 192
Query: 248 WSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMK 307
+++L+ +E+ + AI +L M ++PD + Y T I C++ + A+ + +MK
Sbjct: 193 YNLLMKGYVNSESPQAAINLLDEMLRLRLEPDRLTYNTLIHACIKCGDLDAAMKFFNDMK 252
Query: 308 SCE-------IHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQ 345
+ P+ VTY TL+K +L +Q+ I+ +M+
Sbjct: 253 EKAEEYYDDFLQPDVVTYTTLVKGFGDATDLLSLQE---IFLEMK 294
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 67/133 (50%), Gaps = 10/133 (7%)
Query: 3 VNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESV--- 59
VNS +N+ M L L+PD +YN L+ AC G +D A + ++K
Sbjct: 201 VNSESPQAAINLLDEMLRLRLEPDRLTYNTLIHACIKCGDLDAAMKFFNDMKEKAEEYYD 260
Query: 60 GRLKLDVFTYSTIIKVFADA----KLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAG 115
L+ DV TY+T++K F DA L ++ L++K V ++ A++++++A G
Sbjct: 261 DFLQPDVVTYTTLVKGFGDATDLLSLQEIFLEMKL---CENVFIDRTAFTAVVDAMLKCG 317
Query: 116 LVEQAIQLFEEML 128
A+ +F E+L
Sbjct: 318 STSGALCVFGEIL 330
>AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:17160224-17162221 REVERSE
LENGTH=665
Length = 665
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 67/338 (19%), Positives = 146/338 (43%), Gaps = 25/338 (7%)
Query: 9 TYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFT 68
T L + M + G++P + L+ AC + +++YK ++ E + L V
Sbjct: 328 TRVLKLLNAMDSAGVRPSREEHERLIWACTREEHYIVGKELYKRIR--ERFSEISLSVCN 385
Query: 69 YSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAW-------SSLINACAHAGLVEQAI 121
+ +I + AK W AL++ D+ G N +++ + L++A + G+ +
Sbjct: 386 H--LIWLMGKAKKWWAALEIYEDLLDEGPEPNNLSYELVVSHFNILLSAASKRGIWRWGV 443
Query: 122 QLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGN---KMLGSFGEGYNSN 178
+L +M G +P + +N +L AC +A + A + F + N + S+G S
Sbjct: 444 RLLNKMEDKGLKPQRRHWNAVLVACSKASETTAAIQIFKAMVDNGEKPTVISYG-ALLSA 502
Query: 179 LKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKA-CGSDYYHA-KALINEM 236
L++G +++ ++ + + P Y T+ G ++ L+ EM
Sbjct: 503 LEKGKLYDEAF--------RVWNHMIKVGIEPNLYAYTTMASVLTGQQKFNLLDTLLKEM 554
Query: 237 KTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNF 296
+ G+ P+ +T++ +I C A E M ++P+ I Y I+
Sbjct: 555 ASKGIEPSVVTFNAVISGCARNGLSGVAYEWFHRMKSENVEPNEITYEMLIEALANDAKP 614
Query: 297 KQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEV 334
+ A L+ + ++ + + Y+ ++K+ YG+ +++
Sbjct: 615 RLAYELHVKAQNEGLKLSSKPYDAVVKSAETYGATIDL 652
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 85/182 (46%), Gaps = 5/182 (2%)
Query: 7 DLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDV 66
+ T + I++ M + G KP + SY LL A + L + ++ H+ VG ++ ++
Sbjct: 473 ETTAAIQIFKAMVDNGEKPTVISYGALLSAL---EKGKLYDEAFRVWNHMIKVG-IEPNL 528
Query: 67 FTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEE 126
+ Y+T+ V + + + + +M S G+ + V ++++I+ CA GL A + F
Sbjct: 529 YAYTTMASVLTGQQKFNLLDTLLKEMASKGIEPSVVTFNAVISGCARNGLSGVAYEWFHR 588
Query: 127 MLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHN 186
M EPN + +++ A + A+ H N+ L + Y++ +K +
Sbjct: 589 MKSENVEPNEITYEMLIEALANDAKPRLAYE-LHVKAQNEGLKLSSKPYDAVVKSAETYG 647
Query: 187 AT 188
AT
Sbjct: 648 AT 649
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/323 (19%), Positives = 132/323 (40%), Gaps = 44/323 (13%)
Query: 11 TLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYS 70
+ + M G +PD + LL A C G V A ++++++ R +++ ++
Sbjct: 202 AIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRM-----RFPVNLRYFT 256
Query: 71 TIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLA 130
+++ + A V M AG + V +++L++ A+AG + A L +M
Sbjct: 257 SLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRR 316
Query: 131 GCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTV 190
G EPN C+ +++ A + + + A + F E Y + + T +
Sbjct: 317 GFEPNANCYTVLIQALCKVDRMEEAMKVFVEM----------ERYEC---EADVVTYTAL 363
Query: 191 PNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKALINEMKTVGLSPNQITWSI 250
+GF + Y ++++M GL P+++T+
Sbjct: 364 VSGFCK-----------WGKIDKCY---------------IVLDDMIKKGLMPSELTYMH 397
Query: 251 LIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCE 310
++ E+ E +E+++ M PD+ Y I++ + K+A+ L+ EM+
Sbjct: 398 IMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENG 457
Query: 311 IHPNWVTYNTLLKARSKYGSVLE 333
+ P T+ ++ + G +LE
Sbjct: 458 LSPGVDTFVIMINGLASQGCLLE 480
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/312 (21%), Positives = 132/312 (42%), Gaps = 34/312 (10%)
Query: 68 TYSTIIKVFADAKLWQMALKVKHDMRSAGVNL-NTVAWSSLINACAHAGLVEQAIQLFEE 126
Y +++K+ + + + + +MR L + L+ A A +V++AI++ +E
Sbjct: 149 VYKSMVKILSKMRQFGAVWGLIEEMRKENPQLIEPELFVVLVQRFASADMVKKAIEVLDE 208
Query: 127 MLLAGCEPNTQCFNIILHA-CVEACQYDRA-------------FRFFHS-WKGNKMLGSF 171
M G EP+ F +L A C D A R+F S G +G
Sbjct: 209 MPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMRFPVNLRYFTSLLYGWCRVGKM 268
Query: 172 GEG------YNSNLKQGSIHNATTVPNGFSNS-------QILSFTERFPFTPTTSTYNTL 218
E N + I + T + +G++N+ +L R F P + Y L
Sbjct: 269 MEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVL 328
Query: 219 LKA-CGSDYY-HAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGI 276
++A C D A + EM+ + +T++ L+ ++ +L M G+
Sbjct: 329 IQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGL 388
Query: 277 KPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQ 336
P + Y + + ++F++ L L E+M+ E HP+ YN +++ K G EV++
Sbjct: 389 MPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLG---EVKE 445
Query: 337 CLAIYQDMQKAG 348
+ ++ +M++ G
Sbjct: 446 AVRLWNEMEENG 457
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 76/328 (23%), Positives = 138/328 (42%), Gaps = 18/328 (5%)
Query: 11 TLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYS 70
++ I+ + + G+K + S N LL R DL M+K K ES G + ++FT +
Sbjct: 139 SMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSK--ESFG-ITPNIFTCN 195
Query: 71 TIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLA 130
++K + A KV ++ S G+ N V +++++ G +E A ++ EEML
Sbjct: 196 LLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDR 255
Query: 131 GCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLG---SFGEGYNSNLKQGSIHNA 187
G P+ + +++ + ++ A + N++ ++G + K+
Sbjct: 256 GWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKK---- 311
Query: 188 TTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYY--HAKALINEMKTVGLSPNQ 245
+G + + ER F P +S ++ A D+ A L +M P+
Sbjct: 312 ----SGEARNMFDEMLER-SFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDN 366
Query: 246 ITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEE 305
S LI V A ++ I P ++ Y T I E +A L+++
Sbjct: 367 ALLSTLIHWLCKEGRVTEARKLFDEFEKGSI-PSLLTYNTLIAGMCEKGELTEAGRLWDD 425
Query: 306 MKSCEIHPNWVTYNTLLKARSKYGSVLE 333
M + PN TYN L++ SK G+V E
Sbjct: 426 MYERKCKPNAFTYNVLIEGLSKNGNVKE 453
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/285 (21%), Positives = 113/285 (39%), Gaps = 25/285 (8%)
Query: 7 DLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDV 66
D+ + + ++GL P++ +Y +L G ++ A+ + +E+ D
Sbjct: 206 DIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYP----DA 261
Query: 67 FTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEE 126
TY+ ++ + + A V DM + N V + +I A +A +F+E
Sbjct: 262 TTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDE 321
Query: 127 MLLAGCEPNTQ-CFNIIL-----HACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLK 180
ML P++ C +I H EAC R + N +L + + K
Sbjct: 322 MLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTL---IHWLCK 378
Query: 181 QGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKAC--GSDYYHAKALINEMKT 238
+G + A + + F I P+ TYNTL+ + A L ++M
Sbjct: 379 EGRVTEARKLFDEFEKGSI----------PSLLTYNTLIAGMCEKGELTEAGRLWDDMYE 428
Query: 239 VGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAY 283
PN T+++LI+ NV+ + +L+ M + G P+ +
Sbjct: 429 RKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTF 473
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 61/131 (46%), Gaps = 4/131 (3%)
Query: 216 NTLLKACGSDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAG 275
N L++ D HA N ++ G++PN T ++L+ ++E A ++L + G
Sbjct: 163 NVLIQNQRFDLVHA-MFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMG 221
Query: 276 IKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQ 335
+ P+++ YTT + V + + A + EEM +P+ TY L+ K G E
Sbjct: 222 LVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAA 281
Query: 336 QCLAIYQDMQK 346
+ DM+K
Sbjct: 282 ---TVMDDMEK 289
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 82/376 (21%), Positives = 154/376 (40%), Gaps = 64/376 (17%)
Query: 11 TLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYS 70
L +Y+ + GL + T++ IL+K C AGR++ ++ + ++ K DVF Y+
Sbjct: 247 ALAVYEDFKEDGLVEESTTFMILVKGLCKAGRIEEMLEILQRMRE----NLCKPDVFAYT 302
Query: 71 TIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEM--- 127
+IK +L+V +MR + + +A+ +L+ G VE+ +LF EM
Sbjct: 303 AMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGK 362
Query: 128 ---------------LLAGCEPNTQC-----------------FNIILHACVEACQYDRA 155
+A + + C +N ++ Q D+A
Sbjct: 363 QILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQVDKA 422
Query: 156 FRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSN-SQILSFTER-----FPFT 209
++ F ++ F I A V N S+ S +L ER +P +
Sbjct: 423 YKLFQVAIEEELEPDFE-------TLSPIMVAYVVMNRLSDFSNVL---ERIGELGYPVS 472
Query: 210 PTTSTYNTLLKACGSDYYHAKAL--INEMKTVGLSPNQITWSILIDICGGTENVEGAIEI 267
+ + LL C + +A AL +KT G + ++IL++ +++ ++ +
Sbjct: 473 DYLTQFFKLL--CADEEKNAMALDVFYILKTKGHGSVSV-YNILMEALYKMGDIQKSLSL 529
Query: 268 LKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSK 327
M G +PD +Y+ AI VE + K A + +E++ P+ Y +L K +
Sbjct: 530 FYEMRKLGFEPDSSSYSIAICCFVEKGDVKAACSFHEKIIEMSCVPSIAAYLSLTKGLCQ 589
Query: 328 YGSV----LEVQQCLA 339
G + L V++CL
Sbjct: 590 IGEIDAVMLLVRECLG 605
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 64/130 (49%), Gaps = 2/130 (1%)
Query: 204 ERFPFTPTTSTYNTLLKACGSDYYH--AKALINEMKTVGLSPNQITWSILIDICGGTENV 261
++F F P YN ++ A + Y A A+ + K GL T+ IL+ +
Sbjct: 220 KKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKAGRI 279
Query: 262 EGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTL 321
E +EIL+ M + KPDV AYT IK V N +L +++EM+ EI P+ + Y TL
Sbjct: 280 EEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTL 339
Query: 322 LKARSKYGSV 331
+ K G V
Sbjct: 340 VVGLCKDGRV 349
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 99/240 (41%), Gaps = 47/240 (19%)
Query: 112 AHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSF 171
++G+ E A +LF+EM CE + FN +L A V + + D A + F
Sbjct: 133 GYSGMAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKE---------- 182
Query: 172 GEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKAC---GSDYYH 228
E+ TP TYNT++KA GS
Sbjct: 183 ------------------------------LPEKLGITPDLVTYNTMIKALCRKGS-MDD 211
Query: 229 AKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIK 288
++ E++ G P+ I+++ L++ E I M + P++ +Y + ++
Sbjct: 212 ILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVR 271
Query: 289 VCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAG 348
+K F AL L + MK+ I P+ TYN L+ A ++ EV +C Y +M++ G
Sbjct: 272 GLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKC---YNEMKEKG 328
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/283 (20%), Positives = 127/283 (44%), Gaps = 16/283 (5%)
Query: 14 IYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTII 73
I +++Q D+ S + +++ + G +A+ +K + + + V +++ ++
Sbjct: 106 IDEVLQYQKKFDDIKSEDFVIRIMLLYGYSGMAEHAHKLFDEMPELN-CERTVKSFNALL 164
Query: 74 KVFADAKLWQMALKVKHDM-RSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGC 132
+ ++K A+K ++ G+ + V ++++I A G ++ + +FEE+ G
Sbjct: 165 SAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIFEELEKNGF 224
Query: 133 EPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPN 192
EP+ FN +L + R + K +K L YNS ++ T
Sbjct: 225 EPDLISFNTLLEEFYRRELFVEGDRIWDLMK-SKNLSPNIRSYNSRVR------GLTRNK 277
Query: 193 GFSNS-QILSFTERFPFTPTTSTYNTLLKACGSDYYHAKAL--INEMKTVGLSPNQITWS 249
F+++ ++ + +P TYN L+ A D + + NEMK GL+P+ +T+
Sbjct: 278 KFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTYC 337
Query: 250 ILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVE 292
+LI + +++ A+E+ + IK +++ K VE
Sbjct: 338 MLIPLLCKKGDLDRAVEV----SEEAIKHKLLSRPNMYKPVVE 376
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 73/144 (50%), Gaps = 5/144 (3%)
Query: 3 VNSRDLTYTLNIY-QIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGR 61
VNS+ L + + ++ + LG+ PD+ +YN ++KA C G +D D+ + LE G
Sbjct: 168 VNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMD---DILSIFEELEKNG- 223
Query: 62 LKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAI 121
+ D+ +++T+++ F +L+ ++ M+S ++ N +++S + A+
Sbjct: 224 FEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDAL 283
Query: 122 QLFEEMLLAGCEPNTQCFNIILHA 145
L + M G P+ +N ++ A
Sbjct: 284 NLIDVMKTEGISPDVHTYNALITA 307
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 115/275 (41%), Gaps = 27/275 (9%)
Query: 12 LNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYST 71
L ++ M+ G +P +++ +K+C V G Q + +L + L +
Sbjct: 402 LKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAG----NA 457
Query: 72 IIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAG 131
+I ++A + + A +V M L++V+W++LI A G +A+ ++EEML G
Sbjct: 458 LITMYAKCGVVEEARQVFRTMPC----LDSVSWNALIAALGQHGHGAEAVDVYEEMLKKG 513
Query: 132 CEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTV- 190
P+ +L AC A D+ ++F S + + G+ H A +
Sbjct: 514 IRPDRITLLTVLTACSHAGLVDQGRKYFDSME-----------TVYRIPPGADHYARLID 562
Query: 191 ----PNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKALINEMKTVGLSPNQI 246
FS+++ S E PF PT + LL C +I K GL P
Sbjct: 563 LLCRSGKFSDAE--SVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHD 620
Query: 247 -TWSILIDICGGTENVEGAIEILKSMGDAGIKPDV 280
T+ +L ++ T E + K M D G+K +V
Sbjct: 621 GTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEV 655
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 77/342 (22%), Positives = 139/342 (40%), Gaps = 55/342 (16%)
Query: 23 LKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLW 82
L+ D S+ ++ G DL +++ + + + + Y+ +I + + +
Sbjct: 215 LEKDERSWTTMMTGYVKNGYFDLGEELLEGMDD-------NMKLVAYNAMISGYVNRGFY 267
Query: 83 QMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNII 142
Q AL++ M S+G+ L+ + S+I ACA AGL++ Q+ +L E + F+
Sbjct: 268 QEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRR--EDFSFHFDNS 325
Query: 143 LHACVEAC-QYDRAFRFFH--------SWKGNKMLGS-------------FGEGYNSNLK 180
L + C ++D A F SW N +L F E N+
Sbjct: 326 LVSLYYKCGKFDEARAIFEKMPAKDLVSW--NALLSGYVSSGHIGEAKLIFKEMKEKNIL 383
Query: 181 QGSIHNATTVPNGFSNS--QILSFTERFPFTPTTSTYNTLLKACG-------SDYYHAKA 231
I + NGF ++ S +R F P ++ +K+C YHA+
Sbjct: 384 SWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQL 443
Query: 232 LINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKP--DVIAYTTAIKV 289
L +G + + LI + VE A ++ ++M P D +++ I
Sbjct: 444 L-----KIGFDSSLSAGNALITMYAKCGVVEEARQVFRTM------PCLDSVSWNALIAA 492
Query: 290 CVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSV 331
+ + +A+ +YEEM I P+ +T T+L A S G V
Sbjct: 493 LGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLV 534
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 132/311 (42%), Gaps = 58/311 (18%)
Query: 48 DMYKELKHLESV--GRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWS 105
++ HLES+ G K +V + ++ A + A++V M S+G+ + A++
Sbjct: 86 NLSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYT 145
Query: 106 SLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGN 165
L+N G V A+QL E+M G NT +N ++ +G
Sbjct: 146 YLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALV-------------------RGL 186
Query: 166 KMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERF---PFTPTTSTYNTLLKAC 222
MLGS +Q L F ER P TY+ LL+A
Sbjct: 187 CMLGSL-------------------------NQSLQFVERLMQKGLAPNAFTYSFLLEAA 221
Query: 223 ----GSDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKP 278
G+D A L++E+ G PN +++++L+ + A+ + + + G K
Sbjct: 222 YKERGTD--EAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKA 279
Query: 279 DVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCL 338
+V++Y ++ +++A +L EM + P+ VTYN L+ + + +G +Q L
Sbjct: 280 NVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHG---RTEQAL 336
Query: 339 AIYQDMQKAGY 349
+ ++M K +
Sbjct: 337 QVLKEMSKGNH 347
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 79/335 (23%), Positives = 141/335 (42%), Gaps = 33/335 (9%)
Query: 22 GLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKL 81
G KP++ LL C A R+ A + ++ + S G + D Y+ ++
Sbjct: 101 GHKPNVAHSTQLLYDLCKANRLKKA---IRVIELMVSSGIIP-DASAYTYLVNQLCKRGN 156
Query: 82 WQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNI 141
A+++ M G NTV +++L+ G + Q++Q E ++ G PN ++
Sbjct: 157 VGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSF 216
Query: 142 ILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILS 201
+L A + D A + ++++ GE NL ++ G ++ +
Sbjct: 217 LLEAAYKERGTDEAVKLL-----DEIIVKGGE---PNLVSYNVLLTGFCKEGRTDDAMAL 268
Query: 202 FTERFP---FTPTTSTYNTLLK--ACGSDYYHAKALINEMKTVGLSPNQITWSILIDICG 256
F E P F +YN LL+ C + A +L+ EM +P+ +T++ILI+
Sbjct: 269 FRE-LPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLA 327
Query: 257 GTENVEGAIEILKSM--GDAGIKPDVIAYTTAI-KVCVESKNFKQALTLYEEMKSCEIHP 313
E A+++LK M G+ + +Y I ++C E K + +EM P
Sbjct: 328 FHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGK-VDLVVKCLDEMIYRRCKP 386
Query: 314 NWVTYNTLLKARSKYGSVLE----VQQCLAIYQDM 344
N TYN + GS+ E VQ+ I Q +
Sbjct: 387 NEGTYNAI-------GSLCEHNSKVQEAFYIIQSL 414
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 75/341 (21%), Positives = 123/341 (36%), Gaps = 81/341 (23%)
Query: 22 GLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKL 81
G +P++ SYN+LL C GR D A +++EL K +V +Y+ +++
Sbjct: 241 GGEPNLVSYNVLLTGFCKEGRTDDAMALFREL----PAKGFKANVVSYNILLRCLCCDGR 296
Query: 82 WQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLF----------------- 124
W+ A + +M + V ++ LIN+ A G EQA+Q+
Sbjct: 297 WEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSY 356
Query: 125 --------------------EEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKG 164
+EM+ C+PN +N I C + AF S
Sbjct: 357 NPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSL-S 415
Query: 165 NKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGS 224
NK + Y S I + N F+ Q+L R F P TY+ L++
Sbjct: 416 NKQKCCTHDFYKS-----VITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGL-- 468
Query: 225 DYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDA-GIKPDVIAY 283
+ M T GA+E+L M ++ KP V +
Sbjct: 469 -------CLEGMFT------------------------GAMEVLSIMEESENCKPTVDNF 497
Query: 284 TTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKA 324
I + + A+ ++E M + PN TY L++
Sbjct: 498 NAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAILVEG 538
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/371 (21%), Positives = 152/371 (40%), Gaps = 44/371 (11%)
Query: 14 IYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTII 73
+++ + G +P + SY LL A V + + E++ + KLD ++ +I
Sbjct: 67 VFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGT----KLDSIFFNAVI 122
Query: 74 KVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAG-- 131
F+++ + A++ M+ G+N T +++LI AG E++ +L + ML G
Sbjct: 123 NAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNV 182
Query: 132 -CEPNTQCFNIILHACVEACQYDRAFRFFHSWKG----------NKMLGSF---GEGYN- 176
PN + FN+++ A + + + A+ + N + + GE
Sbjct: 183 DVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRA 242
Query: 177 -SNLKQGSIHNATTVPNGFSNSQI-------------LSFTERFPFTPTTS---TYNTLL 219
S + + + PNG + + L F R + +N+L+
Sbjct: 243 ESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLI 302
Query: 220 KACGS--DYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIK 277
D ++ MK + + IT+S +++ +E A ++ K M AG+K
Sbjct: 303 NGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVK 362
Query: 278 PDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQC 337
PD AY+ K V +K K+A L E + E PN V + T++ GS +
Sbjct: 363 PDAHAYSILAKGYVRAKEPKKAEELLETL-IVESRPNVVIFTTVISGWCSNGS---MDDA 418
Query: 338 LAIYQDMQKAG 348
+ ++ M K G
Sbjct: 419 MRVFNKMCKFG 429
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 115/256 (44%), Gaps = 26/256 (10%)
Query: 24 KPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQ 83
KP+ + I++ C GRV + +K + R++ ++ ++++I F +
Sbjct: 257 KPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEM----RVEANLVVFNSLINGFVEVMDRD 312
Query: 84 MALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIIL 143
+V M+ V + + +S+++NA + AG +E+A Q+F+EM+ AG +P+ ++I+
Sbjct: 313 GIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILA 372
Query: 144 HACVEACQYDRAFRFF-----HSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQ 198
V A + +A S + + G+ SN GS+ +A V N
Sbjct: 373 KGYVRAKEPKKAEELLETLIVESRPNVVIFTTVISGWCSN---GSMDDAMRVFNKMC--- 426
Query: 199 ILSFTERFPFTPTTSTYNTLLKAC--GSDYYHAKALINEMKTVGLSPNQITWSILID--- 253
+F +P T+ TL+ + A+ ++ M+ G+ P T+ +L +
Sbjct: 427 ------KFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLLAEAWR 480
Query: 254 ICGGTENVEGAIEILK 269
+ G T+ AI LK
Sbjct: 481 VAGLTDESNKAINALK 496
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 70/322 (21%), Positives = 139/322 (43%), Gaps = 34/322 (10%)
Query: 41 GRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLN 100
GR AQ ++K L E+ R L +Y+T++ K + + ++ +G L+
Sbjct: 59 GRPHEAQTVFKTL--AETGHRPSL--ISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLD 114
Query: 101 TVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFH 160
++ ++++INA + +G +E A+Q +M G P T +N ++ A + +R+
Sbjct: 115 SIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLD 174
Query: 161 SW--KGNKMLGSFGEGYNSNL----KQGSIHNATTVPNGFSNSQILSFTERFPFTPTTST 214
+GN +G +N + K+ + A +++ E P T T
Sbjct: 175 LMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAW---------EVVKKMEECGVRPDTVT 225
Query: 215 YNTLLKAC----GSDYYHAKALINEM-KTVGLSPNQITWSILIDICGGTENVEGAIEILK 269
YNT+ C G ++ +M PN T I++ V + ++
Sbjct: 226 YNTIA-TCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVR 284
Query: 270 SMGDAGIKPDVIAYTTAIKVCVE---SKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARS 326
M + ++ +++ + + I VE + LTL MK C + + +TY+T++ A S
Sbjct: 285 RMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVLTL---MKECNVKADVITYSTVMNAWS 341
Query: 327 KYGSVLEVQQCLAIYQDMQKAG 348
G + + Q ++++M KAG
Sbjct: 342 SAGYMEKAAQ---VFKEMVKAG 360
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 71/345 (20%), Positives = 142/345 (41%), Gaps = 45/345 (13%)
Query: 18 MQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFA 77
M+ LGL P ++YN L+K +AG+ + + ++ +L E + ++ T++ +++ +
Sbjct: 141 MKELGLNPTTSTYNTLIKGYGIAGKPERSSELL-DLMLEEGNVDVGPNIRTFNVLVQAWC 199
Query: 78 DAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAG-LVEQAIQLFEEMLLA-GCEPN 135
K + A +V M GV +TV ++++ G V ++ E+M++ +PN
Sbjct: 200 KKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPN 259
Query: 136 TQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFS 195
+ I++ + RF K ++ + +NS I+ V +
Sbjct: 260 GRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVV-FNS-----LINGFVEVMDRDG 313
Query: 196 NSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKA--LINEMKTVGLSPNQITWSILID 253
++L+ + TY+T++ A S Y KA + EM G+ P+ +SIL
Sbjct: 314 IDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAK 373
Query: 254 ICGGTENVEGAIEILK------------------------SMGDA----------GIKPD 279
+ + A E+L+ SM DA G+ P+
Sbjct: 374 GYVRAKEPKKAEELLETLIVESRPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPN 433
Query: 280 VIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKA 324
+ + T + +E K +A + + M+ C + P T+ L +A
Sbjct: 434 IKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLLAEA 478
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 116/300 (38%), Gaps = 39/300 (13%)
Query: 65 DVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLF 124
D + S +I A MA+ + HD+ G+ + ++++I G E++++L
Sbjct: 438 DSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLL 497
Query: 125 EEMLLAGCEPNTQCFNIILHACVEACQYDRAF------RF--FHSW-------------- 162
EM AG EP+ N I E C + A RF F W
Sbjct: 498 GEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKKLCEN 557
Query: 163 ----KGNKMLGSF-GEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFP------FTPT 211
K L GEG+ ++ + + + N + E F P
Sbjct: 558 GRAVDACKYLDDVAGEGFLGHM----VASTAAIDGLIKNEGVDRGLELFRDICANGHCPD 613
Query: 212 TSTYNTLLKAC--GSDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILK 269
Y+ L+KA A L NEM + GL P T++ +ID ++ + +
Sbjct: 614 VIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIV 673
Query: 270 SMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYG 329
M + PDVI YT+ I S +A+ + EMK + +PN +T+ L++ K G
Sbjct: 674 RMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKCG 733
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 84/362 (23%), Positives = 147/362 (40%), Gaps = 55/362 (15%)
Query: 1 MNVNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELK------ 54
+ N D+ TL ++ I+QN GL P YN +++ C GR + + + E+K
Sbjct: 450 VKANKVDMAVTL-LHDIVQN-GLIPGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEP 507
Query: 55 --------------HLESVGRL----KLDVFTYSTIIK--VFADAKLWQM-----ALKVK 89
+ VG L K+ + + IK F KL + A K
Sbjct: 508 SQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKKLCENGRAVDACKYL 567
Query: 90 HDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEA 149
D+ G + VA ++ I+ V++ ++LF ++ G P+ +++++ A +A
Sbjct: 568 DDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKA 627
Query: 150 CQYDRAFRFFHSWKGNKMLGSFGEGYNSNL----KQGSIHNATTVPNGFSNSQILSFTER 205
C+ A F+ +K L YNS + K+G I G S + E+
Sbjct: 628 CRTMEADILFNEMV-SKGLKPTVATYNSMIDGWCKEGEIDR------GLSCIVRMYEDEK 680
Query: 206 FPFTPTTSTYNTLLKACGSDYYHAKALI--NEMKTVGLSPNQITWSILID---ICGGTEN 260
P TY +L+ + ++A+ NEMK PN+IT+ LI CG +
Sbjct: 681 ---NPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKCGWSGE 737
Query: 261 VEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNT 320
A+ + M + ++PD Y + + + S+N ++ EM P V N
Sbjct: 738 ---ALVYFREMEEKEMEPDSAVYLSLVSSFLSSENINAGFGIFREMVHKGRFPVSVDRNY 794
Query: 321 LL 322
+L
Sbjct: 795 ML 796
>AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:4445461-4447290 FORWARD
LENGTH=609
Length = 609
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/305 (19%), Positives = 135/305 (44%), Gaps = 43/305 (14%)
Query: 72 IIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAG 131
++++F + K +++ K ++ T+ SSL A +G +A+++ EEM G
Sbjct: 228 VVELFQEFKSQRLSFLAKE-----SGSIYTIVCSSL----AKSGRAFEALEVLEEMKDKG 278
Query: 132 CEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNL---KQGSIHNAT 188
+++ +++++ A EA + + F G K+L L ++G++
Sbjct: 279 IPESSELYSMLIRAFAEAREVVITEKLFKEAGGKKLLKDPEMCLKVVLMYVREGNMETTL 338
Query: 189 TVPNGFSNSQIL-----------SFTERFPFTPTTSTYNTLLKA---------------- 221
V +++ F+++ F Y +K
Sbjct: 339 EVVAAMRKAELKVTDCILCAIVNGFSKQRGFAEAVKVYEWAMKEECEAGQVTYAIAINAY 398
Query: 222 CGSDYYH-AKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDV 280
C + Y+ A+ L +EM G + +S ++D+ G T + A+ ++ M G KP++
Sbjct: 399 CRLEKYNKAEMLFDEMVKKGFDKCVVAYSNIMDMYGKTRRLSDAVRLMAKMKQRGCKPNI 458
Query: 281 IAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAI 340
Y + I + + + ++A +++EMK ++ P+ V+Y +++ A Y E+++C+ +
Sbjct: 459 WIYNSLIDMHGRAMDLRRAEKIWKEMKRAKVLPDKVSYTSMISA---YNRSKELERCVEL 515
Query: 341 YQDMQ 345
YQ+ +
Sbjct: 516 YQEFR 520
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/300 (20%), Positives = 130/300 (43%), Gaps = 24/300 (8%)
Query: 12 LNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYST 71
L ++ M LG++P+ T++ I++ AC L + + K + R++L+ F +
Sbjct: 249 LRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDE----KRVRLNCFVKTA 304
Query: 72 IIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAG 131
++ + A + Q A ++ +++ G N V W+++I+ G + A QLF+ M
Sbjct: 305 LLDMHAKCRDIQSARRIFNEL---GTQRNLVTWNAMISGYTRIGDMSSARQLFDTM---- 357
Query: 132 CEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVP 191
+ N +N ++ Q A FF + +G+ + S+ +A
Sbjct: 358 PKRNVVSWNSLIAGYAHNGQAALAIEFFED------MIDYGDSKPDEVTMISVLSACGHM 411
Query: 192 NGFSNSQ-ILSFTERFPFTPTTSTYNTL--LKACGSDYYHAKALINEMKTVGLSPNQITW 248
I+ + + S Y +L + A G + + AK + +EMK + +++
Sbjct: 412 ADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMK----ERDVVSY 467
Query: 249 SILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKS 308
+ L + + +L M D GI+PD + YT+ + C + K+ +++ +++
Sbjct: 468 NTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRIFKSIRN 527
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/308 (18%), Positives = 131/308 (42%), Gaps = 36/308 (11%)
Query: 65 DVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLF 124
+VF +++ K F+ + L++ G+ + ++ +I + G++ QA L
Sbjct: 70 NVFVVNSMFKYFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKSAGRFGILFQA--LV 127
Query: 125 EEMLLAGCEPNTQCFNIIL-----HACVEACQYDRAFRFFHSWKG---NKMLGSFGEGYN 176
E++ G + N+I+ H VE+ + + F KG N M+ + + N
Sbjct: 128 EKL---GFFKDPYVRNVIMDMYVKHESVESAR--KVFDQISQRKGSDWNVMISGYWKWGN 182
Query: 177 SN--------LKQGSIHNATTVPNGFSNSQILS----FTERFPFTPTTSTYNTLLKACGS 224
+ + + + T + GF+ + L + +R P + ++N +L
Sbjct: 183 KEEACKLFDMMPENDVVSWTVMITGFAKVKDLENARKYFDRMP-EKSVVSWNAMLSGYAQ 241
Query: 225 DYYHAKAL--INEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIA 282
+ + AL N+M +G+ PN+ TW I+I C + ++K + + ++ +
Sbjct: 242 NGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFV 301
Query: 283 YTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQ 342
T + + + ++ + A ++ E+ + N VT+N ++ ++ G + +Q ++
Sbjct: 302 KTALLDMHAKCRDIQSARRIFNELGT---QRNLVTWNAMISGYTRIGDMSSARQ---LFD 355
Query: 343 DMQKAGYV 350
M K V
Sbjct: 356 TMPKRNVV 363
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 90/214 (42%), Gaps = 26/214 (12%)
Query: 14 IYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTII 73
++ M +G+ PD +Y +L C L + ++ ++ E L+ DV+ ST++
Sbjct: 590 LFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKE----LQSDVYICSTLV 645
Query: 74 KVFAD-AKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGC 132
+++ L L + +R + V W+++I AH G E+AIQLFE M+L
Sbjct: 646 DMYSKCGDLHDSRLMFEKSLRR-----DFVTWNAMICGYAHHGKGEEAIQLFERMILENI 700
Query: 133 EPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNL----KQGSIHNAT 188
+PN F IL AC D+ +F+ K + L Y++ + K G + A
Sbjct: 701 KPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRA- 759
Query: 189 TVPNGFSNSQILSFTERFPFTPTTSTYNTLLKAC 222
L PF + TLL C
Sbjct: 760 -----------LELIREMPFEADDVIWRTLLGVC 782
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 121/290 (41%), Gaps = 26/290 (8%)
Query: 3 VNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRL 62
V S D+ L YQ M KPD+ ++NIL+ C + + DLA D+++E+K
Sbjct: 204 VKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKE----KGC 259
Query: 63 KLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQ 122
+ +V +++T+I+ F + + +K+ ++M G + L++ G V+ A
Sbjct: 260 EPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACG 319
Query: 123 LFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHS-WKGNKM-----LGSFGEGYN 176
L ++L P+ + ++ + RA WK + + EG
Sbjct: 320 LVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLR 379
Query: 177 SNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKA-CGSDYY-HAKALIN 234
K G A+ N+ IL P + T+N LL+ C SD+ A L
Sbjct: 380 ---KSGRTEKASGFMEKMMNAGIL---------PDSVTFNLLLRDLCSSDHSTDANRLRL 427
Query: 235 EMKTVGLSPNQITWSILID-ICGGTENVEGAIEILKSMGDAGIKPDVIAY 283
+ G P++ T+ +L+ EG + ++ M D + PD+ Y
Sbjct: 428 LASSKGYEPDETTYHVLVSGFTKEGRRKEGEV-LVNEMLDKDMLPDIFTY 476
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/311 (22%), Positives = 130/311 (41%), Gaps = 26/311 (8%)
Query: 34 LKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMR 93
+ A C A ++D A + +K L K +V Y+T++ + + AL+ M
Sbjct: 164 IDAYCRARKMDYALLAFDTMKRLIDG---KPNVGVYNTVVNGYVKSGDMDKALRFYQRMG 220
Query: 94 SAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYD 153
+ ++ LIN + + A+ LF EM GCEPN FN ++ + + + +
Sbjct: 221 KERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKIE 280
Query: 154 RAFRFFHSWKGNKMLGSFGEGYNSNL-----KQGSIHNATTVPNGFSNSQILSFTERFPF 208
+ +++ ++ F E L ++G + +A + N ++L
Sbjct: 281 EGVKM--AYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVL-------- 330
Query: 209 TPTTSTYNTLL-KACGSDY-YHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIE 266
P+ Y +L+ K CG + A ++ E+ G +P I + L++ + E A
Sbjct: 331 -PSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASG 389
Query: 267 ILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLL---- 322
++ M +AGI PD + + ++ S + A L S P+ TY+ L+
Sbjct: 390 FMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFT 449
Query: 323 -KARSKYGSVL 332
+ R K G VL
Sbjct: 450 KEGRRKEGEVL 460
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 107/255 (41%), Gaps = 40/255 (15%)
Query: 14 IYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTII 73
I+ M + LKPD +YN L+ C AG VD A + ++ E V V TY+ ++
Sbjct: 388 IFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVP----TVMTYNILL 443
Query: 74 K------VFADA-KLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEE 126
K F D LW+M LK GVN + ++ S+L+ A G +A++L+E
Sbjct: 444 KGYSRIGAFHDVLSLWKMMLK-------RGVNADEISCSTLLEALFKLGDFNEAMKLWEN 496
Query: 127 MLLAGCEPNTQCFNIILHACVEACQYDRA------FRFFHSWKGNKMLGSFGEGYNSNLK 180
+L G +T N+++ + + + A F + + GY K
Sbjct: 497 VLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGY---YK 553
Query: 181 QGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYH---AKALINEMK 237
G++ A V + ER PT YNTL+ Y H L+ E++
Sbjct: 554 VGNLKEAFAVK---------EYMERKGIFPTIEMYNTLISG-AFKYRHLNKVADLVIELR 603
Query: 238 TVGLSPNQITWSILI 252
GL+P T+ LI
Sbjct: 604 ARGLTPTVATYGALI 618
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 72/325 (22%), Positives = 132/325 (40%), Gaps = 42/325 (12%)
Query: 12 LNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYST 71
L++Y M + + PD+ + +I++ A C +G VD A KE ES L+L+V TY++
Sbjct: 210 LHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKET---ESSLGLELNVVTYNS 266
Query: 72 IIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAG 131
+I +A + +V M GV+ N V ++SLI GL+E+A +FE +
Sbjct: 267 LINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKK 326
Query: 132 CEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVP 191
+ + +++ Q A R + N+ + + TT+
Sbjct: 327 LVADQHMYGVLMDGYCRTGQIRDAVRV-----------------HDNMIEIGVRTNTTIC 369
Query: 192 NGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKALINEMKTVGLSPNQITWSIL 251
N N S A+ + + M L P+ T++ L
Sbjct: 370 NSLINGYCKS----------------------GQLVEAEQIFSRMNDWSLKPDHHTYNTL 407
Query: 252 IDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEI 311
+D V+ A+++ M + P V+ Y +K F L+L++ M +
Sbjct: 408 VDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGV 467
Query: 312 HPNWVTYNTLLKARSKYGSVLEVQQ 336
+ + ++ +TLL+A K G E +
Sbjct: 468 NADEISCSTLLEALFKLGDFNEAMK 492
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 84/385 (21%), Positives = 152/385 (39%), Gaps = 52/385 (13%)
Query: 7 DLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDM---------------YK 51
D + +++ + GL D + N+++ C +V+ A+++ Y+
Sbjct: 486 DFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQ 545
Query: 52 ELKH-LESVGRLK--LDVFTYSTIIKVFADAKLWQM----ALKVKH---------DMRSA 95
L H VG LK V Y +F +++ A K +H ++R+
Sbjct: 546 ALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRAR 605
Query: 96 GVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRA 155
G+ + +LI + G++++A EM+ G N + I ++ + D A
Sbjct: 606 GLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEA 665
Query: 156 FRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATT------VPNGFSNSQILSFTERFPFT 209
+L GY S LK+ +ATT + NS T +
Sbjct: 666 CLLLQKIVDFDLLLP---GYQS-LKEFLEASATTCLKTQKIAESVENS-----TPKKLLV 716
Query: 210 PTTSTYNTLLKAC--GSDYYHAKALINEM-KTVGLSPNQITWSILIDICGGTENVEGAIE 266
P YN + A+ L +++ + P++ T++ILI C ++ A
Sbjct: 717 PNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFT 776
Query: 267 ILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARS 326
+ M GI P+++ Y IK + N +A L ++ I PN +TYNTL+
Sbjct: 777 LRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLV 836
Query: 327 KYGSVLEVQQCLAIYQDMQKAGYVR 351
K G+V E + + + M + G VR
Sbjct: 837 KSGNVAEAMR---LKEKMIEKGLVR 858
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 68/323 (21%), Positives = 128/323 (39%), Gaps = 55/323 (17%)
Query: 68 TYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEM 127
+ I+KV+A+ L + AL V +M + G + ++ +SL++ G A+ ++++M
Sbjct: 157 VFDMILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSLLSNLVRKGENFVALHVYDQM 216
Query: 128 LLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNA 187
+ P+ +I+++A + D+A F + S G N I+
Sbjct: 217 ISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETE-----SSLGLELNVVTYNSLINGY 271
Query: 188 TTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKALINE-------MKTVG 240
+ + +++L + TY +L+K Y K L+ E +K
Sbjct: 272 AMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKG-----YCKKGLMEEAEHVFELLKEKK 326
Query: 241 LSPNQITWSILIDICGGTENVEGAI----------------------------------- 265
L +Q + +L+D T + A+
Sbjct: 327 LVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAE 386
Query: 266 EILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKAR 325
+I M D +KPD Y T + + +AL L ++M E+ P +TYN LLK
Sbjct: 387 QIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGY 446
Query: 326 SKYGSVLEVQQCLAIYQDMQKAG 348
S+ G+ +V L++++ M K G
Sbjct: 447 SRIGAFHDV---LSLWKMMLKRG 466
>AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:3606490-3608409 FORWARD
LENGTH=602
Length = 602
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 133/302 (44%), Gaps = 29/302 (9%)
Query: 32 ILLKACCVAGRVDLAQDMYKELKHLESVGRLKLD------VFTYSTIIKVFADAKLWQMA 85
+LL A C G V A MY LE +G +D V ++ ++ + ++ + A
Sbjct: 217 VLLDALCKEGHVREAS-MY-----LERIGG-TMDSNWVPSVRIFNILLNGWFRSRKLKQA 269
Query: 86 LKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHA 145
K+ +M++ V V + +LI V+ A+++ EEM +A E N FN I+
Sbjct: 270 EKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDG 329
Query: 146 CVEACQYDRAF----RFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILS 201
EA + A RFF G ++ YNS +K + A +P S+IL
Sbjct: 330 LGEAGRLSEALGMMERFFVCESGPTIVT-----YNSLVK--NFCKAGDLPGA---SKILK 379
Query: 202 FTERFPFTPTTSTYNTLLK--ACGSDYYHAKALINEMKTVGLSPNQITWSILIDICGGTE 259
PTT+TYN K + + L ++ G SP+++T+ +++ +
Sbjct: 380 MMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDG 439
Query: 260 NVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYN 319
+ A+++ K M + GI PD++ T I + + ++A ++ I P ++T+
Sbjct: 440 KLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGIIPQYITFK 499
Query: 320 TL 321
+
Sbjct: 500 MI 501
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 116/281 (41%), Gaps = 47/281 (16%)
Query: 5 SRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKL 64
SR L +++ M+ + +KP + +Y L++ C RV +A ++ +E+K E +++
Sbjct: 263 SRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAE----MEI 318
Query: 65 DVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLF 124
+ ++ II +A AL + V ++SL+ AG + A ++
Sbjct: 319 NFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKIL 378
Query: 125 EEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSI 184
+ M+ G +P T +N F++F K NK EG N K
Sbjct: 379 KMMMTRGVDPTTTTYN-------------HFFKYFS--KHNKT----EEGMNLYFK---- 415
Query: 185 HNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKAL-IN-EMKTVGLS 242
+ G S P TY+ +LK D + A+ +N EMK G+
Sbjct: 416 ----LIEAGHS--------------PDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGID 457
Query: 243 PNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAY 283
P+ +T ++LI + E +E A E + GI P I +
Sbjct: 458 PDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGIIPQYITF 498
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 110/284 (38%), Gaps = 53/284 (18%)
Query: 69 YSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSS---LINACAHAGLVEQAIQLFE 125
+ +++ A+ +++A + D + N V+ + LI A AG+V+QAI+ FE
Sbjct: 138 FDSVVNSLCKAREFEIAWSLVFDRVRSDEGSNLVSADTFIVLIRRYARAGMVQQAIRAFE 197
Query: 126 EMLLAGCEP------NTQCFNIILHA-CVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSN 178
EP + ++L A C E H + + L G +SN
Sbjct: 198 --FARSYEPVCKSATELRLLEVLLDALCKEG----------HVREASMYLERIGGTMDSN 245
Query: 179 LKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKA--CGSDYYHAKALINEM 236
+ P+ +N LL A+ L EM
Sbjct: 246 -----------------------------WVPSVRIFNILLNGWFRSRKLKQAEKLWEEM 276
Query: 237 KTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNF 296
K + + P +T+ LI+ V+ A+E+L+ M A ++ + + + I E+
Sbjct: 277 KAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGRL 336
Query: 297 KQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAI 340
+AL + E CE P VTYN+L+K K G + + L +
Sbjct: 337 SEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKM 380
>AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:30285358-30286704 REVERSE
LENGTH=448
Length = 448
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 105/249 (42%), Gaps = 47/249 (18%)
Query: 15 YQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIK 74
++ M G+ D+ SY+I + C +G+ A +YKE+K R+KLDV Y+T+I+
Sbjct: 212 WKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKS----RRMKLDVVAYNTVIR 267
Query: 75 VFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEP 134
++ + ++V +MR G N +++I G + A ++ +EM GC+P
Sbjct: 268 AIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQP 327
Query: 135 NTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGF 194
++ I + C+ F K +++L FG S ++ P
Sbjct: 328 DS-----ITYMCL----------FSRLEKPSEILSLFGRMIRSGVR----------PKMD 362
Query: 195 SNSQILSFTERFPF----------------TPTTSTYNTLLKACGSD--YYHAKALINEM 236
+ ++ ER+ F TP ++ YN ++ A A+ EM
Sbjct: 363 TYVMLMRKFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQKGMLDMAREYEEEM 422
Query: 237 KTVGLSPNQ 245
GLSP +
Sbjct: 423 IERGLSPRR 431
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 105/266 (39%), Gaps = 53/266 (19%)
Query: 54 KHLESVGRLKLDVFTYSTIIKVF-ADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACA 112
K +++ G K D+F+YS + + K W+ A+K+ +M+S + L+ VA++++I A
Sbjct: 213 KKMDTEGVTK-DLFSYSIYMDIMCKSGKPWK-AVKLYKEMKSRRMKLDVVAYNTVIRAIG 270
Query: 113 HAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFG 172
+ VE I++F EM GCEPN N I+ E + A+R
Sbjct: 271 ASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRML------------- 317
Query: 173 EGYNSNLKQGSIHNATTVPNGFSN----SQILSFTERFPFTPTTSTYNTLLKACGSDYYH 228
+ K+G ++ T FS S+ILS
Sbjct: 318 ---DEMPKRGCQPDSITYMCLFSRLEKPSEILS--------------------------- 347
Query: 229 AKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIK 288
L M G+ P T+ +L+ ++ + + K+M ++G PD AY I
Sbjct: 348 ---LFGRMIRSGVRPKMDTYVMLMRKFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVID 404
Query: 289 VCVESKNFKQALTLYEEMKSCEIHPN 314
++ A EEM + P
Sbjct: 405 ALIQKGMLDMAREYEEEMIERGLSPR 430
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 60/119 (50%), Gaps = 3/119 (2%)
Query: 230 KALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKV 289
K +M T G++ + ++SI +DI + A+++ K M +K DV+AY T I+
Sbjct: 209 KEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRA 268
Query: 290 CVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAG 348
S+ + + ++ EM+ PN T+NT++K + G + + + L +M K G
Sbjct: 269 IGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRML---DEMPKRG 324
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 50/106 (47%)
Query: 227 YHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTA 286
+ A L EMK+ + + + ++ +I G ++ VE I + + M + G +P+V + T
Sbjct: 241 WKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTI 300
Query: 287 IKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVL 332
IK+ E + A + +EM P+ +TY L K +L
Sbjct: 301 IKLLCEDGRMRDAYRMLDEMPKRGCQPDSITYMCLFSRLEKPSEIL 346
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2761195-2764281 REVERSE
LENGTH=1028
Length = 1028
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 117/272 (43%), Gaps = 24/272 (8%)
Query: 11 TLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYS 70
L Y+ M++ G+ PD ++ +L+ C V + + ++ + HL LD T +
Sbjct: 716 ALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAH----DLDELTSN 771
Query: 71 TIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLA 130
T+I ++A + + +V +MR N V+W+SLIN A G E A+++F+ M +
Sbjct: 772 TLIDMYAKCGDMKGSSQVFDEMRRRS---NVVSWNSLINGYAKNGYAEDALKIFDSMRQS 828
Query: 131 GCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTV 190
P+ F +L AC A + + F M+G +G ++ H A V
Sbjct: 829 HIMPDEITFLGVLTACSHAGKVSDGRKIF-----EMMIGQYG------IEARVDHVACMV 877
Query: 191 PN----GFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKALINEMKTVGLSP-NQ 245
G+ + F E P +++LL AC + I+ K + L P N
Sbjct: 878 DLLGRWGYLQ-EADDFIEAQNLKPDARLWSSLLGACRIHGDDIRGEISAEKLIELEPQNS 936
Query: 246 ITWSILIDICGGTENVEGAIEILKSMGDAGIK 277
+ +L +I E A + K M D G+K
Sbjct: 937 SAYVLLSNIYASQGCWEKANALRKVMRDRGVK 968
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 107/266 (40%), Gaps = 48/266 (18%)
Query: 85 ALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILH 144
A +V +M + GV + V++SS+I+ + G + + ++LF+ M EP+ + +N ++H
Sbjct: 286 AERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVH 345
Query: 145 ACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTE 204
A +A A NL + + E
Sbjct: 346 ALAKASFVSEA---------------------RNLMK-------------------TMEE 365
Query: 205 RFPFTPTTSTYNTLLKAC--GSDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVE 262
P TYN+L+K AK + +EM GL P T+ + I E V
Sbjct: 366 EKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMRILRTGEEV- 424
Query: 263 GAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLL 322
E+L M G +P V Y I+ ++F L L++EMK + P+ +Y ++
Sbjct: 425 --FELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMI 482
Query: 323 KARSKYGSVLEVQQCLAIYQDMQKAG 348
G ++++ Y++M+ G
Sbjct: 483 HGLFLNG---KIEEAYGYYKEMKDKG 505
>AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:5760793-5762619 FORWARD
LENGTH=608
Length = 608
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 83/364 (22%), Positives = 150/364 (41%), Gaps = 40/364 (10%)
Query: 7 DLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDV 66
DL + + M G P+ + +L+ CC G V A ++ L + + V
Sbjct: 192 DLVGVKIVLKRMIGEGFYPNRERFGQILRLCCRTGCVSEAF----QVVGLMICSGISVSV 247
Query: 67 FTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEE 126
+S ++ F + Q A+ + + M G + N V ++SLI G+V++A + +
Sbjct: 248 NVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSK 307
Query: 127 MLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKML----------------GS 170
+ G P+ N+++H +++ A + F S + K++ G
Sbjct: 308 VQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSGK 367
Query: 171 F--------GEGYNSNLKQGSIHNATTVPNGFSNS--QILSFTERFPFTPTTSTYNTLLK 220
F G G + +L G++ + G+++ ++LS F TY L
Sbjct: 368 FDLVPRITHGIGTDFDLVTGNLLSNCFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLS 427
Query: 221 A-CGSDYYHA-----KALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDA 274
A C A K +I E K + + LI++ G N A+ + K
Sbjct: 428 ALCRGGAPRAAIKMYKIIIKEKKHLDAHFHSAIIDSLIEL--GKYNT--AVHLFKRCILE 483
Query: 275 GIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEV 334
DV++YT AIK V +K ++A +L +MK I+PN TY T++ K +V
Sbjct: 484 KYPLDVVSYTVAIKGLVRAKRIEEAYSLCCDMKEGGIYPNRRTYRTIISGLCKEKETEKV 543
Query: 335 QQCL 338
++ L
Sbjct: 544 RKIL 547
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 96/241 (39%), Gaps = 23/241 (9%)
Query: 122 QLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNS---- 177
++ E + ++GCE + F ++L YD+A + + SFG N+
Sbjct: 94 RIIERLKISGCEIKPRVFLLLLEIFWRGHIYDKAIEVYTG------MSSFGFVPNTRAMN 147
Query: 178 -----NLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKAL 232
N K ++ A + G + F F F S + + + D K +
Sbjct: 148 MMMDVNFKLNVVNGALEIFEG------IRFRNFFSFDIALSHFCS--RGGRGDLVGVKIV 199
Query: 233 INEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVE 292
+ M G PN+ + ++ +C T V A +++ M +GI V ++ +
Sbjct: 200 LKRMIGEGFYPNRERFGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFR 259
Query: 293 SKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYVRL 352
S ++A+ L+ +M PN VTY +L+K G V E L+ Q A + L
Sbjct: 260 SGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVL 319
Query: 353 C 353
C
Sbjct: 320 C 320
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/329 (21%), Positives = 134/329 (40%), Gaps = 32/329 (9%)
Query: 1 MNVNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVG 60
M + L + +++ + K + +N+L+ C A + +A +++ + S
Sbjct: 170 MYAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGYCRAKDMHMATTLFRSMPERNSG- 228
Query: 61 RLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQA 120
++ST+IK + D+ A ++ M N V+W++LIN + G E A
Sbjct: 229 -------SWSTLIKGYVDSGELNRAKQLFELMPEK----NVVSWTTLINGFSQTGDYETA 277
Query: 121 IQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSW---KGNKMLGSFGEGY-N 176
I + EML G +PN +L AC ++ R H + G K+ + G +
Sbjct: 278 ISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIR-IHGYILDNGIKLDRAIGTALVD 336
Query: 177 SNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKALINEM 236
K G + A TV + ++ ILS+T A ++ A +M
Sbjct: 337 MYAKCGELDCAATVFSNMNHKDILSWTAMIQGW-----------AVHGRFHQAIQCFRQM 385
Query: 237 KTVGLSPNQITWSILIDICGGTENVEGAIEILKSMG-DAGIKPDVIAYTTAIKVCVESKN 295
G P+++ + ++ C + V+ + SM D I+P + Y + + +
Sbjct: 386 MYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGK 445
Query: 296 FKQALTLYEEMKSCEIHPNWVTYNTLLKA 324
+A L E M I+P+ T+ L +A
Sbjct: 446 LNEAHELVENMP---INPDLTTWAALYRA 471
>AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:24737719-24739353 FORWARD
LENGTH=544
Length = 544
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/316 (21%), Positives = 130/316 (41%), Gaps = 55/316 (17%)
Query: 13 NIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKEL---KHLESVGRLKLDVFTY 69
IY+ + + P+ + I+++ C GR+ D+ + + L SV +
Sbjct: 220 RIYECAIDKRIYPNEITIRIMIQVLCKEGRLKEVVDLLDRICGKRCLPSV------IVNT 273
Query: 70 STIIKVFADAKLWQ-MALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEML 128
S + +V + ++ + M+L + M++ V+ T+ +S ++ A A G + A ++F+EML
Sbjct: 274 SLVFRVLEEMRIEESMSLLKRLLMKNMVVD--TIGYSIVVYAKAKEGDLVSARKVFDEML 331
Query: 129 LAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNAT 188
G N+ + + + C E +G + A
Sbjct: 332 QRGFSANSFVYTVFVRVCCE--------------------------------KGDVKEA- 358
Query: 189 TVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKAL--INEMKTVGLSPNQI 246
++LS E +P T+N L+ + K L M T GL P+
Sbjct: 359 --------ERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSCS 410
Query: 247 TWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEM 306
++ ++ ENV A EIL D G PD Y+ I+ +E + QAL L+ EM
Sbjct: 411 AFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQALKLFYEM 470
Query: 307 KSCEIHPNWVTYNTLL 322
+ ++ P + + +L+
Sbjct: 471 EYRKMSPGFEVFRSLI 486
>AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4903012-4904229 FORWARD
LENGTH=405
Length = 405
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 68/135 (50%), Gaps = 4/135 (2%)
Query: 14 IYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTII 73
I+ LG++ D NIL+K C +G ++ A + E +S + +V T+S +I
Sbjct: 189 IFVSAPKLGVEIDACCLNILIKGLCESGNLEAALQLLDEFPQQKS----RPNVMTFSPLI 244
Query: 74 KVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCE 133
+ F + ++ A K+ M + +T+ ++ LI+ G VE+ I L E M + GCE
Sbjct: 245 RGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCE 304
Query: 134 PNTQCFNIILHACVE 148
PN + +L+ ++
Sbjct: 305 PNPGTYQEVLYGLLD 319
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 109/245 (44%), Gaps = 23/245 (9%)
Query: 114 AGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGE 173
AG + +AI++ M GC P+++ FN IL+ V A +D + F S LG +
Sbjct: 145 AGRINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVS---APKLGVEID 201
Query: 174 GYNSNL------KQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKA-CGS-D 225
N+ + G++ A + + F + P T++ L++ C
Sbjct: 202 ACCLNILIKGLCESGNLEAALQLLDEFPQQKS---------RPNVMTFSPLIRGFCNKGK 252
Query: 226 YYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTT 285
+ A L+ M+ + P+ IT++ILI VE I++L+ M G +P+ Y
Sbjct: 253 FEEAFKLLERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQE 312
Query: 286 AIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQ 345
+ ++ K +A + +M S + P++++Y ++ + SV+E+ L + M
Sbjct: 313 VLYGLLDKKRNLEAKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVL---RQMV 369
Query: 346 KAGYV 350
G+V
Sbjct: 370 NHGFV 374
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 81/369 (21%), Positives = 152/369 (41%), Gaps = 40/369 (10%)
Query: 12 LNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKH---------------- 55
+ QIM+ G+ P+ YN LL A C G+V A+ + E+K
Sbjct: 202 FKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEMKEPNDVTFNILISAYCNE 261
Query: 56 ---------LESVGRLKL--DVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAW 104
LE L DV T + +++V + AL+V + S G ++ VA
Sbjct: 262 QKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVAC 321
Query: 105 SSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKG 164
++L+ G + A + F EM G PN + +N+++ + D A F+ K
Sbjct: 322 NTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKT 381
Query: 165 NKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGS 224
+ + +F +N+ ++ SI T +G +++ ++ YN ++
Sbjct: 382 DAIRWNFAT-FNTLIRGLSIGGRTD--DGLKILEMMQDSDTV-HGARIDPYNCVIYGFYK 437
Query: 225 DYYHAKALINEMKTVGLSPNQITWSI-LIDIC--GGTENVEGAIEILKSMGDAGIKPDVI 281
+ AL +K L P + S LI +C GG ++++ A + + +G+ G+ P +I
Sbjct: 438 ENRWEDALEFLLKMEKLFPRAVDRSFKLISLCEKGGMDDLKTAYD--QMIGEGGV-PSII 494
Query: 282 AYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIY 341
I + +++L L +M + P T+N ++ K V+ +
Sbjct: 495 VSHCLIHRYSQHGKIEESLELINDMVTRGYLPRSSTFNAVIIGFCKQDKVM---NGIKFV 551
Query: 342 QDMQKAGYV 350
+DM + G V
Sbjct: 552 EDMAERGCV 560
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 115/281 (40%), Gaps = 28/281 (9%)
Query: 4 NSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLK 63
NSR L +++ M+ G + + +L+AC ++L + + +
Sbjct: 238 NSRS-DVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYDQ----- 291
Query: 64 LDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQL 123
D+ + ++ ++ + AL+V + M+ V + WS++I+ A G ++A++L
Sbjct: 292 -DLILNNALVDMYCKCGSLEDALRVFNQMKERDV----ITWSTMISGLAQNGYSQEALKL 346
Query: 124 FEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNL---- 179
FE M +G +PN +L AC A + + +F S K + E Y +
Sbjct: 347 FERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLG 406
Query: 180 KQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKALINEMKTV 239
K G + +A + N P T+ TLL AC A K +
Sbjct: 407 KAGKLDDAVKLLN------------EMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVI 454
Query: 240 GLSPNQI-TWSILIDICGGTENVEGAIEILKSMGDAGIKPD 279
L P T+++L +I ++ + EI M D GIK +
Sbjct: 455 ALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKE 495
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 133/319 (41%), Gaps = 33/319 (10%)
Query: 11 TLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQ-DMYKELKHLESVGRLKLDVFTY 69
L + +M ++P++ +Y+ +L++C V + + KE LES DVF
Sbjct: 146 ALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDVRMLHCGIIKE--GLES------DVFVR 197
Query: 70 STIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLL 129
S +I VFA + AL V +M V + + W+S+I A + A++LF+ M
Sbjct: 198 SALIDVFAKLGEPEDALSVFDEM----VTGDAIVWNSIIGGFAQNSRSDVALELFKRMKR 253
Query: 130 AGCEPNTQCFNIILHACVEACQYDRAFR-FFHSWKGNKMLGSFGEGYNSNLKQGSIHNAT 188
AG +L AC + + H K ++ L + K GS+ +A
Sbjct: 254 AGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYDQDLILNNALVDMYCKCGSLEDAL 313
Query: 189 TVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKA--LINEMKTVGLSPNQI 246
V N ++ T++T++ + Y +A L MK+ G PN I
Sbjct: 314 RVFNQMKERDVI-------------TWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYI 360
Query: 247 TWSILIDICGGTENVEGAIEILKSMGDA-GIKPDVIAYTTAIKVCVESKNFKQALTLYEE 305
T ++ C +E +SM GI P Y I + ++ A+ L E
Sbjct: 361 TIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNE 420
Query: 306 MKSCEIHPNWVTYNTLLKA 324
M+ CE P+ VT+ TLL A
Sbjct: 421 ME-CE--PDAVTWRTLLGA 436
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/306 (20%), Positives = 122/306 (39%), Gaps = 38/306 (12%)
Query: 4 NSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLK 63
+R + + + M+ G K + + +N +L + V AQ ++ ++K R +
Sbjct: 174 RARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKK----KRFE 229
Query: 64 LDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQL 123
D+ +Y+ +++ + +V +M+ G + VA+ +INA A E+AI+
Sbjct: 230 PDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRF 289
Query: 124 FEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKG----------NKMLGSF-- 171
F EM C+P+ F +++ + + A FF K N ++G++
Sbjct: 290 FNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCW 349
Query: 172 -----------------GEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTST 214
G G N+ +H+ + + + + PT ST
Sbjct: 350 SQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQR---SKEAYEVYQTMSCEPTVST 406
Query: 215 YNTLLKA-CGSDYYH-AKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMG 272
Y +++ C + A + +EMK G+ P +S LI ++ A E M
Sbjct: 407 YEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEML 466
Query: 273 DAGIKP 278
D GI+P
Sbjct: 467 DVGIRP 472
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 72/148 (48%), Gaps = 5/148 (3%)
Query: 204 ERFPFTPTTSTYNTLLKACGS--DYYHAKALINEMKTVGLSPNQITWSILIDICGGTENV 261
E F F +S +N +L + A+ + ++MK P+ +++IL++ G N+
Sbjct: 189 EEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNL 248
Query: 262 EGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTL 321
E+ + M D G +PDV+AY I ++K +++A+ + EM+ P+ + +L
Sbjct: 249 LRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSL 308
Query: 322 LKARSKYGSVLEVQQCLAIYQDMQKAGY 349
+ GS ++ L ++ + +G+
Sbjct: 309 ING---LGSEKKLNDALEFFERSKSSGF 333
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 66/137 (48%), Gaps = 7/137 (5%)
Query: 18 MQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFA 77
M+ G+ P+ +Y+I+L R A ++Y+ + +V TY ++++F
Sbjct: 363 MRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTMSCEPTVS-------TYEIMVRMFC 415
Query: 78 DAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQ 137
+ + MA+K+ +M+ GV +SSLI A H +++A + F EML G P
Sbjct: 416 NKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRPPGH 475
Query: 138 CFNIILHACVEACQYDR 154
F+ + ++ + D+
Sbjct: 476 MFSRLKQTLLDEGRKDK 492
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 73/311 (23%), Positives = 136/311 (43%), Gaps = 29/311 (9%)
Query: 43 VDLAQDMYKELKHLESVGRLKLDVF----TYSTIIKVFADAKLWQMALKVKHDMRSAGVN 98
VD+ K + E V R++ D T + I++ FA A W+ A+ + + G+
Sbjct: 128 VDILGKAKKWDRMKEFVERMRGDKLVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLE 187
Query: 99 LNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRF 158
NT + + L++ VEQA + + L + PN FNI +H +A + + A
Sbjct: 188 KNTESMNLLLDTLCKEKRVEQARVVLLQ-LKSHITPNAHTFNIFIHGWCKANRVEEAL-- 244
Query: 159 FHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNS-------QILSFTERFPFTPT 211
W +M G G+ + + + TT+ + ++LS E P
Sbjct: 245 ---WTIQEMK---GHGF-----RPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPN 293
Query: 212 TSTYNTLLKACGS--DYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILK 269
+ TY T++ + + ++ A + MK G P+ + ++ LI +E A + +
Sbjct: 294 SITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFR 353
Query: 270 -SMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEI-HPNWVTYNTLLKARSK 327
M + G+ + Y + I + +A+ L +EM+S + +P+ TY LL++ K
Sbjct: 354 VEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFK 413
Query: 328 YGSVLEVQQCL 338
G V+EV + L
Sbjct: 414 RGDVVEVGKLL 424
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/264 (21%), Positives = 114/264 (43%), Gaps = 21/264 (7%)
Query: 23 LKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGR-LKLDVFTYSTIIKVFADAKL 81
+ P+ ++NI + C A RV+ A +E+K G + V +Y+TII+ +
Sbjct: 220 ITPNAHTFNIFIHGWCKANRVEEALWTIQEMK-----GHGFRPCVISYTTIIRCYCQQFE 274
Query: 82 WQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNI 141
+ ++ +M + G N++ +++++++ E+A+++ M +GC+P++ +N
Sbjct: 275 FIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNC 334
Query: 142 ILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHN----ATTVPNGFSNS 197
++H A + + A R F + YNS + H+ A + +S
Sbjct: 335 LIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESS 394
Query: 198 QILSFTERFPFTPTTSTYNTLLKAC--GSDYYHAKALINEMKTV-GLSPNQITWSILIDI 254
+ + P TY LL++C D L+ EM T LS ++ T++ LI
Sbjct: 395 NLCN--------PDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQR 446
Query: 255 CGGTENVEGAIEILKSMGDAGIKP 278
E A + + M I P
Sbjct: 447 LCRANMCEWAYCLFEEMISQDITP 470
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/222 (21%), Positives = 97/222 (43%), Gaps = 17/222 (7%)
Query: 131 GCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKM--LGSFGEGYNSNLKQGSIHNAT 188
G + ++ +++ + +A ++DR F +G+K+ L + + G A
Sbjct: 116 GHKHSSDAYDMAVDILGKAKKWDRMKEFVERMRGDKLVTLNTVAKIMRRFAGAGEWEEAV 175
Query: 189 TVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYY--HAKALINEMKTVGLSPNQI 246
+ + F T + N LL + A+ ++ ++K+ ++PN
Sbjct: 176 GIFDRLGE---------FGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLKS-HITPNAH 225
Query: 247 TWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEM 306
T++I I VE A+ ++ M G +P VI+YTT I+ + F + + EM
Sbjct: 226 TFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEM 285
Query: 307 KSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAG 348
++ PN +TY T++ S + E ++ L + M+++G
Sbjct: 286 EANGSPPNSITYTTIM---SSLNAQKEFEEALRVATRMKRSG 324
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 73/311 (23%), Positives = 136/311 (43%), Gaps = 29/311 (9%)
Query: 43 VDLAQDMYKELKHLESVGRLKLDVF----TYSTIIKVFADAKLWQMALKVKHDMRSAGVN 98
VD+ K + E V R++ D T + I++ FA A W+ A+ + + G+
Sbjct: 128 VDILGKAKKWDRMKEFVERMRGDKLVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLE 187
Query: 99 LNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRF 158
NT + + L++ VEQA + + L + PN FNI +H +A + + A
Sbjct: 188 KNTESMNLLLDTLCKEKRVEQARVVLLQ-LKSHITPNAHTFNIFIHGWCKANRVEEAL-- 244
Query: 159 FHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNS-------QILSFTERFPFTPT 211
W +M G G+ + + + TT+ + ++LS E P
Sbjct: 245 ---WTIQEMK---GHGF-----RPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPN 293
Query: 212 TSTYNTLLKACGS--DYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILK 269
+ TY T++ + + ++ A + MK G P+ + ++ LI +E A + +
Sbjct: 294 SITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFR 353
Query: 270 -SMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEI-HPNWVTYNTLLKARSK 327
M + G+ + Y + I + +A+ L +EM+S + +P+ TY LL++ K
Sbjct: 354 VEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFK 413
Query: 328 YGSVLEVQQCL 338
G V+EV + L
Sbjct: 414 RGDVVEVGKLL 424
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/264 (21%), Positives = 114/264 (43%), Gaps = 21/264 (7%)
Query: 23 LKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGR-LKLDVFTYSTIIKVFADAKL 81
+ P+ ++NI + C A RV+ A +E+K G + V +Y+TII+ +
Sbjct: 220 ITPNAHTFNIFIHGWCKANRVEEALWTIQEMK-----GHGFRPCVISYTTIIRCYCQQFE 274
Query: 82 WQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNI 141
+ ++ +M + G N++ +++++++ E+A+++ M +GC+P++ +N
Sbjct: 275 FIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNC 334
Query: 142 ILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHN----ATTVPNGFSNS 197
++H A + + A R F + YNS + H+ A + +S
Sbjct: 335 LIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESS 394
Query: 198 QILSFTERFPFTPTTSTYNTLLKAC--GSDYYHAKALINEMKTV-GLSPNQITWSILIDI 254
+ + P TY LL++C D L+ EM T LS ++ T++ LI
Sbjct: 395 NLCN--------PDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQR 446
Query: 255 CGGTENVEGAIEILKSMGDAGIKP 278
E A + + M I P
Sbjct: 447 LCRANMCEWAYCLFEEMISQDITP 470
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/222 (21%), Positives = 97/222 (43%), Gaps = 17/222 (7%)
Query: 131 GCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKM--LGSFGEGYNSNLKQGSIHNAT 188
G + ++ +++ + +A ++DR F +G+K+ L + + G A
Sbjct: 116 GHKHSSDAYDMAVDILGKAKKWDRMKEFVERMRGDKLVTLNTVAKIMRRFAGAGEWEEAV 175
Query: 189 TVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYY--HAKALINEMKTVGLSPNQI 246
+ + F T + N LL + A+ ++ ++K+ ++PN
Sbjct: 176 GIFDRLGE---------FGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLKS-HITPNAH 225
Query: 247 TWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEM 306
T++I I VE A+ ++ M G +P VI+YTT I+ + F + + EM
Sbjct: 226 TFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEM 285
Query: 307 KSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAG 348
++ PN +TY T++ S + E ++ L + M+++G
Sbjct: 286 EANGSPPNSITYTTIM---SSLNAQKEFEEALRVATRMKRSG 324
>AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18256086-18257975 FORWARD
LENGTH=629
Length = 629
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/391 (18%), Positives = 155/391 (39%), Gaps = 65/391 (16%)
Query: 12 LNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYST 71
L ++ + G+ P++ +YN++ +A + ++A + YK L + T+
Sbjct: 150 LQLHGFINQAGIAPNIITYNLIFQAYLDVRKPEIALEHYK---LFIDNAPLNPSIATFRI 206
Query: 72 IIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEM---- 127
++K + A+++K DM G ++ V +S L+ C + ++L++E+
Sbjct: 207 LVKGLVSNDNLEKAMEIKEDMAVKGFVVDPVVYSYLMMGCVKNSDADGVLKLYQELKEKL 266
Query: 128 ------------LLAG-----------------------CEPNTQCFNIILHACVEACQY 152
L+ G + +N +L A E ++
Sbjct: 267 GGFVDDGVVYGQLMKGYFMKEMEKEAMECYEEAVGENSKVRMSAMAYNYVLEALSENGKF 326
Query: 153 DRAFRFFHSWKGNKM--------LGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTE 204
D A + F + K LG+F N G A V +
Sbjct: 327 DEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFEEAMEVFRQMGD-------- 378
Query: 205 RFPFTPTTSTYNTLL-KACGSDYY-HAKALINEMKTVGLSPNQITWSILIDICGGTENVE 262
F +P T ++N L+ + C ++ A+ L EM+ + P++ T+ +L+D C ++
Sbjct: 379 -FKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLMDTCFKEGKID 437
Query: 263 GAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLL 322
K+M ++ ++P++ Y +++ A + ++ M S ++ + Y ++
Sbjct: 438 EGAAYYKTMVESNLRPNLAVYNRLQDQLIKAGKLDDAKSFFDMMVS-KLKMDDEAYKFIM 496
Query: 323 KARSKYGSVLEVQQCLAIYQDMQKAGYVRLC 353
+A S+ G + E+ L I +M VR+
Sbjct: 497 RALSEAGRLDEM---LKIVDEMLDDDTVRVS 524
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 108/228 (47%), Gaps = 28/228 (12%)
Query: 107 LINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQ--YDRAF-RFFH--- 160
+I ACA G ++++ F EM G + + I+ + ++A + DR F + H
Sbjct: 88 MIGACARNGYYQESLDFFREMYKDGLKLDA----FIVPSLLKASRNLLDREFGKMIHCLV 143
Query: 161 ---SWKGNK-MLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYN 216
S++ + ++ S + Y+ K G + NA V FS+ L + F S Y
Sbjct: 144 LKFSYESDAFIVSSLIDMYS---KFGEVGNARKV---FSD---LGEQDLVVFNAMISGY- 193
Query: 217 TLLKACGSDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGI 276
A S A L+ +MK +G+ P+ ITW+ LI N E EIL+ M G
Sbjct: 194 ----ANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEILELMCLDGY 249
Query: 277 KPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKA 324
KPDV+++T+ I V + ++A +++M + ++PN T TLL A
Sbjct: 250 KPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPA 297
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/302 (21%), Positives = 126/302 (41%), Gaps = 45/302 (14%)
Query: 65 DVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLF 124
D+ ++ +I +A+ AL + DM+ G+ + + W++LI+ +H E+ ++
Sbjct: 182 DLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEIL 241
Query: 125 EEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSN------ 178
E M L G +P+ + I+ V Q ++AF F K + + G NS
Sbjct: 242 ELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAF------KQMLTHGLYPNSATIITLL 295
Query: 179 --------LKQG-SIHNATTV----PNGFSNSQILSFTER----------FPFTP--TTS 213
+K G IH + V +GF S +L + F TP TT
Sbjct: 296 PACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKKTTV 355
Query: 214 TYNTLLKACGSDYYHAKA--LINEMKTVGLSPNQITWSILIDIC--GGTENVEGAIEILK 269
T+N+++ + KA L ++M+ G + +T++ ++ C G ++ G L
Sbjct: 356 TFNSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFTAILTACSHAGLTDL-GQNLFLL 414
Query: 270 SMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYG 329
I P + Y + + + +A YE +K+ + P+ + LL A +G
Sbjct: 415 MQNKYRIVPRLEHYACMVDLLGRAGKLVEA---YEMIKAMRMEPDLFVWGALLAACRNHG 471
Query: 330 SV 331
++
Sbjct: 472 NM 473
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 87/401 (21%), Positives = 160/401 (39%), Gaps = 74/401 (18%)
Query: 15 YQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIK 74
Y+ M + G++PD +Y +LKAC V + ++ ++ V K ++ + +I
Sbjct: 132 YKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIE----VSSYKSSLYVCNALIS 187
Query: 75 VFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEP 134
++ + +A ++ M + V+W+++IN A G+ +A +LF++M +G E
Sbjct: 188 MYKRFRNMGIARRLFDRM----FERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEV 243
Query: 135 NTQCFNIILHACVEACQYDRAF------RFFHS----------WKGNKMLGSFGEGYNSN 178
+ +NII C++ Y A R F + K ++G+ G
Sbjct: 244 SVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLG--KE 301
Query: 179 LKQGSIHNATTVPNGFSNSQILSFTE---------RFPFTPTTS--TYNTLLKACG--SD 225
+ +IH++ + N+ I +++ F T S T+N+++ +
Sbjct: 302 IHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNK 361
Query: 226 YYHAKALINEMKTVGLSPNQITWSILIDICGGTENVE----------------------- 262
A L+ EM G PN IT + ++ +C N++
Sbjct: 362 SEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWN 421
Query: 263 ---------GAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHP 313
G I K + D K D + YT+ I AL L++EM I P
Sbjct: 422 SLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKP 481
Query: 314 NWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYVRLCL 354
+ VT +L A S V E ++ ++ MQ +R CL
Sbjct: 482 DHVTVVAVLSACSHSKLVHEGER---LFMKMQCEYGIRPCL 519
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 78/327 (23%), Positives = 133/327 (40%), Gaps = 31/327 (9%)
Query: 11 TLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYS 70
L + M+N D + I LKAC + G + L ++++ H G + +
Sbjct: 264 ALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIHGLAIHSSYDGIDNVR----N 319
Query: 71 TIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLA 130
T+I +++ K + AL V R N + W+S+I+ A E+A L EML+A
Sbjct: 320 TLITMYSKCKDLRHALIV---FRQTEEN-SLCTWNSIISGYAQLNKSEEASHLLREMLVA 375
Query: 131 GCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNL----KQGSIHN 186
G +PN+ IL C F K + +NS + K G I
Sbjct: 376 GFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVA 435
Query: 187 ATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYH--AKALINEMKTVGLSPN 244
A V S ++S + TY +L+ G+ A AL EM G+ P+
Sbjct: 436 AKQV------SDLMSKRDEV-------TYTSLIDGYGNQGEGGVALALFKEMTRSGIKPD 482
Query: 245 QITWSILIDICGGTENV-EGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLY 303
+T ++ C ++ V EG +K + GI+P + ++ + + + +A +
Sbjct: 483 HVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDII 542
Query: 304 EEMKSCEIHPNWVTYNTLLKARSKYGS 330
M P+ T+ TLL A +G+
Sbjct: 543 HNMP---YKPSGATWATLLNACHIHGN 566
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 101/237 (42%), Gaps = 24/237 (10%)
Query: 99 LNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRF 158
L+ + W+ LI + A L E+ I ++ M+ G P+ + +L AC E D AF
Sbjct: 107 LHPLPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGET--LDVAF-- 162
Query: 159 FHSWKGNKMLGSFG-EGYNSNLKQGSIHNA-TTVPNGFSNSQILSFTERFPFTPTTSTYN 216
G + GS Y S+L + NA ++ F N I F ++N
Sbjct: 163 -----GRVVHGSIEVSSYKSSLY---VCNALISMYKRFRNMGIARRLFDRMFERDAVSWN 214
Query: 217 TLLKACGSD--YYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDA 274
++ S+ + A L ++M G+ + ITW+I+ C T N GA+ ++ M +
Sbjct: 215 AVINCYASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNF 274
Query: 275 GIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWV----TYNTLLKARSK 327
D +A +K C + A+ L +E+ IH ++ NTL+ SK
Sbjct: 275 PTSLDPVAMIIGLKAC----SLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSK 327
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 104/214 (48%), Gaps = 18/214 (8%)
Query: 12 LNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYST 71
L++++ MQ LKP+ + +L +C + G +DL + ++K K +K++ +
Sbjct: 215 LSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVN----TA 270
Query: 72 IIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAG 131
+I +FA A+ + MR +T AWS++I A A+ G E+++ +FE M
Sbjct: 271 LIDMFAKCGSLDDAVSIFEKMRYK----DTQAWSAMIVAYANHGKAEKSMLMFERMRSEN 326
Query: 132 CEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQ-GSIHNATTV 190
+P+ F +L+AC + + ++F ++M+ F G ++K GS+ + +
Sbjct: 327 VQPDEITFLGLLNACSHTGRVEEGRKYF-----SQMVSKF--GIVPSIKHYGSMVDLLSR 379
Query: 191 PNGFSNSQILSFTERFPFTPTTSTYNTLLKACGS 224
++ F ++ P +PT + LL AC S
Sbjct: 380 AGNLEDA--YEFIDKLPISPTPMLWRILLAACSS 411
>AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9605650-9609625 FORWARD
LENGTH=1038
Length = 1038
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 106/250 (42%), Gaps = 48/250 (19%)
Query: 100 NTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFF 159
+ V ++ ++ G ++ A + F EML GCEP+ +L C Y R R
Sbjct: 187 SVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVACGTML------CTYARWGR-- 238
Query: 160 HSWKGNKMLGSFGEGYNSNLKQGSIHNAT-TVPNGFSNSQILSFTERFPFTPTTSTYNTL 218
H+A T +IL +TS YN +
Sbjct: 239 -------------------------HSAMLTFYKAVQERRILL---------STSVYNFM 264
Query: 219 LKACGSDYYHAKA--LINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGI 276
L + +H K L EM G+ PN+ T+++++ E A++ M G
Sbjct: 265 LSSLQKKSFHGKVIDLWLEMVEEGVPPNEFTYTLVVSSYAKQGFKEEALKAFGEMKSLGF 324
Query: 277 KPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQ 336
P+ + Y++ I + V++ ++++A+ LYE+M+S I P+ T T+L S Y +
Sbjct: 325 VPEEVTYSSVISLSVKAGDWEKAIGLYEDMRSQGIVPSNYTCATML---SLYYKTENYPK 381
Query: 337 CLAIYQDMQK 346
L+++ DM++
Sbjct: 382 ALSLFADMER 391
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 84/153 (54%), Gaps = 4/153 (2%)
Query: 8 LTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVF 67
++ L+++ MQ G+KP SYN+++K C + L ++ + L+ +E GR D+
Sbjct: 860 MSEALSLFSEMQKKGIKPGTPSYNMMVKICATS---RLHHEVDELLQAMERNGRCT-DLS 915
Query: 68 TYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEM 127
TY T+I+V+A++ + A K ++ G+ L+ +SSL++A AG++E+A + + +M
Sbjct: 916 TYLTLIQVYAESSQFAEAEKTITLVKEKGIPLSHSHFSSLLSALVKAGMMEEAERTYCKM 975
Query: 128 LLAGCEPNTQCFNIILHACVEACQYDRAFRFFH 160
AG P++ C IL + ++ F+
Sbjct: 976 SEAGISPDSACKRTILKGYMTCGDAEKGILFYE 1008
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 116/275 (42%), Gaps = 11/275 (4%)
Query: 67 FTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEE 126
FTY+ ++ +A + ALK +M+S G V +SS+I+ AG E+AI L+E+
Sbjct: 294 FTYTLVVSSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYED 353
Query: 127 MLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHN 186
M G P+ +L + Y +A F + NK+ + +G I
Sbjct: 354 MRSQGIVPSNYTCATMLSLYYKTENYPKALSLFADMERNKIPA-------DEVIRGLIIR 406
Query: 187 ATTVPNGFSNSQ-ILSFTERFPFTPTTSTYNTLLKACGSDYYHAKAL--INEMKTVGLSP 243
F ++Q + TER TY + + + KAL I MKT +
Sbjct: 407 IYGKLGLFHDAQSMFEETERLNLLADEKTYLAMSQVHLNSGNVVKALDVIEMMKTRDIPL 466
Query: 244 NQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLY 303
++ + +++ +NV+ A E +++ G+ PD + + + ++A
Sbjct: 467 SRFAYIVMLQCYAKIQNVDCAEEAFRALSKTGL-PDASSCNDMLNLYTRLNLGEKAKGFI 525
Query: 304 EEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCL 338
+++ ++H + Y T ++ K G V E Q +
Sbjct: 526 KQIMVDQVHFDIELYKTAMRVYCKEGMVAEAQDLI 560
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 115/283 (40%), Gaps = 47/283 (16%)
Query: 26 DMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMA 85
D YN L+KA AG++ A ++Y+ + H V + TY+T+I V+ A
Sbjct: 773 DTVGYNTLIKAMLEAGKLQCASEIYERM-HTSGV---PCSIQTYNTMISVYGRGLQLDKA 828
Query: 86 LKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHA 145
+++ + R +G+ L+ ++++I G + +A+ LF EM G +P T +N+++
Sbjct: 829 IEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMVKI 888
Query: 146 CVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTER 205
C + R H ++L ER
Sbjct: 889 CATS-------RLHHEV----------------------------------DELLQAMER 907
Query: 206 FPFTPTTSTYNTLLK--ACGSDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEG 263
STY TL++ A S + A+ I +K G+ + +S L+ +E
Sbjct: 908 NGRCTDLSTYLTLIQVYAESSQFAEAEKTITLVKEKGIPLSHSHFSSLLSALVKAGMMEE 967
Query: 264 AIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEM 306
A M +AGI PD T +K + + ++ + YE+M
Sbjct: 968 AERTYCKMSEAGISPDSACKRTILKGYMTCGDAEKGILFYEKM 1010
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 64/293 (21%), Positives = 122/293 (41%), Gaps = 27/293 (9%)
Query: 62 LKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWS---SLINACAHAGLVE 118
L+++ T +T+I V+ Q LK + A T S S+I+A G +E
Sbjct: 666 LRMEEETIATLIAVYGR----QHKLKEAKRLYLAAGESKTPGKSVIRSMIDAYVRCGWLE 721
Query: 119 QAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHS-WKGNKMLGSFGEGYNS 177
A LF E GC+P +I+++A ++ A + + N L + G YN+
Sbjct: 722 DAYGLFMESAEKGCDPGAVTISILVNALTNRGKHREAEHISRTCLEKNIELDTVG--YNT 779
Query: 178 NLKQ----GSIHNATTVPNGFSNSQILSFTERFPFTP-TTSTYNTLLKACGSDYYHAKAL 232
+K G + A+ + S + P + TYNT++ G KA+
Sbjct: 780 LIKAMLEAGKLQCASEIYERMHTSGV----------PCSIQTYNTMISVYGRGLQLDKAI 829
Query: 233 --INEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVC 290
+ + GL ++ ++ +I G + A+ + M GIKP +Y +K+C
Sbjct: 830 EIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMVKIC 889
Query: 291 VESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQD 343
S+ + L + M+ + TY TL++ ++ E ++ + + ++
Sbjct: 890 ATSRLHHEVDELLQAMERNGRCTDLSTYLTLIQVYAESSQFAEAEKTITLVKE 942
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 68/145 (46%), Gaps = 11/145 (7%)
Query: 209 TPTTSTYNTLLKA---CG--SDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEG 263
TP S +++ A CG D Y L E G P +T SIL++
Sbjct: 701 TPGKSVIRSMIDAYVRCGWLEDAY---GLFMESAEKGCDPGAVTISILVNALTNRGKHRE 757
Query: 264 AIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLK 323
A I ++ + I+ D + Y T IK +E+ + A +YE M + + + TYNT++
Sbjct: 758 AEHISRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMI- 816
Query: 324 ARSKYGSVLEVQQCLAIYQDMQKAG 348
S YG L++ + + I+ + +++G
Sbjct: 817 --SVYGRGLQLDKAIEIFSNARRSG 839
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/332 (18%), Positives = 137/332 (41%), Gaps = 58/332 (17%)
Query: 22 GLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESV---GRLKLDVFTYSTIIKVFAD 78
G P + +IL+ A G+ ++E +H+ ++LD Y+T+IK +
Sbjct: 734 GCDPGAVTISILVNALTNRGK-------HREAEHISRTCLEKNIELDTVGYNTLIKAMLE 786
Query: 79 AKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQC 138
A Q A ++ M ++GV + ++++I+ +++AI++F +G + +
Sbjct: 787 AGKLQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDKAIEIFSNARRSGLYLDEKI 846
Query: 139 F-NIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNS 197
+ N+I+H +G+G G + A ++ FS
Sbjct: 847 YTNMIMH--------------------------YGKG-------GKMSEALSL---FSEM 870
Query: 198 QILSFTERFPFTPTTSTYNTLLKACGSDYYHAKA--LINEMKTVGLSPNQITWSILIDIC 255
Q + P T +YN ++K C + H + L+ M+ G + T+ LI +
Sbjct: 871 Q------KKGIKPGTPSYNMMVKICATSRLHHEVDELLQAMERNGRCTDLSTYLTLIQVY 924
Query: 256 GGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNW 315
+ A + + + + GI +++ + V++ ++A Y +M I P+
Sbjct: 925 AESSQFAEAEKTITLVKEKGIPLSHSHFSSLLSALVKAGMMEEAERTYCKMSEAGISPDS 984
Query: 316 VTYNTLLKARSKYGSVLEVQQCLAIYQDMQKA 347
T+LK Y + + ++ + Y+ M ++
Sbjct: 985 ACKRTILKG---YMTCGDAEKGILFYEKMIRS 1013
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 130/310 (41%), Gaps = 57/310 (18%)
Query: 26 DMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMA 85
D ++N+++ C +D A++++ + DV T++ +I + + + A
Sbjct: 208 DQVAWNVMITGCLKCKEMDSARELFDRFT--------EKDVVTWNAMISGYVNCGYPKEA 259
Query: 86 LKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHA 145
L + +MR AG + + V SL++ACA G +E +L I+ A
Sbjct: 260 LGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLH--------------IYILETA 305
Query: 146 CVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTER 205
V + Y G + + + Y K GSI A V G + +
Sbjct: 306 SVSSSIY----------VGTPIWNALIDMY---AKCGSIDRAIEVFRGVKDRDL------ 346
Query: 206 FPFTPTTSTYNTLLKACGSDYYHAKA---LINEMKTVGLSPNQITWSILIDICGGTENVE 262
ST+NTL+ G +HA+ + EM+ + + PN++T+ +I C + V+
Sbjct: 347 -------STWNTLI--VGLALHHAEGSIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVD 397
Query: 263 GAIEILKSMGDA-GIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTL 321
+ M D I+P++ Y + + + ++A E MK I PN + + TL
Sbjct: 398 EGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESMK---IEPNAIVWRTL 454
Query: 322 LKARSKYGSV 331
L A YG+V
Sbjct: 455 LGACKIYGNV 464
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 74/335 (22%), Positives = 144/335 (42%), Gaps = 51/335 (15%)
Query: 17 IMQNLGLKP--DMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIK 74
+++ +G K M ++ I +KA A A +++ +K + K+ V T + ++
Sbjct: 217 VLEEMGTKGLLTMETFTIAMKAFAAAKERKKAVGIFELMKKY----KFKIGVETINCLLD 272
Query: 75 VFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINA-CAHAGLVEQAIQLFEEMLLAGCE 133
AKL + A +V D N + ++ L+N C L+E A +++ +M+ G +
Sbjct: 273 SLGRAKLGKEA-QVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIE-AARIWNDMIDQGLK 330
Query: 134 PNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNG 193
P+ N++L + + + A + FH K +G N++ +I
Sbjct: 331 PDIVAHNVMLEGLLRSRKKSDAIKLFHVMKS--------KGPCPNVRSYTI--------- 373
Query: 194 FSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKALINEMKTVGLSPNQITWSILID 253
I F ++ S+ T + +Y+ ++M GL P+ ++ LI
Sbjct: 374 ----MIRDFCKQ-------SSMETAI-----EYF------DDMVDSGLQPDAAVYTCLIT 411
Query: 254 ICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHP 313
G + ++ E+LK M + G PD Y IK+ K + A +Y +M EI P
Sbjct: 412 GFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEP 471
Query: 314 NWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAG 348
+ T+N ++K+ Y + A++++M K G
Sbjct: 472 SIHTFNMIMKS---YFMARNYEMGRAVWEEMIKKG 503
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/308 (22%), Positives = 122/308 (39%), Gaps = 51/308 (16%)
Query: 19 QNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFAD 78
+ G D +YN ++ + + + M L+ + + G L ++ FT + +K FA
Sbjct: 187 ERQGFAHDSRTYNSMM---SILAKTRQFETMVSVLEEMGTKGLLTMETFTIA--MKAFAA 241
Query: 79 AKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQC 138
AK + A+ + M+ + + L+++ A L ++A LF++ L PN
Sbjct: 242 AKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDK-LKERFTPNMMT 300
Query: 139 FNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQ 198
+ ++L+ W + L +N + QG
Sbjct: 301 YTVLLNG----------------WCRVRNLIEAARIWNDMIDQG---------------- 328
Query: 199 ILSFTERFPFTPTTSTYNTLLKACGSDYYHAKA--LINEMKTVGLSPNQITWSILI-DIC 255
P +N +L+ + A L + MK+ G PN +++I+I D C
Sbjct: 329 ---------LKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFC 379
Query: 256 GGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNW 315
+ ++E AIE M D+G++PD YT I K L +EM+ P+
Sbjct: 380 KQS-SMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDG 438
Query: 316 VTYNTLLK 323
TYN L+K
Sbjct: 439 KTYNALIK 446
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/325 (19%), Positives = 130/325 (40%), Gaps = 25/325 (7%)
Query: 5 SRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKL 64
+++ + I+++M+ K + + N LL + A AQ ++ +LK R
Sbjct: 242 AKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKE-----RFTP 296
Query: 65 DVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLF 124
++ TY+ ++ + + A ++ +DM G+ + VA + ++ + AI+LF
Sbjct: 297 NMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLF 356
Query: 125 EEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFG------EGYNSN 178
M G PN + + I++ + + A +F + + G+ +
Sbjct: 357 HVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQ 416
Query: 179 LKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYY--HAKALINEM 236
K +++ ++L + P TYN L+K + HA + N+M
Sbjct: 417 KKLDTVY------------ELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKM 464
Query: 237 KTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNF 296
+ P+ T+++++ N E + + M GI PD +YT I+ +
Sbjct: 465 IQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKS 524
Query: 297 KQALTLYEEMKSCEIHPNWVTYNTL 321
++A EEM + + YN
Sbjct: 525 REACRYLEEMLDKGMKTPLIDYNKF 549
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 75/358 (20%), Positives = 141/358 (39%), Gaps = 75/358 (20%)
Query: 5 SRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESV-GRLK 63
++D L+++ M +G +P +++ LK+CCV EL+ L SV R+
Sbjct: 394 NKDGPICLSLFLQMLQMGFRPTEYTFSTALKSCCVT-----------ELQQLHSVIVRMG 442
Query: 64 LDVFTY--STIIKVFADAKLWQMALKV---------------------KHDMRSAGVNL- 99
+ Y S++++ +A +L AL + + V L
Sbjct: 443 YEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLI 502
Query: 100 ------NTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYD 153
+TV+W+ I AC+ + E+ I+LF+ ML + P+ F IL C + C
Sbjct: 503 STLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLT 562
Query: 154 RA-----------FRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSF 202
F ++ N ++ +G K GSI + V ++
Sbjct: 563 LGSSIHGLITKTDFSCADTFVCNVLIDMYG-------KCGSIRSVMKVFEETREKNLI-- 613
Query: 203 TERFPFTPTTSTYNTLLKACGSDYYHAKAL--INEMKTVGLSPNQITWSILIDICGGTEN 260
T+ L+ G Y +AL E ++G P+++++ ++ C
Sbjct: 614 -----------TWTALISCLGIHGYGQEALEKFKETLSLGFKPDRVSFISILTACRHGGM 662
Query: 261 VEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTY 318
V+ + + + M D G++P++ Y A+ + + K+A L EM P W T+
Sbjct: 663 VKEGMGLFQKMKDYGVEPEMDHYRCAVDLLARNGYLKEAEHLIREMPFPADAPVWRTF 720
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/326 (19%), Positives = 140/326 (42%), Gaps = 61/326 (18%)
Query: 3 VNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRL 62
+NS +T + ++ + +PD S+N ++K AG++D+A +++++ ++
Sbjct: 157 INSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAI--- 213
Query: 63 KLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQ 122
+++T+I + A + + AL++ H+M+++ V + V+ ++ ++ACA G +EQ
Sbjct: 214 -----SWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKW 268
Query: 123 LFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQG 182
+ + ++ +++ + + + A F N+K+
Sbjct: 269 IHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVF-----------------KNIKKK 311
Query: 183 SIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKALIN---EMKTV 239
S+ T + +G++ + H + I+ EM+ +
Sbjct: 312 SVQAWTALISGYAY-----------------------------HGHGREAISKFMEMQKM 342
Query: 240 GLSPNQITWSILIDICGGTENVEGAIEILKSM-GDAGIKPDVIAYTTAIKVCVESKNFKQ 298
G+ PN IT++ ++ C T VE I SM D +KP + Y + + + +
Sbjct: 343 GIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDE 402
Query: 299 ALTLYEEMKSCEIHPNWVTYNTLLKA 324
A +EM + PN V + LLKA
Sbjct: 403 AKRFIQEMP---LKPNAVIWGALLKA 425
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 93/215 (43%), Gaps = 24/215 (11%)
Query: 12 LNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYST 71
L ++ MQN ++PD S L AC G ++ + ++ L R+++D
Sbjct: 232 LQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKT----RIRMDSVLGCV 287
Query: 72 IIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAG 131
+I ++A + AL+V +++ V AW++LI+ A+ G +AI F EM G
Sbjct: 288 LIDMYAKCGEMEEALEVFKNIKKKSVQ----AWTALISGYAYHGHGREAISKFMEMQKMG 343
Query: 132 CEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVP 191
+PN F +L AC + F+S + + NLK +I + +
Sbjct: 344 IKPNVITFTAVLTACSYTGLVEEGKLIFYSME-----------RDYNLKP-TIEHYGCIV 391
Query: 192 NGFSNSQILSFTERF----PFTPTTSTYNTLLKAC 222
+ + +L +RF P P + LLKAC
Sbjct: 392 DLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKAC 426
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/287 (21%), Positives = 108/287 (37%), Gaps = 46/287 (16%)
Query: 25 PDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQM 84
PD Y L+K GRV M + ++ + D TY+T++ F +A L
Sbjct: 412 PDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNS-HPDEVTYTTVVSAFVNAGLMDR 470
Query: 85 ALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLL-AGCEPNTQCFNIIL 143
A +V +M GV N + ++ L+ +++A L EM AG EP+ +NII+
Sbjct: 471 ARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIII 530
Query: 144 HACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFT 203
C+ A FF+ + +
Sbjct: 531 DGCILIDDSAGALAFFNEMRTRGI------------------------------------ 554
Query: 204 ERFPFTPTTSTYNTLLKA---CGSDYYHAKALINEMKTVGLSPNQITWSILIDICGGTEN 260
PT +Y TL+KA G + M + + I W++L++
Sbjct: 555 -----APTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGL 609
Query: 261 VEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMK 307
+E A ++ M + G P+V Y + +++ AL L++E+K
Sbjct: 610 IEDAQRVVSRMKENGFYPNVATYGSLANGVSQARKPGDALLLWKEIK 656
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 65/118 (55%), Gaps = 3/118 (2%)
Query: 210 PTTSTYNTLLKAC--GSDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEI 267
P TY T++ A A+ ++ EM +G+ N+IT+++L+ ++ A ++
Sbjct: 450 PDEVTYTTVVSAFVNAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDL 509
Query: 268 LKSMG-DAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKA 324
L+ M DAGI+PDV++Y I C+ + AL + EM++ I P ++Y TL+KA
Sbjct: 510 LREMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKA 567
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 70/321 (21%), Positives = 128/321 (39%), Gaps = 61/321 (19%)
Query: 3 VNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRL 62
VN+ + + M +G+ + +YN+LLK C ++D A+D+ +E+ E G +
Sbjct: 463 VNAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMT--EDAG-I 519
Query: 63 KLDVFTYSTIIK--VFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQA 120
+ DV +Y+ II + D AL ++MR+ G+ +++++L+ A A +G + A
Sbjct: 520 EPDVVSYNIIIDGCILIDDSAG--ALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLA 577
Query: 121 IQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLK 180
++F+EM+ +P + I + V EGY +
Sbjct: 578 NRVFDEMM---NDPRVKVDLIAWNMLV-------------------------EGY---CR 606
Query: 181 QGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKALINEMKTVG 240
G I +A +++S + F P +TY +L AL
Sbjct: 607 LGLIEDA---------QRVVSRMKENGFYPNVATYGSLANGVSQARKPGDAL-------- 649
Query: 241 LSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQAL 300
+ W + + C + E + +KPD T +CV + FK+AL
Sbjct: 650 -----LLWKEIKERC-AVKKKEAPSDSSSDPAPPMLKPDEGLLDTLADICVRAAFFKKAL 703
Query: 301 TLYEEMKSCEIHPNWVTYNTL 321
+ M+ I PN Y +
Sbjct: 704 EIIACMEENGIPPNKTKYKKI 724
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 83/173 (47%), Gaps = 14/173 (8%)
Query: 188 TTVPNGFSNS-------QILSFTERFPFTPTTSTYNTLLKA-CGS-DYYHAKALINEM-K 237
TTV + F N+ Q+L+ R TYN LLK C A+ L+ EM +
Sbjct: 456 TTVVSAFVNAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTE 515
Query: 238 TVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFK 297
G+ P+ ++++I+ID C ++ GA+ M GI P I+YTT +K S K
Sbjct: 516 DAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPK 575
Query: 298 QALTLYEE-MKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGY 349
A +++E M + + + +N L++ + G + + Q+ + M++ G+
Sbjct: 576 LANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQR---VVSRMKENGF 625
>AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397578
FORWARD LENGTH=563
Length = 563
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/253 (21%), Positives = 110/253 (43%), Gaps = 14/253 (5%)
Query: 104 WSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNII----LHACVEACQYDRAFRFF 159
+S LI+ G A+ LF EM +GC P+ +N + LH +A ++ +
Sbjct: 136 YSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEKVRGYL 195
Query: 160 HSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLL 219
KG + YN L+ + N +S P +P T+N ++
Sbjct: 196 DKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMS-----PVSPDVYTFNGVM 250
Query: 220 KACGSD--YYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIK 277
A G + +A++ M++ P+ IT+++LID G + E + KS+ + K
Sbjct: 251 DAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEK 310
Query: 278 PDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQC 337
P + + + I +++ +A ++++M P+++TY ++ YG V +
Sbjct: 311 PTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMM---YGYCGSVSRA 367
Query: 338 LAIYQDMQKAGYV 350
I++++ ++ V
Sbjct: 368 REIFEEVGESDRV 380
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/277 (21%), Positives = 114/277 (41%), Gaps = 30/277 (10%)
Query: 24 KPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQ 83
+P++ +YNILL+A +G+VD ++K+L + + DV+T++ ++ + + +
Sbjct: 205 QPNVVTYNILLRAFAQSGKVDQVNALFKDL----DMSPVSPDVYTFNGVMDAYGKNGMIK 260
Query: 84 MALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIIL 143
V MRS + + ++ LI++ E+ Q F+ ++ + +P FN ++
Sbjct: 261 EMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMI 320
Query: 144 HACVEACQYDRAFRFFHSWKGNKMLGSFGE--------GYNSNLKQGSIHNATTVPNGFS 195
+A D+A F + SF GY GS+ A +
Sbjct: 321 INYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYC-----GSVSRAREIFEEVG 375
Query: 196 NS-QILSFTERFPFTPTTSTYNTLLKA-CGSDYY-HAKALINEMKTVGLSPNQITWSILI 252
S ++L ST N +L+ C + Y A L + + P+ T+ L
Sbjct: 376 ESDRVLK----------ASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLY 425
Query: 253 DICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKV 289
+ E ++K M GI P+ + A++V
Sbjct: 426 KAYTKADMKEQVQILMKKMEKDGIVPNKRFFLEALEV 462
>AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397393
FORWARD LENGTH=510
Length = 510
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/253 (21%), Positives = 110/253 (43%), Gaps = 14/253 (5%)
Query: 104 WSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNII----LHACVEACQYDRAFRFF 159
+S LI+ G A+ LF EM +GC P+ +N + LH +A ++ +
Sbjct: 136 YSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEKVRGYL 195
Query: 160 HSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLL 219
KG + YN L+ + N +S P +P T+N ++
Sbjct: 196 DKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMS-----PVSPDVYTFNGVM 250
Query: 220 KACGSD--YYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIK 277
A G + +A++ M++ P+ IT+++LID G + E + KS+ + K
Sbjct: 251 DAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEK 310
Query: 278 PDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQC 337
P + + + I +++ +A ++++M P+++TY ++ YG V +
Sbjct: 311 PTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMM---YGYCGSVSRA 367
Query: 338 LAIYQDMQKAGYV 350
I++++ ++ V
Sbjct: 368 REIFEEVGESDRV 380
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 59/277 (21%), Positives = 114/277 (41%), Gaps = 30/277 (10%)
Query: 24 KPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQ 83
+P++ +YNILL+A +G+VD ++K+L + + DV+T++ ++ + + +
Sbjct: 205 QPNVVTYNILLRAFAQSGKVDQVNALFKDL----DMSPVSPDVYTFNGVMDAYGKNGMIK 260
Query: 84 MALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIIL 143
V MRS + + ++ LI++ E+ Q F+ ++ + +P FN ++
Sbjct: 261 EMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMI 320
Query: 144 HACVEACQYDRAFRFFHSWKGNKMLGSFGE--------GYNSNLKQGSIHNATTVPNGFS 195
+A D+A F + SF GY GS+ A +
Sbjct: 321 INYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYC-----GSVSRAREIFEEVG 375
Query: 196 NS-QILSFTERFPFTPTTSTYNTLLKA-CGSDYY-HAKALINEMKTVGLSPNQITWSILI 252
S ++L ST N +L+ C + Y A L + + P+ T+ L
Sbjct: 376 ESDRVLK----------ASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLY 425
Query: 253 DICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKV 289
+ E ++K M GI P+ + A++V
Sbjct: 426 KAYTKADMKEQVQILMKKMEKDGIVPNKRFFLEALEV 462
>AT4G35850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16983638-16986681 FORWARD
LENGTH=444
Length = 444
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/307 (20%), Positives = 131/307 (42%), Gaps = 19/307 (6%)
Query: 26 DMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMA 85
D++ YN + + R L +D+Y ++K L+ V + D+F +S ++ A+L A
Sbjct: 40 DLSEYNTAVNSVTAQRRHYLLRDVYDDMK-LDGV-QPTADIF-HSFVVGTMKGARLSD-A 95
Query: 86 LKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHA 145
+ +M++ G+ + ++ LI+ C ++AI++++EM +PN Q F +L+A
Sbjct: 96 FFFREEMKAMGIAPDVNLYNFLISTCGKCKNGKEAIRVYDEMKRYDVKPNGQTFVCLLNA 155
Query: 146 CVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIH---NATTVPNGFSNSQILSF 202
C + Q D + + + G G N G I N P+ S ++IL F
Sbjct: 156 CAVSGQLDLVYAIVRD------MTAAGVGLNQFCYAGLITAHLNKQPRPDNLS-TKILEF 208
Query: 203 TERFPF-----TPTTSTYNTLLKACGSDYYHAKALINEMKTVGLSPNQITWSILIDICGG 257
E+ + S + + + Y+ +T L N + +
Sbjct: 209 VEQSKGWSAIDSSRKSAEDVMFSISEEELYNIPTADYSHRTRFLQRNLTVYHVAFSALAD 268
Query: 258 TENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVT 317
++V+ +L+ + G D ++ + S++F+ L L+++ S + P
Sbjct: 269 LKDVKATEALLEMLKKDGKDTDTYCMLQIMRCYLHSQDFENGLKLFQDYMSADKIPAMEL 328
Query: 318 YNTLLKA 324
Y TL++
Sbjct: 329 YTTLIEG 335
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 68/139 (48%), Gaps = 7/139 (5%)
Query: 213 STYNTLLKACGSD--YYHAKALINEMKTVGLSPN-QITWSILIDICGGTENVEGAIEILK 269
S YNT + + + +Y + + ++MK G+ P I S ++ G + A +
Sbjct: 42 SEYNTAVNSVTAQRRHYLLRDVYDDMKLDGVQPTADIFHSFVVGTMKGAR-LSDAFFFRE 100
Query: 270 SMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYG 329
M GI PDV Y I C + KN K+A+ +Y+EMK ++ PN T+ LL A + G
Sbjct: 101 EMKAMGIAPDVNLYNFLISTCGKCKNGKEAIRVYDEMKRYDVKPNGQTFVCLLNACAVSG 160
Query: 330 SVLEVQQCLAIYQDMQKAG 348
++ AI +DM AG
Sbjct: 161 ---QLDLVYAIVRDMTAAG 176
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 112/274 (40%), Gaps = 53/274 (19%)
Query: 15 YQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELK-------------------- 54
Y+I + L K D+ S+N ++ C + A D+++++
Sbjct: 496 YEIFERLS-KRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACAN 554
Query: 55 -HLESVGR----------LKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVA 103
ES G+ L DV++ ST+I ++A + A+ V M+ N V+
Sbjct: 555 LPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEK----NIVS 610
Query: 104 WSSLINACAHAGLVEQAIQLFEEML-LAGCEPNTQCFNIILHACVEACQYDRAFRFFHSW 162
W+S+I AC + G ++ ++ LF EM+ +G P+ F I+ +C D RFF
Sbjct: 611 WNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFR-- 668
Query: 163 KGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILS----FTERFPFTPTTSTYNTL 218
S E Y +Q H A V + F + L+ + PF P + TL
Sbjct: 669 -------SMTEDYGIQPQQE--HYACVV-DLFGRAGRLTEAYETVKSMPFPPDAGVWGTL 718
Query: 219 LKACGSDYYHAKALINEMKTVGLSPNQITWSILI 252
L AC A + K + L P+ + +LI
Sbjct: 719 LGACRLHKNVELAEVASSKLMDLDPSNSGYYVLI 752
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 102/240 (42%), Gaps = 39/240 (16%)
Query: 100 NTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNII-LHACVEACQYDRAFRF 158
+ V+W+S+I CA + AI +F +M ++G C++ + + A + AC + F
Sbjct: 506 DIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGI-----CYDCVSISAALSACANLPSESF 560
Query: 159 FHSWKGNKMLGSFGEGYNSN-------LKQGSIHNATTVPNGFSNSQILSFTERFPFTPT 211
+ G + S S K G++ A V I+S
Sbjct: 561 GKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVS---------- 610
Query: 212 TSTYNTLLKACGSDYYHAK-----ALINEM-KTVGLSPNQITWSILIDICGGTENVEGAI 265
+N+++ ACG+ H K L +EM + G+ P+QIT+ +I C +V+ +
Sbjct: 611 ---WNSIIAACGN---HGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGV 664
Query: 266 EILKSMG-DAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKA 324
+SM D GI+P Y + + + +A YE +KS P+ + TLL A
Sbjct: 665 RFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEA---YETVKSMPFPPDAGVWGTLLGA 721
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/309 (20%), Positives = 123/309 (39%), Gaps = 26/309 (8%)
Query: 8 LTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHL-ESVGRLKLDV 66
L L Y M G+ PD++++ L+KAC +A +K + L ++V L +D
Sbjct: 119 LNQALAFYFKMLCFGVSPDVSTFPCLVKAC-------VALKNFKGIDFLSDTVSSLGMDC 171
Query: 67 --FTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLF 124
F S++IK + L + V + + + V W+ ++N A G ++ I+ F
Sbjct: 172 NEFVASSLIKAY----LEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGF 227
Query: 125 EEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSI 184
M + PN F+ +L C D + + ++ G + ++K +
Sbjct: 228 SVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQL------HGLVVVSGVDFEGSIKNSLL 281
Query: 185 HNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKAL--INEMKTVGLS 242
+ S++ R T T+N ++ ++L EM + G+
Sbjct: 282 SMYSKCGRFDDASKLFRMMSR----ADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVL 337
Query: 243 PNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTL 302
P+ IT+S L+ EN+E +I + I D+ + I + + A +
Sbjct: 338 PDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNI 397
Query: 303 YEEMKSCEI 311
+ + S ++
Sbjct: 398 FSQCNSVDV 406
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/335 (21%), Positives = 142/335 (42%), Gaps = 51/335 (15%)
Query: 17 IMQNLGLKP--DMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIK 74
+++ +G K M ++ I +KA A A +++ +K + K+ V T + ++
Sbjct: 217 VLEEMGTKGLLTMETFTIAMKAFAAAKERKKAVGIFELMKKY----KFKIGVETINCLLD 272
Query: 75 VFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINA-CAHAGLVEQAIQLFEEMLLAGCE 133
AKL + A +V D N + ++ L+N C L+E A +++ +M+ G +
Sbjct: 273 SLGRAKLGKEA-QVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAA-RIWNDMIDHGLK 330
Query: 134 PNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNG 193
P+ N++L + + + A + FH K +G N++ +I
Sbjct: 331 PDIVAHNVMLEGLLRSMKKSDAIKLFHVMKS--------KGPCPNVRSYTI--------- 373
Query: 194 FSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKALINEMKTVGLSPNQITWSILID 253
I F ++ S+ T + +Y+ ++M GL P+ ++ LI
Sbjct: 374 ----MIRDFCKQ-------SSMETAI-----EYF------DDMVDSGLQPDAAVYTCLIT 411
Query: 254 ICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHP 313
G + ++ E+LK M + G PD Y IK+ K + +Y +M EI P
Sbjct: 412 GFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEP 471
Query: 314 NWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAG 348
+ T+N ++K+ Y + A++ +M K G
Sbjct: 472 SIHTFNMIMKS---YFVARNYEMGRAVWDEMIKKG 503
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 112/261 (42%), Gaps = 16/261 (6%)
Query: 68 TYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEM 127
TY++++ + A + ++ + V +M + G+ L ++ + A A A ++A+ +FE M
Sbjct: 197 TYNSMMSILAKTRQFETMVSVLEEMGTKGL-LTMETFTIAMKAFAAAKERKKAVGIFELM 255
Query: 128 LLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSI--H 185
+ + N +L + A A F K E + N+ ++ +
Sbjct: 256 KKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLK---------ERFTPNMMTYTVLLN 306
Query: 186 NATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKA--LINEMKTVGLSP 243
V N ++I + P +N +L+ + A L + MK+ G P
Sbjct: 307 GWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCP 366
Query: 244 NQITWSILI-DICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTL 302
N +++I+I D C + ++E AIE M D+G++PD YT I K L
Sbjct: 367 NVRSYTIMIRDFCKQS-SMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYEL 425
Query: 303 YEEMKSCEIHPNWVTYNTLLK 323
+EM+ P+ TYN L+K
Sbjct: 426 LKEMQEKGHPPDGKTYNALIK 446
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 61/325 (18%), Positives = 128/325 (39%), Gaps = 25/325 (7%)
Query: 5 SRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKL 64
+++ + I+++M+ K + + N LL + A AQ ++ +LK R
Sbjct: 242 AKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKE-----RFTP 296
Query: 65 DVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLF 124
++ TY+ ++ + + A ++ +DM G+ + VA + ++ + AI+LF
Sbjct: 297 NMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLF 356
Query: 125 EEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFG------EGYNSN 178
M G PN + + I++ + + A +F + + G+ +
Sbjct: 357 HVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQ 416
Query: 179 LKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYY--HAKALINEM 236
K +++ ++L + P TYN L+K + H + N+M
Sbjct: 417 KKLDTVY------------ELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKM 464
Query: 237 KTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNF 296
+ P+ T+++++ N E + M GI PD +YT I+ +
Sbjct: 465 IQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKS 524
Query: 297 KQALTLYEEMKSCEIHPNWVTYNTL 321
++A EEM + + YN
Sbjct: 525 REACRYLEEMLDKGMKTPLIDYNKF 549
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 73/335 (21%), Positives = 142/335 (42%), Gaps = 51/335 (15%)
Query: 17 IMQNLGLKP--DMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIK 74
+++ +G K M ++ I +KA A A +++ +K + K+ V T + ++
Sbjct: 216 VLEEMGTKGLLTMETFTIAMKAFAAAKERKKAVGIFELMKKY----KFKIGVETINCLLD 271
Query: 75 VFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINA-CAHAGLVEQAIQLFEEMLLAGCE 133
AKL + A +V D N + ++ L+N C L+E A +++ +M+ G +
Sbjct: 272 SLGRAKLGKEA-QVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAA-RIWNDMIDHGLK 329
Query: 134 PNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNG 193
P+ N++L + + + A + FH K +G N++ +I
Sbjct: 330 PDIVAHNVMLEGLLRSMKKSDAIKLFHVMKS--------KGPCPNVRSYTI--------- 372
Query: 194 FSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKALINEMKTVGLSPNQITWSILID 253
I F ++ S+ T + +Y+ ++M GL P+ ++ LI
Sbjct: 373 ----MIRDFCKQ-------SSMETAI-----EYF------DDMVDSGLQPDAAVYTCLIT 410
Query: 254 ICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHP 313
G + ++ E+LK M + G PD Y IK+ K + +Y +M EI P
Sbjct: 411 GFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEP 470
Query: 314 NWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAG 348
+ T+N ++K+ Y + A++ +M K G
Sbjct: 471 SIHTFNMIMKS---YFVARNYEMGRAVWDEMIKKG 502
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/308 (21%), Positives = 121/308 (39%), Gaps = 51/308 (16%)
Query: 19 QNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFAD 78
+ G D +YN ++ + + + M L+ + + G L ++ FT + +K FA
Sbjct: 186 ERQGFAHDSRTYNSMM---SILAKTRQFETMVSVLEEMGTKGLLTMETFTIA--MKAFAA 240
Query: 79 AKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQC 138
AK + A+ + M+ + + L+++ A L ++A LF++ L PN
Sbjct: 241 AKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDK-LKERFTPNMMT 299
Query: 139 FNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQ 198
+ ++L+ W + L +N + G
Sbjct: 300 YTVLLNG----------------WCRVRNLIEAARIWNDMIDHG---------------- 327
Query: 199 ILSFTERFPFTPTTSTYNTLLKACGSDYYHAKA--LINEMKTVGLSPNQITWSILI-DIC 255
P +N +L+ + A L + MK+ G PN +++I+I D C
Sbjct: 328 ---------LKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFC 378
Query: 256 GGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNW 315
+ ++E AIE M D+G++PD YT I K L +EM+ P+
Sbjct: 379 KQS-SMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDG 437
Query: 316 VTYNTLLK 323
TYN L+K
Sbjct: 438 KTYNALIK 445
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 61/325 (18%), Positives = 128/325 (39%), Gaps = 25/325 (7%)
Query: 5 SRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKL 64
+++ + I+++M+ K + + N LL + A AQ ++ +LK R
Sbjct: 241 AKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKE-----RFTP 295
Query: 65 DVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLF 124
++ TY+ ++ + + A ++ +DM G+ + VA + ++ + AI+LF
Sbjct: 296 NMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLF 355
Query: 125 EEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFG------EGYNSN 178
M G PN + + I++ + + A +F + + G+ +
Sbjct: 356 HVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQ 415
Query: 179 LKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYY--HAKALINEM 236
K +++ ++L + P TYN L+K + H + N+M
Sbjct: 416 KKLDTVY------------ELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKM 463
Query: 237 KTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNF 296
+ P+ T+++++ N E + M GI PD +YT I+ +
Sbjct: 464 IQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKS 523
Query: 297 KQALTLYEEMKSCEIHPNWVTYNTL 321
++A EEM + + YN
Sbjct: 524 REACRYLEEMLDKGMKTPLIDYNKF 548
>AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:568135-569865 FORWARD
LENGTH=576
Length = 576
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 76/147 (51%), Gaps = 5/147 (3%)
Query: 18 MQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFA 77
M + G P +N+++ AC G +D A+++ LK +ES G LK DV+TY+ II +A
Sbjct: 398 MISKGPAPGNAVFNLVVHACSKTGDLDEAKEV---LKLMESRG-LKPDVYTYTVIISGYA 453
Query: 78 DAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQ 137
+ A ++ + + L+ V + +LI ++A++L EM G +PN
Sbjct: 454 KGGMMDEAQEILAEAKKKHKKLSPVTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNAD 513
Query: 138 CFNIILHA-CVEACQYDRAFRFFHSWK 163
+N ++ + C++A +++A F K
Sbjct: 514 EYNKLIQSFCLKALDWEKAEVLFEEMK 540
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 127/305 (41%), Gaps = 16/305 (5%)
Query: 48 DMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSL 107
D+ KE+ ES G L L++ + +I +F + A V G N +
Sbjct: 215 DLVKEIGEKESCGVLNLEIL--NELIALFGKLGKSKAAFDVFSKTEEFGFTPNAKTYYLT 272
Query: 108 INACAHAGLVEQAIQLFEEMLLAGC-EPNTQCFNIILHACVEACQYDRAFRFFHSWKGNK 166
+ A ++ A + E+ML +G Q NII C E + + A+ + K +
Sbjct: 273 LEALCKRSFMDWACSVCEKMLKSGVLSEGEQMGNIITWFCKEG-KAEEAYSVYELAKTKE 331
Query: 167 MLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFT---ERFPFTPTTSTYNTLLKACG 223
S + + L N T+ F+ + + R P + ++L +
Sbjct: 332 K--SLPPRFVATLITALCKNDGTIT--FAQEMLGDLSGEARRRGIKPFSDVIHSLCRM-- 385
Query: 224 SDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAY 283
+ AKAL+ +M + G +P +++++ C T +++ A E+LK M G+KPDV Y
Sbjct: 386 RNVKDAKALLLDMISKGPAPGNAVFNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTY 445
Query: 284 TTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQD 343
T I + +A + E K + VTY+ L++ Y + E + L + +
Sbjct: 446 TVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALIRG---YCKIEEYDEALKLLNE 502
Query: 344 MQKAG 348
M + G
Sbjct: 503 MDRFG 507
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 65/130 (50%), Gaps = 5/130 (3%)
Query: 7 DLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDV 66
DL + ++M++ GLKPD+ +Y +++ G +D AQ++ E K KL
Sbjct: 422 DLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHK----KLSP 477
Query: 67 FTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINA-CAHAGLVEQAIQLFE 125
TY +I+ + + + ALK+ ++M GV N ++ LI + C A E+A LFE
Sbjct: 478 VTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQSFCLKALDWEKAEVLFE 537
Query: 126 EMLLAGCEPN 135
EM G N
Sbjct: 538 EMKQKGLHLN 547
>AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 |
chr1:22865326-22866552 REVERSE LENGTH=408
Length = 408
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 128/278 (46%), Gaps = 26/278 (9%)
Query: 56 LESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAG 115
+E+ LK + F I+ ++A A + +L+V D+ ++ + ++L+ AC A
Sbjct: 107 IENRPDLKSERFAAHAIV-LYAQANMLDHSLRVFRDLEKFEISRTVKSLNALLFACLVAK 165
Query: 116 LVEQAIQLFEEML-LAGCEPNTQCFNIILHACVEACQYDRAFRFFHSW--KGNKM-LGSF 171
++A +++ EM + G EP+ + +N ++ E+ ++ KG K SF
Sbjct: 166 DYKEAKRVYIEMPKMYGIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSF 225
Query: 172 G---EGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKAC--GSDY 226
G G+ + K + ++L+ + STYN +++
Sbjct: 226 GLMISGFYAEDKSDEV------------GKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKS 273
Query: 227 YHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTA 286
AKAL++ M + G+ PN +T+S LI ++ E A ++ K M + G KPD Y T
Sbjct: 274 KEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPDSECYFTL 333
Query: 287 IKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKA 324
I + +F+ AL+L +E + NWV +++K+
Sbjct: 334 IYYLCKGGDFETALSLCKE----SMEKNWVPSFSIMKS 367
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 80/176 (45%), Gaps = 35/176 (19%)
Query: 5 SRDLTYTLNIYQIMQNL-GLKPDMTSYNILLKACC------------------------- 38
++D +Y M + G++PD+ +YN ++K C
Sbjct: 164 AKDYKEAKRVYIEMPKMYGIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSS 223
Query: 39 -----VAG--RVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHD 91
++G D + ++ K L ++ G + + V TY+ I+ K + A +
Sbjct: 224 SFGLMISGFYAEDKSDEVGKVLAMMKDRG-VNIGVSTYNIRIQSLCKRKKSKEAKALLDG 282
Query: 92 MRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQC-FNIILHAC 146
M SAG+ NTV +S LI+ + E+A +LF+ M+ GC+P+++C F +I + C
Sbjct: 283 MLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLC 338
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 130/305 (42%), Gaps = 45/305 (14%)
Query: 14 IYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTII 73
Y + + GL PD +++ +L AC R+ ++++ +L +G +V S+++
Sbjct: 252 FYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLI-TNGIGS---NVVVESSLL 307
Query: 74 KVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCE 133
++ + A +V + M N+V+WS+L+ G E+AI++F EM E
Sbjct: 308 DMYGKCGSVREARQVFNGMSKK----NSVSWSALLGGYCQNGEHEKAIEIFREME----E 359
Query: 134 PNTQCFNIILHACVEAC----------QYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGS 183
+ CF +L AC QY R F + + ++ +G K G
Sbjct: 360 KDLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYG-------KSGC 412
Query: 184 IHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKAL--INEMKTVGL 241
I +A+ V + S ++ T+N +L A + +A+ N+M G+
Sbjct: 413 IDSASRVYSKMSIRNMI-------------TWNAMLSALAQNGRGEEAVSFFNDMVKKGI 459
Query: 242 SPNQITWSILIDICGGTENVEGAIEILKSMGDA-GIKPDVIAYTTAIKVCVESKNFKQAL 300
P+ I++ ++ CG T V+ M + GIKP Y+ I + + F++A
Sbjct: 460 KPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAE 519
Query: 301 TLYEE 305
L E
Sbjct: 520 NLLER 524
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 116/276 (42%), Gaps = 31/276 (11%)
Query: 12 LNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGR-LKLDVFTYS 70
L IY M+ + PD ++ + +AC R++ + + H + R +K ++ S
Sbjct: 194 LFIYYDMRQNRIVPDQYTFASVFRACSALDRLE-----HGKRAHAVMIKRCIKSNIIVDS 248
Query: 71 TIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLA 130
++ ++ + +V + + N + W+SLI+ + G V + ++ FE+M
Sbjct: 249 ALVDMYFKCSSFSDGHRVFDQLSTR----NVITWTSLISGYGYHGKVSEVLKCFEKMKEE 304
Query: 131 GCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTV 190
GC PN F ++L AC D+ + F+S K + + G+ Y + + T+
Sbjct: 305 GCRPNPVTFLVVLTACNHGGLVDKGWEHFYSMKRDYGIEPEGQHYAAMV--------DTL 356
Query: 191 PNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKALINEM---KTVGLSP---- 243
+ F + P + +LL AC H + E+ K + L P
Sbjct: 357 GRAGRLQEAYEFVMKSPCKEHPPVWGSLLGAC---RIHGNVKLLELAATKFLELDPTNGG 413
Query: 244 NQITWSILIDICGGTENVEGAIEILKSMGDAGIKPD 279
N + ++ CG E A ++ + M +AG+K D
Sbjct: 414 NYVVFANGYASCGLR---EAASKVRRKMENAGVKKD 446
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 90/203 (44%), Gaps = 27/203 (13%)
Query: 25 PDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQM 84
PD T+ +LL AC G + L + ++ ++ V L+L+ + ++ ++A + +
Sbjct: 212 PDETTMVVLLSAC--GGNLSLGKLVHSQVM----VRELELNCRLGTALVDMYAKSGGLEY 265
Query: 85 ALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLL-AGCEPNTQCFNIIL 143
A V M V+ N WS++I A G E+A+QLF +M+ + PN F +L
Sbjct: 266 ARLVFERM----VDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGVL 321
Query: 144 HACVEACQYDRAFRFFHSW----KGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQI 199
AC D +++FH K M+ +G + + G ++ A
Sbjct: 322 CACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEA------------ 369
Query: 200 LSFTERFPFTPTTSTYNTLLKAC 222
F ++ PF P + TLL AC
Sbjct: 370 YDFIKKMPFEPDAVVWRTLLSAC 392
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/314 (22%), Positives = 118/314 (37%), Gaps = 58/314 (18%)
Query: 14 IYQIMQNLGLKPDMTSYNILLKACC-----VAGRVDLAQDMYKELKHLESVGRLKLDVFT 68
+Y M+ G+KP+ ++ LLKAC AGR Q + LKH DV+
Sbjct: 100 VYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGR----QIQVEVLKH-----GFDFDVYV 150
Query: 69 YSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEML 128
+ +I ++ K A KV +M N V+W+S++ A G + + F EM+
Sbjct: 151 GNNLIHLYGTCKKTSDARKVFDEM----TERNVVSWNSIMTALVENGKLNLVFECFCEMI 206
Query: 129 LAGCEPNTQCFNIILHAC---------VEA----------CQYDRAFRFFHSWKGNKMLG 169
P+ ++L AC V + C+ A ++ G
Sbjct: 207 GKRFCPDETTMVVLLSACGGNLSLGKLVHSQVMVRELELNCRLGTALVDMYAKSGGLEYA 266
Query: 170 S--FGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLK---AC-- 222
F + N+ S GF+ + F++ + Y T L AC
Sbjct: 267 RLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGVLCACSH 326
Query: 223 ------GSDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGI 276
G Y+H I+++K P I + ++DI G + A + +K M
Sbjct: 327 TGLVDDGYKYFHEMEKIHKIK-----PMMIHYGAMVDILGRAGRLNEAYDFIKKM---PF 378
Query: 277 KPDVIAYTTAIKVC 290
+PD + + T + C
Sbjct: 379 EPDAVVWRTLLSAC 392
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 84/186 (45%), Gaps = 19/186 (10%)
Query: 100 NTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFF 159
+TV+W+S+I A A G E+A++LFE ML+ G P+ + + AC A ++ ++F
Sbjct: 479 DTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYF 538
Query: 160 HSWKG-NKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQIL----SFTERFPFTPTTST 214
K +K++ + H A V + F + +L F E+ P P T
Sbjct: 539 DMMKDVDKIIPTLS------------HYACMV-DLFGRAGLLQEAQEFIEKMPIEPDVVT 585
Query: 215 YNTLLKACGSDYYHAKALINEMKTVGLSP-NQITWSILIDICGGTENVEGAIEILKSMGD 273
+ +LL AC + + + L P N +S L ++ E A +I KSM D
Sbjct: 586 WGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKD 645
Query: 274 AGIKPD 279
+K +
Sbjct: 646 GRVKKE 651
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 79/156 (50%), Gaps = 9/156 (5%)
Query: 12 LNIYQIMQ-NLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYS 70
++++ +MQ + G+KPD +L AC G VD + +++ ++ + G +K D +
Sbjct: 290 IDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHE---YILTAG-IKWDTHIGT 345
Query: 71 TIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLA 130
I+ ++A + AL++ + +RS N W++L+ A G ++++ FEEM+
Sbjct: 346 AIVDMYAKCGYIETALEIFNGIRSK----NVFTWNALLGGLAIHGHGLESLRYFEEMVKL 401
Query: 131 GCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNK 166
G +PN F L+AC D R+FH K +
Sbjct: 402 GFKPNLVTFLAALNACCHTGLVDEGRRYFHKMKSRE 437
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 112/272 (41%), Gaps = 25/272 (9%)
Query: 11 TLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYS 70
L +Y+ M++ G+ PD + +L +C G + ++ K +ES G + +VF +
Sbjct: 241 VLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGK---LVESNGFVP-NVFVSN 296
Query: 71 TIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLA 130
I ++A A V M + V+W+++I G+ E + LF++M+
Sbjct: 297 ASISMYARCGNLAKARAVFDIMPVKSL----VSWTAMIGCYGMHGMGEIGLMLFDDMIKR 352
Query: 131 GCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNL----KQGSIHN 186
G P+ F ++L AC + D+ F + K L E Y+ + + G +
Sbjct: 353 GIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDE 412
Query: 187 ATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKALINEMKTVGLSPNQI 246
A + F E P P + + LL AC A + K + PN I
Sbjct: 413 A------------MEFIESMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVIEFEPNNI 460
Query: 247 TWSILI-DICGGTENVEGAIEILKSMGDAGIK 277
+ +L+ +I ++N EG I M + +
Sbjct: 461 GYYVLMSNIYSDSKNQEGIWRIRVMMRERAFR 492
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 50/101 (49%)
Query: 236 MKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKN 295
M VG+ PN T++IL ++ N + L+ M + G +PD++ Y T +
Sbjct: 227 MCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGR 286
Query: 296 FKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQ 336
K+A LY+ M + P+ VTY +L+K K G V E Q
Sbjct: 287 LKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQ 327
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 81/342 (23%), Positives = 150/342 (43%), Gaps = 27/342 (7%)
Query: 18 MQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFA 77
M+ G +PD+ +YN L+ + C GR+ A +YK + R+ D+ TY+++IK
Sbjct: 262 MEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYR----RRVVPDLVTYTSLIKGLC 317
Query: 78 DAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQ 137
+ A + H M G+ + +++++LI A G+++Q+ +L EML P+
Sbjct: 318 KDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRF 377
Query: 138 CFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNS 197
+I+ V + A F + K+ F + I + F+
Sbjct: 378 TCKVIVEGFVREGRLLSAVNFVVELRRLKVDIPF------EVCDFLIVSLCQEGKPFAAK 431
Query: 198 QILS-FTERFPFTPTTSTYNTLLKACGSDYYHAKALINEMKTVGLSPNQI----TWSILI 252
+L E TYN L+++ +AL+ +K + NQ+ T+ LI
Sbjct: 432 HLLDRIIEEEGHEAKPETYNNLIESLSRCDAIEEALV--LKGKLKNQNQVLDAKTYRALI 489
Query: 253 D-ICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQA---LTLYEEMKS 308
+C N E A ++ M D+ +KPD + + +F +A L+L+ M+
Sbjct: 490 GCLCRIGRNRE-AESLMAEMFDSEVKPDSFICGALVYGYCKELDFDKAERLLSLF-AMEF 547
Query: 309 CEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYV 350
P +YN+L+KA + G ++ L + + MQ+ G+V
Sbjct: 548 RIFDPE--SYNSLVKAVCETGC--GYKKALELQERMQRLGFV 585
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 73/330 (22%), Positives = 126/330 (38%), Gaps = 59/330 (17%)
Query: 20 NLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVF------------ 67
+LG +P++ +Y +LL + + LA EL L S + ++DVF
Sbjct: 106 DLGKRPNVGNYCLLLHILVSSKKFPLAMQFLCELIELTS-KKEEVDVFRVLVSATDECNW 164
Query: 68 ---TYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLF 124
+ ++K + L + +V ++ +G +++ V + L+N L+E Q++
Sbjct: 165 DPVVFDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVY 224
Query: 125 EEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSI 184
M G PNT FNI+ + C +SN ++
Sbjct: 225 SVMCRVGIHPNTYTFNILTNV---FCN------------------------DSNFREVD- 256
Query: 185 HNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKA-CGSDYY-HAKALINEMKTVGLS 242
L E F P TYNTL+ + C A L M +
Sbjct: 257 -------------DFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRRVV 303
Query: 243 PNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTL 302
P+ +T++ LI V A + M D GIKPD ++Y T I + +Q+ L
Sbjct: 304 PDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKL 363
Query: 303 YEEMKSCEIHPNWVTYNTLLKARSKYGSVL 332
EM + P+ T +++ + G +L
Sbjct: 364 LHEMLGNSVVPDRFTCKVIVEGFVREGRLL 393
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 67/143 (46%), Gaps = 2/143 (1%)
Query: 198 QILSFTERFPFTPTTSTYNTLLKA-CG-SDYYHAKALINEMKTVGLSPNQITWSILIDIC 255
Q+ S R P T T+N L C S++ + +M+ G P+ +T++ L+
Sbjct: 222 QVYSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSY 281
Query: 256 GGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNW 315
++ A + K M + PD++ YT+ IK + ++A + M I P+
Sbjct: 282 CRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDC 341
Query: 316 VTYNTLLKARSKYGSVLEVQQCL 338
++YNTL+ A K G + + ++ L
Sbjct: 342 MSYNTLIYAYCKEGMMQQSKKLL 364
>AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8034036-8035292 REVERSE
LENGTH=418
Length = 418
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 75/143 (52%), Gaps = 3/143 (2%)
Query: 10 YTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTY 69
+ + +++ M LG + S+N LL AC + + ++ E + + D +Y
Sbjct: 120 HAMKMFEEMDKLGTPRTVVSFNALLAACLHSDLFERVPQLFDEFP--QRYNNITPDKISY 177
Query: 70 STIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLL 129
+IK + D+ + A+++ DM GV + +A+++++ + GLV++A L+ EM+
Sbjct: 178 GMLIKSYCDSGKPEKAMEIMRDMEVKGVEVTIIAFTTILGSLYKNGLVDEAESLWIEMVN 237
Query: 130 AGCEPNTQCFNI-ILHACVEACQ 151
GC+ + +N+ +++A E+ +
Sbjct: 238 KGCDLDNTVYNVRLMNAAKESPE 260
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 98/230 (42%), Gaps = 31/230 (13%)
Query: 105 SSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKG 164
S+LI + A + + A+++FEEM G FN +L AC+ + ++R + F
Sbjct: 106 STLIRSYGRASMFDHAMKMFEEMDKLGTPRTVVSFNALLAACLHSDLFERVPQLFD---- 161
Query: 165 NKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNS-------QILSFTERFPFTPTTSTYNT 217
F + YN N+ I + + +S +I+ E T + T
Sbjct: 162 -----EFPQRYN-NITPDKISYGMLI-KSYCDSGKPEKAMEIMRDMEVKGVEVTIIAFTT 214
Query: 218 LLKACGSDYYH-----AKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMG 272
+L GS Y + A++L EM G + +++ + + E+ E E+++ M
Sbjct: 215 IL---GSLYKNGLVDEAESLWIEMVNKGCDLDNTVYNVRL-MNAAKESPERVKELMEEMS 270
Query: 273 DAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLL 322
G+KPD ++Y + +A +YE ++ PN T+ TL+
Sbjct: 271 SVGLKPDTVSYNYLMTAYCVKGMMSEAKKVYEGLE----QPNAATFRTLI 316
>AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17292479-17293717 REVERSE
LENGTH=412
Length = 412
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/264 (21%), Positives = 112/264 (42%), Gaps = 43/264 (16%)
Query: 61 RLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQA 120
++K + F YST+I+ + A ++ A++ M G + V++++L+NAC H+ ++
Sbjct: 98 KIKEEPF-YSTLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKV 156
Query: 121 IQLFEEMLLAGCE--PNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSN 178
QLF+E+ + P+ + I++ + ++ ++A +G M
Sbjct: 157 PQLFDEIPQRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGM----------- 205
Query: 179 LKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKALINEMKT 238
TT+ +FT T +S Y + A L NEM
Sbjct: 206 -------EVTTI----------AFT-----TILSSLYKK------GELEVADNLWNEMVK 237
Query: 239 VGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQ 298
G + +++ I + E+ E E+++ M G+KPD I+Y + E +
Sbjct: 238 KGCELDNAAYNVRI-MSAQKESPERVKELIEEMSSMGLKPDTISYNYLMTAYCERGMLDE 296
Query: 299 ALTLYEEMKSCEIHPNWVTYNTLL 322
A +YE ++ PN T+ TL+
Sbjct: 297 AKKVYEGLEGNNCAPNAATFRTLI 320
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 73/145 (50%), Gaps = 3/145 (2%)
Query: 8 LTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVF 67
+ + ++ M G S+N LL AC + D ++ E+ + ++ D
Sbjct: 118 FNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDEIP--QRYNKIIPDKI 175
Query: 68 TYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEM 127
+Y +IK + D+ + A+++ M+ G+ + T+A+++++++ G +E A L+ EM
Sbjct: 176 SYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEVADNLWNEM 235
Query: 128 LLAGCEPNTQCFNI-ILHACVEACQ 151
+ GCE + +N+ I+ A E+ +
Sbjct: 236 VKKGCELDNAAYNVRIMSAQKESPE 260
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 116/297 (39%), Gaps = 55/297 (18%)
Query: 62 LKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAI 121
L L+VF S++I +++ L +MALKV M + N VAW+S+I+ + L E +I
Sbjct: 507 LVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTE----NMVAWNSMISCYSRNNLPELSI 562
Query: 122 QLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQ 181
LF ML G P++ +L A S LK
Sbjct: 563 DLFNLMLSQGIFPDSVSITSVLVAISSTA--------------------------SLLKG 596
Query: 182 GSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLK---ACGSDYYHAKALINEMKT 238
S+H +T R T N L+ CG Y A+ + +M+
Sbjct: 597 KSLHG---------------YTLRLGIPSDTHLKNALIDMYVKCGFSKY-AENIFKKMQH 640
Query: 239 VGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQ 298
L ITW+++I G + A+ + M AG PD + + + I C S ++
Sbjct: 641 KSL----ITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEE 696
Query: 299 ALTLYEEMK-SCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYVRLCL 354
++E MK I PN Y ++ + G +LE ++ + LCL
Sbjct: 697 GKNIFEFMKQDYGIEPNMEHYANMVDLLGRAG-LLEEAYSFIKAMPIEADSSIWLCL 752
>AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4543265-4545256 REVERSE
LENGTH=634
Length = 634
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 78/151 (51%), Gaps = 4/151 (2%)
Query: 10 YTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTY 69
+ + Y+++ + G ++ SY++++ C AGRV ++ Y L+ ++ G L DV Y
Sbjct: 380 HLIKAYELLSSKGYFSELQSYSLMISFLCKAGRV---RESYTALQEMKKEG-LAPDVSLY 435
Query: 70 STIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLL 129
+ +I+ A++ + A K+ +M G +N ++ LI + G E++++LF++ML
Sbjct: 436 NALIEACCKAEMIRPAKKLWDEMFVEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLE 495
Query: 130 AGCEPNTQCFNIILHACVEACQYDRAFRFFH 160
G EP+ + ++ + + + A F
Sbjct: 496 RGIEPDETIYMSLIEGLCKETKIEAAMEVFR 526
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 121/286 (42%), Gaps = 18/286 (6%)
Query: 14 IYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTII 73
I + ++N+ KPD +Y ++ +A V G + Q + K+ + L R Y I
Sbjct: 245 ILEELRNIDCKPDFMAYRVIAEAFVVTGNLYERQVVLKKKRKLGVAPRSS----DYRAFI 300
Query: 74 KVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCE 133
AK A +V + S ++ +LI + + A + A++ M+ G
Sbjct: 301 LDLISAKRLTEAKEVAEVIVSGKFPMDNDILDALIGSVS-AVDPDSAVEFLVYMVSTGKL 359
Query: 134 PNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNG 193
P + + + C++D++ H K ++L S +GY S L+ S+ + G
Sbjct: 360 PAIRTLSKL---SKNLCRHDKSD---HLIKAYELLSS--KGYFSELQSYSLMISFLCKAG 411
Query: 194 FSNSQILSFTE--RFPFTPTTSTYNTLLKAC--GSDYYHAKALINEMKTVGLSPNQITWS 249
+ E + P S YN L++AC AK L +EM G N T++
Sbjct: 412 RVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKMNLTTYN 471
Query: 250 ILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIK-VCVESK 294
+LI E ++ + M + GI+PD Y + I+ +C E+K
Sbjct: 472 VLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKETK 517
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 78/167 (46%), Gaps = 9/167 (5%)
Query: 2 NVNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGR 61
+V++ D + M + G P + + + L K C R D + + K + L S G
Sbjct: 337 SVSAVDPDSAVEFLVYMVSTGKLPAIRTLSKLSKNLC---RHDKSDHLIKAYELLSSKGY 393
Query: 62 LKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAI 121
++ +YS +I A + + +M+ G+ + +++LI AC A ++ A
Sbjct: 394 FS-ELQSYSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAK 452
Query: 122 QLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKML 168
+L++EM + GC+ N +N+++ E + + + R F +KML
Sbjct: 453 KLWDEMFVEGCKMNLTTYNVLIRKLSEEGEAEESLRLF-----DKML 494
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 59/111 (53%), Gaps = 4/111 (3%)
Query: 16 QIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKV 75
Q M+ GL PD++ YN L++ACC A + A+ ++ E+ V K+++ TY+ +I+
Sbjct: 421 QEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEM----FVEGCKMNLTTYNVLIRK 476
Query: 76 FADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEE 126
++ + +L++ M G+ + + SLI +E A+++F +
Sbjct: 477 LSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKETKIEAAMEVFRK 527
>AT3G60040.1 | Symbols: | F-box family protein |
chr3:22175937-22179728 REVERSE LENGTH=838
Length = 838
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 66/120 (55%), Gaps = 2/120 (1%)
Query: 233 INEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVE 292
+N MK VG+ P+ + ++ LID + ++ A E+ + M G P+V Y + I+
Sbjct: 712 LNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCM 771
Query: 293 SKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAGYVRL 352
+ F++A L +EM+S +PN+V Y+TL+ K G + E ++ I + ++K YV L
Sbjct: 772 AGEFREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARK--VIKEMVKKGHYVHL 829
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 65/114 (57%), Gaps = 4/114 (3%)
Query: 18 MQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFA 77
M+ +G+ P + Y L+ V+G +D A++M++E+ G+L +VFTY+++I+
Sbjct: 715 MKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMT---VKGQLP-NVFTYNSMIRGLC 770
Query: 78 DAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAG 131
A ++ A + +M S G N N V +S+L+ AG + +A ++ +EM+ G
Sbjct: 771 MAGEFREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKEMVKKG 824
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 117/268 (43%), Gaps = 17/268 (6%)
Query: 11 TLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYS 70
+L I++ MQ+ G+ PD + +L AC G +++ + +K ++K DV +
Sbjct: 352 SLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGE----WIKTYIDKNKIKNDVVVGN 407
Query: 71 TIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLA 130
+I ++ + A KV HDM + W++++ A+ G ++AI++F +M
Sbjct: 408 ALIDMYFKCGCSEKAQKVFHDMDQR----DKFTWTAMVVGLANNGQGQEAIKVFFQMQDM 463
Query: 131 GCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTV 190
+P+ + +L AC + D+A +FF + + + Y + + A V
Sbjct: 464 SIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDM--LGRAGLV 521
Query: 191 PNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKALINEMKTVGLSP-NQITWS 249
+ +IL + P P + + LL A A + K + L P N ++
Sbjct: 522 KEAY---EIL---RKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILELEPDNGAVYA 575
Query: 250 ILIDICGGTENVEGAIEILKSMGDAGIK 277
+L +I G + + E+ + + D IK
Sbjct: 576 LLCNIYAGCKRWKDLREVRRKIVDVAIK 603
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 79/375 (21%), Positives = 149/375 (39%), Gaps = 67/375 (17%)
Query: 21 LGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAK 80
GL ++ N L+K + G +D+A+ ++ R K DVF+++ +I + K
Sbjct: 164 FGLGSNLYVQNALVKMYSLCGLMDMARGVFDR--------RCKEDVFSWNLMISGYNRMK 215
Query: 81 LWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFN 140
++ ++++ +M V+ +V +++AC+ + ++ E + EP+ + N
Sbjct: 216 EYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLEN 275
Query: 141 IILHACVEACQYDRAFRFFHSWKGNKMLG--SFGEGY--NSNLKQGSIH----------N 186
+++A + D A R F S K ++ S +GY NLK + +
Sbjct: 276 ALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRIS 335
Query: 187 ATTVPNGFSNS-------QILSFTERFPFTPTTSTYNTLLKACG---------------- 223
T + +G+ + +I + P T ++L AC
Sbjct: 336 WTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYID 395
Query: 224 -----SDYYHAKALINEMKTVGLSP------------NQITWSILIDICGGTENVEG--A 264
+D ALI+ G S ++ TW+ + + G N +G A
Sbjct: 396 KNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAM--VVGLANNGQGQEA 453
Query: 265 IEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKS-CEIHPNWVTYNTLLK 323
I++ M D I+PD I Y + C S QA + +M+S I P+ V Y ++
Sbjct: 454 IKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVD 513
Query: 324 ARSKYGSVLEVQQCL 338
+ G V E + L
Sbjct: 514 MLGRAGLVKEAYEIL 528
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 108/262 (41%), Gaps = 17/262 (6%)
Query: 11 TLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYS 70
TL + M L L D S + ++ AC ++L + ++ ++ L D S
Sbjct: 434 TLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFAR----ATIVGLDSDQVVSS 489
Query: 71 TIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLA 130
++I ++ + +V M V + V W+S+I+ A G +AI LF++M +A
Sbjct: 490 SLIDLYCKCGFVEHGRRVFDTM----VKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVA 545
Query: 131 GCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTV 190
G P F ++L AC + + F S K + G+ + + S
Sbjct: 546 GIRPTQITFMVVLTACNYCGLVEEGRKLFESMKVD-------HGFVPDKEHFSCMVDLLA 598
Query: 191 PNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKALINEMKTVGLSP-NQITWS 249
G+ I + E PF S ++++L+ C ++ Y A K + L P N + +
Sbjct: 599 RAGYVEEAI-NLVEEMPFDVDGSMWSSILRGCVANGYKAMGKKAAEKIIELEPENSVAYV 657
Query: 250 ILIDICGGTENVEGAIEILKSM 271
L I + + E + + K M
Sbjct: 658 QLSAIFATSGDWESSALVRKLM 679
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/332 (21%), Positives = 144/332 (43%), Gaps = 40/332 (12%)
Query: 12 LNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYST 71
L +++ M ++PD ++ ++ AC +G ++L + ++ + LK+ +
Sbjct: 251 LELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKI----VNA 306
Query: 72 IIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAG 131
+I +++ + A + + V ++W++LI H L ++A+ LF+EML +G
Sbjct: 307 LIDLYSKCGELETACGLFERLPYKDV----ISWNTLIGGYTHMNLYKEALLLFQEMLRSG 362
Query: 132 CEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLG-SFGEGYNSNL-----KQGSIH 185
PN IL AC D R+ H + ++ G + ++L K G I
Sbjct: 363 ETPNDVTMLSILPACAHLGAIDIG-RWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIE 421
Query: 186 NATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKA-----LINEMKTVG 240
A V N + + S++N ++ H +A L + M+ +G
Sbjct: 422 AAHQVFNSILHKSL-------------SSWNAMIFGFA---MHGRADASFDLFSRMRKIG 465
Query: 241 LSPNQITWSILIDICGGTENVEGAIEILKSMG-DAGIKPDVIAYTTAIKVCVESKNFKQA 299
+ P+ IT+ L+ C + ++ I ++M D + P + Y I + S FK+A
Sbjct: 466 IQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEA 525
Query: 300 LTLYEEMKSCEIHPNWVTYNTLLKARSKYGSV 331
+ M+ P+ V + +LLKA +G+V
Sbjct: 526 EEMINMMEME---PDGVIWCSLLKACKMHGNV 554
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 122/296 (41%), Gaps = 55/296 (18%)
Query: 5 SRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQ----------------- 47
S D L +Y M +LGL P+ ++ +LK+C + Q
Sbjct: 112 SSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYV 171
Query: 48 -----DMYKELKHLESVGRL-----KLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGV 97
MY + LE ++ DV +Y+ +IK +A + A K+ ++ V
Sbjct: 172 HTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDV 231
Query: 98 NLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFR 157
V+W+++I+ A G ++A++LF++M+ P+ ++ AC ++ + R
Sbjct: 232 ----VSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELG-R 286
Query: 158 FFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQIL----SFTERFPFTPTTS 213
H W + G+ SNLK I NA + +S L ER P+ S
Sbjct: 287 QVHLWIDD-------HGFGSNLK---IVNALI--DLYSKCGELETACGLFERLPYKDVIS 334
Query: 214 TYNTLLKACG--SDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEI 267
+NTL+ + Y A L EM G +PN +T ++ C GAI+I
Sbjct: 335 -WNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHL----GAIDI 385
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/312 (21%), Positives = 129/312 (41%), Gaps = 60/312 (19%)
Query: 16 QIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKV 75
+I +G + D+ S+ ++ C G V+ A++M+ E+ H ++FT+S +I
Sbjct: 173 RIFGQMGFR-DVVSWTSMVAGYCKCGMVENAREMFDEMPHR--------NLFTWSIMING 223
Query: 76 FADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPN 135
+A ++ A+ + M+ GV N S+I++CAH G +E + +E ++ +
Sbjct: 224 YAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGALEFGERAYEYVV-----KS 278
Query: 136 TQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFS 195
N+IL G ++ F + G I A V G
Sbjct: 279 HMTVNLIL--------------------GTALVDMF-------WRCGDIEKAIHVFEGLP 311
Query: 196 NSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKAL--INEMKTVGLSPNQITWSILID 253
+ LS +++++K + KA+ ++M ++G P +T++ ++
Sbjct: 312 ETDSLS-------------WSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLS 358
Query: 254 ICGGTENVEGAIEILKSM-GDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIH 312
C VE +EI ++M D GI+P + Y + + + +A +M +
Sbjct: 359 ACSHGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKM---HVK 415
Query: 313 PNWVTYNTLLKA 324
PN LL A
Sbjct: 416 PNAPILGALLGA 427
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/328 (18%), Positives = 129/328 (39%), Gaps = 58/328 (17%)
Query: 12 LNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYST 71
+ +++ +QNLG++ D S ++ +C G V L + ++ + L L + ++
Sbjct: 418 IELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTS----LDLTISVVNS 473
Query: 72 IIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAG 131
+I ++ +A ++ + + N + W+++I + H E+AI LF+ M+
Sbjct: 474 LIDLYGKMGDLTVAWRMFCE-----ADTNVITWNAMIASYVHCEQSEKAIALFDRMVSEN 528
Query: 132 CEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVP 191
+P++ +L ACV +R + H +
Sbjct: 529 FKPSSITLVTLLMACVNTGSLERG-QMIHRY----------------------------- 558
Query: 192 NGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKALINEMKTVGLSPNQ---ITW 248
T T N L A D Y + + + + + NQ + W
Sbjct: 559 ----------------ITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCW 602
Query: 249 SILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKS 308
+++I G +VE AI + M ++ +KP + + C + +Q L+ +M
Sbjct: 603 NVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLFLKMHQ 662
Query: 309 CEIHPNWVTYNTLLKARSKYGSVLEVQQ 336
++ PN Y+ L+ S+ G++ E +
Sbjct: 663 YDVKPNLKHYSCLVDLLSRSGNLEEAES 690
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 76/339 (22%), Positives = 131/339 (38%), Gaps = 57/339 (16%)
Query: 2 NVNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGR 61
N + RD L +Y M ++P S ++ LKAC VDL H + V R
Sbjct: 214 NGSPRD---ALIVYVDMLCSFIEPGNFSISVALKAC-----VDLKDLRVGRGIHAQIVKR 265
Query: 62 L-KLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQA 120
K+D Y+ ++K++ ++ L+ A KV M N V W+SLI+ + V +
Sbjct: 266 KEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSER----NVVTWNSLISVLSKKVRVHEM 321
Query: 121 IQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLK 180
LF +M + IL AC L
Sbjct: 322 FNLFRKMQEEMIGFSWATLTTILPACSRVAAL--------------------------LT 355
Query: 181 QGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKALINEMKTVG 240
IH +QIL E+ P P ++ + CG Y + V
Sbjct: 356 GKEIH-----------AQILKSKEK-PDVPLLNSLMDMYGKCGEVEYSRRVF-----DVM 398
Query: 241 LSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQAL 300
L+ + +W+I+++ N+E I + + M ++G+ PD I + + C ++ + L
Sbjct: 399 LTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGL 458
Query: 301 TLYEEMKS-CEIHPNWVTYNTLLKARSKYGSVLEVQQCL 338
+L+E MK+ + P Y L+ + G + E + +
Sbjct: 459 SLFERMKTEFRVSPALEHYACLVDILGRAGKIKEAVKVI 497
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 81/368 (22%), Positives = 140/368 (38%), Gaps = 33/368 (8%)
Query: 4 NSRDLTYTLNIYQIMQNL--GLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGR 61
NS D + L+ ++ +L G K T+Y+ + + C G + D+ +K
Sbjct: 67 NSIDPSKKLDFFRWCYSLRPGYKHSATAYSQIFRTVCRTGLLGEVPDLLGSMKE----DG 122
Query: 62 LKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAI 121
+ LD ++ + ++ AL V M G LN + S++ A + A+
Sbjct: 123 VNLDQTMAKILLDSLIRSGKFESALGVLDYMEELGDCLNPSVYDSVLIALVKKHELRLAL 182
Query: 122 QLFEEMLLAGCE---------------PNTQCFNIILHACVEACQYDRAFRFFHSWKGNK 166
+ ++L A P T N +L A R F KG K
Sbjct: 183 SILFKLLEASDNHSDDDTGRVIIVSYLPGTVAVNELLVGLRRADMRSEFKRVFEKLKGMK 242
Query: 167 MLGSFGEGYNSNLKQ----GSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKAC 222
YN + G + A ++ F + S F P TYN+L+
Sbjct: 243 RFKFDTWSYNICIHGFGCWGDLDAALSL---FKEMKERSSVYGSSFGPDICTYNSLIHVL 299
Query: 223 GSDYYHAKALI--NEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDV 280
ALI +E+K G P+ T+ ILI C + ++ A+ I M G PD
Sbjct: 300 CLFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDT 359
Query: 281 IAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAI 340
I Y + ++++ +A L+E+M + + TYN L+ + G + +
Sbjct: 360 IVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNG---RAEAGFTL 416
Query: 341 YQDMQKAG 348
+ D++K G
Sbjct: 417 FCDLKKKG 424
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 60/110 (54%), Gaps = 4/110 (3%)
Query: 26 DMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMA 85
D+ +YN++++ GR DLA + L L G LD+ Y+T+I A A
Sbjct: 664 DIATYNVIIQGLGKMGRADLASAV---LDRLTKQGGY-LDIVMYNTLINALGKATRLDEA 719
Query: 86 LKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPN 135
++ M+S G+N + V+++++I + AG +++A + + ML AGC PN
Sbjct: 720 TQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAMLDAGCLPN 769
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 68/135 (50%), Gaps = 2/135 (1%)
Query: 211 TTSTYNTLLKACGSDYYH--AKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEIL 268
T+ TYN+++ + Y A+ ++++M + + T++++I G + A +L
Sbjct: 629 TSYTYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVL 688
Query: 269 KSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKY 328
+ G D++ Y T I ++ +A L++ MKS I+P+ V+YNT+++ SK
Sbjct: 689 DRLTKQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKA 748
Query: 329 GSVLEVQQCLAIYQD 343
G + E + L D
Sbjct: 749 GKLKEAYKYLKAMLD 763
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 75/157 (47%), Gaps = 7/157 (4%)
Query: 7 DLTYTLNIYQIMQNLGLKPDMTSY--NILLKACCVAGRVDLAQDMYKELKHLESVGRLKL 64
DL+ +++I +G+ D+TSY N ++ + G A+ + ++ E+
Sbjct: 609 DLSLACKLFEIFNGMGVT-DLTSYTYNSMMSSFVKKGYFQTARGVLDQM--FENF--CAA 663
Query: 65 DVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLF 124
D+ TY+ II+ +A V + G L+ V +++LINA A +++A QLF
Sbjct: 664 DIATYNVIIQGLGKMGRADLASAVLDRLTKQGGYLDIVMYNTLINALGKATRLDEATQLF 723
Query: 125 EEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHS 161
+ M G P+ +N ++ +A + A+++ +
Sbjct: 724 DHMKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKA 760
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 70/153 (45%), Gaps = 8/153 (5%)
Query: 11 TLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYS 70
T +++ M ++P+ + +L AC G VDL K+L L +VF S
Sbjct: 505 TFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLG----KQLHGFSIRQYLDQNVFVAS 560
Query: 71 TIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLA 130
++ +++ A A+K DM S N+V ++++I G+ E+AI LF M +
Sbjct: 561 ALVDMYSKAG----AIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQES 616
Query: 131 GCEPNTQCFNIILHACVEACQYDRAFRFFHSWK 163
G +P+ F +L AC + D + F +
Sbjct: 617 GIKPDAITFVAVLSACSYSGLIDEGLKIFEEMR 649
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 90/184 (48%), Gaps = 14/184 (7%)
Query: 3 VNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRL 62
+ S DL L+ + I Q L + S L+ AG + A+DM+ + K SV
Sbjct: 534 IGSVDLGKQLHGFSIRQYLDQNVFVAS--ALVDMYSKAGAIKYAEDMFSQTKERNSV--- 588
Query: 63 KLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQ 122
TY+T+I + + + A+ + M+ +G+ + + + ++++AC+++GL+++ ++
Sbjct: 589 -----TYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLK 643
Query: 123 LFEEML-LAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQ 181
+FEEM + +P+++ + I + + A+ F KG G+ E + S L
Sbjct: 644 IFEEMREVYNIQPSSEHYCCITDMLGRVGRVNEAYEFV---KGLGEEGNIAELWGSLLGS 700
Query: 182 GSIH 185
+H
Sbjct: 701 CKLH 704
>AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:493683-495158 FORWARD
LENGTH=491
Length = 491
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 58/119 (48%), Gaps = 2/119 (1%)
Query: 210 PTTSTYNTLLKACGSDYYHAKA--LINEMKTVGLSPNQITWSILIDICGGTENVEGAIEI 267
P TYN+L+ D KA LI++M+ +P+ IT++ +I G + A E+
Sbjct: 244 PDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPDKAREV 303
Query: 268 LKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARS 326
LK M + G PDV AY AI+ ++ A L +EM + PN TYN + S
Sbjct: 304 LKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNLFFRVLS 362
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 67/151 (44%), Gaps = 4/151 (2%)
Query: 18 MQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFA 77
M+ GLKPD+ +YN L+ C ++ A + +++ E DV TY+T+I
Sbjct: 237 MKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETP----DVITYTTVIGGLG 292
Query: 78 DAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQ 137
A +V +M+ G + A+++ I A + A +L +EM+ G PN
Sbjct: 293 LIGQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNAT 352
Query: 138 CFNIILHACVEACQYDRAFRFFHSWKGNKML 168
+N+ A R++ + GN+ L
Sbjct: 353 TYNLFFRVLSLANDLGRSWELYVRMLGNECL 383
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 139/323 (43%), Gaps = 33/323 (10%)
Query: 16 QIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMY-KELKHLESVGRLKLDVFTYSTIIK 74
++M+ + PD S+ ++KA + M+ + LKH L+ +F +T+I
Sbjct: 95 EMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQMHCQALKH-----GLESHLFVGTTLIG 149
Query: 75 VFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEP 134
++ + A KV +M N VAW+++I AC V A ++F++ML+
Sbjct: 150 MYGGCGCVEFARKVFDEMHQP----NLVAWNAVITACFRGNDVAGAREIFDKMLVR---- 201
Query: 135 NTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGF 194
N +N++L ++A + + A R F + S + G H NG
Sbjct: 202 NHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSW------STMIVGIAH------NGS 249
Query: 195 SNSQILSFTE--RFPFTPTTSTYNTLLKAC--GSDYYHAKALINEMKTVGLSPNQITWSI 250
N L F E R +P + +L AC + K L ++ G S +
Sbjct: 250 FNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNA 309
Query: 251 LIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCE 310
LID+ NV A + + M + K ++++T+ I ++A+ L+ EM +
Sbjct: 310 LIDMYSRCGNVPMARLVFEGMQE---KRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYG 366
Query: 311 IHPNWVTYNTLLKARSKYGSVLE 333
+ P+ +++ +LL A S G + E
Sbjct: 367 VTPDGISFISLLHACSHAGLIEE 389
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 87/214 (40%), Gaps = 23/214 (10%)
Query: 15 YQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIK 74
++ +Q G+ P+ S +L AC +G + + ++ +E G + V + +I
Sbjct: 257 FRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHG---FVEKAGYSWI-VSVNNALID 312
Query: 75 VFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEP 134
+++ MA V M+ V+W+S+I A G E+A++LF EM G P
Sbjct: 313 MYSRCGNVPMARLVFEGMQEKRC---IVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTP 369
Query: 135 NTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNL----KQGSIHNATTV 190
+ F +LHAC A + +F K + E Y + + G + A
Sbjct: 370 DGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKA--- 426
Query: 191 PNGFSNSQILSFTERFPFTPTTSTYNTLLKACGS 224
F + P PT + TLL AC S
Sbjct: 427 ---------YDFICQMPIPPTAIVWRTLLGACSS 451
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 73/162 (45%), Gaps = 24/162 (14%)
Query: 7 DLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKEL--KHLESVGRLKL 64
DL + ++++M +PD + +L C + L ++++ + K ES+
Sbjct: 499 DLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFESIP---- 554
Query: 65 DVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVA------WSSLINACAHAGLVE 118
F + IIK++ D+RSA + + VA W+++I A L
Sbjct: 555 --FVSARIIKMYGKCG----------DLRSANFSFDAVAVKGSLTWTAIIEAYGCNELFR 602
Query: 119 QAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFH 160
AI FE+M+ G PNT F +L C +A D A+RFF+
Sbjct: 603 DAINCFEQMVSRGFTPNTFTFTAVLSICSQAGFVDEAYRFFN 644
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/370 (20%), Positives = 161/370 (43%), Gaps = 57/370 (15%)
Query: 3 VNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRL 62
+ S+ L+ ++Q M + ++ S+N ++ +GR+D A +++ E+
Sbjct: 120 LRSKQLSIAEMLFQEMP----ERNVVSWNTMIDGYAQSGRIDKALELFDEMP-------- 167
Query: 63 KLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQ 122
+ ++ ++++++K A+ + M V V+W+++++ A G V++A +
Sbjct: 168 ERNIVSWNSMVKALVQRGRIDEAMNLFERMPRRDV----VSWTAMVDGLAKNGKVDEARR 223
Query: 123 LFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFH--------SWKGNKMLGSFGEG 174
LF+ M E N +N ++ + + D A + F SW N M+ F
Sbjct: 224 LFDCM----PERNIISWNAMITGYAQNNRIDEADQLFQVMPERDFASW--NTMITGFIRN 277
Query: 175 YNSN--------LKQGSIHNATTVPNGF----SNSQILSFTERF----PFTPTTSTYNTL 218
N + + ++ + TT+ G+ N + L+ + P TY ++
Sbjct: 278 REMNKACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSI 337
Query: 219 LKACG--SDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGI 276
L AC + + + + N+I S L+++ + G + + M D G+
Sbjct: 338 LSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKS----GELIAARKMFDNGL 393
Query: 277 --KPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEV 334
+ D+I++ + I V + K+A+ +Y +M+ P+ VTY LL A S G V
Sbjct: 394 VCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGL---V 450
Query: 335 QQCLAIYQDM 344
++ + ++D+
Sbjct: 451 EKGMEFFKDL 460
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 144/312 (46%), Gaps = 38/312 (12%)
Query: 39 VAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVN 98
+ G + L DM + + + V K +V T++ ++ + +K +A + +M
Sbjct: 84 ITGYIKLG-DMREARELFDRVDSRK-NVVTWTAMVSGYLRSKQLSIAEMLFQEMPER--- 138
Query: 99 LNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRF 158
N V+W+++I+ A +G +++A++LF+EM E N +N ++ A V+ + D A
Sbjct: 139 -NVVSWNTMIDGYAQSGRIDKALELFDEM----PERNIVSWNSMVKALVQRGRIDEAMNL 193
Query: 159 FHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTL 218
F ++ S+ + K G + A + + I+S +N +
Sbjct: 194 FERMPRRDVV-SWTAMVDGLAKNGKVDEARRLFDCMPERNIIS-------------WNAM 239
Query: 219 LKACGSDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMG--DAGI 276
+ + +A +++ V + +W+ + I G N E+ K+ G D
Sbjct: 240 ITGYAQNNRIDEA--DQLFQVMPERDFASWNTM--ITGFIRNR----EMNKACGLFDRMP 291
Query: 277 KPDVIAYTTAIKVCVESKNFKQALTLYEEM-KSCEIHPNWVTYNTLLKARSKYGSVLEVQ 335
+ +VI++TT I VE+K ++AL ++ +M + + PN TY ++L A S ++E Q
Sbjct: 292 EKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQ 351
Query: 336 QCLAIYQDMQKA 347
Q I+Q + K+
Sbjct: 352 Q---IHQLISKS 360
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/286 (21%), Positives = 128/286 (44%), Gaps = 34/286 (11%)
Query: 3 VNSRDLTYTLNIY-QIMQNLGLKPDMTSYNILLKACC-VAGRVD---LAQDMYKELKHLE 57
V +++ LN++ +++++ +KP++ +Y +L AC +AG V+ + Q + K +
Sbjct: 306 VENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKN 365
Query: 58 SVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLV 117
+ L + YS ++ A K++ L + D+ ++W+S+I AH G
Sbjct: 366 EIVTSAL-LNMYSKSGELIAARKMFDNGLVCQRDL---------ISWNSMIAVYAHHGHG 415
Query: 118 EQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNS 177
++AI+++ +M G +P+ + +L AC A ++ FF ++ L E Y
Sbjct: 416 KEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLREEHYTC 475
Query: 178 NL----KQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACG--SDYYHAKA 231
+ + G + + T F N + F Y +L AC ++ AK
Sbjct: 476 LVDLCGRAGRLKDVTN----FINCDDARLSRSF--------YGAILSACNVHNEVSIAKE 523
Query: 232 LINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIK 277
++ ++ G S + T+ ++ +I E A E+ M + G+K
Sbjct: 524 VVKKVLETG-SDDAGTYVLMSNIYAANGKREEAAEMRMKMKEKGLK 568
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/324 (22%), Positives = 134/324 (41%), Gaps = 50/324 (15%)
Query: 2 NVNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGR 61
NV+S +++Y M+N + PD ++ LL + + L Q + ++ +
Sbjct: 37 NVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRTHAQIL----LFG 92
Query: 62 LKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAI 121
L D F ++++ +++ + A +V D S + AW+S++NA A AGL++ A
Sbjct: 93 LDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSK----DLPAWNSVVNAYAKAGLIDDAR 148
Query: 122 QLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQ 181
+LF+EM E N ++ +++ V +Y A F + K
Sbjct: 149 KLFDEM----PERNVISWSCLINGYVMCGKYKEALDLFREMQLPKP-------------- 190
Query: 182 GSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKALINEMKTVGL 241
+ A PN F+ S +LS R + + D YH + I
Sbjct: 191 ---NEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYI-----DKYHVEIDI-------- 234
Query: 242 SPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALT 301
+ + LID+ ++E A + ++G K DV AY+ I +
Sbjct: 235 ----VLGTALIDMYAKCGSLERAKRVFNALGS---KKDVKAYSAMICCLAMYGLTDECFQ 287
Query: 302 LYEEMKSCE-IHPNWVTYNTLLKA 324
L+ EM + + I+PN VT+ +L A
Sbjct: 288 LFSEMTTSDNINPNSVTFVGILGA 311
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 117/282 (41%), Gaps = 45/282 (15%)
Query: 103 AWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHS- 161
AW+ +I+A + A+ LFEEM+ +G PN F+ ++ +C R S
Sbjct: 91 AWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSV 150
Query: 162 ----WKGNKMLG-SFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFT------------- 203
++GN ++G S + Y+ K G A + + N+ +S+T
Sbjct: 151 IKTGFEGNSVVGSSLSDLYS---KCGQFKEACELFSSLQNADTISWTMMISSLVGARKWR 207
Query: 204 ERFPF---------TPTTSTYNTLLKAC---GSDYYHAKALINEMKTVGLSPNQITWSIL 251
E F P T+ LL A G ++ K + + + G+ N + + L
Sbjct: 208 EALQFYSEMVKAGVPPNEFTFVKLLGASSFLGLEF--GKTIHSNIIVRGIPLNVVLKTSL 265
Query: 252 IDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEI 311
+D +E A+ +L S G+ DV +T+ + V + K+A+ + EM+S +
Sbjct: 266 VDFYSQFSKMEDAVRVLNSSGE----QDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGL 321
Query: 312 HPNWVTYNTLLK----ARS-KYGSVLEVQQCLAIYQDMQKAG 348
PN TY+ +L RS +G + Q ++D G
Sbjct: 322 QPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVG 363
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 78/371 (21%), Positives = 150/371 (40%), Gaps = 57/371 (15%)
Query: 5 SRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKL 64
S++ L++++ M G P+ +++ ++++C AG D++ Y H + K
Sbjct: 102 SQEFASALSLFEEMMASGTHPNEFTFSSVVRSC--AGLRDIS---YGGRVHGSVI---KT 153
Query: 65 DVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLF 124
S + +D K ++ S+ N +T++W+ +I++ A +A+Q +
Sbjct: 154 GFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFY 213
Query: 125 EEMLLAGCEPNTQCFNIILHAC-VEACQYDRAFRFFHSWKG---NKMLGSFGEGYNSNLK 180
EM+ AG PN F +L A ++ + +G N +L + + S
Sbjct: 214 SEMVKAGVPPNEFTFVKLLGASSFLGLEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFS 273
Query: 181 QGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKALINEMKTVG 240
+ + +A V N + F +T S + L+A A EM+++G
Sbjct: 274 K--MEDAVRVLNSSGEQDV------FLWTSVVSGFVRNLRA-----KEAVGTFLEMRSLG 320
Query: 241 LSPNQITWSILIDICGGTENVEGAIEI--------LKSMGDAG----------------- 275
L PN T+S ++ +C +++ +I + D G
Sbjct: 321 LQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEA 380
Query: 276 -------IKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKY 328
+ P+V+++TT I V+ + L EM E+ PN VT + +L+A SK
Sbjct: 381 SRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKL 440
Query: 329 GSVLEVQQCLA 339
V V + A
Sbjct: 441 RHVRRVLEIHA 451
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 73/346 (21%), Positives = 138/346 (39%), Gaps = 66/346 (19%)
Query: 6 RDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLD 65
R + L I+ + + +M N L+ A + +VD A ++ + +K + D
Sbjct: 441 RHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMK--------RRD 492
Query: 66 VFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFE 125
TY++++ F + +MAL V + M G+ ++ ++ I+A A+ G +E L
Sbjct: 493 NITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHL-- 550
Query: 126 EMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIH 185
C+++ F +L S + Y+ K GS+
Sbjct: 551 -----------HCYSV-----------KSGFS-----GAASVLNSLVDMYS---KCGSLE 580
Query: 186 NATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKAL--INEMKTVGLSP 243
+A V F E TP ++N L+ S+ + + AL EM+ P
Sbjct: 581 DAKKV-----------FEE--IATPDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEP 627
Query: 244 NQITWSILIDICGGTENVEGAIEILKSMGDA-GIKPDVIAYTTAIKVCVESKNFKQALTL 302
+ +T+ IL+ C + +E + M I+P V Y + + + ++A +
Sbjct: 628 DSVTFLILLSACSNGRLTDLGLEYFQVMKKIYNIEPQVEHYVHLVGILGRAGRLEEATGV 687
Query: 303 YEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAIYQDMQKAG 348
E M + PN + + TLL+A G+ L++ +DM G
Sbjct: 688 VETM---HLKPNAMIFKTLLRACRYRGN-------LSLGEDMANKG 723
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 116/289 (40%), Gaps = 42/289 (14%)
Query: 3 VNSRDLTY-TLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDM--YKELKHLESV 59
V + D +Y + Y+ M KP++ + L+ AC G L +++ Y +E
Sbjct: 157 VGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSACSAIGAFRLIKEIHSYAFRNLIEPH 216
Query: 60 GRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQ 119
+LK S +++ + V M + + VAWSSLI+A A G E
Sbjct: 217 PQLK------SGLVEAYGRCGSIVYVQLVFDSME----DRDVVAWSSLISAYALHGDAES 266
Query: 120 AIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNL 179
A++ F+EM LA P+ F +L AC A D A +F +M G +G L
Sbjct: 267 ALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYF-----KRMQGDYG------L 315
Query: 180 KQGSIHNATTVPNGFSNSQILSFTERF----------PFTPTTSTYNTLLKACGSDYYHA 229
+ H + V +LS RF P PT T+ LL AC +
Sbjct: 316 RASKDHYSCLV-------DVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGEIE 368
Query: 230 KALINEMKTVGLSP-NQITWSILIDICGGTENVEGAIEILKSMGDAGIK 277
A I + + + P N + +L I E A + M ++G+K
Sbjct: 369 LAEIAARELLMVEPENPANYVLLGKIYMSVGRQEEAERLRLKMKESGVK 417
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 75/306 (24%), Positives = 132/306 (43%), Gaps = 35/306 (11%)
Query: 11 TLNIY-QIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKL-DVFT 68
LN++ Q+ + L D +++ LK+C A R L + H SV L + F
Sbjct: 31 ALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSV-----HAHSVKSNFLSNPFV 85
Query: 69 YSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEML 128
++ ++ A K+ ++ N V W+++I+ H G V++A++L+E M
Sbjct: 86 GCALLDMYGKCLSVSHARKLFDEIP----QRNAVVWNAMISHYTHCGKVKEAVELYEAM- 140
Query: 129 LAGCEPNTQCFNIILHACV--EACQYDRAFRFFHSWKGNKMLGSFGEGYNSNL-KQGSIH 185
PN FN I+ V E Y RA F+ KM+ F + NL ++
Sbjct: 141 --DVMPNESSFNAIIKGLVGTEDGSY-RAIEFY-----RKMI-EFR--FKPNLITLLALV 189
Query: 186 NATTVPNGFS-NSQILSFTERFPFTPTTSTYNTLLKA---CGSDYYHAKALINEMKTVGL 241
+A + F +I S+ R P + L++A CGS Y + + + M+
Sbjct: 190 SACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVY-VQLVFDSME---- 244
Query: 242 SPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALT 301
+ + WS LI + E A++ + M A + PD IA+ +K C + +AL
Sbjct: 245 DRDVVAWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALV 304
Query: 302 LYEEMK 307
++ M+
Sbjct: 305 YFKRMQ 310
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/343 (21%), Positives = 140/343 (40%), Gaps = 45/343 (13%)
Query: 5 SRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKL 64
S DL + L +++ M ++ D++ N ++ G +D A+ ++ E+ +SV
Sbjct: 247 SSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSV----- 301
Query: 65 DVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLF 124
TY II + L + A+ + +M S G++ W+++I+ E+ I F
Sbjct: 302 ---TYGAIISGYMAHGLVKEAMALFSEMESIGLS----TWNAMISGLMQNNHHEEVINSF 354
Query: 125 EEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSI 184
EM+ G PNT + L + + + Y + KG K + +F N +I
Sbjct: 355 REMIRCGSRPNT----VTLSSLLPSLTYSS------NLKGGKEIHAFA---IRNGADNNI 401
Query: 185 HNATTVPNGFSNSQILSFTER----------FPFTPTTSTYNTLLKACGSDYYHAKALIN 234
+ T++ + ++ L +R +T + Y A D A +L +
Sbjct: 402 YVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAY-----AVHGDSDSACSLFD 456
Query: 235 EMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSM-GDAGIKPDVIAYTTAIKVCVES 293
+M+ +G P+ +T + ++ + + + A I SM I+P V Y + V +
Sbjct: 457 QMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRA 516
Query: 294 KNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQ 336
A+ +M I P + LL S G LE+ +
Sbjct: 517 GKLSDAMEFISKMP---IDPIAKVWGALLNGASVLGD-LEIAR 555
>AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:172256-174137 FORWARD
LENGTH=577
Length = 577
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 77/150 (51%), Gaps = 20/150 (13%)
Query: 2 NVNSRDLTYTLNIYQIMQ------------NLGLKPDMTSYNILLKACCVAGRVDLAQDM 49
+V +RD+ NIY I++ +LG++ D N +LKA + L +
Sbjct: 54 SVYTRDIVS--NIYNILKYSNWDSAQEQLPHLGVRWDSHIINRVLKAHPPMQKAWLFFNW 111
Query: 50 YKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLIN 109
++K K D FTY+T++ +F +A Q V H M+ GV ++TV ++SLI+
Sbjct: 112 AAQIKGF------KHDHFTYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIH 165
Query: 110 ACAHAGLVEQAIQLFEEMLLAGCEPNTQCF 139
+ +G V+ A++L+EEM GCEP +
Sbjct: 166 WVSSSGDVDGAMRLWEEMRDNGCEPTVVSY 195
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 69/137 (50%), Gaps = 5/137 (3%)
Query: 214 TYNTLLKACGS--DYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSM 271
TY T+L G ++ + MK G+ + +T++ LI + +V+GA+ + + M
Sbjct: 124 TYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDVDGAMRLWEEM 183
Query: 272 GDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSV 331
D G +P V++YT +K+ ++A +Y+EM + PN TY L++ G
Sbjct: 184 RDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTYTVLMEYLVATG-- 241
Query: 332 LEVQQCLAIYQDMQKAG 348
+ ++ L I+ MQ+ G
Sbjct: 242 -KCEEALDIFFKMQEIG 257
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 66/138 (47%), Gaps = 4/138 (2%)
Query: 22 GLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKL 81
G K D +Y +L AGR+ Q MY ++ G L +D TY+++I + +
Sbjct: 117 GFKHDHFTYTTMLDIFGEAGRI---QSMYSVFHLMKEKGVL-IDTVTYTSLIHWVSSSGD 172
Query: 82 WQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNI 141
A+++ +MR G V++++ + G VE+A ++++EML + PN + +
Sbjct: 173 VDGAMRLWEEMRDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTYTV 232
Query: 142 ILHACVEACQYDRAFRFF 159
++ V + + A F
Sbjct: 233 LMEYLVATGKCEEALDIF 250
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/305 (21%), Positives = 118/305 (38%), Gaps = 61/305 (20%)
Query: 7 DLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDV 66
DLT ++ GL D+ + N L++ + +D A ++ E + DV
Sbjct: 132 DLTLVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDE--------NPQRDV 183
Query: 67 FTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEE 126
TY+ +I A+ A ++ M + V+W+SLI+ A +AI+LF+E
Sbjct: 184 VTYNVLIDGLVKAREIVRARELFDSMPLR----DLVSWNSLISGYAQMNHCREAIKLFDE 239
Query: 127 MLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHN 186
M+ G +P+ L AC ++ W+ K +IH+
Sbjct: 240 MVALGLKPDNVAIVSTLSACAQS----------GDWQKGK----------------AIHD 273
Query: 187 ATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKALIN-EMKTVGLSPNQ 245
T F +S L D+Y I+ M+ L ++
Sbjct: 274 YTKRKRLFIDS--------------------FLATGLVDFYAKCGFIDTAMEIFELCSDK 313
Query: 246 --ITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLY 303
TW+ +I N E ++ + M +GIKPD + + + + C S +A L+
Sbjct: 314 TLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLVDEARNLF 373
Query: 304 EEMKS 308
++M+S
Sbjct: 374 DQMRS 378
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/338 (20%), Positives = 146/338 (43%), Gaps = 45/338 (13%)
Query: 14 IYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTII 73
+Y++M++ G+KPD + L+ +C + G ++ ++ Y+ +K L++ + + ++
Sbjct: 244 VYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKE----NGLRMTIPLVNALM 299
Query: 74 KVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCE 133
+F+ A ++ ++ + V+W+++I+ A GL++ + +LF++M E
Sbjct: 300 DMFSKCGDIHEARRIFDNLEKRTI----VSWTTMISGYARCGLLDVSRKLFDDME----E 351
Query: 134 PNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNG 193
+ +N ++ V+A +G L F E SN K I T +
Sbjct: 352 KDVVLWNAMIGGSVQA------------KRGQDALALFQEMQTSNTKPDEI---TMIHCL 396
Query: 194 FSNSQ---------ILSFTERFPFTPTTSTYNTLLKACGSDYYHAKALINEMKTV--GL- 241
+ SQ I + E++ + + +L+ D Y I+E +V G+
Sbjct: 397 SACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLV-----DMYAKCGNISEALSVFHGIQ 451
Query: 242 SPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALT 301
+ N +T++ +I + AI M DAGI PD I + + C +
Sbjct: 452 TRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRD 511
Query: 302 LYEEMKS-CEIHPNWVTYNTLLKARSKYGSVLEVQQCL 338
+ +MKS ++P Y+ ++ + G + E + +
Sbjct: 512 YFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLM 549
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 71/359 (19%), Positives = 148/359 (41%), Gaps = 85/359 (23%)
Query: 5 SRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKE-LKHLESVGRLK 63
SR L Y++ I + ++N P++ S+N+ ++ + + +YK+ L+H +
Sbjct: 100 SRYLDYSVKILKGIEN----PNIFSWNVTIRGFSESENPKESFLLYKQMLRH--GCCESR 153
Query: 64 LDVFTYSTIIKVFADAKL-----------WQMALKVKHDMRSAGVNL------------- 99
D FTY + KV AD +L ++ L++ + +A +++
Sbjct: 154 PDHFTYPVLFKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKV 213
Query: 100 -------NTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQY 152
+ V+W+ LIN G E+AI +++ M G +P+ ++ + V +C
Sbjct: 214 FDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPD----DVTMIGLVSSCS- 268
Query: 153 DRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPFTPTT 212
MLG +L +G NG + P
Sbjct: 269 --------------MLG--------DLNRGKEFYEYVKENGLRMT-----------IPLV 295
Query: 213 STYNTLLKACGSDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMG 272
+ + CG D + A+ + + ++ + ++W+ +I G G +++ + +
Sbjct: 296 NALMDMFSKCG-DIHEARRIFDNLEKRTI----VSWTTMI---SGYARC-GLLDVSRKLF 346
Query: 273 DAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSV 331
D + DV+ + I V++K + AL L++EM++ P+ +T L A S+ G++
Sbjct: 347 DDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGAL 405
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 106/271 (39%), Gaps = 23/271 (8%)
Query: 11 TLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYS 70
L ++Q MQ KPD + L AC G +D+ +++ ++ L L+V +
Sbjct: 373 ALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYS----LSLNVALGT 428
Query: 71 TIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLA 130
+++ ++A AL V H +++ N++ ++++I A G AI F EM+ A
Sbjct: 429 SLVDMYAKCGNISEALSVFHGIQTR----NSLTYTAIIGGLALHGDASTAISYFNEMIDA 484
Query: 131 GCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTV 190
G P+ F +L AC +F K L N LK SI
Sbjct: 485 GIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNL-------NPQLKHYSIMVDLLG 537
Query: 191 PNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKALINE---MKTVGLSPNQIT 247
G + E P + + LL C H + E K + L P+
Sbjct: 538 RAGLL-EEADRLMESMPMEADAAVWGALLFGC---RMHGNVELGEKAAKKLLELDPSDSG 593
Query: 248 WSILIDICGGTENV-EGAIEILKSMGDAGIK 277
+L+D G N+ E A + M + G++
Sbjct: 594 IYVLLDGMYGEANMWEDAKRARRMMNERGVE 624
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/288 (20%), Positives = 112/288 (38%), Gaps = 74/288 (25%)
Query: 100 NTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIIL-----------HACVE 148
N V+W+++I+ E+A+ LF EM G PN +++IL HA V
Sbjct: 361 NVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSEVHAQVV 420
Query: 149 ACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQGSIHNATTVPNGFSNSQILSFTERFPF 208
Y+R+ S G +L ++ +K G + A V +G + I++++
Sbjct: 421 KTNYERS-----STVGTALLDAY-------VKLGKVEEAAKVFSGIDDKDIVAWSAMLAG 468
Query: 209 TPTTSTYNTLLKACGSDYYHAKALINEMKTVGLSPNQITWSILIDICGGTE--------- 259
T +K G E+ G+ PN+ T+S ++++C T
Sbjct: 469 YAQTGETEAAIKMFG-----------ELTKGGIKPNEFTFSSILNVCAATNASMGQGKQF 517
Query: 260 ---------------------------NVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVE 292
N+E A E+ K + D++++ + I +
Sbjct: 518 HGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQRE----KDLVSWNSMISGYAQ 573
Query: 293 SKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSVLEVQQCLAI 340
+AL +++EMK ++ + VT+ + A + G V E ++ I
Sbjct: 574 HGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDI 621
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 68/136 (50%), Gaps = 14/136 (10%)
Query: 12 LNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDL-AQDMYKELKHLESVGRLKLDVFTYS 70
++++ M+ G++P+ +Y+++L A V ++ AQ + + +VG LD Y
Sbjct: 382 VDLFSEMKRKGVRPNEFTYSVILTALPVISPSEVHAQVVKTNYERSSTVGTALLD--AYV 439
Query: 71 TIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLA 130
+ KV AK++ S + + VAWS+++ A G E AI++F E+
Sbjct: 440 KLGKVEEAAKVF-----------SGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKG 488
Query: 131 GCEPNTQCFNIILHAC 146
G +PN F+ IL+ C
Sbjct: 489 GIKPNEFTFSSILNVC 504
>AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23488884-23489530 REVERSE
LENGTH=189
Length = 189
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 69/130 (53%), Gaps = 11/130 (8%)
Query: 212 TSTYNTLLKAC--GSDYYHAKALINEMKTVGLSPNQITWSILID-IC--GGTEN------ 260
T TY TL++ D A+ + EM + G+ P+ +T++IL+D +C G E
Sbjct: 16 TVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLCKNGKLEKALVAGK 75
Query: 261 VEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNT 320
VE ++ S+ G+KP+V+ YTT I + ++A TL+ +MK P+ TYNT
Sbjct: 76 VEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMKEDGPLPDSGTYNT 135
Query: 321 LLKARSKYGS 330
L++A + G
Sbjct: 136 LIRAHLRDGD 145
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 76/370 (20%), Positives = 150/370 (40%), Gaps = 84/370 (22%)
Query: 21 LGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAK 80
+ L+ D+T N+L+ A G V+LA+ ++ G L+ + +++T+I ++ +
Sbjct: 90 IDLEGDVTLLNVLINAYSKCGFVELARQVFD--------GMLERSLVSWNTMIGLYTRNR 141
Query: 81 LWQMALKVKHDMRSAGVNLNTVAWSSLINAC----------------------------- 111
+ AL + +MR+ G + SS+++AC
Sbjct: 142 MESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGT 201
Query: 112 ------AHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFH----- 160
A G+++ A+Q+FE M + ++ ++ ++ V+ Y+ A +
Sbjct: 202 ALLDLYAKCGMIKDAVQVFESMQ----DKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRM 257
Query: 161 SWKGNKMLGSFGEGYNSNLK---QGSIHNATTVPNGFSNSQIL------------SFTER 205
S + N+ S SNL +G +A +GF ++ + S E
Sbjct: 258 SLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRES 317
Query: 206 FPF-----TPTTSTYNTLLKACGSDYYHAKA-----LINEMKTVGLSPNQITWSILIDIC 255
+ +NT++ HA+ L +M+ G+ PN++T+S L+ +C
Sbjct: 318 YIIFSEVQEKNLELWNTIISGFAK---HARPKEVMILFEKMQQDGMHPNEVTFSSLLSVC 374
Query: 256 GGTENVEGAIEILKSMGDA-GIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPN 314
G T VE K M G+ P+V+ Y+ + + + +A YE +KS P
Sbjct: 375 GHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEA---YELIKSIPFDPT 431
Query: 315 WVTYNTLLKA 324
+ +LL +
Sbjct: 432 ASIWGSLLAS 441
>AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27598106-27599812 FORWARD
LENGTH=568
Length = 568
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/321 (19%), Positives = 130/321 (40%), Gaps = 22/321 (6%)
Query: 24 KPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLWQ 83
+P++ ++N+LL A C G V + + + ++H R+K D T++ + + + +
Sbjct: 231 QPEINAFNMLLDALCKCGLVKEGEALLRRMRH-----RVKPDANTFNVLFFGWCRVRDPK 285
Query: 84 MALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCE---PNTQCFN 140
A+K+ +M AG + + I+ AG+V++A LF+ M+ G P + F
Sbjct: 286 KAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFA 345
Query: 141 IILHACVEACQYDRAFRFFHSWKGNKML---GSFGEGYNSNLKQGSIHNATTVPNGFSNS 197
+++ A + + + F L ++ + + A + SN
Sbjct: 346 LMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNK 405
Query: 198 QILSFTERFPFTPTTSTYNTLLKACGSDYYHAKAL--INEMKTVGLSPNQITWSILIDIC 255
+ P TYN L+ + +AL M +P+ T+++LI +
Sbjct: 406 G---------YPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMF 456
Query: 256 GGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNW 315
++ +GA M DV Y I + K+A L EE+ + + +
Sbjct: 457 FEMDDPDGAFNTWTEMDKRDCVQDVETYCAMINGLFDCHRAKEACFLLEEVVNKGLKLPY 516
Query: 316 VTYNTLLKARSKYGSVLEVQQ 336
+++ L S+ G++ + +
Sbjct: 517 RVFDSFLMRLSEVGNLKAIHK 537
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 80/369 (21%), Positives = 142/369 (38%), Gaps = 92/369 (24%)
Query: 24 KPDMTSYNILLKACCVAGRVDLAQ----------------------DMYKELKHLESVGR 61
KPD S+ +L C G V + DMY + S +
Sbjct: 67 KPDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANK 126
Query: 62 LKLDV-------FTYSTIIKVFADAKLWQMALKVKHDM--RSAGVNLNTVAWSSLINACA 112
+ D+ T+ +++ + +A+ ++ AL V +M R A AW+ +I+ A
Sbjct: 127 VFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVA------FAWNIMISGHA 180
Query: 113 HAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFG 172
H G +E + LF+EML + +P+ F+ +++AC
Sbjct: 181 HCGKLESCLSLFKEMLESEFKPDCYTFSSLMNAC-------------------------- 214
Query: 173 EGYNSNLKQGSIHNATTVPNGFSNS-----QILSFTERFPFTP------------TTSTY 215
+SN+ G + +A + NG+S++ +LSF + T ++
Sbjct: 215 SADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELESIEVLTQVSW 274
Query: 216 NTLLKACGSDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAG 275
N+++ AC KAL E+ + N +TW+ +I G + E A+ M +G
Sbjct: 275 NSIIDACMKIGETEKAL--EVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSG 332
Query: 276 IKPDVIAYTTAIKVCVESKNFKQALTLYEEM-KSCEIHPNWVTY----NTLLKARSKYGS 330
+ D AY + C AL + +M C IH + Y N L+ +K G
Sbjct: 333 VDSDHFAYGAVLHACS-----GLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGD 387
Query: 331 VLEVQQCLA 339
+ E +
Sbjct: 388 IKEADRAFG 396
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/307 (20%), Positives = 127/307 (41%), Gaps = 37/307 (12%)
Query: 12 LNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYST 71
+ +Y M ++G+KPD+ ++ +L AC ++ + ++ + S RL+ D S
Sbjct: 395 VEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSI----SESRLETDELLLSA 450
Query: 72 IIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAG 131
++ +++ + A ++ + + V V+W+ +I+A G +A+ F+EM G
Sbjct: 451 LLDMYSKCGNEKEAFRIFNSIPKKDV----VSWTVMISAYGSHGQPREALYQFDEMQKFG 506
Query: 132 CEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNL----KQGSIHNA 187
+P+ +L AC A D +FF + + E Y+ + + G + A
Sbjct: 507 LKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEA 566
Query: 188 TTV----PNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKA-LINEMKTVGLS 242
+ P N+++LS TL AC H+ I +
Sbjct: 567 YEIIQQTPETSDNAELLS---------------TLFSACCLHLEHSLGDRIARLLVENYP 611
Query: 243 PNQITWSILIDICGGTENVEGAIEILKSMGDAGI--KPDVIAYTTAIKVC---VESKNFK 297
+ T+ +L ++ E+ + A + M + G+ KP + KVC E ++
Sbjct: 612 DDASTYMVLFNLYASGESWDAARRVRLKMKEMGLRKKPGCSWIEMSDKVCHFFAEDRSHL 671
Query: 298 QALTLYE 304
+A +YE
Sbjct: 672 RAENVYE 678
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 104/266 (39%), Gaps = 20/266 (7%)
Query: 60 GRLKLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQ 119
GR+K DVF S+++ ++ + A KV +M S N V W++LI + ++
Sbjct: 234 GRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSR----NVVTWTALIAGYVQSRCFDK 289
Query: 120 AIQLFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNL 179
+ +FEEML + PN + + +L AC R R N + N
Sbjct: 290 GMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSI--------EINT 341
Query: 180 KQGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKA--LINEMK 237
G+ V G IL F ER T+ ++ + Y A L M
Sbjct: 342 TAGTTLIDLYVKCGCLEEAILVF-ERL-HEKNVYTWTAMINGFAAHGYARDAFDLFYTML 399
Query: 238 TVGLSPNQITWSILIDICGGTENVEGAIEILKSM-GDAGIKPDVIAYTTAIKVCVESKNF 296
+ +SPN++T+ ++ C VE + SM G ++P Y + +
Sbjct: 400 SSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLL 459
Query: 297 KQALTLYEEMKSCEIHPNWVTYNTLL 322
++A L E M + P V + L
Sbjct: 460 EEAKALIERMP---MEPTNVVWGALF 482
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/278 (20%), Positives = 110/278 (39%), Gaps = 29/278 (10%)
Query: 3 VNSRDLTYTLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRL 62
V SR + +++ M + P+ + + +L AC G + + ++ + +
Sbjct: 282 VQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIK----NSI 337
Query: 63 KLDVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQ 122
+++ +T+I ++ + A+ V + N W+++IN A G A
Sbjct: 338 EINTTAGTTLIDLYVKCGCLEEAILVFERLHEK----NVYTWTAMINGFAAHGYARDAFD 393
Query: 123 LFEEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNLKQG 182
LF ML + PN F +L AC + R F S KG N++
Sbjct: 394 LFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKG-----------RFNMEPK 442
Query: 183 SIHNATTVPNGFSNSQIL----SFTERFPFTPTTSTYNTLLKAC--GSDYYHAKALINEM 236
+ H A V + F +L + ER P PT + L +C DY K +
Sbjct: 443 ADHYACMV-DLFGRKGLLEEAKALIERMPMEPTNVVWGALFGSCLLHKDYELGKYAAS-- 499
Query: 237 KTVGLSPNQI-TWSILIDICGGTENVEGAIEILKSMGD 273
+ + L P+ +++L ++ ++N + + K M D
Sbjct: 500 RVIKLQPSHSGRYTLLANLYSESQNWDEVARVRKQMKD 537
>AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16091093-16092454 FORWARD
LENGTH=453
Length = 453
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 67/117 (57%), Gaps = 2/117 (1%)
Query: 210 PTTSTYNTLLKA--CGSDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEI 267
P Y +L+ DY A L +E+ +GL+P+ T+++ I+ ++EGA+++
Sbjct: 284 PDLVCYTIVLQGVIADEDYPKADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKM 343
Query: 268 LKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKA 324
+ SM G +P+V+ Y IK V++ + +A TL++EM++ ++ N T++ ++ A
Sbjct: 344 MSSMNKLGSEPNVVTYNILIKALVKAGDLSRAKTLWKEMETNGVNRNSHTFDIMISA 400
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/238 (21%), Positives = 101/238 (42%), Gaps = 16/238 (6%)
Query: 20 NLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADA 79
+G++ + +++ IL+ A C G VD A ++ + + + +L S++ K D+
Sbjct: 172 RMGVRLEESTFGILIDALCRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCK-HKDS 230
Query: 80 KLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCF 139
+ + + D+R + ++ ++ G ++ + + +M EP+ C+
Sbjct: 231 SCFDV-IGYLEDLRKTRFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCY 289
Query: 140 NIILHACVEACQYDRAFRFFHSWKGNKM---LGSFGEGYNSNLKQGSIHNATTVPNGFSN 196
I+L + Y +A + F + + ++ N KQ I A
Sbjct: 290 TIVLQGVIADEDYPKADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGAL-------- 341
Query: 197 SQILSFTERFPFTPTTSTYNTLLKAC--GSDYYHAKALINEMKTVGLSPNQITWSILI 252
+++S + P TYN L+KA D AK L EM+T G++ N T+ I+I
Sbjct: 342 -KMMSSMNKLGSEPNVVTYNILIKALVKAGDLSRAKTLWKEMETNGVNRNSHTFDIMI 398
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 58/127 (45%), Gaps = 4/127 (3%)
Query: 23 LKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESVGRLKLDVFTYSTIIKVFADAKLW 82
++PD+ Y I+L+ A ++ EL L DV+TY+ I
Sbjct: 282 VEPDLVCYTIVLQGVIADEDYPKADKLFDELLLLGLAP----DVYTYNVYINGLCKQNDI 337
Query: 83 QMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNII 142
+ ALK+ M G N V ++ LI A AG + +A L++EM G N+ F+I+
Sbjct: 338 EGALKMMSSMNKLGSEPNVVTYNILIKALVKAGDLSRAKTLWKEMETNGVNRNSHTFDIM 397
Query: 143 LHACVEA 149
+ A +E
Sbjct: 398 ISAYIEV 404
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 67/146 (45%), Gaps = 5/146 (3%)
Query: 208 FTPTTSTYNTLLKAC--GSDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAI 265
F+P Y +++ G +++N+MK + P+ + ++I++ E+ A
Sbjct: 247 FSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIADEDYPKAD 306
Query: 266 EILKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKAR 325
++ + G+ PDV Y I + + + AL + M PN VTYN L+KA
Sbjct: 307 KLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILIKAL 366
Query: 326 SKYGSVLEVQQCLAIYQDMQKAGYVR 351
K G ++ + ++++M+ G R
Sbjct: 367 VKAG---DLSRAKTLWKEMETNGVNR 389
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 74/327 (22%), Positives = 140/327 (42%), Gaps = 43/327 (13%)
Query: 11 TLNIYQIMQNLGLKPDMTSYNILLKAC--CVAGRVDLAQDMYKELKHLESVGRLKLDVFT 68
++ +M++ GL D + L+KAC AG+V + H S+ R +D
Sbjct: 194 VFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVG-------KCVHGVSIRRSFIDQSD 246
Query: 69 Y--STIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLFEE 126
Y ++II ++ +L A K + V+ N V W++LI+ A +A LF +
Sbjct: 247 YLQASIIDMYVKCRLLDNARK----LFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQ 302
Query: 127 MLLAGCEPNTQCFNIILHAC--VEACQYDRAFRFFHSWKGNKM----LGSFGEGYNSNLK 180
ML PN IL +C + + ++ ++ + G +M SF + Y +
Sbjct: 303 MLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMY---AR 359
Query: 181 QGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKAL--INEMKT 238
G+I A TV + ++S +++++ A G + +AL ++MK+
Sbjct: 360 CGNIQMARTVFDMMPERNVIS-------------WSSMINAFGINGLFEEALDCFHKMKS 406
Query: 239 VGLSPNQITWSILIDICGGTENVEGAIEILKSMG-DAGIKPDVIAYTTAIKVCVESKNFK 297
+ PN +T+ L+ C + NV+ + +SM D G+ P+ Y + + +
Sbjct: 407 QNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIG 466
Query: 298 QALTLYEEMKSCEIHPNWVTYNTLLKA 324
+A + + M + P + LL A
Sbjct: 467 EAKSFIDNMP---VKPMASAWGALLSA 490
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 89/222 (40%), Gaps = 36/222 (16%)
Query: 11 TLNIYQIMQNLGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESV------GRLKL 64
++++ M + P+ + +L +C G L+H +SV +++
Sbjct: 296 AFDLFRQMLRESILPNQCTLAAILVSCSSLG----------SLRHGKSVHGYMIRNGIEM 345
Query: 65 DVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLF 124
D +++ I ++A QMA V DM N ++WSS+INA GL E+A+ F
Sbjct: 346 DAVNFTSFIDMYARCGNIQMARTV-FDMMP---ERNVISWSSMINAFGINGLFEEALDCF 401
Query: 125 EEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNL----K 180
+M PN+ F +L AC + ++ F S + + E Y + +
Sbjct: 402 HKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEHYACMVDLLGR 461
Query: 181 QGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKAC 222
G I A SF + P P S + LL AC
Sbjct: 462 AGEIGEAK------------SFIDNMPVKPMASAWGALLSAC 491
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 122/274 (44%), Gaps = 28/274 (10%)
Query: 65 DVFTYSTIIKVFADAKLWQMALKVKHDMRSAGVNLNTVAWSSLINACAHAGLVEQAIQLF 124
DV+ S+++ ++ D+ + A KV +M N V+W+++I+ A V+ ++L+
Sbjct: 154 DVYLGSSLVVLYRDSGEVENAYKVFEEMPER----NVVSWTAMISGFAQEWRVDICLKLY 209
Query: 125 EEMLLAGCEPNTQCFNIILHACVEACQYDRAFRFFHSWKGNKMLGSFGEGYNSNL----K 180
+M + +PN F +L AC + + R H + L S+ NS + K
Sbjct: 210 SKMRKSTSDPNDYTFTALLSACTGSGALGQG-RSVHCQTLHMGLKSYLHISNSLISMYCK 268
Query: 181 QGSIHNATTVPNGFSNSQILSFTERFPFTPTTSTYNTLLKACGSDYYHAKAL-INE--MK 237
G + +A + + FSN ++S +N+++ +A+ + E M
Sbjct: 269 CGDLKDAFRIFDQFSNKDVVS-------------WNSMIAGYAQHGLAMQAIELFELMMP 315
Query: 238 TVGLSPNQITWSILIDICGGTENVEGAIEILKSMGDAGIKPDVIAYTTAIKVCVESKNFK 297
G P+ IT+ ++ C V+ + M + G+KP++ Y+ + + +
Sbjct: 316 KSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKPELNHYSCLVDLLGRFGLLQ 375
Query: 298 QALTLYEEMKSCEIHPNWVTYNTLLKARSKYGSV 331
+AL L E M + PN V + +LL + +G V
Sbjct: 376 EALELIENMP---MKPNSVIWGSLLFSCRVHGDV 406
>AT1G76280.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28618365-28622581 REVERSE
LENGTH=693
Length = 693
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 61/116 (52%), Gaps = 6/116 (5%)
Query: 212 TSTYN----TLLKACGSDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEI 267
T TYN +LL+A +D + MK+ G + T++I+ID C + + A +
Sbjct: 557 TPTYNIVLHSLLEANETDM--VINIFKRMKSCGCPADVATYNIMIDCCSLIHSYKSACAL 614
Query: 268 LKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLK 323
+ M G P + +T +K+ + NF++AL L ++ EIH + ++YNT+L+
Sbjct: 615 VSMMIRDGFSPKAVTFTALMKILLNDANFEEALNLLDQAALEEIHLDVLSYNTILR 670
>AT1G76280.3 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28617948-28622581 REVERSE
LENGTH=801
Length = 801
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 64/124 (51%), Gaps = 6/124 (4%)
Query: 212 TSTYN----TLLKACGSDYYHAKALINEMKTVGLSPNQITWSILIDICGGTENVEGAIEI 267
T TYN +LL+A +D + MK+ G + T++I+ID C + + A +
Sbjct: 553 TPTYNIVLHSLLEANETDM--VINIFKRMKSCGCPADVATYNIMIDCCSLIHSYKSACAL 610
Query: 268 LKSMGDAGIKPDVIAYTTAIKVCVESKNFKQALTLYEEMKSCEIHPNWVTYNTLLKARSK 327
+ M G P + +T +K+ + NF++AL L ++ EIH + ++YNT+L+ +
Sbjct: 611 VSMMIRDGFSPKAVTFTALMKILLNDANFEEALNLLDQAALEEIHLDVLSYNTILRKAFE 670
Query: 328 YGSV 331
G +
Sbjct: 671 KGMI 674